Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00390000008759	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37
Glires	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37	ENSGT00530000063553.b.b
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37	ENSGT00530000063553.b.b
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37	ENSGT00530000063553.b.b
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.a ##37	ENSGT00530000063553.b.b
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.b #37	ENSGT00530000063553.b.b
Rat	MODERN SPECIES	10	Ces1c (ENSRNOG00000069004) #7	Ces1a (ENSRNOG00000039725) #8	Slc6a2 (ENSRNOG00000016311) #9	Lpcat2 (ENSRNOG00000016643) #10	Mmp2 (ENSRNOG00000016695) #11	Irx6 (ENSRNOG00000011037) #12	Irx5 (ENSRNOG00000011180) #13	Irx3 (ENSRNOG00000011533) #14	Fto (ENSRNOG00000011728) #15	Rpgrip1l (ENSRNOG00000011829) #16	Aktip (ENSRNOG00000011956) #17	Rbl2 (ENSRNOG00000012153) #18	Chd9 (ENSRNOG00000049302) #19	Tox3 (ENSRNOG00000028649) #20	ENSRNOG00000069574 #21	Sall1 (ENSRNOG00000013907) #22	Cyld (ENSRNOG00000014048) #23	Nod2 (ENSRNOG00000014124) #24	Snx20 (ENSRNOG00000014202) #25	Nkd1 (ENSRNOG00000014293) #26	Brd7 (ENSRNOG00000014419) #27	Adcy7 (ENSRNOG00000014776) #28	Tent4b (ENSRNOG00000024212) #29	Heatr3 (ENSRNOG00000015459) #30	Cnep1r1 (ENSRNOG00000015534) #31	Zfp423 (ENSRNOG00000014658) #32	LOC680913 (ENSRNOG00000024182) #33	Cbln1 (ENSRNOG00000000010) #34	Rps15a-ps3 (ENSRNOG00000055046) #35	N4bp1 (ENSRNOG00000015121) #36	Siah1 (ENSRNOG00000015143) #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.b #37	ENSGT00530000063553.b.b
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.b #37	ENSGT00860000136300
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.b #37	ENSGT00860000136300
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.b #37	ENSGT00860000136300
spretus	MODERN SPECIES	17	Slc6a2 (MGP_SPRETEiJ_G0032495) #9	Capns2 (MGP_SPRETEiJ_G0032494)	Lpcat2 (MGP_SPRETEiJ_G0032493) #10	Mmp2 (MGP_SPRETEiJ_G0032492) #11	Irx6 (MGP_SPRETEiJ_G0032491) #12	Irx5 (MGP_SPRETEiJ_G0032490) #13	Irx3 (MGP_SPRETEiJ_G0032489) #14	Fto (MGP_SPRETEiJ_G0032488) #15	Rpgrip1l (MGP_SPRETEiJ_G0032487) #16	Aktip (MGP_SPRETEiJ_G0032486) #17	Rbl2 (MGP_SPRETEiJ_G0032485) #18	MGP_SPRETEiJ_G0032484	Chd9 (MGP_SPRETEiJ_G0032483) #19	Tox3 (MGP_SPRETEiJ_G0032482) #20	MGP_SPRETEiJ_G0032481	Sall1 (MGP_SPRETEiJ_G0032480) #22	Cyld (MGP_SPRETEiJ_G0032479) #23	Nod2 (MGP_SPRETEiJ_G0032478) #24	Snx20 (MGP_SPRETEiJ_G0032477) #25	Nkd1 (MGP_SPRETEiJ_G0032476) #26	Brd7 (MGP_SPRETEiJ_G0032475) #27	Adcy7 (MGP_SPRETEiJ_G0032474) #28	Tent4b (MGP_SPRETEiJ_G0032473) #29	Heatr3 (MGP_SPRETEiJ_G0032472) #30	Cnep1r1 (MGP_SPRETEiJ_G0032471) #31	Zfp423 (MGP_SPRETEiJ_G0032470) #32	4933402J07Rik (MGP_SPRETEiJ_G0032469) #33	Cbln1 (MGP_SPRETEiJ_G0032468) #34	N4bp1 (MGP_SPRETEiJ_G0032467) #36	MGP_SPRETEiJ_G0032466	MGP_SPRETEiJ_G0032465 ##37
Steppe mouse	MODERN SPECIES	3333	Mmp2 (ENSMSIG00000022035) #11	Irx6 (ENSMSIG00000022060) #12	ENSMSIG00000022098 #13	ENSMSIG00000022154	Irx3 (ENSMSIG00000022187) #14	Fto (ENSMSIG00000022229) #15	Rpgrip1l (ENSMSIG00000022275) #16	Rbl2 (ENSMSIG00000022400) #18	Aktip (ENSMSIG00000022576) #17	Chd9 (ENSMSIG00000022627) #19	Gm19935 (ENSMSIG00000022743)	ENSMSIG00000022761	Tox3 (ENSMSIG00000022770) #20	ENSMSIG00000022804	ENSMSIG00000022807	Sall1 (ENSMSIG00000022842) #22	Cyld (ENSMSIG00000022860) #23	Nod2 (ENSMSIG00000023038) #24	Snx20 (ENSMSIG00000023092) #25	Nkd1 (ENSMSIG00000023101) #26	Brd7 (ENSMSIG00000023142) #27	Adcy7 (ENSMSIG00000023201) #28
Mouse	MODERN SPECIES	17	Ces1a (ENSMUSG00000071047) #8	Slc6a2 (ENSMUSG00000055368) #9	Capns2 (ENSMUSG00000078144)	Lpcat2 (ENSMUSG00000033192) #10	Mmp2 (ENSMUSG00000031740) #11	Irx6 (ENSMUSG00000031738) #12	Irx5 (ENSMUSG00000031737) #13	Irx3 (ENSMUSG00000031734) #14	Fto (ENSMUSG00000055932) #15	Rpgrip1l (ENSMUSG00000033282) #16	Aktip (ENSMUSG00000031667) #17	Rbl2 (ENSMUSG00000031666) #18	Chd9 (ENSMUSG00000056608) #19	Gm19935 (ENSMUSG00000110332)	Tox3 (ENSMUSG00000043668) #20	Sall1 (ENSMUSG00000031665) #22	Cyld (ENSMUSG00000036712) #23	Nod2 (ENSMUSG00000055994) #24	Snx20 (ENSMUSG00000031662) #25	Nkd1 (ENSMUSG00000031661) #26	Brd7 (ENSMUSG00000031660) #27	Adcy7 (ENSMUSG00000031659) #28	Tent4b (ENSMUSG00000036779) #29	Heatr3 (ENSMUSG00000031657) #30	Cnep1r1 (ENSMUSG00000036810) #31	Zfp423 (ENSMUSG00000045333) #32	4933402J07Rik (ENSMUSG00000069971) #33	Cbln1 (ENSMUSG00000031654) #34	N4bp1 (ENSMUSG00000031652) #36	Siah1a (ENSMUSG00000036840) #37	Lonp2 (ENSMUSG00000047866)
Ryukyu mouse	MODERN SPECIES	17	Ces1a (MGP_CAROLIEiJ_G0031377) #8	Slc6a2 (MGP_CAROLIEiJ_G0031376) #9	Capns2 (MGP_CAROLIEiJ_G0031375)	Lpcat2 (MGP_CAROLIEiJ_G0031374) #10	Mmp2 (MGP_CAROLIEiJ_G0031373) #11	Irx6 (MGP_CAROLIEiJ_G0031372) #12	Irx5 (MGP_CAROLIEiJ_G0031371) #13	Irx3 (MGP_CAROLIEiJ_G0031370) #14	Fto (MGP_CAROLIEiJ_G0031369) #15	Rpgrip1l (MGP_CAROLIEiJ_G0031368) #16	Aktip (MGP_CAROLIEiJ_G0031367) #17	Rbl2 (MGP_CAROLIEiJ_G0031366) #18	MGP_CAROLIEiJ_G0031365	Chd9 (MGP_CAROLIEiJ_G0031364) #19	Tox3 (MGP_CAROLIEiJ_G0031363) #20	Sall1 (MGP_CAROLIEiJ_G0031362) #22	Cyld (MGP_CAROLIEiJ_G0031361) #23	Nod2 (MGP_CAROLIEiJ_G0031360) #24	Snx20 (MGP_CAROLIEiJ_G0031359) #25	Nkd1 (MGP_CAROLIEiJ_G0031358) #26	Brd7 (MGP_CAROLIEiJ_G0031357) #27	Adcy7 (MGP_CAROLIEiJ_G0031356) #28	Tent4b (MGP_CAROLIEiJ_G0031355) #29	Heatr3 (MGP_CAROLIEiJ_G0031354) #30	Cnep1r1 (MGP_CAROLIEiJ_G0031353) #31	Zfp423 (MGP_CAROLIEiJ_G0031352) #32	4933402J07Rik (MGP_CAROLIEiJ_G0031351) #33	Cbln1 (MGP_CAROLIEiJ_G0031350) #34	N4bp1 (MGP_CAROLIEiJ_G0031349) #36	MGP_CAROLIEiJ_G0031348	MGP_CAROLIEiJ_G0031347 ##37
Shrew mouse	MODERN SPECIES	12	Ces1a (MGP_PahariEiJ_G0022976) #8	Slc6a2 (MGP_PahariEiJ_G0022975) #9	Capns2 (MGP_PahariEiJ_G0022974)	Lpcat2 (MGP_PahariEiJ_G0022973) #10	Mmp2 (MGP_PahariEiJ_G0022972) #11	Irx6 (MGP_PahariEiJ_G0022971) #12	Irx5 (MGP_PahariEiJ_G0022970) #13	Irx3 (MGP_PahariEiJ_G0022969) #14	Fto (MGP_PahariEiJ_G0022968) #15	Rpgrip1l (MGP_PahariEiJ_G0022967) #16	Aktip (MGP_PahariEiJ_G0022966) #17	Rbl2 (MGP_PahariEiJ_G0022965) #18	Chd9 (MGP_PahariEiJ_G0022964) #19	MGP_PahariEiJ_G0022963	Tox3 (MGP_PahariEiJ_G0022962) #20	Sall1 (MGP_PahariEiJ_G0022961) #22	Cyld (MGP_PahariEiJ_G0022960) #23	Nod2 (MGP_PahariEiJ_G0022959) #24	Snx20 (MGP_PahariEiJ_G0022958) #25	Nkd1 (MGP_PahariEiJ_G0022957) #26	Brd7 (MGP_PahariEiJ_G0022956) #27	Adcy7 (MGP_PahariEiJ_G0022955) #28	Tent4b (MGP_PahariEiJ_G0022954) #29	Zfp423 (MGP_PahariEiJ_G0022953) #32	4933402J07Rik (MGP_PahariEiJ_G0022952) #33	Cbln1 (MGP_PahariEiJ_G0022951) #34	N4bp1 (MGP_PahariEiJ_G0022950) #36	Siah1a (MGP_PahariEiJ_G0022949) #37	Lonp2 (MGP_PahariEiJ_G0022948)	Abcc12 (MGP_PahariEiJ_G0022947)	Phkb (MGP_PahariEiJ_G0022946)
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.a ##37	ENSGT00530000063553.b.b
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.s #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.a ##37	ENSGT00530000063553.b.b
Chinese hamster chok1gshd	MODERN SPECIES	112	Irx6 (ENSCGRG00001005135) #12	ENSCGRG00001021640	Irx5 (ENSCGRG00001019317) #13	Irx3 (ENSCGRG00001022254) #14	Fto (ENSCGRG00001013545) #15	Rpgrip1l (ENSCGRG00001020196) #16	ENSCGRG00001013457	ENSCGRG00001024361 #17	Rbl2 (ENSCGRG00001012793) #18	Chd9 (ENSCGRG00001016150) #19	ENSCGRG00001012667	Gm19935 (ENSCGRG00001012263)	ENSCGRG00001010471	ENSCGRG00001001946	Tox3 (ENSCGRG00001021816) #20	ENSCGRG00001023314 #22	ENSCGRG00001019423	Cyld (ENSCGRG00001000533) #23	Nod2 (ENSCGRG00001011531) #24	Snx20 (ENSCGRG00001020312) #25	Nkd1 (ENSCGRG00001011787) #26	Brd7 (ENSCGRG00001003449) #27	Adcy7 (ENSCGRG00001014504) #28	Tent4b (ENSCGRG00001023597) #29	Heatr3 (ENSCGRG00001024755) #30	Cnep1r1 (ENSCGRG00001009199) #31	Zfp423 (ENSCGRG00001023063) #32	4933402J07Rik (ENSCGRG00001021069) #33	Cbln1 (ENSCGRG00001018308) #34	N4bp1 (ENSCGRG00001014095) #36	Siah1b (ENSCGRG00001006463) ##37
Golden Hamster	MODERN SPECIES	706	ENSMAUG00000013993	Ces1a (ENSMAUG00000011697) #8	Slc6a2 (ENSMAUG00000004570) #9	Lpcat2 (ENSMAUG00000016612) #10	Mmp2 (ENSMAUG00000010513) #11	Irx6 (ENSMAUG00000009996) #12	Irx5 (ENSMAUG00000007656) #13	Irx3 (ENSMAUG00000017323) #14	Fto (ENSMAUG00000000439) #15	Rpgrip1l (ENSMAUG00000017292) #16	Rbl2 (ENSMAUG00000014633) #18	ENSMAUG00000000526 #19	ENSMAUG00000011087 #19	ENSMAUG00000018971	Tox3 (ENSMAUG00000000550) #20	Sall1 (ENSMAUG00000019093) #22	ENSMAUG00000018753	Cyld (ENSMAUG00000001344) #23	Nod2 (ENSMAUG00000004325) #24	Snx20 (ENSMAUG00000020254) #25	Nkd1 (ENSMAUG00000000515) #26	Brd7 (ENSMAUG00000000695) #27	Adcy7 (ENSMAUG00000005638) #28	Tent4b (ENSMAUG00000018042) #29	Heatr3 (ENSMAUG00000020748) #30	Cnep1r1 (ENSMAUG00000012481) #31	ENSMAUG00000013750	Zfp423 (ENSMAUG00000015448) #32	ENSMAUG00000019410	ENSMAUG00000015721	4933402J07Rik (ENSMAUG00000017355) #33
Cricetinae	ANCESTRAL SPECIES																	ENSGT00940000155938.t #22
Chinese hamster chok1gshd	MODERN SPECIES	66							Gbp2 (ENSCGRG00001023495)	Gbp3 (ENSCGRG00001022090)	Gbp7 (ENSCGRG00001000702)	Gbp5 (ENSCGRG00001014326)	Pdlim5 (ENSCGRG00001025015)	Bmpr1b (ENSCGRG00001019865)	Unc5c (ENSCGRG00001024324)	Pdha2 (ENSCGRG00001012024)	Stpg2 (ENSCGRG00001011952)	ENSCGRG00001006395 #22	Rap1gds1 (ENSCGRG00001017066)	Tspan5 (ENSCGRG00001001260)	ENSCGRG00001000181	Metap1 (ENSCGRG00001002302)	Adh5 (ENSCGRG00001000437)	Adh6b (ENSCGRG00001011022)	ENSCGRG00001012224	Adh6a (ENSCGRG00001013383)	ENSCGRG00001000595	ENSCGRG00001017351	Adh7 (ENSCGRG00001008109)	4930579F01Rik (ENSCGRG00001000415)	Trmt10a (ENSCGRG00001020257)	Mttp (ENSCGRG00001013195)	1110002E22Rik (ENSCGRG00001005404)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f.y.a ##37	ENSGT00530000063553.b.b
Northern American deer mouse	MODERN SPECIES	18	Lpcat2 (ENSPEMG00000024158) #10	Mmp2 (ENSPEMG00000023486) #11	Irx6 (ENSPEMG00000022413) #12	Irx5 (ENSPEMG00000021761) #13	Irx3 (ENSPEMG00000022357) #14	Fto (ENSPEMG00000021137) #15	Rpgrip1l (ENSPEMG00000021815) #16	Aktip (ENSPEMG00000022468) #17	Rbl2 (ENSPEMG00000021671) #18	Chd9 (ENSPEMG00000021464) #19	ENSPEMG00000028298	Gm19935 (ENSPEMG00000026446)	Tox3 (ENSPEMG00000019689) #20	ENSPEMG00000026839	ENSPEMG00000005035	Sall1 (ENSPEMG00000012331) #22	Cyld (ENSPEMG00000011322) #23	Nod2 (ENSPEMG00000016933) #24	Snx20 (ENSPEMG00000015231) #25	Nkd1 (ENSPEMG00000028031) #26	Brd7 (ENSPEMG00000015843) #27	Adcy7 (ENSPEMG00000018675) #28	Tent4b (ENSPEMG00000029372) #29	Heatr3 (ENSPEMG00000016174) #30	Cnep1r1 (ENSPEMG00000017702) #31	ENSPEMG00000002704	Zfp423 (ENSPEMG00000015523) #32	4933402J07Rik (ENSPEMG00000016843) #33	Cbln1 (ENSPEMG00000029511) #34	N4bp1 (ENSPEMG00000016429) #36	Siah1b (ENSPEMG00000008065) ##37
Prairie vole	MODERN SPECIES	98														Tox3 (ENSMOCG00000019988) #20	ENSMOCG00000004921	ENSMOCG00000002231 #22	ENSMOCG00000009848	Nod2 (ENSMOCG00000021721) #24	Snx20 (ENSMOCG00000015078) #25	Nkd1 (ENSMOCG00000019054) #26	Brd7 (ENSMOCG00000022495) #27	Adcy7 (ENSMOCG00000000434) #28	ENSMOCG00000016736	Tent4b (ENSMOCG00000013042) #29	Heatr3 (ENSMOCG00000019132) #30	ENSMOCG00000019184 #31	Zfp423 (ENSMOCG00000002689) #32	4933402J07Rik (ENSMOCG00000020575) #33	Cbln1 (ENSMOCG00000003934) #34	ENSMOCG00000017947	N4bp1 (ENSMOCG00000016652) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	608																ENSNGAG00000014092 #22
Lesser Egyptian jerboa	MODERN SPECIES	114	Ces1a (ENSJJAG00000012358) #8	Slc6a2 (ENSJJAG00000022105) #9	Lpcat2 (ENSJJAG00000001079) #10	Mmp2 (ENSJJAG00000010703) #11	Irx6 (ENSJJAG00000003082) #12	Irx5 (ENSJJAG00000016102) #13	Irx3 (ENSJJAG00000021503) #14	Fto (ENSJJAG00000013186) #15	Rpgrip1l (ENSJJAG00000021992) #16	Aktip (ENSJJAG00000007409) #17	Rbl2 (ENSJJAG00000021032) #18	ENSJJAG00000015741 #19	ENSJJAG00000010948 #19	ENSJJAG00000015094	Tox3 (ENSJJAG00000022737) #20	ENSJJAG00000022677 #22	Cyld (ENSJJAG00000013829) #23	Nod2 (ENSJJAG00000017441) #24	Snx20 (ENSJJAG00000022175) #25	Nkd1 (ENSJJAG00000016347) #26	Brd7 (ENSJJAG00000024144) #27	Adcy7 (ENSJJAG00000010449) #28	Tent4b (ENSJJAG00000015670) #29	Heatr3 (ENSJJAG00000016795) #30	Cnep1r1 (ENSJJAG00000016846) #31	Zfp423 (ENSJJAG00000019328) #32	4933402J07Rik (ENSJJAG00000013910) #33	Cbln1 (ENSJJAG00000021584) #34	N4bp1 (ENSJJAG00000017340) #36	ENSJJAG00000016189 #37	ENSJJAG00000022493
Kangaroo rat	MODERN SPECIES	425	Slc6a2 (ENSDORG00000009330) #9	Capns2 (ENSDORG00000027062)	Lpcat2 (ENSDORG00000013193) #10	ENSDORG00000013188 #11	Irx6 (ENSDORG00000012265) #12	Irx5 (ENSDORG00000005903) #13	Irx3 (ENSDORG00000011798) #14	Fto (ENSDORG00000009325) #15	ENSDORG00000023916	Rpgrip1l (ENSDORG00000009323) #16	Aktip (ENSDORG00000009519) #17	Rbl2 (ENSDORG00000009516) #18	ENSDORG00000008523 #19	ENSDORG00000026215 #19	Tox3 (ENSDORG00000003305) #20	ENSDORG00000004249 #22	Cyld (ENSDORG00000004192) #23	Nod2 (ENSDORG00000026607) #24	ENSDORG00000029324 #25	Nkd1 (ENSDORG00000008529) #26	Brd7 (ENSDORG00000010508) #27	Adcy7 (ENSDORG00000010503) #28	Tent4b (ENSDORG00000000031) #29	Heatr3 (ENSDORG00000004409) #30	ENSDORG00000026472 #31	Zfp423 (ENSDORG00000023772) #32	ENSDORG00000001017 #33	Cbln1 (ENSDORG00000025356) #34	ENSDORG00000024454	N4bp1 (ENSDORG00000002154) #36	ENSDORG00000025633 #37
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.a #7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000154837.f #37
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158564.d ##8	ENSGT00940000158564.c.a.a #7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000154623.j.b	ENSGT00940000154623.i.a	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000154623.j.a	ENSGT00940000154623.i.a	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Long-tailed chinchilla	MODERN SPECIES	140	CES1 (ENSCLAG00000005623)	ENSCLAG00000006039 #8	SLC6A2 (ENSCLAG00000005787) #9	LPCAT2 (ENSCLAG00000004725) #10	MMP2 (ENSCLAG00000004390) #11	IRX6 (ENSCLAG00000008231) #12	IRX5 (ENSCLAG00000009884) #13	IRX3 (ENSCLAG00000013650) #14	FTO (ENSCLAG00000013952) #15	RPGRIP1L (ENSCLAG00000004568) #16	AKTIP (ENSCLAG00000006949) #17	RBL2 (ENSCLAG00000005451) #18	ENSCLAG00000005008	CHD9 (ENSCLAG00000007137) #19	TOX3 (ENSCLAG00000006478) #20	SALL1 (ENSCLAG00000006380) #22	CYLD (ENSCLAG00000010166) #23	NOD2 (ENSCLAG00000009024) #24	SNX20 (ENSCLAG00000008955) #25	NKD1 (ENSCLAG00000008184) #26	BRD7 (ENSCLAG00000007993) #27	ADCY7 (ENSCLAG00000006365) #28	TENT4B (ENSCLAG00000004921) #29	HEATR3 (ENSCLAG00000004335) #30	ENSCLAG00000003975 #31	ZNF423 (ENSCLAG00000007342) #32	ENSCLAG00000011514 #33	CBLN1 (ENSCLAG00000014044) #34	ENSCLAG00000013152	SEC31A (ENSCLAG00000011336)	SCD5 (ENSCLAG00000009253)
Degu	MODERN SPECIES	214													TOX3 (ENSODEG00000003744) #20	ENSODEG00000003720	ENSODEG00000003699	SALL1 (ENSODEG00000003685) #22	CYLD (ENSODEG00000003603) #23	NOD2 (ENSODEG00000003540) #24	SNX20 (ENSODEG00000003520) #25	NKD1 (ENSODEG00000003504) #26	ENSODEG00000018926	BRD7 (ENSODEG00000003460) #27	ADCY7 (ENSODEG00000002761) #28	TENT4B (ENSODEG00000002528) #29	HEATR3 (ENSODEG00000002446) #30	CNEP1R1 (ENSODEG00000002403) #31	ENSODEG00000018831	ZNF423 (ENSODEG00000002057) #32	ENSODEG00000001942 #33	CBLN1 (ENSODEG00000001925) #34	ENSODEG00000002724
Guinea pig	MODERN SPECIES	5	CDC16 (ENSCPOG00000005324)	UPF3A (ENSCPOG00000006824)	ENSCPOG00000032917	SLC6A2 (ENSCPOG00000002271) #9	LPCAT2 (ENSCPOG00000002265) #10	MMP2 (ENSCPOG00000020846) #11	IRX6 (ENSCPOG00000013677) #12	IRX5 (ENSCPOG00000011984) #13	IRX3 (ENSCPOG00000034825) #14	FTO (ENSCPOG00000012935) #15	RPGRIP1L (ENSCPOG00000012922) #16	ENSCPOG00000006523	RBL2 (ENSCPOG00000006507) #18	CHD9 (ENSCPOG00000036544) #19	ENSCPOG00000003093	SALL1 (ENSCPOG00000006564) #22	CYLD (ENSCPOG00000010061) #23	NOD2 (ENSCPOG00000010054) #24	SNX20 (ENSCPOG00000031640) #25	NKD1 (ENSCPOG00000002660) #26	BRD7 (ENSCPOG00000015462) #27	ADCY7 (ENSCPOG00000003271) #28	TENT4B (ENSCPOG00000011799) #29	HEATR3 (ENSCPOG00000013804) #30	CNEP1R1 (ENSCPOG00000036484) #31	ZNF423 (ENSCPOG00000000162) #32	ENSCPOG00000020523 #33	CBLN1 (ENSCPOG00000035039) #34	THAP9 (ENSCPOG00000030627)	SEC31A (ENSCPOG00000007967)	SCD5 (ENSCPOG00000003242)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	26	LPCAT2 (ENSHGLG00000006950) #10	MMP2 (ENSHGLG00000003708) #11	IRX6 (ENSHGLG00000003805) #12	IRX5 (ENSHGLG00000004006) #13	IRX3 (ENSHGLG00000004630) #14	FTO (ENSHGLG00000005386) #15	ENSHGLG00000050695	RPGRIP1L (ENSHGLG00000008154) #16	AKTIP (ENSHGLG00000008426) #17	RBL2 (ENSHGLG00000012893) #18	ENSHGLG00000014938 #19	ENSHGLG00000003452	ENSHGLG00000003522	ENSHGLG00000003699	ENSHGLG00000046400 #20	ENSHGLG00000004288 #22	ENSHGLG00000005762 #23	NOD2 (ENSHGLG00000003967) #24	SNX20 (ENSHGLG00000004254) #25	NKD1 (ENSHGLG00000041852) #26	BRD7 (ENSHGLG00000005800) #27	ADCY7 (ENSHGLG00000006152) #28	TENT4B (ENSHGLG00000004206) #29	HEATR3 (ENSHGLG00000004488) #30	CNEP1R1 (ENSHGLG00000046645) #31	ENSHGLG00000021434	ZNF423 (ENSHGLG00000007674) #32	ENSHGLG00000008302 #33	CBLN1 (ENSHGLG00000039996) #34	ENSHGLG00000014792	ENSHGLG00000045263
Naked mole-rat female	MODERN SPECIES	5	HOXA13 (ENSHGLG00000039960)	EVX1 (ENSHGLG00000005868)	HIBADH (ENSHGLG00000005354)	ENSHGLG00000047390	ENSHGLG00000016256	JAZF1 (ENSHGLG00000049016)	ENSHGLG00000016063	CREB5 (ENSHGLG00000018417)	TRIL (ENSHGLG00000037451)	CPVL (ENSHGLG00000016195)	CHN2 (ENSHGLG00000033880)	ENSHGLG00000017765	PRR15 (ENSHGLG00000047965)	SCRN1 (ENSHGLG00000008257)	FKBP14 (ENSHGLG00000006567)	ENSHGLG00000007305 #22	PLEKHA8 (ENSHGLG00000005404)	ENSHGLG00000011844	MTURN (ENSHGLG00000044384)	ENSHGLG00000016122	ZNRF2 (ENSHGLG00000039084)	ENSHGLG00000032561	GGCT (ENSHGLG00000034422)	GARS1 (ENSHGLG00000016342)	CRHR2 (ENSHGLG00000018699)	ENSHGLG00000049417	INMT (ENSHGLG00000035929)	MINDY4 (ENSHGLG00000004247)	AQP1 (ENSHGLG00000045736)	ENSHGLG00000035477	ADCYAP1R1 (ENSHGLG00000005424)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000175746.a.a
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000175746.a.a.a
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #8	ENSGT00940000158960 #9	ENSGT01030000234574.A.b.a.a #10	ENSGT00940000158511 #11	ENSGT00940000159909 #12	ENSGT00940000159483 #13	ENSGT00940000161299 #14	ENSGT00390000017730 #15	ENSGT00520000055620.B #16	ENSGT00390000010125 #17	ENSGT00950000183202.a.b #18	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #27	ENSGT00940000159096 #28	ENSGT00940000158301 #29	ENSGT00960000190798	ENSGT00390000012529 #30	ENSGT00390000008576 #31	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #36	ENSGT00940000175746.a.a.a
Arctic ground squirrel	MODERN SPECIES	99	ENSUPAG00010015119 #7	ENSUPAG00010014531 #8	SLC6A2 (ENSUPAG00010014487) #9	LPCAT2 (ENSUPAG00010014437) #10	MMP2 (ENSUPAG00010014403) #11	IRX6 (ENSUPAG00010014372) #12	IRX5 (ENSUPAG00010014365) #13	IRX3 (ENSUPAG00010014349) #14	FTO (ENSUPAG00010014295) #15	RPGRIP1L (ENSUPAG00010014243) #16	AKTIP (ENSUPAG00010014223) #17	RBL2 (ENSUPAG00010014149) #18	CHD9 (ENSUPAG00010014099) #19	CHD9NB (ENSUPAG00010014093)	TOX3 (ENSUPAG00010014088) #20	SALL1 (ENSUPAG00010014078) #22	CYLD (ENSUPAG00010013856) #23	NOD2 (ENSUPAG00010013810) #24	SNX20 (ENSUPAG00010013805) #25	NKD1 (ENSUPAG00010013779) #26	ENSUPAG00010013770	BRD7 (ENSUPAG00010013735) #27	ADCY7 (ENSUPAG00010013680) #28	TENT4B (ENSUPAG00010013654) #29	ENSUPAG00010013643	ENSUPAG00010013639	HEATR3 (ENSUPAG00010013623) #30	CNEP1R1 (ENSUPAG00010013602) #31
Squirrel	MODERN SPECIES	75	ENSSTOG00000022544 #7	ENSSTOG00000011565 #7	ENSSTOG00000027091 #8	SLC6A2 (ENSSTOG00000011549) #9	LPCAT2 (ENSSTOG00000011536) #10	MMP2 (ENSSTOG00000022615) #11	IRX6 (ENSSTOG00000015121) #12	IRX5 (ENSSTOG00000023408) #13	IRX3 (ENSSTOG00000019902) #14	FTO (ENSSTOG00000023410) #15	RPGRIP1L (ENSSTOG00000012672) #16	AKTIP (ENSSTOG00000008656) #17	RBL2 (ENSSTOG00000008636) #18	CHD9 (ENSSTOG00000022273) #19	TOX3 (ENSSTOG00000009587) #20	SALL1 (ENSSTOG00000020885) #22	CYLD (ENSSTOG00000010194) #23	NOD2 (ENSSTOG00000025139) #24	SNX20 (ENSSTOG00000031296) #25	NKD1 (ENSSTOG00000027729) #26	BRD7 (ENSSTOG00000024547) #27	ADCY7 (ENSSTOG00000001199) #28	ENSSTOG00000001196 #29	HEATR3 (ENSSTOG00000001183) #30	CNEP1R1 (ENSSTOG00000001179) #31	ZNF423 (ENSSTOG00000028569) #32	ENSSTOG00000005303 #33	CBLN1 (ENSSTOG00000027557) #34	N4BP1 (ENSSTOG00000006205) #36	SIAH1 (ENSSTOG00000008805) #37	LONP2 (ENSSTOG00000008780)
Alpin marmot	MODERN SPECIES	23	ENSMMMG00000011414 #7	ENSMMMG00000011513 #8	SLC6A2 (ENSMMMG00000011536) #9	LPCAT2 (ENSMMMG00000011587) #10	MMP2 (ENSMMMG00000011634) #11	IRX6 (ENSMMMG00000011652) #12	IRX5 (ENSMMMG00000011673) #13	IRX3 (ENSMMMG00000011681) #14	FTO (ENSMMMG00000011704) #15	RPGRIP1L (ENSMMMG00000011727) #16	AKTIP (ENSMMMG00000011767) #17	RBL2 (ENSMMMG00000011833) #18	CHD9 (ENSMMMG00000012811) #19	CHD9NB (ENSMMMG00000012935)	TOX3 (ENSMMMG00000012986) #20	SALL1 (ENSMMMG00000013047) #22	CYLD (ENSMMMG00000013093) #23	NOD2 (ENSMMMG00000013415) #24	SNX20 (ENSMMMG00000013445) #25	NKD1 (ENSMMMG00000013451) #26	BRD7 (ENSMMMG00000013473) #27	ADCY7 (ENSMMMG00000013505) #28	ENSMMMG00000014304 #29	HEATR3 (ENSMMMG00000014311) #30	CNEP1R1 (ENSMMMG00000014341) #31	ZNF423 (ENSMMMG00000014383) #32	ENSMMMG00000014403 #33	CBLN1 (ENSMMMG00000014438) #34	N4BP1 (ENSMMMG00000014453) #36	ENSMMMG00000014456	ENSMMMG00000014468
Eurasian red squirrel	MODERN SPECIES	8	SLC6A2 (ENSSVLG00005025519) #9	LPCAT2 (ENSSVLG00005025612) #10	MMP2 (ENSSVLG00005025625) #11	IRX6 (ENSSVLG00005025641) #12	IRX5 (ENSSVLG00005025650) #13	IRX3 (ENSSVLG00005025657) #14	FTO (ENSSVLG00005025671) #15	ENSSVLG00005025681	RPGRIP1L (ENSSVLG00005025692) #16	ENSSVLG00005025703 #17	RBL2 (ENSSVLG00005025712) #18	CHD9 (ENSSVLG00005025759) #19	CHD9NB (ENSSVLG00005025793)	ENSSVLG00005025795	TOX3 (ENSSVLG00005025797) #20	SALL1 (ENSSVLG00005025799) #22	CYLD (ENSSVLG00005025804) #23	NOD2 (ENSSVLG00005025812) #24	SNX20 (ENSSVLG00005025820) #25	NKD1 (ENSSVLG00005025829) #26	ENSSVLG00005025838 #27	ADCY7 (ENSSVLG00005025857) #28	TENT4B (ENSSVLG00005025875) #29	HEATR3 (ENSSVLG00005025878) #30	ENSSVLG00005025884 #31	ENSSVLG00005025890	ENSSVLG00005025893	ENSSVLG00005025899	ZNF423 (ENSSVLG00005016875) #32	ENSSVLG00005016966 #33	CBLN1 (ENSSVLG00005017023) #34
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000155938 #22
Pika	MODERN SPECIES	5829																SALL1 (ENSOPRG00000005645) #22
Tree shrew	MODERN SPECIES	7676																ENSTBEG00000002119 #22