Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00390000002190.b	ENSGT01030000234515.a.a.a #7	ENSGT00940000158313 #8	ENSGT00940000163376 #9	ENSGT00940000154409 #10	ENSGT00950000182997.a.b.b.b #11	ENSGT00940000158200 #12	ENSGT00940000161878 #13	ENSGT00940000154786.e #15	ENSGT00940000162804 #16	ENSGT00940000155330 #17	ENSGT00950000183167.a.b.b.b #18	ENSGT00950000183072.b.a #19	ENSGT00940000157629.f #20	ENSGT00940000160106 #21	ENSGT00390000000685 #22	ENSGT00390000010077 #23	ENSGT00950000182882.A.a #24	ENSGT01030000234528.B.b.a.a.a #25	ENSGT00940000160845 #26	ENSGT00940000157422 #27	ENSGT00940000156263 #28	ENSGT00960000186993 #29	ENSGT00940000161971	ENSGT00500000044852.b #30	ENSGT00940000161446 #31	ENSGT00940000157032 #32	ENSGT00530000063734.b #33	ENSGT00950000183038.a.b.a #34	ENSGT00390000016511 #35	ENSGT00390000009755 #36
Equus	ANCESTRAL SPECIES	16	ENSGT01030000234515.a.a.a #7	ENSGT00940000158313 #8	ENSGT00940000163376 #9	ENSGT00940000154409 #10	ENSGT00950000182997.a.b.b.b #11	ENSGT00940000158200 #12	ENSGT00940000161878 #13	ENSGT00940000168617 #14	ENSGT00940000154786.e #15	ENSGT00940000162804 #16	ENSGT00940000155330 #17	ENSGT00950000183167.a.b.b.b #18	ENSGT00950000183072.b.a #19	ENSGT00940000157629.f #20	ENSGT00940000160106 #21	ENSGT00390000000685 #22	ENSGT00390000010077 #23	ENSGT00950000182882.A.a #24	ENSGT01030000234528.B.b.a.a.a #25	ENSGT00940000160845 #26	ENSGT00940000157422 #27	ENSGT00940000156263 #28	ENSGT00960000186993 #29	ENSGT00940000161971	ENSGT00500000044852.b #30	ENSGT00940000161446 #31	ENSGT00940000157032 #32	ENSGT00530000063734.b #33	ENSGT00950000183038.a.b.a #34	ENSGT00390000016511 #35	ENSGT00390000009755 #36
Donkey	MODERN SPECIES	14	CERS5 (ENSEASG00005004290) #7	LIMA1 (ENSEASG00005004304) #8	FAM186A (ENSEASG00005028951) #9	LARP4 (ENSEASG00005004356) #10	DIP2B (ENSEASG00005005081) #11	ATF1 (ENSEASG00005005929) #12	TMPRSS12 (ENSEASG00005005935) #13	ENSEASG00005005941 #14	ENSEASG00005005942 #15	HIGD1C (ENSEASG00005024715) #16	SLC11A2 (ENSEASG00005005951) #17	LETMD1 (ENSEASG00005005963) #18	CSRNP2 (ENSEASG00005005970) #19	TFCP2 (ENSEASG00005005976) #20	POU6F1 (ENSEASG00005005986) #21	DAZAP2 (ENSEASG00005023725) #22	ENSEASG00005030464 #23	BIN2 (ENSEASG00005006006) #24	CELA1 (ENSEASG00005006009) #25	GALNT6 (ENSEASG00005006013) #26	SLC4A8 (ENSEASG00005006225) #27	SCN8A (ENSEASG00005008696) #28	ENSEASG00005036724 #29	ENSEASG00005038500 #30	ACVRL1 (ENSEASG00005008753) #31	ACVR1B (ENSEASG00005008768) #32	TAMALIN (ENSEASG00005008779) #33	NR4A1 (ENSEASG00005008782) #34	ATG101 (ENSEASG00005036805) #35	SMIM41 (ENSEASG00005008797) #36	KRT80 (ENSEASG00005024921) #37
Horse	MODERN SPECIES	27	LIMA1 (ENSECAG00000011991) #8	FAM186A (ENSECAG00000028479) #9	LARP4 (ENSECAG00000012479) #10	DIP2B (ENSECAG00000017791) #11	ATF1 (ENSECAG00000016445) #12	ENSECAG00000048892	METTL7A (ENSECAG00000020202) #15	TMPRSS12 (ENSECAG00000009548) #13	ENSECAG00000027812 #14	HIGD1C (ENSECAG00000013371) #16	SLC11A2 (ENSECAG00000020056) #17	LETMD1 (ENSECAG00000014209) #18	CSRNP2 (ENSECAG00000020403) #19	TFCP2 (ENSECAG00000020650) #20	POU6F1 (ENSECAG00000024200) #21	DAZAP2 (ENSECAG00000007313) #22	ENSECAG00000047970 #23	BIN2 (ENSECAG00000009046) #24	CELA1 (ENSECAG00000012394) #25	GALNT6 (ENSECAG00000016337) #26	SLC4A8 (ENSECAG00000016910) #27	SCN8A (ENSECAG00000010751) #28	ENSECAG00000057433 #29	FIGNL2 (ENSECAG00000028937)	ANKRD33 (ENSECAG00000008512) #30	ACVRL1 (ENSECAG00000009133) #31	ACVR1B (ENSECAG00000011686) #32	TAMALIN (ENSECAG00000043794) #33	NR4A1 (ENSECAG00000016661) #34	ATG101 (ENSECAG00000019169) #35	KRT80 (ENSECAG00000019176) #37
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00390000002190.b	ENSGT01030000234515.a.a.a #7	ENSGT00940000158313 #8	ENSGT00940000163376 #9	ENSGT00940000154409 #10	ENSGT00950000182997.a.b.b.b #11	ENSGT00940000158200 #12	ENSGT00940000161878 #13	ENSGT00940000154786.e #15	ENSGT00940000162804 #16	ENSGT00940000155330 #17	ENSGT00950000183167.a.b.b.b #18	ENSGT00950000183072.b.a #19	ENSGT00940000157629.f #20	ENSGT00940000160106 #21	ENSGT00390000000685 #22	ENSGT00390000010077 #23	ENSGT00950000182882.A.a #24	ENSGT01030000234528.B.b.a.a.a #25	ENSGT00940000160845 #26	ENSGT00940000157422 #27	ENSGT00940000156263 #28	ENSGT00940000161971	ENSGT00500000044852.b #30	ENSGT00940000161446 #31	ENSGT00940000157032 #32	ENSGT00530000063734.b #33	ENSGT00950000183038.a.b.a #34	ENSGT00390000016511 #35	ENSGT00390000009755 #36	ENSGT00940000161279 #37
Megabat	MODERN SPECIES	1067												LETMD1 (ENSPVAG00000014768) #18	CSRNP2 (ENSPVAG00000014770) #19	TFCP2 (ENSPVAG00000014772) #20	POU6F1 (ENSPVAG00000014775) #21	DAZAP2 (ENSPVAG00000014777) #22	SMAGP (ENSPVAG00000014778) #23	BIN2 (ENSPVAG00000014781) #24	CELA1 (ENSPVAG00000014782) #25
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00390000002190.b	ENSGT01030000234515.a.a.a #7	ENSGT00940000158313 #8	ENSGT00940000163376 #9	ENSGT00940000154409 #10	ENSGT00950000182997.a.b.b.b #11	ENSGT00940000158200 #12	ENSGT00940000161878 #13	ENSGT00940000154786.e #15	ENSGT00940000162804 #16	ENSGT00940000155330 #17	ENSGT00950000183167.a.b.b.b #18	ENSGT00950000183072.b.a #19	ENSGT00940000157629.f #20	ENSGT00940000160106 #21	ENSGT00390000000685 #22	ENSGT00390000010077 #23	ENSGT00950000182882.A.a #24	ENSGT01030000234528.B.b.a.a.a #25	ENSGT00940000160845 #26	ENSGT00940000157422 #27	ENSGT00940000156263 #28	ENSGT00500000044852.b #30	ENSGT00940000161446 #31	ENSGT00940000157032 #32	ENSGT00530000063734.b #33	ENSGT00950000183038.a.b.a #34	ENSGT00390000016511 #35	ENSGT00390000009755 #36	ENSGT00940000161279 #37	ENSGT00940000154786.f ##15
Microbat	DUPLICATION
Microbat	MODERN SPECIES	377																ENSMLUG00000030547 #22
Microbat	MODERN SPECIES	1097												LETMD1 (ENSMLUG00000013907) #18	CSRNP2 (ENSMLUG00000013915) #19	TFCP2 (ENSMLUG00000013918) #20	POU6F1 (ENSMLUG00000009933) #21	ENSMLUG00000009959 #22	SMAGP (ENSMLUG00000009986) #23	BIN2 (ENSMLUG00000010014) #24	CELA1 (ENSMLUG00000010049) #25	GALNT6 (ENSMLUG00000010079) #26	SLC4A8 (ENSMLUG00000010105) #27	SCN8A (ENSMLUG00000009841) #28	ENSMLUG00000026338	ANKRD33 (ENSMLUG00000008906) #30	ACVRL1 (ENSMLUG00000001422) #31	ENSMLUG00000024803	ACVR1B (ENSMLUG00000004487) #32	ENSMLUG00000004492 #33	NR4A1 (ENSMLUG00000006887) #34	ATG101 (ENSMLUG00000008876) #35	KRT80 (ENSMLUG00000011732) #37
Greater horseshoe bat	MODERN SPECIES	1	ENSRFEG00010014508 #9	ENSRFEG00010014588	LARP4 (ENSRFEG00010014609) #10	DIP2B (ENSRFEG00010015063) #11	ATF1 (ENSRFEG00010015182) #12	TMPRSS12 (ENSRFEG00010015273) #13	ENSRFEG00010015370 #15	ENSRFEG00010015409	HIGD1C (ENSRFEG00010015467) #16	SLC11A2 (ENSRFEG00010015532) #17	LETMD1 (ENSRFEG00010015608) #18	CSRNP2 (ENSRFEG00010015798) #19	TFCP2 (ENSRFEG00010015869) #20	ENSRFEG00010016033	POU6F1 (ENSRFEG00010016067) #21	DAZAP2 (ENSRFEG00010016144) #22	ENSRFEG00010016566 #23	BIN2 (ENSRFEG00010016668) #24	CELA1 (ENSRFEG00010016934) #25	GALNT6 (ENSRFEG00010016956) #26	SLC4A8 (ENSRFEG00010016982) #27	SCN8A (ENSRFEG00010017085) #28	ENSRFEG00010017220	ENSRFEG00010017471 #30	ACVRL1 (ENSRFEG00010017527) #31	ACVR1B (ENSRFEG00010017734) #32	TAMALIN (ENSRFEG00010017802) #33	NR4A1 (ENSRFEG00010017879) #34	ATG101 (ENSRFEG00010017982) #35	SMIM41 (ENSRFEG00010018005) #36	KRT80 (ENSRFEG00010018028) #37