Euteleostomi ANCESTRAL SPECIES 108 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Sarcopterygii ANCESTRAL SPECIES 46 ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000158489 #11 ENSGT00950000183091.B.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Tetrapoda ANCESTRAL SPECIES 19 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000158489 #11 ENSGT00950000183091.B.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Amniota ANCESTRAL SPECIES 19 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Mammalia ANCESTRAL SPECIES 15 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Theria ANCESTRAL SPECIES 19 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Eutheria ANCESTRAL SPECIES 11 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00950000183091.B.b.a.a ##12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00950000183091.B.b.a.a ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Primates ANCESTRAL SPECIES 17 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Simiiformes ANCESTRAL SPECIES 18 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 19 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Hominoidea ANCESTRAL SPECIES 17 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.a #16 ENSGT00390000005057.b #17 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT01090000260115 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Hominidae ANCESTRAL SPECIES 18 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.a #16 ENSGT00390000005057.b #17 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00950000183120.e.b.b.b #10 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.a #16 ENSGT00390000005057.b #17 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00950000183120.e.b.b.b #10 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.a #16 ENSGT00390000005057.b #17 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Human MODERN SPECIES 12 ZBP1 (ENSG00000124256) #7 PCK1 (ENSG00000124253) #8 CTCFL (ENSG00000124092) #9 HMGB1P1 (ENSG00000124097) #10 RBM38 (ENSG00000132819) #11 RAE1 (ENSG00000101146) #12 SPO11 (ENSG00000054796) #13 BMP7 (ENSG00000101144) #14 TFAP2C (ENSG00000087510) #15 FAM209B (ENSG00000213714) #16 FAM209A (ENSG00000124103) #17 GCNT7 (ENSG00000124091) #18 RTF2 (ENSG00000022277) #19 CASS4 (ENSG00000087589) #20 CSTF1 (ENSG00000101138) #21 AURKA (ENSG00000087586) #22 FAM210B (ENSG00000124098) #23 MC3R (ENSG00000124089) #24 CBLN4 (ENSG00000054803) #25 DOK5 (ENSG00000101134) #26 PFDN4 (ENSG00000101132) #27 CYP24A1 (ENSG00000019186) #28 BCAS1 (ENSG00000064787) #29 ZNF217 (ENSG00000171940) #30 TSHZ2 (ENSG00000182463) #31 ZFP64 (ENSG00000020256) #32 SALL4 (ENSG00000101115) #33 ATP9A (ENSG00000054793) #34 NFATC2 (ENSG00000101096) #35 KCNG1 (ENSG00000026559) #36 MOCS3 (ENSG00000124217) #37 Pan ANCESTRAL SPECIES 15 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00950000183120.e.b.b.b #10 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.a #16 ENSGT00390000005057.b #17 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT00940000159728 #25 ENSGT00900000143204.a ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Chimpanzee MODERN SPECIES 11 ZBP1 (ENSPTRG00000013665) #7 PCK1 (ENSPTRG00000013664) #8 CTCFL (ENSPTRG00000013663) #9 HMGB1P1 (ENSPTRG00000044893) #10 RBM38 (ENSPTRG00000013661) #11 MTRNR2L3 (ENSPTRG00000041872) RAE1 (ENSPTRG00000013658) #12 SPO11 (ENSPTRG00000013657) #13 BMP7 (ENSPTRG00000013656) #14 TFAP2C (ENSPTRG00000013654) #15 FAM209B (ENSPTRG00000013652) #16 FAM209A (ENSPTRG00000034022) #17 RTF2 (ENSPTRG00000013649) #19 CASS4 (ENSPTRG00000013648) #20 CSTF1 (ENSPTRG00000013647) #21 AURKA (ENSPTRG00000013646) #22 FAM210B (ENSPTRG00000013645) #23 CBLN4 (ENSPTRG00000013643) #25 ENSPTRG00000050041 ENSPTRG00000044637 ENSPTRG00000048333 DOK5 (ENSPTRG00000013642) #26 PFDN4 (ENSPTRG00000013641) #27 CYP24A1 (ENSPTRG00000013640) #28 BCAS1 (ENSPTRG00000013638) #29 ENSPTRG00000045485 ZNF217 (ENSPTRG00000013636) #30 ENSPTRG00000044495 TSHZ2 (ENSPTRG00000013634) #31 ENSPTRG00000052453 ZFP64 (ENSPTRG00000013632) #32 Bonobo MODERN SPECIES 11 PCK1 (ENSPPAG00000037672) #8 CTCFL (ENSPPAG00000031741) #9 HMGB1P1 (ENSPPAG00000028336) #10 ENSPPAG00000027757 #11 ENSPPAG00000032947 RAE1 (ENSPPAG00000037209) #12 SPO11 (ENSPPAG00000036133) #13 BMP7 (ENSPPAG00000032623) #14 TFAP2C (ENSPPAG00000031621) #15 FAM209B (ENSPPAG00000031375) #16 FAM209A (ENSPPAG00000032658) #17 ENSPPAG00000031674 #18 RTF2 (ENSPPAG00000026702) #19 CASS4 (ENSPPAG00000000925) #20 CSTF1 (ENSPPAG00000037866) #21 AURKA (ENSPPAG00000031434) #22 ENSPPAG00000030559 #23 CBLN4 (ENSPPAG00000029475) #25 ENSPPAG00000029138 ENSPPAG00000026181 DOK5 (ENSPPAG00000041888) #26 PFDN4 (ENSPPAG00000041414) #27 CYP24A1 (ENSPPAG00000038708) #28 BCAS1 (ENSPPAG00000036066) #29 ZNF217 (ENSPPAG00000033439) #30 ENSPPAG00000032773 TSHZ2 (ENSPPAG00000031686) #31 ENSPPAG00000040778 ZFP64 (ENSPPAG00000028816) #32 SALL4 (ENSPPAG00000038064) #33 ATP9A (ENSPPAG00000030836) #34 Gorilla MODERN SPECIES 11 PMEPA1 (ENSGGOG00000013821) ZBP1 (ENSGGOG00000011001) #7 PCK1 (ENSGGOG00000010993) #8 CTCFL (ENSGGOG00000005761) #9 HMGB1P1 (ENSGGOG00000007804) #10 ENSGGOG00000007795 #11 ENSGGOG00000007789 #12 SPO11 (ENSGGOG00000008846) #13 BMP7 (ENSGGOG00000003803) #14 TFAP2C (ENSGGOG00000000420) #15 FAM209A (ENSGGOG00000038147) #17 ENSGGOG00000023300 #18 RTF2 (ENSGGOG00000004223) #19 CASS4 (ENSGGOG00000004217) #20 CSTF1 (ENSGGOG00000007205) #21 AURKA (ENSGGOG00000007197) #22 FAM210B (ENSGGOG00000043075) #23 MC3R (ENSGGOG00000028519) #24 CBLN4 (ENSGGOG00000010488) #25 ENSGGOG00000038418 ENSGGOG00000042206 DOK5 (ENSGGOG00000002089) #26 PFDN4 (ENSGGOG00000027337) #27 CYP24A1 (ENSGGOG00000009673) #28 BCAS1 (ENSGGOG00000001286) #29 ZNF217 (ENSGGOG00000022817) #30 ENSGGOG00000043241 TSHZ2 (ENSGGOG00000005282) #31 ENSGGOG00000026918 ZFP64 (ENSGGOG00000012030) #32 SALL4 (ENSGGOG00000001832) #33 Orangutan MODERN SPECIES 11 PMEPA1 (ENSPPYG00000041071) ZBP1 (ENSPPYG00000011165) #7 PCK1 (ENSPPYG00000011164) #8 CTCFL (ENSPPYG00000011163) #9 RBM38 (ENSPPYG00000041798) #11 ENSPPYG00000033953 RAE1 (ENSPPYG00000011159) #12 SPO11 (ENSPPYG00000011158) #13 BMP7 (ENSPPYG00000011157) #14 TFAP2C (ENSPPYG00000011156) #15 ENSPPYG00000033583 #16 ENSPPYG00000011152 #18 RTF2 (ENSPPYG00000011151) #19 CASS4 (ENSPPYG00000011150) #20 CSTF1 (ENSPPYG00000011149) #21 AURKA (ENSPPYG00000011148) #22 FAM210B (ENSPPYG00000011147) #23 MC3R (ENSPPYG00000011146) #24 CBLN4 (ENSPPYG00000011145) #25 DOK5 (ENSPPYG00000011144) #26 ENSPPYG00000025840 #27 CYP24A1 (ENSPPYG00000011143) #28 BCAS1 (ENSPPYG00000011142) #29 ZNF217 (ENSPPYG00000011140) #30 ENSPPYG00000037756 TSHZ2 (ENSPPYG00000011269) #31 ZFP64 (ENSPPYG00000011139) #32 ENSPPYG00000019918 SALL4 (ENSPPYG00000011138) #33 ENSPPYG00000011136 #34 NFATC2 (ENSPPYG00000011135) #35 Gibbon MODERN SPECIES 3 ZBP1 (ENSNLEG00000007069) #7 PCK1 (ENSNLEG00000007068) #8 CTCFL (ENSNLEG00000007062) #9 ENSNLEG00000028818 ##10 ENSNLEG00000007061 #11 RAE1 (ENSNLEG00000007055) #12 SPO11 (ENSNLEG00000007051) #13 BMP7 (ENSNLEG00000007046) #14 ENSNLEG00000007045 TFAP2C (ENSNLEG00000007042) #15 FAM209A (ENSNLEG00000007041) #17 RTF2 (ENSNLEG00000007037) #19 ENSNLEG00000028915 #18 CASS4 (ENSNLEG00000007036) #20 CSTF1 (ENSNLEG00000007034) #21 AURKA (ENSNLEG00000007029) #22 ENSNLEG00000007028 #23 MC3R (ENSNLEG00000019230) #24 CBLN4 (ENSNLEG00000007027) #25 DOK5 (ENSNLEG00000007024) #26 PFDN4 (ENSNLEG00000007023) #27 CYP24A1 (ENSNLEG00000007020) #28 ENSNLEG00000007019 #29 ENSNLEG00000013615 ZNF217 (ENSNLEG00000007017) #30 ENSNLEG00000028918 TSHZ2 (ENSNLEG00000007016) #31 ZFP64 (ENSNLEG00000007015) #32 ENSNLEG00000034384 SALL4 (ENSNLEG00000007013) #33 ATP9A (ENSNLEG00000007005) #34 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.d.b.a #11 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Olive baboon MODERN SPECIES 7 RBM38 (ENSPANG00000020919) #11 ENSPANG00000036940 RAE1 (ENSPANG00000024502) #12 SPO11 (ENSPANG00000024503) #13 BMP7 (ENSPANG00000024504) #14 TFAP2C (ENSPANG00000024505) #15 ENSPANG00000047957 ENSPANG00000030727 ENSPANG00000037577 ENSPANG00000023210 #16 ENSPANG00000032241 #16 GCNT7 (ENSPANG00000022758) #18 RTF2 (ENSPANG00000018566) #19 CASS4 (ENSPANG00000020918) #20 CSTF1 (ENSPANG00000020917) #21 AURKA (ENSPANG00000021795) #22 FAM210B (ENSPANG00000040473) #23 MC3R (ENSPANG00000043329) #24 CBLN4 (ENSPANG00000049128) #25 ENSPANG00000046400 DOK5 (ENSPANG00000021794) #26 PFDN4 (ENSPANG00000021793) #27 CYP24A1 (ENSPANG00000020783) #28 BCAS1 (ENSPANG00000020784) #29 ENSPANG00000037067 ENSPANG00000038001 ZNF217 (ENSPANG00000020786) #30 ENSPANG00000004337 TSHZ2 (ENSPANG00000049614) #31 ZFP64 (ENSPANG00000021108) #32 SALL4 (ENSPANG00000021792) #33 Cercopithecinae_d ANCESTRAL SPECIES 47 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.d.b.a #11 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00910000147689 ENSGT00390000005057.d #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 648 ZBP1 (ENSCATG00000013143) #7 PCK1 (ENSCATG00000021561) #8 CTCFL (ENSCATG00000042235) #9 RBM38 (ENSCATG00000032133) #11 RAE1 (ENSCATG00000029401) #12 SPO11 (ENSCATG00000041938) #13 BMP7 (ENSCATG00000005904) #14 TFAP2C (ENSCATG00000043757) #15 ENSCATG00000021733 #16 ENSCATG00000031399 #16 ENSCATG00000021152 RTF2 (ENSCATG00000039310) #19 GCNT7 (ENSCATG00000013240) #18 CASS4 (ENSCATG00000033801) #20 CSTF1 (ENSCATG00000031885) #21 ENSCATG00000033256 #22 FAM210B (ENSCATG00000039274) #23 CBLN4 (ENSCATG00000036053) #25 DOK5 (ENSCATG00000029158) #26 PFDN4 (ENSCATG00000042568) #27 CYP24A1 (ENSCATG00000043442) #28 BCAS1 (ENSCATG00000031760) #29 ENSCATG00000015802 ZNF217 (ENSCATG00000032669) #30 ENSCATG00000022997 TSHZ2 (ENSCATG00000039930) #31 ZFP64 (ENSCATG00000042266) #32 ENSCATG00000041010 SALL4 (ENSCATG00000030757) #33 ATP9A (ENSCATG00000044505) #34 NFATC2 (ENSCATG00000042896) #35 Sooty mangabey MODERN SPECIES 422 CAMK1D (ENSCATG00000031901) ENSCATG00000014424 CCDC3 (ENSCATG00000031022) OPTN (ENSCATG00000040173) ENSCATG00000039338 #22 MCM10 (ENSCATG00000032727) UCMA (ENSCATG00000040215) Drill MODERN SPECIES 711 ZBP1 (ENSMLEG00000031509) #7 PCK1 (ENSMLEG00000043825) #8 CTCFL (ENSMLEG00000030367) #9 ENSMLEG00000027505 #11 RAE1 (ENSMLEG00000037014) #12 SPO11 (ENSMLEG00000043384) #13 ENSMLEG00000042018 #14 TFAP2C (ENSMLEG00000030578) #15 ENSMLEG00000043662 #16 ENSMLEG00000013626 ENSMLEG00000025747 #16 GCNT7 (ENSMLEG00000031478) #18 RTF2 (ENSMLEG00000036789) #19 CASS4 (ENSMLEG00000037604) #20 CSTF1 (ENSMLEG00000016128) #21 AURKA (ENSMLEG00000003588) #22 FAM210B (ENSMLEG00000036070) #23 CBLN4 (ENSMLEG00000018831) #25 DOK5 (ENSMLEG00000035038) #26 PFDN4 (ENSMLEG00000042229) #27 CYP24A1 (ENSMLEG00000038601) #28 BCAS1 (ENSMLEG00000028154) #29 ZNF217 (ENSMLEG00000028314) #30 ENSMLEG00000025465 TSHZ2 (ENSMLEG00000033081) #31 ENSMLEG00000036978 ZFP64 (ENSMLEG00000036238) #32 SALL4 (ENSMLEG00000030467) #33 ATP9A (ENSMLEG00000031475) #34 ENSMLEG00000000428 NFATC2 (ENSMLEG00000034598) #35 Macaca ANCESTRAL SPECIES 16 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00390000018566.j ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Pig-tailed macaque MODERN SPECIES 462 PMEPA1 (ENSMNEG00000042458) ZBP1 (ENSMNEG00000043957) #7 PCK1 (ENSMNEG00000039000) #8 CTCFL (ENSMNEG00000040577) #9 RBM38 (ENSMNEG00000034683) #11 RAE1 (ENSMNEG00000043504) #12 SPO11 (ENSMNEG00000040588) #13 BMP7 (ENSMNEG00000007460) #14 TFAP2C (ENSMNEG00000041419) #15 ENSMNEG00000041000 #16 ENSMNEG00000031630 #16 RTF2 (ENSMNEG00000002223) #19 GCNT7 (ENSMNEG00000042982) #18 CASS4 (ENSMNEG00000041494) #20 CSTF1 (ENSMNEG00000028759) #21 AURKA (ENSMNEG00000020907) #22 FAM210B (ENSMNEG00000031940) #23 CBLN4 (ENSMNEG00000028083) #25 DOK5 (ENSMNEG00000005921) #26 PFDN4 (ENSMNEG00000028087) #27 CYP24A1 (ENSMNEG00000039138) #28 BCAS1 (ENSMNEG00000039962) #29 ZNF217 (ENSMNEG00000029796) #30 ENSMNEG00000028135 TSHZ2 (ENSMNEG00000040060) #31 ZFP64 (ENSMNEG00000040581) #32 ENSMNEG00000034407 SALL4 (ENSMNEG00000035995) #33 ATP9A (ENSMNEG00000023182) #34 NFATC2 (ENSMNEG00000034579) #35 KCNG1 (ENSMNEG00000029109) #36 Macaca_a ANCESTRAL SPECIES 18 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.b.b.a ENSGT00940000158489.c #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.c #16 ENSGT00390000005057.d #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.b.b.a.b ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a.d ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Rhesus MODERN SPECIES 1 ZBP1 (ENSMMUG00000022588) #7 PCK1 (ENSMMUG00000022586) #8 CTCFL (ENSMMUG00000016802) #9 ENSMMUG00000050216 RBM38 (ENSMMUG00000031391) #11 RAE1 (ENSMMUG00000000252) #12 SPO11 (ENSMMUG00000050707) #13 BMP7 (ENSMMUG00000004074) #14 TFAP2C (ENSMMUG00000009364) #15 ENSMMUG00000000079 #16 ENSMMUG00000046647 #16 GCNT7 (ENSMMUG00000062215) #18 RTF2 (ENSMMUG00000000074) #19 CASS4 (ENSMMUG00000000073) #20 CSTF1 (ENSMMUG00000000072) #21 AURKA (ENSMMUG00000000070) #22 FAM210B (ENSMMUG00000061353) #23 MC3R (ENSMMUG00000051905) #24 CBLN4 (ENSMMUG00000006005) #25 ENSMMUG00000056122 ENSMMUG00000053508 DOK5 (ENSMMUG00000007090) #26 PFDN4 (ENSMMUG00000017300) #27 CYP24A1 (ENSMMUG00000014860) #28 BCAS1 (ENSMMUG00000020082) #29 ENSMMUG00000043345 ZNF217 (ENSMMUG00000018358) #30 TSHZ2 (ENSMMUG00000013035) #31 ZFP64 (ENSMMUG00000018846) #32 SALL4 (ENSMMUG00000003870) #33 ENSMMUG00000064070 Crab-eating macaque MODERN SPECIES 1 ZBP1 (ENSMFAG00000030920) #7 PCK1 (ENSMFAG00000043755) #8 CTCFL (ENSMFAG00000037641) #9 ENSMFAG00000061711 RBM38 (ENSMFAG00000043808) #11 RAE1 (ENSMFAG00000043344) #12 SPO11 (ENSMFAG00000031364) #13 BMP7 (ENSMFAG00000032242) #14 TFAP2C (ENSMFAG00000004040) #15 ENSMFAG00000046392 #16 ENSMFAG00000035848 #16 GCNT7 (ENSMFAG00000042446) #18 RTF2 (ENSMFAG00000002272) #19 CASS4 (ENSMFAG00000045759) #20 CSTF1 (ENSMFAG00000003531) #21 AURKA (ENSMFAG00000001851) #22 FAM210B (ENSMFAG00000056763) #23 ENSMFAG00000047548 MC3R (ENSMFAG00000062266) #24 CBLN4 (ENSMFAG00000058053) #25 ENSMFAG00000062425 DOK5 (ENSMFAG00000032194) #26 PFDN4 (ENSMFAG00000002174) #27 CYP24A1 (ENSMFAG00000046397) #28 BCAS1 (ENSMFAG00000033646) #29 ENSMFAG00000025867 ZNF217 (ENSMFAG00000041447) #30 TSHZ2 (ENSMFAG00000044946) #31 ENSMFAG00000063669 ENSMFAG00000060520 ZFP64 (ENSMFAG00000034598) #32 Vervet Monkey MODERN SPECIES 11 C20orf85 (ENSCSAG00000015520) PMEPA1 (ENSCSAG00000015515) PCK1 (ENSCSAG00000015512) #8 RBM38 (ENSCSAG00000015503) #11 RAE1 (ENSCSAG00000015487) #12 ENSCSAG00000018740 SPO11 (ENSCSAG00000015473) #13 BMP7 (ENSCSAG00000015448) #14 TFAP2C (ENSCSAG00000015443) #15 ENSCSAG00000015439 #16 ENSCSAG00000015434 #16 RTF2 (ENSCSAG00000015426) #19 GCNT7 (ENSCSAG00000015423) #18 CASS4 (ENSCSAG00000015418) #20 CSTF1 (ENSCSAG00000015411) #21 AURKA (ENSCSAG00000015393) #22 FAM210B (ENSCSAG00000015346) #23 MC3R (ENSCSAG00000018741) #24 CBLN4 (ENSCSAG00000015334) #25 DOK5 (ENSCSAG00000015329) #26 PFDN4 (ENSCSAG00000015325) #27 CYP24A1 (ENSCSAG00000015320) #28 BCAS1 (ENSCSAG00000015313) #29 ENSCSAG00000018742 ZNF217 (ENSCSAG00000015287) #30 ENSCSAG00000018743 TSHZ2 (ENSCSAG00000018744) #31 ZFP64 (ENSCSAG00000015277) #32 SALL4 (ENSCSAG00000015269) #33 ATP9A (ENSCSAG00000015260) #34 NFATC2 (ENSCSAG00000015242) #35 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 548 ENSGT00390000005057.d #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.e.c #22 ENSGT00940000156134.e #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 617 TINAG (ENSRROG00000035923) ENSRROG00000011633 MLIP (ENSRROG00000029163) ENSRROG00000031084 LRRC1 (ENSRROG00000039946) KLHL31 (ENSRROG00000034480) GCLC (ENSRROG00000039518) ELOVL5 (ENSRROG00000038948) GCM1 (ENSRROG00000032236) FBXO9 (ENSRROG00000029600) CILK1 (ENSRROG00000034096) GSTA4 (ENSRROG00000029994) GSTA1 (ENSRROG00000044471) ENSRROG00000041870 #22 TMEM14A (ENSRROG00000041634) ENSRROG00000030207 TRAM2 (ENSRROG00000036043) EFHC1 (ENSRROG00000022951) ENSRROG00000023565 ENSRROG00000039209 PAQR8 (ENSRROG00000006635) MCM3 (ENSRROG00000045226) ENSRROG00000040384 IL17F (ENSRROG00000010614) ENSRROG00000043580 IL17A (ENSRROG00000040427) PKHD1 (ENSRROG00000035962) TFAP2B (ENSRROG00000036382) ##15 ENSRROG00000014074 Golden snub-nosed monkey MODERN SPECIES 3304 RAB3IP (ENSRROG00000030482) BEST3 (ENSRROG00000037058) LRRC10 (ENSRROG00000027186) CCT2 (ENSRROG00000028760) FRS2 (ENSRROG00000040727) YEATS4 (ENSRROG00000037644) LYZ (ENSRROG00000033846) CPSF6 (ENSRROG00000042758) CPM (ENSRROG00000043552) ENSRROG00000045589 ENSRROG00000041180 SLC35E3 (ENSRROG00000043342) NUP107 (ENSRROG00000040209) RAP1B (ENSRROG00000030238) ENSRROG00000002729 ENSRROG00000042652 #22 MDM1 (ENSRROG00000031790) IL22 (ENSRROG00000031370) IL26 (ENSRROG00000040267) Golden snub-nosed monkey MODERN SPECIES 3117 ENSRROG00000034227 #16 RTF2 (ENSRROG00000033279) #19 GCNT7 (ENSRROG00000036623) #18 CASS4 (ENSRROG00000041944) #20 CSTF1 (ENSRROG00000006757) #21 ENSRROG00000040148 #22 FAM210B (ENSRROG00000036571) #23 MC3R (ENSRROG00000005961) #24 CBLN4 (ENSRROG00000043047) #25 Black snub-nosed monkey MODERN SPECIES 314 ENSRBIG00000042615 #16 RTF2 (ENSRBIG00000029928) #19 GCNT7 (ENSRBIG00000008757) #18 CASS4 (ENSRBIG00000032114) #20 CSTF1 (ENSRBIG00000042407) #21 ENSRBIG00000042086 #22 FAM210B (ENSRBIG00000028911) #23 MC3R (ENSRBIG00000001243) #24 CBLN4 (ENSRBIG00000031342) #25 SHISA3 (ENSRBIG00000035663) ATP8A1 (ENSRBIG00000031899) NECAB1 (ENSRBIG00000023718) ENSRBIG00000039255 C8orf88 (ENSRBIG00000038662) PIP4P2 (ENSRBIG00000034914) OTUD6B (ENSRBIG00000042718) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES ENSGT00940000154900.e.d.a #22 Golden snub-nosed monkey MODERN SPECIES 2016 SEC13 (ENSRROG00000040800) ATP2B2 (ENSRROG00000033593) SLC6A11 (ENSRROG00000031463) SLC6A1 (ENSRROG00000040161) ENSRROG00000044510 HRH1 (ENSRROG00000012382) ATG7 (ENSRROG00000041008) ENSRROG00000038335 VGLL4 (ENSRROG00000032842) TAMM41 (ENSRROG00000034628) ENSRROG00000042628 SYN2 (ENSRROG00000040768) TIMP4 (ENSRROG00000043357) PPARG (ENSRROG00000044807) ENSRROG00000034587 #22 TSEN2 (ENSRROG00000041156) MKRN2OS (ENSRROG00000037999) MKRN2 (ENSRROG00000033767) ENSRROG00000041930 Black snub-nosed monkey MODERN SPECIES 1208 TIMP4 (ENSRBIG00000032580) SYN2 (ENSRBIG00000030722) ENSRBIG00000029744 ENSRBIG00000036452 #22 ENSRBIG00000033045 UCK2 (ENSRBIG00000023390) ENSRBIG00000028586 Rhinopithecus ANCESTRAL SPECIES 92 ENSGT00940000156509 ENSGT00940000159413 ENSGT00950000183215.c.a.a ENSGT00950000183163.a.b.c ENSGT00950000182941.a.a.a ENSGT00940000159155 ENSGT00940000157264 ENSGT00940000160083 ENSGT00910000146884 ENSGT00940000157314.A ENSGT00940000161124 ENSGT00510000048929 ENSGT00940000160850 ENSGT00940000154296.jb.b ENSGT00940000153876.B.i ENSGT00940000154900.e.d.b #22 ENSGT00940000158448 ENSGT00530000063484.a.c ENSGT00530000064150 ENSGT00740000116829 ENSGT00940000160412 ENSGT00950000182963.a.a ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.b.a.b.b.b.b.b.a.a.a.b.b ENSGT00500000044870.a ENSGT00940000158839 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00940000157418 ENSGT00530000063624.A Black snub-nosed monkey MODERN SPECIES 1850 ENSRBIG00000010479 ENSRBIG00000034597 #22 TNFAIP3 (ENSRBIG00000034026) ENSRBIG00000025427 Golden snub-nosed monkey MODERN SPECIES 2152 PDE7B (ENSRROG00000044535) MTFR2 (ENSRROG00000034463) BCLAF1 (ENSRROG00000040259) MAP7 (ENSRROG00000017668) ENSRROG00000013913 MAP3K5 (ENSRROG00000031252) PEX7 (ENSRROG00000036829) SLC35D3 (ENSRROG00000035626) ENSRROG00000038139 IL20RA (ENSRROG00000007730) IL22RA2 (ENSRROG00000002783) IFNGR1 (ENSRROG00000035100) OLIG3 (ENSRROG00000019602) ENSRROG00000036262 ENSRROG00000041568 ENSRROG00000041456 #22 TNFAIP3 (ENSRROG00000041571) PERP (ENSRROG00000034877) ARFGEF3 (ENSRROG00000030285) SMIM28 (ENSRROG00000031229) HEBP2 (ENSRROG00000034383) NHSL1 (ENSRROG00000005383) ENSRROG00000043594 CCDC28A (ENSRROG00000006207) ECT2L (ENSRROG00000021187) REPS1 (ENSRROG00000002530) ABRACL (ENSRROG00000038800) HECA (ENSRROG00000041614) TXLNB (ENSRROG00000036136) CITED2 (ENSRROG00000039615) Catarrhini ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Pan ANCESTRAL SPECIES ENSGT00940000162464 ENSGT00940000157407 ENSGT00390000016736.b ENSGT00390000006681 ENSGT00390000016465 ENSGT00950000182767.a.a ENSGT00390000011405 ENSGT00940000161139 ENSGT00940000157671 ENSGT00950000183093.C ENSGT00940000162410 ENSGT00940000159665 ENSGT00390000004585 ENSGT00940000157560.e ENSGT00390000017839.o.b.b.a.b ENSGT00940000154900.f ##22 ENSGT00390000005794 ENSGT00550000074910 ENSGT00940000157359 ENSGT00550000074815 ENSGT00940000159967 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000011270 ENSGT00410000025698.a ENSGT00940000153433.B.a.b ENSGT00940000158456 ENSGT00940000153881.a ENSGT00910000147483 ENSGT00940000156560 Chimpanzee MODERN SPECIES AIDA (ENSPTRG00000002010) ENSPTRG00000052614 MIA3 (ENSPTRG00000052232) TAF1A (ENSPTRG00000002007) HHIPL2 (ENSPTRG00000002006) ENSPTRG00000045546 DUSP10 (ENSPTRG00000002005) HLX (ENSPTRG00000002004) MTARC1 (ENSPTRG00000002003) MTARC2 (ENSPTRG00000002002) C1H1orf115 (ENSPTRG00000047775) MARK1 (ENSPTRG00000002000) ENSPTRG00000048086 ENSPTRG00000046120 ENSPTRG00000047107 ENSPTRG00000049590 ##22 ENSPTRG00000052357 RAB3GAP2 (ENSPTRG00000001999) IARS2 (ENSPTRG00000001997) BPNT1 (ENSPTRG00000001996) EPRS1 (ENSPTRG00000001995) SLC30A10 (ENSPTRG00000001994) LYPLAL1 (ENSPTRG00000001993) TGFB2 (ENSPTRG00000001992) RRP15 (ENSPTRG00000039779) SPATA17 (ENSPTRG00000001988) GPATCH2 (ENSPTRG00000001986) ESRRG (ENSPTRG00000023622) USH2A (ENSPTRG00000001984) KCTD3 (ENSPTRG00000001979) ENSPTRG00000046254 Bonobo MODERN SPECIES BROX (ENSPPAG00000039244) ENSPPAG00000034152 ENSPPAG00000034603 MIA3 (ENSPPAG00000034682) TAF1A (ENSPPAG00000038647) HHIPL2 (ENSPPAG00000042275) ENSPPAG00000041428 DUSP10 (ENSPPAG00000035438) ENSPPAG00000039905 HLX (ENSPPAG00000031929) MTARC1 (ENSPPAG00000040763) MTARC2 (ENSPPAG00000001103) C1orf115 (ENSPPAG00000042551) MARK1 (ENSPPAG00000034966) ENSPPAG00000032071 ENSPPAG00000027472 ##22 RAB3GAP2 (ENSPPAG00000041652) IARS2 (ENSPPAG00000029870) BPNT1 (ENSPPAG00000030575) EPRS1 (ENSPPAG00000036757) SLC30A10 (ENSPPAG00000041238) LYPLAL1 (ENSPPAG00000038656) TGFB2 (ENSPPAG00000030603) RRP15 (ENSPPAG00000042109) ENSPPAG00000018811 SPATA17 (ENSPPAG00000031018) GPATCH2 (ENSPPAG00000038887) ESRRG (ENSPPAG00000035120) USH2A (ENSPPAG00000030873) KCTD3 (ENSPPAG00000041980) ENSPPAG00000034142 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000154900.f ##22 Golden snub-nosed monkey MODERN SPECIES 1377 MTARC1 (ENSRROG00000042311) MTARC2 (ENSRROG00000035861) C1orf115 (ENSRROG00000045358) MARK1 (ENSRROG00000034053) ENSRROG00000008342 ENSRROG00000044668 ##22 RAB3GAP2 (ENSRROG00000032167) IARS2 (ENSRROG00000013275) BPNT1 (ENSRROG00000029148) EPRS1 (ENSRROG00000039885) Black snub-nosed monkey MODERN SPECIES 305 ENSRBIG00000039759 MIA3 (ENSRBIG00000033779) TAF1A (ENSRBIG00000033404) HHIPL2 (ENSRBIG00000040993) ENSRBIG00000037388 DUSP10 (ENSRBIG00000037579) ENSRBIG00000039941 HLX (ENSRBIG00000013026) MTARC1 (ENSRBIG00000019755) MTARC2 (ENSRBIG00000036388) C1orf115 (ENSRBIG00000022485) MARK1 (ENSRBIG00000040706) ENSRBIG00000044372 ENSRBIG00000008972 RAB3GAP2 (ENSRBIG00000027351) ENSRBIG00000033068 ##22 IARS2 (ENSRBIG00000002958) BPNT1 (ENSRBIG00000043345) EPRS1 (ENSRBIG00000034767) SLC30A10 (ENSRBIG00000028231) LYPLAL1 (ENSRBIG00000026721) TGFB2 (ENSRBIG00000013890) RRP15 (ENSRBIG00000033496) SPATA17 (ENSRBIG00000037273) GPATCH2 (ENSRBIG00000028371) ESRRG (ENSRBIG00000028583) USH2A (ENSRBIG00000044398) KCTD3 (ENSRBIG00000042097) ENSRBIG00000036717 KCNK2 (ENSRBIG00000041890) Platyrrhini ANCESTRAL SPECIES 11 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.vb #27 ENSGT00940000153313.C.b ENSGT00390000006865 ENSGT00940000160161 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a ENSGT00940000159884.a #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 Cebidae ANCESTRAL SPECIES 13 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b.r #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.vb #27 ENSGT00940000153313.C.b ENSGT00390000006865 ENSGT00940000160161 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a ENSGT00940000159884.a #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 Marmoset MODERN SPECIES 17 PMEPA1 (ENSCJAG00000086391) ZBP1 (ENSCJAG00000019094) #7 PCK1 (ENSCJAG00000042408) #8 ENSCJAG00000065101 CTCFL (ENSCJAG00000019109) #9 RBM38 (ENSCJAG00000019139) #11 SPO11 (ENSCJAG00000019147) #13 BMP7 (ENSCJAG00000019172) #14 ENSCJAG00000078870 TFAP2C (ENSCJAG00000011343) #15 ENSCJAG00000011338 #16 GCNT7 (ENSCJAG00000011336) #18 RTF2 (ENSCJAG00000011308) #19 CASS4 (ENSCJAG00000011299) #20 ENSCJAG00000011281 #21 AURKA (ENSCJAG00000011266) #22 FAM210B (ENSCJAG00000041865) #23 MC3R (ENSCJAG00000011249) #24 CBLN4 (ENSCJAG00000080243) #25 ENSCJAG00000079632 DOK5 (ENSCJAG00000002600) #26 ENSCJAG00000022488 ENSCJAG00000080357 ENSCJAG00000084558 AKAP3 (ENSCJAG00000002622) NDUFA9 (ENSCJAG00000002625) ENSCJAG00000020407 CYP24A1 (ENSCJAG00000000625) #28 BCAS1 (ENSCJAG00000000622) #29 ENSCJAG00000084109 ENSCJAG00000023203 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b.r #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.vb #27 ENSGT00940000153313.C.b ENSGT00390000006865 ENSGT00940000160161 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000154319.u.a ENSGT00940000159884.a #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 Capuchin MODERN SPECIES 99 PMEPA1 (ENSCCAG00000027264) ZBP1 (ENSCCAG00000009469) #7 PCK1 (ENSCCAG00000036283) #8 CTCFL (ENSCCAG00000026632) #9 RBM38 (ENSCCAG00000036872) #11 RAE1 (ENSCCAG00000022835) #12 SPO11 (ENSCCAG00000022540) #13 BMP7 (ENSCCAG00000022185) #14 TFAP2C (ENSCCAG00000019946) #15 ENSCCAG00000029975 #16 RTF2 (ENSCCAG00000030126) #19 GCNT7 (ENSCCAG00000010825) #18 CASS4 (ENSCCAG00000016222) #20 ENSCCAG00000014975 CSTF1 (ENSCCAG00000030350) #21 AURKA (ENSCCAG00000022095) #22 FAM210B (ENSCCAG00000029562) #23 MC3R (ENSCCAG00000013742) #24 CBLN4 (ENSCCAG00000029551) #25 DOK5 (ENSCCAG00000030738) #26 ENSCCAG00000026393 #27 AKAP3 (ENSCCAG00000023272) NDUFA9 (ENSCCAG00000026763) ST3GAL5 (ENSCCAG00000031165) POLR1A (ENSCCAG00000019839) PTCD3 (ENSCCAG00000028481) IMMT (ENSCCAG00000033500) MRPL35 (ENSCCAG00000034626) REEP1 (ENSCCAG00000031799) KDM3A (ENSCCAG00000022984) CHMP3 (ENSCCAG00000027121) Bolivian squirrel monkey MODERN SPECIES 93 ZBP1 (ENSSBOG00000032730) #7 PCK1 (ENSSBOG00000020912) #8 CTCFL (ENSSBOG00000029240) #9 RBM38 (ENSSBOG00000031053) #11 RAE1 (ENSSBOG00000027737) #12 SPO11 (ENSSBOG00000032033) #13 BMP7 (ENSSBOG00000029401) #14 ENSSBOG00000030411 ENSSBOG00000019282 ENSSBOG00000028726 #15 ENSSBOG00000026573 #16 GCNT7 (ENSSBOG00000025565) #18 RTF2 (ENSSBOG00000032473) #19 CASS4 (ENSSBOG00000030702) #20 CSTF1 (ENSSBOG00000024921) #21 AURKA (ENSSBOG00000007729) #22 FAM210B (ENSSBOG00000024853) #23 MC3R (ENSSBOG00000011355) #24 CBLN4 (ENSSBOG00000027027) #25 DOK5 (ENSSBOG00000034460) #26 ENSSBOG00000032651 #27 ENSSBOG00000027064 NDUFA9 (ENSSBOG00000023634) GALNT8 (ENSSBOG00000023511) CYP24A1 (ENSSBOG00000033981) #28 BCAS1 (ENSSBOG00000027776) #29 ENSSBOG00000017716 ZNF217 (ENSSBOG00000023737) #30 ENSSBOG00000018726 TSHZ2 (ENSSBOG00000024081) #31 ZFP64 (ENSSBOG00000026654) #32 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1347 ANKRD60 (ENSANAG00000037028) C20orf85 (ENSANAG00000022786) ENSANAG00000037500 ZBP1 (ENSANAG00000038003) #7 PCK1 (ENSANAG00000023372) #8 CTCFL (ENSANAG00000024428) #9 RBM38 (ENSANAG00000031959) #11 RAE1 (ENSANAG00000030498) #12 SPO11 (ENSANAG00000034371) #13 BMP7 (ENSANAG00000036616) #14 TFAP2C (ENSANAG00000038475) #15 GCNT7 (ENSANAG00000038307) #18 RTF2 (ENSANAG00000028030) #19 CASS4 (ENSANAG00000030932) #20 CSTF1 (ENSANAG00000033317) #21 ENSANAG00000038011 #22 FAM210B (ENSANAG00000035348) #23 MC3R (ENSANAG00000006077) #24 CBLN4 (ENSANAG00000027031) #25 DOK5 (ENSANAG00000016760) #26 AKAP3 (ENSANAG00000029990) NDUFA9 (ENSANAG00000036928) CYP24A1 (ENSANAG00000028217) #28 BCAS1 (ENSANAG00000019184) #29 ENSANAG00000028551 ENSANAG00000036769 #30 ENSANAG00000005571 TSHZ2 (ENSANAG00000038357) #31 ZFP64 (ENSANAG00000034694) #32 SALL4 (ENSANAG00000023352) #33 ATP9A (ENSANAG00000032631) #34 Mas night monkey MODERN SPECIES 844 ENSANAG00000005727 COQ5 (ENSANAG00000038352) RNF10 (ENSANAG00000021356) POP5 (ENSANAG00000023744) CABP1 (ENSANAG00000024335) MLEC (ENSANAG00000038365) UNC119B (ENSANAG00000038463) ACADS (ENSANAG00000020561) ENSANAG00000036744 SPPL3 (ENSANAG00000023007) HNF1A (ENSANAG00000020753) ENSANAG00000038481 OASL (ENSANAG00000024063) ENSANAG00000023846 ENSANAG00000036614 ENSANAG00000035687 #22 P2RX7 (ENSANAG00000023576) P2RX4 (ENSANAG00000027811) CAMKK2 (ENSANAG00000031846) ANAPC5 (ENSANAG00000038447) ENSANAG00000020320 ENSANAG00000026949 ENSANAG00000024120 ORAI1 (ENSANAG00000036652) MORN3 (ENSANAG00000020830) Tarsier MODERN SPECIES 4824 ENSTSYG00000012555 #16 RTFDC1 (ENSTSYG00000005488) #19 CASS4 (ENSTSYG00000010918) #20 CSTF1 (ENSTSYG00000003181) #21 AURKA (ENSTSYG00000036090) #22 ENSTSYG00000035510 #23 Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Mouse lemur MODERN SPECIES 9 ANKRD60 (ENSMICG00000001741) C20orf85 (ENSMICG00000035405) PMEPA1 (ENSMICG00000038326) ZBP1 (ENSMICG00000046613) #7 PCK1 (ENSMICG00000043054) #8 ENSMICG00000043482 #9 RBM38 (ENSMICG00000038011) #11 RAE1 (ENSMICG00000005704) #12 SPO11 (ENSMICG00000000678) #13 BMP7 (ENSMICG00000005700) #14 TFAP2C (ENSMICG00000030931) #15 GCNT7 (ENSMICG00000045498) #18 RTF2 (ENSMICG00000034383) #19 CASS4 (ENSMICG00000004650) #20 CSTF1 (ENSMICG00000004648) #21 AURKA (ENSMICG00000004643) #22 FAM210B (ENSMICG00000047974) #23 ENSMICG00000040906 ENSMICG00000043597 CBLN4 (ENSMICG00000026678) #25 ENSMICG00000004645 #28 BCAS1 (ENSMICG00000004635) #29 ZNF217 (ENSMICG00000009450) #30 ENSMICG00000045708 CYP24A1 (ENSMICG00000029179) #28 PFDN4 (ENSMICG00000004651) #27 DOK5 (ENSMICG00000004144) #26 ENSMICG00000015229 SNRPB2 (ENSMICG00000015404) OTOR (ENSMICG00000043592) PCSK2 (ENSMICG00000004252) Lemuriformes_a ANCESTRAL SPECIES 70 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Coquerels sifaka MODERN SPECIES 340 RBM38 (ENSPCOG00000026201) #11 ENSPCOG00000027779 #12 SPO11 (ENSPCOG00000022114) #13 BMP7 (ENSPCOG00000011212) #14 TFAP2C (ENSPCOG00000007428) #15 ENSPCOG00000019821 #16 GCNT7 (ENSPCOG00000020640) #18 RTF2 (ENSPCOG00000005968) #19 CASS4 (ENSPCOG00000019485) #20 CSTF1 (ENSPCOG00000020146) #21 AURKA (ENSPCOG00000015207) #22 FAM210B (ENSPCOG00000022573) #23 CBLN4 (ENSPCOG00000020998) #25 ENSPCOG00000026343 DOK5 (ENSPCOG00000017168) #26 ENSPCOG00000018423 #27 CYP24A1 (ENSPCOG00000012205) #28 BCAS1 (ENSPCOG00000021951) #29 ZNF217 (ENSPCOG00000000038) #30 ENSPCOG00000010827 Greater bamboo lemur MODERN SPECIES 665 PMEPA1 (ENSPSMG00000000761) ENSPSMG00000000731 #7 PCK1 (ENSPSMG00000000719) #8 ENSPSMG00000000700 #9 RBM38 (ENSPSMG00000000690) #11 RAE1 (ENSPSMG00000000663) #12 SPO11 (ENSPSMG00000000622) #13 BMP7 (ENSPSMG00000000557) #14 TFAP2C (ENSPSMG00000000517) #15 ENSPSMG00000000507 #16 GCNT7 (ENSPSMG00000000506) #18 RTF2 (ENSPSMG00000000441) #19 CASS4 (ENSPSMG00000000305) #20 CSTF1 (ENSPSMG00000000272) #21 AURKA (ENSPSMG00000000225) #22 FAM210B (ENSPSMG00000000105) #23 MC3R (ENSPSMG00000023712) #24 CBLN4 (ENSPSMG00000023704) #25 DOK5 (ENSPSMG00000023699) #26 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 138 C20orf85 (ENSOGAG00000003886) PMEPA1 (ENSOGAG00000014675) ZBP1 (ENSOGAG00000014671) #7 PCK1 (ENSOGAG00000014667) #8 CTCFL (ENSOGAG00000014657) #9 RBM38 (ENSOGAG00000029136) #11 RAE1 (ENSOGAG00000014649) #12 SPO11 (ENSOGAG00000014639) #13 BMP7 (ENSOGAG00000014634) #14 ENSOGAG00000033901 #15 ENSOGAG00000028848 #16 GCNT7 (ENSOGAG00000004446) #18 RTF2 (ENSOGAG00000004444) #19 CASS4 (ENSOGAG00000034431) #20 CSTF1 (ENSOGAG00000004442) #21 ENSOGAG00000004441 #22 FAM210B (ENSOGAG00000004440) #23 MC3R (ENSOGAG00000004439) #24 CBLN4 (ENSOGAG00000001413) #25 DOK5 (ENSOGAG00000005109) #26 PFDN4 (ENSOGAG00000016375) #27 CYP24A1 (ENSOGAG00000016370) #28 BCAS1 (ENSOGAG00000000952) #29 ZNF217 (ENSOGAG00000001685) #30 ENSOGAG00000033043 TSHZ2 (ENSOGAG00000008544) #31 ZFP64 (ENSOGAG00000005192) #32 SALL4 (ENSOGAG00000013799) #33 ATP9A (ENSOGAG00000013793) #34 NFATC2 (ENSOGAG00000013787) #35 KCNG1 (ENSOGAG00000028070) #36 Bushbaby MODERN SPECIES 146 COL11A2 (ENSOGAG00000025975) ENSOGAG00000034269 ENSOGAG00000016138 HLA-DPA1 (ENSOGAG00000006476) HLA-DOA (ENSOGAG00000014685) BRD2 (ENSOGAG00000006473) HLA-DMA (ENSOGAG00000006029) HLA-DMB (ENSOGAG00000032749) ENSOGAG00000013823 PSMB9 (ENSOGAG00000013846) TAP1 (ENSOGAG00000013836) PSMB8 (ENSOGAG00000013830) ENSOGAG00000031343 HLA-DQB1 (ENSOGAG00000005662) ENSOGAG00000008401 ENSOGAG00000030012 #22 ENSOGAG00000009732 HLA-DRA (ENSOGAG00000008398) BTNL2 (ENSOGAG00000008396) ENSOGAG00000025050 ENSOGAG00000013069 ENSOGAG00000025825 NOTCH4 (ENSOGAG00000010193) GPSM3 (ENSOGAG00000032276) PBX2 (ENSOGAG00000016303) AGER (ENSOGAG00000030141) RNF5 (ENSOGAG00000031466) AGPAT1 (ENSOGAG00000010187) EGFL8 (ENSOGAG00000029110) PPT2 (ENSOGAG00000010185) PRRT1 (ENSOGAG00000010181) Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00950000183091.B.b.a.a ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Tree shrew MODERN SPECIES 7887 CSTF1 (ENSTBEG00000013454) #21 AURKA (ENSTBEG00000013284) #22 FAM210B (ENSTBEG00000013227) #23 Glires ANCESTRAL SPECIES 17 ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00950000183091.B.b.a.a ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Rodentia ANCESTRAL SPECIES 18 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Myomorpha ANCESTRAL SPECIES 9 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00980000199289 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Muroidea ANCESTRAL SPECIES 7 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 664 1700021F07Rik (ENSMAUG00000021708) ENSMAUG00000009751 Pmepa1 (ENSMAUG00000001177) Zbp1 (ENSMAUG00000001095) #7 Pck1 (ENSMAUG00000020497) #8 ENSMAUG00000007706 #9 Rbm38 (ENSMAUG00000021211) #11 Rae1 (ENSMAUG00000015549) #12 Spo11 (ENSMAUG00000020198) #13 Bmp7 (ENSMAUG00000015344) #14 Tfap2c (ENSMAUG00000019572) #15 Gcnt7 (ENSMAUG00000001661) #18 Rtf2 (ENSMAUG00000007866) #19 Cass4 (ENSMAUG00000016962) #20 Cstf1 (ENSMAUG00000021501) #21 ENSMAUG00000008679 #22 Fam210b (ENSMAUG00000020693) #23 Mc3r (ENSMAUG00000006998) #24 Cbln4 (ENSMAUG00000013556) #25 ENSMAUG00000001483 Pfdn4 (ENSMAUG00000002277) #27 Cyp24a1 (ENSMAUG00000013246) #28 ENSMAUG00000015308 #29 ENSMAUG00000003995 #31 Zfp64 (ENSMAUG00000015438) #32 Sall4 (ENSMAUG00000015814) #33 Atp9a (ENSMAUG00000004916) #34 Nfatc2 (ENSMAUG00000011773) #35 Kcng1 (ENSMAUG00000015676) #36 Mocs3 (ENSMAUG00000007351) #37 Dpm1 (ENSMAUG00000016233) Golden Hamster MODERN SPECIES 632 Ccdc149 (ENSMAUG00000001813) Dhx15 (ENSMAUG00000011535) Ppargc1a (ENSMAUG00000011811) ENSMAUG00000006861 ENSMAUG00000007935 Adgra3 (ENSMAUG00000012066) ENSMAUG00000007284 Kcnip4 (ENSMAUG00000020538) 5730480H06Rik (ENSMAUG00000000592) Slit2 (ENSMAUG00000011068) ENSMAUG00000019848 Ncapg (ENSMAUG00000007532) Fam184b (ENSMAUG00000021123) ENSMAUG00000008581 Lap3 (ENSMAUG00000014239) ENSMAUG00000013013 #22 Ldb2 (ENSMAUG00000019898) Tapt1 (ENSMAUG00000020047) Prom1 (ENSMAUG00000021517) ENSMAUG00000008674 Fgfbp1 (ENSMAUG00000021288) Cd38 (ENSMAUG00000010213) Bst1 (ENSMAUG00000009435) Fbxl5 (ENSMAUG00000021433) Cc2d2a (ENSMAUG00000009103) C1qtnf7 (ENSMAUG00000014427) Cpeb2 (ENSMAUG00000012556) Bod1l (ENSMAUG00000005686) Nkx3-2 (ENSMAUG00000021195) Rab28 (ENSMAUG00000008404) Hs3st1 (ENSMAUG00000010930) Chinese hamster chok1gshd MODERN SPECIES 195 1700021F07Rik (ENSCGRG00001017573) Pmepa1 (ENSCGRG00001016444) Zbp1 (ENSCGRG00001015544) #7 Pck1 (ENSCGRG00001014463) #8 ENSCGRG00001013637 #9 Rbm38 (ENSCGRG00001012928) #11 Rae1 (ENSCGRG00001012313) #12 Spo11 (ENSCGRG00001009129) #13 Bmp7 (ENSCGRG00001005573) #14 Tfap2c (ENSCGRG00001000794) #15 Fam209 (ENSCGRG00001024477) #16 Gcnt7 (ENSCGRG00001024252) #18 Rtf2 (ENSCGRG00001024046) #19 Cass4 (ENSCGRG00001022964) #20 Cstf1 (ENSCGRG00001021492) #21 Aurka (ENSCGRG00001014225) #22 Fam210b (ENSCGRG00001013313) #23 Mc3r (ENSCGRG00001015997) #24 Cbln4 (ENSCGRG00001012538) #25 Dok5 (ENSCGRG00001011991) #26 Pfdn4 (ENSCGRG00001010542) #27 Cyp24a1 (ENSCGRG00001010160) #28 Bcas1 (ENSCGRG00001007157) #29 Zfp217 (ENSCGRG00001002600) #30 ENSCGRG00001007530 Tshz2 (ENSCGRG00001000496) #31 ENSCGRG00001015533 Zfp64 (ENSCGRG00001020443) #32 Sall4 (ENSCGRG00001019569) #33 Atp9a (ENSCGRG00001017172) #34 Nfatc2 (ENSCGRG00001012491) #35 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Prairie vole MODERN SPECIES 357 Pmepa1 (ENSMOCG00000012737) Zbp1 (ENSMOCG00000019061) #7 Pck1 (ENSMOCG00000022228) #8 Ctcfl (ENSMOCG00000005492) #9 Rbm38 (ENSMOCG00000008715) #11 Rae1 (ENSMOCG00000009926) #12 Spo11 (ENSMOCG00000021312) #13 Bmp7 (ENSMOCG00000016476) #14 Tfap2c (ENSMOCG00000001600) #15 ENSMOCG00000000227 Fam209 (ENSMOCG00000021570) #16 Rtf2 (ENSMOCG00000021800) #19 Gcnt7 (ENSMOCG00000002404) #18 Cass4 (ENSMOCG00000002673) #20 Cstf1 (ENSMOCG00000022740) #21 Aurka (ENSMOCG00000005866) #22 Fam210b (ENSMOCG00000012454) #23 Mc3r (ENSMOCG00000008736) #24 Cbln4 (ENSMOCG00000002519) #25 Dok5 (ENSMOCG00000006196) #26 ENSMOCG00000013934 ENSMOCG00000000248 Cyp24a1 (ENSMOCG00000016929) #28 Bcas1 (ENSMOCG00000004294) #29 Zfp217 (ENSMOCG00000018704) #30 ENSMOCG00000013704 #31 Zfp64 (ENSMOCG00000004895) #32 Sall4 (ENSMOCG00000018245) #33 Atp9a (ENSMOCG00000016994) #34 Nfatc2 (ENSMOCG00000000259) #35 Kcng1 (ENSMOCG00000009238) #36 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 17 Pmepa1 (ENSPEMG00000017336) Zbp1 (ENSPEMG00000016060) #7 Pck1 (ENSPEMG00000020073) #8 Ctcfl (ENSPEMG00000019496) #9 Rbm38 (ENSPEMG00000029093) #11 Rae1 (ENSPEMG00000020004) #12 Spo11 (ENSPEMG00000019552) #13 Bmp7 (ENSPEMG00000019995) #14 Tfap2c (ENSPEMG00000016187) #15 Fam209 (ENSPEMG00000019342) #16 Gcnt7 (ENSPEMG00000019321) #18 Rtf2 (ENSPEMG00000019757) #19 Cass4 (ENSPEMG00000019504) #20 Cstf1 (ENSPEMG00000019660) #21 ENSPEMG00000027444 #22 ENSPEMG00000020059 #22 Fam210b (ENSPEMG00000025841) #23 Mc3r (ENSPEMG00000012765) #24 Cbln4 (ENSPEMG00000030725) #25 ENSPEMG00000027974 ENSPEMG00000030716 Dok5 (ENSPEMG00000022784) #26 Pfdn4 (ENSPEMG00000022289) #27 Cyp24a1 (ENSPEMG00000014776) #28 Bcas1 (ENSPEMG00000000354) #29 Zfp217 (ENSPEMG00000011097) #30 ENSPEMG00000029761 Tshz2 (ENSPEMG00000029085) #31 ENSPEMG00000014233 Zfp64 (ENSPEMG00000014980) #32 Sall4 (ENSPEMG00000022706) #33 Northern American deer mouse MODERN SPECIES 17 1700021F07Rik (ENSPEMG00000018608) Pmepa1 (ENSPEMG00000017336) Zbp1 (ENSPEMG00000016060) #7 Pck1 (ENSPEMG00000020073) #8 Ctcfl (ENSPEMG00000019496) #9 Rbm38 (ENSPEMG00000029093) #11 Rae1 (ENSPEMG00000020004) #12 Spo11 (ENSPEMG00000019552) #13 Bmp7 (ENSPEMG00000019995) #14 Tfap2c (ENSPEMG00000016187) #15 Fam209 (ENSPEMG00000019342) #16 Gcnt7 (ENSPEMG00000019321) #18 Rtf2 (ENSPEMG00000019757) #19 Cass4 (ENSPEMG00000019504) #20 Cstf1 (ENSPEMG00000019660) #21 ENSPEMG00000027444 #22 ENSPEMG00000020059 #22 Fam210b (ENSPEMG00000025841) #23 Mc3r (ENSPEMG00000012765) #24 Cbln4 (ENSPEMG00000030725) #25 ENSPEMG00000027974 ENSPEMG00000030716 Dok5 (ENSPEMG00000022784) #26 Pfdn4 (ENSPEMG00000022289) #27 Cyp24a1 (ENSPEMG00000014776) #28 Bcas1 (ENSPEMG00000000354) #29 Zfp217 (ENSPEMG00000011097) #30 ENSPEMG00000029761 Tshz2 (ENSPEMG00000029085) #31 ENSPEMG00000014233 Zfp64 (ENSPEMG00000014980) #32 Murinae ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Mus ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT01090000262946 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Mus_A ANCESTRAL SPECIES ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT01090000262946 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Mus_C ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT01090000262956 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2975 Serpinb6d (ENSMSIG00000003590) Serpinb6e (ENSMSIG00000003547) Serpinb6c (ENSMSIG00000003508) Serpinb6a (ENSMSIG00000003400) Nqo2 (ENSMSIG00000003346) Ripk1 (ENSMSIG00000003307) Bphl (ENSMSIG00000003262) Tubb2a (ENSMSIG00000003218) Psmg4 (ENSMSIG00000003186) Slc22a23 (ENSMSIG00000003104) Pxdc1 (ENSMSIG00000003089) Fam50b (ENSMSIG00000003082) ENSMSIG00000003077 #22 Prpf4b (ENSMSIG00000003035) Fam217a (ENSMSIG00000002942) Tex56 (ENSMSIG00000002912) ENSMSIG00000002713 Steppe mouse MODERN SPECIES 3237 1700021F07Rik (ENSMSIG00000026800) Pmepa1 (ENSMSIG00000026776) Zbp1 (ENSMSIG00000026758) #7 Pck1 (ENSMSIG00000026751) #8 Ctcfl (ENSMSIG00000026727) #9 Rbm38 (ENSMSIG00000026715) #11 Rae1 (ENSMSIG00000026688) #12 Spo11 (ENSMSIG00000026627) #13 Bmp7 (ENSMSIG00000026606) #14 Tfap2c (ENSMSIG00000026572) #15 Fam209 (ENSMSIG00000026567) #16 Gcnt7 (ENSMSIG00000026556) #18 Rtf2 (ENSMSIG00000026543) #19 Cass4 (ENSMSIG00000026462) #20 Cstf1 (ENSMSIG00000026444) #21 ENSMSIG00000026412 #22 Fam210b (ENSMSIG00000026403) #23 Mc3r (ENSMSIG00000026397) #24 spretus MODERN SPECIES 11 1700021F07Rik (MGP_SPRETEiJ_G0025670) Pmepa1 (MGP_SPRETEiJ_G0025669) Zbp1 (MGP_SPRETEiJ_G0025668) #7 Pck1 (MGP_SPRETEiJ_G0025667) #8 Ctcfl (MGP_SPRETEiJ_G0025666) #9 Rbm38 (MGP_SPRETEiJ_G0025665) #11 Rae1 (MGP_SPRETEiJ_G0025664) #12 Spo11 (MGP_SPRETEiJ_G0025663) #13 Bmp7 (MGP_SPRETEiJ_G0025662) #14 Tfap2c (MGP_SPRETEiJ_G0025661) #15 Fam209 (MGP_SPRETEiJ_G0025660) #16 Gcnt7 (MGP_SPRETEiJ_G0025659) #18 Rtf2 (MGP_SPRETEiJ_G0025658) #19 Cass4 (MGP_SPRETEiJ_G0025657) #20 Cstf1 (MGP_SPRETEiJ_G0025656) #21 Aurka (MGP_SPRETEiJ_G0025655) #22 Fam210b (MGP_SPRETEiJ_G0025654) #23 Mc3r (MGP_SPRETEiJ_G0025653) #24 Cbln4 (MGP_SPRETEiJ_G0025652) #25 Dok5 (MGP_SPRETEiJ_G0025651) #26 MGP_SPRETEiJ_G0025650 Pfdn4 (MGP_SPRETEiJ_G0025649) #27 Cyp24a1 (MGP_SPRETEiJ_G0025648) #28 Bcas1 (MGP_SPRETEiJ_G0025647) #29 Zfp217 (MGP_SPRETEiJ_G0025646) #30 Tshz2 (MGP_SPRETEiJ_G0025645) #31 Zfp64 (MGP_SPRETEiJ_G0025644) #32 Sall4 (MGP_SPRETEiJ_G0025643) #33 Atp9a (MGP_SPRETEiJ_G0025642) #34 Nfatc2 (MGP_SPRETEiJ_G0025641) #35 Kcng1 (MGP_SPRETEiJ_G0025640) #36 Mouse MODERN SPECIES 11 1700021F07Rik (ENSMUSG00000027518) Pmepa1 (ENSMUSG00000038400) Zbp1 (ENSMUSG00000027514) #7 Pck1 (ENSMUSG00000027513) #8 Ctcfl (ENSMUSG00000070495) #9 Rbm38 (ENSMUSG00000027510) #11 Rae1 (ENSMUSG00000027509) #12 Spo11 (ENSMUSG00000005883) #13 Bmp7 (ENSMUSG00000008999) #14 Tfap2c (ENSMUSG00000028640) #15 Fam209 (ENSMUSG00000027505) #16 Gcnt7 (ENSMUSG00000074569) #18 Rtf2 (ENSMUSG00000027502) #19 Cass4 (ENSMUSG00000074570) #20 Cstf1 (ENSMUSG00000027498) #21 Aurka (ENSMUSG00000027496) #22 Fam210b (ENSMUSG00000027495) #23 Mc3r (ENSMUSG00000038537) #24 Cbln4 (ENSMUSG00000067578) #25 Dok5 (ENSMUSG00000027560) #26 Pfdn4 (ENSMUSG00000052033) #27 Cyp24a1 (ENSMUSG00000038567) #28 Bcas1 (ENSMUSG00000013523) #29 Zfp217 (ENSMUSG00000052056) #30 Tshz2 (ENSMUSG00000047907) #31 Zfp64 (ENSMUSG00000027551) #32 Sall4 (ENSMUSG00000027547) #33 Atp9a (ENSMUSG00000027546) #34 Nfatc2 (ENSMUSG00000027544) #35 Kcng1 (ENSMUSG00000074575) #36 Mocs3 (ENSMUSG00000074576) #37 Ryukyu mouse MODERN SPECIES 11 1700021F07Rik (MGP_CAROLIEiJ_G0024750) Pmepa1 (MGP_CAROLIEiJ_G0024749) Zbp1 (MGP_CAROLIEiJ_G0024748) #7 Pck1 (MGP_CAROLIEiJ_G0024747) #8 Ctcfl (MGP_CAROLIEiJ_G0024746) #9 Rbm38 (MGP_CAROLIEiJ_G0024745) #11 Rae1 (MGP_CAROLIEiJ_G0024744) #12 Spo11 (MGP_CAROLIEiJ_G0024743) #13 Bmp7 (MGP_CAROLIEiJ_G0024742) #14 Tfap2c (MGP_CAROLIEiJ_G0024741) #15 Fam209 (MGP_CAROLIEiJ_G0024740) #16 Gcnt7 (MGP_CAROLIEiJ_G0024739) #18 Rtf2 (MGP_CAROLIEiJ_G0024738) #19 Cass4 (MGP_CAROLIEiJ_G0024737) #20 Cstf1 (MGP_CAROLIEiJ_G0024736) #21 Aurka (MGP_CAROLIEiJ_G0024735) #22 Fam210b (MGP_CAROLIEiJ_G0024734) #23 Mc3r (MGP_CAROLIEiJ_G0024733) #24 Cbln4 (MGP_CAROLIEiJ_G0024732) #25 Dok5 (MGP_CAROLIEiJ_G0024731) #26 MGP_CAROLIEiJ_G0024730 MGP_CAROLIEiJ_G0024729 #27 Cyp24a1 (MGP_CAROLIEiJ_G0024728) #28 Bcas1 (MGP_CAROLIEiJ_G0024727) #29 Zfp217 (MGP_CAROLIEiJ_G0024726) #30 Tshz2 (MGP_CAROLIEiJ_G0024725) #31 Zfp64 (MGP_CAROLIEiJ_G0024724) #32 Sall4 (MGP_CAROLIEiJ_G0024723) #33 Atp9a (MGP_CAROLIEiJ_G0024722) #34 Nfatc2 (MGP_CAROLIEiJ_G0024721) #35 Kcng1 (MGP_CAROLIEiJ_G0024720) #36 Shrew mouse MODERN SPECIES 16 1700021F07Rik (MGP_PahariEiJ_G0026191) Pmepa1 (MGP_PahariEiJ_G0026190) MGP_PahariEiJ_G0026189 #7 Pck1 (MGP_PahariEiJ_G0026188) #8 Ctcfl (MGP_PahariEiJ_G0026187) #9 Rbm38 (MGP_PahariEiJ_G0026186) #11 Rae1 (MGP_PahariEiJ_G0026185) #12 Spo11 (MGP_PahariEiJ_G0026184) #13 Bmp7 (MGP_PahariEiJ_G0026183) #14 Tfap2c (MGP_PahariEiJ_G0026182) #15 Fam209 (MGP_PahariEiJ_G0026181) #16 Gcnt7 (MGP_PahariEiJ_G0026180) #18 Rtf2 (MGP_PahariEiJ_G0026179) #19 Cass4 (MGP_PahariEiJ_G0026178) #20 Cstf1 (MGP_PahariEiJ_G0026177) #21 Aurka (MGP_PahariEiJ_G0026176) #22 Fam210b (MGP_PahariEiJ_G0026175) #23 Mc3r (MGP_PahariEiJ_G0026174) #24 Cbln4 (MGP_PahariEiJ_G0026173) #25 Dok5 (MGP_PahariEiJ_G0026172) #26 MGP_PahariEiJ_G0026171 Pfdn4 (MGP_PahariEiJ_G0026170) #27 Cyp24a1 (MGP_PahariEiJ_G0026169) #28 Bcas1 (MGP_PahariEiJ_G0026168) #29 Zfp217 (MGP_PahariEiJ_G0026167) #30 Tshz2 (MGP_PahariEiJ_G0026166) #31 Zfp64 (MGP_PahariEiJ_G0026165) #32 Sall4 (MGP_PahariEiJ_G0026164) #33 Atp9a (MGP_PahariEiJ_G0026163) #34 Nfatc2 (MGP_PahariEiJ_G0026162) #35 Kcng1 (MGP_PahariEiJ_G0026161) #36 Rat MODERN SPECIES 13 Pmepa1 (ENSRNOG00000050404) Zbp1 (ENSRNOG00000006314) #7 Pck1 (ENSRNOG00000028616) #8 Ctcfl (ENSRNOG00000028661) #9 Uchl3 (ENSRNOG00000065893) Rbm38 (ENSRNOG00000006420) #11 Rae1 (ENSRNOG00000021295) #12 Spo11 (ENSRNOG00000006732) #13 Bmp7 (ENSRNOG00000053384) #14 Tfap2c (ENSRNOG00000005246) #15 Fam209 (ENSRNOG00000005235) #16 Gcnt7 (ENSRNOG00000063099) #18 Rtfdc1 (ENSRNOG00000005083) #19 Cass4 (ENSRNOG00000021560) #20 Cstf1 (ENSRNOG00000004775) #21 Aurka (ENSRNOG00000004479) #22 Fam210b (ENSRNOG00000004466) #23 Mc3r (ENSRNOG00000004451) #24 Cbln4 (ENSRNOG00000004372) #25 ENSRNOG00000065655 Dok5 (ENSRNOG00000013196) #26 Pfdn4 (ENSRNOG00000050932) #27 Cyp24a1 (ENSRNOG00000013062) #28 ENSRNOG00000064257 ENSRNOG00000063885 Bcas1 (ENSRNOG00000012906) #29 Zfp217 (ENSRNOG00000021787) #30 ENSRNOG00000064332 Tshz2 (ENSRNOG00000048433) #31 ENSRNOG00000067568 Zfp93 (ENSRNOG00000012762) #32 Upper Galilee mountains blind mole rat MODERN SPECIES 460 Pmepa1 (ENSNGAG00000005913) Zbp1 (ENSNGAG00000023407) #7 Pck1 (ENSNGAG00000012480) #8 Ctcfl (ENSNGAG00000001461) #9 ENSNGAG00000012622 ENSNGAG00000014017 #11 Rae1 (ENSNGAG00000016278) #12 Spo11 (ENSNGAG00000018412) #13 Bmp7 (ENSNGAG00000024076) #14 Tfap2c (ENSNGAG00000021153) #15 Fam209 (ENSNGAG00000023427) #16 Rtf2 (ENSNGAG00000023717) #19 Gcnt7 (ENSNGAG00000014678) #18 Cass4 (ENSNGAG00000011741) #20 Cstf1 (ENSNGAG00000020130) #21 Aurka (ENSNGAG00000022340) #22 Fam210b (ENSNGAG00000023184) #23 ENSNGAG00000023736 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 107 Pmepa1 (ENSJJAG00000000478) Pck1 (ENSJJAG00000011814) #8 ENSJJAG00000022019 ENSJJAG00000016299 #11 ENSJJAG00000018364 #12 Bmp7 (ENSJJAG00000019966) #14 ENSJJAG00000007606 #15 Gcnt7 (ENSJJAG00000020200) #18 Cass4 (ENSJJAG00000024186) #20 Cstf1 (ENSJJAG00000016089) #21 ENSJJAG00000020175 #22 Mc3r (ENSJJAG00000002102) #24 ENSJJAG00000017187 Dok5 (ENSJJAG00000020159) #26 Bcas1 (ENSJJAG00000014333) #29 ENSJJAG00000002075 ENSJJAG00000002372 #31 Zfp64 (ENSJJAG00000013954) #32 Sall4 (ENSJJAG00000020688) #33 Atp9a (ENSJJAG00000014602) #34 Nfatc2 (ENSJJAG00000022151) #35 Kcng1 (ENSJJAG00000012496) #36 Mocs3 (ENSJJAG00000001507) #37 Dpm1 (ENSJJAG00000015047) Adnp (ENSJJAG00000022527) Ptpn1 (ENSJJAG00000023377) Lesser Egyptian jerboa MODERN SPECIES 171 Osbpl2 (ENSJJAG00000011104) ENSJJAG00000011363 Lama5 (ENSJJAG00000014033) Rps21 (ENSJJAG00000016454) Cables2 (ENSJJAG00000017409) Gata5 (ENSJJAG00000018164) Slco4a1 (ENSJJAG00000018715) Ntsr1 (ENSJJAG00000019264) Mrgbp (ENSJJAG00000019784) Ogfr (ENSJJAG00000020054) Col9a3 (ENSJJAG00000020792) ENSJJAG00000022001 Dido1 (ENSJJAG00000022740) Gid8 (ENSJJAG00000000120) Slc17a9 (ENSJJAG00000000563) ENSJJAG00000001169 #22 Bhlhe23 (ENSJJAG00000013438) Ythdf1 (ENSJJAG00000013589) Birc7 (ENSJJAG00000014210) Nkain4 (ENSJJAG00000014525) Arfgap1 (ENSJJAG00000015383) ENSJJAG00000016700 Chrna4 (ENSJJAG00000018512) Kcnq2 (ENSJJAG00000019808) Eef1a2 (ENSJJAG00000020185) Ppdpf (ENSJJAG00000020293) Ptk6 (ENSJJAG00000020457) Srms (ENSJJAG00000020649) Fndc11 (ENSJJAG00000021148) Helz2 (ENSJJAG00000021775) Gmeb2 (ENSJJAG00000022801) Kangaroo rat MODERN SPECIES 394 Vapb (ENSDORG00000028488) Rab22a (ENSDORG00000001998) ENSDORG00000005274 1700021F07Rik (ENSDORG00000005273) Pck1 (ENSDORG00000010927) #8 ENSDORG00000024827 Rae1 (ENSDORG00000003758) #12 Spo11 (ENSDORG00000003757) #13 Bmp7 (ENSDORG00000000717) #14 Tfap2c (ENSDORG00000013943) #15 Fam209 (ENSDORG00000010389) #16 Rtf2 (ENSDORG00000028729) #19 Gcnt7 (ENSDORG00000007793) #18 Cass4 (ENSDORG00000007789) #20 Cstf1 (ENSDORG00000008546) #21 Aurka (ENSDORG00000008545) #22 Fam210b (ENSDORG00000008544) #23 Mc3r (ENSDORG00000001167) #24 ENSDORG00000029002 Cbln4 (ENSDORG00000009501) #25 Dok5 (ENSDORG00000007241) #26 ENSDORG00000006644 Cyp24a1 (ENSDORG00000016127) #28 Bcas1 (ENSDORG00000002327) #29 Zfp217 (ENSDORG00000023982) #30 ENSDORG00000027670 ENSDORG00000028111 #31 Zfp64 (ENSDORG00000024389) #32 Sall4 (ENSDORG00000012841) #33 Atp9a (ENSDORG00000008732) #34 Nfatc2 (ENSDORG00000028181) #35 Rodentia_A ANCESTRAL SPECIES 17 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00950000183091.B.a.b ##12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.ac.a #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Hystricomorpha_b ANCESTRAL SPECIES 16 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.ac.a.b #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Degu DUPLICATION Degu MODERN SPECIES 55 ERCC3 (ENSODEG00000005795) MAP3K2 (ENSODEG00000006030) PROC (ENSODEG00000005293) IWS1 (ENSODEG00000006476) MYO7B (ENSODEG00000006919) GPR17 (ENSODEG00000019336) LIMS2 (ENSODEG00000005725) ENSODEG00000019237 WDR33 (ENSODEG00000005785) POLR2D (ENSODEG00000005262) AMMECR1L (ENSODEG00000005128) SAP130 (ENSODEG00000005382) UGGT1 (ENSODEG00000005315) HS6ST1 (ENSODEG00000006959) ENSODEG00000006817 ENSODEG00000006597 #22 ENSODEG00000006371 Degu MODERN SPECIES 118 PMEPA1 (ENSODEG00000007664) PCK1 (ENSODEG00000007233) #8 RBM38 (ENSODEG00000007980) #11 ENSODEG00000005687 #12 SPO11 (ENSODEG00000006573) #13 BMP7 (ENSODEG00000005399) #14 ENSODEG00000005762 #15 ENSODEG00000006029 #16 RTF2 (ENSODEG00000005634) #19 GCNT7 (ENSODEG00000006051) #18 CASS4 (ENSODEG00000006198) #20 ENSODEG00000019482 ENSODEG00000007572 #22 FAM210B (ENSODEG00000005961) #23 MC3R (ENSODEG00000019495) #24 ENSODEG00000007202 CBLN4 (ENSODEG00000008098) #25 DOK5 (ENSODEG00000009072) #26 ENSODEG00000005992 #27 CYP24A1 (ENSODEG00000005827) #28 ENSODEG00000006282 ZNF217 (ENSODEG00000006753) #30 ENSODEG00000019595 ENSODEG00000019550 #31 ZFP64 (ENSODEG00000005735) #32 ENSODEG00000006564 ENSODEG00000006762 #33 ATP9A (ENSODEG00000006908) #34 Long-tailed chinchilla MODERN SPECIES 152 PMEPA1 (ENSCLAG00000010850) ZBP1 (ENSCLAG00000012154) #7 PCK1 (ENSCLAG00000008119) #8 CTCFL (ENSCLAG00000004596) #9 RBM38 (ENSCLAG00000005906) #11 RAE1 (ENSCLAG00000006500) #12 SPO11 (ENSCLAG00000008712) #13 BMP7 (ENSCLAG00000006692) #14 ENSCLAG00000006921 TFAP2C (ENSCLAG00000008347) #15 ENSCLAG00000005877 #16 RTF2 (ENSCLAG00000005946) #19 GCNT7 (ENSCLAG00000006522) #18 CASS4 (ENSCLAG00000005692) #20 CSTF1 (ENSCLAG00000006676) #21 AURKA (ENSCLAG00000009511) #22 FAM210B (ENSCLAG00000005865) #23 MC3R (ENSCLAG00000017777) #24 CBLN4 (ENSCLAG00000006156) #25 DOK5 (ENSCLAG00000009152) #26 ENSCLAG00000009443 #27 CYP24A1 (ENSCLAG00000006942) #28 BCAS1 (ENSCLAG00000006299) #29 ENSCLAG00000006928 #30 ENSCLAG00000017696 TSHZ2 (ENSCLAG00000009630) #31 ZFP64 (ENSCLAG00000008329) #32 SALL4 (ENSCLAG00000010479) #33 ATP9A (ENSCLAG00000010633) #34 NFATC2 (ENSCLAG00000006467) #35 KCNG1 (ENSCLAG00000006678) #36 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 96 PCK1 (ENSCPOG00000006584) #8 ENSCPOG00000006577 #9 RBM38 (ENSCPOG00000012781) #11 RAE1 (ENSCPOG00000008932) #12 SPO11 (ENSCPOG00000011677) #13 BMP7 (ENSCPOG00000035536) #14 TFAP2C (ENSCPOG00000023253) #15 RTF2 (ENSCPOG00000030139) #19 ENSCPOG00000024456 #16 GCNT7 (ENSCPOG00000035093) #18 CASS4 (ENSCPOG00000026525) #20 CSTF1 (ENSCPOG00000004957) #21 ENSCPOG00000006633 #22 FAM210B (ENSCPOG00000006630) #23 MC3R (ENSCPOG00000024876) #24 CBLN4 (ENSCPOG00000011681) #25 ENSCPOG00000010289 DOK5 (ENSCPOG00000012780) #26 ENSCPOG00000032848 #27 CYP24A1 (ENSCPOG00000010077) #28 BCAS1 (ENSCPOG00000009194) #29 ZNF217 (ENSCPOG00000027399) #30 ENSCPOG00000038107 TSHZ2 (ENSCPOG00000002986) #31 ZFP64 (ENSCPOG00000025271) #32 ENSCPOG00000036300 #33 ENSCPOG00000038489 #33 ATP9A (ENSCPOG00000012747) #34 Guinea pig MODERN SPECIES 71 ENSCPOG00000040736 ENSCPOG00000038759 ENSCPOG00000037814 ENSCPOG00000030448 ENSCPOG00000024485 ENSCPOG00000011144 ENSCPOG00000031130 ENSCPOG00000030723 ENSCPOG00000020404 ENSCPOG00000039008 ENSCPOG00000004045 ENSCPOG00000024827 ENSCPOG00000038869 ENSCPOG00000036058 ENSCPOG00000011962 ENSCPOG00000021609 #22 ENSCPOG00000025297 ENSCPOG00000011107 ENSCPOG00000021398 ENSCPOG00000030442 ENSCPOG00000033629 ENSCPOG00000026243 ENSCPOG00000040701 ENSCPOG00000015632 ENSCPOG00000006829 ENSCPOG00000030324 ENSCPOG00000027035 ENSCPOG00000032059 ENSCPOG00000035512 ENSCPOG00000033351 ENSCPOG00000034510 Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000041408 ZNF512B (ENSHGLG00000014817) SAMD10 (ENSHGLG00000007557) PRPF6 (ENSHGLG00000009222) SOX18 (ENSHGLG00000041364) TCEA2 (ENSHGLG00000006061) RGS19 (ENSHGLG00000043898) LKAAEAR1 (ENSHGLG00000038808) OPRL1 (ENSHGLG00000010426) NPBWR2 (ENSHGLG00000021250) ENSHGLG00000019065 ENSHGLG00000007491 ENSHGLG00000049141 ENSHGLG00000016990 #20 CSTF1 (ENSHGLG00000036531) #21 AURKA (ENSHGLG00000018440) #22 FAM210B (ENSHGLG00000037066) #23 ENSHGLG00000038187 #24 ENSHGLG00000003479 ENSHGLG00000015306 ENSHGLG00000014810 ENSHGLG00000014853 #25 ENSHGLG00000042983 ENSHGLG00000014904 DOK5 (ENSHGLG00000043654) #26 ENSHGLG00000034941 #27 ENSHGLG00000049516 #29 ENSHGLG00000015145 #29 ENSHGLG00000048236 ENSHGLG00000050175 ENSHGLG00000049099 #31 Sciuridae ANCESTRAL SPECIES 13 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Marmotini_b ANCESTRAL SPECIES 29 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 Squirrel DUPLICATION Squirrel MODERN SPECIES 76 MLIP (ENSSTOG00000021067) TINAG (ENSSTOG00000011224) FAM83B (ENSSTOG00000004736) HCRTR2 (ENSSTOG00000006839) GFRAL (ENSSTOG00000006853) HMGCLL1 (ENSSTOG00000003393) BMP5 (ENSSTOG00000002425) COL21A1 (ENSSTOG00000019807) DST (ENSSTOG00000004148) BEND6 (ENSSTOG00000024640) KIAA1586 (ENSSTOG00000025191) ENSSTOG00000032091 BAG2 (ENSSTOG00000010958) RAB23 (ENSSTOG00000010962) PRIM2 (ENSSTOG00000024347) ENSSTOG00000030615 #22 ENSSTOG00000009838 KHDRBS2 (ENSSTOG00000011529) LGSN (ENSSTOG00000015471) ENSSTOG00000032419 ENSSTOG00000030321 PHF3 (ENSSTOG00000025998) Squirrel MODERN SPECIES 474 TFAP2C (ENSSTOG00000014299) #15 ENSSTOG00000021790 #16 GCNT7 (ENSSTOG00000012001) #18 RTF2 (ENSSTOG00000020726) #19 CASS4 (ENSSTOG00000011983) #20 CSTF1 (ENSSTOG00000021271) #21 ENSSTOG00000011958 #22 FAM210B (ENSSTOG00000011956) #23 MC3R (ENSSTOG00000022025) #24 Arctic ground squirrel MODERN SPECIES 342 C20orf85 (ENSUPAG00010004748) PMEPA1 (ENSUPAG00010004754) ZBP1 (ENSUPAG00010004758) #7 PCK1 (ENSUPAG00010004761) #8 CTCFL (ENSUPAG00010004786) #9 RBM38 (ENSUPAG00010005035) #11 RAE1 (ENSUPAG00010005042) #12 SPO11 (ENSUPAG00010005062) #13 BMP7 (ENSUPAG00010005102) #14 TFAP2C (ENSUPAG00010005104) #15 RTF2 (ENSUPAG00010005110) #19 GCNT7 (ENSUPAG00010005117) #18 CASS4 (ENSUPAG00010005120) #20 CSTF1 (ENSUPAG00010005153) #21 AURKA (ENSUPAG00010005160) #22 FAM210B (ENSUPAG00010005166) #23 MC3R (ENSUPAG00010005175) #24 CBLN4 (ENSUPAG00010005179) #25 Alpin marmot MODERN SPECIES C20orf85 (ENSMMMG00000008838) PMEPA1 (ENSMMMG00000008827) ZBP1 (ENSMMMG00000008783) #7 PCK1 (ENSMMMG00000008769) #8 ENSMMMG00000008738 #9 RBM38 (ENSMMMG00000008726) #11 RAE1 (ENSMMMG00000008713) #12 SPO11 (ENSMMMG00000008700) #13 BMP7 (ENSMMMG00000008665) #14 TFAP2C (ENSMMMG00000008643) #15 ENSMMMG00000008638 #16 GCNT7 (ENSMMMG00000008630) #18 RTF2 (ENSMMMG00000008617) #19 CASS4 (ENSMMMG00000008599) #20 CSTF1 (ENSMMMG00000008566) #21 AURKA (ENSMMMG00000008526) #22 FAM210B (ENSMMMG00000008521) #23 MC3R (ENSMMMG00000008520) #24 CBLN4 (ENSMMMG00000008501) #25 DOK5 (ENSMMMG00000008468) #26 PFDN4 (ENSMMMG00000008431) #27 CYP24A1 (ENSMMMG00000008409) #28 BCAS1 (ENSMMMG00000008267) #29 ZNF217 (ENSMMMG00000008233) #30 ENSMMMG00000008228 TSHZ2 (ENSMMMG00000008206) #31 ZFP64 (ENSMMMG00000008125) #32 SALL4 (ENSMMMG00000008074) #33 ATP9A (ENSMMMG00000007891) #34 ENSMMMG00000007852 #35 KCNG1 (ENSMMMG00000007813) #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 15 ZNF131 (ENSSVLG00005011245) NIM1K (ENSSVLG00005011195) ENSSVLG00005011087 CCL28 (ENSSVLG00005010999) TMEM267 (ENSSVLG00005010958) C5orf34 (ENSSVLG00005010862) ENSSVLG00005010623 NNT (ENSSVLG00005010535) FGF10 (ENSSVLG00005010487) MRPS30 (ENSSVLG00005010453) HCN1 (ENSSVLG00005010333) ENSSVLG00005010286 EMB (ENSSVLG00005010153) PARP8 (ENSSVLG00005009527) ISL1 (ENSSVLG00005009398) ENSSVLG00005009370 #22 ENSSVLG00005009354 PELO (ENSSVLG00005009325) ITGA1 (ENSSVLG00005009298) ITGA2 (ENSSVLG00005009124) MOCS2 (ENSSVLG00005009062) FST (ENSSVLG00005008975) ENSSVLG00005008918 ENSSVLG00005008898 ARL15 (ENSSVLG00005008865) HSPB3 (ENSSVLG00005008839) ENSSVLG00005008821 ENSSVLG00005008805 ESM1 (ENSSVLG00005008786) GZMK (ENSSVLG00005008745) GZMA (ENSSVLG00005008704) Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005006905 ENSSVLG00005006876 ENSSVLG00005006819 ENSSVLG00005006785 ENSSVLG00005006757 ENSSVLG00005006676 ILK (ENSSVLG00005006591) ENSSVLG00005006530 TPP1 (ENSSVLG00005006235) DCHS1 (ENSSVLG00005006133) ENSSVLG00005006101 ENSSVLG00005006080 ENSSVLG00005006064 ENSSVLG00005006043 ENSSVLG00005006008 ENSSVLG00005005978 #22 ENSSVLG00005005953 ENSSVLG00005005924 ENSSVLG00005005882 ENSSVLG00005005850 ENSSVLG00005005822 ENSSVLG00005005794 ENSSVLG00005005784 ENSSVLG00005005774 OR6A2 (ENSSVLG00005005765) ENSSVLG00005005753 ENSSVLG00005005728 OR10A4 (ENSSVLG00005005708) OR2D2 (ENSSVLG00005005688) ZNF215 (ENSSVLG00005005660) ZNF214 (ENSSVLG00005005631) Eurasian red squirrel MODERN SPECIES 11 C20orf85 (ENSSVLG00005001802) PMEPA1 (ENSSVLG00005001767) ENSSVLG00005001739 #7 PCK1 (ENSSVLG00005001714) #8 CTCFL (ENSSVLG00005001655) #9 RBM38 (ENSSVLG00005001602) #11 RAE1 (ENSSVLG00005001577) #12 SPO11 (ENSSVLG00005001490) #13 BMP7 (ENSSVLG00005001445) #14 ENSSVLG00005001414 #15 ENSSVLG00005001400 #16 GCNT7 (ENSSVLG00005001383) #18 RTF2 (ENSSVLG00005001366) #19 CASS4 (ENSSVLG00005001328) #20 CSTF1 (ENSSVLG00005001285) #21 ENSSVLG00005001248 #22 FAM210B (ENSSVLG00005001217) #23 MC3R (ENSSVLG00005001203) #24 ENSSVLG00005001189 ENSSVLG00005001173 CBLN4 (ENSSVLG00005001167) #25 DOK5 (ENSSVLG00005001133) #26 PFDN4 (ENSSVLG00005001111) #27 CYP24A1 (ENSSVLG00005001045) #28 BCAS1 (ENSSVLG00005000986) #29 ZNF217 (ENSSVLG00005000945) #30 ENSSVLG00005000930 ENSSVLG00005000915 TSHZ2 (ENSSVLG00005000893) #31 ZFP64 (ENSSVLG00005000833) #32 ENSSVLG00005000761 Lagomorpha ANCESTRAL SPECIES 158 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000169372 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 Rabbit MODERN SPECIES 445 TFAP2C (ENSOCUG00000010996) #15 RTF2 (ENSOCUG00000017902) #19 GCNT7 (ENSOCUG00000017904) #18 CASS4 (ENSOCUG00000017901) #20 ENSOCUG00000035020 AURKA (ENSOCUG00000017898) #22 ENSOCUG00000017897 #23 MC3R (ENSOCUG00000010002) #24 CBLN4 (ENSOCUG00000000072) #25 DOK5 (ENSOCUG00000009223) #26 ENSOCUG00000025205 ENSOCUG00000004940 #27 CYP24A1 (ENSOCUG00000004935) #28 ENSOCUG00000033518 BCAS1 (ENSOCUG00000004927) #29 ZNF217 (ENSOCUG00000011363) #30 ENSOCUG00000033970 TSHZ2 (ENSOCUG00000002587) #31 ENSOCUG00000029581 #32 ENSOCUG00000032290 #32 SALL4 (ENSOCUG00000011797) #33 Pika MODERN SPECIES 5082 ENSOPRG00000008678 #16 RTF2 (ENSOPRG00000008658) #19 CASS4 (ENSOPRG00000008646) #20 CSTF1 (ENSOPRG00000008635) #21 ENSOPRG00000008620 #22 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Eulipotyphla ANCESTRAL SPECIES 1985 ENSGT00940000154900 #22 ENSGT00940000156134 #23 Hedgehog MODERN SPECIES 2355 AURKA (ENSEEUG00000002801) #22 FAM210B (ENSEEUG00000002797) #23 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Suina ANCESTRAL SPECIES 9 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Pig DUPLICATION Pig MODERN SPECIES 8 PMEPA1 (ENSSSCG00000034259) ZBP1 (ENSSSCG00000007508) #7 PCK1 (ENSSSCG00000007507) #8 CTCFL (ENSSSCG00000007505) #9 RBM38 (ENSSSCG00000007504) #11 RAE1 (ENSSSCG00000007503) #12 SPO11 (ENSSSCG00000007502) #13 BMP7 (ENSSSCG00000007501) #14 ENSSSCG00000007500 TFAP2C (ENSSSCG00000007499) #15 FAM209B (ENSSSCG00000007498) #16 GCNT7 (ENSSSCG00000007497) #18 RTF2 (ENSSSCG00000007496) #19 CASS4 (ENSSSCG00000007495) #20 CSTF1 (ENSSSCG00000007494) #21 ENSSSCG00000007493 #22 FAM210B (ENSSSCG00000007492) #23 MC3R (ENSSSCG00000007491) #24 CBLN4 (ENSSSCG00000007490) #25 ENSSSCG00000047911 ENSSSCG00000047657 ENSSSCG00000041198 ENSSSCG00000030971 DOK5 (ENSSSCG00000007488) #26 PFDN4 (ENSSSCG00000007487) #27 CYP24A1 (ENSSSCG00000007486) #28 BCAS1 (ENSSSCG00000007485) #29 ZNF217 (ENSSSCG00000007484) #30 ENSSSCG00000062653 ZFP64 (ENSSSCG00000058830) #32 ENSSSCG00000007481 #32 Pig MODERN SPECIES 15 ENSSSCG00000001790 TMC3 (ENSSSCG00000001789) STARD5 (ENSSSCG00000001788) IL16 (ENSSSCG00000001787) CFAP161 (ENSSSCG00000001786) TLNRD1 (ENSSSCG00000037209) MESD (ENSSSCG00000021587) CEMIP (ENSSSCG00000038929) ABHD17C (ENSSSCG00000001782) ARNT2 (ENSSSCG00000040288) CTXND1 (ENSSSCG00000056088) FAH (ENSSSCG00000001780) ZFAND6 (ENSSSCG00000001779) BCL2A1 (ENSSSCG00000040010) MTHFS (ENSSSCG00000038708) ENSSSCG00000001776 #22 MINAR1 (ENSSSCG00000001775) TMED3 (ENSSSCG00000001773) ANKRD34C (ENSSSCG00000032430) RASGRF1 (ENSSSCG00000001771) CTSH (ENSSSCG00000001770) MORF4L1 (ENSSSCG00000001769) ENSSSCG00000041217 ADAMTS7 (ENSSSCG00000001765) TBC1D2B (ENSSSCG00000027477) SH2D7 (ENSSSCG00000001764) CIB2 (ENSSSCG00000001762) IDH3A (ENSSSCG00000032498) ACSBG1 (ENSSSCG00000001760) DNAJA4 (ENSSSCG00000037646) SKIC8 (ENSSSCG00000001757) Chacoan peccary MODERN SPECIES 801 C20orf85 (ENSCWAG00000012049) PMEPA1 (ENSCWAG00000012098) ZBP1 (ENSCWAG00000012192) #7 PCK1 (ENSCWAG00000012380) #8 CTCFL (ENSCWAG00000012475) #9 RBM38 (ENSCWAG00000013092) #11 RAE1 (ENSCWAG00000013163) #12 SPO11 (ENSCWAG00000013226) #13 BMP7 (ENSCWAG00000013637) #14 TFAP2C (ENSCWAG00000013788) #15 ENSCWAG00000013848 #16 RTF2 (ENSCWAG00000013880) #19 GCNT7 (ENSCWAG00000013939) #18 CASS4 (ENSCWAG00000003694) #20 CSTF1 (ENSCWAG00000003789) #21 AURKA (ENSCWAG00000003823) #22 FAM210B (ENSCWAG00000003878) #23 MC3R (ENSCWAG00000003893) #24 ENSCWAG00000003907 CBLN4 (ENSCWAG00000003931) #25 ENSCWAG00000003959 DOK5 (ENSCWAG00000003971) #26 ENSCWAG00000004002 #27 CYP24A1 (ENSCWAG00000004053) #28 BCAS1 (ENSCWAG00000004272) #29 ZNF217 (ENSCWAG00000004422) #30 ENSCWAG00000004441 TSHZ2 (ENSCWAG00000004473) #31 ZFP64 (ENSCWAG00000004512) #32 ENSCWAG00000004683 ENSCWAG00000004698 Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Cetacea ANCESTRAL SPECIES 3 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000153664.A.a.m.b.b ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000153664.A.a.m.b.b ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.g #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000153664.A.a.m.b.b ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.g #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000153664.A.a.m.b.b ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.g #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000153664.A.a.m.b.b ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.g #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Narwhal MODERN SPECIES 299 C20orf85 (ENSMMNG00015004638) PMEPA1 (ENSMMNG00015004645) ENSMMNG00015004653 #7 PCK1 (ENSMMNG00015004656) #8 ENSMMNG00015004668 #9 RBM38 (ENSMMNG00015004680) #11 RAE1 (ENSMMNG00015004687) #12 SPO11 (ENSMMNG00015004707) #13 BMP7 (ENSMMNG00015004731) #14 TFAP2C (ENSMMNG00015004743) #15 ENSMMNG00015004746 #16 RTF2 (ENSMMNG00015004751) #19 GCNT7 (ENSMMNG00015000042) #18 CASS4 (ENSMMNG00015000069) #20 CSTF1 (ENSMMNG00015000105) #21 AURKA (ENSMMNG00015000130) #22 FAM210B (ENSMMNG00015000159) #23 MC3R (ENSMMNG00015000177) #24 CBLN4 (ENSMMNG00015000195) #25 ENSMMNG00015000209 DOK5 (ENSMMNG00015000246) #26 PFDN4 (ENSMMNG00015000280) #27 CYP24A1 (ENSMMNG00015000319) #28 BCAS1 (ENSMMNG00015000370) #29 ENSMMNG00015000402 ZNF217 (ENSMMNG00015000437) #30 ENSMMNG00015000468 TSHZ2 (ENSMMNG00015000487) #31 ZFP64 (ENSMMNG00015000539) #32 ENSMMNG00015000612 #33 ATP9A (ENSMMNG00015000677) #34 Beluga whale MODERN SPECIES 36 C20orf85 (ENSDLEG00000001209) PMEPA1 (ENSDLEG00000001226) ZBP1 (ENSDLEG00000001241) #7 PCK1 (ENSDLEG00000001260) #8 CTCFL (ENSDLEG00000001310) #9 RBM38 (ENSDLEG00000001441) #11 RAE1 (ENSDLEG00000001455) #12 SPO11 (ENSDLEG00000001479) #13 BMP7 (ENSDLEG00000001532) #14 TFAP2C (ENSDLEG00000001553) #15 ENSDLEG00000001584 #16 RTFDC1 (ENSDLEG00000001595) #19 GCNT7 (ENSDLEG00000001619) #18 CASS4 (ENSDLEG00000001641) #20 CSTF1 (ENSDLEG00000001658) #21 AURKA (ENSDLEG00000001687) #22 FAM210B (ENSDLEG00000001702) #23 MC3R (ENSDLEG00000001714) #24 CBLN4 (ENSDLEG00000001722) #25 DOK5 (ENSDLEG00000001742) #26 PFDN4 (ENSDLEG00000001762) #27 CYP24A1 (ENSDLEG00000001776) #28 BCAS1 (ENSDLEG00000001828) #29 ENSDLEG00000001927 ZNF217 (ENSDLEG00000001937) #30 ENSDLEG00000001949 TSHZ2 (ENSDLEG00000001964) #31 ZFP64 (ENSDLEG00000001976) #32 SALL4 (ENSDLEG00000001990) #33 ATP9A (ENSDLEG00000002017) #34 NFATC2 (ENSDLEG00000002111) #35 Vaquita MODERN SPECIES 6 ENSPSNG00000018112 C20orf85 (ENSPSNG00000018366) PMEPA1 (ENSPSNG00000018424) ENSPSNG00000018539 #7 PCK1 (ENSPSNG00000018615) #8 ENSPSNG00000018701 #9 RBM38 (ENSPSNG00000018800) #11 RAE1 (ENSPSNG00000018876) #12 SPO11 (ENSPSNG00000018975) #13 BMP7 (ENSPSNG00000019245) #14 TFAP2C (ENSPSNG00000019329) #15 RTF2 (ENSPSNG00000019378) #19 GCNT7 (ENSPSNG00000019434) #18 CASS4 (ENSPSNG00000019490) #20 CSTF1 (ENSPSNG00000019520) #21 AURKA (ENSPSNG00000019542) #22 FAM210B (ENSPSNG00000019586) #23 MC3R (ENSPSNG00000019606) #24 CBLN4 (ENSPSNG00000019654) #25 DOK5 (ENSPSNG00000019697) #26 PFDN4 (ENSPSNG00000019742) #27 CYP24A1 (ENSPSNG00000019798) #28 BCAS1 (ENSPSNG00000019991) #29 ENSPSNG00000020059 ZNF217 (ENSPSNG00000020078) #30 ENSPSNG00000020106 TSHZ2 (ENSPSNG00000020114) #31 ZFP64 (ENSPSNG00000020170) #32 SALL4 (ENSPSNG00000020296) #33 ATP9A (ENSPSNG00000020387) #34 NFATC2 (ENSPSNG00000020496) #35 Dolphin MODERN SPECIES 4729 ENSTTRG00000014876 #16 GCNT7 (ENSTTRG00000014875) #18 RTFDC1 (ENSTTRG00000014873) #19 CSTF1 (ENSTTRG00000014871) #21 AURKA (ENSTTRG00000014869) #22 FAM210B (ENSTTRG00000014867) #23 Sperm whale MODERN SPECIES 5 ANKRD60 (ENSPCTG00005018795) RAB22A (ENSPCTG00005018849) VAPB (ENSPCTG00005018875) APCDD1L (ENSPCTG00005018939) STX16 (ENSPCTG00005019004) NPEPL1 (ENSPCTG00005019263) RAE1 (ENSPCTG00005019375) ##12 SPO11 (ENSPCTG00005019409) #13 BMP7 (ENSPCTG00005019690) #14 TFAP2C (ENSPCTG00005019905) #15 ENSPCTG00005019969 #16 RTF2 (ENSPCTG00005019989) #19 GCNT7 (ENSPCTG00005020022) #18 CASS4 (ENSPCTG00005020081) #20 CSTF1 (ENSPCTG00005020190) #21 AURKA (ENSPCTG00005020213) #22 FAM210B (ENSPCTG00005020243) #23 MC3R (ENSPCTG00005020261) #24 CBLN4 (ENSPCTG00005020287) #25 ENSPCTG00005020310 ENSPCTG00005020331 DOK5 (ENSPCTG00005020398) #26 PFDN4 (ENSPCTG00005020437) #27 CYP24A1 (ENSPCTG00005020488) #28 BCAS1 (ENSPCTG00005020687) #29 ENSPCTG00005020977 ENSPCTG00005020985 ZNF217 (ENSPCTG00005021008) #30 ENSPCTG00005021022 TSHZ2 (ENSPCTG00005021047) #31 ZFP64 (ENSPCTG00005021080) #32 Blue whale MODERN SPECIES 6 C20orf85 (ENSBMSG00010015677) PMEPA1 (ENSBMSG00010015696) ENSBMSG00010015746 #7 PCK1 (ENSBMSG00010015806) #8 CTCFL (ENSBMSG00010015901) #9 RBM38 (ENSBMSG00010016708) #11 RAE1 (ENSBMSG00010016769) #12 SPO11 (ENSBMSG00010016851) #13 BMP7 (ENSBMSG00010017011) #14 TFAP2C (ENSBMSG00010017082) #15 ENSBMSG00010017111 #16 RTF2 (ENSBMSG00010017141) #19 GCNT7 (ENSBMSG00010017169) #18 CASS4 (ENSBMSG00010017207) #20 CSTF1 (ENSBMSG00010017244) #21 AURKA (ENSBMSG00010017273) #22 FAM210B (ENSBMSG00010017312) #23 MC3R (ENSBMSG00010017331) #24 CBLN4 (ENSBMSG00010017348) #25 DOK5 (ENSBMSG00010017385) #26 ENSBMSG00010017414 ENSBMSG00010017440 #27 CYP24A1 (ENSBMSG00010017495) #28 BCAS1 (ENSBMSG00010017677) #29 ENSBMSG00010017734 ZNF217 (ENSBMSG00010017748) #30 ENSBMSG00010017767 TSHZ2 (ENSBMSG00010017799) #31 ENSBMSG00010017820 PNMA5 (ENSBMSG00010017834) ZFP64 (ENSBMSG00010017865) #32 Pecora ANCESTRAL SPECIES 9 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Percora_a ANCESTRAL SPECIES 10 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Bovidae ANCESTRAL SPECIES 10 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Caprinae ANCESTRAL SPECIES 21 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134.m #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a.a ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Rambouillet Sheep MODERN SPECIES 4 RAB22A (ENSOARG00020013056) C20orf85 (ENSOARG00020013218) PMEPA1 (ENSOARG00020013298) ENSOARG00020013373 #7 PCK1 (ENSOARG00020013457) #8 CTCFL (ENSOARG00020013572) #9 RBM38 (ENSOARG00020014327) #11 RAE1 (ENSOARG00020014456) #12 SPO11 (ENSOARG00020014512) #13 BMP7 (ENSOARG00020014945) #14 TFAP2C (ENSOARG00020015147) #15 ENSOARG00020015232 #16 RTF2 (ENSOARG00020015268) #19 GCNT7 (ENSOARG00020015320) #18 CSTF1 (ENSOARG00020015504) #21 AURKA (ENSOARG00020015608) #22 FAM210B (ENSOARG00020015852) #23 MC3R (ENSOARG00020015898) #24 SIRPB2 (ENSOARG00020015924) NSFL1C (ENSOARG00020015987) ENSOARG00020016172 SDCBP2 (ENSOARG00020016367) RAD21L1 (ENSOARG00020016432) C20orf202 (ENSOARG00020016836) TMEM74B (ENSOARG00020016880) PSMF1 (ENSOARG00020016930) RSPO4 (ENSOARG00020017015) ANGPT4 (ENSOARG00020017162) ENSOARG00020017224 FAM110A (ENSOARG00020017237) SLC52A3 (ENSOARG00020017257) Goat MODERN SPECIES 4 C20orf85 (ENSCHIG00000013954) PMEPA1 (ENSCHIG00000019681) ENSCHIG00000006747 #7 PCK1 (ENSCHIG00000004184) #8 CTCFL (ENSCHIG00000012079) #9 RBM38 (ENSCHIG00000002609) #11 RAE1 (ENSCHIG00000021396) #12 SPO11 (ENSCHIG00000024033) #13 BMP7 (ENSCHIG00000009982) #14 TFAP2C (ENSCHIG00000016251) #15 ENSCHIG00000011944 #16 RTF2 (ENSCHIG00000016795) #19 GCNT7 (ENSCHIG00000011787) #18 CASS4 (ENSCHIG00000025456) #20 CSTF1 (ENSCHIG00000024686) #21 AURKA (ENSCHIG00000024453) #22 ENSCHIG00000020130 #23 ENSCHIG00000015868 SIRPB2 (ENSCHIG00000020185) NSFL1C (ENSCHIG00000026320) ENSCHIG00000008981 SDCBP2 (ENSCHIG00000026727) SNPH (ENSCHIG00000022086) RAD21L1 (ENSCHIG00000022078) C20orf202 (ENSCHIG00000022210) TMEM74B (ENSCHIG00000000818) PSMF1 (ENSCHIG00000020929) RSPO4 (ENSCHIG00000015538) ANGPT4 (ENSCHIG00000018246) FAM110A (ENSCHIG00000001856) SLC52A3 (ENSCHIG00000020719) Bovinae ANCESTRAL SPECIES 23 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000015224.c.b.a ENSGT00390000005057.g #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a.c ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Bos ANCESTRAL SPECIES 24 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000015224.c.b.a ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a.c ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Bos_a ANCESTRAL SPECIES 7 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b.d #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000015224.c.b.a ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.b.a.c ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Domestic yak MODERN SPECIES 3 ZBP1 (ENSBGRG00000009247) #7 PCK1 (ENSBGRG00000009353) #8 CTCFL (ENSBGRG00000009589) #9 RBM38 (ENSBGRG00000010003) #11 ENSBGRG00000010143 #12 SPO11 (ENSBGRG00000010307) #13 BMP7 (ENSBGRG00000010612) #14 TFAP2C (ENSBGRG00000010689) #15 ENSBGRG00000010827 ENSBGRG00000010860 #16 RTF2 (ENSBGRG00000010891) #19 GCNT7 (ENSBGRG00000011133) #18 CASS4 (ENSBGRG00000011222) #20 CSTF1 (ENSBGRG00000011331) #21 ENSBGRG00000011378 AURKA (ENSBGRG00000011397) #22 FAM210B (ENSBGRG00000011532) #23 MC3R (ENSBGRG00000011613) #24 SIRPB2 (ENSBGRG00000011673) NSFL1C (ENSBGRG00000011719) ENSBGRG00000012031 SDCBP2 (ENSBGRG00000012247) SNPH (ENSBGRG00000012380) C20orf202 (ENSBGRG00000012779) TMEM74B (ENSBGRG00000012833) PSMF1 (ENSBGRG00000012880) RSPO4 (ENSBGRG00000013102) ANGPT4 (ENSBGRG00000013294) FAM110A (ENSBGRG00000013445) SLC52A3 (ENSBGRG00000013477) SCRT2 (ENSBGRG00000013559) Wild yak MODERN SPECIES 119 C20orf85 (ENSBMUG00000016991) PMEPA1 (ENSBMUG00000016982) ZBP1 (ENSBMUG00000016977) #7 PCK1 (ENSBMUG00000016967) #8 CTCFL (ENSBMUG00000016873) #9 RBM38 (ENSBMUG00000016782) #11 ENSBMUG00000016759 #12 SPO11 (ENSBMUG00000016729) #13 BMP7 (ENSBMUG00000016640) #14 TFAP2C (ENSBMUG00000016627) #15 ENSBMUG00000016603 #16 GCNT7 (ENSBMUG00000016592) #18 RTF2 (ENSBMUG00000016577) #19 CASS4 (ENSBMUG00000016558) #20 CSTF1 (ENSBMUG00000016523) #21 AURKA (ENSBMUG00000016455) #22 FAM210B (ENSBMUG00000016427) #23 MC3R (ENSBMUG00000016410) #24 ENSBMUG00000016366 SIRPB2 (ENSBMUG00000016351) NSFL1C (ENSBMUG00000016322) ENSBMUG00000016263 SDCBP2 (ENSBMUG00000016215) Bos_b ANCESTRAL SPECIES 26 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000015224.c.b.a ENSGT00390000005057.g #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b.e #24 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a ENSGT00940000153311.a.b.a.i.a ENSGT00940000161179 ENSGT00520000055634.b ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00950000183056.B.a Cow MODERN SPECIES 4 PMEPA1 (ENSBTAG00000054628) ZBP1 (ENSBTAG00000012406) #7 PCK1 (ENSBTAG00000001936) #8 CTCFL (ENSBTAG00000013079) #9 RBM38 (ENSBTAG00000008105) #11 RAE1 (ENSBTAG00000010934) #12 SPO11 (ENSBTAG00000044210) #13 BMP7 (ENSBTAG00000015362) #14 TFAP2C (ENSBTAG00000002065) #15 ENSBTAG00000024608 FAM209A (ENSBTAG00000031462) #16 RTF2 (ENSBTAG00000027390) #19 GCNT7 (ENSBTAG00000006243) #18 CASS4 (ENSBTAG00000014555) #20 CSTF1 (ENSBTAG00000006639) #21 AURKA (ENSBTAG00000013009) #22 FAM210B (ENSBTAG00000013007) #23 MC3R (ENSBTAG00000004712) #24 SIRPD (ENSBTAG00000033397) SIRPB2 (ENSBTAG00000006539) NSFL1C (ENSBTAG00000006533) FKBP1A (ENSBTAG00000008303) ENSBTAG00000052136 SDCBP2 (ENSBTAG00000021321) SNPH (ENSBTAG00000048366) RAD21L1 (ENSBTAG00000001376) C13H20orf202 (ENSBTAG00000050105) TMEM74B (ENSBTAG00000018418) PSMF1 (ENSBTAG00000018417) RSPO4 (ENSBTAG00000021885) ANGPT4 (ENSBTAG00000021811) Hybrid Bos Indicus MODERN SPECIES 4 PMEPA1 (ENSBIXG00005022840) ZBP1 (ENSBIXG00005007383) #7 ENSBIXG00005022901 CTCFL (ENSBIXG00005022968) #9 PCK1 (ENSBIXG00005003950) #8 RAE1 (ENSBIXG00005023229) #12 SPO11 (ENSBIXG00005023438) #13 BMP7 (ENSBIXG00005023542) #14 TFAP2C (ENSBIXG00005023582) #15 ENSBIXG00005023622 ENSBIXG00005023633 #16 GCNT7 (ENSBIXG00005004050) #18 RTF2 (ENSBIXG00005023694) #19 CASS4 (ENSBIXG00005023749) #20 CSTF1 (ENSBIXG00005005882) #21 AURKA (ENSBIXG00005023837) #22 FAM210B (ENSBIXG00005023861) #23 MC3R (ENSBIXG00005023881) #24 SIRPB2 (ENSBIXG00005023892) NSFL1C (ENSBIXG00005023940) ENSBIXG00005023953 SDCBP2 (ENSBIXG00005004119) ENSBIXG00005024112 RAD21L1 (ENSBIXG00005024217) C20orf202 (ENSBIXG00005004145) TMEM74B (ENSBIXG00005024275) PSMF1 (ENSBIXG00005024324) RSPO4 (ENSBIXG00005024367) ANGPT4 (ENSBIXG00005024442) FAM110A (ENSBIXG00005024488) SLC52A3 (ENSBIXG00005004191) American bison MODERN SPECIES 3089 PMEPA1 (ENSBBBG00000024661) ENSBBBG00000024674 #7 PCK1 (ENSBBBG00000006468) #8 CTCFL (ENSBBBG00000008049) #9 RBM38 (ENSBBBG00000024899) #11 RAE1 (ENSBBBG00000024949) #12 SPO11 (ENSBBBG00000025046) #13 BMP7 (ENSBBBG00000006644) #14 TFAP2C (ENSBBBG00000007748) #15 ENSBBBG00000025115 ENSBBBG00000025120 #16 GCNT7 (ENSBBBG00000025135) #18 RTF2 (ENSBBBG00000006668) #19 CASS4 (ENSBBBG00000025195) #20 CSTF1 (ENSBBBG00000025215) #21 AURKA (ENSBBBG00000025307) #22 FAM210B (ENSBBBG00000008091) #23 MC3R (ENSBBBG00000025338) #24 SIRPB2 (ENSBBBG00000007856) NSFL1C (ENSBBBG00000025367) ENSBBBG00000025481 SDCBP2 (ENSBBBG00000009625) SNPH (ENSBBBG00000009630) RAD21L1 (ENSBBBG00000009638) C20orf202 (ENSBBBG00000009643) TMEM74B (ENSBBBG00000009647) PSMF1 (ENSBBBG00000001566) RSPO4 (ENSBBBG00000007112) ANGPT4 (ENSBBBG00000009694) FAM110A (ENSBBBG00000001586) SLC52A3 (ENSBBBG00000009701) Siberian musk deer MODERN SPECIES 1193 C20orf85 (ENSMMSG00000021117) PMEPA1 (ENSMMSG00000021093) ENSMMSG00000021009 #7 PCK1 (ENSMMSG00000020967) #8 CTCFL (ENSMMSG00000020529) #9 RBM38 (ENSMMSG00000020472) #11 RAE1 (ENSMMSG00000020424) #12 SPO11 (ENSMMSG00000020191) #13 BMP7 (ENSMMSG00000020121) #14 TFAP2C (ENSMMSG00000020093) #15 ENSMMSG00000020083 #16 GCNT7 (ENSMMSG00000020064) #18 RTF2 (ENSMMSG00000020042) #19 CASS4 (ENSMMSG00000019993) #20 CSTF1 (ENSMMSG00000019970) #21 AURKA (ENSMMSG00000019919) #22 FAM210B (ENSMMSG00000019888) #23 ENSMMSG00000019880 #24 ENSMMSG00000019862 SIRPB2 (ENSMMSG00000019841) NSFL1C (ENSMMSG00000019782) ENSMMSG00000019745 SDCBP2 (ENSMMSG00000019715) RAD21L1 (ENSMMSG00000019560) C20orf202 (ENSMMSG00000019524) TMEM74B (ENSMMSG00000019512) PSMF1 (ENSMMSG00000019483) RSPO4 (ENSMMSG00000019455) ANGPT4 (ENSMMSG00000019383) FAM110A (ENSMMSG00000019364) SLC52A3 (ENSMMSG00000019335) Yarkand deer MODERN SPECIES 15 PMEPA1 (ENSCHYG00000018099) ENSCHYG00000018137 #7 PCK1 (ENSCHYG00000018190) #8 CTCFL (ENSCHYG00000018291) #9 RBM38 (ENSCHYG00000018538) #11 ENSCHYG00000018647 #12 SPO11 (ENSCHYG00000018785) #13 BMP7 (ENSCHYG00000019388) #14 ENSCHYG00000019890 TFAP2C (ENSCHYG00000019937) #15 ENSCHYG00000020096 #16 RTF2 (ENSCHYG00000020116) #19 GCNT7 (ENSCHYG00000020206) #18 CASS4 (ENSCHYG00000020270) #20 CSTF1 (ENSCHYG00000020443) #21 AURKA (ENSCHYG00000020501) #22 ENSCHYG00000020595 #23 MC3R (ENSCHYG00000020674) #24 ENSCHYG00000020710 SIRPB2 (ENSCHYG00000020774) ENSCHYG00000020847 ENSCHYG00000021051 SDCBP2 (ENSCHYG00000021231) SNPH (ENSCHYG00000021365) C20orf202 (ENSCHYG00000021610) TMEM74B (ENSCHYG00000021658) PSMF1 (ENSCHYG00000021704) RSPO4 (ENSCHYG00000021771) ANGPT4 (ENSCHYG00000021825) FAM110A (ENSCHYG00000021925) SLC52A3 (ENSCHYG00000021958) Camelidae ANCESTRAL SPECIES 10 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Alpaca MODERN SPECIES 178 GCNT7 (ENSVPAG00000012140) #18 RTF2 (ENSVPAG00000012138) #19 CASS4 (ENSVPAG00000012136) #20 CSTF1 (ENSVPAG00000012134) #21 ENSVPAG00000012131 #22 MC3R (ENSVPAG00000012130) #24 Arabian camel MODERN SPECIES 10 PMEPA1 (ENSCDRG00005018556) ZBP1 (ENSCDRG00005018520) #7 PCK1 (ENSCDRG00005018483) #8 CTCFL (ENSCDRG00005018103) #9 RBM38 (ENSCDRG00005018053) #11 RAE1 (ENSCDRG00005018020) #12 SPO11 (ENSCDRG00005017688) #13 BMP7 (ENSCDRG00005017580) #14 ENSCDRG00005017550 TFAP2C (ENSCDRG00005017528) #15 ENSCDRG00005017508 #16 GCNT7 (ENSCDRG00005017452) #18 RTF2 (ENSCDRG00005017316) #19 CASS4 (ENSCDRG00005017279) #20 CSTF1 (ENSCDRG00005017255) #21 AURKA (ENSCDRG00005017220) #22 FAM210B (ENSCDRG00005017188) #23 MC3R (ENSCDRG00005017174) #24 CBLN4 (ENSCDRG00005017147) #25 DOK5 (ENSCDRG00005017101) #26 PFDN4 (ENSCDRG00005017062) #27 CYP24A1 (ENSCDRG00005016933) #28 BCAS1 (ENSCDRG00005016699) #29 ZNF217 (ENSCDRG00005016648) #30 ENSCDRG00005016633 TSHZ2 (ENSCDRG00005016617) #31 ENSCDRG00005016576 ZFP64 (ENSCDRG00005016359) #32 SALL4 (ENSCDRG00005016240) #33 ATP9A (ENSCDRG00005015920) #34 NFATC2 (ENSCDRG00005015695) #35 Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Carnivora ANCESTRAL SPECIES 20 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Felidae ANCESTRAL SPECIES 3 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.cb #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000154276.kb ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Panthera ANCESTRAL SPECIES 2 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.cb #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000154276.kb ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.cb #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000154276.kb ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00910000146955 ENSGT00940000156230 #35 leopard MODERN SPECIES 32 TFAP2C (ENSPPRG00000006375) #15 ENSPPRG00000006287 #16 RTF2 (ENSPPRG00000005166) #19 GCNT7 (ENSPPRG00000001763) #18 CASS4 (ENSPPRG00000001534) #20 CSTF1 (ENSPPRG00000000733) #21 AURKA (ENSPPRG00000000440) #22 FAM210B (ENSPPRG00000023782) #23 MC3R (ENSPPRG00000017600) #24 CBLN4 (ENSPPRG00000023868) #25 DOK5 (ENSPPRG00000024034) #26 ENSPPRG00000024512 #27 CYP24A1 (ENSPPRG00000024597) #28 BCAS1 (ENSPPRG00000015142) #29 ZNF217 (ENSPPRG00000014025) #30 TSHZ2 (ENSPPRG00000013365) #31 ZFP64 (ENSPPRG00000012539) #32 ENSPPRG00000010090 #32 ENSPPRG00000009749 SALL4 (ENSPPRG00000008677) #33 ATP9A (ENSPPRG00000008193) #34 ENSPPRG00000017056 lion MODERN SPECIES 3 C20orf85 (ENSPLOG00000011071) PMEPA1 (ENSPLOG00000010999) ENSPLOG00000010977 #7 PCK1 (ENSPLOG00000010911) #8 CTCFL (ENSPLOG00000010795) #9 RBM38 (ENSPLOG00000003968) #11 RAE1 (ENSPLOG00000003947) #12 SPO11 (ENSPLOG00000003903) #13 BMP7 (ENSPLOG00000003845) #14 TFAP2C (ENSPLOG00000003814) #15 ENSPLOG00000003801 #16 GCNT7 (ENSPLOG00000003785) #18 RTF2 (ENSPLOG00000003723) #19 CASS4 (ENSPLOG00000003663) #20 CSTF1 (ENSPLOG00000003647) #21 AURKA (ENSPLOG00000003634) #22 FAM210B (ENSPLOG00000003624) #23 MC3R (ENSPLOG00000003615) #24 CBLN4 (ENSPLOG00000003605) #25 DOK5 (ENSPLOG00000003578) #26 ENSPLOG00000003567 #27 BCAS1 (ENSPLOG00000003532) #29 ZNF217 (ENSPLOG00000003494) #30 TSHZ2 (ENSPLOG00000003471) #31 ZFP64 (ENSPLOG00000003449) #32 ENSPLOG00000003430 #32 ENSPLOG00000003422 SALL4 (ENSPLOG00000003409) #33 ATP9A (ENSPLOG00000003344) #34 NFATC2 (ENSPLOG00000003200) #35 KCNG1 (ENSPLOG00000003153) #36 Tiger MODERN SPECIES 253 ENSPTIG00000009510 C20orf85 (ENSPTIG00000011178) ENSPTIG00000011495 #7 PCK1 (ENSPTIG00000012521) #8 ENSPTIG00000013064 #9 ENSPTIG00000013448 #11 RAE1 (ENSPTIG00000014648) #12 SPO11 (ENSPTIG00000017033) #13 BMP7 (ENSPTIG00000020525) #14 TFAP2C (ENSPTIG00000021497) #15 ENSPTIG00000021739 #16 RTF2 (ENSPTIG00000003720) #19 GCNT7 (ENSPTIG00000007809) #18 CASS4 (ENSPTIG00000009122) #20 CSTF1 (ENSPTIG00000012174) #21 AURKA (ENSPTIG00000012737) #22 FAM210B (ENSPTIG00000015174) #23 MC3R (ENSPTIG00000001341) #24 CBLN4 (ENSPTIG00000017065) #25 DOK5 (ENSPTIG00000017461) #26 ENSPTIG00000018209 #27 CYP24A1 (ENSPTIG00000018918) #28 BCAS1 (ENSPTIG00000020298) #29 ZNF217 (ENSPTIG00000005463) #30 TSHZ2 (ENSPTIG00000007834) #31 ZFP64 (ENSPTIG00000008689) #32 ENSPTIG00000009370 #33 ATP9A (ENSPTIG00000010238) #34 ENSPTIG00000001966 ENSPTIG00000020900 #35 Cat MODERN SPECIES 2 ENSFCAG00000019082 ANKRD60 (ENSFCAG00000041149) CA3H20orf85 (ENSFCAG00000026868) PMEPA1 (ENSFCAG00000025692) ZBP1 (ENSFCAG00000000420) #7 PCK1 (ENSFCAG00000000419) #8 CTCFL (ENSFCAG00000031045) #9 RBM38 (ENSFCAG00000042916) #11 SPO11 (ENSFCAG00000041965) #13 ENSFCAG00000053180 #14 TFAP2C (ENSFCAG00000005551) #15 RTF2 (ENSFCAG00000037890) #19 GCNT7 (ENSFCAG00000005550) #18 CASS4 (ENSFCAG00000005548) #20 CSTF1 (ENSFCAG00000025673) #21 AURKA (ENSFCAG00000024493) #22 FAM210B (ENSFCAG00000044679) #23 MC3R (ENSFCAG00000007053) #24 CBLN4 (ENSFCAG00000042415) #25 DOK5 (ENSFCAG00000007809) #26 PFDN4 (ENSFCAG00000013355) #27 CYP24A1 (ENSFCAG00000002452) #28 BCAS1 (ENSFCAG00000002451) #29 ZNF217 (ENSFCAG00000029845) #30 TSHZ2 (ENSFCAG00000014616) #31 ZFP64 (ENSFCAG00000011815) #32 SALL4 (ENSFCAG00000002822) #33 ENSFCAG00000032676 ATP9A (ENSFCAG00000022069) #34 NFATC2 (ENSFCAG00000000947) #35 KCNG1 (ENSFCAG00000009793) #36 Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES ENSGT00940000154900.bb #22 Canidae ANCESTRAL SPECIES ENSGT00940000154900.bb #22 Canis_lupus ANCESTRAL SPECIES ENSGT00940000158696 ENSGT00390000000280 ENSGT00390000008481 ENSGT00440000035378.d ENSGT00940000157628 ENSGT00940000158654.u ENSGT00390000002789 ENSGT00400000024448 ENSGT00940000161511 ENSGT00940000162004 ENSGT00910000144347.u.b ENSGT00390000013215 ENSGT01050000244948.c.b ENSGT00940000163435.e.b ENSGT00940000153467.a.a ENSGT00940000154900.bb #22 ENSGT00390000018145.lc.b ENSGT00390000012976.d.s.a.a ENSGT00390000010101 ENSGT00950000183204.b.b.b ENSGT00390000010734.j.b.j.a.b ENSGT00730000111123 ENSGT01030000234595.A.b ENSGT00940000162477 ENSGT00390000014904 ENSGT00950000182906.b.a ENSGT00510000048701 ENSGT00940000156778 ENSGT00530000063408.A ENSGT00940000158473 ENSGT00940000161388 Dog DUPLICATION Dog MODERN SPECIES AIG1 (ENSCAFG00845011826) ENSCAFG00845011947 ADAT2 (ENSCAFG00845011977) PEX3 (ENSCAFG00845012053) FUCA2 (ENSCAFG00845012120) PHACTR2 (ENSCAFG00845012219) ZC2HC1B (ENSCAFG00845012485) ENSCAFG00845012627 ZC2HC1B (ENSCAFG00845012671) PLAGL1 (ENSCAFG00845012757) ENSCAFG00845012810 SF3B5 (ENSCAFG00845012827) STX11 (ENSCAFG00845012845) UTRN (ENSCAFG00845012944) ENSCAFG00845013137 ENSCAFG00845013176 #22 ENSCAFG00845013198 ENSCAFG00845013216 ENSCAFG00845013257 FBXO30 (ENSCAFG00845013317) ENSCAFG00845013342 SHPRH (ENSCAFG00845013379) GRM1 (ENSCAFG00845013661) RAB32 (ENSCAFG00845013710) ADGB (ENSCAFG00845013765) STXBP5 (ENSCAFG00845014465) SAMD5 (ENSCAFG00845017100) SASH1 (ENSCAFG00845017257) APOO (ENSCAFG00845017848) UST (ENSCAFG00845017900) TAB2 (ENSCAFG00845018045) Dog MODERN SPECIES 8 ENSCAFG00845023874 TRIM33 (ENSCAFG00845024048) BCAS2 (ENSCAFG00845024283) DENND2C (ENSCAFG00845024386) AMPD1 (ENSCAFG00845025118) NRAS (ENSCAFG00845026380) CSDE1 (ENSCAFG00845026694) SIKE1 (ENSCAFG00845027120) ENSCAFG00845027157 ENSCAFG00845027184 ENSCAFG00845027218 ENSCAFG00845027397 ENSCAFG00845027680 TSHB (ENSCAFG00845027709) TSPAN2 (ENSCAFG00845027766) ENSCAFG00845027829 #22 NGF (ENSCAFG00845027859) VANGL1 (ENSCAFG00845027910) CASQ2 (ENSCAFG00845028062) ENSCAFG00845028114 SLC22A15 (ENSCAFG00845028198) MAB21L3 (ENSCAFG00845028265) ENSCAFG00845028320 ATP1A1 (ENSCAFG00845028456) ENSCAFG00845028795 IGSF3 (ENSCAFG00845028936) CD2 (ENSCAFG00845028984) PTGFRN (ENSCAFG00845029002) CD101 (ENSCAFG00845029071) ENSCAFG00845029143 TRIM45 (ENSCAFG00845029248) Dingo MODERN SPECIES 125 ENSCAFG00020000167 PEX3 (ENSCAFG00020000229) FUCA2 (ENSCAFG00020000782) PHACTR2 (ENSCAFG00020000796) ENSCAFG00020000817 LTV1 (ENSCAFG00020000832) ENSCAFG00020000837 ZC2HC1B (ENSCAFG00020000843) PLAGL1 (ENSCAFG00020000859) ENSCAFG00020000861 SF3B5 (ENSCAFG00020000873) ENSCAFG00020000880 STX11 (ENSCAFG00020000889) ENSCAFG00020000890 UTRN (ENSCAFG00020001787) ENSCAFG00020010360 #22 ENSCAFG00020010362 ENSCAFG00020010366 EPM2A (ENSCAFG00020010383) FBXO30 (ENSCAFG00020010406) ENSCAFG00020010408 SHPRH (ENSCAFG00020010410) GRM1 (ENSCAFG00020010485) ENSCAFG00020010487 RAB32 (ENSCAFG00020010490) ENSCAFG00020010513 ENSCAFG00020010515 STXBP5 (ENSCAFG00020010616) ENSCAFG00020013426 SAMD5 (ENSCAFG00020013438) SASH1 (ENSCAFG00020013464) Caniformia ANCESTRAL SPECIES ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Ursidae ANCESTRAL SPECIES 14 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230.b #35 ENSGT00940000156230.a #35 Ursus ANCESTRAL SPECIES 152 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 American black bear MODERN SPECIES 5877 CASS4 (ENSUAMG00000018582) #20 CSTF1 (ENSUAMG00000018579) #21 AURKA (ENSUAMG00000018573) #22 Polar bear MODERN SPECIES 219 ENSUMAG00000002566 C20orf85 (ENSUMAG00000002586) ZBP1 (ENSUMAG00000002600) #7 PCK1 (ENSUMAG00000002607) #8 ENSUMAG00000002621 #9 ENSUMAG00000002640 #11 RAE1 (ENSUMAG00000002648) #12 SPO11 (ENSUMAG00000002655) #13 ENSUMAG00000002676 #14 TFAP2C (ENSUMAG00000002685) #15 ENSUMAG00000002703 #16 RTF2 (ENSUMAG00000002707) #19 GCNT7 (ENSUMAG00000002711) #18 CASS4 (ENSUMAG00000002722) #20 CSTF1 (ENSUMAG00000002726) #21 AURKA (ENSUMAG00000002729) #22 FAM210B (ENSUMAG00000002731) #23 MC3R (ENSUMAG00000002734) #24 CBLN4 (ENSUMAG00000002743) #25 Giant Panda MODERN SPECIES 4 ENSAMEG00000012659 C20orf85 (ENSAMEG00000024288) PMEPA1 (ENSAMEG00000012698) ENSAMEG00000029261 #7 PCK1 (ENSAMEG00000012718) #8 CTCFL (ENSAMEG00000012766) #9 RBM38 (ENSAMEG00000028405) #11 RAE1 (ENSAMEG00000012789) #12 SPO11 (ENSAMEG00000012813) #13 BMP7 (ENSAMEG00000012817) #14 TFAP2C (ENSAMEG00000007037) #15 ENSAMEG00000007066 #16 RTF2 (ENSAMEG00000007072) #19 GCNT7 (ENSAMEG00000007103) #18 CASS4 (ENSAMEG00000007113) #20 AURKA (ENSAMEG00000007168) #22 FAM210B (ENSAMEG00000029051) #23 MC3R (ENSAMEG00000019471) #24 CBLN4 (ENSAMEG00000027847) #25 ENSAMEG00000019489 DOK5 (ENSAMEG00000013163) #26 PFDN4 (ENSAMEG00000013164) #27 CYP24A1 (ENSAMEG00000013169) #28 BCAS1 (ENSAMEG00000013223) #29 ZNF217 (ENSAMEG00000013231) #30 ENSAMEG00000019927 TSHZ2 (ENSAMEG00000013234) #31 ZFP64 (ENSAMEG00000013237) #32 SALL4 (ENSAMEG00000013250) #33 ATP9A (ENSAMEG00000013268) #34 NFATC2 (ENSAMEG00000013329) #35 Mustelinae ANCESTRAL SPECIES 58 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 Ferret MODERN SPECIES 236 PCK1 (ENSMPUG00000006661) #8 ENSMPUG00000006657 CTCFL (ENSMPUG00000006570) #9 RBM38 (ENSMPUG00000006518) #11 RAE1 (ENSMPUG00000006504) #12 ENSMPUG00000006499 SPO11 (ENSMPUG00000006486) #13 BMP7 (ENSMPUG00000006477) #14 ENSMPUG00000006472 TFAP2C (ENSMPUG00000006387) #15 ENSMPUG00000006379 #16 GCNT7 (ENSMPUG00000006358) #18 RTF2 (ENSMPUG00000006344) #19 CASS4 (ENSMPUG00000006337) #20 CSTF1 (ENSMPUG00000006243) #21 AURKA (ENSMPUG00000006233) #22 FAM210B (ENSMPUG00000006225) #23 ENSMPUG00000020173 MC3R (ENSMPUG00000020172) #24 CBLN4 (ENSMPUG00000006215) #25 DOK5 (ENSMPUG00000006202) #26 PFDN4 (ENSMPUG00000006173) #27 CYP24A1 (ENSMPUG00000006168) #28 BCAS1 (ENSMPUG00000006155) #29 ZNF217 (ENSMPUG00000006142) #30 TSHZ2 (ENSMPUG00000020171) #31 American mink MODERN SPECIES 82 PMEPA1 (ENSNVIG00000022209) ENSNVIG00000022232 #7 PCK1 (ENSNVIG00000022258) #8 CTCFL (ENSNVIG00000022269) #9 RBM38 (ENSNVIG00000022316) #11 RAE1 (ENSNVIG00000022326) #12 SPO11 (ENSNVIG00000022339) #13 ENSNVIG00000022363 #14 E9PH02 (ENSNVIG00000022373) #14 TFAP2C (ENSNVIG00000022382) #15 ENSNVIG00000022396 #16 RTF2 (ENSNVIG00000022403) #19 GCNT7 (ENSNVIG00000022451) #18 CASS4 (ENSNVIG00000022461) #20 CSTF1 (ENSNVIG00000022484) #21 AURKA (ENSNVIG00000022500) #22 FAM210B (ENSNVIG00000022528) #23 MC3R (ENSNVIG00000022532) #24 CBLN4 (ENSNVIG00000022537) #25 ENSNVIG00000022545 DOK5 (ENSNVIG00000022551) #26 PFD4 (ENSNVIG00000022561) #27 CYP24A1 (ENSNVIG00000022568) #28 BCAS1 (ENSNVIG00000022589) #29 ZNF217 (ENSNVIG00000022614) #30 B1H0U8 (ENSNVIG00000022617) TSHZ2 (ENSNVIG00000022622) #31 Canidae DUPLICATION Canidae ANCESTRAL SPECIES 41 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb.a #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900.cb.a #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696.ab #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Dingo DUPLICATION Dingo MODERN SPECIES 328 USP25 (ENSCAFG00020026422) ENSCAFG00020026525 ENSCAFG00020026527 SAMSN1 (ENSCAFG00020026530) HSPA13 (ENSCAFG00020026532) ENSCAFG00020026534 ENSCAFG00020026540 RBM11 (ENSCAFG00020026541) LIPI (ENSCAFG00020026542) ENSCAFG00020026545 ENSCAFG00020026548 ENSCAFG00020026549 ROBO2 (ENSCAFG00020026553) ENSCAFG00020026658 ENSCAFG00020026669 ENSCAFG00020026688 #22 ENSCAFG00020026690 GBE1 (ENSCAFG00020026699) ENSCAFG00020026703 ENSCAFG00020026705 ENSCAFG00020026706 CADM2 (ENSCAFG00020026710) ENSCAFG00020026716 VGLL3 (ENSCAFG00020026720) ENSCAFG00020026721 CHMP2B (ENSCAFG00020026723) POU1F1 (ENSCAFG00020026725) HTR1F (ENSCAFG00020026730) ENSCAFG00020026732 CGGBP1 (ENSCAFG00020026735) ZNF654 (ENSCAFG00020026738) Dingo MODERN SPECIES 343 C20orf85 (ENSCAFG00020022012) PMEPA1 (ENSCAFG00020022009) ENSCAFG00020022005 #7 PCK1 (ENSCAFG00020021997) #8 CTCFL (ENSCAFG00020021957) #9 RBM38 (ENSCAFG00020021943) #11 RAE1 (ENSCAFG00020021942) #12 SPO11 (ENSCAFG00020021940) #13 ENSCAFG00020021939 #14 TFAP2C (ENSCAFG00020021932) #15 ENSCAFG00020021929 #16 GCNT7 (ENSCAFG00020021927) #18 RTF2 (ENSCAFG00020021926) #19 CASS4 (ENSCAFG00020021924) #20 CSTF1 (ENSCAFG00020021923) #21 ENSCAFG00020021922 #22 FAM210B (ENSCAFG00020021921) #23 MC3R (ENSCAFG00020021920) #24 CBLN4 (ENSCAFG00020021919) #25 DOK5 (ENSCAFG00020021917) #26 ENSCAFG00020021915 #27 CYP24A1 (ENSCAFG00020021905) #28 BCAS1 (ENSCAFG00020021900) #29 ZNF217 (ENSCAFG00020021894) #30 ENSCAFG00020021892 TSHZ2 (ENSCAFG00020021890) #31 ENSCAFG00020021880 ZFP64 (ENSCAFG00020021877) #32 SALL4 (ENSCAFG00020021870) #33 ATP9A (ENSCAFG00020017722) #34 NFATC2 (ENSCAFG00020017548) #35 Dog MODERN SPECIES 16 C24H20orf85 (ENSCAFG00845013121) PMEPA1 (ENSCAFG00845013029) ENSCAFG00845012986 #7 PCK1 (ENSCAFG00845029983) #8 CTCFL (ENSCAFG00845029950) #9 RBM38 (ENSCAFG00845029906) #11 RAE1 (ENSCAFG00845029836) #13 ENSCAFG00845029786 BMP7 (ENSCAFG00845029691) #14 TFAP2C (ENSCAFG00845029577) #15 ENSCAFG00845029529 #16 GCNT7 (ENSCAFG00845029505) #18 RTF2 (ENSCAFG00845029371) #19 CASS4 (ENSCAFG00845029281) #20 CSTF1 (ENSCAFG00845029253) #21 ENSCAFG00845029207 #22 FAM210B (ENSCAFG00845029164) #23 MC3R (ENSCAFG00845029148) #24 CBLN4 (ENSCAFG00845029097) #25 DOK5 (ENSCAFG00845029068) #26 ENSCAFG00845029028 #27 CYP24A1 (ENSCAFG00845028958) #28 BCAS1 (ENSCAFG00845028476) #29 ZNF217 (ENSCAFG00845028152) #30 ENSCAFG00845028117 TSHZ2 (ENSCAFG00845027975) #31 ZFP64 (ENSCAFG00845027811) #32 SALL4 (ENSCAFG00845027669) #33 ATP9A (ENSCAFG00845027235) #34 NFATC2 (ENSCAFG00845026966) #35 KCNG1 (ENSCAFG00845026863) #36 Canidae ANCESTRAL SPECIES ENSGT00940000154900.cb.b #22 Canis_lupus ANCESTRAL SPECIES 21 ENSGT00940000162506 ENSGT00950000183200.A.a.a ENSGT00940000160158 ENSGT00390000012084 ENSGT00940000162152.y ENSGT00940000162152.z ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000162213.a.a.c.a.a ENSGT00940000159074 ENSGT00530000063695.a ENSGT00940000153669.a ENSGT00950000183201.a ENSGT00390000004986 ENSGT00940000161513 ENSGT00940000154900.cb.b #22 ENSGT01100000265450 ENSGT00940000161257.f ENSGT00940000158183 ENSGT00390000003477.n ENSGT00940000155492.b ENSGT00940000159713 Dingo MODERN SPECIES 245 AMOTL1 (ENSCAFG00020016518) CWC15 (ENSCAFG00020016515) ENSCAFG00020016513 ENSCAFG00020016510 ENSCAFG00020016506 ENSCAFG00020016504 ENSCAFG00020016496 ENSCAFG00020016489 FAM76B (ENSCAFG00020016484) CEP57 (ENSCAFG00020016478) MTMR2 (ENSCAFG00020016062) MAML2 (ENSCAFG00020016057) ENSCAFG00020016054 CCDC82 (ENSCAFG00020016052) JRKL (ENSCAFG00020016050) ENSCAFG00020016048 #22 Dog MODERN SPECIES 13 FUT4 (ENSCAFG00845020086) PIWIL4 (ENSCAFG00845019963) AMOTL1 (ENSCAFG00845019406) CWC15 (ENSCAFG00845019309) ENSCAFG00845019286 ENSCAFG00845019240 ENDOD1 (ENSCAFG00845019180) SESN3 (ENSCAFG00845018942) ENSCAFG00845018846 FAM76B (ENSCAFG00845018160) CEP57 (ENSCAFG00845017787) MTMR2 (ENSCAFG00845017531) MAML2 (ENSCAFG00845017403) CCDC82 (ENSCAFG00845017278) JRKL (ENSCAFG00845017252) ENSCAFG00845017193 #22 ENSCAFG00845017020 ENSCAFG00845016836 ENSCAFG00845016498 ENSCAFG00845016310 ENSCAFG00845015949 PGR (ENSCAFG00845015739) Red fox MODERN SPECIES 108 ENSVVUG00000017166 PMEPA1 (ENSVVUG00000017183) ENSVVUG00000017189 #7 PCK1 (ENSVVUG00000017220) #8 CTCFL (ENSVVUG00000017226) #9 RBM38 (ENSVVUG00000017246) #11 RAE1 (ENSVVUG00000017251) #12 SPO11 (ENSVVUG00000017270) #13 BMP7 (ENSVVUG00000017291) #14 TFAP2C (ENSVVUG00000017309) #15 FAM209B (ENSVVUG00000017324) #16 GCNT7 (ENSVVUG00000017328) #18 RTF2 (ENSVVUG00000017332) #19 CASS4 (ENSVVUG00000017340) #20 CSTF1 (ENSVVUG00000017348) #21 AURKA (ENSVVUG00000017355) #22 FAM210B (ENSVVUG00000017391) #23 MC3R (ENSVVUG00000017404) #24 CBLN4 (ENSVVUG00000017416) #25 Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Chiroptera ANCESTRAL SPECIES 7 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Microchiroptera ANCESTRAL SPECIES 6 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Greater horseshoe bat MODERN SPECIES 15 C20orf85 (ENSRFEG00010021221) PMEPA1 (ENSRFEG00010021235) ENSRFEG00010021252 #7 PCK1 (ENSRFEG00010021269) #8 CTCFL (ENSRFEG00010021324) #9 RBM38 (ENSRFEG00010021393) #11 RAE1 (ENSRFEG00010021402) #12 SPO11 (ENSRFEG00010021432) #13 BMP7 (ENSRFEG00010021458) #14 TFAP2C (ENSRFEG00010021478) #15 ENSRFEG00010021483 #16 RTF2 (ENSRFEG00010021502) #19 GCNT7 (ENSRFEG00010021518) #18 CASS4 (ENSRFEG00010021526) #20 CSTF1 (ENSRFEG00010021540) #21 AURKA (ENSRFEG00010021556) #22 FAM210B (ENSRFEG00010021572) #23 MC3R (ENSRFEG00010021575) #24 CBLN4 (ENSRFEG00010011203) #25 DOK5 (ENSRFEG00010011259) #26 ENSRFEG00010011339 PFDN4 (ENSRFEG00010011415) #27 CYP24A1 (ENSRFEG00010011474) #28 BCAS1 (ENSRFEG00010011942) #29 ZNF217 (ENSRFEG00010012136) #30 ENSRFEG00010012201 TSHZ2 (ENSRFEG00010012218) #31 ZFP64 (ENSRFEG00010012242) #32 SALL4 (ENSRFEG00010012441) #33 ATP9A (ENSRFEG00010012611) #34 ENSRFEG00010012770 Microbat MODERN SPECIES 1092 PMEPA1 (ENSMLUG00000011071) ENSMLUG00000017020 #7 PCK1 (ENSMLUG00000011043) #8 ENSMLUG00000011016 #9 RBM38 (ENSMLUG00000011140) #11 RAE1 (ENSMLUG00000011112) #12 SPO11 (ENSMLUG00000011081) #13 BMP7 (ENSMLUG00000014292) #14 ENSMLUG00000022246 ENSMLUG00000010003 #15 ENSMLUG00000005333 #16 RTF2 (ENSMLUG00000005331) #19 CASS4 (ENSMLUG00000010197) #20 ENSMLUG00000025039 ENSMLUG00000026268 #21 AURKA (ENSMLUG00000007925) #22 FAM210B (ENSMLUG00000030626) #23 MC3R (ENSMLUG00000009522) #24 ENSMLUG00000024112 CBLN4 (ENSMLUG00000009001) #25 DOK5 (ENSMLUG00000009108) #26 Megabat MODERN SPECIES 305 ENSPVAG00000003259 #18 RTF2 (ENSPVAG00000003257) #19 CASS4 (ENSPVAG00000003256) #20 CSTF1 (ENSPVAG00000003255) #21 AURKA (ENSPVAG00000003252) #22 FAM210B (ENSPVAG00000003250) #23 Equus ANCESTRAL SPECIES 8 ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Donkey MODERN SPECIES 6 ENSEASG00005023257 #7 PCK1 (ENSEASG00005023259) #8 CTCFL (ENSEASG00005023260) #9 RBM38 (ENSEASG00005024107) #11 ENSEASG00005025783 RAE1 (ENSEASG00005023263) #12 SPO11 (ENSEASG00005023264) #13 ENSEASG00005038095 BMP7 (ENSEASG00005023265) #14 TFAP2C (ENSEASG00005023267) #15 ENSEASG00005025474 #16 ENSEASG00005037027 #18 RTF2 (ENSEASG00005028295) #19 CASS4 (ENSEASG00005023271) #20 CSTF1 (ENSEASG00005023272) #21 AURKA (ENSEASG00005023273) #22 FAM210B (ENSEASG00005023274) #23 MC3R (ENSEASG00005023275) #24 CBLN4 (ENSEASG00005023277) #25 DOK5 (ENSEASG00005023278) #26 PFDN4 (ENSEASG00005023279) #27 CYP24A1 (ENSEASG00005023280) #28 BCAS1 (ENSEASG00005023282) #29 ZNF217 (ENSEASG00005023283) #30 ENSEASG00005023284 ENSEASG00005023285 TSHZ2 (ENSEASG00005023286) #31 ZFP64 (ENSEASG00005023288) #32 ENSEASG00005031550 #32 SALL4 (ENSEASG00005023290) #33 ATP9A (ENSEASG00005023291) #34 Horse MODERN SPECIES 14 PCK1 (ENSECAG00000014037) #8 CTCFL (ENSECAG00000009147) #9 RBM38 (ENSECAG00000007700) #11 ENSECAG00000054153 RAE1 (ENSECAG00000016068) #12 SPO11 (ENSECAG00000012964) #13 ENSECAG00000038425 BMP7 (ENSECAG00000002918) #14 TFAP2C (ENSECAG00000021125) #15 ENSECAG00000021060 #16 GCNT7 (ENSECAG00000016323) #18 RTF2 (ENSECAG00000009943) #19 CASS4 (ENSECAG00000009479) #20 CSTF1 (ENSECAG00000008949) #21 FAM210B (ENSECAG00000023915) #23 AURKA (ENSECAG00000023961) #22 MC3R (ENSECAG00000004637) #24 CBLN4 (ENSECAG00000036307) #25 DOK5 (ENSECAG00000023012) #26 PFDN4 (ENSECAG00000035072) #27 ENSECAG00000053968 CYP24A1 (ENSECAG00000016322) #28 BCAS1 (ENSECAG00000013155) #29 ZNF217 (ENSECAG00000011966) #30 ENSECAG00000040326 TSHZ2 (ENSECAG00000010856) #31 ZFP64 (ENSECAG00000021570) #32 ENSECAG00000052741 #32 SALL4 (ENSECAG00000018533) #33 ATP9A (ENSECAG00000020949) #34 NFATC2 (ENSECAG00000018997) #35 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Xenarthra ANCESTRAL SPECIES 781 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 Sloth MODERN SPECIES 11246 ENSCHOG00000005976 #22 FAM210B (ENSCHOG00000005970) #23 Armadillo MODERN SPECIES 4781 ENSDNOG00000038049 #16 RTF2 (ENSDNOG00000013846) #19 GCNT7 (ENSDNOG00000016201) #18 CASS4 (ENSDNOG00000013836) #20 CSTF1 (ENSDNOG00000031858) #21 AURKA (ENSDNOG00000041342) #22 FAM210B (ENSDNOG00000013803) #23 Afrotheria ANCESTRAL SPECIES 85 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 ENSGT00940000160847 #37 Afrotheria_a ANCESTRAL SPECIES 87 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 ENSGT00940000160847 #37 Elephant MODERN SPECIES 551 PMEPA1 (ENSLAFG00000028967) ENSLAFG00000011094 #7 PCK1 (ENSLAFG00000009266) #8 CTCFL (ENSLAFG00000009261) #9 RBM38 (ENSLAFG00000032066) #11 RAE1 (ENSLAFG00000004501) #12 SPO11 (ENSLAFG00000015320) #13 BMP7 (ENSLAFG00000006468) #14 ENSLAFG00000006475 TFAP2C (ENSLAFG00000007788) #15 ENSLAFG00000020518 #16 GCNT7 (ENSLAFG00000031589) #18 RTF2 (ENSLAFG00000008399) #19 CASS4 (ENSLAFG00000008394) #20 CSTF1 (ENSLAFG00000008393) #21 AURKA (ENSLAFG00000008392) #22 FAM210B (ENSLAFG00000008388) #23 MC3R (ENSLAFG00000005954) #24 CBLN4 (ENSLAFG00000004861) #25 ENSLAFG00000031183 DOK5 (ENSLAFG00000030432) #26 PFDN4 (ENSLAFG00000017064) #27 CYP24A1 (ENSLAFG00000017059) #28 BCAS1 (ENSLAFG00000002312) #29 ZNF217 (ENSLAFG00000017592) #30 TSHZ2 (ENSLAFG00000002942) #31 ZFP64 (ENSLAFG00000022960) #32 SALL4 (ENSLAFG00000004309) #33 ATP9A (ENSLAFG00000004303) #34 NFATC2 (ENSLAFG00000015276) #35 ENSLAFG00000013693 Hyrax MODERN SPECIES 1831 ENSPCAG00000005055 #16 GCNT7 (ENSPCAG00000005042) #18 RTF2 (ENSPCAG00000004987) #19 CASS4 (ENSPCAG00000004884) #20 CSTF1 (ENSPCAG00000004849) #21 AURKA (ENSPCAG00000004804) #22 FAM210B (ENSPCAG00000004784) #23 Tenrec MODERN SPECIES 28 ENSETEG00000004489 #22 Marsupialia ANCESTRAL SPECIES 15 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000005057 #16 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00980000202953 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00940000160402 #18 ENSGT00390000010923 #19 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Diprotodontia ANCESTRAL SPECIES 2 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Wallaby MODERN SPECIES 551 ENSMEUG00000015687 #21 ENSMEUG00000015673 #22 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00950000183066.a.b.a.b ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 koala MODERN SPECIES 11 ENSPCIG00000004738 ENSPCIG00000004764 C20orf85 (ENSPCIG00000003242) PMEPA1 (ENSPCIG00000035085) ENSPCIG00000013662 #8 CTCFL (ENSPCIG00000013656) #9 RBM38 (ENSPCIG00000013648) #11 RAE1 (ENSPCIG00000013644) #12 SPO11 (ENSPCIG00000013637) #13 BMP7 (ENSPCIG00000013634) #14 TFAP2C (ENSPCIG00000027341) #15 ENSPCIG00000027339 #18 RTF2 (ENSPCIG00000027337) #19 CASS4 (ENSPCIG00000027335) #20 CSTF1 (ENSPCIG00000027334) #21 AURKA (ENSPCIG00000027333) #22 ENSPCIG00000009225 #23 Common wonbat MODERN SPECIES 35 RAB22A (ENSVURG00010018482) ENSVURG00010018488 C20orf85 (ENSVURG00010018496) PMEPA1 (ENSVURG00010018513) PCK1 (ENSVURG00010018520) #8 ENSVURG00010018530 #9 RBM38 (ENSVURG00010018536) #11 RAE1 (ENSVURG00010018539) #12 SPO11 (ENSVURG00010018551) #13 BMP7 (ENSVURG00010018589) #14 TFAP2C (ENSVURG00010018603) #15 RTF2 (ENSVURG00010018611) #19 ENSVURG00010018623 #18 CASS4 (ENSVURG00010018629) #20 CSTF1 (ENSVURG00010018632) #21 AURKA (ENSVURG00010018636) #22 FAM210B (ENSVURG00010018643) #23 MC3R (ENSVURG00010018648) #24 CBLN4 (ENSVURG00010018658) #25 ENSVURG00010018660 DOK5 (ENSVURG00010018666) #26 PFDN4 (ENSVURG00010018680) #27 CYP24A1 (ENSVURG00010018690) #28 ENSVURG00010018716 #29 ZNF217 (ENSVURG00010018725) #30 ENSVURG00010018729 TSHZ2 (ENSVURG00010018738) #31 ZFP64 (ENSVURG00010018745) #32 SALL4 (ENSVURG00010018759) #33 ATP9A (ENSVURG00010018777) #34 NFATC2 (ENSVURG00010018804) #35 Tasmanian devil MODERN SPECIES 1 C20orf85 (ENSSHAG00000001817) ENSSHAG00000028430 PMEPA1 (ENSSHAG00000011418) PCK1 (ENSSHAG00000012814) #8 ENSSHAG00000013360 #9 RBM38 (ENSSHAG00000028982) #11 RAE1 (ENSSHAG00000025272) #12 SPO11 (ENSSHAG00000000680) #13 ENSSHAG00000030841 BMP7 (ENSSHAG00000031864) #14 TFAP2C (ENSSHAG00000011591) #15 ENSSHAG00000012427 #18 RTF2 (ENSSHAG00000012236) #19 CASS4 (ENSSHAG00000012669) #20 CSTF1 (ENSSHAG00000013103) #21 AURKA (ENSSHAG00000021349) #22 FAM210B (ENSSHAG00000030459) #23 MC3R (ENSSHAG00000030709) #24 ENSSHAG00000028803 CBLN4 (ENSSHAG00000021656) #25 ENSSHAG00000015205 DOK5 (ENSSHAG00000008979) #26 PFDN4 (ENSSHAG00000024204) #27 CYP24A1 (ENSSHAG00000011826) #28 BCAS1 (ENSSHAG00000012411) #29 ZNF217 (ENSSHAG00000030424) #30 ENSSHAG00000031732 TSHZ2 (ENSSHAG00000015362) #31 ZFP64 (ENSSHAG00000021784) #32 SALL4 (ENSSHAG00000018013) #33 ATP9A (ENSSHAG00000025449) #34 Opossum MODERN SPECIES ENSMODG00000016515 PCK1 (ENSMODG00000016512) #8 CTCFL (ENSMODG00000016490) #9 RBM38 (ENSMODG00000016458) #11 RAE1 (ENSMODG00000016454) #12 SPO11 (ENSMODG00000023253) #13 BMP7 (ENSMODG00000016448) #14 ENSMODG00000046811 TFAP2C (ENSMODG00000016445) #15 RTF2 (ENSMODG00000042098) #16 RTF2 (ENSMODG00000045867) #19 ENSMODG00000016441 #18 CASS4 (ENSMODG00000016439) #20 ENSMODG00000045993 CSTF1 (ENSMODG00000016436) #21 AURKA (ENSMODG00000016435) #22 ENSMODG00000046314 #23 MC3R (ENSMODG00000016430) #24 ENSMODG00000027399 CBLN4 (ENSMODG00000016410) #25 ENSMODG00000038379 ENSMODG00000039226 ENSMODG00000025116 ENSMODG00000040608 ENSMODG00000028344 ENSMODG00000047728 DOK5 (ENSMODG00000016405) #26 PFDN4 (ENSMODG00000016401) #27 CYP24A1 (ENSMODG00000016400) #28 ENSMODG00000025790 #29 ZNF217 (ENSMODG00000016392) #30 Platypus MODERN SPECIES 19 ENSOANG00000009264 PMEPA1 (ENSOANG00000009262) ENSOANG00000019904 PCK1 (ENSOANG00000009261) #8 ENSOANG00000009260 #9 RBM38 (ENSOANG00000009259) #11 RAE1 (ENSOANG00000009257) #12 SPO11 (ENSOANG00000009256) #13 BMP7 (ENSOANG00000009254) #14 TFAP2C (ENSOANG00000009253) #15 ENSOANG00000009252 #16 ENSOANG00000009251 #18 RTF2 (ENSOANG00000009249) #19 ENSOANG00000009246 #20 CSTF1 (ENSOANG00000037738) #21 AURKA (ENSOANG00000011911) #22 FAM210B (ENSOANG00000041846) #23 MC3R (ENSOANG00000009244) #24 CBLN4 (ENSOANG00000045264) #25 DOK5 (ENSOANG00000009239) #26 ENSOANG00000019907 #28 ENSOANG00000003140 #29 ENSOANG00000009238 #27 ZNF217 (ENSOANG00000003139) #30 ENSOANG00000043358 TSHZ2 (ENSOANG00000003138) #31 ZFP64 (ENSOANG00000036388) #32 SALL4 (ENSOANG00000008667) #33 ATP9A (ENSOANG00000008668) #34 NFATC2 (ENSOANG00000008671) #35 KCNG1 (ENSOANG00000008672) #36 Sauria ANCESTRAL SPECIES 16 ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Archelosauria ANCESTRAL SPECIES ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Archosauria ANCESTRAL SPECIES 13 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 59 ENSCPRG00005005079 C20orf85 (ENSCPRG00005005074) PMEPA1 (ENSCPRG00005005067) ZBP1 (ENSCPRG00005005053) #7 PCK1 (ENSCPRG00005005040) #8 ENSCPRG00005005034 #9 RBM38 (ENSCPRG00005005027) #11 RAE1 (ENSCPRG00005005022) #12 ENSCPRG00005005016 #13 BMP7 (ENSCPRG00005004989) #14 TFAP2C (ENSCPRG00005004951) #15 GCNT7 (ENSCPRG00005004942) #18 RTF2 (ENSCPRG00005004938) #19 CASS4 (ENSCPRG00005004885) #20 CSTF1 (ENSCPRG00005004867) #21 ENSCPRG00005004861 #22 FAM210B (ENSCPRG00005004856) #23 MC3R (ENSCPRG00005004851) #24 CBLN4 (ENSCPRG00005004845) #25 DOK5 (ENSCPRG00005004838) #26 PFDN4 (ENSCPRG00005004832) #27 CYP24A1 (ENSCPRG00005004739) #28 BCAS1 (ENSCPRG00005004725) #29 ENSCPRG00005004723 ZNF217 (ENSCPRG00005004720) #30 TSHZ2 (ENSCPRG00005004716) #31 ZFP64 (ENSCPRG00005004712) #32 SALL4 (ENSCPRG00005004707) #33 ATP9A (ENSCPRG00005004681) #34 NFATC2 (ENSCPRG00005004673) #35 KCNG1 (ENSCPRG00005004660) #36 Australian saltwater crocodile MODERN SPECIES 31 CYP19A1 (ENSCPRG00005013939) TNFAIP8L3 (ENSCPRG00005013935) AP4E1 (ENSCPRG00005013912) SCG3 (ENSCPRG00005013902) LYSMD2 (ENSCPRG00005013898) TMOD2 (ENSCPRG00005013892) TMOD3 (ENSCPRG00005013890) LEO1 (ENSCPRG00005013886) MAPK6 (ENSCPRG00005013879) GNB5 (ENSCPRG00005013877) MYO5C (ENSCPRG00005012338) MYO5A (ENSCPRG00005011921) ARPP19 (ENSCPRG00005011909) ATOSA (ENSCPRG00005011900) ONECUT1 (ENSCPRG00005011896) ENSCPRG00005011887 #22 WDR72 (ENSCPRG00005011877) UNC13C (ENSCPRG00005011825) RSL24D1 (ENSCPRG00005011774) RAB27A (ENSCPRG00005011769) PIGB (ENSCPRG00005011765) CCPG1 (ENSCPRG00005011744) ENSCPRG00005011735 DNAAF4 (ENSCPRG00005011732) PYGO1 (ENSCPRG00005011729) PRTG (ENSCPRG00005011722) NEDD4 (ENSCPRG00005011696) RFX7 (ENSCPRG00005011681) TEX9 (ENSCPRG00005011655) MNS1 (ENSCPRG00005011651) ENSCPRG00005011648 Aves ANCESTRAL SPECIES 16 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Neognathae ANCESTRAL SPECIES 16 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Neognathae_b ANCESTRAL SPECIES 17 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Neognathae_c ANCESTRAL SPECIES 20 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Golden eagle MODERN SPECIES 19 VAPB (ENSACCG00020003735) RAB22A (ENSACCG00020003753) ENSACCG00020003769 PMEPA1 (ENSACCG00020003784) PCK1 (ENSACCG00020003800) #8 ENSACCG00020003815 #9 RBM38 (ENSACCG00020003824) #11 RAE1 (ENSACCG00020003842) #12 SPO11 (ENSACCG00020003859) #13 BMP7 (ENSACCG00020003902) #14 TFAP2C (ENSACCG00020008922) #15 RTF2 (ENSACCG00020008941) #19 GCNT7 (ENSACCG00020008953) #18 CASS4 (ENSACCG00020009058) #20 CSTF1 (ENSACCG00020009093) #21 AURKA (ENSACCG00020009105) #22 FAM210B (ENSACCG00020009117) #23 MC3R (ENSACCG00020009123) #24 CBLN4 (ENSACCG00020009135) #25 DOK5 (ENSACCG00020009159) #26 PFDN4 (ENSACCG00020009177) #27 CYP24A1 (ENSACCG00020009197) #28 BCAS1 (ENSACCG00020009215) #29 ZNF217 (ENSACCG00020009238) #30 TSHZ2 (ENSACCG00020009249) #31 ENSACCG00020009252 ZFP64 (ENSACCG00020009263) #32 SALL4 (ENSACCG00020009275) #33 ATP9A (ENSACCG00020009297) #34 NFATC2 (ENSACCG00020009326) #35 KCNG1 (ENSACCG00020009334) #36 Kakapo MODERN SPECIES 5 RAB22A (ENSSHBG00005005612) ENSSHBG00005005631 C20orf85 (ENSSHBG00005005644) PMEPA1 (ENSSHBG00005005664) PCK1 (ENSSHBG00005005689) #8 CTCFL (ENSSHBG00005005711) #9 RBM38 (ENSSHBG00005005731) #11 RAE1 (ENSSHBG00005005743) #12 SPO11 (ENSSHBG00005005764) #13 BMP7 (ENSSHBG00005005778) #14 TFAP2C (ENSSHBG00005005793) #15 RTF2 (ENSSHBG00005005814) #19 GCNT7 (ENSSHBG00005005831) #18 CASS4 (ENSSHBG00005005897) #20 CSTF1 (ENSSHBG00005006299) #21 AURKA (ENSSHBG00005006319) #22 FAM210B (ENSSHBG00005006333) #23 MC3R (ENSSHBG00005006348) #24 CBLN4 (ENSSHBG00005006358) #25 DOK5 (ENSSHBG00005006374) #26 PFDN4 (ENSSHBG00005006394) #27 CYP24A1 (ENSSHBG00005006412) #28 ENSSHBG00005006435 #29 ZNF217 (ENSSHBG00005006452) #30 ENSSHBG00005006486 TSHZ2 (ENSSHBG00005006499) #31 ZFP64 (ENSSHBG00005006515) #32 SALL4 (ENSSHBG00005006532) #33 ATP9A (ENSSHBG00005006556) #34 NFATC2 (ENSSHBG00005006602) #35 KCNG1 (ENSSHBG00005006625) #36 Passeriformes ANCESTRAL SPECIES 19 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Passeriformes_d ANCESTRAL SPECIES 19 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Passeriformes_g ANCESTRAL SPECIES 19 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Passeroidea ANCESTRAL SPECIES 18 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Common canary MODERN SPECIES 21 RAB22A (ENSSCAG00000015354) ENSSCAG00000015362 C20orf85 (ENSSCAG00000015370) PMEPA1 (ENSSCAG00000015373) PCK1 (ENSSCAG00000015374) #8 CTCFL (ENSSCAG00000015378) #9 RBM38 (ENSSCAG00000015387) #11 RAE1 (ENSSCAG00000015388) #12 ENSSCAG00000015391 #13 BMP7 (ENSSCAG00000015394) #14 TFAP2C (ENSSCAG00000015400) #15 RTF2 (ENSSCAG00000015415) #19 GCNT7 (ENSSCAG00000015417) #18 CASS4 (ENSSCAG00000015419) #20 CSTF1 (ENSSCAG00000015423) #21 AURKA (ENSSCAG00000015426) #22 FAM210B (ENSSCAG00000015428) #23 MC3R (ENSSCAG00000015430) #24 CBLN4 (ENSSCAG00000015435) #25 DOK5 (ENSSCAG00000015438) #26 CYP24A1 (ENSSCAG00000015444) #28 ENSSCAG00000015447 #29 ZNF217 (ENSSCAG00000015449) #30 ENSSCAG00000015450 TSHZ2 (ENSSCAG00000015452) #31 ENSSCAG00000015455 #34 SALL4 (ENSSCAG00000015460) #33 ZFP64 (ENSSCAG00000015462) #32 ATP9A (ENSSCAG00000015481) #34 NFATC2 (ENSSCAG00000015508) #35 KCNG1 (ENSSCAG00000015512) #36 Zebra finch MODERN SPECIES 13 ENSTGUG00000008211 C20orf85 (ENSTGUG00000008244) PMEPA1 (ENSTGUG00000024167) PCK1 (ENSTGUG00000008254) #8 ENSTGUG00000008275 #9 RBM38 (ENSTGUG00000022708) #11 RAE1 (ENSTGUG00000008305) #12 SPO11 (ENSTGUG00000008333) #13 BMP7 (ENSTGUG00000020187) #14 ENSTGUG00000029284 TFAP2C (ENSTGUG00000008378) #15 RTF2 (ENSTGUG00000020647) #19 GCNT7 (ENSTGUG00000008427) #18 CASS4 (ENSTGUG00000008443) #20 CSTF1 (ENSTGUG00000008448) #21 AURKA (ENSTGUG00000008457) #22 FAM210B (ENSTGUG00000018839) #23 MC3R (ENSTGUG00000008472) #24 ENSTGUG00000008480 CBLN4 (ENSTGUG00000022496) #25 DOK5 (ENSTGUG00000008495) #26 ENSTGUG00000008507 #27 CYP24A1 (ENSTGUG00000008516) #28 BCAS1 (ENSTGUG00000019321) #29 ZNF217 (ENSTGUG00000023199) #30 TSHZ2 (ENSTGUG00000008551) #31 ENSTGUG00000028603 #32 ENSTGUG00000024302 #33 ENSTGUG00000008565 #34 ENSTGUG00000028285 ENSTGUG00000018954 Medium ground finch MODERN SPECIES 59 VAPB (ENSGFOG00000001216) RAB22A (ENSGFOG00000001235) ENSGFOG00000001243 C20orf85 (ENSGFOG00000001253) PMEPA1 (ENSGFOG00000001264) PCK1 (ENSGFOG00000001281) #8 RBM38 (ENSGFOG00000001297) #11 RAE1 (ENSGFOG00000001311) #12 SPO11 (ENSGFOG00000001325) #13 BMP7 (ENSGFOG00000001333) #14 TFAP2C (ENSGFOG00000001343) #15 RTF2 (ENSGFOG00000001355) #19 GCNT7 (ENSGFOG00000001357) #18 CASS4 (ENSGFOG00000001363) #20 CSTF1 (ENSGFOG00000001373) #21 AURKA (ENSGFOG00000001380) #22 FAM210B (ENSGFOG00000001389) #23 MC3R (ENSGFOG00000001395) #24 ENSGFOG00000001404 CBLN4 (ENSGFOG00000001421) #25 DOK5 (ENSGFOG00000001429) #26 PFDN4 (ENSGFOG00000001440) #27 CYP24A1 (ENSGFOG00000001452) #28 ENSGFOG00000001462 #29 ZNF217 (ENSGFOG00000001470) #30 ENSGFOG00000001475 TSHZ2 (ENSGFOG00000001481) #31 SALL4 (ENSGFOG00000001487) #33 ATP9A (ENSGFOG00000001492) #34 ENSGFOG00000001507 #35 ENSGFOG00000001521 #35 Flycatcher MODERN SPECIES 12 ENSFALG00000010774 C20orf85 (ENSFALG00000023970) PMEPA1 (ENSFALG00000027597) PCK1 (ENSFALG00000010784) #8 ENSFALG00000028038 #9 RBM38 (ENSFALG00000010805) #11 RAE1 (ENSFALG00000010814) #12 SPO11 (ENSFALG00000010818) #13 BMP7 (ENSFALG00000025073) #14 TFAP2C (ENSFALG00000010856) #15 RTF2 (ENSFALG00000010871) #19 ENSFALG00000027930 GCNT7 (ENSFALG00000010896) #18 CASS4 (ENSFALG00000010908) #20 CSTF1 (ENSFALG00000026393) #21 AURKA (ENSFALG00000010927) #22 FAM210B (ENSFALG00000010938) #23 MC3R (ENSFALG00000015070) #24 ENSFALG00000023014 CBLN4 (ENSFALG00000027511) #25 DOK5 (ENSFALG00000010957) #26 ENSFALG00000023955 #27 ENSFALG00000013193 #27 CYP24A1 (ENSFALG00000013185) #28 ENSFALG00000013180 #29 ZNF217 (ENSFALG00000013177) #30 TSHZ2 (ENSFALG00000013173) #31 ZFP64 (ENSFALG00000013162) #32 SALL4 (ENSFALG00000013149) #33 ATP9A (ENSFALG00000013078) #34 NFATC2 (ENSFALG00000013042) #35 Great tit MODERN SPECIES 12 ENSPMJG00000009023 C20orf85 (ENSPMJG00000009026) ENSPMJG00000009030 PMEPA1 (ENSPMJG00000009031) PCK1 (ENSPMJG00000009043) #8 ENSPMJG00000009044 #9 RBM38 (ENSPMJG00000009048) #11 RAE1 (ENSPMJG00000009049) #12 SPO11 (ENSPMJG00000009050) #13 BMP7 (ENSPMJG00000009051) #14 TFAP2C (ENSPMJG00000009053) #15 RTF2 (ENSPMJG00000009056) #19 GCNT7 (ENSPMJG00000009059) #18 CASS4 (ENSPMJG00000009060) #20 CSTF1 (ENSPMJG00000009062) #21 AURKA (ENSPMJG00000009069) #22 FAM210B (ENSPMJG00000009071) #23 MC3R (ENSPMJG00000009072) #24 ENSPMJG00000009073 CBLN4 (ENSPMJG00000009074) #25 DOK5 (ENSPMJG00000009076) #26 PFDN4 (ENSPMJG00000009095) #27 CYP24A1 (ENSPMJG00000009102) #28 ENSPMJG00000009107 #29 ZNF217 (ENSPMJG00000009111) #30 ENSPMJG00000009115 TSHZ2 (ENSPMJG00000009122) #31 ENSPMJG00000009123 ZFP64 (ENSPMJG00000009131) #32 SALL4 (ENSPMJG00000009135) #33 ATP9A (ENSPMJG00000009140) #34 Galloanserae ANCESTRAL SPECIES 15 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Phasianidae ANCESTRAL SPECIES 15 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT01040000244732 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.z #33 ENSGT00940000159181 #34 Japanese quail MODERN SPECIES 12 RAB22A (ENSCJPG00005007223) ENSCJPG00005007225 C20orf85 (ENSCJPG00005007228) PMEPA1 (ENSCJPG00005007232) PCK1 (ENSCJPG00005007233) #8 ENSCJPG00005007234 #9 RBM38 (ENSCJPG00005007237) #11 RAE1 (ENSCJPG00005007238) #12 SPO11 (ENSCJPG00005007239) #13 BMP7 (ENSCJPG00005007240) #14 TFAP2C (ENSCJPG00005007250) #15 RTF2 (ENSCJPG00005007251) #19 GCNT7 (ENSCJPG00005007252) #18 CASS4 (ENSCJPG00005007253) #20 CSTF1 (ENSCJPG00005007254) #21 AURKA (ENSCJPG00005007257) #22 FAM210B (ENSCJPG00005007259) #23 ENSCJPG00005007260 MC3R (ENSCJPG00005007263) #24 CBLN4 (ENSCJPG00005007264) #25 DOK5 (ENSCJPG00005007266) #26 PFDN4 (ENSCJPG00005007271) #27 CYP24A1 (ENSCJPG00005007273) #28 ENSCJPG00005007275 #29 ZNF217 (ENSCJPG00005007278) #30 ENSCJPG00005007279 TSHZ2 (ENSCJPG00005007280) #31 ENSCJPG00005007281 ZFP64 (ENSCJPG00005007284) #32 SALL4 (ENSCJPG00005007289) #33 ATP9A (ENSCJPG00005007291) #34 Phasianidae_b ANCESTRAL SPECIES 15 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT01040000244732 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a.z #33 ENSGT00940000159181 #34 Chicken MODERN SPECIES 12 VAPB (ENSGALG00010014831) RAB22A (ENSGALG00010014894) ENSGALG00010014908 C20orf85 (ENSGALG00010014923) PMEPA1 (ENSGALG00010014942) PCK1 (ENSGALG00010014946) #8 RBM38 (ENSGALG00010014948) #11 RAE1 (ENSGALG00010014997) #12 SPO11 (ENSGALG00010015026) #13 BMP7 (ENSGALG00010015033) #14 TFAP2C (ENSGALG00010015041) #15 RTFDC1 (ENSGALG00010013228) #19 GCNT7 (ENSGALG00010013235) #18 CASS4 (ENSGALG00010016671) #20 CSTF1 (ENSGALG00010013220) #21 AURKA (ENSGALG00010013249) #22 FAM210B (ENSGALG00010013260) #23 ENSGALG00010015192 MC3R (ENSGALG00010016481) #24 CBLN3 (ENSGALG00010015112) #25 DOK5 (ENSGALG00010015131) #26 PFDN4 (ENSGALG00010015141) #27 CYP24A1 (ENSGALG00010015154) #28 BCAS1 (ENSGALG00010015485) #29 ZNF217 (ENSGALG00010015668) #30 TSHZ2 (ENSGALG00010015734) #31 ENSGALG00010015740 ZFP64 (ENSGALG00010015291) #32 SALL4 (ENSGALG00010015318) #33 ATP9A (ENSGALG00010015362) #34 NFATC2 (ENSGALG00010014143) #35 Turkey MODERN SPECIES 14 NFATC2 (ENSMGAG00000009346) #35 ENSMGAG00000009344 #33 ENSMGAG00000009301 #32 ENSMGAG00000018687 ENSMGAG00000009292 #30 ENSMGAG00000019018 ENSMGAG00000018226 ENSMGAG00000015562 #31 BCAS1 (ENSMGAG00000009281) #29 ENSMGAG00000009274 #28 ENSMGAG00000009263 #27 ENSMGAG00000009245 #26 ENSMGAG00000020497 #25 ENSMGAG00000019213 ENSMGAG00000015554 #24 ENSMGAG00000009205 #22 ENSMGAG00000009221 #23 ENSMGAG00000018223 #20 CSTF1 (ENSMGAG00000009186) #21 ENSMGAG00000009131 #20 GCNT7 (ENSMGAG00000009162) #18 ENSMGAG00000009195 #15 ENSMGAG00000009085 #14 ENSMGAG00000009116 #13 ENSMGAG00000009091 #12 ENSMGAG00000009072 #11 ENSMGAG00000009033 #8 ENSMGAG00000009067 #9 PMEPA1 (ENSMGAG00000019499) ENSMGAG00000008917 ENSMGAG00000008890 Anatidae ANCESTRAL SPECIES 22 ENSGT00940000155769 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134.d #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 Pink-footed goose MODERN SPECIES 10 VAPB (ENSABRG00000000037) RAB22A (ENSABRG00000000036) ENSABRG00000000009 C20orf85 (ENSABRG00000022115) PMEPA1 (ENSABRG00000022099) PCK1 (ENSABRG00000022093) #8 RBM38 (ENSABRG00000022082) #11 RAE1 (ENSABRG00000022072) #12 SPO11 (ENSABRG00000022062) #13 BMP7 (ENSABRG00000022058) #14 TFAP2C (ENSABRG00000022045) #15 GCNT7 (ENSABRG00000022042) #18 RTF2 (ENSABRG00000022039) #19 CASS4 (ENSABRG00000022035) #20 CSTF1 (ENSABRG00000022034) #21 AURKA (ENSABRG00000022028) #22 ENSABRG00000022026 #23 MC3R (ENSABRG00000022024) #24 ENSABRG00000022016 CBLN4 (ENSABRG00000022012) #25 DOK5 (ENSABRG00000021991) #26 PFDN4 (ENSABRG00000021989) #27 CYP24A1 (ENSABRG00000021985) #28 BCAS1 (ENSABRG00000021981) #29 ZNF217 (ENSABRG00000021976) #30 ENSABRG00000021974 TSHZ2 (ENSABRG00000021972) #31 ZFP64 (ENSABRG00000021962) #32 SALL4 (ENSABRG00000021954) #33 ATP9A (ENSABRG00000021425) #34 NFATC2 (ENSABRG00000021208) #35 Duck MODERN SPECIES 12 STX16 (ENSAPLG00000002465) APCDD1L (ENSAPLG00000002562) VAPB (ENSAPLG00000002565) RAB22A (ENSAPLG00000002631) ENSAPLG00000002651 PCK1 (ENSAPLG00000002914) #8 ENSAPLG00000029768 #11 RAE1 (ENSAPLG00000003160) #12 SPO11 (ENSAPLG00000003492) #13 BMP7 (ENSAPLG00000003504) #14 TFAP2C (ENSAPLG00000017261) #15 RTF2 (ENSAPLG00000022166) #19 GCNT7 (ENSAPLG00000004099) #18 CASS4 (ENSAPLG00000004370) #20 CSTF1 (ENSAPLG00000004391) #21 AURKA (ENSAPLG00000004677) #22 FAM210B (ENSAPLG00000021271) #23 MC3R (ENSAPLG00000011546) #24 ENSAPLG00000028977 CBLN4 (ENSAPLG00000004863) #25 DOK5 (ENSAPLG00000004868) #26 PFDN4 (ENSAPLG00000025483) #27 CYP24A1 (ENSAPLG00000005136) #28 BCAS1 (ENSAPLG00000006033) #29 ZNF217 (ENSAPLG00000006344) #30 ENSAPLG00000016541 TSHZ2 (ENSAPLG00000011554) #31 ZFP64 (ENSAPLG00000006423) #32 SALL4 (ENSAPLG00000006498) #33 ENSAPLG00000029064 #34 DNAJC5 (ENSAPLG00000030676) African ostrich MODERN SPECIES 933 CUL2 (ENSSCUG00000017830) PARD3 (ENSSCUG00000017850) C20orf85 (ENSSCUG00000017862) PMEPA1 (ENSSCUG00000017865) PCK1 (ENSSCUG00000017866) #8 CTCFL (ENSSCUG00000017867) #9 RBM38 (ENSSCUG00000017869) #11 RAE1 (ENSSCUG00000017871) #12 SPO11 (ENSSCUG00000017872) #13 BMP7 (ENSSCUG00000017878) #14 TFAP2C (ENSSCUG00000017889) #15 RTF2 (ENSSCUG00000017891) #19 GCNT7 (ENSSCUG00000017893) #18 CASS4 (ENSSCUG00000017896) #20 CSTF1 (ENSSCUG00000017900) #21 AURKA (ENSSCUG00000017904) #22 ENSSCUG00000017909 MC3R (ENSSCUG00000017911) #24 CBLN4 (ENSSCUG00000017913) #25 DOK5 (ENSSCUG00000017914) #26 PFDN4 (ENSSCUG00000017917) #27 CYP24A1 (ENSSCUG00000017918) #28 BCAS1 (ENSSCUG00000017920) #29 ZNF217 (ENSSCUG00000017926) #30 ENSSCUG00000017927 TSHZ2 (ENSSCUG00000017928) #31 ZFP64 (ENSSCUG00000017932) #32 SALL4 (ENSSCUG00000017934) #33 ATP9A (ENSSCUG00000017937) #34 NFATC2 (ENSSCUG00000017941) #35 KCNG1 (ENSSCUG00000017944) #36 Cryptodira ANCESTRAL SPECIES 26 ENSGT00390000015137 ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Testudinoidea ANCESTRAL SPECIES 25 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Emydidae ANCESTRAL SPECIES 31 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230.g #35 ENSGT00940000159686 #36 painted turtle MODERN SPECIES 804 TFAP2C (ENSCPBG00000015051) #15 ENSCPBG00000015050 GCNT7 (ENSCPBG00000015048) #18 RTF2 (ENSCPBG00000015046) #19 CASS4 (ENSCPBG00000015044) #20 CSTF1 (ENSCPBG00000015042) #21 AURKA (ENSCPBG00000015040) #22 FAM210B (ENSCPBG00000015039) #23 MC3R (ENSCPBG00000015038) #24 CBLN4 (ENSCPBG00000015031) #25 DOK5 (ENSCPBG00000015026) #26 PFDN4 (ENSCPBG00000015024) #27 CYP24A1 (ENSCPBG00000015021) #28 BCAS1 (ENSCPBG00000015016) #29 ZNF217 (ENSCPBG00000015008) #30 ENSCPBG00000015006 TSHZ2 (ENSCPBG00000015002) #31 ZFP64 (ENSCPBG00000015001) #32 SALL4 (ENSCPBG00000014995) #33 ATP9A (ENSCPBG00000014994) #34 ENSCPBG00000014991 #35 Three-toed box turtle MODERN SPECIES 60 ENSTMTG00000001238 C20orf85 (ENSTMTG00000001265) PMEPA1 (ENSTMTG00000001282) ENSTMTG00000001305 #7 PCK1 (ENSTMTG00000001316) #8 CTCFL (ENSTMTG00000001329) #9 RBM38 (ENSTMTG00000001342) #11 RAE1 (ENSTMTG00000001345) #12 SPO11 (ENSTMTG00000001361) #13 BMP7 (ENSTMTG00000001385) #14 TFAP2C (ENSTMTG00000001427) #15 RTF2 (ENSTMTG00000001439) #19 GCNT7 (ENSTMTG00000001450) #18 CASS4 (ENSTMTG00000001493) #20 CSTF1 (ENSTMTG00000001628) #21 AURKA (ENSTMTG00000001645) #22 FAM210B (ENSTMTG00000001658) #23 MC3R (ENSTMTG00000001669) #24 CBLN4 (ENSTMTG00000001675) #25 DOK5 (ENSTMTG00000001687) #26 PFDN4 (ENSTMTG00000001695) #27 CYP24A1 (ENSTMTG00000001709) #28 BCAS1 (ENSTMTG00000001728) #29 ZNF217 (ENSTMTG00000001742) #30 ENSTMTG00000001749 TSHZ2 (ENSTMTG00000001753) #31 ZFP64 (ENSTMTG00000001756) #32 SALL4 (ENSTMTG00000001765) #33 ATP9A (ENSTMTG00000001771) #34 NFATC2 (ENSTMTG00000001812) #35 KCNG1 (ENSTMTG00000001902) #36 Testudinidae ANCESTRAL SPECIES 28 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000002234 #7 ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Goode s thornscrub tortoise MODERN SPECIES 5 RAB22A (ENSGEVG00005010096) ENSGEVG00005010160 C20orf85 (ENSGEVG00005010246) PMEPA1 (ENSGEVG00005010290) PCK1 (ENSGEVG00005010360) #8 CTCFL (ENSGEVG00005010433) #9 RBM38 (ENSGEVG00005010638) #11 RAE1 (ENSGEVG00005010669) #12 SPO11 (ENSGEVG00005010726) #13 BMP7 (ENSGEVG00005010852) #14 TFAP2C (ENSGEVG00005011067) #15 RTF2 (ENSGEVG00005011157) #19 GCNT7 (ENSGEVG00005011187) #18 CASS4 (ENSGEVG00005011219) #20 CSTF1 (ENSGEVG00005004205) #21 AURKA (ENSGEVG00005004230) #22 FAM210B (ENSGEVG00005004259) #23 MC3R (ENSGEVG00005004271) #24 CBLN4 (ENSGEVG00005004285) #25 DOK5 (ENSGEVG00005004302) #26 PFDN4 (ENSGEVG00005004335) #27 CYP24A1 (ENSGEVG00005004360) #28 BCAS1 (ENSGEVG00005004419) #29 ZNF217 (ENSGEVG00005004473) #30 TSHZ2 (ENSGEVG00005004514) #31 ZFP64 (ENSGEVG00005004540) #32 SALL4 (ENSGEVG00005004574) #33 ATP9A (ENSGEVG00005004625) #34 NFATC2 (ENSGEVG00005004705) #35 KCNG1 (ENSGEVG00005004753) #36 MOCS3 (ENSGEVG00005004780) #37 Abingdon island giant tortoise MODERN SPECIES 878 ENSCABG00000012503 C20orf85 (ENSCABG00000012472) PMEPA1 (ENSCABG00000012468) ENSCABG00000012466 #7 PCK1 (ENSCABG00000012457) #8 CTCFL (ENSCABG00000012371) #9 RBM38 (ENSCABG00000012363) #11 RAE1 (ENSCABG00000012360) #12 SPO11 (ENSCABG00000012358) #13 BMP7 (ENSCABG00000012353) #14 TFAP2C (ENSCABG00000012342) #15 GCNT7 (ENSCABG00000012340) #18 RTF2 (ENSCABG00000012339) #19 CASS4 (ENSCABG00000012284) #20 CSTF1 (ENSCABG00000012278) #21 AURKA (ENSCABG00000012274) #22 FAM210B (ENSCABG00000012271) #23 MC3R (ENSCABG00000012269) #24 CBLN4 (ENSCABG00000012267) #25 Chinese turtle MODERN SPECIES 1549 TFAP2C (ENSPSIG00000010979) #15 RTF2 (ENSPSIG00000011335) #19 GCNT7 (ENSPSIG00000011637) #18 CASS4 (ENSPSIG00000012101) #20 CSTF1 (ENSPSIG00000012545) #21 AURKA (ENSPSIG00000014587) #22 FAM210B (ENSPSIG00000015956) #23 MC3R (ENSPSIG00000000032) #24 CBLN4 (ENSPSIG00000016039) #25 CYP24A1 (ENSPSIG00000016130) #28 PFDN4 (ENSPSIG00000006869) #27 BCAS1 (ENSPSIG00000007149) #29 TSHZ2 (ENSPSIG00000007559) #31 ZFP64 (ENSPSIG00000008007) #32 SALL4 (ENSPSIG00000009066) #33 ATP9A (ENSPSIG00000009087) #34 NFATC2 (ENSPSIG00000013745) #35 KCNG1 (ENSPSIG00000014441) #36 MOCS3 (ENSPSIG00000014735) #37 DPM1 (ENSPSIG00000014853) ADNP (ENSPSIG00000015209) Lepidosauria ANCESTRAL SPECIES 6 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Laterata ANCESTRAL SPECIES 14 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000167176 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00560000078660 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 Common wall lizard MODERN SPECIES 14 PMEPA1 (ENSPMRG00000003680) PCK1 (ENSPMRG00000003673) #8 ENSPMRG00000003669 #9 RBM38 (ENSPMRG00000003653) #11 ENSPMRG00000003647 ENSPMRG00000003644 BMP7 (ENSPMRG00000003639) #14 ENSPMRG00000003637 ENSPMRG00000003636 ENSPMRG00000003632 TFAP2C (ENSPMRG00000003627) #15 GCNT7 (ENSPMRG00000003624) #18 RTF2 (ENSPMRG00000003622) #19 CASS4 (ENSPMRG00000003614) #20 CSTF1 (ENSPMRG00000003603) #21 AURKA (ENSPMRG00000003589) #22 FAM210B (ENSPMRG00000003581) #23 MC3R (ENSPMRG00000003576) #24 ENSPMRG00000003556 CBLN4 (ENSPMRG00000003548) #25 DOK5 (ENSPMRG00000003538) #26 PFDN4 (ENSPMRG00000003521) #27 CYP24A1 (ENSPMRG00000003513) #28 BCAS1 (ENSPMRG00000010750) #29 ZNF217 (ENSPMRG00000010743) #30 ENSPMRG00000010740 TSHZ2 (ENSPMRG00000010735) #31 ZFP64 (ENSPMRG00000010733) #32 SALL4 (ENSPMRG00000010728) #33 ENSPMRG00000010724 ATP9A (ENSPMRG00000010709) #34 Argentine black and white tegu MODERN SPECIES 66 BMP7 (ENSSMRG00000005598) #14 TFAP2C (ENSSMRG00000005602) #15 ENSSMRG00000005629 RTF2 (ENSSMRG00000005651) #19 GCNT7 (ENSSMRG00000005655) #18 CASS4 (ENSSMRG00000005656) #20 CSTF1 (ENSSMRG00000005658) #21 AURKA (ENSSMRG00000005659) #22 FAM210B (ENSSMRG00000005663) #23 MC3R (ENSSMRG00000005679) #24 CBLN4 (ENSSMRG00000005683) #25 DOK5 (ENSSMRG00000005745) #26 PFDN4 (ENSSMRG00000005753) #27 CYP24A1 (ENSSMRG00000005759) #28 BCAS1 (ENSSMRG00000005775) #29 ENSSMRG00000005784 ZNF217 (ENSSMRG00000005792) #30 ENSSMRG00000005794 TSHZ2 (ENSSMRG00000005796) #31 ENSSMRG00000005803 ZFP64 (ENSSMRG00000005813) #32 ENSSMRG00000005815 SALL4 (ENSSMRG00000005816) #33 Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 ENSGT00940000160847 #37 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT01000000217917 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230.m #35 ENSGT00940000159686 #36 Indian cobra MODERN SPECIES 2 RAB22A (ENSNNAG00000002717) ENSNNAG00000002774 C20orf85 (ENSNNAG00000003050) PMEPA1 (ENSNNAG00000003055) PCK1 (ENSNNAG00000003066) #8 ENSNNAG00000003078 #9 RBM38 (ENSNNAG00000003088) #11 RAE1 (ENSNNAG00000003105) #12 SPO11 (ENSNNAG00000003137) #13 BMP7 (ENSNNAG00000003176) #14 TFAP2C (ENSNNAG00000003202) #15 RTF2 (ENSNNAG00000003286) #19 GCNT7 (ENSNNAG00000003300) #18 CASS4 (ENSNNAG00000003317) #20 CSTF1 (ENSNNAG00000003349) #21 AURKA (ENSNNAG00000003364) #22 FAM210B (ENSNNAG00000003442) #23 CBLN4 (ENSNNAG00000003447) #25 ENSNNAG00000003454 DOK5 (ENSNNAG00000003461) #26 ENSNNAG00000003485 PFDN4 (ENSNNAG00000003493) #27 CYP24A1 (ENSNNAG00000003507) #28 BCAS1 (ENSNNAG00000003553) #29 ZNF217 (ENSNNAG00000003595) #30 ENSNNAG00000003636 ENSNNAG00000003674 #31 ENSNNAG00000003680 ZFP64 (ENSNNAG00000003693) #32 SALL4 (ENSNNAG00000003718) #33 ATP9A (ENSNNAG00000003775) #34 Elapidae_a ANCESTRAL SPECIES 3 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT01000000217917 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230.m #35 ENSGT00940000159686 #36 Blue-lipped sea krait MODERN SPECIES 2376 CSTF1 (ENSLLTG00000001542) #21 AURKA (ENSLLTG00000001531) #22 FAM210B (ENSLLTG00000001527) #23 Acanthophiinae ANCESTRAL SPECIES 2 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT00940000154459.A ENSGT00390000000724.c.a ENSGT00390000001912.f #8 ENSGT00940000161524 #9 ENSGT00940000158489 #11 ENSGT00950000183091.B.b.b #12 ENSGT00390000001787 #13 ENSGT00940000156490 #14 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000159728 #25 ENSGT01030000237186 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT01000000217917 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230.m #35 Eastern brown snake MODERN SPECIES 8 VAPB (ENSPTXG00000002063) RAB22A (ENSPTXG00000002067) ENSPTXG00000002077 PMEPA1 (ENSPTXG00000002157) PCK1 (ENSPTXG00000002161) #8 ENSPTXG00000002166 #9 RBM38 (ENSPTXG00000002171) #11 RAE1 (ENSPTXG00000002174) #12 SPO11 (ENSPTXG00000002179) #13 BMP7 (ENSPTXG00000002182) #14 TFAP2C (ENSPTXG00000002226) #15 RTF2 (ENSPTXG00000002227) #19 GCNT7 (ENSPTXG00000002228) #18 CASS4 (ENSPTXG00000002231) #20 CSTF1 (ENSPTXG00000002250) #21 AURKA (ENSPTXG00000002251) #22 FAM210B (ENSPTXG00000002254) #23 MC3R (ENSPTXG00000002257) #24 CBLN4 (ENSPTXG00000002260) #25 ENSPTXG00000002261 DOK5 (ENSPTXG00000002263) #26 PFDN4 (ENSPTXG00000002266) #27 CYP24A1 (ENSPTXG00000002267) #28 ENSPTXG00000002270 #29 ZNF217 (ENSPTXG00000002271) #30 TSHZ2 (ENSPTXG00000002274) #31 ENSPTXG00000002275 ZFP64 (ENSPTXG00000002276) #32 SALL4 (ENSPTXG00000002277) #33 ATP9A (ENSPTXG00000002278) #34 NFATC2 (ENSPTXG00000002280) #35 Mainland tiger snake MODERN SPECIES 10 RAB22A (ENSNSUG00000014236) ENSNSUG00000014237 C20orf85 (ENSNSUG00000014257) PMEPA1 (ENSNSUG00000014259) ENSNSUG00000014262 #9 RBM38 (ENSNSUG00000014263) #11 RAE1 (ENSNSUG00000014264) #12 SPO11 (ENSNSUG00000014275) #13 BMP7 (ENSNSUG00000014276) #14 TFAP2C (ENSNSUG00000014277) #15 RTF2 (ENSNSUG00000014279) #19 GCNT7 (ENSNSUG00000014280) #18 CASS4 (ENSNSUG00000014285) #20 CSTF1 (ENSNSUG00000014298) #21 ENSNSUG00000014299 AURKA (ENSNSUG00000014300) #22 FAM210B (ENSNSUG00000014301) #23 MC3R (ENSNSUG00000014302) #24 CBLN4 (ENSNSUG00000014303) #25 ENSNSUG00000014304 DOK5 (ENSNSUG00000014305) #26 PFDN4 (ENSNSUG00000014306) #27 CYP24A1 (ENSNSUG00000014307) #28 ENSNSUG00000014308 #29 ZNF217 (ENSNSUG00000014309) #30 TSHZ2 (ENSNSUG00000014310) #31 ENSNSUG00000014311 ZFP64 (ENSNSUG00000014312) #32 SALL4 (ENSNSUG00000014314) #33 ATP9A (ENSNSUG00000014315) #34 NFATC2 (ENSNSUG00000014316) #35 Lizard MODERN SPECIES 831 PMEPA1 (ENSACAG00000016364) PCK1 (ENSACAG00000016298) #8 CTCFL (ENSACAG00000016243) #9 RBM38 (ENSACAG00000016238) #11 ENSACAG00000040533 RAE1 (ENSACAG00000016197) #12 SPO11 (ENSACAG00000038351) #13 BMP7 (ENSACAG00000016133) #14 ENSACAG00000017043 TFAP2C (ENSACAG00000016089) #15 RTF2 (ENSACAG00000016027) #19 GCNT7 (ENSACAG00000016076) #18 CASS4 (ENSACAG00000016020) #20 ENSACAG00000044512 CSTF1 (ENSACAG00000015997) #21 AURKA (ENSACAG00000015968) #22 FAM210B (ENSACAG00000015965) #23 ENSACAG00000036819 ENSACAG00000037663 CBLN4 (ENSACAG00000045061) #25 Anura ANCESTRAL SPECIES 118 ENSGT00950000182848.c.b.a.b #15 ENSGT00390000010923 #19 ENSGT00940000160402 #18 ENSGT00950000183008.a.a.a.a #20 ENSGT00910000144253 #21 ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT01030000234510.a.a.a.a.b #24 ENSGT00940000165811 ENSGT00940000159728 #25 ENSGT00940000160725 #26 ENSGT00390000006696 #27 ENSGT00950000182905.b.k #28 ENSGT00390000003167 #29 ENSGT00940000159884 #30 ENSGT00950000183051.a.b #31 ENSGT00940000156405 #32 ENSGT00940000155384.a #33 ENSGT00940000159181 #34 ENSGT00940000156230 #35 ENSGT00940000159686 #36 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000025643 ENSLLEG00000025686 PCK1 (ENSLLEG00000025876) #8 ENSLLEG00000025936 RBM38 (ENSLLEG00000025970) #11 RAE1 (ENSLLEG00000026030) #12 SPO11 (ENSLLEG00000026372) #13 BMP7 (ENSLLEG00000026478) #14 ENSLLEG00000026585 TFAP2C (ENSLLEG00000026605) #15 RTF2 (ENSLLEG00000026747) #19 GCNT7 (ENSLLEG00000026918) #18 CASS4 (ENSLLEG00000026954) #20 ENSLLEG00000027081 CSTF1 (ENSLLEG00000027100) #21 AURKA (ENSLLEG00000027137) #22 FAM210B (ENSLLEG00000027183) #23 ENSLLEG00000027224 MC3R (ENSLLEG00000027236) #24 ENSLLEG00000027281 CBLN4 (ENSLLEG00000027370) #25 ENSLLEG00000027400 ENSLLEG00000027433 DOK5 (ENSLLEG00000027460) #26 ENSLLEG00000027648 PFDN4 (ENSLLEG00000027696) #27 CYP24A1 (ENSLLEG00000027731) #28 ENSLLEG00000027840 #29 ZNF217 (ENSLLEG00000028506) #30 TSHZ2 (ENSLLEG00000028593) #31 ENSLLEG00000028601 Frog MODERN SPECIES 1 c20orf85 (ENSXETG00000011262) ENSXETG00000041597 pmepa1 (ENSXETG00000044040) zbp1 (ENSXETG00000043182) ENSXETG00000011265 pck1 (ENSXETG00000011266) #8 rbm38 (ENSXETG00000043310) #11 rae1 (ENSXETG00000048683) #12 spo11 (ENSXETG00000011271) #13 bmp7.1 (ENSXETG00000011272) #14 tfap2c (ENSXETG00000012025) #15 rtf2 (ENSXETG00000012028) #19 gcnt7 (ENSXETG00000033795) #18 cass4 (ENSXETG00000012029) #20 cstf1 (ENSXETG00000012030) #21 aurka (ENSXETG00000012032) #22 fam210b (ENSXETG00000041481) #23 ENSXETG00000012147 mlx (ENSXETG00000012035) coq10b (ENSXETG00000012036) coasy (ENSXETG00000012037) ENSXETG00000038353 atp6v0a1 (ENSXETG00000007635) cavin1 (ENSXETG00000007639) stat3.2 (ENSXETG00000007642) ENSXETG00000048480 ENSXETG00000043024 ENSXETG00000047420 stat5b (ENSXETG00000000836) ENSXETG00000045053 ENSXETG00000041112 Coelacanth MODERN SPECIES 293 PMEPA1 (ENSLACG00000018056) ENSLACG00000018008 PCK1 (ENSLACG00000017971) #8 RBM38 (ENSLACG00000022659) #11 RAE1 (ENSLACG00000017740) #12 SPO11 (ENSLACG00000017703) #13 BMP7 (ENSLACG00000017567) #14 TFAP2C (ENSLACG00000016799) #15 GCNT7 (ENSLACG00000016587) #18 RTF2 (ENSLACG00000016541) #19 CASS4 (ENSLACG00000016450) #20 CSTF1 (ENSLACG00000016278) #21 ENSLACG00000016233 AURKA (ENSLACG00000016221) #22 FAM210B (ENSLACG00000016160) #23 ENSLACG00000015637 CBLN4 (ENSLACG00000015548) #25 PFDN4 (ENSLACG00000014225) #27 CYP24A1 (ENSLACG00000014028) #28 ZNF217 (ENSLACG00000012453) #30 TSHZ2 (ENSLACG00000011012) #31 ZFP64 (ENSLACG00000004984) #32 Actinopterygii ANCESTRAL SPECIES 31 ENSGT00950000183066.a.b.a.b ENSGT00940000157009 ENSGT00940000155769 ENSGT00640000091492.b ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT01100000264672 ENSGT01090000261049 ENSGT00940000156300 ENSGT00940000164142 ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT00940000154090.b ENSGT00720000108866 ENSGT00940000162174 ENSGT00490000043380 ENSGT01100000263545.a.b.c.b Neopterygii ANCESTRAL SPECIES 41 ENSGT00950000183066.a.b.a.b ENSGT00940000157009 ENSGT00940000155769 ENSGT00640000091492.b ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT01100000264672 ENSGT01090000261049 ENSGT00940000156300 ENSGT00940000164142 ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 #22 ENSGT00940000156134 #23 ENSGT00940000154090.b ENSGT00720000108866 ENSGT00940000162174 ENSGT00490000043380 ENSGT01100000263545.a.b.c.b Spotted gar MODERN SPECIES 656 cox4i2 (ENSLOCG00000006091) bcl2l1 (ENSLOCG00000006112) tpx2 (ENSLOCG00000006128) ENSLOCG00000006150 ENSLOCG00000006159 ENSLOCG00000006171 eya2 (ENSLOCG00000006186) STX16 (ENSLOCG00000006206) npepl1 (ENSLOCG00000006225) ctsz (ENSLOCG00000006242) nelfcd (ENSLOCG00000006254) ENSLOCG00000006266 tubb1 (ENSLOCG00000006292) atp5f1e (ENSLOCG00000006308) prelid3b (ENSLOCG00000006326) aurka (ENSLOCG00000006337) #22 ENSLOCG00000006358 slc32a1 (ENSLOCG00000006370) ARHGAP40 (ENSLOCG00000006390) ACTR5 (ENSLOCG00000006403) fam210b (ENSLOCG00000006416) #23 map1lc3a (ENSLOCG00000006440) DYNLRB1 (ENSLOCG00000006447) st3gal8 (ENSLOCG00000006466) ENSLOCG00000006485 ENSLOCG00000006507 cpne1 (ENSLOCG00000006532) rbm12 (ENSLOCG00000018363) nfs1 (ENSLOCG00000006546) si:ch211-15p9.2 (ENSLOCG00000018364) rbm39b (ENSLOCG00000006562) Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000157009 ENSGT00940000155769.`b.b ENSGT00640000091492.b ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT01100000264672 ENSGT00940000155769.`b.a ENSGT01090000261049 ENSGT00940000156300 ENSGT00940000164142 ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000171242 ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Clupeocephala ANCESTRAL SPECIES 7 ENSGT00950000183066.a.b.a.b ENSGT00940000157009 ENSGT01080000257445 ENSGT00940000155769.`b.b ENSGT00640000091492.b ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT00940000156300 ENSGT00940000164142 ENSGT00940000167348 ENSGT00950000182810.A.a.a.b ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Carangaria ANCESTRAL SPECIES 3 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Turbot MODERN SPECIES 18 SNTA1 (ENSSMAG00000011339) tox2 (ENSSMAG00000011352) st7l (ENSSMAG00000011496) ENSSMAG00000011544 CTTNBP2NL (ENSSMAG00000011554) KCND3 (ENSSMAG00000011563) INKA2 (ENSSMAG00000011594) ENSSMAG00000011602 timm17a (ENSSMAG00000011624) ENSSMAG00000011649 shisa4 (ENSSMAG00000011653) ipo9 (ENSSMAG00000011675) ENSSMAG00000011773 ENSSMAG00000011813 prelid3b (ENSSMAG00000011815) ENSSMAG00000011833 #22 slc32a1 (ENSSMAG00000031105) ENSSMAG00000011867 ENSSMAG00000011937 fam210b (ENSSMAG00000024290) #23 NDUFA4L2 (ENSSMAG00000011983) shmt2 (ENSSMAG00000012014) NXPH4 (ENSSMAG00000012048) STAC3 (ENSSMAG00000012053) R3HDM2 (ENSSMAG00000012073) INHBC (ENSSMAG00000024860) gli1 (ENSSMAG00000012216) ENSSMAG00000028151 ARHGAP9 (ENSSMAG00000012272) mars1 (ENSSMAG00000012409) ddit3 (ENSSMAG00000012530) Tongue sole MODERN SPECIES 2 ENSCSEG00000018938 shisa4 (ENSCSEG00000018934) ENSCSEG00000018923 timm17a (ENSCSEG00000018915) ENSCSEG00000018905 INKA2 (ENSCSEG00000018903) KCND3 (ENSCSEG00000018892) CTTNBP2NL (ENSCSEG00000018873) wnt2ba (ENSCSEG00000018855) ncoa5 (ENSCSEG00000018845) ipo9 (ENSCSEG00000018787) ENSCSEG00000018773 GNAS (ENSCSEG00000018764) ENSCSEG00000018756 prelid3b (ENSCSEG00000018746) aurka (ENSCSEG00000018676) #22 slc32a1 (ENSCSEG00000018665) ENSCSEG00000018649 PPP1R16B (ENSCSEG00000018620) ENSCSEG00000018613 #23 ENSCSEG00000018605 pdhb (ENSCSEG00000018590) pxk (ENSCSEG00000018577) HTD2 (ENSCSEG00000018574) rpp14 (ENSCSEG00000018570) ABHD6 (ENSCSEG00000018565) lmcd1 (ENSCSEG00000018560) gmppb (ENSCSEG00000018546) pde12 (ENSCSEG00000018538) ENSCSEG00000018534 ENSCSEG00000018531 Carangaria_A ANCESTRAL SPECIES 7 ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Barramundi perch MODERN SPECIES 73 ENSLCAG00010003364 tmem230a (ENSLCAG00010003369) ENSLCAG00010003378 LRRTM4 (ENSLCAG00010003385) ENSLCAG00010003388 ENSLCAG00010003392 INKA2 (ENSLCAG00010003393) rap1ab (ENSLCAG00010003397) timm17a (ENSLCAG00010003417) LMOD1 (ENSLCAG00010003452) shisa4 (ENSLCAG00010003456) ipo9 (ENSLCAG00010003550) GNAS (ENSLCAG00010003887) ENSLCAG00010004060 prelid3b (ENSLCAG00010004063) aurka (ENSLCAG00010004080) #22 slc32a1 (ENSLCAG00010004097) ARHGAP40 (ENSLCAG00010004100) PPP1R16B (ENSLCAG00010004105) COX14 (ENSLCAG00010004109) cers5 (ENSLCAG00010004157) gpd1b (ENSLCAG00010004362) smarcd1 (ENSLCAG00010004490) ENSLCAG00010004870 Seriola ANCESTRAL SPECIES 20 ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Greater amberjack MODERN SPECIES 53 INKA2 (ENSSDUG00000019805) rap1ab (ENSSDUG00000019780) timm17a (ENSSDUG00000019755) LMOD1 (ENSSDUG00000019745) shisa4 (ENSSDUG00000019733) ipo9 (ENSSDUG00000019692) GNAS (ENSSDUG00000019678) ENSSDUG00000019624 prelid3b (ENSSDUG00000019608) aurka (ENSSDUG00000019595) #22 slc32a1 (ENSSDUG00000019584) ARHGAP40 (ENSSDUG00000019566) PPP1R16B (ENSSDUG00000019542) fam210b (ENSSDUG00000019531) #23 ENSSDUG00000019521 NDUFA4L2 (ENSSDUG00000019505) shmt2 (ENSSDUG00000019474) NXPH4 (ENSSDUG00000019467) STAC3 (ENSSDUG00000019405) R3HDM2 (ENSSDUG00000019269) INHBC (ENSSDUG00000019254) gli1 (ENSSDUG00000019214) ARHGAP9 (ENSSDUG00000019146) ddit3 (ENSSDUG00000019137) mars1 (ENSSDUG00000019070) Yellowtail amberjack MODERN SPECIES 2341 INKA2 (ENSSLDG00000017064) rap1ab (ENSSLDG00000017079) timm17a (ENSSLDG00000017111) LMOD1 (ENSSLDG00000017136) shisa4 (ENSSLDG00000017145) ipo9 (ENSSLDG00000017170) GNAS (ENSSLDG00000017224) ENSSLDG00000017254 prelid3b (ENSSLDG00000017268) aurka (ENSSLDG00000017300) #22 slc32a1 (ENSSLDG00000017339) ARHGAP40 (ENSSLDG00000017351) ENSSLDG00000017379 Anabantaria ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Zig-zag eel MODERN SPECIES 19 cbfa2t2 (ENSMAMG00000008483) SNTA1 (ENSMAMG00000008517) tox2 (ENSMAMG00000008566) st7l (ENSMAMG00000008630) ENSMAMG00000008666 CTTNBP2NL (ENSMAMG00000008683) KCND3 (ENSMAMG00000008691) INKA2 (ENSMAMG00000026222) ENSMAMG00000026108 timm17a (ENSMAMG00000024741) ENSMAMG00000008764 shisa4 (ENSMAMG00000008778) ipo9 (ENSMAMG00000008798) ENSMAMG00000009479 prelid3b (ENSMAMG00000009500) ENSMAMG00000009517 #22 slc32a1 (ENSMAMG00000009549) ENSMAMG00000009558 ENSMAMG00000009581 fam210b (ENSMAMG00000028164) #23 NDUFA4L2 (ENSMAMG00000009667) shmt2 (ENSMAMG00000009686) NXPH4 (ENSMAMG00000009730) STAC3 (ENSMAMG00000009748) R3HDM2 (ENSMAMG00000009793) INHBC (ENSMAMG00000009832) gli1 (ENSMAMG00000009841) ENSMAMG00000009904 ARHGAP9 (ENSMAMG00000009917) mars1 (ENSMAMG00000010012) ddit3 (ENSMAMG00000028715) Anabantoidei ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Climbing perch MODERN SPECIES 18 SNTA1 (ENSATEG00000025050) tox2 (ENSATEG00000025049) st7l (ENSATEG00000025048) ENSATEG00000025047 CTTNBP2NL (ENSATEG00000025046) KCND3 (ENSATEG00000025045) INKA2 (ENSATEG00000025044) ENSATEG00000025043 timm17a (ENSATEG00000025041) ENSATEG00000025040 shisa4 (ENSATEG00000025039) ipo9 (ENSATEG00000025038) ENSATEG00000026000 ENSATEG00000025036 prelid3b (ENSATEG00000025035) ENSATEG00000025034 #22 slc32a1 (ENSATEG00000027089) ENSATEG00000025032 ENSATEG00000025030 fam210b (ENSATEG00000025029) #23 NDUFA4L2 (ENSATEG00000025028) shmt2 (ENSATEG00000025027) NXPH4 (ENSATEG00000025026) STAC3 (ENSATEG00000025025) R3HDM2 (ENSATEG00000025024) ENSATEG00000028260 INHBC (ENSATEG00000025023) gli1 (ENSATEG00000025022) ENSATEG00000025021 ARHGAP9 (ENSATEG00000025020) ddit3 (ENSATEG00000029330) Siamese fighting fish MODERN SPECIES 16 ENSBSLG00000025875 tox2 (ENSBSLG00000025874) st7l (ENSBSLG00000025865) wnt2ba (ENSBSLG00000025863) CTTNBP2NL (ENSBSLG00000025860) KCND3 (ENSBSLG00000025857) INKA2 (ENSBSLG00000025856) ENSBSLG00000025855 timm17a (ENSBSLG00000025853) LMOD1 (ENSBSLG00000025851) shisa4 (ENSBSLG00000025850) ipo9 (ENSBSLG00000025814) GNAS (ENSBSLG00000025750) ENSBSLG00000025735 prelid3b (ENSBSLG00000025726) aurka (ENSBSLG00000025721) #22 slc32a1 (ENSBSLG00000025718) ENSBSLG00000025710 ENSBSLG00000025708 PPP1R16B (ENSBSLG00000025704) fam210b (ENSBSLG00000025702) #23 NDUFA4L2 (ENSBSLG00000025694) shmt2 (ENSBSLG00000025565) NXPH4 (ENSBSLG00000025548) ENSBSLG00000025545 STAC3 (ENSBSLG00000025514) R3HDM2 (ENSBSLG00000025375) INHBC (ENSBSLG00000025366) gli1 (ENSBSLG00000025362) ENSBSLG00000025360 ARHGAP9 (ENSBSLG00000025351) Eupercaria ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Eupecaria_A ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 European seabass MODERN SPECIES 10 cbfa2t2 (ENSDLAG00005012412) SNTA1 (ENSDLAG00005012306) tox2 (ENSDLAG00005012281) st7l (ENSDLAG00005011086) ENSDLAG00005011030 CTTNBP2NL (ENSDLAG00005010984) KCND3 (ENSDLAG00005010969) INKA2 (ENSDLAG00005010963) ENSDLAG00005010956 ENSDLAG00005010947 ENSDLAG00005030490 ipo9 (ENSDLAG00005010259) ENSDLAG00005031086 TUB (ENSDLAG00005009663) prelid3b (ENSDLAG00005009646) STK6 (ENSDLAG00005009640) #22 slc32a1 (ENSDLAG00005009631) ENSDLAG00005009549 ENSDLAG00005009500 NDUFA4L2 (ENSDLAG00005026923) fam210b (ENSDLAG00005033260) #23 ENSDLAG00005008419 NXPH4 (ENSDLAG00005008386) STAC3 (ENSDLAG00005034079) R3HDM2 (ENSDLAG00005007143) INHBC (ENSDLAG00005007075) gli1 (ENSDLAG00005007028) ENSDLAG00005030897 ARHGAP9 (ENSDLAG00005006921) mars1 (ENSDLAG00005004499) ddit3 (ENSDLAG00005013732) Large yellow croaker MODERN SPECIES 478 cbfa2t2 (ENSLCRG00005021634) SNTA1 (ENSLCRG00005021499) tox2 (ENSLCRG00005021471) st7l (ENSLCRG00005021337) wnt2ba (ENSLCRG00005021312) CTTNBP2NL (ENSLCRG00005021309) KCND3 (ENSLCRG00005021304) INKA2 (ENSLCRG00005021302) rap1ab (ENSLCRG00005021300) timm17a (ENSLCRG00005021299) LMOD1 (ENSLCRG00005021298) shisa4 (ENSLCRG00005021290) ipo9 (ENSLCRG00005021228) prelid3b (ENSLCRG00005021196) ENSLCRG00005021193 aurka (ENSLCRG00005021191) #22 slc32a1 (ENSLCRG00005021190) ENSLCRG00005021187 ENSLCRG00005021179 ENSLCRG00005021174 PPP1R16B (ENSLCRG00005021158) ENSLCRG00005021143 #23 NDUFA4L2 (ENSLCRG00005021136) shmt2 (ENSLCRG00005020491) NXPH4 (ENSLCRG00005020437) STAC3 (ENSLCRG00005020432) R3HDM2 (ENSLCRG00005020340) INHBC (ENSLCRG00005020329) gli1 (ENSLCRG00005020328) ENSLCRG00005020321 ARHGAP9 (ENSLCRG00005020314) Gilthead seabream MODERN SPECIES 20 SNTA1 (ENSSAUG00010017758) tox2 (ENSSAUG00010017887) st7l (ENSSAUG00010017894) wnt2ba (ENSSAUG00010019711) CTTNBP2NL (ENSSAUG00010019714) KCND3 (ENSSAUG00010019718) INKA2 (ENSSAUG00010019724) ENSSAUG00010019728 Tim17A (ENSSAUG00010019755) LMOD1 (ENSSAUG00010019757) shisa4 (ENSSAUG00010019759) ipo9 (ENSSAUG00010019778) GNAS (ENSSAUG00010020708) ENSSAUG00010021276 prelid3b (ENSSAUG00010021278) aurka (ENSSAUG00010021279) #22 slc32a1 (ENSSAUG00010021281) ENSSAUG00010021285 PPP1R16B (ENSSAUG00010021293) fam210b (ENSSAUG00010021307) #23 NDUFA4L2 (ENSSAUG00010021308) shmt2 (ENSSAUG00010021330) NXPH4 (ENSSAUG00010022698) STAC3 (ENSSAUG00010022700) R3HDM2 (ENSSAUG00010022718) INHBC (ENSSAUG00010023578) gli1 (ENSSAUG00010023582) ENSSAUG00010023585 ARHGAP9 (ENSSAUG00010023588) mars1 (ENSSAUG00010023606) ddit3 (ENSSAUG00010024012) Perciformes ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Cottioidei ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b Lumpfish MODERN SPECIES 20 SNTA1 (ENSCLMG00005000798) tox2 (ENSCLMG00005000794) st7l (ENSCLMG00005000309) wnt2ba (ENSCLMG00005000250) CTTNBP2NL (ENSCLMG00005000191) KCND3 (ENSCLMG00005000170) INKA2 (ENSCLMG00005000157) ENSCLMG00005000141 timm17a (ENSCLMG00005000122) LMOD1 (ENSCLMG00005000108) shisa4 (ENSCLMG00005000080) ipo9 (ENSCLMG00005013404) GNAS (ENSCLMG00005013240) ENSCLMG00005013212 prelid3b (ENSCLMG00005013194) aurka (ENSCLMG00005013193) #22 slc32a1 (ENSCLMG00005013192) ENSCLMG00005013189 PPP1R16B (ENSCLMG00005013185) fam210b (ENSCLMG00005013181) #23 NDUFA4L2 (ENSCLMG00005013179) shmt2 (ENSCLMG00005012306) NXPH4 (ENSCLMG00005012302) R3HDM2 (ENSCLMG00005009172) INHBC (ENSCLMG00005009143) gli1 (ENSCLMG00005009139) ARHGAP9 (ENSCLMG00005009138) mars1 (ENSCLMG00005009111) ddit3 (ENSCLMG00005009109) dctn2 (ENSCLMG00005009100) KIF5A (ENSCLMG00005008553) Stickleback MODERN SPECIES 17 SNTA1 (ENSGACG00000006083) tox2 (ENSGACG00000006088) st7l (ENSGACG00000006093) wnt2ba (ENSGACG00000006111) CTTNBP2NL (ENSGACG00000006115) KCND3 (ENSGACG00000006124) INKA2 (ENSGACG00000006147) rap1ab (ENSGACG00000006153) timm17a (ENSGACG00000006187) LMOD1 (ENSGACG00000006223) shisa4 (ENSGACG00000006225) ipo9 (ENSGACG00000006233) GNAS (ENSGACG00000006249) tubb1 (ENSGACG00000006306) prelid3b (ENSGACG00000006335) aurka (ENSGACG00000006354) #22 slc32a1 (ENSGACG00000006379) ARHGAP40 (ENSGACG00000006383) PPP1R16B (ENSGACG00000006396) fam210b (ENSGACG00000006399) #23 NDUFA4L2 (ENSGACG00000006403) shmt2 (ENSGACG00000006410) ENSGACG00000006437 NXPH4 (ENSGACG00000006441) R3HDM2 (ENSGACG00000006442) INHBC (ENSGACG00000006454) ENSGACG00000006456 gli1 (ENSGACG00000006458) ARHGAP9 (ENSGACG00000006466) mars1 (ENSGACG00000006474) ENSGACG00000006480 Perciformes_a ANCESTRAL SPECIES 5 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Channel bull blenny MODERN SPECIES 19 SNTA1 (ENSCGOG00000016765) tox2 (ENSCGOG00000016757) st7l (ENSCGOG00000015612) wnt2ba (ENSCGOG00000015569) CTTNBP2NL (ENSCGOG00000015562) KCND3 (ENSCGOG00000015548) INKA2 (ENSCGOG00000015546) rap1ab (ENSCGOG00000015372) timm17a (ENSCGOG00000015367) LMOD1 (ENSCGOG00000015366) shisa4 (ENSCGOG00000015365) ipo9 (ENSCGOG00000014708) ENSCGOG00000013273 ENSCGOG00000013226 prelid3b (ENSCGOG00000013223) aurka (ENSCGOG00000013220) #22 slc32a1 (ENSCGOG00000013219) ARHGAP40 (ENSCGOG00000013199) PPP1R16B (ENSCGOG00000013096) fam210b (ENSCGOG00000013094) #23 NDUFA4L2 (ENSCGOG00000013093) shmt2 (ENSCGOG00000012216) NXPH4 (ENSCGOG00000012188) ENSCGOG00000012169 R3HDM2 (ENSCGOG00000010804) INHBC (ENSCGOG00000010778) gli1 (ENSCGOG00000010770) ENSCGOG00000010767 ARHGAP9 (ENSCGOG00000010754) mars1 (ENSCGOG00000008998) ddit3 (ENSCGOG00000010752) Pike perch MODERN SPECIES 17 st7l (ENSSLUG00000000356) wnt2ba (ENSSLUG00000000283) CTTNBP2NL (ENSSLUG00000000276) KCND3 (ENSSLUG00000000267) ENSSLUG00000000262 ENSSLUG00000022900 timm17a (ENSSLUG00000022894) LMOD1 (ENSSLUG00000022891) shisa4 (ENSSLUG00000022888) ipo9 (ENSSLUG00000022874) ENSSLUG00000022856 ENSSLUG00000022844 GNAS (ENSSLUG00000022470) tubb1 (ENSSLUG00000022418) prelid3b (ENSSLUG00000022398) aurka (ENSSLUG00000022392) #22 slc32a1 (ENSSLUG00000022388) ENSSLUG00000022378 ENSSLUG00000022366 PPP1R16B (ENSSLUG00000022333) fam210b (ENSSLUG00000022322) #23 NDUFA4L2 (ENSSLUG00000022317) shmt2 (ENSSLUG00000021526) NXPH4 (ENSSLUG00000021491) STAC3 (ENSSLUG00000021477) R3HDM2 (ENSSLUG00000020831) INHBC (ENSSLUG00000020798) gli1 (ENSSLUG00000020778) ENSSLUG00000020773 ARHGAP9 (ENSSLUG00000020770) mars1 (ENSSLUG00000020616) Ballan wrasse MODERN SPECIES 92 INKA2 (ENSLBEG00000012309) rap1ab (ENSLBEG00000012341) timm17a (ENSLBEG00000012379) LMOD1 (ENSLBEG00000012408) shisa4 (ENSLBEG00000012422) ipo9 (ENSLBEG00000012471) GNAS (ENSLBEG00000012570) ENSLBEG00000012606 prelid3b (ENSLBEG00000012638) aurka (ENSLBEG00000012718) #22 slc32a1 (ENSLBEG00000012739) ENSLBEG00000012773 PPP1R16B (ENSLBEG00000012858) fam210b (ENSLBEG00000012887) #23 NDUFA4L2 (ENSLBEG00000012899) shmt2 (ENSLBEG00000012928) NXPH4 (ENSLBEG00000012974) STAC3 (ENSLBEG00000013000) R3HDM2 (ENSLBEG00000013115) INHBC (ENSLBEG00000013285) gli1 (ENSLBEG00000013301) ENSLBEG00000013336 ARHGAP9 (ENSLBEG00000013413) mars1 (ENSLBEG00000013609) ddit3 (ENSLBEG00000013715) Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00390000011581.d ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000156862.y ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00940000168625 ENSGT00950000182860.a.b.a ENSGT00550000075017 Fugu MODERN SPECIES 10 st7l (ENSTRUG00000012482) wnt2ba (ENSTRUG00000012568) CTTNBP2NL (ENSTRUG00000021985) KCND3 (ENSTRUG00000012622) INKA2 (ENSTRUG00000030122) ift52 (ENSTRUG00000012705) ENSTRUG00000029605 timm17a (ENSTRUG00000012814) ENSTRUG00000012733 LMOD1 (ENSTRUG00000012878) shisa4 (ENSTRUG00000022506) ipo9 (ENSTRUG00000012941) GNAS (ENSTRUG00000013102) tubb1 (ENSTRUG00000013246) prelid3b (ENSTRUG00000013297) aurka (ENSTRUG00000013307) #22 ARHGAP40 (ENSTRUG00000013408) PPP1R16B (ENSTRUG00000014686) fam210b (ENSTRUG00000024560) #23 NDUFA4L2 (ENSTRUG00000014749) shmt2 (ENSTRUG00000014754) NXPH4 (ENSTRUG00000014853) ENSTRUG00000032729 ENSTRUG00000029960 ENSTRUG00000026335 ENSTRUG00000032341 ENSTRUG00000031035 ENSTRUG00000027106 ENSTRUG00000027357 ENSTRUG00000032090 ENSTRUG00000030505 Tetraodon MODERN SPECIES 2 wnt2ba (ENSTNIG00000007035) CTTNBP2NL (ENSTNIG00000007036) ENSTNIG00000000525 KCND3 (ENSTNIG00000007037) INKA2 (ENSTNIG00000007038) ift52 (ENSTNIG00000007039) ENSTNIG00000007040 timm17a (ENSTNIG00000007041) LMOD1 (ENSTNIG00000007042) shisa4 (ENSTNIG00000007043) ipo9 (ENSTNIG00000007044) ENSTNIG00000000002 GNAS (ENSTNIG00000007045) tubb1 (ENSTNIG00000007046) prelid3b (ENSTNIG00000007047) aurka (ENSTNIG00000007048) #22 slc32a1 (ENSTNIG00000007049) ENSTNIG00000007050 ENSTNIG00000007051 fam210b (ENSTNIG00000007052) #23 NDUFA4L2 (ENSTNIG00000007053) shmt2 (ENSTNIG00000007054) ENSTNIG00000000152 ENSTNIG00000007055 STAC3 (ENSTNIG00000007056) R3HDM2 (ENSTNIG00000007057) INHBC (ENSTNIG00000001714) gli1 (ENSTNIG00000007058) ARHGAP9 (ENSTNIG00000007059) mars1 (ENSTNIG00000007060) dctn2 (ENSTNIG00000007061) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Pomacentridae ANCESTRAL SPECIES 3 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Bicolor damselfish MODERN SPECIES 631 aurka (ENSSPAG00000021494) #22 slc32a1 (ENSSPAG00000021519) ENSSPAG00000021534 PPP1R16B (ENSSPAG00000021558) ENSSPAG00000021566 fam210b (ENSSPAG00000021580) #23 NDUFA4L2 (ENSSPAG00000021586) shmt2 (ENSSPAG00000021597) NXPH4 (ENSSPAG00000021639) Pomacentridae_A ANCESTRAL SPECIES 38 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Spiny chromis MODERN SPECIES 2 tox2 (ENSAPOG00000000847) st7l (ENSAPOG00000021262) wnt2ba (ENSAPOG00000021199) CTTNBP2NL (ENSAPOG00000021157) KCND3 (ENSAPOG00000021043) INKA2 (ENSAPOG00000020995) ENSAPOG00000020980 ENSAPOG00000020963 timm17a (ENSAPOG00000020923) LMOD1 (ENSAPOG00000020896) shisa4 (ENSAPOG00000000594) ipo9 (ENSAPOG00000020880) GNAS (ENSAPOG00000020789) ENSAPOG00000020733 prelid3b (ENSAPOG00000020710) aurka (ENSAPOG00000020667) #22 slc32a1 (ENSAPOG00000020624) ENSAPOG00000020607 PPP1R16B (ENSAPOG00000020597) ENSAPOG00000020559 ENSAPOG00000020522 #23 NDUFA4L2 (ENSAPOG00000020508) shmt2 (ENSAPOG00000020482) NXPH4 (ENSAPOG00000020416) STAC3 (ENSAPOG00000020406) R3HDM2 (ENSAPOG00000020341) INHBC (ENSAPOG00000020292) gli1 (ENSAPOG00000020275) ENSAPOG00000020264 ARHGAP9 (ENSAPOG00000020261) mars1 (ENSAPOG00000020238) Amphiprion ANCESTRAL SPECIES 57 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Clown anemonefish MODERN SPECIES 2611 ENSAOCG00000006842 timm17a (ENSAOCG00000006869) LMOD1 (ENSAOCG00000006878) shisa4 (ENSAOCG00000006890) ipo9 (ENSAOCG00000000358) GNAS (ENSAOCG00000007024) ENSAOCG00000007034 prelid3b (ENSAOCG00000007055) aurka (ENSAOCG00000007078) #22 slc32a1 (ENSAOCG00000007091) lpl (ENSAOCG00000007103) Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 20 CDH22 (ENSAPEG00000010097) apoda.1 (ENSAPEG00000010066) st7l (ENSAPEG00000009999) wnt2ba (ENSAPEG00000009963) CTTNBP2NL (ENSAPEG00000009900) KCND3 (ENSAPEG00000009870) INKA2 (ENSAPEG00000009864) ENSAPEG00000009844 timm17a (ENSAPEG00000009813) LMOD1 (ENSAPEG00000009800) shisa4 (ENSAPEG00000009790) ipo9 (ENSAPEG00000009684) GNAS (ENSAPEG00000009634) ENSAPEG00000009615 prelid3b (ENSAPEG00000009602) aurka (ENSAPEG00000009393) #22 slc32a1 (ENSAPEG00000009374) ENSAPEG00000009319 atp2b4 (ENSAPEG00000009252) PPP1R16B (ENSAPEG00000009200) fam210b (ENSAPEG00000009193) #23 NDUFA4L2 (ENSAPEG00000009178) shmt2 (ENSAPEG00000009123) NXPH4 (ENSAPEG00000009115) STAC3 (ENSAPEG00000009012) R3HDM2 (ENSAPEG00000008851) INHBC (ENSAPEG00000008825) gli1 (ENSAPEG00000008774) ARHGAP9 (ENSAPEG00000008745) mars1 (ENSAPEG00000008610) ddit3 (ENSAPEG00000008725) Orange clownfish MODERN SPECIES 12 ablim1a (ENSAPEG00000024443) ENSAPEG00000024475 ENSAPEG00000024479 ENSAPEG00000024488 ENSAPEG00000024490 ALDH18A1 (ENSAPEG00000024497) ATE1 (ENSAPEG00000024510) fgfr2 (ENSAPEG00000024530) wdr11 (ENSAPEG00000024565) PLPP4 (ENSAPEG00000024583) cdh23 (ENSAPEG00000024593) ENSAPEG00000024608 vsir (ENSAPEG00000024613) eif3s6ip (ENSAPEG00000024616) SMOC2 (ENSAPEG00000024621) ENSAPEG00000024628 #22 dact2 (ENSAPEG00000024630) lrrfip2 (ENSAPEG00000024638) mlh1 (ENSAPEG00000024659) ENSAPEG00000024662 ENSAPEG00000024664 HERC4 (ENSAPEG00000024667) cox5b2 (ENSAPEG00000024672) dnajc12 (ENSAPEG00000024691) SIRT1 (ENSAPEG00000024694) dnajc12 (ENSAPEG00000024706) SIRT1 (ENSAPEG00000024712) CACUL1 (ENSAPEG00000024718) ENSAPEG00000024725 MYPN (ENSAPEG00000024730) atoh7 (ENSAPEG00000024735) Cichlidae ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Haplochromini ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Burton s mouthbrooder MODERN SPECIES 379 SNTA1 (ENSHBUG00000008360) tox2 (ENSHBUG00000008408) st7l (ENSHBUG00000008509) wnt2ba (ENSHBUG00000008538) CTTNBP2NL (ENSHBUG00000008548) KCND3 (ENSHBUG00000008689) INKA2 (ENSHBUG00000008704) ENSHBUG00000008741 timm17a (ENSHBUG00000008770) LMOD1 (ENSHBUG00000000221) shisa4 (ENSHBUG00000008786) ipo9 (ENSHBUG00000008849) ENSHBUG00000008870 prelid3b (ENSHBUG00000008888) GNAS (ENSHBUG00000008915) aurka (ENSHBUG00000008994) #22 slc32a1 (ENSHBUG00000009015) ENSHBUG00000009062 PPP1R16B (ENSHBUG00000009098) fam210b (ENSHBUG00000009104) #23 ENSHBUG00000009127 shmt2 (ENSHBUG00000009182) NXPH4 (ENSHBUG00000009189) R3HDM2 (ENSHBUG00000009227) INHBC (ENSHBUG00000009251) gli1 (ENSHBUG00000009262) ENSHBUG00000009297 ARHGAP9 (ENSHBUG00000009337) mars1 (ENSHBUG00000009575) ddit3 (ENSHBUG00000009592) dctn2 (ENSHBUG00000009631) Haplochromini_A ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Zebra mbuna MODERN SPECIES 1108 SNTA1 (ENSMZEG00005005431) tox2 (ENSMZEG00005005462) st7l (ENSMZEG00005005492) wnt2ba (ENSMZEG00005005533) CTTNBP2NL (ENSMZEG00005005546) KCND3 (ENSMZEG00005005553) INKA2 (ENSMZEG00005005566) ENSMZEG00005005574 timm17a (ENSMZEG00005005591) LMOD1 (ENSMZEG00005005597) shisa4 (ENSMZEG00005005601) ipo9 (ENSMZEG00005005610) GNAS (ENSMZEG00005005634) ENSMZEG00005005670 prelid3b (ENSMZEG00005006164) aurka (ENSMZEG00005006183) #22 slc32a1 (ENSMZEG00005006194) ENSMZEG00005006214 PPP1R16B (ENSMZEG00005006259) fam210b (ENSMZEG00005006292) #23 NDUFA4L2 (ENSMZEG00005006299) shmt2 (ENSMZEG00005006310) NXPH4 (ENSMZEG00005006329) ITGA7 (ENSMZEG00005006353) npffl (ENSMZEG00005006408) PPP1R1A (ENSMZEG00005006416) ENSMZEG00005006434 nckap1l (ENSMZEG00005006480) COL2A1 (ENSMZEG00005006568) ENSMZEG00005006602 myg1 (ENSMZEG00005006620) Eastern happy MODERN SPECIES 17 SNTA1 (ENSACLG00000020269) tox2 (ENSACLG00000020146) st7l (ENSACLG00000020077) wnt2ba (ENSACLG00000020056) CTTNBP2NL (ENSACLG00000020029) KCND3 (ENSACLG00000019983) INKA2 (ENSACLG00000019968) ENSACLG00000019927 timm17a (ENSACLG00000019907) LMOD1 (ENSACLG00000019895) shisa4 (ENSACLG00000019869) ipo9 (ENSACLG00000019807) GNAS (ENSACLG00000019781) ENSACLG00000019638 prelid3b (ENSACLG00000019614) aurka (ENSACLG00000019599) #22 ENSACLG00000019588 slc32a1 (ENSACLG00000019578) ENSACLG00000019415 PPP1R16B (ENSACLG00000019384) fam210b (ENSACLG00000019366) #23 NDUFA4L2 (ENSACLG00000019341) shmt2 (ENSACLG00000019281) NXPH4 (ENSACLG00000019253) ENSACLG00000019220 R3HDM2 (ENSACLG00000019106) INHBC (ENSACLG00000019096) gli1 (ENSACLG00000019087) ENSACLG00000019042 ARHGAP9 (ENSACLG00000018988) mars1 (ENSACLG00000018937) Lyretail cichlid MODERN SPECIES 294 cbfa2t2 (ENSNBRG00000006093) SNTA1 (ENSNBRG00000006037) tox2 (ENSNBRG00000006005) st7l (ENSNBRG00000005946) wnt2ba (ENSNBRG00000005873) CTTNBP2NL (ENSNBRG00000005830) KCND3 (ENSNBRG00000005803) ENSNBRG00000005772 timm17a (ENSNBRG00000005748) LMOD1 (ENSNBRG00000005705) shisa4 (ENSNBRG00000005691) ipo9 (ENSNBRG00000005251) GNAS (ENSNBRG00000005102) ENSNBRG00000005022 prelid3b (ENSNBRG00000005002) aurka (ENSNBRG00000004811) #22 slc32a1 (ENSNBRG00000004780) ENSNBRG00000004745 PPP1R16B (ENSNBRG00000004695) fam210b (ENSNBRG00000004682) #23 ENSNBRG00000004627 shmt2 (ENSNBRG00000004585) ENSNBRG00000004544 R3HDM2 (ENSNBRG00000004483) INHBC (ENSNBRG00000004464) gli1 (ENSNBRG00000004411) ARHGAP9 (ENSNBRG00000004187) mars1 (ENSNBRG00000004105) ddit3 (ENSNBRG00000004088) dctn2 (ENSNBRG00000004049) KIF5A (ENSNBRG00000004010) Nile tilapia MODERN SPECIES 17 SNTA1 (ENSONIG00000006790) tox2 (ENSONIG00000039601) st7l (ENSONIG00000011515) wnt2ba (ENSONIG00000012283) CTTNBP2NL (ENSONIG00000011512) KCND3 (ENSONIG00000011507) INKA2 (ENSONIG00000040005) ENSONIG00000011501 timm17a (ENSONIG00000034127) LMOD1 (ENSONIG00000034043) shisa4 (ENSONIG00000011497) ipo9 (ENSONIG00000011495) GNAS (ENSONIG00000011493) ENSONIG00000011492 prelid3b (ENSONIG00000007211) aurka (ENSONIG00000011487) #22 slc32a1 (ENSONIG00000035212) ENSONIG00000011482 PPP1R16B (ENSONIG00000029036) fam210b (ENSONIG00000039924) #23 NDUFA4L2 (ENSONIG00000042525) shmt2 (ENSONIG00000005066) NXPH4 (ENSONIG00000038466) ENSONIG00000039606 R3HDM2 (ENSONIG00000005075) INHBC (ENSONIG00000043033) gli1 (ENSONIG00000005084) ENSONIG00000005086 ARHGAP9 (ENSONIG00000005088) mars1 (ENSONIG00000005090) ddit3 (ENSONIG00000041620) Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 423 tox2 (ENSACIG00000015582) st7l (ENSACIG00000015605) wnt2ba (ENSACIG00000015642) CTTNBP2NL (ENSACIG00000015665) KCND3 (ENSACIG00000015735) INKA2 (ENSACIG00000015754) ENSACIG00000015767 timm17a (ENSACIG00000015780) LMOD1 (ENSACIG00000015796) shisa4 (ENSACIG00000015840) ipo9 (ENSACIG00000015855) GNAS (ENSACIG00000015888) ENSACIG00000015910 ENSACIG00000015917 prelid3b (ENSACIG00000015927) aurka (ENSACIG00000015943) #22 slc32a1 (ENSACIG00000015957) ENSACIG00000015967 PPP1R16B (ENSACIG00000015994) fam210b (ENSACIG00000016035) #23 ENSACIG00000016040 NDUFA4L2 (ENSACIG00000016061) shmt2 (ENSACIG00000016081) NXPH4 (ENSACIG00000016102) STAC3 (ENSACIG00000016114) R3HDM2 (ENSACIG00000016146) INHBC (ENSACIG00000016187) gli1 (ENSACIG00000016199) ARHGAP9 (ENSACIG00000016223) mars1 (ENSACIG00000016271) ddit3 (ENSACIG00000016572) Midas cichlid MODERN SPECIES 575 ENSACIG00000020945 slc25a3b (ENSACIG00000020954) tmpoa (ENSACIG00000020972) strap (ENSACIG00000020986) ENSACIG00000020999 large1 (ENSACIG00000021050) ENSACIG00000021074 braf (ENSACIG00000021084) mrps33 (ENSACIG00000021109) tmem178bb (ENSACIG00000021120) ENSACIG00000021130 mkrn1 (ENSACIG00000021136) TMEM121B (ENSACIG00000021203) ENSACIG00000021210 arhgef39 (ENSACIG00000021267) aurka (ENSACIG00000021291) #22 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Oryzias ANCESTRAL SPECIES 1 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Oryzias_b ANCESTRAL SPECIES 3 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000171242 ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00940000168625 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Indian medaka MODERN SPECIES 8 SNTA1 (ENSOMEG00000017026) tox2 (ENSOMEG00000017150) st7l (ENSOMEG00000017227) wnt2ba (ENSOMEG00000017272) CTTNBP2NL (ENSOMEG00000017321) KCND3 (ENSOMEG00000000673) INKA2 (ENSOMEG00000017386) rap1ab (ENSOMEG00000017428) timm17a (ENSOMEG00000017464) LMOD1 (ENSOMEG00000017498) shisa4 (ENSOMEG00000017517) ipo9 (ENSOMEG00000017601) GNAS (ENSOMEG00000017665) ENSOMEG00000017730 prelid3b (ENSOMEG00000017775) aurka (ENSOMEG00000017803) #22 slc32a1 (ENSOMEG00000017815) ENSOMEG00000017918 PPP1R16B (ENSOMEG00000017968) FAM210B (ENSOMEG00000017983) #23 ENSOMEG00000018002 shmt2 (ENSOMEG00000000462) NXPH4 (ENSOMEG00000018036) R3HDM2 (ENSOMEG00000018079) INHBC (ENSOMEG00000018092) gli1 (ENSOMEG00000018121) ARHGAP9 (ENSOMEG00000018225) mars1 (ENSOMEG00000018411) ddit3 (ENSOMEG00000018481) dctn2 (ENSOMEG00000018587) KIF5A (ENSOMEG00000018732) Javanese ricefish MODERN SPECIES 19 tox2 (ENSOJAG00000018644) ENSOJAG00000018686 st7l (ENSOJAG00000018696) wnt2ba (ENSOJAG00000018940) CTTNBP2NL (ENSOJAG00000018947) KCND3 (ENSOJAG00000019113) INKA2 (ENSOJAG00000019143) ENSOJAG00000019147 timm17a (ENSOJAG00000019182) ENSOJAG00000019226 shisa4 (ENSOJAG00000019244) ipo9 (ENSOJAG00000019267) GNAS (ENSOJAG00000019491) ENSOJAG00000019736 prelid3b (ENSOJAG00000019748) aurka (ENSOJAG00000019766) #22 slc32a1 (ENSOJAG00000019780) ENSOJAG00000019799 PPP1R16B (ENSOJAG00000019824) FAM210B (ENSOJAG00000019863) #23 ENSOJAG00000019865 shmt2 (ENSOJAG00000019956) NXPH4 (ENSOJAG00000020641) R3HDM2 (ENSOJAG00000020705) INHBC (ENSOJAG00000000096) gli1 (ENSOJAG00000000155) ENSOJAG00000000180 ARHGAP9 (ENSOJAG00000000275) mars1 (ENSOJAG00000000451) ddit3 (ENSOJAG00000000630) dctn2 (ENSOJAG00000000710) Oryzias_a ANCESTRAL SPECIES 5 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Chinese medaka MODERN SPECIES 1091 INKA2 (ENSOSIG00000021470) rap1ab (ENSOSIG00000021476) timm17a (ENSOSIG00000021483) LMOD1 (ENSOSIG00000021486) shisa4 (ENSOSIG00000021487) ipo9 (ENSOSIG00000021502) ENSOSIG00000021522 ENSOSIG00000021523 prelid3b (ENSOSIG00000021527) aurka (ENSOSIG00000021531) #22 slc32a1 (ENSOSIG00000021532) ENSOSIG00000021534 PPP1R16B (ENSOSIG00000021537) fam210b (ENSOSIG00000021541) #23 shmt2 (ENSOSIG00000021631) NXPH4 (ENSOSIG00000022484) R3HDM2 (ENSOSIG00000022556) INHBC (ENSOSIG00000022764) gli1 (ENSOSIG00000022766) ENSOSIG00000022767 ARHGAP9 (ENSOSIG00000022778) mars1 (ENSOSIG00000022843) ddit3 (ENSOSIG00000023066) dctn2 (ENSOSIG00000023070) KIF5A (ENSOSIG00000023147) Japanese Medaka HdrR MODERN SPECIES 19 SNTA1 (ENSORLG00000005966) tox2 (ENSORLG00000005944) st7l (ENSORLG00000005920) wnt2ba (ENSORLG00000005880) CTTNBP2NL (ENSORLG00000005859) KCND3 (ENSORLG00000005848) INKA2 (ENSORLG00000028015) rap1ab (ENSORLG00000005814) timm17a (ENSORLG00000022383) LMOD1 (ENSORLG00000005777) shisa4 (ENSORLG00000005773) ipo9 (ENSORLG00000005758) ENSORLG00000005722 ENSORLG00000027123 prelid3b (ENSORLG00000005656) aurka (ENSORLG00000005631) #22 slc32a1 (ENSORLG00000005623) ENSORLG00000005618 PPP1R16B (ENSORLG00000005566) ENSORLG00000026622 fam210b (ENSORLG00000026881) #23 NDUFA4L2 (ENSORLG00000005542) shmt2 (ENSORLG00000005536) NXPH4 (ENSORLG00000028376) ENSORLG00000026255 R3HDM2 (ENSORLG00000005502) INHBC (ENSORLG00000005461) gli1 (ENSORLG00000005455) ENSORLG00000024860 ARHGAP9 (ENSORLG00000005431) mars1 (ENSORLG00000005405) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Mangrove rivulus MODERN SPECIES 11 SNTA1 (ENSKMAG00000013690) tox2 (ENSKMAG00000013666) st7l (ENSKMAG00000013608) wnt2ba (ENSKMAG00000013565) CTTNBP2NL (ENSKMAG00000013548) KCND3 (ENSKMAG00000013514) INKA2 (ENSKMAG00000013505) rap1ab (ENSKMAG00000013480) timm17a (ENSKMAG00000013455) LMOD1 (ENSKMAG00000013439) shisa4 (ENSKMAG00000013426) ipo9 (ENSKMAG00000013352) GNAS (ENSKMAG00000013306) ENSKMAG00000013126 prelid3b (ENSKMAG00000013055) aurka (ENSKMAG00000013017) #22 slc32a1 (ENSKMAG00000012998) ENSKMAG00000012927 PPP1R16B (ENSKMAG00000012884) fam210b (ENSKMAG00000012861) #23 NDUFA4L2 (ENSKMAG00000012841) shmt2 (ENSKMAG00000012809) NXPH4 (ENSKMAG00000012792) R3HDM2 (ENSKMAG00000012695) INHBC (ENSKMAG00000012645) gli1 (ENSKMAG00000012625) ENSKMAG00000012606 ARHGAP9 (ENSKMAG00000012550) ddit3 (ENSKMAG00000012519) mars1 (ENSKMAG00000012408) dctn2 (ENSKMAG00000012341) Turquoise killifish MODERN SPECIES 1619 TOX2 (ENSNFUG00015023136) st7l (ENSNFUG00015022943) WNT2BA (ENSNFUG00015022923) CTTNBP2NL (ENSNFUG00015022919) ENSNFUG00015022913 KCND3 (ENSNFUG00015022902) FAM212B (ENSNFUG00015022898) rap1ab (ENSNFUG00015022892) timm17a (ENSNFUG00015022888) CR628365.1 (ENSNFUG00015022881) shisa4 (ENSNFUG00015022877) ipo9 (ENSNFUG00015022807) ENSNFUG00015022784 Nfu_g_1_020961 (ENSNFUG00015022592) prelid3b (ENSNFUG00015022559) aurka (ENSNFUG00015022558) #22 slc32a1 (ENSNFUG00015022555) ARHGAP40 (ENSNFUG00015022546) ENSNFUG00015022537 ENSNFUG00015022535 PPP1R16B (ENSNFUG00015022534) FAM210B (ENSNFUG00015022530) #23 NDUFA4L2 (ENSNFUG00015022527) SHMT2 (ENSNFUG00015021511) NXPH4 (ENSNFUG00015021455) ENSNFUG00015021452 R3HDM2 (ENSNFUG00015020683) ENSNFUG00015020650 INHBC (ENSNFUG00015020646) gli1 (ENSNFUG00015020631) ENSNFUG00015020623 Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Poecilia ANCESTRAL SPECIES 23 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 NAME_6 ANCESTRAL SPECIES 7 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Amazon molly MODERN SPECIES 254 SNTA1 (ENSPFOG00000003151) tox2 (ENSPFOG00000003305) st7l (ENSPFOG00000003534) wnt2ba (ENSPFOG00000003624) CTTNBP2NL (ENSPFOG00000003693) KCND3 (ENSPFOG00000003837) INKA2 (ENSPFOG00000003848) rap1ab (ENSPFOG00000003908) timm17a (ENSPFOG00000004005) LMOD1 (ENSPFOG00000004029) shisa4 (ENSPFOG00000022821) ipo9 (ENSPFOG00000004346) GNAS (ENSPFOG00000004527) tubb1 (ENSPFOG00000004579) prelid3b (ENSPFOG00000004673) aurka (ENSPFOG00000004761) #22 slc32a1 (ENSPFOG00000004785) ARHGAP40 (ENSPFOG00000005022) PPP1R16B (ENSPFOG00000005228) fam210b (ENSPFOG00000005251) #23 NDUFA4L2 (ENSPFOG00000005259) shmt2 (ENSPFOG00000005424) NXPH4 (ENSPFOG00000005433) R3HDM2 (ENSPFOG00000006077) INHBC (ENSPFOG00000006113) gli1 (ENSPFOG00000006269) ENSPFOG00000006375 ARHGAP9 (ENSPFOG00000006700) mars1 (ENSPFOG00000006998) ddit3 (ENSPFOG00000007011) dctn2 (ENSPFOG00000007143) Sailfin molly MODERN SPECIES 1722 LMOD1 (ENSPLAG00000012883) shisa4 (ENSPLAG00000012876) ipo9 (ENSPLAG00000012867) GNAS (ENSPLAG00000012773) prelid3b (ENSPLAG00000012731) aurka (ENSPLAG00000012706) #22 slc32a1 (ENSPLAG00000012667) Guppy MODERN SPECIES 457 tox2 (ENSPREG00000009327) st7l (ENSPREG00000009286) wnt2ba (ENSPREG00000009263) CTTNBP2NL (ENSPREG00000009234) KCND3 (ENSPREG00000009190) INKA2 (ENSPREG00000009168) rap1ab (ENSPREG00000009158) ENSPREG00000009105 LMOD1 (ENSPREG00000009093) shisa4 (ENSPREG00000009085) ipo9 (ENSPREG00000008970) GNAS (ENSPREG00000008899) ENSPREG00000008885 ENSPREG00000008878 prelid3b (ENSPREG00000008857) aurka (ENSPREG00000008806) #22 slc32a1 (ENSPREG00000008781) ARHGAP40 (ENSPREG00000008695) PPP1R16B (ENSPREG00000008673) fam210b (ENSPREG00000008662) #23 NDUFA4L2 (ENSPREG00000008652) shmt2 (ENSPREG00000008598) NXPH4 (ENSPREG00000008585) R3HDM2 (ENSPREG00000008424) INHBC (ENSPREG00000008347) gli1 (ENSPREG00000008295) ENSPREG00000008270 ARHGAP9 (ENSPREG00000008228) ddit3 (ENSPREG00000008197) mars1 (ENSPREG00000008123) dctn2 (ENSPREG00000008030) Platyfish MODERN SPECIES 12 SNTA1 (ENSXMAG00000023046) tox2 (ENSXMAG00000005925) st7l (ENSXMAG00000005934) wnt2ba (ENSXMAG00000005971) CTTNBP2NL (ENSXMAG00000023248) KCND3 (ENSXMAG00000019946) INKA2 (ENSXMAG00000029540) rap1ab (ENSXMAG00000005986) timm17a (ENSXMAG00000025518) LMOD1 (ENSXMAG00000006007) shisa4 (ENSXMAG00000006012) ipo9 (ENSXMAG00000006013) GNAS (ENSXMAG00000021862) ENSXMAG00000026750 prelid3b (ENSXMAG00000006052) aurka (ENSXMAG00000006069) #22 slc32a1 (ENSXMAG00000029858) ENSXMAG00000006086 ENSXMAG00000022069 ENSXMAG00000027745 PPP1R16B (ENSXMAG00000006109) fam210b (ENSXMAG00000006119) #23 NDUFA4L2 (ENSXMAG00000023926) ENSXMAG00000021132 shmt2 (ENSXMAG00000006123) NXPH4 (ENSXMAG00000006151) R3HDM2 (ENSXMAG00000017978) INHBC (ENSXMAG00000023740) gli1 (ENSXMAG00000026676) ENSXMAG00000017955 ARHGAP9 (ENSXMAG00000017939) NAME_4 ANCESTRAL SPECIES 14 ENSGT00950000182863.A.a.b ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 Sheepshead minnow MODERN SPECIES 146 tox2 (ENSCVAG00000008507) st7l (ENSCVAG00000008564) wnt2ba (ENSCVAG00000008580) CTTNBP2NL (ENSCVAG00000008589) KCND3 (ENSCVAG00000008603) INKA2 (ENSCVAG00000008608) ENSCVAG00000008628 timm17a (ENSCVAG00000008657) LMOD1 (ENSCVAG00000008675) shisa4 (ENSCVAG00000008722) ipo9 (ENSCVAG00000008811) GNAS (ENSCVAG00000008844) ENSCVAG00000008856 prelid3b (ENSCVAG00000008866) aurka (ENSCVAG00000008888) #22 slc32a1 (ENSCVAG00000008898) ARHGAP40 (ENSCVAG00000008907) PPP1R16B (ENSCVAG00000008916) fam210b (ENSCVAG00000008921) #23 NDUFA4L2 (ENSCVAG00000008937) shmt2 (ENSCVAG00000008971) NXPH4 (ENSCVAG00000008977) R3HDM2 (ENSCVAG00000009058) INHBC (ENSCVAG00000009072) gli1 (ENSCVAG00000009092) ENSCVAG00000009111 ARHGAP9 (ENSCVAG00000009264) mars1 (ENSCVAG00000009314) ddit3 (ENSCVAG00000009326) dctn2 (ENSCVAG00000009660) Mummichog DUPLICATION Mummichog MODERN SPECIES 2369 SNTA1 (ENSFHEG00000016832) tox2 (ENSFHEG00000016824) st7l (ENSFHEG00000016735) wnt2ba (ENSFHEG00000016647) CTTNBP2NL (ENSFHEG00000016629) KCND3 (ENSFHEG00000000417) INKA2 (ENSFHEG00000016594) ENSFHEG00000000416 timm17a (ENSFHEG00000016582) LMOD1 (ENSFHEG00000016560) shisa4 (ENSFHEG00000016553) ipo9 (ENSFHEG00000016546) GNAS (ENSFHEG00000016449) ENSFHEG00000016409 prelid3b (ENSFHEG00000000792) aurka (ENSFHEG00000016394) #22 slc32a1 (ENSFHEG00000016291) ENSFHEG00000016273 PPP1R16B (ENSFHEG00000016239) FAM210B (ENSFHEG00000016227) #23 ENSFHEG00000016218 Mummichog MODERN SPECIES 333 ENSFHEG00000002449 lrrc4.2 (ENSFHEG00000002418) aurka (ENSFHEG00000002401) #22 ENSFHEG00000002279 ENSFHEG00000002268 ENSFHEG00000002250 frmd4a (ENSFHEG00000000831) si:dkey-30c15.13 (ENSFHEG00000002219) ENSFHEG00000002207 pdp2 (ENSFHEG00000002197) ENSFHEG00000002152 ENSFHEG00000002139 Tiger tail seahorse MODERN SPECIES 516 ENSHCOG00000001346 nckap1l (ENSHCOG00000001334) ENSHCOG00000001290 ENSHCOG00000001271 npffl (ENSHCOG00000001267) hyal1 (ENSHCOG00000001265) HYAL2 (ENSHCOG00000001262) tusc2a (ENSHCOG00000001259) RASSF1 (ENSHCOG00000001251) zmynd10 (ENSHCOG00000001244) nprl2 (ENSHCOG00000001232) hemk1 (ENSHCOG00000001225) cish (ENSHCOG00000001216) twf2a (ENSHCOG00000001210) wdr82 (ENSHCOG00000001204) aurka (ENSHCOG00000001197) #22 slc32a1 (ENSHCOG00000001194) slc32a1 (ENSHCOG00000001191) ARHGAP40 (ENSHCOG00000001187) PPP1R16B (ENSHCOG00000001179) ENSHCOG00000001172 #23 shmt2 (ENSHCOG00000001169) NXPH4 (ENSHCOG00000001158) STAC3 (ENSHCOG00000001152) R3HDM2 (ENSHCOG00000001142) INHBC (ENSHCOG00000001128) gli1 (ENSHCOG00000001116) ENSHCOG00000001104 ARHGAP9 (ENSHCOG00000001098) mars1 (ENSHCOG00000001090) ddit3 (ENSHCOG00000001079) Pinecone sodierfish MODERN SPECIES 19 cbfa2t2 (ENSMMDG00005011384) SNTA1 (ENSMMDG00005011334) tox2 (ENSMMDG00005011331) st7l (ENSMMDG00005010788) wnt2ba (ENSMMDG00005010772) CTTNBP2NL (ENSMMDG00005010766) KCND3 (ENSMMDG00005010757) INKA2 (ENSMMDG00005010756) ENSMMDG00005010741 timm17a (ENSMMDG00005010734) LMOD1 (ENSMMDG00005010731) shisa4 (ENSMMDG00005010729) ipo9 (ENSMMDG00005010677) TUBB1 (ENSMMDG00005010661) prelid3b (ENSMMDG00005010660) aurka (ENSMMDG00005010658) #22 slc32a1 (ENSMMDG00005010656) ARHGAP40 (ENSMMDG00005010652) PPP1R16B (ENSMMDG00005010646) fam210b (ENSMMDG00005010644) #23 NDUFA4L2 (ENSMMDG00005010642) shmt2 (ENSMMDG00005007800) NXPH4 (ENSMMDG00005007781) STAC3 (ENSMMDG00005007779) R3HDM2 (ENSMMDG00005005987) INHBC (ENSMMDG00005005954) gli1 (ENSMMDG00005005946) ARHGAP9 (ENSMMDG00005005932) ddit3 (ENSMMDG00005005924) mars1 (ENSMMDG00005005377) dctn2 (ENSMMDG00005005252) Cod MODERN SPECIES 4 SNTA1 (ENSGMOG00000000801) tox2 (ENSGMOG00000000815) st7l (ENSGMOG00000007834) ENSGMOG00000030126 CTTNBP2NL (ENSGMOG00000007846) KCND3 (ENSGMOG00000007849) INKA2 (ENSGMOG00000022329) ENSGMOG00000007859 timm17a (ENSGMOG00000007865) ENSGMOG00000036519 shisa4 (ENSGMOG00000007879) ipo9 (ENSGMOG00000007883) ENSGMOG00000007896 ENSGMOG00000027552 prelid3b (ENSGMOG00000007909) ENSGMOG00000007912 #22 slc32a1 (ENSGMOG00000035092) ENSGMOG00000007921 ENSGMOG00000007929 fam210b (ENSGMOG00000007942) #23 shmt2 (ENSGMOG00000007949) NDUFA4L2 (ENSGMOG00000007946) ENSGMOG00000025210 STAC3 (ENSGMOG00000007958) R3HDM2 (ENSGMOG00000007961) INHBC (ENSGMOG00000029392) gli1 (ENSGMOG00000007975) ENSGMOG00000036108 ARHGAP9 (ENSGMOG00000007982) mars1 (ENSGMOG00000007987) ddit3 (ENSGMOG00000031028) Protacanthopterygii ANCESTRAL SPECIES 98 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b Salmoninae ANCESTRAL SPECIES 101 ENSGT00940000155325.a.b.a.c.b ENSGT00390000000911.h.b.j ENSGT01050000244971.B.a ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ENSGT00950000182860.a.b.a.f ENSGT00550000075017.f ENSGT00550000075017.e.a Salmoninae_a ANCESTRAL SPECIES 29 ENSGT01030000234555.a.a.b.a.a.a.b.o ENSGT00940000155264.g ENSGT00990000203541.a.a.b.h.g.b ENSGT00940000159650.f ENSGT00940000156194.m.b.c.b ENSGT00940000169818 ENSGT00940000162229.f ENSGT00940000162196.d.b ENSGT00940000155325.a.b.a.c.b ENSGT00390000000911.h.b.j ENSGT01050000244971.B.a ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ENSGT00950000182860.a.b.a.f ENSGT00550000075017.f ENSGT00390000006305.n Salmo ANCESTRAL SPECIES 33 ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b ENSGT01030000234555.a.a.b.a.a.a.b.o ENSGT00940000155264.g ENSGT00990000203541.a.a.b.h.g.b ENSGT00940000159650.f ENSGT00940000156194.m.b.c.a.b ENSGT00970000193995.a.a ENSGT00940000162229.f ENSGT00940000162196.d.b ENSGT00940000155325.a.b.a.c.b ENSGT00390000000911.h.b.j ENSGT01050000244971.B.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b.a ENSGT00950000182860.a.b.a.f ENSGT00550000075017.e.a ENSGT00390000006305.n River trout MODERN SPECIES 5 ENSSTUG00000015544 ENSSTUG00000015541 ADORA1 (ENSSTUG00000015536) srpk1b (ENSSTUG00000013555) KIF21B (ENSSTUG00000010369) cpne5b (ENSSTUG00000010141) ENSSTUG00000010132 b3galt6 (ENSSTUG00000010115) tmem167b (ENSSTUG00000010098) mapk14b (ENSSTUG00000009991) cdab (ENSSTUG00000009913) ENSSTUG00000009909 ENSSTUG00000009899 ddx19b (ENSSTUG00000009179) prelid3b (ENSSTUG00000009088) aurka (ENSSTUG00000009070) #22 slc32a1 (ENSSTUG00000009050) ARHGAP40 (ENSSTUG00000009023) PPP1R16B (ENSSTUG00000008935) fam210b (ENSSTUG00000008899) #23 ENSSTUG00000008885 shmt2 (ENSSTUG00000008201) STAC3 (ENSSTUG00000008055) R3HDM2 (ENSSTUG00000006166) INHBC (ENSSTUG00000006022) gli1 (ENSSTUG00000006004) ENSSTUG00000005974 ARHGAP9 (ENSSTUG00000005929) ENSSTUG00000005898 ENSSTUG00000005888 ENSSTUG00000005882 Atlantic salmon MODERN SPECIES 3 srpk1b (ENSSSAG00000007612) ENSSSAG00000009801 ENSSSAG00000009852 ENSSSAG00000082539 cpne5b (ENSSSAG00000088360) ENSSSAG00000058444 ENSSSAG00000086731 ca119 (ENSSSAG00000107955) ENSSSAG00000015707 ENSSSAG00000040745 ENSSSAG00000015735 ENSSSAG00000100028 ENSSSAG00000015787 ENSSSAG00000031016 ENSSSAG00000090594 ENSSSAG00000031237 #22 ENSSSAG00000092320 ENSSSAG00000094059 ENSSSAG00000031772 fam210b (ENSSSAG00000093027) #23 NDUFA4L2 (ENSSSAG00000120770) GLYM (ENSSSAG00000040078) NXPH4 (ENSSSAG00000045938) STAC3 (ENSSSAG00000045942) R3HDM2 (ENSSSAG00000045994) INHBC (ENSSSAG00000104549) gli1 (ENSSSAG00000046547) ENSSSAG00000046521 ENSSSAG00000046598 ARHGAP9 (ENSSSAG00000046609) mars1 (ENSSSAG00000046703) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b ENSGT01030000234555.a.a.b.a.a.a.b.o ENSGT00940000155264.g ENSGT00940000159650.f ENSGT00940000156194.m.b.c.b ENSGT00940000169818 ENSGT00940000162229.f ENSGT00940000162196.d.a.b ENSGT00940000155325.a.b.a.c.b ENSGT00390000000911.h.b.j ENSGT01050000244971.B.a ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ENSGT00950000182860.a.b.a.f ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b Oncorhynchus_a ANCESTRAL SPECIES 54 ENSGT00940000154308.A.a.b.a.a.b.a.a.b ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b ENSGT01030000234555.a.a.b.a.a.a.b.o ENSGT00940000155264.g ENSGT00940000159650.f ENSGT00970000193995.a.a ENSGT00940000162229.f ENSGT00940000162196.d.b ENSGT00940000155325.a.b.a.c.b ENSGT00390000000911.h.b.j ENSGT01050000244971.B.a ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ENSGT00950000182860.a.b.a.f ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b Chinook salmon MODERN SPECIES 11 ENSOTSG00005004997 ENSOTSG00005005000 ADORA1 (ENSOTSG00005005002) ENSOTSG00005005011 ENSOTSG00005005017 b3galt6 (ENSOTSG00005005020) tmem167b (ENSOTSG00005005021) mapk14b (ENSOTSG00005005030) ENSOTSG00005005084 ENSOTSG00005005085 ENSOTSG00005005086 camk2n1 (ENSOTSG00005005087) ddx19b (ENSOTSG00005005106) ENSOTSG00005007978 prelid3b (ENSOTSG00005007979) aurka (ENSOTSG00005007980) #22 slc32a1 (ENSOTSG00005007982) ENSOTSG00005007983 ENSOTSG00005000127 ENSOTSG00005000401 NDUFA4L2 (ENSOTSG00005000738) shmt2 (ENSOTSG00005000876) NXPH4 (ENSOTSG00005001081) ENSOTSG00005001086 ENSOTSG00005001093 ENSOTSG00005001103 ENSOTSG00005001106 CELA1 (ENSOTSG00005001112) CELA1 (ENSOTSG00005001148) gls2b (ENSOTSG00005002305) ENSOTSG00005002310 Coho salmon MODERN SPECIES ADORA1 (ENSOKIG00005029728) ENSOKIG00005029715 ENSOKIG00005028841 KIF21B (ENSOKIG00005028309) ENSOKIG00005028254 ENSOKIG00005028208 B3GALT6 (ENSOKIG00005028195) TMEM167B (ENSOKIG00005028190) MAPK14 (ENSOKIG00005027854) cdab (ENSOKIG00005027770) ENSOKIG00005027746 camk2n1 (ENSOKIG00005027717) ENSOKIG00005027683 ddx19b (ENSOKIG00005026862) prelid3b (ENSOKIG00005026798) aurka (ENSOKIG00005026781) #22 slc32a1 (ENSOKIG00005026758) ARHGAP40 (ENSOKIG00005026743) ENSOKIG00005026729 PPP1R16B (ENSOKIG00005026717) fam210b (ENSOKIG00005026712) #23 NDUFA4L2 (ENSOKIG00005026708) shmt2 (ENSOKIG00005026554) NXPH4 (ENSOKIG00005026535) ENSOKIG00005026530 ENSOKIG00005026523 R3HDM2 (ENSOKIG00005025940) ENSOKIG00005025861 gli1 (ENSOKIG00005025774) ENSOKIG00005025741 ARHGAP9 (ENSOKIG00005025693) Rainbow trout MODERN SPECIES 8 ARHGEF3 (ENSOMYG00000052678) ENSOMYG00000009072 CCDC66 (ENSOMYG00000009124) ENSOMYG00000009163 ENSOMYG00000009197 ENSOMYG00000009240 ENSOMYG00000009255 ENSOMYG00000057411 srpk1b (ENSOMYG00000057594) ENSOMYG00000050571 ENSOMYG00000076305 cpne5b (ENSOMYG00000067919) ENSOMYG00000009471 ENSOMYG00000061155 ENSOMYG00000009513 ENSOMYG00000009571 #22 ENSOMYG00000052742 ENSOMYG00000009643 ENSOMYG00000072693 ddx19b (ENSOMYG00000009954) ENSOMYG00000011277 ENSOMYG00000011297 ENSOMYG00000011329 ENSOMYG00000066952 ENSOMYG00000055935 fam210b (ENSOMYG00000011356) #23 NDUFA4L2 (ENSOMYG00000074259) shmt2 (ENSOMYG00000011457) NXPH4 (ENSOMYG00000013213) ENSOMYG00000013220 ENSOMYG00000069248 Huchen MODERN SPECIES 4182 mapk14b (ENSHHUG00000039175) cdab (ENSHHUG00000039181) ENSHHUG00000039190 ENSHHUG00000039201 camk2n1 (ENSHHUG00000039254) ddx19b (ENSHHUG00000039263) ENSHHUG00000039686 prelid3b (ENSHHUG00000039698) aurka (ENSHHUG00000039720) #22 slc32a1 (ENSHHUG00000039729) Northern pike MODERN SPECIES 16 mars1 (ENSELUG00000010453) ARHGAP9 (ENSELUG00000010297) ENSELUG00000010204 gli1 (ENSELUG00000010164) INHBC (ENSELUG00000026593) R3HDM2 (ENSELUG00000015969) STAC3 (ENSELUG00000015859) NXPH4 (ENSELUG00000019200) shmt2 (ENSELUG00000019224) NDUFA4L2 (ENSELUG00000019234) fam210b (ENSELUG00000019248) #23 PPP1R16B (ENSELUG00000019307) ENSELUG00000019348 slc32a1 (ENSELUG00000032744) ENSELUG00000032646 aurka (ENSELUG00000019389) #22 ENSELUG00000034488 ENSELUG00000028856 ddx19b (ENSELUG00000000838) camk2n1 (ENSELUG00000028844) ENSELUG00000000847 st3gal8 (ENSELUG00000019486) ENSELUG00000026051 ENSELUG00000028742 ENSELUG00000020441 cpne1 (ENSELUG00000020388) nfs1 (ENSELUG00000020341) rbm39a (ENSELUG00000020296) si:ch211-15p9.2 (ENSELUG00000020263) atp6ap1la (ENSELUG00000020246) ENSELUG00000020212 Otomorpha ANCESTRAL SPECIES 89 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Clupeiformes ANCESTRAL SPECIES 72 ENSGT00390000011228.b.a.e.a ENSGT00390000014429.a ENSGT00940000156378.a.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Denticle herring MODERN SPECIES 3 ATXN7 (ENSDCDG00000017336) thoc7 (ENSDCDG00000017329) SYNPR (ENSDCDG00000017325) nampt2 (ENSDCDG00000016915) ENSDCDG00000016705 fezf2 (ENSDCDG00000035324) C3orf14 (ENSDCDG00000035321) ENSDCDG00000035319 ptprga (ENSDCDG00000035017) FHIT (ENSDCDG00000034929) ENSDCDG00000034926 FAM107A (ENSDCDG00000034924) ccdc3b (ENSDCDG00000034922) CAMK1 (ENSDCDG00000034765) prelid3b (ENSDCDG00000034757) aurka (ENSDCDG00000034756) #22 slc32a1 (ENSDCDG00000034755) ARHGAP40 (ENSDCDG00000034753) PPP1R16B (ENSDCDG00000034751) fam210b (ENSDCDG00000034750) #23 NDUFA4L2 (ENSDCDG00000034749) shmt2 (ENSDCDG00000034339) NXPH4 (ENSDCDG00000034291) STAC3 (ENSDCDG00000034285) R3HDM2 (ENSDCDG00000034227) INHBC (ENSDCDG00000034210) gli1 (ENSDCDG00000034209) ENSDCDG00000034205 ENSDCDG00000034204 ARHGAP9 (ENSDCDG00000034201) mars1 (ENSDCDG00000034102) Atlantic herring MODERN SPECIES 21 ATXN7 (ENSCHAG00000026399) thoc7 (ENSCHAG00000026411) ENSCHAG00000026422 SYNPR (ENSCHAG00000026426) nampt2 (ENSCHAG00000026435) ENSCHAG00000026464 fezf2 (ENSCHAG00000026734) C3orf14 (ENSCHAG00000000696) ptprga (ENSCHAG00000001641) FHIT (ENSCHAG00000009456) ENSCHAG00000009477 FAM107A (ENSCHAG00000009493) ccdc3b (ENSCHAG00000009526) CAMK1 (ENSCHAG00000009558) prelid3b (ENSCHAG00000009883) aurka (ENSCHAG00000009943) #22 slc32a1 (ENSCHAG00000010318) ARHGAP40 (ENSCHAG00000010341) PPP1R16B (ENSCHAG00000010420) fam210b (ENSCHAG00000010506) #23 ENSCHAG00000010521 shmt2 (ENSCHAG00000010569) STAC3 (ENSCHAG00000012579) R3HDM2 (ENSCHAG00000012793) INHBC (ENSCHAG00000014032) gli1 (ENSCHAG00000014040) ENSCHAG00000014050 ARHGAP9 (ENSCHAG00000014062) mars1 (ENSCHAG00000014303) ddit3 (ENSCHAG00000017490) ENSCHAG00000017499 Otophysi ANCESTRAL SPECIES 15 ENSGT00940000156300.k ENSGT00390000001799 ENSGT00940000155569.a.a ENSGT00530000063255.A ENSGT01000000214440.B ENSGT00640000091492.b ENSGT00940000155769.`b.b ENSGT01080000257445 ENSGT00940000157009 ENSGT00950000183066.a.b.a.b ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f #8 ENSGT00390000000724.c.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00940000168625 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Cyprinoidei ANCESTRAL SPECIES 192 ENSGT01050000244866.D.a ENSGT00390000018016 ENSGT00390000001912.f #8 ENSGT00390000000724.c.a.h ENSGT00950000182810.A.a.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1695 ENSGT00940000154900.jb #22 ENSGT00940000162174.a Goldfish DUPLICATION Goldfish MODERN SPECIES 24 ddx3xb (ENSCARG00000040890) ENSCARG00000037499 GPR34 (ENSCARG00000037388) caskb (ENSCARG00000032909) ENSCARG00000032758 slain1b (ENSCARG00000032717) ENSCARG00000032709 ENSCARG00000032677 ENSCARG00000032673 ENSCARG00000032664 nufip1 (ENSCARG00000032657) ccndbp1 (ENSCARG00000032630) pck1 (ENSCARG00000032616) #8 PMEPA1 (ENSCARG00000032608) prelid3b (ENSCARG00000032514) aurka (ENSCARG00000032499) #22 slc32a1 (ENSCARG00000032482) ARHGAP40 (ENSCARG00000032453) Goldfish MODERN SPECIES 1493 prelid3b (ENSCARG00000042215) aurka (ENSCARG00000042189) #22 slc32a1 (ENSCARG00000042142) ENSCARG00000042124 Cyprininae_a ANCESTRAL SPECIES 976 ENSGT00940000154900.jb #22 ENSGT00940000162174.a Common carp reference MODERN SPECIES 16 caskb (ENSCCRG00000080734) ENSCCRG00000048427 ENSCCRG00000057653 ENSCCRG00000068300 ENSCCRG00000063164 ENSCCRG00000075840 ENSCCRG00000054179 ENSCCRG00000080940 ENSCCRG00000073942 nufip1 (ENSCCRG00000076500) ccndbp1 (ENSCCRG00000036168) ENSCCRG00000037775 #8 ENSCCRG00000078354 prelid3b (ENSCCRG00000037757) slc32a1 (ENSCCRG00000057158) ENSCCRG00000037771 #22 ENSCCRG00000077024 ENSCCRG00000077630 NXPH4 (ENSCCRG00000065690) shmt2 (ENSCCRG00000082392) NDUFA4L2 (ENSCCRG00000064863) fam210b (ENSCCRG00000077474) #23 ENSCCRG00000053109 R3HDM2 (ENSCCRG00000071539) INHBC (ENSCCRG00000026052) gli1 (ENSCCRG00000069930) ENSCCRG00000081050 ARHGAP9 (ENSCCRG00000001377) mars1 (ENSCCRG00000041762) ddit3 (ENSCCRG00000056475) dctn2 (ENSCCRG00000041698) Golden-line barbel MODERN SPECIES 576 ENSSGRG00000032216 ENSSGRG00000032214 kdm6al (ENSSGRG00000031942) ddx3xb (ENSSGRG00000031713) GPR34 (ENSSGRG00000031165) caskb (ENSSGRG00000028399) FBXL3 (ENSSGRG00000028340) ENSSGRG00000028335 slain1b (ENSSGRG00000028334) MTRF1 (ENSSGRG00000028333) ENSSGRG00000028332 nufip1 (ENSSGRG00000028331) PMEPA1 (ENSSGRG00000028330) prelid3b (ENSSGRG00000028329) aurka (ENSSGRG00000028328) #22 ARHGAP40 (ENSSGRG00000028327) ENSSGRG00000028326 fam210b (ENSSGRG00000028324) #23 shmt2 (ENSSGRG00000028323) NXPH4 (ENSSGRG00000028322) R3HDM2 (ENSSGRG00000028319) Cyprininae ANCESTRAL SPECIES 497 ENSGT00940000155375.p ENSGT00390000017860.a.b.f.i ENSGT00940000156877 ENSGT01070000253816.a.a.b.d ENSGT00940000175375 ENSGT00940000159144.A.g ENSGT00390000003758 ENSGT00390000018016.m ENSGT00390000001912.f #8 ENSGT00390000000724.c.a.g ENSGT00390000000724.c.a.h ENSGT00950000182810.A.a.a.a ENSGT00940000154900.kb #22 ENSGT00490000043380.a ENSGT00940000162174.b ENSGT00940000154090.b.c ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.f ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k.d ENSGT00390000002762.a.a.b.a.e Goldfish MODERN SPECIES 46 kdm6al (ENSCARG00000013650) FUNDC1 (ENSCARG00000013359) ddx3xb (ENSCARG00000012380) GPR34 (ENSCARG00000012346) caskb (ENSCARG00000006361) ENSCARG00000005985 ENSCARG00000005937 ENSCARG00000005900 ENSCARG00000005890 TGDS (ENSCARG00000005880) ENSCARG00000005875 GPR180 (ENSCARG00000005851) ENSCARG00000005504 pmepa1 (ENSCARG00000005475) prelid3b (ENSCARG00000005442) aurka (ENSCARG00000005426) #22 slc32a1 (ENSCARG00000005422) ARHGAP40 (ENSCARG00000005406) ENSCARG00000005377 fam210b (ENSCARG00000005368) #23 shmt2 (ENSCARG00000005038) ENSCARG00000005002 SLC2A1 (ENSCARG00000004570) ddit3 (ENSCARG00000004512) ENSCARG00000004499 dctn2 (ENSCARG00000004281) ENSCARG00000004168 igsf8 (ENSCARG00000004141) sp7 (ENSCARG00000004131) ENSCARG00000004113 ENSCARG00000003906 Cyprininae_a ANCESTRAL SPECIES 466 ENSGT00980000201779 ENSGT00940000159144.A.h ENSGT00940000159196 ENSGT00940000153981.A ENSGT01050000244866.D.a ENSGT00390000018016.n ENSGT00390000018016.m ENSGT00390000001912.f #8 ENSGT00390000000724.c.a.h ENSGT00950000182810.A.a.a.a ENSGT00940000154900.kb #22 ENSGT00490000043380.a ENSGT00940000162174.b ENSGT00940000154090.b.c.a ENSGT00940000156134 #23 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.e Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 963 ENSSGRG00000030516 caskb (ENSSGRG00000031138) GPR34 (ENSSGRG00000033742) ENSSGRG00000033745 slain1b (ENSSGRG00000033746) ENSSGRG00000033748 zgc:65895 (ENSSGRG00000033750) zgc:65895 (ENSSGRG00000033751) ENSSGRG00000033757 GPR180 (ENSSGRG00000033762) ENSSGRG00000033859 ccndbp1 (ENSSGRG00000033860) pck1 (ENSSGRG00000033861) #8 pmepa1 (ENSSGRG00000033868) prelid3b (ENSSGRG00000033870) aurka (ENSSGRG00000033879) #22 slc32a1 (ENSSGRG00000033880) Golden-line barbel MODERN SPECIES 631 aurka (ENSSGRG00000010773) #22 slc32a1 (ENSSGRG00000010775) ENSSGRG00000010776 PPP1R16B (ENSSGRG00000010778) ENSSGRG00000010832 shmt2 (ENSSGRG00000010836) R3HDM2 (ENSSGRG00000010841) INHBC (ENSSGRG00000010845) gli1 (ENSSGRG00000010847) ENSSGRG00000010849 ARHGAP9 (ENSSGRG00000010853) mars1 (ENSSGRG00000010865) ENSSGRG00000011069 dctn2 (ENSSGRG00000011098) ENSSGRG00000012222 ENSSGRG00000012308 Common carp reference MODERN SPECIES 10 kdm6al (ENSCCRG00000047102) ENSCCRG00000082686 ddx3xb (ENSCCRG00000060626) caskb (ENSCCRG00000080829) ENSCCRG00000075242 ENSCCRG00000047264 ENSCCRG00000063712 ENSCCRG00000070263 ENSCCRG00000042744 ENSCCRG00000076435 ENSCCRG00000036491 ENSCCRG00000036183 ccndbp1 (ENSCCRG00000081482) pmepa1 (ENSCCRG00000060226) prelid3b (ENSCCRG00000074761) aurka (ENSCCRG00000056698) #22 slc32a1 (ENSCCRG00000065530) ENSCCRG00000037790 ENSCCRG00000067141 ENSCCRG00000068291 ENSCCRG00000055406 R3HDM2 (ENSCCRG00000067940) INHBC (ENSCCRG00000071251) gli1 (ENSCCRG00000075525) ENSCCRG00000072309 ARHGAP9 (ENSCCRG00000056214) mars1 (ENSCCRG00000057358) ENSCCRG00000016542 ddit3 (ENSCCRG00000041750) ENSCCRG00000041216 dctn2 (ENSCCRG00000075980) Zebrafish MODERN SPECIES 21 kdm6al (ENSDARG00000059794) aamp (ENSDARG00000045019) ENSDARG00000021882 nufip1 (ENSDARG00000101024) zgc:65895 (ENSDARG00000034086) ENSDARG00000033579 GPR180 (ENSDARG00000099851) ENSDARG00000110019 ENSDARG00000068082 slain1b (ENSDARG00000104974) ENSDARG00000097651 ccndbp1 (ENSDARG00000039328) pck1 (ENSDARG00000013522) #8 pmepa1 (ENSDARG00000039325) prelid3b (ENSDARG00000009505) aurka (ENSDARG00000012485) #22 slc32a1 (ENSDARG00000059775) Characiphysae ANCESTRAL SPECIES 79 ENSGT00940000158396.g ENSGT00940000156818 ENSGT00940000158185 ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000177481 ENSGT00940000153181 ENSGT00390000000375 ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000159243 ENSGT00390000006867 ENSGT00390000012762.u ENSGT00940000158491.b ENSGT00940000163584.a ENSGT00940000154900 #22 ENSGT01090000261095 ENSGT00510000047097 ENSGT00940000156125 ENSGT00940000154851.B.b ENSGT00940000156873 ENSGT00940000160524 ENSGT00530000063340 ENSGT00940000154437.f ENSGT00940000174898 ENSGT00940000166467 ENSGT00950000182938.b.b.b.b.b.b.i.b.b ENSGT00940000159146 ENSGT00390000014907.B ENSGT00940000158207 ENSGT00940000179017 Channel catfish MODERN SPECIES 9 GABRA6 (ENSIPUG00000016689) GABRB2 (ENSIPUG00000016801) sh3pxd2b (ENSIPUG00000016846) stk10 (ENSIPUG00000016982) ENSIPUG00000017052 ZER1 (ENSIPUG00000017121) TBC1D13 (ENSIPUG00000017179) ralgds (ENSIPUG00000017222) plgrkt (ENSIPUG00000017297) rln1 (ENSIPUG00000017354) jak2 (ENSIPUG00000017375) stard4 (ENSIPUG00000017479) DTWD2 (ENSIPUG00000017499) ENSIPUG00000017534 ENSIPUG00000017597 aurka (ENSIPUG00000017618) #22 dnajc21 (ENSIPUG00000017629) NEDD4L (ENSIPUG00000017643) wdr55 (ENSIPUG00000017695) chm (ENSIPUG00000017705) ENSIPUG00000017766 dacha (ENSIPUG00000017771) ENSIPUG00000017795 alg13 (ENSIPUG00000017821) p4ha2 (ENSIPUG00000017927) ENSIPUG00000018113 ENSIPUG00000018126 GABRG2 (ENSIPUG00000018132) kdelc2 (ENSIPUG00000018146) ENSIPUG00000018173 ENSIPUG00000018209 Characiphysae_b ANCESTRAL SPECIES 86 ENSGT00940000164716.C.d ENSGT00390000016221 ENSGT00940000158185 ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000177481 ENSGT00940000153181 ENSGT00390000000375 ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000159243 ENSGT00390000006867 ENSGT00390000012762.u ENSGT00940000158491.b ENSGT00940000163584.a ENSGT00940000154900 #22 ENSGT01090000261095 ENSGT00510000047097 ENSGT00940000156125 ENSGT00940000154851.B.b ENSGT00940000156873 ENSGT00940000160524 ENSGT00530000063340 ENSGT00940000154437.f ENSGT00940000174898 ENSGT00940000166467 ENSGT00950000182938.b.b.b.b.b.b.i.b.b ENSGT00940000159146 ENSGT00390000014907.B ENSGT00940000158207 ENSGT00940000179017 Characoidei ANCESTRAL SPECIES 31 ENSGT00940000154900 #22 ENSGT01090000261095 ENSGT00510000047097 ENSGT00940000156125 ENSGT00940000154851.B.b ENSGT00940000156873 ENSGT00940000160524 ENSGT00530000063340 ENSGT00940000154437.f ENSGT00940000174898 ENSGT00940000166467 ENSGT00950000182938.b.b.b.b.b.b.i.b.b ENSGT00940000159146 ENSGT00390000014907.B ENSGT00940000158207 ENSGT00940000166813.u Red-bellied piranha MODERN SPECIES 7 aurka (ENSPNAG00000023312) #22 ENSPNAG00000023336 dnajc21 (ENSPNAG00000023349) agxt2 (ENSPNAG00000023395) prlra (ENSPNAG00000023403) NEDD4L (ENSPNAG00000023466) ENSPNAG00000023480 ENSPNAG00000023499 ZNF532 (ENSPNAG00000023512) ENSPNAG00000023532 rx3 (ENSPNAG00000023546) cplx4a (ENSPNAG00000023570) lman1 (ENSPNAG00000023629) ccbe1 (ENSPNAG00000023647) HCN1 (ENSPNAG00000023705) ENSPNAG00000023716 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000008642 ENSAMXG00000042905 ENSAMXG00000033726 fam219aa (ENSAMXG00000008635) zgc:109965 (ENSAMXG00000008621) MYORG (ENSAMXG00000029080) celf4 (ENSAMXG00000007935) ENSAMXG00000033839 zgc:162344 (ENSAMXG00000036431) tpgs2 (ENSAMXG00000041755) aqp7 (ENSAMXG00000043965) zgc:64106 (ENSAMXG00000034295) nop56 (ENSAMXG00000008041) ubap2a (ENSAMXG00000008051) dcaf12 (ENSAMXG00000008061) aurka (ENSAMXG00000008069) #22 ENSAMXG00000008089 dnajc21 (ENSAMXG00000008099) agxt2 (ENSAMXG00000008119) prlra (ENSAMXG00000008139) NEDD4L (ENSAMXG00000029934) ENSAMXG00000008251 ENSAMXG00000043205 ZNF532 (ENSAMXG00000008280) ENSAMXG00000035398 rx3 (ENSAMXG00000037380) cplx4a (ENSAMXG00000008342) lman1 (ENSAMXG00000040567) ccbe1 (ENSAMXG00000008395) HCN1 (ENSAMXG00000008425) ENSAMXG00000041031 Electric eel DUPLICATION Electric eel MODERN SPECIES 53 zdhhc17 (ENSEEEG00000008140) OSBPL8 (ENSEEEG00000008131) nek2 (ENSEEEG00000008096) SLC30A1 (ENSEEEG00000008092) slc30a1a (ENSEEEG00000008089) rd3 (ENSEEEG00000008088) si:ch211-22i13.2 (ENSEEEG00000008085) rhag (ENSEEEG00000008059) ENSEEEG00000008056 DLGAP2 (ENSEEEG00000008017) ENSEEEG00000008016 #22 grcc10 (ENSEEEG00000008015) saysd1 (ENSEEEG00000008014) ENSEEEG00000008012 bpnt1 (ENSEEEG00000008011) ENSEEEG00000007555 ENSEEEG00000007526 ypel5 (ENSEEEG00000007523) ZFAND3 (ENSEEEG00000007521) btbd9 (ENSEEEG00000007507) zgc:112001 (ENSEEEG00000007501) LRFN2 (ENSEEEG00000007497) tdrd15 (ENSEEEG00000007494) rfx6 (ENSEEEG00000007485) vgll2a (ENSEEEG00000007483) dcbld1 (ENSEEEG00000007482) Electric eel MODERN SPECIES 394 zer1 (ENSEEEG00000013579) TBC1D13 (ENSEEEG00000013625) ENSEEEG00000013626 ralgds (ENSEEEG00000013627) plgrkt (ENSEEEG00000013630) ENSEEEG00000013632 jak2a (ENSEEEG00000013635) stard4 (ENSEEEG00000013637) DTWD2 (ENSEEEG00000013640) ENSEEEG00000013642 rtknb (ENSEEEG00000013643) arid6 (ENSEEEG00000013645) aurka (ENSEEEG00000013646) #22 ENSEEEG00000013647 dnajc21 (ENSEEEG00000013649) agxt2 (ENSEEEG00000013651) prlra (ENSEEEG00000013664) NEDD4L (ENSEEEG00000013711) ENSEEEG00000013857 ENSEEEG00000013859 ENSEEEG00000013861 Osteoglossiformes ANCESTRAL SPECIES 34 ENSGT01050000244866.D.a ENSGT00390000015137 ENSGT00950000183066.a.b.a.b ENSGT00940000157009 ENSGT00940000155769.`b.b ENSGT00640000091492.b ENSGT01000000214440.B ENSGT00530000063255.A ENSGT00940000155569.a.a ENSGT00390000001799 ENSGT01100000264672 ENSGT00940000156300.g ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 #22 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 #23 ENSGT00940000171242 ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00940000168625 ENSGT00950000182860.a.b.a ENSGT00550000075017 ENSGT00390000006305 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES gripap1 (ENSSFOG00015003095) kcnd1 (ENSSFOG00015017051) ENSSFOG00015017062 pim1 (ENSSFOG00015017076) TBC1D22B (ENSSFOG00015017113) ENSSFOG00015017195 ENSSFOG00015017228 ENSSFOG00015017280 pabpc1l (ENSSFOG00015017304) ywhaba (ENSSFOG00015017410) eif2s2 (ENSSFOG00015017437) chmp4bb (ENSSFOG00015017482) VAPB (ENSSFOG00015017501) ENSSFOG00015017564 ENSSFOG00015032545 AURKA (ENSSFOG00015017657) #22 ENSSFOG00015017669 actr5 (ENSSFOG00015017683) ENSSFOG00015017721 ENSSFOG00015017752 kif5aa (ENSSFOG00015017759) pcbp2 (ENSSFOG00015017796) map3k12 (ENSSFOG00015017844) aaas (ENSSFOG00015033042) col2a1a (ENSSFOG00015017970) spryd4 (ENSSFOG00015026803) asic1a (ENSSFOG00015018213) SMARCD1 (ENSSFOG00015018240) gpd1a (ENSSFOG00015031260) ENSSFOG00015018330 ENSSFOG00015030782 Asian bonytongue MODERN SPECIES 14 pck1 (ENSSFOG00015012219) #8 ccndbp1 (ENSSFOG00015012202) ENSSFOG00015012186 ENSSFOG00015012113 rab22a (ENSSFOG00015031982) vapb (ENSSFOG00015012064) APCDD1L (ENSSFOG00015028370) STX16 (ENSSFOG00015012001) npepl1 (ENSSFOG00015011952) ctsz (ENSSFOG00015011920) nelfcd (ENSSFOG00015011858) GNAS (ENSSFOG00015017527) tubb1 (ENSSFOG00015011762) atp5f1e (ENSSFOG00015011747) prelid3b (ENSSFOG00015032113) aurka (ENSSFOG00015011498) #22 slc32a1 (ENSSFOG00015011446) ARHGAP40 (ENSSFOG00015011407) PPP1R16B (ENSSFOG00015011383) fam210b (ENSSFOG00015025330) #23 ENSSFOG00015011355 shmt2 (ENSSFOG00015028462) NXPH4 (ENSSFOG00015028192) ENSSFOG00015028766 stac3 (ENSSFOG00015011275) R3HDM2 (ENSSFOG00015011219) INHBC (ENSSFOG00015027806) gli1 (ENSSFOG00015030820) ENSSFOG00015027704 ARHGAP9 (ENSSFOG00015011122) mars1 (ENSSFOG00015011038) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 137 ENSPKIG00000007564 ENSPKIG00000007461 pabpc1l (ENSPKIG00000007322) YWHAB (ENSPKIG00000007244) eif2s2 (ENSPKIG00000007195) chmp4bb (ENSPKIG00000007162) VAPB (ENSPKIG00000007144) ENSPKIG00000007119 GNAS (ENSPKIG00000007077) ENSPKIG00000007057 ENSPKIG00000007045 ENSPKIG00000007016 ENSPKIG00000006991 #22 ENSPKIG00000006904 actr5 (ENSPKIG00000006836) ENSPKIG00000006805 NXPH4 (ENSPKIG00000006789) ENSPKIG00000006773 kif5aa (ENSPKIG00000006660) pcbp2 (ENSPKIG00000006570) map3k12 (ENSPKIG00000006502) aaas (ENSPKIG00000006426) col2a1a (ENSPKIG00000006337) spryd4 (ENSPKIG00000006304) asic1a (ENSPKIG00000006274) SMARCD1 (ENSPKIG00000006252) gpd1a (ENSPKIG00000006222) mdh2 (ENSPKIG00000006206) P. kingsleyae MODERN SPECIES 51 ANKRD60 (ENSPKIG00000004240) ENSPKIG00000004172 rab22a (ENSPKIG00000004103) vapb (ENSPKIG00000004051) APCDD1L (ENSPKIG00000004030) STX16 (ENSPKIG00000004007) npepl1 (ENSPKIG00000003963) ctsz (ENSPKIG00000003935) nelfcd (ENSPKIG00000003887) ENSPKIG00000003849 GNAS (ENSPKIG00000003758) ENSPKIG00000003689 tubb1 (ENSPKIG00000003668) atp5f1e (ENSPKIG00000003652) prelid3b (ENSPKIG00000003635) aurka (ENSPKIG00000003609) #22 slc32a1 (ENSPKIG00000003580) ARHGAP40 (ENSPKIG00000003490) ENSPKIG00000003460 PPP1R16B (ENSPKIG00000003423) fam210b (ENSPKIG00000003397) #23 shmt2 (ENSPKIG00000003334) NXPH4 (ENSPKIG00000003288) stac3 (ENSPKIG00000003255) R3HDM2 (ENSPKIG00000003171) INHBC (ENSPKIG00000003119) gli1 (ENSPKIG00000003048) ENSPKIG00000003002 ARHGAP9 (ENSPKIG00000002965) mars1 (ENSPKIG00000002833) ddit3 (ENSPKIG00000002766) Reedfish MODERN SPECIES 1 rab22a (ENSECRG00000008423) vapb (ENSECRG00000008408) APCDD1L (ENSECRG00000008400) STX16 (ENSECRG00000008387) npepl1 (ENSECRG00000008355) ctsz (ENSECRG00000008334) nelfcd (ENSECRG00000008310) ENSECRG00000008285 GNAS (ENSECRG00000008176) ENSECRG00000008122 ENSECRG00000008108 ENSECRG00000008029 ENSECRG00000008000 atp5f1e (ENSECRG00000007995) prelid3b (ENSECRG00000007984) aurka (ENSECRG00000007974) #22 fam210b (ENSECRG00000007962) #23 PPP1R16B (ENSECRG00000011629) actr5 (ENSECRG00000011607) ARHGAP40 (ENSECRG00000011579) slc32a1 (ENSECRG00000011564) ENSECRG00000011529 ENSECRG00000011521 ENSECRG00000011510 ENSECRG00000011500 slc13a3 (ENSECRG00000011484) tp53rk (ENSECRG00000011470) slc2a10 (ENSECRG00000011462) mc3r (ENSECRG00000011450) #24 ENSECRG00000011432 cbln4 (ENSECRG00000011420) #25