Amniota	ANCESTRAL SPECIES	25	ENSGT00940000157672	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Mammalia	ANCESTRAL SPECIES	62			ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Theria	ANCESTRAL SPECIES	17	ENSGT00940000155883.a.a	ENSGT00940000154623	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000154623	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00390000008759	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00390000008759	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Equus	ANCESTRAL SPECIES	20	ENSGT00940000158564.j.a.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B.b #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682.l #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Horse	MODERN SPECIES	22	ENSECAG00000052050 #7	LPCAT2 (ENSECAG00000009649) #8	MMP2 (ENSECAG00000000953) #9	IRX6 (ENSECAG00000023569) #10	IRX5 (ENSECAG00000023545) #11	ENSECAG00000049674 #12	IRX3 (ENSECAG00000023496) #13	FTO (ENSECAG00000022922) #14	RPGRIP1L (ENSECAG00000022298) #15	AKTIP (ENSECAG00000020381) #16	RBL2 (ENSECAG00000014181) #17	ENSECAG00000050299 #18	CHD9 (ENSECAG00000011505) #19	ENSECAG00000029200 #20	TOX3 (ENSECAG00000011429) #21	SALL1 (ENSECAG00000011334) #22	CYLD (ENSECAG00000007240) #23	NOD2 (ENSECAG00000017005) #24	SNX20 (ENSECAG00000016834) #25	NKD1 (ENSECAG00000015958) #26	ENSECAG00000053051 #27	BRD7 (ENSECAG00000013213) #28	ADCY7 (ENSECAG00000007149) #29	TENT4B (ENSECAG00000040529) #30	HEATR3 (ENSECAG00000000361) #31	ZNF423 (ENSECAG00000000244) #32	C3H16orf78 (ENSECAG00000000159) #33	CBLN1 (ENSECAG00000000034) #34	N4BP1 (ENSECAG00000024238) #35	SIAH1 (ENSECAG00000044655) #36	LONP2 (ENSECAG00000022436) #37
Donkey	MODERN SPECIES	20	SLC6A2 (ENSEASG00005018433)	CAPNS2 (ENSEASG00005023940)	LPCAT2 (ENSEASG00005018306) #8	MMP2 (ENSEASG00005018304) #9	IRX6 (ENSEASG00005018300) #10	IRX5 (ENSEASG00005030004) #11	IRX3 (ENSEASG00005018291) #13	FTO (ENSEASG00005018288) #14	ENSEASG00005018130 #15	ENSEASG00005038205 ##15	AKTIP (ENSEASG00005018060) #16	RBL2 (ENSEASG00005018036) #17	CHD9 (ENSEASG00005014832) #19	CHD9NB (ENSEASG00005026958)	TOX3 (ENSEASG00005014606) #20	SALL1 (ENSEASG00005014602) #22	CYLD (ENSEASG00005014600) #23	NOD2 (ENSEASG00005014576) #24	SNX20 (ENSEASG00005025406) #25	NKD1 (ENSEASG00005014569) #26	BRD7 (ENSEASG00005014566) #28	ADCY7 (ENSEASG00005014561) #29	TENT4B (ENSEASG00005014551) #30	HEATR3 (ENSEASG00005014548) #31	CNEP1R1 (ENSEASG00005014546)	ZNF423 (ENSEASG00005014542) #32	C16orf78 (ENSEASG00005014539) #33	CBLN1 (ENSEASG00005029359) #34	N4BP1 (ENSEASG00005014535) #35	ENSEASG00005032316 #36	LONP2 (ENSEASG00005014532) #37
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a.d #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Megabat	MODERN SPECIES	8097																SALL1 (ENSPVAG00000015374) #22
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a.d #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Microbat	MODERN SPECIES	2079																SALL1 (ENSMLUG00000015541) #22
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010018147 #7	SLC6A2 (ENSRFEG00010018029)	LPCAT2 (ENSRFEG00010017976) #8	MMP2 (ENSRFEG00010017777) #9	IRX6 (ENSRFEG00010017729) #10	IRX5 (ENSRFEG00010017679) #11	IRX3 (ENSRFEG00010017627) #13	ENSRFEG00010017608	FTO (ENSRFEG00010017396) #14	RPGRIP1L (ENSRFEG00010017253) #15	AKTIP (ENSRFEG00010017196) #16	RBL2 (ENSRFEG00010017127) #17	CHD9 (ENSRFEG00010016945) #19	CHD9NB (ENSRFEG00010016917)	TOX3 (ENSRFEG00010016859) #20	SALL1 (ENSRFEG00010016793) #22	CYLD (ENSRFEG00010016753) #23	NOD2 (ENSRFEG00010016709) #24	SNX20 (ENSRFEG00010016632) #25	NKD1 (ENSRFEG00010016587) #26	BRD7 (ENSRFEG00010016521) #28	ADCY7 (ENSRFEG00010016429) #29	TENT4B (ENSRFEG00010016149) #30	HEATR3 (ENSRFEG00010016102) #31	CNEP1R1 (ENSRFEG00010016028)	ZNF423 (ENSRFEG00010015923) #32	C16orf78 (ENSRFEG00010015887) #33	CBLN1 (ENSRFEG00010015814) #34	ENSRFEG00010015754	N4BP1 (ENSRFEG00010015699) #35	SIAH1 (ENSRFEG00010015675) #36
Carnivora	DUPLICATION
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
American mink	MODERN SPECIES	2	CES5A (ENSNVIG00000016697)	ENSNVIG00000016822 #7	SLC6A2 (ENSNVIG00000016880)	LPCAT2 (ENSNVIG00000017057) #8	MMP2 (ENSNVIG00000017094) #9	IRX6 (ENSNVIG00000017145) #10	IRX5 (ENSNVIG00000017154) #11	IRX3 (ENSNVIG00000017164) #13	FTO (ENSNVIG00000017171) #14	FTM (ENSNVIG00000017234) #15	AKTIP (ENSNVIG00000017560) #16	RBL2 (ENSNVIG00000017591) #17	CHD9 (ENSNVIG00000017677) #19	CHD9NB (ENSNVIG00000018148)	TOX3 (ENSNVIG00000018161) #20	SALL1 (ENSNVIG00000018193) #22	CYLD (ENSNVIG00000018201) #23	NOD2 (ENSNVIG00000018277) #24	SNX20 (ENSNVIG00000018295) #25	NKD1 (ENSNVIG00000018300) #26	BRD7 (ENSNVIG00000018322) #28	ADCY7 (ENSNVIG00000018370) #29	TENT4B (ENSNVIG00000018447) #30	HEATR3 (ENSNVIG00000018476) #31	CNEP1R1 (ENSNVIG00000018482)	ZNF423 (ENSNVIG00000018526) #32	ENSNVIG00000018548 #33	CBLN1 (ENSNVIG00000018559) #34	N4BP1 (ENSNVIG00000018575) #35	SIAH1 (ENSNVIG00000018590) #36	LONP2 (ENSNVIG00000018597) #37
Ferret	MODERN SPECIES	174	ENSMPUG00000003424 #7	SLC6A2 (ENSMPUG00000003413)	LPCAT2 (ENSMPUG00000003397) #8	MMP2 (ENSMPUG00000003387) #9	IRX6 (ENSMPUG00000003378) #10	IRX5 (ENSMPUG00000003373) #11	ENSMPUG00000003369	IRX3 (ENSMPUG00000003361) #13	FTO (ENSMPUG00000003354) #14	RPGRIP1L (ENSMPUG00000003338) #15	AKTIP (ENSMPUG00000003331) #16	RBL2 (ENSMPUG00000003315) #17	CHD9 (ENSMPUG00000003285) #19	ENSMPUG00000003279	TOX3 (ENSMPUG00000003272) #20	SALL1 (ENSMPUG00000003265) #22	ENSMPUG00000003260	CYLD (ENSMPUG00000003199) #23	NOD2 (ENSMPUG00000003188) #24	SNX20 (ENSMPUG00000003184) #25	NKD1 (ENSMPUG00000003177) #26	BRD7 (ENSMPUG00000003164) #28	ADCY7 (ENSMPUG00000003154) #29	TENT4B (ENSMPUG00000003121) #30	HEATR3 (ENSMPUG00000003112) #31	CNEP1R1 (ENSMPUG00000003109)	ENSMPUG00000003081	ZNF423 (ENSMPUG00000003075) #32	C16orf78 (ENSMPUG00000003067) #33	CBLN1 (ENSMPUG00000003041) #34	N4BP1 (ENSMPUG00000003034) #35
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.e #36
Giant Panda	MODERN SPECIES	3	SLC6A2 (ENSAMEG00000016488)	LPCAT2 (ENSAMEG00000016449) #8	MMP2 (ENSAMEG00000016417) #9	IRX6 (ENSAMEG00000016415) #10	IRX5 (ENSAMEG00000029574) #11	IRX3 (ENSAMEG00000016409) #13	ENSAMEG00000027895 #14	ENSAMEG00000026555	AKTIP (ENSAMEG00000016345) #16	ENSAMEG00000002818	RBL2 (ENSAMEG00000016277) #17	CHD9 (ENSAMEG00000016232) #19	ENSAMEG00000024543	TOX3 (ENSAMEG00000006831) #20	ENSAMEG00000028098	SALL1 (ENSAMEG00000025292) #22	CYLD (ENSAMEG00000006757) #23	NOD2 (ENSAMEG00000006741) #24	SNX20 (ENSAMEG00000024024) #25	ENSAMEG00000006721 #26	BRD7 (ENSAMEG00000006689) #28	ADCY7 (ENSAMEG00000006564) #29	TENT4B (ENSAMEG00000006535) #30	HEATR3 (ENSAMEG00000006493) #31	CNEP1R1 (ENSAMEG00000006491)	ENSAMEG00000006486	ZNF423 (ENSAMEG00000006481) #32	C16orf78 (ENSAMEG00000006474) #33	CBLN1 (ENSAMEG00000006468) #34	N4BP1 (ENSAMEG00000010288) #35	ENSAMEG00000010284 #36
Ursus	ANCESTRAL SPECIES	26	ENSGT00940000156482	ENSGT00940000155883.a.a	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b.e #17	ENSGT00950000183202.a.b.f #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529.g #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.e #36
American black bear	MODERN SPECIES	36															ENSUAMG00000023379 #22	ENSUAMG00000023381 #22	CYLD (ENSUAMG00000023383) #23
Polar bear	MODERN SPECIES	246	NUDT21 (ENSUMAG00000001344)	AMFR (ENSUMAG00000001363)	ENSUMAG00000001550	CES5A (ENSUMAG00000001619)	ENSUMAG00000001788 #7	SLC6A2 (ENSUMAG00000001816)	LPCAT2 (ENSUMAG00000001955) #8	MMP2 (ENSUMAG00000002100) #9	FTO (ENSUMAG00000002581) #14	RPGRIP1L (ENSUMAG00000002645) #15	AKTIP (ENSUMAG00000002841) #16	RBL2 (ENSUMAG00000002993) #17	ENSUMAG00000003789	CHD9 (ENSUMAG00000004043) #19	TOX3 (ENSUMAG00000005349) #20	ENSUMAG00000005357 #22	CYLD (ENSUMAG00000005408) #23	NOD2 (ENSUMAG00000005890) #24	ENSUMAG00000005926 #25	NKD1 (ENSUMAG00000005931) #26	BRD7 (ENSUMAG00000005986) #28	ADCY7 (ENSUMAG00000006160) #29	TENT4B (ENSUMAG00000006309) #30	HEATR3 (ENSUMAG00000006385) #31	CNEP1R1 (ENSUMAG00000006630)	ENSUMAG00000006646	ENSUMAG00000006664 #32	ENSUMAG00000006675 #33	CBLN1 (ENSUMAG00000006680) #34	N4BP1 (ENSUMAG00000006688) #35	ENSUMAG00000006693 #36
Canidae	ANCESTRAL SPECIES	14	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00940000168933	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000155883.a.a	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00940000168933	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Dingo	MODERN SPECIES	41	ENSCAFG00020004339	ENSCAFG00020004334 #7	SLC6A2 (ENSCAFG00020004230)	LPCAT2 (ENSCAFG00020004051) #8	MMP2 (ENSCAFG00020003742) #9	IRX6 (ENSCAFG00020003712) #10	IRX5 (ENSCAFG00020003703) #11	IRX3 (ENSCAFG00020003699) #13	FTO (ENSCAFG00020003690) #14	RPGRIP1L (ENSCAFG00020003432) #15	AKTIP (ENSCAFG00020003392) #16	RBL2 (ENSCAFG00020003057) #17	ENSCAFG00020003037	CHD9 (ENSCAFG00020002879) #19	TOX3 (ENSCAFG00020002858) #20	SALL1 (ENSCAFG00020002842) #22	ENSCAFG00020002827	CYLD (ENSCAFG00020001785) #23	NOD2 (ENSCAFG00020001497) #24	SNX20 (ENSCAFG00020001482) #25	NKD1 (ENSCAFG00020001437) #26	BRD7 (ENSCAFG00020001425) #28	ADCY7 (ENSCAFG00020001134) #29	TENT4B (ENSCAFG00020000987) #30	ENSCAFG00020000975	HEATR3 (ENSCAFG00020000624) #31	CNEP1R1 (ENSCAFG00020000556)	ZNF423 (ENSCAFG00020000541) #32	C16orf78 (ENSCAFG00020000518) #33	CBLN1 (ENSCAFG00020000480) #34	N4BP1 (ENSCAFG00020000467) #35
Dog	MODERN SPECIES	11	GNAO1 (ENSCAFG00845000319)	ENSCAFG00845000373	CES1 (ENSCAFG00845000453) #7	SLC6A2 (ENSCAFG00845000709)	LPCAT2 (ENSCAFG00845000815) #8	MMP2 (ENSCAFG00845000865) #9	IRX6 (ENSCAFG00845000989) #10	IRX5 (ENSCAFG00845001045) #11	IRX3 (ENSCAFG00845001072) #13	FTO (ENSCAFG00845002069) #14	RPGRIP1L (ENSCAFG00845003370) #15	AKTIP (ENSCAFG00845003411) #16	RBL2 (ENSCAFG00845003441) #17	CHD9 (ENSCAFG00845003529) #19	TOX3 (ENSCAFG00845003688) #20	SALL1 (ENSCAFG00845003739) #22	ENSCAFG00845003751	CYLD (ENSCAFG00845003806) #23	NOD2 (ENSCAFG00845003875) #24	SNX20 (ENSCAFG00845003924) #25	NKD1 (ENSCAFG00845003953) #26	BRD7 (ENSCAFG00845003994) #28	ADCY7 (ENSCAFG00845004089) #29	TENT4B (ENSCAFG00845004208) #30	HEATR3 (ENSCAFG00845004241) #31	ENSCAFG00845004273	CNEP1R1 (ENSCAFG00845004308)	ENSCAFG00845004320	ENSCAFG00845004326	ZNF423 (ENSCAFG00845004378) #32	C2H16orf78 (ENSCAFG00845004423) #33
Red fox	MODERN SPECIES	87	CES1 (ENSVVUG00000021742) #7	SLC6A2 (ENSVVUG00000020241)	LPCAT2 (ENSVVUG00000020204) #8	MMP2 (ENSVVUG00000019637) #9	ENSVVUG00000019604	IRX6 (ENSVVUG00000019600) #10	IRX5 (ENSVVUG00000019591) #11	IRX3 (ENSVVUG00000019559) #13	FTO (ENSVVUG00000019536) #14	RPGRIP1L (ENSVVUG00000019516) #15	AKTIP (ENSVVUG00000019466) #16	RBL2 (ENSVVUG00000019450) #17	CHD9 (ENSVVUG00000019435) #19	TOX3 (ENSVVUG00000019398) #20	ENSVVUG00000019383 #22	ENSVVUG00000019379 #22	ENSVVUG00000019369	ENSVVUG00000019367	CYLD (ENSVVUG00000019356) #23	NOD2 (ENSVVUG00000019346) #24	SNX20 (ENSVVUG00000019339) #25	NKD1 (ENSVVUG00000019337) #26	BRD7 (ENSVVUG00000019113) #28	ADCY7 (ENSVVUG00000018266) #29	TENT4B (ENSVVUG00000018169) #30	HEATR3 (ENSVVUG00000018143) #31	CNEP1R1 (ENSVVUG00000018121)	ENSVVUG00000018112	ZNF423 (ENSVVUG00000018080) #32	ENSVVUG00000018065 #33	CBLN1 (ENSVVUG00000018057) #34
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00390000008767.b.c	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00390000008767.b.c	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.c #36	ENSGT00530000063553.b.b #37
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00390000008767.b.c	ENSGT00940000158043 #20	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.c #36	ENSGT00530000063553.b.b #37
lion	MODERN SPECIES	15	CES1 (ENSPLOG00000007640)	SLC6A2 (ENSPLOG00000007333)	LPCAT2 (ENSPLOG00000007233) #8	MMP2 (ENSPLOG00000007104) #9	IRX6 (ENSPLOG00000007043) #10	IRX5 (ENSPLOG00000007027) #11	IRX3 (ENSPLOG00000007008) #13	FTO (ENSPLOG00000006852) #14	RPGRIP1L (ENSPLOG00000006625) #15	AKTIP (ENSPLOG00000006580) #16	RBL2 (ENSPLOG00000006496) #17	CHD9 (ENSPLOG00000006326) #19	CHD9NB (ENSPLOG00000006265)	ENSPLOG00000006237	TOX3 (ENSPLOG00000006207) #20	SALL1 (ENSPLOG00000006158) #22	CYLD (ENSPLOG00000005966) #23	NOD2 (ENSPLOG00000005838) #24	SNX20 (ENSPLOG00000005801) #25	NKD1 (ENSPLOG00000005679) #26	BRD7 (ENSPLOG00000005652) #28	ADCY7 (ENSPLOG00000005432) #29	TENT4B (ENSPLOG00000015102) #30	HEATR3 (ENSPLOG00000015035) #31	CNEP1R1 (ENSPLOG00000014960)	ZNF423 (ENSPLOG00000014807) #32	C16orf78 (ENSPLOG00000014751) #33	CBLN1 (ENSPLOG00000014707) #34	N4BP1 (ENSPLOG00000014675) #35	ENSPLOG00000014631 #36	LONP2 (ENSPLOG00000014544) #37
leopard	MODERN SPECIES	28	CES5A (ENSPPRG00000024161)	ENSPPRG00000021104 #7	SLC6A2 (ENSPPRG00000016674)	LPCAT2 (ENSPPRG00000012494) #8	MMP2 (ENSPPRG00000012232) #9	IRX6 (ENSPPRG00000010817) #10	IRX5 (ENSPPRG00000010774) #11	IRX3 (ENSPPRG00000010599) #13	FTO (ENSPPRG00000008968) #14	RPGRIP1L (ENSPPRG00000007411) #15	AKTIP (ENSPPRG00000005954) #16	RBL2 (ENSPPRG00000005467) #17	CHD9 (ENSPPRG00000004801) #19	TOX3 (ENSPPRG00000022987) #20	ENSPPRG00000023231	SALL1 (ENSPPRG00000023283) #22	CYLD (ENSPPRG00000023533) #23	NOD2 (ENSPPRG00000024296) #24	SNX20 (ENSPPRG00000024487) #25	NKD1 (ENSPPRG00000024626) #26	BRD7 (ENSPPRG00000024677) #28	ADCY7 (ENSPPRG00000024790) #29	TENT4B (ENSPPRG00000024986) #30	HEATR3 (ENSPPRG00000025034) #31	CNEP1R1 (ENSPPRG00000021139)	ZNF423 (ENSPPRG00000019601) #32	C16orf78 (ENSPPRG00000016709) #33	CBLN1 (ENSPPRG00000016053) #34	N4BP1 (ENSPPRG00000014683) #35	ENSPPRG00000014448 #36	LONP2 (ENSPPRG00000013784) #37
Tiger	MODERN SPECIES	547								FTO (ENSPTIG00000014386) #14	RPGRIP1L (ENSPTIG00000018275) #15	AKTIP (ENSPTIG00000019681) #16	RBL2 (ENSPTIG00000020870) #17	CHD9 (ENSPTIG00000021854) #19	CHD9NB (ENSPTIG00000002739)	TOX3 (ENSPTIG00000012938) #20	ENSPTIG00000013539 #22	ENSPTIG00000002799 #22	CYLD (ENSPTIG00000014633) #23	NOD2 (ENSPTIG00000007371) #24	SNX20 (ENSPTIG00000009177) #25	NKD1 (ENSPTIG00000010677) #26	BRD7 (ENSPTIG00000011411) #28	ADCY7 (ENSPTIG00000014532) #29	ENSPTIG00000020374 #30	HEATR3 (ENSPTIG00000020656) #31	CNEP1R1 (ENSPTIG00000005471)	ZNF423 (ENSPTIG00000008348) #32	C16orf78 (ENSPTIG00000012056) #33	CBLN1 (ENSPTIG00000012479) #34	N4BP1 (ENSPTIG00000013078) #35	SIAH1 (ENSPTIG00000013734) #36	LONP2 (ENSPTIG00000013959) #37
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34
Canidae	ANCESTRAL SPECIES	14	ENSGT00940000155883.a.a	ENSGT00940000161596	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00940000168933	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33
Red fox	MODERN SPECIES	87	CES5A (ENSVVUG00000021745)	CES1 (ENSVVUG00000021742) #7	SLC6A2 (ENSVVUG00000020241)	LPCAT2 (ENSVVUG00000020204) #8	MMP2 (ENSVVUG00000019637) #9	ENSVVUG00000019604	IRX6 (ENSVVUG00000019600) #10	IRX5 (ENSVVUG00000019591) #11	IRX3 (ENSVVUG00000019559) #13	FTO (ENSVVUG00000019536) #14	RPGRIP1L (ENSVVUG00000019516) #15	AKTIP (ENSVVUG00000019466) #16	RBL2 (ENSVVUG00000019450) #17	CHD9 (ENSVVUG00000019435) #19	TOX3 (ENSVVUG00000019398) #20	ENSVVUG00000019383 #22	ENSVVUG00000019379 #22	ENSVVUG00000019369	ENSVVUG00000019367	CYLD (ENSVVUG00000019356) #23	NOD2 (ENSVVUG00000019346) #24	SNX20 (ENSVVUG00000019339) #25	NKD1 (ENSVVUG00000019337) #26	BRD7 (ENSVVUG00000019113) #28	ADCY7 (ENSVVUG00000018266) #29	TENT4B (ENSVVUG00000018169) #30	HEATR3 (ENSVVUG00000018143) #31	CNEP1R1 (ENSVVUG00000018121)	ENSVVUG00000018112	ZNF423 (ENSVVUG00000018080) #32	ENSVVUG00000018065 #33
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000155938.j #22
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000155938.j #22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000155938.j #22
American black bear	MODERN SPECIES	36																ENSUAMG00000023379 #22	ENSUAMG00000023381 #22	CYLD (ENSUAMG00000023383) #23
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00390000008767.b.c	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00390000008767.b.c	ENSGT00940000158043 #20	ENSGT00940000155938.j #22	ENSGT00940000155938.i #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.c #36
Tiger	MODERN SPECIES	547									FTO (ENSPTIG00000014386) #14	RPGRIP1L (ENSPTIG00000018275) #15	AKTIP (ENSPTIG00000019681) #16	RBL2 (ENSPTIG00000020870) #17	CHD9 (ENSPTIG00000021854) #19	CHD9NB (ENSPTIG00000002739)	TOX3 (ENSPTIG00000012938) #20	ENSPTIG00000013539 #22	ENSPTIG00000002799 #22	CYLD (ENSPTIG00000014633) #23	NOD2 (ENSPTIG00000007371) #24	SNX20 (ENSPTIG00000009177) #25	NKD1 (ENSPTIG00000010677) #26	BRD7 (ENSPTIG00000011411) #28	ADCY7 (ENSPTIG00000014532) #29	ENSPTIG00000020374 #30	HEATR3 (ENSPTIG00000020656) #31	CNEP1R1 (ENSPTIG00000005471)	ZNF423 (ENSPTIG00000008348) #32	C16orf78 (ENSPTIG00000012056) #33	CBLN1 (ENSPTIG00000012479) #34	N4BP1 (ENSPTIG00000013078) #35	SIAH1 (ENSPTIG00000013734) #36
Cat	MODERN SPECIES	246	CES5A (ENSFCAG00000014321) #7	SLC6A2 (ENSFCAG00000014317)	LPCAT2 (ENSFCAG00000027346) #8	MMP2 (ENSFCAG00000005935) #9	IRX6 (ENSFCAG00000013031) #10	IRX5 (ENSFCAG00000041752) #11	IRX3 (ENSFCAG00000039768) #13	FTO (ENSFCAG00000005267) #14	RPGRIP1L (ENSFCAG00000005266) #15	AKTIP (ENSFCAG00000009131) #16	RBL2 (ENSFCAG00000018239) #17	CHD9 (ENSFCAG00000022534) #19	CHD9NB (ENSFCAG00000045813)	ENSFCAG00000052306	TOX3 (ENSFCAG00000039012) #20	SALL1 (ENSFCAG00000024654) #22	CYLD (ENSFCAG00000008506) #23	NOD2 (ENSFCAG00000008505) #24	SNX20 (ENSFCAG00000008504) #25	NKD1 (ENSFCAG00000045078) #26	BRD7 (ENSFCAG00000009072) #28	ADCY7 (ENSFCAG00000029424) #29	ENSFCAG00000043056	TENT4B (ENSFCAG00000018796) #30	ENSFCAG00000052869	HEATR3 (ENSFCAG00000007212) #31	CNEP1R1 (ENSFCAG00000023936)	ENSFCAG00000053653	ZNF423 (ENSFCAG00000012158) #32	C16orf78 (ENSFCAG00000042254) #33	CBLN1 (ENSFCAG00000028536) #34
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Suina	ANCESTRAL SPECIES	2	ENSGT00940000154623.k	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Chacoan peccary	MODERN SPECIES	106	ENSCWAG00000010543	ENSCWAG00000009471 #7	SLC6A2 (ENSCWAG00000008247)	LPCAT2 (ENSCWAG00000008045) #8	MMP2 (ENSCWAG00000007874) #9	IRX6 (ENSCWAG00000007821) #10	IRX5 (ENSCWAG00000003331) #11	IRX3 (ENSCWAG00000003322) #13	FTO (ENSCWAG00000003286) #14	RPGRIP1L (ENSCWAG00000003236) #15	AKTIP (ENSCWAG00000003213) #16	RBL2 (ENSCWAG00000003187) #17	CHD9 (ENSCWAG00000003020) #19	CHD9NB (ENSCWAG00000002973)	TOX3 (ENSCWAG00000002960) #20	SALL1 (ENSCWAG00000002947) #22	CYLD (ENSCWAG00000002909) #23	NOD2 (ENSCWAG00000002862) #24	SNX20 (ENSCWAG00000002848) #25	NKD1 (ENSCWAG00000002836) #26	BRD7 (ENSCWAG00000002824) #28
Pig	MODERN SPECIES	14	SLC6A2 (ENSSSCG00000002827)	LPCAT2 (ENSSSCG00000002828) #8	MMP2 (ENSSSCG00000002829) #9	IRX6 (ENSSSCG00000002830) #10	IRX5 (ENSSSCG00000032145) #11	IRX3 (ENSSSCG00000002831) #13	FTO (ENSSSCG00000035949) #14	RPGRIP1L (ENSSSCG00000031652) #15	AKTIP (ENSSSCG00000026181) #16	RBL2 (ENSSSCG00000032648) #17	CHD9 (ENSSSCG00000033591) #19	ENSSSCG00000043977	CHD9NB (ENSSSCG00000055857)	ENSSSCG00000058098	TOX3 (ENSSSCG00000002835) #20	SALL1 (ENSSSCG00000002836) #22	CYLD (ENSSSCG00000040286) #23	NOD2 (ENSSSCG00000038073) #24	SNX20 (ENSSSCG00000025741) #25	NKD1 (ENSSSCG00000039875) #26	BRD7 (ENSSSCG00000021644) #28	ADCY7 (ENSSSCG00000039408) #29	TENT4B (ENSSSCG00000062607) #30	HEATR3 (ENSSSCG00000040887) #31	CNEP1R1 (ENSSSCG00000036005)	ZNF423 (ENSSSCG00000002838) #32	C16orf78 (ENSSSCG00000002839) #33	CBLN1 (ENSSSCG00000040652) #34	N4BP1 (ENSSSCG00000002841) #35	SIAH1 (ENSSSCG00000037263) #36	LONP2 (ENSSSCG00000023391) #37
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00940000166964	ENSGT00960000190798	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00960000190798	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000012524.a.b	ENSGT00940000158682 #35
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000012524.a.b	ENSGT00940000158682 #35
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.b.a	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000012524.a.b	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Dolphin	MODERN SPECIES	2948																SALL1 (ENSTTRG00000015152) #22	CYLD (ENSTTRG00000015136) #23
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.b.a	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000012524.a.b	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Vaquita	MODERN SPECIES	10	ENSPSNG00000018207	ENSPSNG00000018070 #7	SLC6A2 (ENSPSNG00000017229)	LPCAT2 (ENSPSNG00000017054) #8	MMP2 (ENSPSNG00000016865) #9	IRX6 (ENSPSNG00000016785) #10	IRX5 (ENSPSNG00000016694) #11	IRX3 (ENSPSNG00000016643) #13	FTO (ENSPSNG00000016453) #14	RPGRIP1L (ENSPSNG00000016190) #15	AKTIP (ENSPSNG00000016106) #16	RBL2 (ENSPSNG00000016027) #17	CHD9 (ENSPSNG00000015827) #19	CHD9NB (ENSPSNG00000015748)	TOX3 (ENSPSNG00000015650) #20	SALL1 (ENSPSNG00000015573) #22	CYLD (ENSPSNG00000015466) #23	NOD2 (ENSPSNG00000015318) #24	SNX20 (ENSPSNG00000015147) #25	NKD1 (ENSPSNG00000015073) #26	BRD7 (ENSPSNG00000014996) #28	ENSPSNG00000014944 #29	TENT4B (ENSPSNG00000014186) #30	HEATR3 (ENSPSNG00000014045) #31	CNEP1R1 (ENSPSNG00000013955)	ZNF423 (ENSPSNG00000013840) #32	C16orf78 (ENSPSNG00000013755) #33	CBLN1 (ENSPSNG00000013689) #34	ENSPSNG00000013659	N4BP1 (ENSPSNG00000013602) #35	SIAH1 (ENSPSNG00000013519) #36
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000012524.a.b	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Beluga whale	MODERN SPECIES	3	ENSDLEG00000007594	ENSDLEG00000007413 #7	SLC6A2 (ENSDLEG00000007299)	LPCAT2 (ENSDLEG00000007275) #8	MMP2 (ENSDLEG00000007268) #9	IRX6 (ENSDLEG00000007256) #10	IRX5 (ENSDLEG00000007253) #11	IRX3 (ENSDLEG00000007250) #13	FTO (ENSDLEG00000007239) #14	RPGRIP1L (ENSDLEG00000006851) #15	AKTIP (ENSDLEG00000006795) #16	RBL2 (ENSDLEG00000006650) #17	CHD9 (ENSDLEG00000004714) #19	CHD9NB (ENSDLEG00000004490)	TOX3 (ENSDLEG00000004483) #20	SALL1 (ENSDLEG00000004477) #22	CYLD (ENSDLEG00000004470) #23	NOD2 (ENSDLEG00000004464) #24	SNX20 (ENSDLEG00000004455) #25	NKD1 (ENSDLEG00000004447) #26	BRD7 (ENSDLEG00000004432) #28	ADCY7 (ENSDLEG00000004403) #29	TENT4B (ENSDLEG00000004389) #30	HEATR3 (ENSDLEG00000004380) #31	CNEP1R1 (ENSDLEG00000004375)	ZNF423 (ENSDLEG00000004357) #32	C16orf78 (ENSDLEG00000004349) #33	CBLN1 (ENSDLEG00000004341) #34	ENSDLEG00000004338	N4BP1 (ENSDLEG00000004331) #35	SIAH1 (ENSDLEG00000004325) #36
Narwhal	MODERN SPECIES	296	ENSMMNG00015008888 #7	SLC6A2 (ENSMMNG00015009267)	LPCAT2 (ENSMMNG00015009321) #8	MMP2 (ENSMMNG00015009342) #9	IRX6 (ENSMMNG00015009363) #10	IRX5 (ENSMMNG00015009375) #11	IRX3 (ENSMMNG00015009381) #13	FTO (ENSMMNG00015009401) #14	RPGRIP1L (ENSMMNG00015009433) #15	AKTIP (ENSMMNG00015009460) #16	RBL2 (ENSMMNG00015009484) #17	CHD9 (ENSMMNG00015009549) #19	ENSMMNG00015009586	CHD9NB (ENSMMNG00015009592)	TOX3 (ENSMMNG00015009598) #20	SALL1 (ENSMMNG00015009605) #22	CYLD (ENSMMNG00015009618) #23	NOD2 (ENSMMNG00015009637) #24	SNX20 (ENSMMNG00015009652) #25	NKD1 (ENSMMNG00015009664) #26	BRD7 (ENSMMNG00015009678) #28	ADCY7 (ENSMMNG00015009697) #29	TENT4B (ENSMMNG00015009736) #30	HEATR3 (ENSMMNG00015009780) #31	CNEP1R1 (ENSMMNG00015009819)	ZNF423 (ENSMMNG00015009834) #32	C16orf78 (ENSMMNG00015009847) #33	CBLN1 (ENSMMNG00015009855) #34	ENSMMNG00015009863	N4BP1 (ENSMMNG00015009871) #35	SIAH1 (ENSMMNG00015000049) #36
Pecora	ANCESTRAL SPECIES	4	ENSGT00950000182967.a.a.a.a.a.a.n.c	ENSGT00940000158564.e #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000158564.e #7	ENSGT00940000154623.k.a.b	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000158564.e #7	ENSGT00940000154623.k.a.b	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00910000148543	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00910000148543	ENSGT01040000240503.B.cb.b	ENSGT00940000158043 #20	ENSGT00960000189733	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Bos	ANCESTRAL SPECIES	4	ENSGT00940000154623.k.a.b	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00910000148543	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00960000187150	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36
Bos_b	ANCESTRAL SPECIES		ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00910000148543	ENSGT00940000158043 #20	ENSGT00390000018141.i.a.b.b.b.a.b.b.a.b.b	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Cow	MODERN SPECIES	9	CES1 (ENSBTAG00000011021)	SLC6A2 (ENSBTAG00000003353)	LPCAT2 (ENSBTAG00000019272) #8	MMP2 (ENSBTAG00000019267) #9	IRX6 (ENSBTAG00000016407) #10	IRX5 (ENSBTAG00000004838) #11	IRX3 (ENSBTAG00000012083) #13	FTO (ENSBTAG00000012501) #14	RPGRIP1L (ENSBTAG00000012499) #15	AKTIP (ENSBTAG00000016250) #16	RBL2 (ENSBTAG00000016243) #17	CHD9 (ENSBTAG00000002287) #19	ENSBTAG00000049705	TOX3 (ENSBTAG00000000418) #20	ENSBTAG00000051871	SALL1 (ENSBTAG00000008544) #22	CYLD (ENSBTAG00000006291) #23	NOD2 (ENSBTAG00000020936) #24	SNX20 (ENSBTAG00000003961) #25	NKD1 (ENSBTAG00000012295) #26	BRD7 (ENSBTAG00000021575) #28	ADCY7 (ENSBTAG00000006208) #29	TENT4B (ENSBTAG00000007942) #30	HEATR3 (ENSBTAG00000016640) #31	CNEP1R1 (ENSBTAG00000033078)	ENSBTAG00000052469	ENSBTAG00000051062	ZNF423 (ENSBTAG00000017397) #32	C18H16orf78 (ENSBTAG00000008720) #33	CBLN1 (ENSBTAG00000015194) #34	N4BP1 (ENSBTAG00000019938) #35
Hybrid Bos Indicus	MODERN SPECIES	9	LPCAT2 (ENSBIXG00005015276) #8	MMP2 (ENSBIXG00005005977) #9	IRX6 (ENSBIXG00005002212) #10	ENSBIXG00005015047	IRX5 (ENSBIXG00005015036) #11	IRX3 (ENSBIXG00005002200) #13	FTO (ENSBIXG00005002186) #14	RPGRIP1L (ENSBIXG00005014864) #15	AKTIP (ENSBIXG00005014732) #16	RBL2 (ENSBIXG00005014700) #17	CHD9 (ENSBIXG00005014635) #19	CHD9NB (ENSBIXG00005014531)	ENSBIXG00005014525	TOX3 (ENSBIXG00005014497) #20	ENSBIXG00005014430	SALL1 (ENSBIXG00005006737) #22	CYLD (ENSBIXG00005014346) #23	NOD2 (ENSBIXG00005014215) #24	SNX20 (ENSBIXG00005005704) #25	NKD1 (ENSBIXG00005005932) #26	BRD7 (ENSBIXG00005014141) #28	ADCY7 (ENSBIXG00005014084) #29	TENT4B (ENSBIXG00005007491) #30	HEATR3 (ENSBIXG00005013925) #31	ENSBIXG00005005400	CNEP1R1 (ENSBIXG00005001738)	ZNF423 (ENSBIXG00005005395) #32	C16orf78 (ENSBIXG00005013700) #33	CBLN1 (ENSBIXG00005001667) #34	N4BP1 (ENSBIXG00005013624) #35	ENSBIXG00005013587 #36
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000154623.k.a.b	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00910000148543	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00390000003561.m.c.a	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00960000187150	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Domestic yak	MODERN SPECIES	12	LPCAT2 (ENSBGRG00000023829) #8	MMP2 (ENSBGRG00000023889) #9	IRX6 (ENSBGRG00000024080) #10	IRX5 (ENSBGRG00000024137) #11	IRX3 (ENSBGRG00000024169) #13	FTO (ENSBGRG00000024270) #14	ENSBGRG00000024677	RPGRIP1L (ENSBGRG00000024721) #15	AKTIP (ENSBGRG00000024918) #16	RBL2 (ENSBGRG00000024969) #17	CHD9 (ENSBGRG00000025060) #19	ENSBGRG00000025379	ENSBGRG00000025389	ENSBGRG00000025395	ENSBGRG00000025407 #20	SALL1 (ENSBGRG00000025421) #22	CYLD (ENSBGRG00000005642) #23	NOD2 (ENSBGRG00000006201) #24	SNX20 (ENSBGRG00000006807) #25	NKD1 (ENSBGRG00000007093) #26	ENSBGRG00000007550	BRD7 (ENSBGRG00000007865) #28	ADCY7 (ENSBGRG00000008786) #29	TENT4B (ENSBGRG00000009967) #30	ENSBGRG00000010894	ENSBGRG00000010983	HEATR3 (ENSBGRG00000011232) #31	ENSBGRG00000011559	CNEP1R1 (ENSBGRG00000011705)	ZNF423 (ENSBGRG00000012116) #32	C16orf78 (ENSBGRG00000012467) #33
Wild yak	MODERN SPECIES	1175															ENSBMUG00000010065	SALL1 (ENSBMUG00000010082) #22
American bison	MODERN SPECIES	2214													ENSBBBG00000017485	TOX3 (ENSBBBG00000004332) #20	ENSBBBG00000004334	SALL1 (ENSBBBG00000017538) #22	CYLD (ENSBBBG00000017785) #23	NOD2 (ENSBBBG00000017827) #24	SNX20 (ENSBBBG00000017855) #25	NKD1 (ENSBBBG00000017887) #26	BRD7 (ENSBBBG00000017931) #28	ADCY7 (ENSBBBG00000018007) #29	TENT4B (ENSBBBG00000018039) #30	HEATR3 (ENSBBBG00000018055) #31	CNEP1R1 (ENSBBBG00000018100)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000154623.k.a.a	ENSGT00940000158564.e #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00910000148543	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.a.a #36	ENSGT00530000063553.b.b #37
Goat	MODERN SPECIES	9	CDK10 (ENSCHIG00000009612)	SPATA2L (ENSCHIG00000017204)	VPS9D1 (ENSCHIG00000025705)	ZNF276 (ENSCHIG00000017992)	FANCA (ENSCHIG00000003612)	SPIRE2 (ENSCHIG00000019449)	TCF25 (ENSCHIG00000020771)	MC1R (ENSCHIG00000010476)	TUBB3 (ENSCHIG00000026725)	DEF8 (ENSCHIG00000025811)	ENSCHIG00000011696	DBNDD1 (ENSCHIG00000015185)	GAS8 (ENSCHIG00000021451)	ENSCHIG00000009006	TOX3 (ENSCHIG00000009545) #20	SALL1 (ENSCHIG00000026074) #22	ENSCHIG00000011085	CYLD (ENSCHIG00000026390) #23	NOD2 (ENSCHIG00000024746) #24	SNX20 (ENSCHIG00000026020) #25	NKD1 (ENSCHIG00000022144) #26	BRD7 (ENSCHIG00000023787) #28	ADCY7 (ENSCHIG00000025184) #29	TENT4B (ENSCHIG00000021933) #30	HEATR3 (ENSCHIG00000016750) #31	CNEP1R1 (ENSCHIG00000021937)	ZNF423 (ENSCHIG00000027139) #32	C16orf78 (ENSCHIG00000026888) #33	CBLN1 (ENSCHIG00000016657) #34	ENSCHIG00000020063	N4BP1 (ENSCHIG00000019641) #35
Rambouillet Sheep	MODERN SPECIES	5	SLC6A2 (ENSOARG00020009128)	LPCAT2 (ENSOARG00020008951) #8	MMP2 (ENSOARG00020008789) #9	IRX6 (ENSOARG00020008760) #10	IRX5 (ENSOARG00020008717) #11	IRX3 (ENSOARG00020008675) #13	ENSOARG00020008643	FTO (ENSOARG00020008419) #14	RPGRIP1L (ENSOARG00020008133) #15	AKTIP (ENSOARG00020008060) #16	RBL2 (ENSOARG00020007785) #17	CHD9 (ENSOARG00020007553) #19	CHD9NB (ENSOARG00020007518)	ENSOARG00020007504	TOX3 (ENSOARG00020007461) #20	SALL1 (ENSOARG00020007355) #22	ENSOARG00020007302	CYLD (ENSOARG00020007008) #23	NOD2 (ENSOARG00020006729) #24	SNX20 (ENSOARG00020006621) #25	NKD1 (ENSOARG00020006504) #26	ENSOARG00020006477	BRD7 (ENSOARG00020006275) #28	ADCY7 (ENSOARG00020006198) #29	TENT4B (ENSOARG00020006032) #30	HEATR3 (ENSOARG00020005991) #31	CNEP1R1 (ENSOARG00020005909)	ENSOARG00020005883	ZNF423 (ENSOARG00020005823) #32	C16orf78 (ENSOARG00020005789) #33	CBLN1 (ENSOARG00020005764) #34
Siberian musk deer	MODERN SPECIES	1192	ENSMMSG00000012191	ENSMMSG00000012156	SLC6A2 (ENSMMSG00000011050)	LPCAT2 (ENSMMSG00000010940) #8	MMP2 (ENSMMSG00000010869) #9	IRX6 (ENSMMSG00000010817) #10	IRX5 (ENSMMSG00000010766) #11	IRX3 (ENSMMSG00000010728) #13	FTO (ENSMMSG00000010603) #14	RPGRIP1L (ENSMMSG00000010119) #15	AKTIP (ENSMMSG00000010049) #16	RBL2 (ENSMMSG00000009982) #17	CHD9 (ENSMMSG00000009559) #19	ENSMMSG00000009494	TOX3 (ENSMMSG00000009435) #20	SALL1 (ENSMMSG00000009393) #22	CYLD (ENSMMSG00000009139) #23	NOD2 (ENSMMSG00000009067) #24	SNX20 (ENSMMSG00000008973) #25	NKD1 (ENSMMSG00000008933) #26	BRD7 (ENSMMSG00000008887) #28	ADCY7 (ENSMMSG00000008792) #29	TENT4B (ENSMMSG00000008637) #30	HEATR3 (ENSMMSG00000008588) #31	CNEP1R1 (ENSMMSG00000008491)	ZNF423 (ENSMMSG00000008456) #32	ENSMMSG00000008432 #33	CBLN1 (ENSMMSG00000008404) #34
Yarkand deer	MODERN SPECIES	27	ENSCHYG00000007377	ENSCHYG00000006954 #7	SLC6A2 (ENSCHYG00000006837)	LPCAT2 (ENSCHYG00000006753) #8	MMP2 (ENSCHYG00000006606) #9	IRX6 (ENSCHYG00000006545) #10	IRX5 (ENSCHYG00000006511) #11	IRX3 (ENSCHYG00000006454) #13	FTO (ENSCHYG00000006304) #14	RPGRIP1L (ENSCHYG00000006115) #15	AKTIP (ENSCHYG00000006066) #16	RBL2 (ENSCHYG00000005980) #17	ENSCHYG00000005967	CHD9 (ENSCHYG00000005567) #19	ENSCHYG00000005452	SALL1 (ENSCHYG00000005364) #22	CYLD (ENSCHYG00000005179) #23	NOD2 (ENSCHYG00000005036) #24	SNX20 (ENSCHYG00000004988) #25	NKD1 (ENSCHYG00000004944) #26	BRD7 (ENSCHYG00000004908) #28	ADCY7 (ENSCHYG00000004827) #29	TENT4B (ENSCHYG00000004780) #30	HEATR3 (ENSCHYG00000004729) #31	CNEP1R1 (ENSCHYG00000004697)	ZNF423 (ENSCHYG00000004665) #32	C16orf78 (ENSCHYG00000004643) #33	CBLN1 (ENSCHYG00000004635) #34	N4BP1 (ENSCHYG00000004618) #35	ENSCHYG00000004605 #36	LONP2 (ENSCHYG00000004582) #37
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000161596	ENSGT00940000154623.l	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Arabian camel	MODERN SPECIES	35	ENSCDRG00005001870	SLC6A2 (ENSCDRG00005001765)	LPCAT2 (ENSCDRG00005001714) #8	MMP2 (ENSCDRG00005001638) #9	IRX6 (ENSCDRG00005001597) #10	IRX5 (ENSCDRG00005001574) #11	IRX3 (ENSCDRG00005001552) #13	FTO (ENSCDRG00005001486) #14	RPGRIP1L (ENSCDRG00005001382) #15	AKTIP (ENSCDRG00005001331) #16	RBL2 (ENSCDRG00005001292) #17	CHD9 (ENSCDRG00005001229) #19	CHD9NB (ENSCDRG00005001186)	ENSCDRG00005001171	TOX3 (ENSCDRG00005001153) #20	SALL1 (ENSCDRG00005001107) #22	CYLD (ENSCDRG00005001037) #23	NOD2 (ENSCDRG00005000930) #24	SNX20 (ENSCDRG00005000889) #25	NKD1 (ENSCDRG00005000863) #26	BRD7 (ENSCDRG00005000831) #28	ADCY7 (ENSCDRG00005000750) #29	TENT4B (ENSCDRG00005000655) #30	HEATR3 (ENSCDRG00005000603) #31	CNEP1R1 (ENSCDRG00005000581)	ZNF423 (ENSCDRG00005000552) #32	C16orf78 (ENSCDRG00005000529) #33	CBLN1 (ENSCDRG00005000510) #34	N4BP1 (ENSCDRG00005000490) #35	SIAH1 (ENSCDRG00005000466) #36	LONP2 (ENSCDRG00005000407) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155938 #22
Common shrew	MODERN SPECIES	337																SALL1 (ENSSARG00000000661) #22
Hedgehog	MODERN SPECIES	15961																SALL1 (ENSEEUG00000002014) #22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00390000008759	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Primates	ANCESTRAL SPECIES	21	ENSGT00940000154623	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000154623	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000154623.e	ENSGT00940000154623.f	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.h	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000154623.f	ENSGT00940000161596	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934.a #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.h	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Marmoset	MODERN SPECIES	12	IRX6 (ENSCJAG00000012962) #10	IRX5 (ENSCJAG00000012968) #11	ENSCJAG00000084160	IRX3 (ENSCJAG00000001418) #13	FTO (ENSCJAG00000001425) #14	RPGRIP1L (ENSCJAG00000001445) #15	ENSCJAG00000001498 #16	RBL2 (ENSCJAG00000001518) #17	ENSCJAG00000038895	CHD9 (ENSCJAG00000001573) #19	ENSCJAG00000070155	ENSCJAG00000073882	TOX3 (ENSCJAG00000001731) #20	ENSCJAG00000040416	ENSCJAG00000073253	SALL1 (ENSCJAG00000001740) #22	CYLD (ENSCJAG00000001749) #23	ENSCJAG00000041425 #24	ENSCJAG00000057779	ENSCJAG00000060946	ENSCJAG00000078065	ENSCJAG00000075236	SNX20 (ENSCJAG00000001791) #25	NKD1 (ENSCJAG00000001801) #26	BRD7 (ENSCJAG00000001832) #28	ADCY7 (ENSCJAG00000001898) #29	TENT4B (ENSCJAG00000001932) #30	ENSCJAG00000075120	HEATR3 (ENSCJAG00000001972) #31	CNEP1R1 (ENSCJAG00000001997)	ZNF423 (ENSCJAG00000011975) #32
Cebidae_a	ANCESTRAL SPECIES	95	ENSGT00940000154623.f	ENSGT00940000161596	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934.a #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Capuchin	MODERN SPECIES	63	IRX5 (ENSCCAG00000035591) #11	ENSCCAG00000035759	ENSCCAG00000033265	IRX3 (ENSCCAG00000029708) #13	FTO (ENSCCAG00000025984) #14	RPGRIP1L (ENSCCAG00000026356) #15	AKTIP (ENSCCAG00000034526) #16	RBL2 (ENSCCAG00000035540) #17	CHD9 (ENSCCAG00000036178) #19	ENSCCAG00000022180	ENSCCAG00000020240	TOX3 (ENSCCAG00000024480) #20	ENSCCAG00000022165	ENSCCAG00000022450	ENSCCAG00000021070	SALL1 (ENSCCAG00000001639) #22	CYLD (ENSCCAG00000030271) #23	NOD2 (ENSCCAG00000034885) #24	ENSCCAG00000026084	SNX20 (ENSCCAG00000036877) #25	NKD1 (ENSCCAG00000033942) #26	ENSCCAG00000011713	BRD7 (ENSCCAG00000023437) #28	ADCY7 (ENSCCAG00000023487) #29	TENT4B (ENSCCAG00000035345) #30	HEATR3 (ENSCCAG00000031847) #31	ENSCCAG00000035613	ZNF423 (ENSCCAG00000009645) #32	C16orf78 (ENSCCAG00000036138) #33	CBLN1 (ENSCCAG00000023628) #34	N4BP1 (ENSCCAG00000013512) #35
Bolivian squirrel monkey	MODERN SPECIES	133	SLC6A2 (ENSSBOG00000024899)	LPCAT2 (ENSSBOG00000025828) #8	MMP2 (ENSSBOG00000031949) #9	IRX6 (ENSSBOG00000035547) #10	IRX5 (ENSSBOG00000027403) #11	ENSSBOG00000030191	ENSSBOG00000016301	IRX3 (ENSSBOG00000030739) #13	FTO (ENSSBOG00000031008) #14	RPGRIP1L (ENSSBOG00000029639) #15	ENSSBOG00000028267 #16	RBL2 (ENSSBOG00000035559) #17	CHD9 (ENSSBOG00000030240) #19	TOX3 (ENSSBOG00000031439) #20	ENSSBOG00000032298	SALL1 (ENSSBOG00000032186) #22	CYLD (ENSSBOG00000023333) #23	NOD2 (ENSSBOG00000024291) #24	ENSSBOG00000025917	SNX20 (ENSSBOG00000029064) #25	NKD1 (ENSSBOG00000033910) #26	ENSSBOG00000029661 #28	ADCY7 (ENSSBOG00000030162) #29	TENT4B (ENSSBOG00000020525) #30	HEATR3 (ENSSBOG00000026626) #31	CNEP1R1 (ENSSBOG00000000332)	ZNF423 (ENSSBOG00000029124) #32	C16orf78 (ENSSBOG00000024244) #33	CBLN1 (ENSSBOG00000028668) #34	N4BP1 (ENSSBOG00000019911) #35	SIAH1 (ENSSBOG00000027075) #36
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	968	ENSANAG00000032650	SLC6A2 (ENSANAG00000023105)	LPCAT2 (ENSANAG00000028308) #8	MMP2 (ENSANAG00000029632) #9	IRX6 (ENSANAG00000021405) #10	IRX5 (ENSANAG00000030825) #11	ENSANAG00000037324	IRX3 (ENSANAG00000024444) #13	FTO (ENSANAG00000036534) #14	RPGRIP1L (ENSANAG00000023174) #15	AKTIP (ENSANAG00000032426) #16	RBL2 (ENSANAG00000034864) #17	CHD9 (ENSANAG00000015630) #19	ENSANAG00000018076	TOX3 (ENSANAG00000033705) #20	SALL1 (ENSANAG00000027238) #22
Mas night monkey	MODERN SPECIES	1206			ENSANAG00000020179	NUDT11 (ENSANAG00000027486)	EZHIP (ENSANAG00000027291)	BMP15 (ENSANAG00000028806)	SHROOM4 (ENSANAG00000020629)	DGKK (ENSANAG00000024570)	ENSANAG00000035064	AKAP4 (ENSANAG00000033875)	CLCN5 (ENSANAG00000000063)	USP27X (ENSANAG00000019357)	PAGE4 (ENSANAG00000029457)	PAGE1 (ENSANAG00000024656)	ENSANAG00000037052	ENSANAG00000031014 #22	ENSANAG00000030824	ENSANAG00000029419	PPP1R3F (ENSANAG00000027387)	FOXP3 (ENSANAG00000036359)	CCDC22 (ENSANAG00000028058)	CACNA1F (ENSANAG00000020527)	SYP (ENSANAG00000034953)	PRICKLE3 (ENSANAG00000024859)	PLP2 (ENSANAG00000029245)	MAGIX (ENSANAG00000038043)	ENSANAG00000030473	WDR45 (ENSANAG00000036620)	CCDC120 (ENSANAG00000021812)	TFE3 (ENSANAG00000037525)	GRIPAP1 (ENSANAG00000036795)
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Vervet Monkey	MODERN SPECIES	24	LPCAT2 (ENSCSAG00000005278) #8	MMP2 (ENSCSAG00000005282) #9	IRX6 (ENSCSAG00000005285) #10	IRX5 (ENSCSAG00000005287) #11	ENSCSAG00000005289	IRX3 (ENSCSAG00000005290) #13	ENSCSAG00000005293	FTO (ENSCSAG00000005296) #14	RPGRIP1L (ENSCSAG00000005297) #15	AKTIP (ENSCSAG00000005299) #16	RBL2 (ENSCSAG00000005301) #17	ENSCSAG00000018863	ENSCSAG00000005305	CHD9 (ENSCSAG00000005311) #19	TOX3 (ENSCSAG00000005317) #20	SALL1 (ENSCSAG00000005319) #22	CYLD (ENSCSAG00000005324) #23	NOD2 (ENSCSAG00000005331) #24	SNX20 (ENSCSAG00000005339) #25	NKD1 (ENSCSAG00000005349) #26	BRD7 (ENSCSAG00000005361) #28	ADCY7 (ENSCSAG00000005371) #29	TENT4B (ENSCSAG00000005390) #30	HEATR3 (ENSCSAG00000005398) #31	CNEP1R1 (ENSCSAG00000005400)	ZNF423 (ENSCSAG00000005405) #32	C16orf78 (ENSCSAG00000005410) #33	CBLN1 (ENSCSAG00000005415) #34	N4BP1 (ENSCSAG00000005417) #35	SIAH1 (ENSCSAG00000005422) #36	ENSCSAG00000018862
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000154623.d	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000154623.c	ENSGT00940000154623.d	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000166898.a.a.b.b.a.a.a.b.b.a.a.b.b.a.a.b.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.a.a.b.b	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.b.b.a.b.b	ENSGT00940000159811 #34
Rhesus	MODERN SPECIES	12	SLC6A2 (ENSMMUG00000020238)	LPCAT2 (ENSMMUG00000004478) #8	MMP2 (ENSMMUG00000004475) #9	IRX6 (ENSMMUG00000011658) #10	IRX5 (ENSMMUG00000017440) #11	IRX3 (ENSMMUG00000001389) #13	FTO (ENSMMUG00000020583) #14	RPGRIP1L (ENSMMUG00000020580) #15	AKTIP (ENSMMUG00000008657) #16	RBL2 (ENSMMUG00000043440) #17	ENSMMUG00000051469	CHD9 (ENSMMUG00000016310) #19	ENSMMUG00000061289	ENSMMUG00000049893	TOX3 (ENSMMUG00000013967) #20	SALL1 (ENSMMUG00000017200) #22	ENSMMUG00000055889	CYLD (ENSMMUG00000012209) #23	NOD2 (ENSMMUG00000012207) #24	SNX20 (ENSMMUG00000019869) #25	NKD1 (ENSMMUG00000019868) #26	BRD7 (ENSMMUG00000003119) #28	ADCY7 (ENSMMUG00000003118) #29	TENT4B (ENSMMUG00000003116) #30	HEATR3 (ENSMMUG00000020065) #31	ENSMMUG00000051827	CNEP1R1 (ENSMMUG00000008365)	ENSMMUG00000065197	ZNF423 (ENSMMUG00000021261) #32	C20H16orf78 (ENSMMUG00000019881) #33	ENSMMUG00000057032
Crab-eating macaque	MODERN SPECIES	12	LPCAT2 (ENSMFAG00000032289) #8	MMP2 (ENSMFAG00000037156) #9	IRX6 (ENSMFAG00000046096) #10	IRX5 (ENSMFAG00000002928) #11	IRX3 (ENSMFAG00000032048) #13	ENSMFAG00000065181	FTO (ENSMFAG00000033026) #14	RPGRIP1L (ENSMFAG00000043106) #15	AKTIP (ENSMFAG00000044514) #16	ENSMFAG00000059726	RBL2 (ENSMFAG00000039132) #17	CHD9 (ENSMFAG00000041354) #19	ENSMFAG00000060755	ENSMFAG00000056521	TOX3 (ENSMFAG00000032933) #20	SALL1 (ENSMFAG00000003298) #22	CYLD (ENSMFAG00000043501) #23	NOD2 (ENSMFAG00000037753) #24	ENSMFAG00000033996 #25	NKD1 (ENSMFAG00000044696) #26	BRD7 (ENSMFAG00000035566) #28	ADCY7 (ENSMFAG00000037814) #29	ENSMFAG00000002315 #30	HEATR3 (ENSMFAG00000002184) #31	CNEP1R1 (ENSMFAG00000001901)	ENSMFAG00000054799	ZNF423 (ENSMFAG00000045032) #32	C16orf78 (ENSMFAG00000001439) #33	ENSMFAG00000053236	ENSMFAG00000056302	ENSMFAG00000059766 #27
Pig-tailed macaque	MODERN SPECIES	188														TOX3 (ENSMNEG00000031324) #20	ENSMNEG00000030103	SALL1 (ENSMNEG00000034770) #22	CYLD (ENSMNEG00000030288) #23	NOD2 (ENSMNEG00000032525) #24	SNX20 (ENSMNEG00000000544) #25	NKD1 (ENSMNEG00000029629) #26	BRD7 (ENSMNEG00000041585) #28	ADCY7 (ENSMNEG00000028598) #29	TENT4B (ENSMNEG00000036382) #30	HEATR3 (ENSMNEG00000044688) #31	CNEP1R1 (ENSMNEG00000040247)	ZNF423 (ENSMNEG00000007103) #32	C16orf78 (ENSMNEG00000044619) #33	CBLN1 (ENSMNEG00000039224) #34	N4BP1 (ENSMNEG00000035504) #35	SIAH1 (ENSMNEG00000032985) #36	LONP2 (ENSMNEG00000033321) #37
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b.b	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000154623.d	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000163338.b.b.b	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00390000006350.m.a.c.a.lb.b	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Sooty mangabey	MODERN SPECIES	96	SLC6A2 (ENSCATG00000031249)	LPCAT2 (ENSCATG00000044509) #8	MMP2 (ENSCATG00000014549) #9	IRX6 (ENSCATG00000035256) #10	IRX5 (ENSCATG00000044712) #11	ENSCATG00000021759	IRX3 (ENSCATG00000035868) #13	FTO (ENSCATG00000030692) #14	RPGRIP1L (ENSCATG00000037264) #15	AKTIP (ENSCATG00000033583) #16	RBL2 (ENSCATG00000009941) #17	ENSCATG00000009432	CHD9 (ENSCATG00000036753) #19	ENSCATG00000030774	TOX3 (ENSCATG00000008040) #20	SALL1 (ENSCATG00000004982) #22	CYLD (ENSCATG00000025694) #23	NOD2 (ENSCATG00000032818) #24	SNX20 (ENSCATG00000031155) #25	NKD1 (ENSCATG00000033443) #26	BRD7 (ENSCATG00000027818) #28	ENSCATG00000003671	ADCY7 (ENSCATG00000022081) #29	TENT4B (ENSCATG00000031641) #30	HEATR3 (ENSCATG00000021656) #31	CNEP1R1 (ENSCATG00000015240)	ZNF423 (ENSCATG00000034661) #32	C16orf78 (ENSCATG00000021615) #33	CBLN1 (ENSCATG00000042192) #34	ENSCATG00000028377	N4BP1 (ENSCATG00000036429) #35
Drill	MODERN SPECIES	984										AKTIP (ENSMLEG00000035100) #16	RBL2 (ENSMLEG00000038469) #17	ENSMLEG00000036960	CHD9 (ENSMLEG00000043219) #19	ENSMLEG00000039258	TOX3 (ENSMLEG00000009471) #20	SALL1 (ENSMLEG00000036406) #22	CYLD (ENSMLEG00000005317) #23	NOD2 (ENSMLEG00000036716) #24	SNX20 (ENSMLEG00000036378) #25	NKD1 (ENSMLEG00000032515) #26	BRD7 (ENSMLEG00000041253) #28	ADCY7 (ENSMLEG00000015089) #29	TENT4B (ENSMLEG00000034283) #30
Olive baboon	MODERN SPECIES	9	SLC6A2 (ENSPANG00000018478)	LPCAT2 (ENSPANG00000006269) #8	MMP2 (ENSPANG00000006408) #9	IRX6 (ENSPANG00000024570) #10	IRX5 (ENSPANG00000007155) #11	IRX3 (ENSPANG00000041905) #13	ENSPANG00000017095	FTO (ENSPANG00000016386) #14	RPGRIP1L (ENSPANG00000015743) #15	AKTIP (ENSPANG00000018701) #16	RBL2 (ENSPANG00000021504) #17	CHD9 (ENSPANG00000019307) #19	CHD9NB (ENSPANG00000047104)	ENSPANG00000034612	TOX3 (ENSPANG00000016176) #20	SALL1 (ENSPANG00000024176) #22	CYLD (ENSPANG00000019153) #23	NOD2 (ENSPANG00000019150) #24	SNX20 (ENSPANG00000000812) #25	NKD1 (ENSPANG00000009782) #26	BRD7 (ENSPANG00000024571) #28	ADCY7 (ENSPANG00000011498) #29	TENT4B (ENSPANG00000006934) #30	HEATR3 (ENSPANG00000024573) #31	CNEP1R1 (ENSPANG00000016962)	ZNF423 (ENSPANG00000022231) #32	ENSPANG00000038448	C16orf78 (ENSPANG00000022694) #33	CBLN1 (ENSPANG00000009450) #34	ENSPANG00000051011	N4BP1 (ENSPANG00000007118) #35
Rhinopithecus	ANCESTRAL SPECIES	476														ENSGT00940000158043 #20	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30
Black snub-nosed monkey	MODERN SPECIES	718														TOX3 (ENSRBIG00000043696) #20	ENSRBIG00000035141	SALL1 (ENSRBIG00000015707) #22	CYLD (ENSRBIG00000036085) #23	NOD2 (ENSRBIG00000014904) #24	SNX20 (ENSRBIG00000035946) #25	NKD1 (ENSRBIG00000032570) #26
Golden snub-nosed monkey	MODERN SPECIES	2960																SALL1 (ENSRROG00000035777) #22	CYLD (ENSRROG00000007505) #23
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00390000016567.f	ENSGT00940000154837.f #36
Gibbon	MODERN SPECIES	11	ENSNLEG00000001480	SLC6A2 (ENSNLEG00000001314)	LPCAT2 (ENSNLEG00000001258) #8	MMP2 (ENSNLEG00000001210) #9	IRX6 (ENSNLEG00000001193) #10	IRX5 (ENSNLEG00000001190) #11	ENSNLEG00000035629	IRX3 (ENSNLEG00000032462) #13	FTO (ENSNLEG00000033330) #14	RPGRIP1L (ENSNLEG00000001149) #15	AKTIP (ENSNLEG00000031116) #16	RBL2 (ENSNLEG00000001036) #17	CHD9 (ENSNLEG00000001026) #19	ENSNLEG00000013975	ENSNLEG00000034210 #20	SALL1 (ENSNLEG00000001008) #22	CYLD (ENSNLEG00000000923) #23	NOD2 (ENSNLEG00000000910) #24	SNX20 (ENSNLEG00000033286) #25	NKD1 (ENSNLEG00000029864) #26	BRD7 (ENSNLEG00000000834) #28	ADCY7 (ENSNLEG00000000816) #29	TENT4B (ENSNLEG00000000797) #30	HEATR3 (ENSNLEG00000000745) #31	CNEP1R1 (ENSNLEG00000034194)	ZNF423 (ENSNLEG00000000697) #32	C16orf78 (ENSNLEG00000027879) #33	CBLN1 (ENSNLEG00000000675) #34	N4BP1 (ENSNLEG00000000653) #35	ENSNLEG00000033251	SIAH1 (ENSNLEG00000035150) #36
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00390000016567.f	ENSGT00940000154837.f #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125.k #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00390000016567.f	ENSGT00940000154837.f #36
Gorilla	MODERN SPECIES	7	SLC6A2 (ENSGGOG00000005154)	LPCAT2 (ENSGGOG00000005144) #8	MMP2 (ENSGGOG00000021966) #9	IRX6 (ENSGGOG00000004496) #10	IRX5 (ENSGGOG00000027776) #11	ENSGGOG00000036175	IRX3 (ENSGGOG00000014067) #13	FTO (ENSGGOG00000011151) #14	RPGRIP1L (ENSGGOG00000011141) #15	AKTIP (ENSGGOG00000014821) #16	RBL2 (ENSGGOG00000025953) #17	CHD9 (ENSGGOG00000014816) #19	CHD9NB (ENSGGOG00000037829)	ENSGGOG00000036262	TOX3 (ENSGGOG00000009117) #20	SALL1 (ENSGGOG00000000663) #22	CYLD (ENSGGOG00000008448) #23	NOD2 (ENSGGOG00000010795) #24	SNX20 (ENSGGOG00000042612) #25	NKD1 (ENSGGOG00000008141) #26	ENSGGOG00000014824 #28	ADCY7 (ENSGGOG00000014807) #29	TENT4B (ENSGGOG00000006316) #30	HEATR3 (ENSGGOG00000000878) #31	CNEP1R1 (ENSGGOG00000025211)	ZNF423 (ENSGGOG00000016641) #32	C16orf78 (ENSGGOG00000008081) #33	CBLN1 (ENSGGOG00000015205) #34	N4BP1 (ENSGGOG00000015565) #35	ENSGGOG00000026977	SIAH1 (ENSGGOG00000000938) #36
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125.k #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00390000016567.f	ENSGT00940000154837.f #36
Human	MODERN SPECIES	7	SLC6A2 (ENSG00000103546)	CAPNS2 (ENSG00000256812)	LPCAT2 (ENSG00000087253) #8	MMP2 (ENSG00000087245) #9	IRX6 (ENSG00000159387) #10	IRX5 (ENSG00000176842) #11	IRX3 (ENSG00000177508) #13	FTO (ENSG00000140718) #14	RPGRIP1L (ENSG00000103494) #15	AKTIP (ENSG00000166971) #16	RBL2 (ENSG00000103479) #17	CHD9 (ENSG00000177200) #19	CHD9NB (ENSG00000277639)	TOX3 (ENSG00000103460) #20	HNRNPA1L3 (ENSG00000224578)	SALL1 (ENSG00000103449) #22	CYLD (ENSG00000083799) #23	NOD2 (ENSG00000167207) #24	SNX20 (ENSG00000167208) #25	NKD1 (ENSG00000140807) #26	BRD7 (ENSG00000166164) #28	ADCY7 (ENSG00000121281) #29	TENT4B (ENSG00000121274) #30	HEATR3 (ENSG00000155393) #31	CNEP1R1 (ENSG00000205423)	ZNF423 (ENSG00000102935) #32	C16orf78 (ENSG00000166152) #33	CBLN1 (ENSG00000102924) #34	N4BP1 (ENSG00000102921) #35	SIAH1 (ENSG00000196470) #36	LONP2 (ENSG00000102910) #37
Pan	ANCESTRAL SPECIES	19	ENSGT00940000154623.d	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00910000146868	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125.k #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT01030000234542.b.a.a.a.b.b	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576.g.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00390000016567.f	ENSGT00940000154837.f #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	7	CES1 (ENSPTRG00000022723)	SLC6A2 (ENSPTRG00000008126)	LPCAT2 (ENSPTRG00000008124) #8	MMP2 (ENSPTRG00000008123) #9	IRX6 (ENSPTRG00000008122) #10	IRX5 (ENSPTRG00000044627) #11	ENSPTRG00000043727	IRX3 (ENSPTRG00000008120) #13	FTO (ENSPTRG00000008118) #14	RPGRIP1L (ENSPTRG00000008117) #15	AKTIP (ENSPTRG00000008116) #16	RBL2 (ENSPTRG00000008115) #17	CHD9 (ENSPTRG00000008113) #19	ENSPTRG00000045090	TOX3 (ENSPTRG00000008110) #20	SALL1 (ENSPTRG00000008108) #22	CYLD (ENSPTRG00000008107) #23	NOD2 (ENSPTRG00000008106) #24	SNX20 (ENSPTRG00000008105) #25	NKD1 (ENSPTRG00000008104) #26	BRD7 (ENSPTRG00000008103) #28	ADCY7 (ENSPTRG00000008102) #29	TENT4B (ENSPTRG00000008101) #30	HEATR3 (ENSPTRG00000008100) #31	CNEP1R1 (ENSPTRG00000041682)	ZNF423 (ENSPTRG00000008099) #32	C16H16orf78 (ENSPTRG00000008098) #33	CBLN1 (ENSPTRG00000008097) #34	N4BP1 (ENSPTRG00000008096) #35	ENSPTRG00000051824	SIAH1 (ENSPTRG00000008094) #36
Chimpanzee	MODERN SPECIES	972	MAGED1 (ENSPTRG00000021914)	ENSPTRG00000046536	ENSPTRG00000047771	CENPVL3 (ENSPTRG00000051936)	ENSPTRG00000046232	ENSPTRG00000050633	ENSPTRG00000044134	BMP15 (ENSPTRG00000021908)	SHROOM4 (ENSPTRG00000021905)	DGKK (ENSPTRG00000048026)	CCNB3 (ENSPTRG00000048758)	AKAP4 (ENSPTRG00000049957)	CLCN5 (ENSPTRG00000021899)	PAGE4 (ENSPTRG00000021896)	ENSPTRG00000021894	ENSPTRG00000045256 #22	ENSPTRG00000048439	GAGE10 (ENSPTRG00000021892)	PPP1R3F (ENSPTRG00000046513)	FOXP3 (ENSPTRG00000021890)	CCDC22 (ENSPTRG00000021889)	ENSPTRG00000049813	CACNA1F (ENSPTRG00000021888)	SYP (ENSPTRG00000021887)	PRICKLE3 (ENSPTRG00000045748)	PLP2 (ENSPTRG00000021885)	MAGIX (ENSPTRG00000047576)	GPKOW (ENSPTRG00000047603)	WDR45 (ENSPTRG00000021882)	CCDC120 (ENSPTRG00000021880)	TFE3 (ENSPTRG00000021879)
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	7	SLC6A2 (ENSPPAG00000030886)	LPCAT2 (ENSPPAG00000031029) #8	MMP2 (ENSPPAG00000040209) #9	IRX6 (ENSPPAG00000016478) #10	IRX5 (ENSPPAG00000033596) #11	ENSPPAG00000041131	IRX3 (ENSPPAG00000004040) #13	FTO (ENSPPAG00000028022) #14	RPGRIP1L (ENSPPAG00000039576) #15	AKTIP (ENSPPAG00000031822) #16	RBL2 (ENSPPAG00000037125) #17	ENSPPAG00000039388 #19	ENSPPAG00000028107 #19	ENSPPAG00000030984	TOX3 (ENSPPAG00000042135) #20	SALL1 (ENSPPAG00000035657) #22	CYLD (ENSPPAG00000027949) #23	NOD2 (ENSPPAG00000042973) #24	SNX20 (ENSPPAG00000031596) #25	ENSPPAG00000017627 #26	BRD7 (ENSPPAG00000038742) #28	ADCY7 (ENSPPAG00000026254) #29	TENT4B (ENSPPAG00000033650) #30	HEATR3 (ENSPPAG00000040469) #31	CNEP1R1 (ENSPPAG00000028006)	ZNF423 (ENSPPAG00000038999) #32	C16orf78 (ENSPPAG00000030795) #33	CBLN1 (ENSPPAG00000037058) #34	N4BP1 (ENSPPAG00000034858) #35	ENSPPAG00000030753	SIAH1 (ENSPPAG00000031633) #36
Bonobo	MODERN SPECIES	369	ENSPPAG00000041779	ENSPPAG00000027565	MAGED1 (ENSPPAG00000037605)	CENPVL3 (ENSPPAG00000005217)	EZHIP (ENSPPAG00000005586)	ENSPPAG00000022094	BMP15 (ENSPPAG00000005038)	SHROOM4 (ENSPPAG00000039023)	DGKK (ENSPPAG00000034077)	CCNB3 (ENSPPAG00000027314)	AKAP4 (ENSPPAG00000034394)	CLCN5 (ENSPPAG00000029912)	USP27X (ENSPPAG00000012284)	PAGE4 (ENSPPAG00000037679)	PAGE1 (ENSPPAG00000030309)	ENSPPAG00000035136 #22	ENSPPAG00000043153	ENSPPAG00000027179	ENSPPAG00000027948	FOXP3 (ENSPPAG00000028117)	CCDC22 (ENSPPAG00000039638)	CACNA1F (ENSPPAG00000027619)	SYP (ENSPPAG00000033248)	PRICKLE3 (ENSPPAG00000040750)	PLP2 (ENSPPAG00000040820)	MAGIX (ENSPPAG00000037324)	GPKOW (ENSPPAG00000040116)	WDR45 (ENSPPAG00000042027)	CCDC120 (ENSPPAG00000026576)	TFE3 (ENSPPAG00000028832)	GRIPAP1 (ENSPPAG00000040230)
Tarsier	MODERN SPECIES	4177																SALL1 (ENSTSYG00000029464) #22	CYLD (ENSTSYG00000008717) #23	NOD2 (ENSTSYG00000030355) #24	SNX20 (ENSTSYG00000037310) #25	NKD1 (ENSTSYG00000008581) #26	BRD7 (ENSTSYG00000003829) #28	ADCY7 (ENSTSYG00000034052) #29	ENSTSYG00000009001 #30	HEATR3 (ENSTSYG00000008392) #31	ENSTSYG00000027545
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000161596	ENSGT00940000154623	ENSGT00940000158564 #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.q #36	ENSGT00530000063553.b.b #37
Lemuriformes	ANCESTRAL SPECIES	69				ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.q #36	ENSGT00530000063553.b.b #37
Lemuriformes_a	ANCESTRAL SPECIES	151														ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.q #36	ENSGT00530000063553.b.b #37
Coquerels sifaka	MODERN SPECIES	260													CHD9 (ENSPCOG00000028433) #19	ENSPCOG00000026724	TOX3 (ENSPCOG00000006464) #20	SALL1 (ENSPCOG00000028192) #22	CYLD (ENSPCOG00000028255) #23	NOD2 (ENSPCOG00000027246) #24	SNX20 (ENSPCOG00000024752) #25	NKD1 (ENSPCOG00000021629) #26	BRD7 (ENSPCOG00000017346) #28	ADCY7 (ENSPCOG00000024234) #29	TENT4B (ENSPCOG00000015505) #30	HEATR3 (ENSPCOG00000025339) #31	CNEP1R1 (ENSPCOG00000027939)	ZNF423 (ENSPCOG00000013159) #32
Mouse lemur	MODERN SPECIES	12	ENSMICG00000003822	SLC6A2 (ENSMICG00000003810)	LPCAT2 (ENSMICG00000003798) #8	MMP2 (ENSMICG00000003792) #9	IRX6 (ENSMICG00000003780) #10	IRX5 (ENSMICG00000027848) #11	IRX3 (ENSMICG00000016860) #13	FTO (ENSMICG00000016837) #14	ENSMICG00000038175	RPGRIP1L (ENSMICG00000016808) #15	ENSMICG00000010810 #16	RBL2 (ENSMICG00000016772) #17	ENSMICG00000009260 #7	CHD9 (ENSMICG00000016679) #19	TOX3 (ENSMICG00000014881) #20	SALL1 (ENSMICG00000036486) #22	CYLD (ENSMICG00000008179) #23	NOD2 (ENSMICG00000008172) #24	SNX20 (ENSMICG00000044589) #25	VPS35 (ENSMICG00000011393)	ORC6 (ENSMICG00000028393)	MYLK3 (ENSMICG00000046381)	C16orf87 (ENSMICG00000005922)	GPT2 (ENSMICG00000013187)	ENSMICG00000043798	DNAJA2 (ENSMICG00000017777)	NETO2 (ENSMICG00000029065)	ITFG1 (ENSMICG00000012296)	PHKB (ENSMICG00000012314)	ENSMICG00000036396	ENSMICG00000026987
Bushbaby	MODERN SPECIES	173	CES5A (ENSOGAG00000012524)	ENSOGAG00000014900 #7	ENSOGAG00000012518 #7	SLC6A2 (ENSOGAG00000004224)	LPCAT2 (ENSOGAG00000004221) #8	MMP2 (ENSOGAG00000030370) #9	IRX6 (ENSOGAG00000026649) #10	IRX5 (ENSOGAG00000004133) #11	IRX3 (ENSOGAG00000029236) #13	FTO (ENSOGAG00000005135) #14	RPGRIP1L (ENSOGAG00000005128) #15	AKTIP (ENSOGAG00000014495) #16	RBL2 (ENSOGAG00000014491) #17	CHD9 (ENSOGAG00000002110) #19	TOX3 (ENSOGAG00000009531) #20	SALL1 (ENSOGAG00000027316) #22	CYLD (ENSOGAG00000014666) #23	NOD2 (ENSOGAG00000014655) #24	SNX20 (ENSOGAG00000014652) #25	NKD1 (ENSOGAG00000024948) #26	BRD7 (ENSOGAG00000011289) #28	ADCY7 (ENSOGAG00000011284) #29	TENT4B (ENSOGAG00000011282) #30	HEATR3 (ENSOGAG00000011658) #31	CNEP1R1 (ENSOGAG00000015665)	ZNF423 (ENSOGAG00000029813) #32	C16orf78 (ENSOGAG00000012618) #33	CBLN1 (ENSOGAG00000026093) #34	N4BP1 (ENSOGAG00000012341) #35	ENSOGAG00000027052 #36	LONP2 (ENSOGAG00000000674) #37
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00390000008759	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Tree shrew	MODERN SPECIES	7676																ENSTBEG00000002119 #22
Glires	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000155938 #22
Pika	MODERN SPECIES	5829																SALL1 (ENSOPRG00000005645) #22
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.a #7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158564.d #7	ENSGT00940000158564.c.a.a #7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000154623.j.b	ENSGT00940000154623.i.a	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000154623.j.a	ENSGT00940000154623.i.a	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090
Long-tailed chinchilla	MODERN SPECIES	140	CES1 (ENSCLAG00000005623)	ENSCLAG00000006039 #7	SLC6A2 (ENSCLAG00000005787)	LPCAT2 (ENSCLAG00000004725) #8	MMP2 (ENSCLAG00000004390) #9	IRX6 (ENSCLAG00000008231) #10	IRX5 (ENSCLAG00000009884) #11	IRX3 (ENSCLAG00000013650) #13	FTO (ENSCLAG00000013952) #14	RPGRIP1L (ENSCLAG00000004568) #15	AKTIP (ENSCLAG00000006949) #16	RBL2 (ENSCLAG00000005451) #17	ENSCLAG00000005008	CHD9 (ENSCLAG00000007137) #19	TOX3 (ENSCLAG00000006478) #20	SALL1 (ENSCLAG00000006380) #22	CYLD (ENSCLAG00000010166) #23	NOD2 (ENSCLAG00000009024) #24	SNX20 (ENSCLAG00000008955) #25	NKD1 (ENSCLAG00000008184) #26	BRD7 (ENSCLAG00000007993) #28	ADCY7 (ENSCLAG00000006365) #29	TENT4B (ENSCLAG00000004921) #30	HEATR3 (ENSCLAG00000004335) #31	ENSCLAG00000003975	ZNF423 (ENSCLAG00000007342) #32	ENSCLAG00000011514 #33	CBLN1 (ENSCLAG00000014044) #34	ENSCLAG00000013152	SEC31A (ENSCLAG00000011336)	SCD5 (ENSCLAG00000009253)
Degu	MODERN SPECIES	214													TOX3 (ENSODEG00000003744) #20	ENSODEG00000003720	ENSODEG00000003699	SALL1 (ENSODEG00000003685) #22	CYLD (ENSODEG00000003603) #23	NOD2 (ENSODEG00000003540) #24	SNX20 (ENSODEG00000003520) #25	NKD1 (ENSODEG00000003504) #26	ENSODEG00000018926	BRD7 (ENSODEG00000003460) #28	ADCY7 (ENSODEG00000002761) #29	TENT4B (ENSODEG00000002528) #30	HEATR3 (ENSODEG00000002446) #31	CNEP1R1 (ENSODEG00000002403)	ENSODEG00000018831	ZNF423 (ENSODEG00000002057) #32	ENSODEG00000001942 #33	CBLN1 (ENSODEG00000001925) #34	ENSODEG00000002724
Guinea pig	MODERN SPECIES	5	CDC16 (ENSCPOG00000005324)	UPF3A (ENSCPOG00000006824)	ENSCPOG00000032917	SLC6A2 (ENSCPOG00000002271)	LPCAT2 (ENSCPOG00000002265) #8	MMP2 (ENSCPOG00000020846) #9	IRX6 (ENSCPOG00000013677) #10	IRX5 (ENSCPOG00000011984) #11	IRX3 (ENSCPOG00000034825) #13	FTO (ENSCPOG00000012935) #14	RPGRIP1L (ENSCPOG00000012922) #15	ENSCPOG00000006523	RBL2 (ENSCPOG00000006507) #17	CHD9 (ENSCPOG00000036544) #19	ENSCPOG00000003093	SALL1 (ENSCPOG00000006564) #22	CYLD (ENSCPOG00000010061) #23	NOD2 (ENSCPOG00000010054) #24	SNX20 (ENSCPOG00000031640) #25	NKD1 (ENSCPOG00000002660) #26	BRD7 (ENSCPOG00000015462) #28	ADCY7 (ENSCPOG00000003271) #29	TENT4B (ENSCPOG00000011799) #30	HEATR3 (ENSCPOG00000013804) #31	CNEP1R1 (ENSCPOG00000036484)	ZNF423 (ENSCPOG00000000162) #32	ENSCPOG00000020523 #33	CBLN1 (ENSCPOG00000035039) #34	THAP9 (ENSCPOG00000030627)	SEC31A (ENSCPOG00000007967)	SCD5 (ENSCPOG00000003242)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	26	LPCAT2 (ENSHGLG00000006950) #8	MMP2 (ENSHGLG00000003708) #9	IRX6 (ENSHGLG00000003805) #10	IRX5 (ENSHGLG00000004006) #11	IRX3 (ENSHGLG00000004630) #13	FTO (ENSHGLG00000005386) #14	ENSHGLG00000050695	RPGRIP1L (ENSHGLG00000008154) #15	AKTIP (ENSHGLG00000008426) #16	RBL2 (ENSHGLG00000012893) #17	ENSHGLG00000014938 #19	ENSHGLG00000003452	ENSHGLG00000003522	ENSHGLG00000003699	ENSHGLG00000046400 #20	ENSHGLG00000004288 #22	ENSHGLG00000005762 #23	NOD2 (ENSHGLG00000003967) #24	SNX20 (ENSHGLG00000004254) #25	NKD1 (ENSHGLG00000041852) #26	BRD7 (ENSHGLG00000005800) #28	ADCY7 (ENSHGLG00000006152) #29	TENT4B (ENSHGLG00000004206) #30	HEATR3 (ENSHGLG00000004488) #31	CNEP1R1 (ENSHGLG00000046645)	ENSHGLG00000021434	ZNF423 (ENSHGLG00000007674) #32	ENSHGLG00000008302 #33	CBLN1 (ENSHGLG00000039996) #34	ENSHGLG00000014792	ENSHGLG00000045263
Naked mole-rat female	MODERN SPECIES	5	HOXA13 (ENSHGLG00000039960)	EVX1 (ENSHGLG00000005868)	HIBADH (ENSHGLG00000005354)	ENSHGLG00000047390	ENSHGLG00000016256	JAZF1 (ENSHGLG00000049016)	ENSHGLG00000016063	CREB5 (ENSHGLG00000018417)	TRIL (ENSHGLG00000037451)	CPVL (ENSHGLG00000016195)	CHN2 (ENSHGLG00000033880)	ENSHGLG00000017765	PRR15 (ENSHGLG00000047965)	SCRN1 (ENSHGLG00000008257)	FKBP14 (ENSHGLG00000006567)	ENSHGLG00000007305 #22	PLEKHA8 (ENSHGLG00000005404)	ENSHGLG00000011844	MTURN (ENSHGLG00000044384)	ENSHGLG00000016122	ZNRF2 (ENSHGLG00000039084)	ENSHGLG00000032561	GGCT (ENSHGLG00000034422)	GARS1 (ENSHGLG00000016342)	CRHR2 (ENSHGLG00000018699)	ENSHGLG00000049417	INMT (ENSHGLG00000035929)	MINDY4 (ENSHGLG00000004247)	AQP1 (ENSHGLG00000045736)	ENSHGLG00000035477	ADCYAP1R1 (ENSHGLG00000005424)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000175746.a.a
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000175746.a.a.a
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000158564.c.a.c.a #7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00960000190798	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000175746.a.a.a
Arctic ground squirrel	MODERN SPECIES	99	ENSUPAG00010015119 #7	ENSUPAG00010014531 #7	SLC6A2 (ENSUPAG00010014487)	LPCAT2 (ENSUPAG00010014437) #8	MMP2 (ENSUPAG00010014403) #9	IRX6 (ENSUPAG00010014372) #10	IRX5 (ENSUPAG00010014365) #11	IRX3 (ENSUPAG00010014349) #13	FTO (ENSUPAG00010014295) #14	RPGRIP1L (ENSUPAG00010014243) #15	AKTIP (ENSUPAG00010014223) #16	RBL2 (ENSUPAG00010014149) #17	CHD9 (ENSUPAG00010014099) #19	CHD9NB (ENSUPAG00010014093)	TOX3 (ENSUPAG00010014088) #20	SALL1 (ENSUPAG00010014078) #22	CYLD (ENSUPAG00010013856) #23	NOD2 (ENSUPAG00010013810) #24	SNX20 (ENSUPAG00010013805) #25	NKD1 (ENSUPAG00010013779) #26	ENSUPAG00010013770	BRD7 (ENSUPAG00010013735) #28	ADCY7 (ENSUPAG00010013680) #29	TENT4B (ENSUPAG00010013654) #30	ENSUPAG00010013643	ENSUPAG00010013639	HEATR3 (ENSUPAG00010013623) #31	CNEP1R1 (ENSUPAG00010013602)
Squirrel	MODERN SPECIES	75	ENSSTOG00000022544 #7	ENSSTOG00000011565 #7	ENSSTOG00000027091 #7	SLC6A2 (ENSSTOG00000011549)	LPCAT2 (ENSSTOG00000011536) #8	MMP2 (ENSSTOG00000022615) #9	IRX6 (ENSSTOG00000015121) #10	IRX5 (ENSSTOG00000023408) #11	IRX3 (ENSSTOG00000019902) #13	FTO (ENSSTOG00000023410) #14	RPGRIP1L (ENSSTOG00000012672) #15	AKTIP (ENSSTOG00000008656) #16	RBL2 (ENSSTOG00000008636) #17	CHD9 (ENSSTOG00000022273) #19	TOX3 (ENSSTOG00000009587) #20	SALL1 (ENSSTOG00000020885) #22	CYLD (ENSSTOG00000010194) #23	NOD2 (ENSSTOG00000025139) #24	SNX20 (ENSSTOG00000031296) #25	NKD1 (ENSSTOG00000027729) #26	BRD7 (ENSSTOG00000024547) #28	ADCY7 (ENSSTOG00000001199) #29	ENSSTOG00000001196 #30	HEATR3 (ENSSTOG00000001183) #31	CNEP1R1 (ENSSTOG00000001179)	ZNF423 (ENSSTOG00000028569) #32	ENSSTOG00000005303 #33	CBLN1 (ENSSTOG00000027557) #34	N4BP1 (ENSSTOG00000006205) #35	SIAH1 (ENSSTOG00000008805) #36	LONP2 (ENSSTOG00000008780) #37
Alpin marmot	MODERN SPECIES	23	ENSMMMG00000011414 #7	ENSMMMG00000011513 #7	SLC6A2 (ENSMMMG00000011536)	LPCAT2 (ENSMMMG00000011587) #8	MMP2 (ENSMMMG00000011634) #9	IRX6 (ENSMMMG00000011652) #10	IRX5 (ENSMMMG00000011673) #11	IRX3 (ENSMMMG00000011681) #13	FTO (ENSMMMG00000011704) #14	RPGRIP1L (ENSMMMG00000011727) #15	AKTIP (ENSMMMG00000011767) #16	RBL2 (ENSMMMG00000011833) #17	CHD9 (ENSMMMG00000012811) #19	CHD9NB (ENSMMMG00000012935)	TOX3 (ENSMMMG00000012986) #20	SALL1 (ENSMMMG00000013047) #22	CYLD (ENSMMMG00000013093) #23	NOD2 (ENSMMMG00000013415) #24	SNX20 (ENSMMMG00000013445) #25	NKD1 (ENSMMMG00000013451) #26	BRD7 (ENSMMMG00000013473) #28	ADCY7 (ENSMMMG00000013505) #29	ENSMMMG00000014304 #30	HEATR3 (ENSMMMG00000014311) #31	CNEP1R1 (ENSMMMG00000014341)	ZNF423 (ENSMMMG00000014383) #32	ENSMMMG00000014403 #33	CBLN1 (ENSMMMG00000014438) #34	N4BP1 (ENSMMMG00000014453) #35	ENSMMMG00000014456	ENSMMMG00000014468
Eurasian red squirrel	MODERN SPECIES	8	SLC6A2 (ENSSVLG00005025519)	LPCAT2 (ENSSVLG00005025612) #8	MMP2 (ENSSVLG00005025625) #9	IRX6 (ENSSVLG00005025641) #10	IRX5 (ENSSVLG00005025650) #11	IRX3 (ENSSVLG00005025657) #13	FTO (ENSSVLG00005025671) #14	ENSSVLG00005025681	RPGRIP1L (ENSSVLG00005025692) #15	ENSSVLG00005025703 #16	RBL2 (ENSSVLG00005025712) #17	CHD9 (ENSSVLG00005025759) #19	CHD9NB (ENSSVLG00005025793)	ENSSVLG00005025795	TOX3 (ENSSVLG00005025797) #20	SALL1 (ENSSVLG00005025799) #22	CYLD (ENSSVLG00005025804) #23	NOD2 (ENSSVLG00005025812) #24	SNX20 (ENSSVLG00005025820) #25	NKD1 (ENSSVLG00005025829) #26	ENSSVLG00005025838 #28	ADCY7 (ENSSVLG00005025857) #29	TENT4B (ENSSVLG00005025875) #30	HEATR3 (ENSSVLG00005025878) #31	ENSSVLG00005025884	ENSSVLG00005025890	ENSSVLG00005025893	ENSSVLG00005025899	ZNF423 (ENSSVLG00005016875) #32	ENSSVLG00005016966 #33	CBLN1 (ENSSVLG00005017023) #34
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Kangaroo rat	MODERN SPECIES	425	Slc6a2 (ENSDORG00000009330)	Capns2 (ENSDORG00000027062)	Lpcat2 (ENSDORG00000013193) #8	ENSDORG00000013188 #9	Irx6 (ENSDORG00000012265) #10	Irx5 (ENSDORG00000005903) #11	Irx3 (ENSDORG00000011798) #13	Fto (ENSDORG00000009325) #14	ENSDORG00000023916	Rpgrip1l (ENSDORG00000009323) #15	Aktip (ENSDORG00000009519) #16	Rbl2 (ENSDORG00000009516) #17	ENSDORG00000008523 #19	ENSDORG00000026215 #19	Tox3 (ENSDORG00000003305) #20	ENSDORG00000004249 #22	Cyld (ENSDORG00000004192) #23	Nod2 (ENSDORG00000026607) #24	ENSDORG00000029324 #25	Nkd1 (ENSDORG00000008529) #26	Brd7 (ENSDORG00000010508) #28	Adcy7 (ENSDORG00000010503) #29	Tent4b (ENSDORG00000000031) #30	Heatr3 (ENSDORG00000004409) #31	ENSDORG00000026472	Zfp423 (ENSDORG00000023772) #32	ENSDORG00000001017 #33	Cbln1 (ENSDORG00000025356) #34	ENSDORG00000024454	N4bp1 (ENSDORG00000002154) #35	ENSDORG00000025633 #36
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.a #36	ENSGT00530000063553.b.b #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.a #36	ENSGT00530000063553.b.b #37
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938.s #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.a #36	ENSGT00530000063553.b.b #37
Chinese hamster chok1gshd	MODERN SPECIES	112	Irx6 (ENSCGRG00001005135) #10	ENSCGRG00001021640	Irx5 (ENSCGRG00001019317) #11	Irx3 (ENSCGRG00001022254) #13	Fto (ENSCGRG00001013545) #14	Rpgrip1l (ENSCGRG00001020196) #15	ENSCGRG00001013457	ENSCGRG00001024361 #16	Rbl2 (ENSCGRG00001012793) #17	Chd9 (ENSCGRG00001016150) #19	ENSCGRG00001012667	Gm19935 (ENSCGRG00001012263)	ENSCGRG00001010471	ENSCGRG00001001946	Tox3 (ENSCGRG00001021816) #20	ENSCGRG00001023314 #22	ENSCGRG00001019423	Cyld (ENSCGRG00001000533) #23	Nod2 (ENSCGRG00001011531) #24	Snx20 (ENSCGRG00001020312) #25	Nkd1 (ENSCGRG00001011787) #26	Brd7 (ENSCGRG00001003449) #28	Adcy7 (ENSCGRG00001014504) #29	Tent4b (ENSCGRG00001023597) #30	Heatr3 (ENSCGRG00001024755) #31	Cnep1r1 (ENSCGRG00001009199)	Zfp423 (ENSCGRG00001023063) #32	4933402J07Rik (ENSCGRG00001021069) #33	Cbln1 (ENSCGRG00001018308) #34	N4bp1 (ENSCGRG00001014095) #35	Siah1b (ENSCGRG00001006463) #36
Golden Hamster	MODERN SPECIES	706	ENSMAUG00000013993	Ces1a (ENSMAUG00000011697) #7	Slc6a2 (ENSMAUG00000004570)	Lpcat2 (ENSMAUG00000016612) #8	Mmp2 (ENSMAUG00000010513) #9	Irx6 (ENSMAUG00000009996) #10	Irx5 (ENSMAUG00000007656) #11	Irx3 (ENSMAUG00000017323) #13	Fto (ENSMAUG00000000439) #14	Rpgrip1l (ENSMAUG00000017292) #15	Rbl2 (ENSMAUG00000014633) #17	ENSMAUG00000000526 #19	ENSMAUG00000011087 #19	ENSMAUG00000018971	Tox3 (ENSMAUG00000000550) #20	Sall1 (ENSMAUG00000019093) #22	ENSMAUG00000018753	Cyld (ENSMAUG00000001344) #23	Nod2 (ENSMAUG00000004325) #24	Snx20 (ENSMAUG00000020254) #25	Nkd1 (ENSMAUG00000000515) #26	Brd7 (ENSMAUG00000000695) #28	Adcy7 (ENSMAUG00000005638) #29	Tent4b (ENSMAUG00000018042) #30	Heatr3 (ENSMAUG00000020748) #31	Cnep1r1 (ENSMAUG00000012481)	ENSMAUG00000013750	Zfp423 (ENSMAUG00000015448) #32	ENSMAUG00000019410	ENSMAUG00000015721	4933402J07Rik (ENSMAUG00000017355) #33
Cricetinae	ANCESTRAL SPECIES																	ENSGT00940000155938.t #22
Chinese hamster chok1gshd	MODERN SPECIES	66							Gbp2 (ENSCGRG00001023495)	Gbp3 (ENSCGRG00001022090)	Gbp7 (ENSCGRG00001000702)	Gbp5 (ENSCGRG00001014326)	Pdlim5 (ENSCGRG00001025015)	Bmpr1b (ENSCGRG00001019865)	Unc5c (ENSCGRG00001024324)	Pdha2 (ENSCGRG00001012024)	Stpg2 (ENSCGRG00001011952)	ENSCGRG00001006395 #22	Rap1gds1 (ENSCGRG00001017066)	Tspan5 (ENSCGRG00001001260)	ENSCGRG00001000181	Metap1 (ENSCGRG00001002302)	Adh5 (ENSCGRG00001000437)	Adh6b (ENSCGRG00001011022)	ENSCGRG00001012224	Adh6a (ENSCGRG00001013383)	ENSCGRG00001000595	ENSCGRG00001017351	Adh7 (ENSCGRG00001008109)	4930579F01Rik (ENSCGRG00001000415)	Trmt10a (ENSCGRG00001020257)	Mttp (ENSCGRG00001013195)	1110002E22Rik (ENSCGRG00001005404)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00390000015797.d	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.a #36	ENSGT00530000063553.b.b #37
Northern American deer mouse	MODERN SPECIES	18	Lpcat2 (ENSPEMG00000024158) #8	Mmp2 (ENSPEMG00000023486) #9	Irx6 (ENSPEMG00000022413) #10	Irx5 (ENSPEMG00000021761) #11	Irx3 (ENSPEMG00000022357) #13	Fto (ENSPEMG00000021137) #14	Rpgrip1l (ENSPEMG00000021815) #15	Aktip (ENSPEMG00000022468) #16	Rbl2 (ENSPEMG00000021671) #17	Chd9 (ENSPEMG00000021464) #19	ENSPEMG00000028298	Gm19935 (ENSPEMG00000026446)	Tox3 (ENSPEMG00000019689) #20	ENSPEMG00000026839	ENSPEMG00000005035	Sall1 (ENSPEMG00000012331) #22	Cyld (ENSPEMG00000011322) #23	Nod2 (ENSPEMG00000016933) #24	Snx20 (ENSPEMG00000015231) #25	Nkd1 (ENSPEMG00000028031) #26	Brd7 (ENSPEMG00000015843) #28	Adcy7 (ENSPEMG00000018675) #29	Tent4b (ENSPEMG00000029372) #30	Heatr3 (ENSPEMG00000016174) #31	Cnep1r1 (ENSPEMG00000017702)	ENSPEMG00000002704	Zfp423 (ENSPEMG00000015523) #32	4933402J07Rik (ENSPEMG00000016843) #33	Cbln1 (ENSPEMG00000029511) #34	N4bp1 (ENSPEMG00000016429) #35	Siah1b (ENSPEMG00000008065) #36
Prairie vole	MODERN SPECIES	98														Tox3 (ENSMOCG00000019988) #20	ENSMOCG00000004921	ENSMOCG00000002231 #22	ENSMOCG00000009848	Nod2 (ENSMOCG00000021721) #24	Snx20 (ENSMOCG00000015078) #25	Nkd1 (ENSMOCG00000019054) #26	Brd7 (ENSMOCG00000022495) #28	Adcy7 (ENSMOCG00000000434) #29	ENSMOCG00000016736	Tent4b (ENSMOCG00000013042) #30	Heatr3 (ENSMOCG00000019132) #31	ENSMOCG00000019184	Zfp423 (ENSMOCG00000002689) #32	4933402J07Rik (ENSMOCG00000020575) #33	Cbln1 (ENSMOCG00000003934) #34	ENSMOCG00000017947	N4bp1 (ENSMOCG00000016652) #35
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.b #36	ENSGT00530000063553.b.b #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.b #36	ENSGT00530000063553.b.b #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.b #36	ENSGT00860000136300
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00980000198839	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.b #36	ENSGT00860000136300
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000158564.c.b #7	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00900000143414	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f.y.b #36	ENSGT00860000136300
spretus	MODERN SPECIES	17	Slc6a2 (MGP_SPRETEiJ_G0032495)	Capns2 (MGP_SPRETEiJ_G0032494)	Lpcat2 (MGP_SPRETEiJ_G0032493) #8	Mmp2 (MGP_SPRETEiJ_G0032492) #9	Irx6 (MGP_SPRETEiJ_G0032491) #10	Irx5 (MGP_SPRETEiJ_G0032490) #11	Irx3 (MGP_SPRETEiJ_G0032489) #13	Fto (MGP_SPRETEiJ_G0032488) #14	Rpgrip1l (MGP_SPRETEiJ_G0032487) #15	Aktip (MGP_SPRETEiJ_G0032486) #16	Rbl2 (MGP_SPRETEiJ_G0032485) #17	MGP_SPRETEiJ_G0032484	Chd9 (MGP_SPRETEiJ_G0032483) #19	Tox3 (MGP_SPRETEiJ_G0032482) #20	MGP_SPRETEiJ_G0032481	Sall1 (MGP_SPRETEiJ_G0032480) #22	Cyld (MGP_SPRETEiJ_G0032479) #23	Nod2 (MGP_SPRETEiJ_G0032478) #24	Snx20 (MGP_SPRETEiJ_G0032477) #25	Nkd1 (MGP_SPRETEiJ_G0032476) #26	Brd7 (MGP_SPRETEiJ_G0032475) #28	Adcy7 (MGP_SPRETEiJ_G0032474) #29	Tent4b (MGP_SPRETEiJ_G0032473) #30	Heatr3 (MGP_SPRETEiJ_G0032472) #31	Cnep1r1 (MGP_SPRETEiJ_G0032471)	Zfp423 (MGP_SPRETEiJ_G0032470) #32	4933402J07Rik (MGP_SPRETEiJ_G0032469) #33	Cbln1 (MGP_SPRETEiJ_G0032468) #34	N4bp1 (MGP_SPRETEiJ_G0032467) #35	MGP_SPRETEiJ_G0032466	MGP_SPRETEiJ_G0032465 #36
Steppe mouse	MODERN SPECIES	3333	Mmp2 (ENSMSIG00000022035) #9	Irx6 (ENSMSIG00000022060) #10	ENSMSIG00000022098 #11	ENSMSIG00000022154	Irx3 (ENSMSIG00000022187) #13	Fto (ENSMSIG00000022229) #14	Rpgrip1l (ENSMSIG00000022275) #15	Rbl2 (ENSMSIG00000022400) #17	Aktip (ENSMSIG00000022576) #16	Chd9 (ENSMSIG00000022627) #19	Gm19935 (ENSMSIG00000022743)	ENSMSIG00000022761 #18	Tox3 (ENSMSIG00000022770) #20	ENSMSIG00000022804	ENSMSIG00000022807	Sall1 (ENSMSIG00000022842) #22	Cyld (ENSMSIG00000022860) #23	Nod2 (ENSMSIG00000023038) #24	Snx20 (ENSMSIG00000023092) #25	Nkd1 (ENSMSIG00000023101) #26	Brd7 (ENSMSIG00000023142) #28	Adcy7 (ENSMSIG00000023201) #29
Mouse	MODERN SPECIES	17	Ces1a (ENSMUSG00000071047) #7	Slc6a2 (ENSMUSG00000055368)	Capns2 (ENSMUSG00000078144)	Lpcat2 (ENSMUSG00000033192) #8	Mmp2 (ENSMUSG00000031740) #9	Irx6 (ENSMUSG00000031738) #10	Irx5 (ENSMUSG00000031737) #11	Irx3 (ENSMUSG00000031734) #13	Fto (ENSMUSG00000055932) #14	Rpgrip1l (ENSMUSG00000033282) #15	Aktip (ENSMUSG00000031667) #16	Rbl2 (ENSMUSG00000031666) #17	Chd9 (ENSMUSG00000056608) #19	Gm19935 (ENSMUSG00000110332)	Tox3 (ENSMUSG00000043668) #20	Sall1 (ENSMUSG00000031665) #22	Cyld (ENSMUSG00000036712) #23	Nod2 (ENSMUSG00000055994) #24	Snx20 (ENSMUSG00000031662) #25	Nkd1 (ENSMUSG00000031661) #26	Brd7 (ENSMUSG00000031660) #28	Adcy7 (ENSMUSG00000031659) #29	Tent4b (ENSMUSG00000036779) #30	Heatr3 (ENSMUSG00000031657) #31	Cnep1r1 (ENSMUSG00000036810)	Zfp423 (ENSMUSG00000045333) #32	4933402J07Rik (ENSMUSG00000069971) #33	Cbln1 (ENSMUSG00000031654) #34	N4bp1 (ENSMUSG00000031652) #35	Siah1a (ENSMUSG00000036840) #36	Lonp2 (ENSMUSG00000047866) #37
Ryukyu mouse	MODERN SPECIES	17	Ces1a (MGP_CAROLIEiJ_G0031377) #7	Slc6a2 (MGP_CAROLIEiJ_G0031376)	Capns2 (MGP_CAROLIEiJ_G0031375)	Lpcat2 (MGP_CAROLIEiJ_G0031374) #8	Mmp2 (MGP_CAROLIEiJ_G0031373) #9	Irx6 (MGP_CAROLIEiJ_G0031372) #10	Irx5 (MGP_CAROLIEiJ_G0031371) #11	Irx3 (MGP_CAROLIEiJ_G0031370) #13	Fto (MGP_CAROLIEiJ_G0031369) #14	Rpgrip1l (MGP_CAROLIEiJ_G0031368) #15	Aktip (MGP_CAROLIEiJ_G0031367) #16	Rbl2 (MGP_CAROLIEiJ_G0031366) #17	MGP_CAROLIEiJ_G0031365	Chd9 (MGP_CAROLIEiJ_G0031364) #19	Tox3 (MGP_CAROLIEiJ_G0031363) #20	Sall1 (MGP_CAROLIEiJ_G0031362) #22	Cyld (MGP_CAROLIEiJ_G0031361) #23	Nod2 (MGP_CAROLIEiJ_G0031360) #24	Snx20 (MGP_CAROLIEiJ_G0031359) #25	Nkd1 (MGP_CAROLIEiJ_G0031358) #26	Brd7 (MGP_CAROLIEiJ_G0031357) #28	Adcy7 (MGP_CAROLIEiJ_G0031356) #29	Tent4b (MGP_CAROLIEiJ_G0031355) #30	Heatr3 (MGP_CAROLIEiJ_G0031354) #31	Cnep1r1 (MGP_CAROLIEiJ_G0031353)	Zfp423 (MGP_CAROLIEiJ_G0031352) #32	4933402J07Rik (MGP_CAROLIEiJ_G0031351) #33	Cbln1 (MGP_CAROLIEiJ_G0031350) #34	N4bp1 (MGP_CAROLIEiJ_G0031349) #35	MGP_CAROLIEiJ_G0031348	MGP_CAROLIEiJ_G0031347 #36
Shrew mouse	MODERN SPECIES	12	Ces1a (MGP_PahariEiJ_G0022976) #7	Slc6a2 (MGP_PahariEiJ_G0022975)	Capns2 (MGP_PahariEiJ_G0022974)	Lpcat2 (MGP_PahariEiJ_G0022973) #8	Mmp2 (MGP_PahariEiJ_G0022972) #9	Irx6 (MGP_PahariEiJ_G0022971) #10	Irx5 (MGP_PahariEiJ_G0022970) #11	Irx3 (MGP_PahariEiJ_G0022969) #13	Fto (MGP_PahariEiJ_G0022968) #14	Rpgrip1l (MGP_PahariEiJ_G0022967) #15	Aktip (MGP_PahariEiJ_G0022966) #16	Rbl2 (MGP_PahariEiJ_G0022965) #17	Chd9 (MGP_PahariEiJ_G0022964) #19	MGP_PahariEiJ_G0022963	Tox3 (MGP_PahariEiJ_G0022962) #20	Sall1 (MGP_PahariEiJ_G0022961) #22	Cyld (MGP_PahariEiJ_G0022960) #23	Nod2 (MGP_PahariEiJ_G0022959) #24	Snx20 (MGP_PahariEiJ_G0022958) #25	Nkd1 (MGP_PahariEiJ_G0022957) #26	Brd7 (MGP_PahariEiJ_G0022956) #28	Adcy7 (MGP_PahariEiJ_G0022955) #29	Tent4b (MGP_PahariEiJ_G0022954) #30	Zfp423 (MGP_PahariEiJ_G0022953) #32	4933402J07Rik (MGP_PahariEiJ_G0022952) #33	Cbln1 (MGP_PahariEiJ_G0022951) #34	N4bp1 (MGP_PahariEiJ_G0022950) #35	Siah1a (MGP_PahariEiJ_G0022949) #36	Lonp2 (MGP_PahariEiJ_G0022948) #37	Abcc12 (MGP_PahariEiJ_G0022947)	Phkb (MGP_PahariEiJ_G0022946)
Rat	MODERN SPECIES	10	Ces1c (ENSRNOG00000069004) #7	Ces1a (ENSRNOG00000039725) #7	Slc6a2 (ENSRNOG00000016311)	Lpcat2 (ENSRNOG00000016643) #8	Mmp2 (ENSRNOG00000016695) #9	Irx6 (ENSRNOG00000011037) #10	Irx5 (ENSRNOG00000011180) #11	Irx3 (ENSRNOG00000011533) #13	Fto (ENSRNOG00000011728) #14	Rpgrip1l (ENSRNOG00000011829) #15	Aktip (ENSRNOG00000011956) #16	Rbl2 (ENSRNOG00000012153) #17	Chd9 (ENSRNOG00000049302) #19	Tox3 (ENSRNOG00000028649) #20	ENSRNOG00000069574	Sall1 (ENSRNOG00000013907) #22	Cyld (ENSRNOG00000014048) #23	Nod2 (ENSRNOG00000014124) #24	Snx20 (ENSRNOG00000014202) #25	Nkd1 (ENSRNOG00000014293) #26	Brd7 (ENSRNOG00000014419) #28	Adcy7 (ENSRNOG00000014776) #29	Tent4b (ENSRNOG00000024212) #30	Heatr3 (ENSRNOG00000015459) #31	Cnep1r1 (ENSRNOG00000015534)	Zfp423 (ENSRNOG00000014658) #32	LOC680913 (ENSRNOG00000024182) #33	Cbln1 (ENSRNOG00000000010) #34	Rps15a-ps3 (ENSRNOG00000055046)	N4bp1 (ENSRNOG00000015121) #35	Siah1 (ENSRNOG00000015143) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	608																ENSNGAG00000014092 #22
Lesser Egyptian jerboa	MODERN SPECIES	114	Ces1a (ENSJJAG00000012358) #7	Slc6a2 (ENSJJAG00000022105)	Lpcat2 (ENSJJAG00000001079) #8	Mmp2 (ENSJJAG00000010703) #9	Irx6 (ENSJJAG00000003082) #10	Irx5 (ENSJJAG00000016102) #11	Irx3 (ENSJJAG00000021503) #13	Fto (ENSJJAG00000013186) #14	Rpgrip1l (ENSJJAG00000021992) #15	Aktip (ENSJJAG00000007409) #16	Rbl2 (ENSJJAG00000021032) #17	ENSJJAG00000015741 #19	ENSJJAG00000010948 #19	ENSJJAG00000015094	Tox3 (ENSJJAG00000022737) #20	ENSJJAG00000022677 #22	Cyld (ENSJJAG00000013829) #23	Nod2 (ENSJJAG00000017441) #24	Snx20 (ENSJJAG00000022175) #25	Nkd1 (ENSJJAG00000016347) #26	Brd7 (ENSJJAG00000024144) #28	Adcy7 (ENSJJAG00000010449) #29	Tent4b (ENSJJAG00000015670) #30	Heatr3 (ENSJJAG00000016795) #31	Cnep1r1 (ENSJJAG00000016846)	Zfp423 (ENSJJAG00000019328) #32	4933402J07Rik (ENSJJAG00000013910) #33	Cbln1 (ENSJJAG00000021584) #34	N4bp1 (ENSJJAG00000017340) #35	ENSJJAG00000016189 #36	ENSJJAG00000022493 #37
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000158564 #7	ENSGT00940000154623	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37
Xenarthra	ANCESTRAL SPECIES	1716															ENSGT00940000158043 #20	ENSGT00940000155938 #22
Sloth	MODERN SPECIES	11272																ENSCHOG00000000800 #22
Armadillo	MODERN SPECIES	2947													ENSDNOG00000047300	ENSDNOG00000043823	TOX3 (ENSDNOG00000007208) #20	SALL1 (ENSDNOG00000016413) #22
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00940000158564 #7	ENSGT00940000154623	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37	ENSGT00940000162968
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00940000158564 #7	ENSGT00940000154623.n	ENSGT00940000158960	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837.f #36	ENSGT00530000063553.b.b #37	ENSGT00940000162968
Elephant	MODERN SPECIES	393	ENSLAFG00000027219 #7	ENSLAFG00000030800 #7	SLC6A2 (ENSLAFG00000021409)	LPCAT2 (ENSLAFG00000003965) #8	CAPNS2 (ENSLAFG00000028051)	MMP2 (ENSLAFG00000003966) #9	IRX6 (ENSLAFG00000031625) #10	IRX5 (ENSLAFG00000000090) #11	IRX3 (ENSLAFG00000010498) #13	FTO (ENSLAFG00000015645) #14	RPGRIP1L (ENSLAFG00000015632) #15	AKTIP (ENSLAFG00000009027) #16	RBL2 (ENSLAFG00000009024) #17	CHD9 (ENSLAFG00000015374) #19	TOX3 (ENSLAFG00000014949) #20	SALL1 (ENSLAFG00000015251) #22	CYLD (ENSLAFG00000014171) #23	NOD2 (ENSLAFG00000014161) #24	SNX20 (ENSLAFG00000015658) #25	NKD1 (ENSLAFG00000004213) #26	BRD7 (ENSLAFG00000017854) #28	ADCY7 (ENSLAFG00000009995) #29	ENSLAFG00000009990 #30	ENSLAFG00000029580	WTIP (ENSLAFG00000022542)	ENSLAFG00000013784	PDCD2L (ENSLAFG00000013778)	GPI (ENSLAFG00000013770)	GARRE1 (ENSLAFG00000013224)	ENSLAFG00000027355	LSM14A (ENSLAFG00000005233)
Hyrax	MODERN SPECIES	489																SALL1 (ENSPCAG00000008162) #22
Tenrec	MODERN SPECIES	671																SALL1 (ENSETEG00000015150) #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000154623.o.b	ENSGT00940000154623.o.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000154623.o.a.b	ENSGT00940000154623.o.a.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00390000014556 #33	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000154623.o.a.b	ENSGT00940000154623.o.a.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000154623.o.a.b	ENSGT00940000154623.o.a.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00940000160934 #24	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000153430.a.a.e	ENSGT00940000159811 #34	ENSGT00940000158682 #35
Common wonbat	MODERN SPECIES	1030	ENSVURG00010019780	SLC6A2 (ENSVURG00010019792)	LPCAT2 (ENSVURG00010019819) #8	MMP2 (ENSVURG00010019856) #9	IRX6 (ENSVURG00010019873) #10	IRX5 (ENSVURG00010019880) #11	IRX3 (ENSVURG00010019907) #13	FTO (ENSVURG00010019930) #14	RPGRIP1L (ENSVURG00010019968) #15	ENSVURG00010020006	AKTIP (ENSVURG00010020011) #16	RBL2 (ENSVURG00010020023) #17	CHD9 (ENSVURG00010020044) #19	TOX3 (ENSVURG00010020069) #20	ENSVURG00010020073	SALL1 (ENSVURG00010020083) #22	CYLD (ENSVURG00010020092) #23	NOD2 (ENSVURG00010020098) #24	SNX20 (ENSVURG00010020106) #25	NKD1 (ENSVURG00010020108) #26	ENSVURG00010020128 #28	ADCY7 (ENSVURG00010020149) #29	TENT4B (ENSVURG00010020181) #30	HEATR3 (ENSVURG00010020193) #31	CNEP1R1 (ENSVURG00010020204)	ENSVURG00010020211	ZNF423 (ENSVURG00010020223) #32
koala	MODERN SPECIES	19	ENSPCIG00000033949	ENSPCIG00000016283	SLC6A2 (ENSPCIG00000003091)	ENSPCIG00000033526	LPCAT2 (ENSPCIG00000003075) #8	MMP2 (ENSPCIG00000003051) #9	IRX6 (ENSPCIG00000022974) #10	IRX5 (ENSPCIG00000013874) #11	FTO (ENSPCIG00000024376) #14	RPGRIP1L (ENSPCIG00000024349) #15	ENSPCIG00000024347	AKTIP (ENSPCIG00000024346) #16	RBL2 (ENSPCIG00000024344) #17	CHD9 (ENSPCIG00000017215) #19	TOX3 (ENSPCIG00000027529) #20	SALL1 (ENSPCIG00000017840) #22	ENSPCIG00000032216	CYLD (ENSPCIG00000017853) #23	NOD2 (ENSPCIG00000017861) #24	SNX20 (ENSPCIG00000017863) #25	NKD1 (ENSPCIG00000017864) #26	BRD7 (ENSPCIG00000017871) #28	ADCY7 (ENSPCIG00000016804) #29	TENT4B (ENSPCIG00000018132) #30	HEATR3 (ENSPCIG00000012841) #31	CNEP1R1 (ENSPCIG00000003801)	ENSPCIG00000002963	ZNF423 (ENSPCIG00000021085) #32	ENSPCIG00000021089	ENSPCIG00000033644	CBLN1 (ENSPCIG00000031036) #34
Wallaby	MODERN SPECIES	10653																SALL1 (ENSMEUG00000012206) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000005170	SLC6A2 (ENSSHAG00000002816)	CAPNS2 (ENSSHAG00000028677)	LPCAT2 (ENSSHAG00000012383) #8	MMP2 (ENSSHAG00000012197) #9	IRX6 (ENSSHAG00000011163) #10	IRX5 (ENSSHAG00000006589) #11	ENSSHAG00000027911	IRX3 (ENSSHAG00000012619) #13	FTO (ENSSHAG00000009174) #14	RPGRIP1L (ENSSHAG00000008212) #15	AKTIP (ENSSHAG00000024810) #16	RBL2 (ENSSHAG00000006471) #17	CHD9 (ENSSHAG00000002719) #19	TOX3 (ENSSHAG00000022477) #20	SALL1 (ENSSHAG00000009477) #22	CYLD (ENSSHAG00000003079) #23	NOD2 (ENSSHAG00000029900) #24	SNX20 (ENSSHAG00000018921) #25	NKD1 (ENSSHAG00000028041) #26	BRD7 (ENSSHAG00000018810) #28	ADCY7 (ENSSHAG00000018774) #29	TENT4B (ENSSHAG00000018746) #30	HEATR3 (ENSSHAG00000014261) #31	CNEP1R1 (ENSSHAG00000018694)	ENSSHAG00000018669	ZNF423 (ENSSHAG00000018342) #32	ENSSHAG00000018055 #33	CBLN1 (ENSSHAG00000026579) #34	N4BP1 (ENSSHAG00000016460) #35	ENSSHAG00000020968
Opossum	MODERN SPECIES		IRX5 (ENSMODG00000013202) #11	ENSMODG00000013200	ENSMODG00000047345	IRX3 (ENSMODG00000013192) #13	FTO (ENSMODG00000009684) #14	RPGRIP1L (ENSMODG00000013180) #15	AKTIP (ENSMODG00000025788) #16	RBL2 (ENSMODG00000013167) #17	ENSMODG00000028845	CHD9 (ENSMODG00000013142) #19	ENSMODG00000023478	TOX3 (ENSMODG00000043801) #20	ENSMODG00000048280 #18	ENSMODG00000046352	ENSMODG00000043097	SALL1 (ENSMODG00000013114) #22	CYLD (ENSMODG00000013111) #23	NOD2 (ENSMODG00000013087) #24	SNX20 (ENSMODG00000013071) #25	NKD1 (ENSMODG00000013068) #26	ENSMODG00000013057 #28	ADCY7 (ENSMODG00000013047) #29	TENT4B (ENSMODG00000013026) #30	HEATR3 (ENSMODG00000013019) #31	CNEP1R1 (ENSMODG00000048858)	ENSMODG00000028787	ZNF423 (ENSMODG00000012988) #32	ENSMODG00000044145	CBLN1 (ENSMODG00000012983) #34	ENSMODG00000037529	ENSMODG00000012970 #35
Platypus	MODERN SPECIES	2	ENSOANG00000050825	ENSOANG00000011089	SLC6A2 (ENSOANG00000011092)	LPCAT2 (ENSOANG00000011096) #8	MMP2 (ENSOANG00000011098) #9	ENSOANG00000029378 #10	IRX5 (ENSOANG00000044475) #11	ENSOANG00000045495	ENSOANG00000050066 #14	ENSOANG00000013407 #14	RPGRIP1L (ENSOANG00000013406) #15	AKTIP (ENSOANG00000013405) #16	RBL2 (ENSOANG00000013404) #17	CHD9 (ENSOANG00000013401) #19	TOX3 (ENSOANG00000013400) #20	SALL1 (ENSOANG00000048866) #22	CYLD (ENSOANG00000013398) #23	NOD2 (ENSOANG00000013397) #24	SNX20 (ENSOANG00000045105) #25	NKD1 (ENSOANG00000013395) #26	BRD7 (ENSOANG00000001329) #28	ADCY7 (ENSOANG00000050127) #29	TENT4B (ENSOANG00000000589) #30	HEATR3 (ENSOANG00000000588) #31	CNEP1R1 (ENSOANG00000000587)	ENSOANG00000000586	ZNF423 (ENSOANG00000000584) #32	ENSOANG00000030661 #33	CBLN1 (ENSOANG00000047584) #34	ST14 (ENSOANG00000000581)	N4BP1 (ENSOANG00000000582) #35
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000157672	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Lepidosauria	ANCESTRAL SPECIES	49		ENSGT00950000182841.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00940000163703.b	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000160204	ENSGT00940000158070	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Laterata	ANCESTRAL SPECIES	28	ENSGT00940000160204	ENSGT00940000158070	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Common wall lizard	MODERN SPECIES	16	CBLN1 (ENSPMRG00000019262) #34	ENSPMRG00000019258	ZNF423 (ENSPMRG00000019246) #32	ENSPMRG00000019239	HEATR3 (ENSPMRG00000019219) #31	TENT4B (ENSPMRG00000019207) #30	ADCY7 (ENSPMRG00000019178) #29	BRD7 (ENSPMRG00000018967) #28	ENSPMRG00000018916	NKD1 (ENSPMRG00000018905) #26	SNX20 (ENSPMRG00000018900) #25	AKTIP (ENSPMRG00000018887) #16	RBL2 (ENSPMRG00000018868) #17	CHD9 (ENSPMRG00000011919) #19	TOX3 (ENSPMRG00000011591) #20	SALL1 (ENSPMRG00000011586) #22	CYLD (ENSPMRG00000011569) #23	ENSPMRG00000011564	WFDC1 (ENSPMRG00000011562)	KCNG4 (ENSPMRG00000011560)	HSBP1 (ENSPMRG00000011555)	MLYCD (ENSPMRG00000011551)	ENSPMRG00000011543	CDH13 (ENSPMRG00000011514)	MPHOSPH6 (ENSPMRG00000011504)	ENSPMRG00000011499	ENSPMRG00000011493	HSD17B2 (ENSPMRG00000011487)	SDR42E1 (ENSPMRG00000011483)	ENSPMRG00000011479 ##27	SLC6A2 (ENSPMRG00000011472)
Argentine black and white tegu	MODERN SPECIES	51	SDR42E1 (ENSSMRG00000006244)	SLC6A2 (ENSSMRG00000006212)	CAPNS2 (ENSSMRG00000006204)	LPCAT2 (ENSSMRG00000006198) #8	MMP2 (ENSSMRG00000006186) #9	ENSSMRG00000006173	IRX6 (ENSSMRG00000006144) #10	IRX5 (ENSSMRG00000006134) #11	IRX3 (ENSSMRG00000006062) #13	FTO (ENSSMRG00000006034) #14	RPGRIP1L (ENSSMRG00000005963) #15	AKTIP (ENSSMRG00000005962) #16	RBL2 (ENSSMRG00000005954) #17	CHD9 (ENSSMRG00000005943) #19	TOX3 (ENSSMRG00000005925) #20	SALL1 (ENSSMRG00000005776) #22	CYLD (ENSSMRG00000005740) #23	SNX20 (ENSSMRG00000005732) #25	NKD1 (ENSSMRG00000005727) #26	BRD7 (ENSSMRG00000005252) #28	ADCY7 (ENSSMRG00000005205) #29	TENT4B (ENSSMRG00000005198) #30	HEATR3 (ENSSMRG00000005192) #31	CNEP1R1 (ENSSMRG00000005189)	ENSSMRG00000005169	ZNF423 (ENSSMRG00000005142) #32	ENSSMRG00000005139	CBLN1 (ENSSMRG00000005135) #34	N4BP1 (ENSSMRG00000005116) #35	SIAH1 (ENSSMRG00000005113) #36	LONP2 (ENSSMRG00000005107) #37
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00390000012054.b.ab	ENSGT00940000160204	ENSGT00940000158070	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Elapidae	ANCESTRAL SPECIES	17	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00940000155478	ENSGT00940000156844.a	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00960000189988	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00530000063553.b.b.z.a #37	ENSGT00940000154837 #36
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000158960	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00940000155478	ENSGT00940000156844.a	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00960000189988	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b.z.b #37
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00940000160204	ENSGT00940000158070	ENSGT00940000158960	ENSGT00940000155478	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00960000189988	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00950000186190	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b.z.b #37
Eastern brown snake	MODERN SPECIES	65	HSD17B2 (ENSPTXG00000009778)	SDR42E1 (ENSPTXG00000009777)	SLC6A2 (ENSPTXG00000009562)	ENSPTXG00000009559	LPCAT2 (ENSPTXG00000009556) #8	MMP2 (ENSPTXG00000009548) #9	ENSPTXG00000009547 #10	IRX5 (ENSPTXG00000009546) #11	FTO (ENSPTXG00000009544) #14	RPGRIP1L (ENSPTXG00000009543) #15	AKTIP (ENSPTXG00000009542) #16	RBL2 (ENSPTXG00000009245) #17	CHD9 (ENSPTXG00000009241) #19	ENSPTXG00000009240	TOX3 (ENSPTXG00000009239) #20	SALL1 (ENSPTXG00000009238) #22	ENSPTXG00000009237	CYLD (ENSPTXG00000009236) #23	SNX20 (ENSPTXG00000009222) #25	NKD1 (ENSPTXG00000009220) #26	BRD7 (ENSPTXG00000009078) #28	ADCY7 (ENSPTXG00000009074) #29	TENT4B (ENSPTXG00000009072) #30	HEATR3 (ENSPTXG00000009063) #31	CNEP1R1 (ENSPTXG00000009061)	ENSPTXG00000009059	ZNF423 (ENSPTXG00000009058) #32	ENSPTXG00000009057	ENSPTXG00000009056 #34	N4BP1 (ENSPTXG00000009055) #35	SIAH1 (ENSPTXG00000009054) #36
Mainland tiger snake	MODERN SPECIES	677																SALL1 (ENSNSUG00000016263) #22
Blue-lipped sea krait	MODERN SPECIES	4214																SALL1 (ENSLLTG00000000379) #22
Indian cobra	MODERN SPECIES	12	ENSNNAG00000018505	HSD17B2 (ENSNNAG00000018483)	SDR42E1 (ENSNNAG00000018469)	SLC6A2 (ENSNNAG00000018463)	ENSNNAG00000018460	LPCAT2 (ENSNNAG00000018456) #8	MMP2 (ENSNNAG00000018451) #9	IRX5 (ENSNNAG00000018448) #11	IRX3 (ENSNNAG00000018445) #13	FTO (ENSNNAG00000018444) #14	ENSNNAG00000018440 #15	AKTIP (ENSNNAG00000018435) #16	RBL2 (ENSNNAG00000018431) #17	CHD9 (ENSNNAG00000014441) #19	ENSNNAG00000013764	SALL1 (ENSNNAG00000013749) #22	CYLD (ENSNNAG00000013712) #23	SNX20 (ENSNNAG00000013703) #25	NKD1 (ENSNNAG00000013679) #26	BRD7 (ENSNNAG00000013586) #28	ADCY7 (ENSNNAG00000013071) #29	TENT4B (ENSNNAG00000012985) #30	HEATR3 (ENSNNAG00000012932) #31	CNEP1R1 (ENSNNAG00000012910)	ENSNNAG00000012817	ENSNNAG00000012795 #32	ENSNNAG00000012776 #32	CBLN1 (ENSNNAG00000012761) #34	N4BP1 (ENSNNAG00000012736) #35	ENSNNAG00000012720 #37	SIAH1 (ENSNNAG00000012705) #36
Lizard	MODERN SPECIES	841													ENSACAG00000043219	TOX3 (ENSACAG00000012303) #20	ENSACAG00000035877	SALL1 (ENSACAG00000014399) #22	CYLD (ENSACAG00000014388) #23	SNX20 (ENSACAG00000045503) #25	NKD1 (ENSACAG00000014357) #26	ENSACAG00000044873	BRD7 (ENSACAG00000014280) #28	ADCY7 (ENSACAG00000014022) #29	TENT4B (ENSACAG00000013952) #30	HEATR3 (ENSACAG00000013838) #31	ENSACAG00000040554	ENSACAG00000042432	ENSACAG00000013833	ENSACAG00000035677	ENSACAG00000045057	ZNF423 (ENSACAG00000013803) #32
tuatara	MODERN SPECIES	242																SALL1 (ENSSPUG00000000156) #22	CYLD (ENSSPUG00000000184) #23	SNX20 (ENSSPUG00000000234) #25
Archelosauria	ANCESTRAL SPECIES	16	ENSGT01030000235305	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000157672	ENSGT00950000182841.a.y	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492 #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT01000000220330	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
Emydidae	ANCESTRAL SPECIES	33	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT01000000220330	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #32	ENSGT00940000163703.b	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37
painted turtle	MODERN SPECIES	4	SLC6A2 (ENSCPBG00000012155)	LPCAT2 (ENSCPBG00000012158) #8	CAPNS2 (ENSCPBG00000012162)	ENSCPBG00000012164	MMP2 (ENSCPBG00000012165) #9	IRX6 (ENSCPBG00000012167) #10	IRX5 (ENSCPBG00000012173) #11	ENSCPBG00000012177	IRX3 (ENSCPBG00000012189) #13	FTO (ENSCPBG00000012192) #14	RPGRIP1L (ENSCPBG00000012201) #15	AKTIP (ENSCPBG00000012207) #16	RBL2 (ENSCPBG00000012231) #17	CHD9 (ENSCPBG00000012459) #19	TOX3 (ENSCPBG00000015917) #20	SALL1 (ENSCPBG00000015924) #22	CYLD (ENSCPBG00000015931) #23	SNX20 (ENSCPBG00000015934) #25	NKD1 (ENSCPBG00000015936) #26	BRD7 (ENSCPBG00000015938) #28	ADCY7 (ENSCPBG00000015953) #29	TENT4B (ENSCPBG00000015960) #30	HEATR3 (ENSCPBG00000015964) #31	CNEP1R1 (ENSCPBG00000015966)	ENSCPBG00000015969	ZNF423 (ENSCPBG00000015985) #32	ENSCPBG00000015998	CBLN1 (ENSCPBG00000016000) #34	N4BP1 (ENSCPBG00000016004) #35	SIAH1 (ENSCPBG00000016014) #36	LONP2 (ENSCPBG00000016016) #37
Three-toed box turtle	MODERN SPECIES	60	ENSTMTG00000002486	SLC6A2 (ENSTMTG00000002534)	LPCAT2 (ENSTMTG00000002617) #8	CAPNS2 (ENSTMTG00000002630)	MMP2 (ENSTMTG00000002636) #9	ENSTMTG00000002642 #10	IRX5 (ENSTMTG00000002648) #11	IRX3 (ENSTMTG00000002652) #13	FTO (ENSTMTG00000002656) #14	RPGRIP1L (ENSTMTG00000002670) #15	AKTIP (ENSTMTG00000014379) #16	RBL2 (ENSTMTG00000014398) #17	CHD9 (ENSTMTG00000015377) #19	ENSTMTG00000022436	TOX3 (ENSTMTG00000022443) #20	SALL1 (ENSTMTG00000022452) #22	CYLD (ENSTMTG00000022457) #23	SNX20 (ENSTMTG00000022462) #25	NKD1 (ENSTMTG00000022468) #26	BRD7 (ENSTMTG00000022489) #28	ADCY7 (ENSTMTG00000022528) #29	TENT4B (ENSTMTG00000022548) #30	HEATR3 (ENSTMTG00000022550) #31	CNEP1R1 (ENSTMTG00000022551)	ENSTMTG00000022552	ZNF423 (ENSTMTG00000022555) #32	ENSTMTG00000022559	CBLN1 (ENSTMTG00000022561) #34	N4BP1 (ENSTMTG00000022563) #35	SIAH1 (ENSTMTG00000022565) #36	LONP2 (ENSTMTG00000022570) #37
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT01000000220330	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00940000159578
Goode s thornscrub tortoise	MODERN SPECIES	3	SLC6A2 (ENSGEVG00005012091)	LPCAT2 (ENSGEVG00005012528) #8	CAPNS2 (ENSGEVG00005012569)	MMP2 (ENSGEVG00005012646) #9	ENSGEVG00005012896 #10	IRX5 (ENSGEVG00005012952) #11	IRX3 (ENSGEVG00005012997) #13	FTO (ENSGEVG00005013146) #14	RPGRIP1L (ENSGEVG00005013217) #15	AKTIP (ENSGEVG00005013365) #16	RBL2 (ENSGEVG00005013409) #17	CHD9 (ENSGEVG00005013539) #19	ENSGEVG00005013688	TOX3 (ENSGEVG00005013709) #20	ENSGEVG00005013844	SALL1 (ENSGEVG00005013862) #22	CYLD (ENSGEVG00005013915) #23	SNX20 (ENSGEVG00005013947) #25	NKD1 (ENSGEVG00005013964) #26	BRD7 (ENSGEVG00005014130) #28	ADCY7 (ENSGEVG00005014804) #29	TENT4B (ENSGEVG00005014891) #30	HEATR3 (ENSGEVG00005014998) #31	CNEP1R1 (ENSGEVG00005015041)	ENSGEVG00005015090	ZNF423 (ENSGEVG00005015167) #32	CBLN1 (ENSGEVG00005015229) #34	N4BP1 (ENSGEVG00005015279) #35	SIAH1 (ENSGEVG00005015318) #36	LONP2 (ENSGEVG00005015339) #37	ABCC12 (ENSGEVG00005015407)
Abingdon island giant tortoise	MODERN SPECIES	2822															ENSCABG00000015089	SALL1 (ENSCABG00000015091) #22	CYLD (ENSCABG00000015097) #23	SNX20 (ENSCABG00000015113) #25
Chinese turtle	MODERN SPECIES	940	ENSPSIG00000001625	SLC6A2 (ENSPSIG00000016841)	LPCAT2 (ENSPSIG00000017713) #8	MMP2 (ENSPSIG00000017859) #9	IRX6 (ENSPSIG00000006856) #10	IRX5 (ENSPSIG00000006956) #11	IRX3 (ENSPSIG00000006981) #13	ENSPSIG00000001627	FTO (ENSPSIG00000007424) #14	RPGRIP1L (ENSPSIG00000007549) #15	AKTIP (ENSPSIG00000007566) #16	RBL2 (ENSPSIG00000007573) #17	CHD9 (ENSPSIG00000008099) #19	TOX3 (ENSPSIG00000008201) #20	ENSPSIG00000001632	SALL1 (ENSPSIG00000008582) #22	CYLD (ENSPSIG00000008623) #23	SNX20 (ENSPSIG00000009076) #25	NKD1 (ENSPSIG00000009112) #26	BRD7 (ENSPSIG00000010123) #28	ENSPSIG00000010651 #29	ENSPSIG00000010658 #29	TENT4B (ENSPSIG00000010667) #30	HEATR3 (ENSPSIG00000010737) #31	CNEP1R1 (ENSPSIG00000011071)	ENSPSIG00000011077	ZNF423 (ENSPSIG00000011110) #32	ENSPSIG00000011186	ENSPSIG00000011190	CBLN1 (ENSPSIG00000011197) #34	N4BP1 (ENSPSIG00000011341) #35
Archosauria	ANCESTRAL SPECIES	14	ENSGT00950000182841.a	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00940000159578	ENSGT00950000183118.B
Aves	ANCESTRAL SPECIES	22	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000155478	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00940000159578	ENSGT00950000183118.B
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000155478	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000155478	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B.f #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00960000190127	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B.f #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00960000190127	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811.c #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	19	ENSSHBG00005004983	ENSSHBG00005004922	ENSSHBG00005004890	SLC6A2 (ENSSHBG00005004882)	LPCAT2 (ENSSHBG00005004875) #8	ENSSHBG00005004868 #9	ENSSHBG00005004859 #10	ENSSHBG00005004850 #11	ENSSHBG00005004846 #13	FTO (ENSSHBG00005004822) #14	RPGRIP1L (ENSSHBG00005004805) #15	ENSSHBG00005004785 #16	ENSSHBG00005004768 #17	ENSSHBG00005002921 #19	ENSSHBG00005002199 #20	ENSSHBG00005002192 #22	CYLD (ENSSHBG00005002168) #23	ENSSHBG00005002150 #25	ENSSHBG00005002133 #26	ENSSHBG00005002050	BRD7 (ENSSHBG00005002033) #28	ADCY7 (ENSSHBG00005001991) #29	ENSSHBG00005001960 #30	ENSSHBG00005001903 #31	CNEP1R1 (ENSSHBG00005001851)	ENSSHBG00005001748 #32	ENSSHBG00005001669 #34	ENSSHBG00005001653 #35	ENSSHBG00005001629 #36	LONP2 (ENSSHBG00005001588) #37	ENSSHBG00005001570
Kakapo	MODERN SPECIES	4	ENSSHBG00005001082	ENSSHBG00005001084	ENSSHBG00005001085	ENSSHBG00005001087	ENSSHBG00005001088	ENSSHBG00005001089	ENSSHBG00005001090	ENSSHBG00005001092	ENSSHBG00005001094	ENSSHBG00005001095	ENSSHBG00005001096	ENSSHBG00005009606 #17	ENSSHBG00005009625 #17	ENSSHBG00005009703 #19	ENSSHBG00005009914 #20	ENSSHBG00005009925 #22	ENSSHBG00005009934 #25	ENSSHBG00005009952 #26	ENSSHBG00005010003	ENSSHBG00005010115	ENSSHBG00005010154	ENSSHBG00005010247	ENSSHBG00005010325	ENSSHBG00005010393	ENSSHBG00005010713	CFDP1 (ENSSHBG00005010819)	ENSSHBG00005010841	ENSSHBG00005010876	ENSSHBG00005010945	ENSSHBG00005011005	ENSSHBG00005011077
Golden eagle	MODERN SPECIES	25	ENSACCG00020000798	ENSACCG00020000779	SLC12A4 (ENSACCG00020000700)	SLC6A2 (ENSACCG00020000586)	LPCAT2 (ENSACCG00020000417) #8	MMP2 (ENSACCG00020000389) #9	ENSACCG00020003392 #10	IRX5 (ENSACCG00020003380) #11	IRX3 (ENSACCG00020003366) #13	FTO (ENSACCG00020003336) #14	RPGRIP1L (ENSACCG00020003265) #15	AKTIP (ENSACCG00020003199) #16	RBL2 (ENSACCG00020003164) #17	CHD9 (ENSACCG00020003121) #19	TOX3 (ENSACCG00020003095) #20	SALL1 (ENSACCG00020003074) #22	CYLD (ENSACCG00020003038) #23	SNX20 (ENSACCG00020003015) #25	NKD1 (ENSACCG00020002998) #26	BRD7 (ENSACCG00020002949) #28	ADCY7 (ENSACCG00020002875) #29	TENT4B (ENSACCG00020002781) #30	HEATR3 (ENSACCG00020002623) #31	CNEP1R1 (ENSACCG00020002590)	ZNF423 (ENSACCG00020002554) #32	CBLN1 (ENSACCG00020002538) #34	N4BP1 (ENSACCG00020002525) #35	SIAH1 (ENSACCG00020002509) #36	LONP2 (ENSACCG00020002482) #37	PHKB (ENSACCG00020002367)	ITFG1 (ENSACCG00020002263)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000155478	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B.e #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00960000190127	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B
Great tit	MODERN SPECIES	2	ENSPMJG00000001595	DPEP2 (ENSPMJG00000001604)	SLC12A4 (ENSPMJG00000001616)	SLC6A2 (ENSPMJG00000001646)	LPCAT2 (ENSPMJG00000001668) #8	ENSPMJG00000001678	MMP2 (ENSPMJG00000001696) #9	IRX6 (ENSPMJG00000001698) #10	IRX5 (ENSPMJG00000001724) #11	FTO (ENSPMJG00000001806) #14	ENSPMJG00000001857 #15	AKTIP (ENSPMJG00000001877) #16	RBL2 (ENSPMJG00000001882) #17	CHD9 (ENSPMJG00000001906) #19	TOX3 (ENSPMJG00000002068) #20	SALL1 (ENSPMJG00000002204) #22	CYLD (ENSPMJG00000002241) #23	SNX20 (ENSPMJG00000002269) #25	NKD1 (ENSPMJG00000002321) #26	ENSPMJG00000002341	BRD7 (ENSPMJG00000002349) #28	ADCY7 (ENSPMJG00000002418) #29	TENT4B (ENSPMJG00000002519) #30	HEATR3 (ENSPMJG00000002534) #31	CNEP1R1 (ENSPMJG00000002544)	ZNF423 (ENSPMJG00000002597) #32	CBLN1 (ENSPMJG00000002660) #34	N4BP1 (ENSPMJG00000002728) #35	SIAH1 (ENSPMJG00000002759) #36	LONP2 (ENSPMJG00000002764) #37	PHKB (ENSPMJG00000002784)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT01040000241257	ENSGT00940000155706 #19	ENSGT00940000158043.a #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00960000190127	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043.a #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00960000190127	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B
Medium ground finch	MODERN SPECIES	118											ENSGFOG00000014818	AKTIP (ENSGFOG00000014817) #16	RBL2 (ENSGFOG00000014816) #17	CHD9 (ENSGFOG00000014815) #19	TOX3 (ENSGFOG00000014814) #20	SALL1 (ENSGFOG00000014812) #22	CYLD (ENSGFOG00000014811) #23	SNX20 (ENSGFOG00000014810) #25	NKD1 (ENSGFOG00000014809) #26	ENSGFOG00000014808	BRD7 (ENSGFOG00000014801) #28	ADCY7 (ENSGFOG00000014793) #29	TENT4B (ENSGFOG00000014790) #30	HEATR3 (ENSGFOG00000014785) #31	CNEP1R1 (ENSGFOG00000014782)	ZNF423 (ENSGFOG00000014781) #32	N4BP1 (ENSGFOG00000014780) #35	SIAH1 (ENSGFOG00000014779) #36	LONP2 (ENSGFOG00000014777) #37
Passeroidea	ANCESTRAL SPECIES	17	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT00940000166682	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483.d.a #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043.a #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000008576	ENSGT00390000012529 #31	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Zebra finch	MODERN SPECIES	2	ENSTGUG00000007047	ENSTGUG00000027159	SLC12A4 (ENSTGUG00000007074)	SLC6A2 (ENSTGUG00000007218)	LPCAT2 (ENSTGUG00000007314) #8	MMP2 (ENSTGUG00000007337) #9	IRX6 (ENSTGUG00000020135) #10	IRX5 (ENSTGUG00000026210) #11	IRX3 (ENSTGUG00000028899) #13	FTO (ENSTGUG00000007401) #14	ENSTGUG00000027769	AKTIP (ENSTGUG00000007406) #16	RBL2 (ENSTGUG00000007426) #17	CHD9 (ENSTGUG00000007476) #19	ENSTGUG00000007508 #20	SALL1 (ENSTGUG00000007514) #22	ENSTGUG00000022644
Common canary	MODERN SPECIES	14	DUS2 (ENSSCAG00000004988)	DDX28 (ENSSCAG00000004982)	ENSSCAG00000004975	ENSSCAG00000004963	SLC12A4 (ENSSCAG00000004932)	SLC6A2 (ENSSCAG00000004914)	CAPNS2 (ENSSCAG00000004910)	LPCAT2 (ENSSCAG00000004906) #8	MMP2 (ENSSCAG00000004897) #9	ENSSCAG00000004891 #10	FTO (ENSSCAG00000004856) #14	AKTIP (ENSSCAG00000004831) #16	RBL2 (ENSSCAG00000004824) #17	CHD9 (ENSSCAG00000004806) #19	TOX3 (ENSSCAG00000004793) #20	SALL1 (ENSSCAG00000004776) #22	CYLD (ENSSCAG00000004758) #23	SNX20 (ENSSCAG00000004752) #25	NKD1 (ENSSCAG00000004748) #26	BRD7 (ENSSCAG00000004669) #28	ADCY7 (ENSSCAG00000004597) #29	TENT4B (ENSSCAG00000004547) #30	HEATR3 (ENSSCAG00000004471) #31	ENSSCAG00000004461	ZNF423 (ENSSCAG00000004455) #32	N4BP1 (ENSSCAG00000004443) #35	SIAH1 (ENSSCAG00000004438) #36	LONP2 (ENSSCAG00000004317) #37	PHKB (ENSSCAG00000004271)	ITFG1 (ENSSCAG00000004260)	NETO2 (ENSSCAG00000004251)
Flycatcher	MODERN SPECIES	2	ENSFALG00000007757	ENSFALG00000026060	DUS2 (ENSFALG00000007759)	ENSFALG00000014595	ENSFALG00000007762	DPEP2 (ENSFALG00000007766)	SLC12A4 (ENSFALG00000007770)	SLC6A2 (ENSFALG00000007795)	ENSFALG00000028070	LPCAT2 (ENSFALG00000007864) #8	MMP2 (ENSFALG00000007900) #9	ENSFALG00000026677 #10	ENSFALG00000028077 #11	FTO (ENSFALG00000007914) #14	TOX3 (ENSFALG00000000072) #20	SALL1 (ENSFALG00000000074) #22	CYLD (ENSFALG00000000075) #23	SNX20 (ENSFALG00000000077) #25	NKD1 (ENSFALG00000000078) #26	ENSFALG00000027589	BRD7 (ENSFALG00000000080) #28	ADCY7 (ENSFALG00000000086) #29	TENT4B (ENSFALG00000000087) #30	HEATR3 (ENSFALG00000000089) #31	CNEP1R1 (ENSFALG00000025598)	ZNF423 (ENSFALG00000000097) #32	CBLN1 (ENSFALG00000000098) #34	ENSFALG00000026934	N4BP1 (ENSFALG00000000101) #35	SIAH1 (ENSFALG00000000104) #36	LONP2 (ENSFALG00000000103) #37
Galloanserae	ANCESTRAL SPECIES	12	ENSGT01030000235333	ENSGT00940000157672	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Anatidae	ANCESTRAL SPECIES	17	ENSGT01030000235333	ENSGT00940000157672	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706 #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Duck	MODERN SPECIES	3	ENSAPLG00000004353	DPEP2 (ENSAPLG00000004307)	ENSAPLG00000022247	SLC12A4 (ENSAPLG00000004021)	ENSAPLG00000003879	LPCAT2 (ENSAPLG00000003809) #8	CAPNS2 (ENSAPLG00000023985)	MMP2 (ENSAPLG00000003788) #9	IRX3 (ENSAPLG00000019607) #13	FTO (ENSAPLG00000016324) #14	RPGRIP1L (ENSAPLG00000016340) #15	AKTIP (ENSAPLG00000016399) #16	RBL2 (ENSAPLG00000001177) #17	CHD9 (ENSAPLG00000002826) #19	TOX3 (ENSAPLG00000003299) #20	SALL1 (ENSAPLG00000003356) #22	CYLD (ENSAPLG00000012780) #23	SNX20 (ENSAPLG00000013062) #25	NKD1 (ENSAPLG00000013087) #26	ENSAPLG00000027872	BRD7 (ENSAPLG00000013363) #28	ADCY7 (ENSAPLG00000013887) #29	TENT4B (ENSAPLG00000014941) #30	CNEP1R1 (ENSAPLG00000025705)	ENSAPLG00000026611	HEATR3 (ENSAPLG00000009802) #31	ZNF423 (ENSAPLG00000009508) #32	ENSAPLG00000027161	ENSAPLG00000027305	ENSAPLG00000006819	ENSAPLG00000006820
Pink-footed goose	MODERN SPECIES	15	ENSABRG00000022667	ENSABRG00000022665	SLC12A4 (ENSABRG00000022298)	SLC6A2 (ENSABRG00000022187)	LPCAT2 (ENSABRG00000022184) #8	MMP2 (ENSABRG00000022132) #9	IRX6 (ENSABRG00000022116) #10	IRX5 (ENSABRG00000022092) #11	IRX3 (ENSABRG00000022069) #13	FTO (ENSABRG00000022047) #14	RPGRIP1L (ENSABRG00000022027) #15	AKTIP (ENSABRG00000021982) #16	RBL2 (ENSABRG00000021843) #17	CHD9 (ENSABRG00000020362) #19	TOX3 (ENSABRG00000020053) #20	SALL1 (ENSABRG00000020030) #22
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000166682	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706.x #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301 #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000161738	ENSGT00940000160211	ENSGT00940000157672	ENSGT00940000158960	ENSGT01030000234574.A.b.a #8	ENSGT00940000158511 #9	ENSGT00940000159909 #10	ENSGT00940000159483 #11	ENSGT00940000161299 #13	ENSGT00390000017730 #14	ENSGT00520000055620.B #15	ENSGT00390000010125 #16	ENSGT00950000183202.a.b #17	ENSGT00940000155706.x #19	ENSGT00940000158043 #20	ENSGT00940000155938 #22	ENSGT00390000018123.a.a #23	ENSGT00530000063759.a #25	ENSGT00440000033589.c #26	ENSGT00950000183170.a #28	ENSGT00940000159096 #29	ENSGT00940000158301.c #30	ENSGT00390000012529 #31	ENSGT00390000008576	ENSGT00940000158492 #32	ENSGT00940000159811 #34	ENSGT00940000158682 #35	ENSGT00940000154837 #36	ENSGT00530000063553.b.b #37	ENSGT00950000183118.B	ENSGT00390000013367
Chicken	MODERN SPECIES	2	DPEP2 (ENSGALG00010025325)	SLC12A4 (ENSGALG00010025353)	ENSGALG00010025372	SLC6A2 (ENSGALG00010025392)	LPCAT2 (ENSGALG00010025257) #8	MMP2 (ENSGALG00010025414) #9	IRX6 (ENSGALG00010025424) #10	IRX5 (ENSGALG00010025430) #11	IRX3 (ENSGALG00010025432) #13	FTO (ENSGALG00010021200) #14	RPGRIP1L (ENSGALG00010021298) #15	AKTIP (ENSGALG00010021747) #16	RBL2 (ENSGALG00010021778) #17	CHD9 (ENSGALG00010021789) #19	TOX3 (ENSGALG00010024523) #20	SALL1 (ENSGALG00010022707) #22	CYLD (ENSGALG00010022737) #23	SNX20 (ENSGALG00010022754) #25	NKD1 (ENSGALG00010024038) #26	BRD7 (ENSGALG00010024063) #28	ADCY7 (ENSGALG00010024074) #29	PAPD5 (ENSGALG00010024080) #30	HEATR3 (ENSGALG00010025910) #31	CNEP1R1 (ENSGALG00010024101)	ZNF423 (ENSGALG00010024152) #32	CBLN1 (ENSGALG00010024173) #34	N4BP1 (ENSGALG00010024178) #35	SIAH1 (ENSGALG00010024220) #36	LONP2 (ENSGALG00010024230) #37	PHKB (ENSGALG00010024263)	ITFG1 (ENSGALG00010024314)
Turkey	MODERN SPECIES	4	ENSMGAG00000005064 #35	ENSMGAG00000017995 #34	ENSMGAG00000021372 #32	ENSMGAG00000005058 #32	ENSMGAG00000022910	ENSMGAG00000018529	ENSMGAG00000005016 #31	ENSMGAG00000021282 #31	ENSMGAG00000022137 #30	ENSMGAG00000004957 #30	ENSMGAG00000004849 #29	ENSMGAG00000004779 #28	ENSMGAG00000004728 #26	ENSMGAG00000004775 #25	ENSMGAG00000004739 #23	ENSMGAG00000004704 #22	ENSMGAG00000004689 #20	ENSMGAG00000020696 #19	ENSMGAG00000004642 #19	ENSMGAG00000020565	ENSMGAG00000004512 #16	ENSMGAG00000004556 #17	RPGRIP1L (ENSMGAG00000004492) #15	ENSMGAG00000004464 #14	ENSMGAG00000017825 #9	ENSMGAG00000022119	ENSMGAG00000004311 #8	ENSMGAG00000018372	ENSMGAG00000004090	ENSMGAG00000021306	ENSMGAG00000004072
Japanese quail	MODERN SPECIES	2	DPEP2 (ENSCJPG00005012390)	SLC12A4 (ENSCJPG00005012391)	SLC6A2 (ENSCJPG00005012392)	LPCAT2 (ENSCJPG00005012393) #8	CAPNS2 (ENSCJPG00005012394)	MMP2 (ENSCJPG00005012395) #9	IRX6 (ENSCJPG00005012397) #10	IRX5 (ENSCJPG00005012400) #11	IRX3 (ENSCJPG00005012408) #13	FTO (ENSCJPG00005012412) #14	RPGRIP1L (ENSCJPG00005012413) #15	AKTIP (ENSCJPG00005012414) #16	RBL2 (ENSCJPG00005012415) #17	CHD9 (ENSCJPG00005012416) #19	TOX3 (ENSCJPG00005014332) #20	SALL1 (ENSCJPG00005014342) #22	CYLD (ENSCJPG00005014348) #23	SNX20 (ENSCJPG00005014349) #25	NKD1 (ENSCJPG00005014352) #26	BRD7 (ENSCJPG00005014353) #28	ADCY7 (ENSCJPG00005014354) #29	TENT4B (ENSCJPG00005014355) #30	HEATR3 (ENSCJPG00005014356) #31	CNEP1R1 (ENSCJPG00005014357)	ZNF423 (ENSCJPG00005014360) #32	CBLN1 (ENSCJPG00005014363) #34	N4BP1 (ENSCJPG00005014367) #35	SIAH1 (ENSCJPG00005014369) #36	LONP2 (ENSCJPG00005014370) #37	PHKB (ENSCJPG00005014372)	ITFG1 (ENSCJPG00005014373)
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	737	DUS2 (ENSSCUG00000011520)	ENSSCUG00000011522	DPEP2 (ENSSCUG00000011526)	SLC12A4 (ENSSCUG00000011529)	SLC6A2 (ENSSCUG00000011539)	LPCAT2 (ENSSCUG00000011558) #8	ENSSCUG00000011560	MMP2 (ENSSCUG00000011563) #9	FTO (ENSSCUG00000011569) #14	RPGRIP1L (ENSSCUG00000011575) #15	AKTIP (ENSSCUG00000011580) #16	RBL2 (ENSSCUG00000011595) #17	ENSSCUG00000011648 #19	ENSSCUG00000011651 #19	TOX3 (ENSSCUG00000011654) #20	ENSSCUG00000011661 #22	ENSSCUG00000011662 #22	ENSSCUG00000011664	CYLD (ENSSCUG00000011670) #23	SNX20 (ENSSCUG00000011673) #25	NKD1 (ENSSCUG00000011675) #26	BRD7 (ENSSCUG00000011678) #28	ADCY7 (ENSSCUG00000011683) #29	TENT4B (ENSSCUG00000011689) #30	HEATR3 (ENSSCUG00000011696) #31	CNEP1R1 (ENSSCUG00000011701)	ZNF423 (ENSSCUG00000011707) #32	N4BP1 (ENSSCUG00000011720) #35	SIAH1 (ENSSCUG00000011723) #36	LONP2 (ENSSCUG00000011726) #37	ABCC12 (ENSSCUG00000011735)
African ostrich	MODERN SPECIES	737	ENSSCUG00000011522	DPEP2 (ENSSCUG00000011526)	SLC12A4 (ENSSCUG00000011529)	SLC6A2 (ENSSCUG00000011539)	LPCAT2 (ENSSCUG00000011558) #8	ENSSCUG00000011560	MMP2 (ENSSCUG00000011563) #9	FTO (ENSSCUG00000011569) #14	RPGRIP1L (ENSSCUG00000011575) #15	AKTIP (ENSSCUG00000011580) #16	RBL2 (ENSSCUG00000011595) #17	ENSSCUG00000011648 #19	ENSSCUG00000011651 #19	TOX3 (ENSSCUG00000011654) #20	ENSSCUG00000011661 #22	ENSSCUG00000011662 #22	ENSSCUG00000011664	CYLD (ENSSCUG00000011670) #23	SNX20 (ENSSCUG00000011673) #25	NKD1 (ENSSCUG00000011675) #26	BRD7 (ENSSCUG00000011678) #28	ADCY7 (ENSSCUG00000011683) #29	TENT4B (ENSSCUG00000011689) #30	HEATR3 (ENSSCUG00000011696) #31	CNEP1R1 (ENSSCUG00000011701)	ZNF423 (ENSSCUG00000011707) #32	N4BP1 (ENSSCUG00000011720) #35	SIAH1 (ENSSCUG00000011723) #36	LONP2 (ENSSCUG00000011726) #37	ABCC12 (ENSSCUG00000011735)	PHKB (ENSSCUG00000011790)
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	35	ENSCPRG00005002923	SLC6A2 (ENSCPRG00005002972)	LPCAT2 (ENSCPRG00005003047) #8	MMP2 (ENSCPRG00005003118) #9	IRX6 (ENSCPRG00005003377) #10	ENSCPRG00005003389 #11	IRX3 (ENSCPRG00005003402) #13	FTO (ENSCPRG00005003411) #14	RPGRIP1L (ENSCPRG00005003426) #15	AKTIP (ENSCPRG00005003438) #16	RBL2 (ENSCPRG00005003449) #17	CHD9 (ENSCPRG00005003455) #19	ENSCPRG00005003475	TOX3 (ENSCPRG00005003482) #20	ENSCPRG00005003503 #22	ENSCPRG00005003506 #22	CYLD (ENSCPRG00005003515) #23	SNX20 (ENSCPRG00005003533) #25	NKD1 (ENSCPRG00005003548) #26	BRD7 (ENSCPRG00005003570) #28	ADCY7 (ENSCPRG00005003595) #29	TENT4B (ENSCPRG00005003615) #30	HEATR3 (ENSCPRG00005003660) #31	CNEP1R1 (ENSCPRG00005003802)	ZNF423 (ENSCPRG00005003814) #32	CBLN1 (ENSCPRG00005003876) #34	N4BP1 (ENSCPRG00005003890) #35	SIAH1 (ENSCPRG00005003908) #36	LONP2 (ENSCPRG00005003912) #37	ABCC12 (ENSCPRG00005003919)	PHKB (ENSCPRG00005003951)
Australian saltwater crocodile	MODERN SPECIES	35	SLC12A4 (ENSCPRG00005002899)	ENSCPRG00005002923	SLC6A2 (ENSCPRG00005002972)	LPCAT2 (ENSCPRG00005003047) #8	MMP2 (ENSCPRG00005003118) #9	IRX6 (ENSCPRG00005003377) #10	ENSCPRG00005003389 #11	IRX3 (ENSCPRG00005003402) #13	FTO (ENSCPRG00005003411) #14	RPGRIP1L (ENSCPRG00005003426) #15	AKTIP (ENSCPRG00005003438) #16	RBL2 (ENSCPRG00005003449) #17	CHD9 (ENSCPRG00005003455) #19	ENSCPRG00005003475	TOX3 (ENSCPRG00005003482) #20	ENSCPRG00005003503 #22	ENSCPRG00005003506 #22	CYLD (ENSCPRG00005003515) #23	SNX20 (ENSCPRG00005003533) #25	NKD1 (ENSCPRG00005003548) #26	BRD7 (ENSCPRG00005003570) #28	ADCY7 (ENSCPRG00005003595) #29	TENT4B (ENSCPRG00005003615) #30	HEATR3 (ENSCPRG00005003660) #31	CNEP1R1 (ENSCPRG00005003802)	ZNF423 (ENSCPRG00005003814) #32	CBLN1 (ENSCPRG00005003876) #34	N4BP1 (ENSCPRG00005003890) #35	SIAH1 (ENSCPRG00005003908) #36	LONP2 (ENSCPRG00005003912) #37	ABCC12 (ENSCPRG00005003919)