Amniota	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Mammalia	ANCESTRAL SPECIES	38	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Theria	ANCESTRAL SPECIES	35	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Glires	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #26	ENSGT00390000016845 #27	ENSGT00940000155982 #28	ENSGT00940000157612 #29	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00940000155443 #33	ENSGT00390000008069 #34	ENSGT00940000155699 #35	ENSGT00390000003990 #36	ENSGT00940000155623 #37	ENSGT01060000248676	ENSGT00940000154645.A
Rat	MODERN SPECIES	16	Eipr1 (ENSRNOG00000009285) #7	Trappc12 (ENSRNOG00000009039) #8	Adi1 (ENSRNOG00000008950) #9	Rnaseh1 (ENSRNOG00000008584) #10	Rps7 (ENSRNOG00000008373) #11	Allc (ENSRNOG00000008299) #12	Akr1b1-ps1 (ENSRNOG00000042697) #13	ENSRNOG00000070424 #14	Dcdc2c (ENSRNOG00000067604) #15	ENSRNOG00000069562 #16	ENSRNOG00000068283 #17	Sox11 (ENSRNOG00000030034) #18	Cmpk2 (ENSRNOG00000007690) #19	Rsad2 (ENSRNOG00000007539) #20	Rnf144a (ENSRNOG00000007370) #21	Id2 (ENSRNOG00000007237) #22	LOC120093241 (ENSRNOG00000062523) #23	Kidins220 (ENSRNOG00000023176) #24	Mboat2 (ENSRNOG00000061050) #25	Rrm2 (ENSRNOG00000054286) #26	Cys1 (ENSRNOG00000058891) #27	Klf11 (ENSRNOG00000054259) #28	Grhl1 (ENSRNOG00000054989) #29	Rbm34-ps1 (ENSRNOG00000065550) #30	Taf1b (ENSRNOG00000061415) #31	Ywhaq (ENSRNOG00000051650) #32	Adam17 (ENSRNOG00000060694) #33	Iah1 (ENSRNOG00000060853) #34	Cpsf3 (ENSRNOG00000052418) #35	Itgb1bp1 (ENSRNOG00000059402) #36	Asap2 (ENSRNOG00000061519) #37
Mus	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #26	ENSGT00390000016845 #27	ENSGT00940000155982 #28	ENSGT00940000157612 #29	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00940000155443 #33	ENSGT00390000008069 #34	ENSGT00940000155699 #35	ENSGT00390000003990 #36	ENSGT00940000155623 #37	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a
Shrew mouse	MODERN SPECIES	20	Tpo (MGP_PahariEiJ_G0029424)	Pxdn (MGP_PahariEiJ_G0029423)	Myt1l (MGP_PahariEiJ_G0029422)	Eipr1 (MGP_PahariEiJ_G0029421) #7	Trappc12 (MGP_PahariEiJ_G0029420) #8	Adi1 (MGP_PahariEiJ_G0029419) #9	Rnaseh1 (MGP_PahariEiJ_G0029418) #10	MGP_PahariEiJ_G0029417	Colec11 (MGP_PahariEiJ_G0029416) #11	Allc (MGP_PahariEiJ_G0029415) #12	MGP_PahariEiJ_G0029414 #15	Sox11 (MGP_PahariEiJ_G0029413) #18	Cmpk2 (MGP_PahariEiJ_G0029412) #19	Rsad2 (MGP_PahariEiJ_G0029411) #20	Rnf144a (MGP_PahariEiJ_G0029410) #21	MGP_PahariEiJ_G0029409 #22	Kidins220 (MGP_PahariEiJ_G0029408) #24	Mboat2 (MGP_PahariEiJ_G0029407) #25	MGP_PahariEiJ_G0029405 #26	Cys1 (MGP_PahariEiJ_G0029404) #27	Klf11 (MGP_PahariEiJ_G0029403) #28	MGP_PahariEiJ_G0029402 #29	MGP_PahariEiJ_G0029401 #31	MGP_PahariEiJ_G0029400 #32	Adam17 (MGP_PahariEiJ_G0029399) #33	Iah1 (MGP_PahariEiJ_G0029398) #34	Cpsf3 (MGP_PahariEiJ_G0029397) #35	Itgb1bp1 (MGP_PahariEiJ_G0029396) #36	Asap2 (MGP_PahariEiJ_G0029395) #37	Odc1 (MGP_PahariEiJ_G0029394)	Nol10 (MGP_PahariEiJ_G0029393)
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #26	ENSGT00390000016845 #27	ENSGT00940000155982 #28	ENSGT00940000157612 #29	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00940000155443 #33	ENSGT00390000008069 #34	ENSGT00940000155699 #35	ENSGT00390000003990 #36	ENSGT00940000155623 #37	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a.e
Ryukyu mouse	MODERN SPECIES	3	Tpo (MGP_CAROLIEiJ_G0017666)	Pxdn (MGP_CAROLIEiJ_G0017665)	Myt1l (MGP_CAROLIEiJ_G0017664)	Eipr1 (MGP_CAROLIEiJ_G0017663) #7	Trappc12 (MGP_CAROLIEiJ_G0017662) #8	Adi1 (MGP_CAROLIEiJ_G0017661) #9	Rnaseh1 (MGP_CAROLIEiJ_G0017660) #10	Rps7 (MGP_CAROLIEiJ_G0017659)	Colec11 (MGP_CAROLIEiJ_G0017658) #11	Allc (MGP_CAROLIEiJ_G0017657) #12	MGP_CAROLIEiJ_G0017656 #15	Sox11 (MGP_CAROLIEiJ_G0017655) #18	Cmpk2 (MGP_CAROLIEiJ_G0017654) #19	Rsad2 (MGP_CAROLIEiJ_G0017653) #20	Rnf144a (MGP_CAROLIEiJ_G0017652) #21	MGP_CAROLIEiJ_G0017651 #22	Kidins220 (MGP_CAROLIEiJ_G0017650) #24	Mboat2 (MGP_CAROLIEiJ_G0017649) #25	Rrm2 (MGP_CAROLIEiJ_G0017648) #26	Cys1 (MGP_CAROLIEiJ_G0017647) #27	Klf11 (MGP_CAROLIEiJ_G0017646) #28	Grhl1 (MGP_CAROLIEiJ_G0017645) #29	Taf1b (MGP_CAROLIEiJ_G0017644) #31	Ywhaq (MGP_CAROLIEiJ_G0017643) #32	Adam17 (MGP_CAROLIEiJ_G0017642) #33	Iah1 (MGP_CAROLIEiJ_G0017641) #34	Cpsf3 (MGP_CAROLIEiJ_G0017640) #35	Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #36	Asap2 (MGP_CAROLIEiJ_G0017638) #37	Odc1 (MGP_CAROLIEiJ_G0017637)	Nol10 (MGP_CAROLIEiJ_G0017636)
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #26	ENSGT00390000016845 #27	ENSGT00940000155982 #28	ENSGT00940000157612 #29	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00940000155443 #33	ENSGT00390000008069 #34	ENSGT00940000155699 #35	ENSGT00390000003990 #36	ENSGT00940000155623 #37	ENSGT01060000248676	ENSGT00940000154645.A
Mouse	MODERN SPECIES	3	Tpo (ENSMUSG00000020673)	Pxdn (ENSMUSG00000020674)	Myt1l (ENSMUSG00000061911)	Eipr1 (ENSMUSG00000036613) #7	Trappc12 (ENSMUSG00000020628) #8	Adi1 (ENSMUSG00000020629) #9	Rnaseh1 (ENSMUSG00000020630) #10	Rps7 (ENSMUSG00000061477)	Colec11 (ENSMUSG00000036655) #11	Allc (ENSMUSG00000020636) #12	Dcdc2c (ENSMUSG00000020633) #15	Sox11 (ENSMUSG00000063632) #18	Cmpk2 (ENSMUSG00000020638) #19	Rsad2 (ENSMUSG00000020641) #20	Rnf144a (ENSMUSG00000020642) #21	Id2 (ENSMUSG00000020644) #22	Kidins220 (ENSMUSG00000036333) #24	Mboat2 (ENSMUSG00000020646) #25	Rrm2 (ENSMUSG00000020649) #26	Cys1 (ENSMUSG00000062563) #27	Klf11 (ENSMUSG00000020653) #28	Grhl1 (ENSMUSG00000020656) #29	Taf1b (ENSMUSG00000059669) #31	9030624G23Rik (ENSMUSG00000073158)	Ywhaq (ENSMUSG00000076432) #32	Adam17 (ENSMUSG00000052593) #33	Iah1 (ENSMUSG00000062054) #34	Cpsf3 (ENSMUSG00000054309) #35	Itgb1bp1 (ENSMUSG00000062352) #36	Asap2 (ENSMUSG00000052632) #37	Gm21863 (ENSMUSG00000095470)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #26	ENSGT00390000016845 #27	ENSGT00940000155982 #28	ENSGT00940000157612 #29	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00940000155443 #33	ENSGT00390000008069 #34	ENSGT00940000155699 #35	ENSGT00390000003990 #36	ENSGT00940000155623 #37	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.e
Steppe mouse	MODERN SPECIES	56										ENSMSIG00000025619	ENSMSIG00000025668	Rsad2 (ENSMSIG00000025674) #20	Rnf144a (ENSMSIG00000025691) #21	ENSMSIG00000025745	ENSMSIG00000025755	ENSMSIG00000025759 #22	Kidins220 (ENSMSIG00000025770) #24	Mboat2 (ENSMSIG00000025871) #25	Rrm2 (ENSMSIG00000025915) #26	ENSMSIG00000025932	Klf11 (ENSMSIG00000025936) #28	Grhl1 (ENSMSIG00000025943) #29	Taf1b (ENSMSIG00000026008) #31
spretus	MODERN SPECIES	3	Tpo (MGP_SPRETEiJ_G0018508)	Pxdn (MGP_SPRETEiJ_G0018507)	Myt1l (MGP_SPRETEiJ_G0018506)	Eipr1 (MGP_SPRETEiJ_G0018505) #7	Trappc12 (MGP_SPRETEiJ_G0018504) #8	Adi1 (MGP_SPRETEiJ_G0018503) #9	Rnaseh1 (MGP_SPRETEiJ_G0018502) #10	MGP_SPRETEiJ_G0018501	Colec11 (MGP_SPRETEiJ_G0018500) #11	Allc (MGP_SPRETEiJ_G0018499) #12	MGP_SPRETEiJ_G0018498 #15	Sox11 (MGP_SPRETEiJ_G0018497) #18	Cmpk2 (MGP_SPRETEiJ_G0018496) #19	Rsad2 (MGP_SPRETEiJ_G0018495) #20	Rnf144a (MGP_SPRETEiJ_G0018494) #21	MGP_SPRETEiJ_G0018493 #22	Kidins220 (MGP_SPRETEiJ_G0018492) #24	Mboat2 (MGP_SPRETEiJ_G0018491) #25	Rrm2 (MGP_SPRETEiJ_G0018490) #26	Cys1 (MGP_SPRETEiJ_G0018489) #27	Klf11 (MGP_SPRETEiJ_G0018488) #28	Grhl1 (MGP_SPRETEiJ_G0018487) #29	MGP_SPRETEiJ_G0018486	Taf1b (MGP_SPRETEiJ_G0018485) #31	Ywhaq (MGP_SPRETEiJ_G0018484) #32	Adam17 (MGP_SPRETEiJ_G0018483) #33	Iah1 (MGP_SPRETEiJ_G0018482) #34	Cpsf3 (MGP_SPRETEiJ_G0018481) #35	Itgb1bp1 (MGP_SPRETEiJ_G0018480) #36	Asap2 (MGP_SPRETEiJ_G0018479) #37	Nol10 (MGP_SPRETEiJ_G0018478)
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.g
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	737	Tpo (ENSMAUG00000001044)	Pxdn (ENSMAUG00000010293)	Myt1l (ENSMAUG00000011990)	Eipr1 (ENSMAUG00000014834) #7	Trappc12 (ENSMAUG00000012942) #8	Adi1 (ENSMAUG00000017657) #9	Rnaseh1 (ENSMAUG00000014957) #10	Rps7 (ENSMAUG00000012178)	Colec11 (ENSMAUG00000012547) #11	Allc (ENSMAUG00000015102) #12	ENSMAUG00000010849 #15	Sox11 (ENSMAUG00000016656) #18	Cmpk2 (ENSMAUG00000017501) #19	Rsad2 (ENSMAUG00000008669) #20	Rnf144a (ENSMAUG00000014880) #21	Id2 (ENSMAUG00000012468) #22	Kidins220 (ENSMAUG00000011599) #24	Mboat2 (ENSMAUG00000005505) #25	Asap2 (ENSMAUG00000001240) #37	Itgb1bp1 (ENSMAUG00000017998) #36	Cpsf3 (ENSMAUG00000000166) #35	Iah1 (ENSMAUG00000018865) #34	Adam17 (ENSMAUG00000015291) #33	ENSMAUG00000017035 ##32	Taf1b (ENSMAUG00000013477) #31	Grhl1 (ENSMAUG00000013649) #29	ENSMAUG00000016595 #26
Golden Hamster	MODERN SPECIES	704	2210016L21Rik (ENSMAUG00000021072)	ENSMAUG00000018493	ENSMAUG00000000936	ENSMAUG00000012403	ENSMAUG00000008365	ENSMAUG00000014735	Git2 (ENSMAUG00000010532)	ENSMAUG00000012818	Gltp (ENSMAUG00000000222)	Trpv4 (ENSMAUG00000016534)	Fam222a (ENSMAUG00000015503)	Mvk (ENSMAUG00000011969)	Mmab (ENSMAUG00000011390)	Ube3b (ENSMAUG00000020390)	Kctd10 (ENSMAUG00000000200)	ENSMAUG00000002109 #22	Myo1h (ENSMAUG00000014848)	Foxn4 (ENSMAUG00000011231)	ENSMAUG00000019057	ENSMAUG00000000167	Ung (ENSMAUG00000011896)	Alkbh2 (ENSMAUG00000009228)	Usp30 (ENSMAUG00000001182)	Svop (ENSMAUG00000014398)	Dao (ENSMAUG00000000506)	Ssh1 (ENSMAUG00000000524)	ENSMAUG00000017903	Selplg (ENSMAUG00000015330)	Tmem119 (ENSMAUG00000014114)	ENSMAUG00000012004	Sart3 (ENSMAUG00000012434)
Chinese hamster chok1gshd	MODERN SPECIES	229	Pxdn (ENSCGRG00001003434)	Myt1l (ENSCGRG00001004175)	Eipr1 (ENSCGRG00001013353) #7	Trappc12 (ENSCGRG00001022951) #8	Adi1 (ENSCGRG00001008870) #9	Rnaseh1 (ENSCGRG00001008950) #10	Rps7 (ENSCGRG00001017318)	Colec11 (ENSCGRG00001015605) #11	Allc (ENSCGRG00001009626) #12	ENSCGRG00001022074 #15	Sox11 (ENSCGRG00001007958) #18	Cmpk2 (ENSCGRG00001018716) #19	Rsad2 (ENSCGRG00001014337) #20	Rnf144a (ENSCGRG00001007035) #21	ENSCGRG00001023880	Id2 (ENSCGRG00001023029) #22	Kidins220 (ENSCGRG00001016681) #24	Mboat2 (ENSCGRG00001015841) #25	Asap2 (ENSCGRG00001022680) #37	Itgb1bp1 (ENSCGRG00001000664) #36	Cpsf3 (ENSCGRG00001013134) #35	Iah1 (ENSCGRG00001019624) #34	Adam17 (ENSCGRG00001024922) #33	Ywhaq (ENSCGRG00001024724) #32	ENSCGRG00001018516 #31	Grhl1 (ENSCGRG00001024970) #29	Klf11 (ENSCGRG00001018478) #28	Cys1 (ENSCGRG00001013951) #27	Rrm2 (ENSCGRG00001007841) #26	Hpcal1 (ENSCGRG00001023170)	ENSCGRG00001015979
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Prairie vole	MODERN SPECIES	93												Cmpk2 (ENSMOCG00000000423) #19	ENSMOCG00000020673 #20	Rnf144a (ENSMOCG00000000314) #21	ENSMOCG00000012398	Id2 (ENSMOCG00000002908) #22	Kidins220 (ENSMOCG00000011232) #24	Mboat2 (ENSMOCG00000021674) #25	Asap2 (ENSMOCG00000019749) #37	Itgb1bp1 (ENSMOCG00000017072) #36	Cpsf3 (ENSMOCG00000020067) #35	Iah1 (ENSMOCG00000017872) #34	Adam17 (ENSMOCG00000010700) #33	Ywhaq (ENSMOCG00000020316) #32	Taf1b (ENSMOCG00000005916) #31	Grhl1 (ENSMOCG00000019210) #29	ENSMOCG00000003070	ENSMOCG00000014995 #28	Cys1 (ENSMOCG00000017656) #27	ENSMOCG00000018114 #26	ENSMOCG00000010909 #26
Northern American deer mouse	MODERN SPECIES	14	Tpo (ENSPEMG00000009447)	Pxdn (ENSPEMG00000021818)	Myt1l (ENSPEMG00000023585)	Eipr1 (ENSPEMG00000018456) #7	Trappc12 (ENSPEMG00000021832) #8	Adi1 (ENSPEMG00000022007) #9	Rnaseh1 (ENSPEMG00000022465) #10	Rps7 (ENSPEMG00000011185)	Colec11 (ENSPEMG00000021365) #11	Allc (ENSPEMG00000022050) #12	ENSPEMG00000022353 #15	Sox11 (ENSPEMG00000014211) #18	Cmpk2 (ENSPEMG00000009342) #19	Rsad2 (ENSPEMG00000008928) #20	Rnf144a (ENSPEMG00000008311) #21	Id2 (ENSPEMG00000006926) #22	Kidins220 (ENSPEMG00000002148) #24	Mboat2 (ENSPEMG00000000110) #25	Asap2 (ENSPEMG00000016930) #37	Itgb1bp1 (ENSPEMG00000012447) #36	Cpsf3 (ENSPEMG00000017668) #35	Iah1 (ENSPEMG00000016641) #34	Adam17 (ENSPEMG00000015840) #33	ENSPEMG00000027877 ##32	Taf1b (ENSPEMG00000013642) #31	Grhl1 (ENSPEMG00000012157) #29	Klf11 (ENSPEMG00000011311) #28	Cys1 (ENSPEMG00000025881) #27	Rrm2 (ENSPEMG00000010359) #26	Hpcal1 (ENSPEMG00000025119)	Nol10 (ENSPEMG00000008676)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1517	Pxdn (ENSNGAG00000010528)	Myt1l (ENSNGAG00000007555)	Eipr1 (ENSNGAG00000001305) #7	Trappc12 (ENSNGAG00000000385) #8	Adi1 (ENSNGAG00000019181) #9	Rnaseh1 (ENSNGAG00000015966) #10	Rps7 (ENSNGAG00000015037)	Colec11 (ENSNGAG00000014244) #11	Allc (ENSNGAG00000004596) #12	ENSNGAG00000002422 #15	ENSNGAG00000017946	Sox11 (ENSNGAG00000016772) #18	Cmpk2 (ENSNGAG00000020998) #19	Rsad2 (ENSNGAG00000020530) #20	Rnf144a (ENSNGAG00000018727) #21	Id2 (ENSNGAG00000018053) #22	Kidins220 (ENSNGAG00000012753) #24	Mboat2 (ENSNGAG00000004975) #25	Asap2 (ENSNGAG00000020450) #37	Itgb1bp1 (ENSNGAG00000015478) #36	Cpsf3 (ENSNGAG00000019836) #35	Iah1 (ENSNGAG00000017153) #34	Adam17 (ENSNGAG00000016571) #33	Ywhaq (ENSNGAG00000012388) #32	ENSNGAG00000015636	Taf1b (ENSNGAG00000010048) #31	Grhl1 (ENSNGAG00000004562) #29	Klf11 (ENSNGAG00000018758) #28	Cys1 (ENSNGAG00000015080) #27	Rrm2 (ENSNGAG00000013008) ##26	Hpcal1 (ENSNGAG00000012465)
Lesser Egyptian jerboa	MODERN SPECIES	60	Adi1 (ENSJJAG00000015172) #9	Rnaseh1 (ENSJJAG00000020238) #10	Rps7 (ENSJJAG00000022333)	ENSJJAG00000016342	Colec11 (ENSJJAG00000024203) #11	Allc (ENSJJAG00000022633) #12	ENSJJAG00000019578 #15	ENSJJAG00000008563	ENSJJAG00000001095	Sox11 (ENSJJAG00000020821) #18	ENSJJAG00000014421	Cmpk2 (ENSJJAG00000014410) #19	Rsad2 (ENSJJAG00000014573) #20	Rnf144a (ENSJJAG00000019519) #21	ENSJJAG00000017500	Id2 (ENSJJAG00000001304) #22	ENSJJAG00000015827	ENSJJAG00000020082
Kangaroo rat	MODERN SPECIES	339														Rsad2 (ENSDORG00000008537) #20	Rnf144a (ENSDORG00000010145) #21	Id2 (ENSDORG00000014815) #22	Kidins220 (ENSDORG00000014817) #24	Mboat2 (ENSDORG00000007348) #25	Asap2 (ENSDORG00000014261) #37	Itgb1bp1 (ENSDORG00000014262) #36	Cpsf3 (ENSDORG00000014263) #35	Adam17 (ENSDORG00000014267) #33	ENSDORG00000028741 ##32	Taf1b (ENSDORG00000010154) #31	ENSDORG00000028599 #29	ENSDORG00000024766 #29	ENSDORG00000024620 #28	Rrm2 (ENSDORG00000002514) #26	Hpcal1 (ENSDORG00000007055)	Odc1 (ENSDORG00000002669)	Nol10 (ENSDORG00000001331)
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982.b #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v.b #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069.k.a #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982.b #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.v.b #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Alpin marmot	MODERN SPECIES	6	MYT1L (ENSMMMG00000022919)	EIPR1 (ENSMMMG00000022897) #7	TRAPPC12 (ENSMMMG00000022884) #8	ADI1 (ENSMMMG00000022876) #9	RNASEH1 (ENSMMMG00000022864) #10	ENSMMMG00000022860	RPS7 (ENSMMMG00000022853)	COLEC11 (ENSMMMG00000022843) #11	ALLC (ENSMMMG00000022836) #12	DCDC2C (ENSMMMG00000022831) #15	ENSMMMG00000022822	SOX11 (ENSMMMG00000022819) #18	CMPK2 (ENSMMMG00000022812) #19	RSAD2 (ENSMMMG00000022810) #20	RNF144A (ENSMMMG00000022809) #21	ID2 (ENSMMMG00000022803) #22	KIDINS220 (ENSMMMG00000022748) #24	MBOAT2 (ENSMMMG00000022735) #25	ASAP2 (ENSMMMG00000022671) #37	ITGB1BP1 (ENSMMMG00000022669) #36	CPSF3 (ENSMMMG00000022663) #35	IAH1 (ENSMMMG00000022658) #34	ADAM17 (ENSMMMG00000022654) #33	YWHAQ (ENSMMMG00000022652) #32	TAF1B (ENSMMMG00000022638) #31	GRHL1 (ENSMMMG00000022631) #29	KLF11 (ENSMMMG00000022629) #28	ENSMMMG00000022625 #27	ENSMMMG00000022624 #26	HPCAL1 (ENSMMMG00000022618)	ODC1 (ENSMMMG00000022615)
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069.k.a #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.b ##32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982.b #28	ENSGT00390000013305.a.a.v.b #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Arctic ground squirrel	MODERN SPECIES													SOX11 (ENSUPAG00010012315) #18	CMPK2 (ENSUPAG00010012310) #19	RSAD2 (ENSUPAG00010012305) #20	RNF144A (ENSUPAG00010012263) #21	ID2 (ENSUPAG00010012253) #22	KIDINS220 (ENSUPAG00010012028) #24	MBOAT2 (ENSUPAG00010011957) #25	ASAP2 (ENSUPAG00010011650) #37	ITGB1BP1 (ENSUPAG00010011629) #36	CPSF3 (ENSUPAG00010011610) #35	ENSUPAG00010011577 #34	ADAM17 (ENSUPAG00010011539) #33	YWHAQ (ENSUPAG00010011534) ##32	TAF1B (ENSUPAG00010011508) #31	GRHL1 (ENSUPAG00010011483) #29	KLF11 (ENSUPAG00010011457) #28	CYS1 (ENSUPAG00010011444) #27	HPCAL1 (ENSUPAG00010011428)	ODC1 (ENSUPAG00010011416)	NOL10 (ENSUPAG00010011386)
Squirrel	MODERN SPECIES	132	TMEM18 (ENSSTOG00000027494)	TPO (ENSSTOG00000012111)	PXDN (ENSSTOG00000020472)	MYT1L (ENSSTOG00000001345)	EIPR1 (ENSSTOG00000006844) #7	TRAPPC12 (ENSSTOG00000027157) #8	ADI1 (ENSSTOG00000029152) #9	RNASEH1 (ENSSTOG00000012774) #10	RPS7 (ENSSTOG00000024830)	COLEC11 (ENSSTOG00000020387) #11	ALLC (ENSSTOG00000002136) #12	DCDC2C (ENSSTOG00000020234) #15	CMPK2 (ENSSTOG00000019402) #19	RSAD2 (ENSSTOG00000006147) #20	RNF144A (ENSSTOG00000027570) #21	ID2 (ENSSTOG00000019401) #22	KIDINS220 (ENSSTOG00000013232) #24	MBOAT2 (ENSSTOG00000020147) #25	ASAP2 (ENSSTOG00000004398) #37	ITGB1BP1 (ENSSTOG00000004464) #36	CPSF3 (ENSSTOG00000004476) #35	ENSSTOG00000004500 #34	ADAM17 (ENSSTOG00000004510) #33	ENSSTOG00000024378 ##32	TAF1B (ENSSTOG00000002419) #31	GRHL1 (ENSSTOG00000019842) #29	ENSSTOG00000030936 #28	ENSSTOG00000033669 #26	HPCAL1 (ENSSTOG00000001514)	ENSSTOG00000000386	NOL10 (ENSSTOG00000005485)
Eurasian red squirrel	MODERN SPECIES	5	TPO (ENSSVLG00005023497)	PXDN (ENSSVLG00005023400)	MYT1L (ENSSVLG00005022260)	EIPR1 (ENSSVLG00005022022) #7	TRAPPC12 (ENSSVLG00005021823) #8	ADI1 (ENSSVLG00005021776) #9	RNASEH1 (ENSSVLG00005021750) #10	ENSSVLG00005021713	COLEC11 (ENSSVLG00005021395) #11	ALLC (ENSSVLG00005021266) #12	DCDC2C (ENSSVLG00005021143) #15	SOX11 (ENSSVLG00005021089) #18	CMPK2 (ENSSVLG00005020981) #19	RSAD2 (ENSSVLG00005020911) #20	RNF144A (ENSSVLG00005020868) #21	ID2 (ENSSVLG00005020830) #22	KIDINS220 (ENSSVLG00005020790) #24	MBOAT2 (ENSSVLG00005020748) #25	ASAP2 (ENSSVLG00005020310) #37	ITGB1BP1 (ENSSVLG00005020179) #36	CPSF3 (ENSSVLG00005020098) #35	IAH1 (ENSSVLG00005019997) #34	ADAM17 (ENSSVLG00005019936) #33	YWHAQ (ENSSVLG00005019899) #32	ENSSVLG00005019881	ENSSVLG00005019695 #31	ENSSVLG00005019438 #29	KLF11 (ENSSVLG00005019337) #28	CYS1 (ENSSVLG00005019295) #27	ENSSVLG00005019233 #26	HPCAL1 (ENSSVLG00005019176)
Hystricomorpha	ANCESTRAL SPECIES	70		ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Hystricomorpha_a	ANCESTRAL SPECIES	70	ENSGT00940000155623 #37	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Guinea pig	MODERN SPECIES	75	ASAP2 (ENSCPOG00000010278) #37	PXDN (ENSCPOG00000011199)	MYT1L (ENSCPOG00000013246)	EIPR1 (ENSCPOG00000005737) #7	TRAPPC12 (ENSCPOG00000005749) #8	ADI1 (ENSCPOG00000027219) #9	RNASEH1 (ENSCPOG00000022278) #10	RPS7 (ENSCPOG00000009795)	COLEC11 (ENSCPOG00000032858) #11	ALLC (ENSCPOG00000014255) #12	ENSCPOG00000022309 #15	SOX11 (ENSCPOG00000019507) #18	CMPK2 (ENSCPOG00000001105) #19	RSAD2 (ENSCPOG00000008107) #20	RNF144A (ENSCPOG00000030215) #21	ID2 (ENSCPOG00000020620) #22	KIDINS220 (ENSCPOG00000022029) #24	MBOAT2 (ENSCPOG00000002635) #25	ENSCPOG00000036667	ENSCPOG00000038838	TMEM18 (ENSCPOG00000012522)	ALKAL2 (ENSCPOG00000001501)	ENSCPOG00000002862	SH3YL1 (ENSCPOG00000020224)	ENSCPOG00000033594	ENSCPOG00000015266	ENSCPOG00000011233	ENSCPOG00000026998	ENSCPOG00000035319	ENSCPOG00000024700	ENSCPOG00000030164
Hystricomorpha_b	ANCESTRAL SPECIES	91	ENSGT00940000155623 #37	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Long-tailed chinchilla	MODERN SPECIES	194	PXDN (ENSCLAG00000001727)	MYT1L (ENSCLAG00000001644)	ENSCLAG00000001592	EIPR1 (ENSCLAG00000002535) #7	TRAPPC12 (ENSCLAG00000002486) #8	ADI1 (ENSCLAG00000002464) #9	RNASEH1 (ENSCLAG00000002440) #10	RPS7 (ENSCLAG00000002424)	COLEC11 (ENSCLAG00000002289) #11	ALLC (ENSCLAG00000002247) #12	DCDC2C (ENSCLAG00000002204) #15	SOX11 (ENSCLAG00000002180) #18	CMPK2 (ENSCLAG00000002165) #19	RSAD2 (ENSCLAG00000002145) #20	RNF144A (ENSCLAG00000002032) #21	ID2 (ENSCLAG00000001869) #22	KIDINS220 (ENSCLAG00000001859) #24	MBOAT2 (ENSCLAG00000001827) #25	SNTG2 (ENSCLAG00000001745)	TPO (ENSCLAG00000001674)	TMEM18 (ENSCLAG00000001654)	ALKAL2 (ENSCLAG00000001643)	ACP1 (ENSCLAG00000001589)	SH3YL1 (ENSCLAG00000001563)	ENSCLAG00000001535
Degu	MODERN SPECIES	245										ENSODEG00000018607	ENSODEG00000000593	SOX11 (ENSODEG00000000568) #18	CMPK2 (ENSODEG00000000539) #19	RSAD2 (ENSODEG00000000506) #20	RNF144A (ENSODEG00000000489) #21	ID2 (ENSODEG00000000480) #22	KIDINS220 (ENSODEG00000000415) #24	MBOAT2 (ENSODEG00000000353) #25	SNTG2 (ENSODEG00000000324)	TPO (ENSODEG00000000292)	TMEM18 (ENSODEG00000000266)	ALKAL2 (ENSODEG00000000931)	ACP1 (ENSODEG00000000890)	ENSODEG00000000841	ENSODEG00000018660
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000003520	MYT1L (ENSHGLG00000003552)	EIPR1 (ENSHGLG00000007917) #7	TRAPPC12 (ENSHGLG00000019579) #8	Adi1 (ENSHGLG00000044763) #9	RNASEH1 (ENSHGLG00000043933) #10	Rps7 (ENSHGLG00000002534)	COLEC11 (ENSHGLG00000002302) #11	ENSHGLG00000002847	ENSHGLG00000004440	SOX11 (ENSHGLG00000036486) #18	CMPK2 (ENSHGLG00000000515) #19	RSAD2 (ENSHGLG00000000447) #20	RNF144A (ENSHGLG00000000432) #21	ENSHGLG00000048074	ID2 (ENSHGLG00000039879) #22	KIDINS220 (ENSHGLG00000000883) #24	ENSHGLG00000000976 #25	ENSHGLG00000001990	ENSHGLG00000001538	ENSHGLG00000001358	ENSHGLG00000001190	ENSHGLG00000045756	ENSHGLG00000001117	ENSHGLG00000001267	ENSHGLG00000048658	ENSHGLG00000041553	ENSHGLG00000037695	ENSHGLG00000045838	ENSHGLG00000032400	ENSHGLG00000035188
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000156464 #22
Rabbit	MODERN SPECIES	768																ID2 (ENSOCUG00000024446) #22
Pika	MODERN SPECIES	8374																ID2 (ENSOPRG00000003784) #22
Tree shrew	MODERN SPECIES	7495																ID2 (ENSTBEG00000012464) #22
Primates	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.e.a #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Lemuriformes_a	ANCESTRAL SPECIES	10				ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.e.a #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Greater bamboo lemur	MODERN SPECIES	430										ALLC (ENSPSMG00000020625) #12	DCDC2C (ENSPSMG00000020594) #15	SOX11 (ENSPSMG00000020583) #18	CMPK2 (ENSPSMG00000020579) #19	RNF144A (ENSPSMG00000020570) #21	ENSPSMG00000020553	ID2 (ENSPSMG00000020546) #22	KIDINS220 (ENSPSMG00000020495) #24	MBOAT2 (ENSPSMG00000020319) #25	ASAP2 (ENSPSMG00000020266) #37	ENSPSMG00000020223 #36	CPSF3 (ENSPSMG00000020174) #35	IAH1 (ENSPSMG00000020104) #34	ADAM17 (ENSPSMG00000020083) #33	YWHAQ (ENSPSMG00000020036) #32	TAF1B (ENSPSMG00000019984) #31	GRHL1 (ENSPSMG00000019897) #29	KLF11 (ENSPSMG00000019846) #28	CYS1 (ENSPSMG00000019836) #27	RRM2 (ENSPSMG00000019823) #26	HPCAL1 (ENSPSMG00000019803)	ODC1 (ENSPSMG00000019773)
Coquerels sifaka	MODERN SPECIES	178												SOX11 (ENSPCOG00000027861) #18	CMPK2 (ENSPCOG00000026777) #19	RSAD2 (ENSPCOG00000009941) #20	RNF144A (ENSPCOG00000022449) #21	ID2 (ENSPCOG00000027288) #22	KIDINS220 (ENSPCOG00000004733) #24	ENSPCOG00000021299	MBOAT2 (ENSPCOG00000009724) #25	ASAP2 (ENSPCOG00000019755) #37	ENSPCOG00000023364 #36	CPSF3 (ENSPCOG00000023016) #35	IAH1 (ENSPCOG00000023355) #34	ADAM17 (ENSPCOG00000027775) #33	ENSPCOG00000023761	YWHAQ (ENSPCOG00000027184) #32
Mouse lemur	MODERN SPECIES	30	EIPR1 (ENSMICG00000009793) #7	TRAPPC12 (ENSMICG00000030035) #8	ADI1 (ENSMICG00000046745) #9	RNASEH1 (ENSMICG00000033156) #10	ENSMICG00000031923	COLEC11 (ENSMICG00000037566) #11	ALLC (ENSMICG00000016182) #12	DCDC2C (ENSMICG00000044531) #15	ENSMICG00000032327	ENSMICG00000041516	SOX11 (ENSMICG00000026777) #18	ENSMICG00000038260	CMPK2 (ENSMICG00000035731) #19	RSAD2 (ENSMICG00000000161) #20	RNF144A (ENSMICG00000006187) #21	ID2 (ENSMICG00000033026) #22	KIDINS220 (ENSMICG00000010065) #24	MBOAT2 (ENSMICG00000010098) #25	ASAP2 (ENSMICG00000002345) #37	ITGB1BP1 (ENSMICG00000002359) #36	CPSF3 (ENSMICG00000002363) #35	IAH1 (ENSMICG00000002377) #34	ADAM17 (ENSMICG00000002380) #33	YWHAQ (ENSMICG00000000973) #32	ENSMICG00000045104	SLC66A3 (ENSMICG00000043387)	TAF1B (ENSMICG00000012714) #31	GRHL1 (ENSMICG00000012737) #29	KLF11 (ENSMICG00000012761) #28	CYS1 (ENSMICG00000027772) #27	ENSMICG00000012789 #26
Bushbaby	MODERN SPECIES	137																ID2 (ENSOGAG00000012565) #22	KIDINS220 (ENSOGAG00000012566) #24	MBOAT2 (ENSOGAG00000034475) #25	ENSOGAG00000034565	ENSOGAG00000034773	ASAP2 (ENSOGAG00000001677) #37	ITGB1BP1 (ENSOGAG00000001679) #36	CPSF3 (ENSOGAG00000001680) #35	IAH1 (ENSOGAG00000000544) #34	ADAM17 (ENSOGAG00000000546) #33	YWHAQ (ENSOGAG00000000547) #32	TAF1B (ENSOGAG00000014337) #31	GRHL1 (ENSOGAG00000014342) #29	KLF11 (ENSOGAG00000026035) #28	ENSOGAG00000028490	RRM2 (ENSOGAG00000007075) #26
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	6383																ENSTSYG00000026935 #22	KIDINS220 (ENSTSYG00000013612) #24	MBOAT2 (ENSTSYG00000001803) #25
Tarsier	MODERN SPECIES	619																ENSTSYG00000001685 #22
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.g #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Hominidae	ANCESTRAL SPECIES	19	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.g #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.g #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.g #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.w.a #26
Pan	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.g #10	ENSGT00390000014122.i.b.a.b.x	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.w.a #26
Chimpanzee	MODERN SPECIES	14	TPO (ENSPTRG00000049999)	PXDN (ENSPTRG00000011612)	MYT1L (ENSPTRG00000011611)	EIPR1 (ENSPTRG00000011621) #7	TRAPPC12 (ENSPTRG00000011622) #8	ADI1 (ENSPTRG00000011624) #9	RNASEH1 (ENSPTRG00000011614) #10	RPS7 (ENSPTRG00000011615)	COLEC11 (ENSPTRG00000011616) #11	ALLC (ENSPTRG00000011618) #12	DCDC2C (ENSPTRG00000033961) #15	SOX11 (ENSPTRG00000045174) #18	CMPK2 (ENSPTRG00000011627) #19	RSAD2 (ENSPTRG00000011629) #20	RNF144A (ENSPTRG00000011630) #21	ID2 (ENSPTRG00000011632) #22	KIDINS220 (ENSPTRG00000011633) #24	MBOAT2 (ENSPTRG00000011634) #25	ASAP2 (ENSPTRG00000011636) #37	ENSPTRG00000043418	ITGB1BP1 (ENSPTRG00000011637) #36	CPSF3 (ENSPTRG00000011638) #35	IAH1 (ENSPTRG00000011639) #34	ADAM17 (ENSPTRG00000011640) #33	YWHAQ (ENSPTRG00000011641) #32	TAF1B (ENSPTRG00000011642) #31	GRHL1 (ENSPTRG00000011643) #29	KLF11 (ENSPTRG00000011645) #28	ENSPTRG00000046195	CYS1 (ENSPTRG00000030565) #27	RRM2 (ENSPTRG00000042985) #26
Bonobo	MODERN SPECIES	14	PXDN (ENSPPAG00000043456)	MYT1L (ENSPPAG00000021774)	EIPR1 (ENSPPAG00000018834) #7	TRAPPC12 (ENSPPAG00000026974) #8	ADI1 (ENSPPAG00000033298) #9	RNASEH1 (ENSPPAG00000034221) #10	RPS7 (ENSPPAG00000039898)	COLEC11 (ENSPPAG00000038334) #11	ALLC (ENSPPAG00000043709) #12	DCDC2C (ENSPPAG00000035755) #15	ENSPPAG00000031455	ENSPPAG00000036968	ENSPPAG00000037362	RSAD2 (ENSPPAG00000039493) #20	RNF144A (ENSPPAG00000037389) #21	ID2 (ENSPPAG00000034410) #22	KIDINS220 (ENSPPAG00000041858) #24	MBOAT2 (ENSPPAG00000043445) #25	ENSPPAG00000043888	ASAP2 (ENSPPAG00000008883) #37	ITGB1BP1 (ENSPPAG00000039328) #36	CPSF3 (ENSPPAG00000042457) #35	IAH1 (ENSPPAG00000033783) #34	ADAM17 (ENSPPAG00000038185) #33	ENSPPAG00000043019 ##32	TAF1B (ENSPPAG00000031684) #31	GRHL1 (ENSPPAG00000030977) #29	KLF11 (ENSPPAG00000030099) #28	ENSPPAG00000010181	RRM2 (ENSPPAG00000040070) #26	HPCAL1 (ENSPPAG00000032513)
Human	MODERN SPECIES	11	TPO (ENSG00000115705)	PXDN (ENSG00000130508)	MYT1L (ENSG00000186487)	EIPR1 (ENSG00000032389) #7	TRAPPC12 (ENSG00000171853) #8	ADI1 (ENSG00000182551) #9	RNASEH1 (ENSG00000171865) #10	RPS7 (ENSG00000171863)	COLEC11 (ENSG00000118004) #11	ALLC (ENSG00000151360) #12	DCDC2C (ENSG00000214866) #15	SOX11 (ENSG00000176887) #18	CMPK2 (ENSG00000134326) #19	RSAD2 (ENSG00000134321) #20	RNF144A (ENSG00000151692) #21	ID2 (ENSG00000115738) #22	KIDINS220 (ENSG00000134313) #24	MBOAT2 (ENSG00000143797) #25	ASAP2 (ENSG00000151693) #37	ITGB1BP1 (ENSG00000119185) #36	CPSF3 (ENSG00000119203) #35	IAH1 (ENSG00000134330) #34	ADAM17 (ENSG00000151694) #33	YWHAQ (ENSG00000134308) #32	TAF1B (ENSG00000115750) #31	GRHL1 (ENSG00000134317) #29	KLF11 (ENSG00000172059) #28	CYS1 (ENSG00000205795) #27	RRM2 (ENSG00000171848) #26	HPCAL1 (ENSG00000115756)	ODC1 (ENSG00000115758)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660
Pan	ANCESTRAL SPECIES	2	ENSGT00910000146882	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00390000004428.a.g.b.c.a.a	ENSGT00940000155143.x	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b
Bonobo	MODERN SPECIES	16	ENSPPAG00000032911	ENSPPAG00000023910	ADAMTS9 (ENSPPAG00000027506)	PRICKLE2 (ENSPPAG00000036788)	PSMD6 (ENSPPAG00000008985)	ATXN7 (ENSPPAG00000038542)	THOC7 (ENSPPAG00000044086)	C3orf49 (ENSPPAG00000044092)	ENSPPAG00000014773	SYNPR (ENSPPAG00000037002)	ENSPPAG00000034871	ENSPPAG00000033241	ENSPPAG00000037095	FEZF2 (ENSPPAG00000039379)	C3orf14 (ENSPPAG00000033418)	ENSPPAG00000005174 #22	ENSPPAG00000027644	PTPRG (ENSPPAG00000036859)	ENSPPAG00000015559	ENSPPAG00000034829	ENSPPAG00000037040	ENSPPAG00000004830	CFAP20DC (ENSPPAG00000037900)	FAM3D (ENSPPAG00000033729)	FAM107A (ENSPPAG00000043565)	ACOX2 (ENSPPAG00000029182)	KCTD6 (ENSPPAG00000031362)	PDHB (ENSPPAG00000028933)	PXK (ENSPPAG00000027245)	HTD2 (ENSPPAG00000036591)	RPP14 (ENSPPAG00000041153)
Chimpanzee	MODERN SPECIES	16	ENSPTRG00000046672	MAGI1 (ENSPTRG00000015083)	ADAMTS9 (ENSPTRG00000015082)	PRICKLE2 (ENSPTRG00000015081)	PSMD6 (ENSPTRG00000015078)	ATXN7 (ENSPTRG00000015077)	THOC7 (ENSPTRG00000015076)	C3H3orf49 (ENSPTRG00000015075)	SNTN (ENSPTRG00000015074)	SYNPR (ENSPTRG00000015073)	ENSPTRG00000051485	ENSPTRG00000052322	CADPS (ENSPTRG00000015072)	FEZF2 (ENSPTRG00000015071)	C3H3orf14 (ENSPTRG00000015070)	ENSPTRG00000038955 #22	ENSPTRG00000051643	PTPRG (ENSPTRG00000015067)	ENSPTRG00000047476	ENSPTRG00000043102	FHIT (ENSPTRG00000015065)	ENSPTRG00000034348	CFAP20DC (ENSPTRG00000015064)	FAM3D (ENSPTRG00000022801)	FAM107A (ENSPTRG00000015062)	ACOX2 (ENSPTRG00000015061)	KCTD6 (ENSPTRG00000015060)	PDHB (ENSPTRG00000015059)	PXK (ENSPTRG00000015058)	HTD2 (ENSPTRG00000040419)	RPP14 (ENSPTRG00000048740)
Gorilla	MODERN SPECIES	16	ENSGGOG00000042398	MAGI1 (ENSGGOG00000004958)	ADAMTS9 (ENSGGOG00000015540)	PRICKLE2 (ENSGGOG00000006935)	PSMD6 (ENSGGOG00000004430)	ATXN7 (ENSGGOG00000012900)	THOC7 (ENSGGOG00000024282)	C3orf49 (ENSGGOG00000012760)	SNTN (ENSGGOG00000012870)	SYNPR (ENSGGOG00000002513)	ENSGGOG00000037389	ENSGGOG00000042564	ENSGGOG00000015194	ENSGGOG00000026200	C3orf14 (ENSGGOG00000043774)	ENSGGOG00000022395 #22	ENSGGOG00000026144	PTPRG (ENSGGOG00000006858)	FHIT (ENSGGOG00000042949)	CFAP20DC (ENSGGOG00000034942)	FAM3D (ENSGGOG00000015448)	FAM107A (ENSGGOG00000015452)	ACOX2 (ENSGGOG00000015441)	KCTD6 (ENSGGOG00000010706)	PDHB (ENSGGOG00000013150)	PXK (ENSGGOG00000015022)	HTD2 (ENSGGOG00000040783)	RPP14 (ENSGGOG00000016164)	ABHD6 (ENSGGOG00000015826)	DNASE1L3 (ENSGGOG00000010072)	FLNB (ENSGGOG00000010039)
Orangutan	MODERN SPECIES	14	MYT1L (ENSPPYG00000012686)	ENSPPYG00000040708	EIPR1 (ENSPPYG00000012685) #7	TRAPPC12 (ENSPPYG00000012684) #8	ENSPPYG00000012683 #9	RNASEH1 (ENSPPYG00000025873) #10	RPS7 (ENSPPYG00000025872)	COLEC11 (ENSPPYG00000012682) #11	ALLC (ENSPPYG00000012681) #12	ENSPPYG00000012680 #15	SOX11 (ENSPPYG00000036338) #18	CMPK2 (ENSPPYG00000012675) #19	RSAD2 (ENSPPYG00000012674) #20	RNF144A (ENSPPYG00000012673) #21	ENSPPYG00000030180	ID2 (ENSPPYG00000012719) #22	KIDINS220 (ENSPPYG00000012670) #24	MBOAT2 (ENSPPYG00000012669) #25	ENSPPYG00000037864	ASAP2 (ENSPPYG00000012668) #37	ITGB1BP1 (ENSPPYG00000031588) #36	CPSF3 (ENSPPYG00000012666) #35	IAH1 (ENSPPYG00000012665) #34	ADAM17 (ENSPPYG00000012664) #33	YWHAQ (ENSPPYG00000012663) #32	TAF1B (ENSPPYG00000012662) #31	GRHL1 (ENSPPYG00000012661) #29	KLF11 (ENSPPYG00000012659) #28	CYS1 (ENSPPYG00000012657) #27	RRM2 (ENSPPYG00000012656) #26	HPCAL1 (ENSPPYG00000012655)
Gibbon	MODERN SPECIES	9	TPO (ENSNLEG00000008418)	PXDN (ENSNLEG00000008442)	MYT1L (ENSNLEG00000008466)	EIPR1 (ENSNLEG00000007514) #7	TRAPPC12 (ENSNLEG00000007515) #8	ADI1 (ENSNLEG00000007518) #9	RNASEH1 (ENSNLEG00000015400) #10	RPS7 (ENSNLEG00000034280)	ENSNLEG00000031083 #11	ALLC (ENSNLEG00000015418) #12	DCDC2C (ENSNLEG00000015424) #15	ENSNLEG00000031381 #19	RSAD2 (ENSNLEG00000015429) #20	RNF144A (ENSNLEG00000015431) #21	ENSNLEG00000035496	ID2 (ENSNLEG00000013192) #22	KIDINS220 (ENSNLEG00000013206) #24	MBOAT2 (ENSNLEG00000013229) #25	ASAP2 (ENSNLEG00000013248) #37	ENSNLEG00000032390	ITGB1BP1 (ENSNLEG00000013322) #36	CPSF3 (ENSNLEG00000013359) #35	IAH1 (ENSNLEG00000013435) #34	ADAM17 (ENSNLEG00000013455) #33	ENSNLEG00000034153	YWHAQ (ENSNLEG00000013534) #32	TAF1B (ENSNLEG00000013577) #31	GRHL1 (ENSNLEG00000013634) #29	KLF11 (ENSNLEG00000013701) #28	ENSNLEG00000031300	ENSNLEG00000031728 #27
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Vervet Monkey	MODERN SPECIES	5	PXDN (ENSCSAG00000006916)	MYT1L (ENSCSAG00000006922)	EIPR1 (ENSCSAG00000006928) #7	TRAPPC12 (ENSCSAG00000006934) #8	ADI1 (ENSCSAG00000006938) #9	RNASEH1 (ENSCSAG00000006943) #10	RPS7 (ENSCSAG00000006946)	COLEC11 (ENSCSAG00000006951) #11	ALLC (ENSCSAG00000006987) #12	DCDC2C (ENSCSAG00000007016) #15	SOX11 (ENSCSAG00000000373) #18	ENSCSAG00000007025	CMPK2 (ENSCSAG00000007040) #19	RSAD2 (ENSCSAG00000007051) #20	RNF144A (ENSCSAG00000007058) #21	ID2 (ENSCSAG00000007060) #22	KIDINS220 (ENSCSAG00000007084) #24	MBOAT2 (ENSCSAG00000007093) #25	ASAP2 (ENSCSAG00000007108) #37	ITGB1BP1 (ENSCSAG00000007115) #36	CPSF3 (ENSCSAG00000007125) #35	IAH1 (ENSCSAG00000007130) #34	ADAM17 (ENSCSAG00000007138) #33	ENSCSAG00000007145 ##32	TAF1B (ENSCSAG00000007150) #31	GRHL1 (ENSCSAG00000007158) #29	KLF11 (ENSCSAG00000007163) #28	CYS1 (ENSCSAG00000007167) #27	ENSCSAG00000007172	RRM2 (ENSCSAG00000007201) #26	HPCAL1 (ENSCSAG00000007213)
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Macaca	ANCESTRAL SPECIES	17	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.j	ENSGT00940000159468 #11	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.b	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000170471.A.b.b.a.b.b	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a	ENSGT00940000154030.a.b #19	ENSGT00910000148182	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.b ##32	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.w.a #26	ENSGT00940000163505.b.b.b.b.b
Crab-eating macaque	MODERN SPECIES	4	TRAPPC12 (ENSMFAG00000045483) #8	ADI1 (ENSMFAG00000040320) #9	RNASEH1 (ENSMFAG00000000063) #10	ALLC (ENSMFAG00000000829) #12	ENSMFAG00000042581	DCDC2C (ENSMFAG00000042487) #15	ENSMFAG00000061013	ENSMFAG00000057748	ENSMFAG00000049271	ENSMFAG00000060203	ENSMFAG00000048573	ENSMFAG00000049943	RSAD2 (ENSMFAG00000055130) #20	RNF144A (ENSMFAG00000040034) #21	ENSMFAG00000057704	ID2 (ENSMFAG00000000039) #22	KIDINS220 (ENSMFAG00000031830) #24	MBOAT2 (ENSMFAG00000003741) #25	ASAP2 (ENSMFAG00000037845) #37	ITGB1BP1 (ENSMFAG00000045554) #36	CPSF3 (ENSMFAG00000001339) #35	IAH1 (ENSMFAG00000039055) #34	ADAM17 (ENSMFAG00000039177) #33	ENSMFAG00000004741 ##32	TAF1B (ENSMFAG00000041401) #31	GRHL1 (ENSMFAG00000032356) #29	KLF11 (ENSMFAG00000039490) #28	ENSMFAG00000052007	RRM2 (ENSMFAG00000040783) #26	HPCAL1 (ENSMFAG00000044146)	ENSMFAG00000038147
Rhesus	MODERN SPECIES	4	EIPR1 (ENSMMUG00000022879) #7	TRAPPC12 (ENSMMUG00000019468) #8	ADI1 (ENSMMUG00000019471) #9	RNASEH1 (ENSMMUG00000014475) #10	RPS7 (ENSMMUG00000011870)	ALLC (ENSMMUG00000004632) #12	DCDC2C (ENSMMUG00000023273) #15	ENSMMUG00000052757	ENSMMUG00000061676	SOX11 (ENSMMUG00000038367) #18	ENSMMUG00000058497	CMPK2 (ENSMMUG00000015968) #19	ENSMMUG00000050777	RSAD2 (ENSMMUG00000015969) #20	RNF144A (ENSMMUG00000045908) #21	ID2 (ENSMMUG00000003237) #22	KIDINS220 (ENSMMUG00000021036) #24	MBOAT2 (ENSMMUG00000021037) #25	ASAP2 (ENSMMUG00000018033) #37	ITGB1BP1 (ENSMMUG00000018036)	CPSF3 (ENSMMUG00000018038) #35	IAH1 (ENSMMUG00000018045) #34	ADAM17 (ENSMMUG00000012921) #33	ENSMMUG00000062403	YWHAQ (ENSMMUG00000006965) #32	TAF1B (ENSMMUG00000001530) #31	GRHL1 (ENSMMUG00000001535) #29	KLF11 (ENSMMUG00000002054) #28	CYS1 (ENSMMUG00000030941) #27	RRM2 (ENSMMUG00000002057) #26	ENSMMUG00000053871
Pig-tailed macaque	MODERN SPECIES	127											SOX11 (ENSMNEG00000008816) #18	ENSMNEG00000032217	CMPK2 (ENSMNEG00000018646) #19	RSAD2 (ENSMNEG00000040478) #20	RNF144A (ENSMNEG00000030505) #21	ID2 (ENSMNEG00000039277) #22	KIDINS220 (ENSMNEG00000044570) #24	MBOAT2 (ENSMNEG00000036853) #25	ENSMNEG00000042727	ASAP2 (ENSMNEG00000020414) #37	ITGB1BP1 (ENSMNEG00000043390) #36	CPSF3 (ENSMNEG00000039447) #35	IAH1 (ENSMNEG00000038428) #34	ENSMNEG00000039629	ADAM17 (ENSMNEG00000031025) #33	YWHAQ (ENSMNEG00000035884) #32	TAF1B (ENSMNEG00000007382) #31	GRHL1 (ENSMNEG00000030598) #29	KLF11 (ENSMNEG00000034723) #28	ENSMNEG00000018854	CYS1 (ENSMNEG00000030186) #27
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.w.a #26
Olive baboon	MODERN SPECIES	5	EIPR1 (ENSPANG00000007706) #7	ENSPANG00000039830	TRAPPC12 (ENSPANG00000022110) #8	ENSPANG00000012606	ADI1 (ENSPANG00000021603) #9	RNASEH1 (ENSPANG00000000443) #10	ENSPANG00000011092	COLEC11 (ENSPANG00000011091) #11	ALLC (ENSPANG00000017775) #12	DCDC2C (ENSPANG00000007153) #15	SOX11 (ENSPANG00000041661) #18	ENSPANG00000051199	CMPK2 (ENSPANG00000026237) #19	RSAD2 (ENSPANG00000026240) #20	RNF144A (ENSPANG00000023570) #21	ID2 (ENSPANG00000039736) #22	KIDINS220 (ENSPANG00000021602) #24	MBOAT2 (ENSPANG00000022343) #25	ASAP2 (ENSPANG00000023973) #37	ITGB1BP1 (ENSPANG00000016797) #36	CPSF3 (ENSPANG00000016798) #35	IAH1 (ENSPANG00000009398) #34	ADAM17 (ENSPANG00000000727) #33	YWHAQ (ENSPANG00000037411) #32	TAF1B (ENSPANG00000013803) #31	GRHL1 (ENSPANG00000020814) #29	ENSPANG00000031829	CYS1 (ENSPANG00000005251) #27	RRM2 (ENSPANG00000018767) #26	ENSPANG00000044848	HPCAL1 (ENSPANG00000042769)
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.e #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.x #26
Sooty mangabey	MODERN SPECIES	121	PXDN (ENSCATG00000027538)	MYT1L (ENSCATG00000036695)	EIPR1 (ENSCATG00000029523) #7	TRAPPC12 (ENSCATG00000034861) #8	ADI1 (ENSCATG00000014947) #9	ENSCATG00000016515 #10	RPS7 (ENSCATG00000029336)	COLEC11 (ENSCATG00000029509) #11	ALLC (ENSCATG00000030695) #12	DCDC2C (ENSCATG00000025057) #15	SOX11 (ENSCATG00000020144) #18	ENSCATG00000018474	CMPK2 (ENSCATG00000040689) #19	RSAD2 (ENSCATG00000030147) #20	RNF144A (ENSCATG00000033975) #21	ID2 (ENSCATG00000030248) #22	KIDINS220 (ENSCATG00000041275) #24	MBOAT2 (ENSCATG00000040596) #25	ENSCATG00000011380	ASAP2 (ENSCATG00000035990) #37	ITGB1BP1 (ENSCATG00000036040) #36	CPSF3 (ENSCATG00000014770) #35	IAH1 (ENSCATG00000029613) #34	ADAM17 (ENSCATG00000037482) #33	ENSCATG00000023335 #32	TAF1B (ENSCATG00000039789) #31	GRHL1 (ENSCATG00000027324) #29	KLF11 (ENSCATG00000037396) #28	ENSCATG00000033874	CYS1 (ENSCATG00000014723) #27	ENSCATG00000031151 #26
Drill	MODERN SPECIES	1452																ID2 (ENSMLEG00000040695) #22	KIDINS220 (ENSMLEG00000035601) #24	MBOAT2 (ENSMLEG00000037301) #25	ENSMLEG00000040215	ASAP2 (ENSMLEG00000033183) #37	ITGB1BP1 (ENSMLEG00000031967) #36	CPSF3 (ENSMLEG00000026825) #35	IAH1 (ENSMLEG00000044290) #34	ADAM17 (ENSMLEG00000042175) #33	YWHAQ (ENSMLEG00000030005) #32	TAF1B (ENSMLEG00000043999) #31	GRHL1 (ENSMLEG00000036453) #29	KLF11 (ENSMLEG00000036570) #28	ENSMLEG00000042927	ENSMLEG00000035635 #26	HPCAL1 (ENSMLEG00000039247)
Rhinopithecus	ANCESTRAL SPECIES	174																ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990.a #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00910000147368	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a.w.a #26	ENSGT00940000154645.A
Golden snub-nosed monkey	MODERN SPECIES	2175																ID2 (ENSRROG00000004887) #22	KIDINS220 (ENSRROG00000036660) #24	MBOAT2 (ENSRROG00000045314) #25	ENSRROG00000033889	ENSRROG00000035274	ASAP2 (ENSRROG00000042260) #37	ENSRROG00000044107 #36	CPSF3 (ENSRROG00000033792) #35	IAH1 (ENSRROG00000034099) #34	ENSRROG00000036140	ADAM17 (ENSRROG00000038460) #33	ENSRROG00000025134	YWHAQ (ENSRROG00000044691) #32	TAF1B (ENSRROG00000024712) #31	GRHL1 (ENSRROG00000028348) #29	KLF11 (ENSRROG00000041608) #28
Black snub-nosed monkey	MODERN SPECIES	147																ID2 (ENSRBIG00000044689) #22	KIDINS220 (ENSRBIG00000035069) #24	MBOAT2 (ENSRBIG00000035711) #25	ASAP2 (ENSRBIG00000035134) #37	ENSRBIG00000034346	ENSRBIG00000039204 #36	CPSF3 (ENSRBIG00000041615) #35	IAH1 (ENSRBIG00000029112) #34	ADAM17 (ENSRBIG00000031143) #33	ENSRBIG00000023329	YWHAQ (ENSRBIG00000023381) #32	TAF1B (ENSRBIG00000028101) #31	GRHL1 (ENSRBIG00000024539) #29	KLF11 (ENSRBIG00000037952) #28	RRM2 (ENSRBIG00000033258) #26	HPCAL1 (ENSRBIG00000034017)
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990.c #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.b.b ##32	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.y.a #26
Cebidae	ANCESTRAL SPECIES	40	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990.c #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.b.b ##32	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.y.a.b #26
Marmoset	MODERN SPECIES	5	PXDN (ENSCJAG00000051702)	MYT1L (ENSCJAG00000007286)	EIPR1 (ENSCJAG00000007858) #7	TRAPPC12 (ENSCJAG00000007867) #8	ENSCJAG00000007906 #9	RNASEH1 (ENSCJAG00000035450) #10	ENSCJAG00000016462	COLEC11 (ENSCJAG00000016457) #11	ENSCJAG00000065738	ENSCJAG00000078912	DCDC2C (ENSCJAG00000083758) #15	SOX11 (ENSCJAG00000038240) #18	CMPK2 (ENSCJAG00000085281) #19	RSAD2 (ENSCJAG00000010219) #20	RNF144A (ENSCJAG00000010225) #21	ENSCJAG00000006037 #22	KIDINS220 (ENSCJAG00000006054) #24	ENSCJAG00000053616	MBOAT2 (ENSCJAG00000006207) #25	ASAP2 (ENSCJAG00000006233) #37	ENSCJAG00000006250 #36	CPSF3 (ENSCJAG00000006276) #35	IAH1 (ENSCJAG00000006360) #34	ADAM17 (ENSCJAG00000006369) #33	ENSCJAG00000062528	YWHAQ (ENSCJAG00000040849) ##32	TAF1B (ENSCJAG00000006420) #31	GRHL1 (ENSCJAG00000006431) #29	KLF11 (ENSCJAG00000046813) #28	ENSCJAG00000006533 #26	HPCAL1 (ENSCJAG00000041528)
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000015789.c.b	ENSGT00940000155623 #37	ENSGT00390000003990.c #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.b.b ##32	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a.y.a.b #26
Capuchin	MODERN SPECIES	1																ID2 (ENSCCAG00000034943) #22	KIDINS220 (ENSCCAG00000035619) #24	MBOAT2 (ENSCCAG00000028053) #25	ASAP2 (ENSCCAG00000033861) #37	ITGB1BP1 (ENSCCAG00000036127) #36	CPSF3 (ENSCCAG00000036730) #35	ENSCCAG00000010701	IAH1 (ENSCCAG00000034153) #34	ADAM17 (ENSCCAG00000035481) #33	ENSCCAG00000001935	YWHAQ (ENSCCAG00000031746) #32	TAF1B (ENSCCAG00000031135) #31	GRHL1 (ENSCCAG00000022259) #29	KLF11 (ENSCCAG00000026312) #28	CYS1 (ENSCCAG00000028829) #27	ENSCCAG00000009364 #26
Bolivian squirrel monkey	MODERN SPECIES	63												ENSSBOG00000029283	ENSSBOG00000028588 #19	RSAD2 (ENSSBOG00000024280) #20	RNF144A (ENSSBOG00000019246) #21	ID2 (ENSSBOG00000033610) #22	KIDINS220 (ENSSBOG00000026153) #24	MBOAT2 (ENSSBOG00000034820) #25	ENSSBOG00000029937	ASAP2 (ENSSBOG00000021237) #37	ENSSBOG00000031545 #36	CPSF3 (ENSSBOG00000027263) #35	IAH1 (ENSSBOG00000019617) #34	ADAM17 (ENSSBOG00000035331) #33	ENSSBOG00000033831 ##32	TAF1B (ENSSBOG00000028943) #31	GRHL1 (ENSSBOG00000011486) #29	KLF11 (ENSSBOG00000018899) #28	ENSSBOG00000022360 #26	HPCAL1 (ENSSBOG00000026513)	ODC1 (ENSSBOG00000034688)
Mas night monkey	MODERN SPECIES	1339																ID2 (ENSANAG00000035588) #22	KIDINS220 (ENSANAG00000038069) #24	MBOAT2 (ENSANAG00000037506) #25	ENSANAG00000030828	ASAP2 (ENSANAG00000023907) #37	ENSANAG00000034926 #36	CPSF3 (ENSANAG00000031254) #35	IAH1 (ENSANAG00000033141) #34	ENSANAG00000022015	ADAM17 (ENSANAG00000037496) #33	YWHAQ (ENSANAG00000026145) ##32	TAF1B (ENSANAG00000031526) #31	GRHL1 (ENSANAG00000025191) #29	KLF11 (ENSANAG00000028728) #28	ENSANAG00000025761 #26	HPCAL1 (ENSANAG00000033383)
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000162505	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Arabian camel	MODERN SPECIES	6	TMEM18 (ENSCDRG00005013178)	SNTG2 (ENSCDRG00005013218)	TPO (ENSCDRG00005013721)	PXDN (ENSCDRG00005013788)	ENSCDRG00005014272	ENSCDRG00005014339	EIPR1 (ENSCDRG00005014386) #7	TRAPPC12 (ENSCDRG00005014434) #8	ADI1 (ENSCDRG00005014498) #10	ENSCDRG00005014654	COLEC11 (ENSCDRG00005014714) #11	ALLC (ENSCDRG00005014851) #12	CMPK2 (ENSCDRG00005015247) #19	RSAD2 (ENSCDRG00005015263) #20	RNF144A (ENSCDRG00005015339) #21	ID2 (ENSCDRG00005015367) #22	KIDINS220 (ENSCDRG00005015440) #24	MBOAT2 (ENSCDRG00005016283) #25	ASAP2 (ENSCDRG00005016761) #37	ITGB1BP1 (ENSCDRG00005021375) #36	CPSF3 (ENSCDRG00005021386) #35	IAH1 (ENSCDRG00005021394) #34	ADAM17 (ENSCDRG00005021400) #33	YWHAQ (ENSCDRG00005021407) #32	ENSCDRG00005021412	TAF1B (ENSCDRG00005021414) #31	GRHL1 (ENSCDRG00005021421) #29	KLF11 (ENSCDRG00005021426) #28	RRM2 (ENSCDRG00005021436) #26	HPCAL1 (ENSCDRG00005021441)	ODC1 (ENSCDRG00005021445)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Cetacea	ANCESTRAL SPECIES	16	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195.d #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.db.b
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195.d #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.db.b
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195.d #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.db.b
Dolphin	MODERN SPECIES	3559																ID2 (ENSTTRG00000008691) #22	KIDINS220 (ENSTTRG00000008701) #24
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195.d #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.db.b
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000162505	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195.d.b #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.db.b
Beluga whale	MODERN SPECIES	37														ENSDLEG00000004773	RNF144A (ENSDLEG00000004760) #21	ID2 (ENSDLEG00000004751) #22	KIDINS220 (ENSDLEG00000004637) #24	MBOAT2 (ENSDLEG00000004585) #25	ASAP2 (ENSDLEG00000004523) #37	ITGB1BP1 (ENSDLEG00000004511) #36	CPSF3 (ENSDLEG00000004493) #35	IAH1 (ENSDLEG00000004484) #34	ENSDLEG00000004471	ADAM17 (ENSDLEG00000004858) #33	YWHAQ (ENSDLEG00000004846) #32	TAF1B (ENSDLEG00000004806) #31	GRHL1 (ENSDLEG00000004790) #29	KLF11 (ENSDLEG00000004778) #28	CYS1 (ENSDLEG00000004756) #27	ENSDLEG00000004724 #26	HPCAL1 (ENSDLEG00000004713)
Narwhal	MODERN SPECIES	305	ALKAL2 (ENSMMNG00015008804)	TMEM18 (ENSMMNG00015008793)	SNTG2 (ENSMMNG00015008757)	TPO (ENSMMNG00015008602)	PXDN (ENSMMNG00015008507)	MYT1L (ENSMMNG00015008281)	EIPR1 (ENSMMNG00015008117) #7	TRAPPC12 (ENSMMNG00015008082) #8	ADI1 (ENSMMNG00015008063) #9	RNASEH1 (ENSMMNG00015008036) #10	ENSMMNG00015008005	COLEC11 (ENSMMNG00015007976) #11	ENSMMNG00015007954	SOX11 (ENSMMNG00015007940) #18	RNF144A (ENSMMNG00015007925) #21	ID2 (ENSMMNG00015007903) #22	KIDINS220 (ENSMMNG00015007796) #24	MBOAT2 (ENSMMNG00015007697) #25	ASAP2 (ENSMMNG00015007585) #37	ITGB1BP1 (ENSMMNG00015007476) #36	CPSF3 (ENSMMNG00015007400) #35	IAH1 (ENSMMNG00015007332) #34	ADAM17 (ENSMMNG00015007247) #33	YWHAQ (ENSMMNG00015007193) #32	TAF1B (ENSMMNG00015007142) #31	GRHL1 (ENSMMNG00015007097) #29	KLF11 (ENSMMNG00015007075) #28	CYS1 (ENSMMNG00015007058) #27	ENSMMNG00015007031 #26	HPCAL1 (ENSMMNG00015007009)	ENSMMNG00015006983
Vaquita	MODERN SPECIES	4	SNTG2 (ENSPSNG00000022070)	TPO (ENSPSNG00000022166)	PXDN (ENSPSNG00000022272)	MYT1L (ENSPSNG00000022330)	EIPR1 (ENSPSNG00000022392) #7	TRAPPC12 (ENSPSNG00000022403) #8	ENSPSNG00000022415 #9	RNASEH1 (ENSPSNG00000022419) #10	ENSPSNG00000022424	COLEC11 (ENSPSNG00000022428) #11	DCDC2C (ENSPSNG00000022437) #15	SOX11 (ENSPSNG00000022450) #18	CMPK2 (ENSPSNG00000022458) #19	RSAD2 (ENSPSNG00000022461) #20	RNF144A (ENSPSNG00000022468) #21	ID2 (ENSPSNG00000022474) #22	KIDINS220 (ENSPSNG00000022485) #24	MBOAT2 (ENSPSNG00000022501) #25	ASAP2 (ENSPSNG00000022513) #37	ENSPSNG00000022534 #36	CPSF3 (ENSPSNG00000022538) #35	IAH1 (ENSPSNG00000022542) #34	ADAM17 (ENSPSNG00000022548) #33	YWHAQ (ENSPSNG00000022551) #32	TAF1B (ENSPSNG00000022554) #31	GRHL1 (ENSPSNG00000022556) #29	KLF11 (ENSPSNG00000022558) #28	CYS1 (ENSPSNG00000022560) #27	ENSPSNG00000022562 #26	HPCAL1 (ENSPSNG00000022565)	ENSPSNG00000022567
Sperm whale	MODERN SPECIES	920																ID2 (ENSPCTG00005013744) #22
Blue whale	MODERN SPECIES	4	SNTG2 (ENSBMSG00010018157)	TPO (ENSBMSG00010017590)	PXDN (ENSBMSG00010015928)	MYT1L (ENSBMSG00010014263)	EIPR1 (ENSBMSG00010013997) #7	ENSBMSG00010013971	ENSBMSG00010013937 #8	ENSBMSG00010013901 #9	RNASEH1 (ENSBMSG00010013874) #10	RPS7 (ENSBMSG00010019975)	COLEC11 (ENSBMSG00010019717) #11	DCDC2C (ENSBMSG00010019611) #15	CMPK2 (ENSBMSG00010019458) #19	RSAD2 (ENSBMSG00010019426) #20	RNF144A (ENSBMSG00010019394) #21	ID2 (ENSBMSG00010019337) #22	KIDINS220 (ENSBMSG00010019274) #24	MBOAT2 (ENSBMSG00010019136) #25	ASAP2 (ENSBMSG00010019066) #37	ENSBMSG00010019013 #36	CPSF3 (ENSBMSG00010018925) #35	ENSBMSG00010018884 #34	ADAM17 (ENSBMSG00010018804) #33	YWHAQ (ENSBMSG00010018734) #32	ENSBMSG00010018704	TAF1B (ENSBMSG00010018671) #31	ENSBMSG00010018631 #29	ENSBMSG00010018599 #29	KLF11 (ENSBMSG00010018472) #28	CYS1 (ENSBMSG00010018428) #27	RRM2 (ENSBMSG00010018407) #26
Pecora	ANCESTRAL SPECIES	5	ENSGT00910000145076	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.fb.a
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.fb.a
Bovidae	ANCESTRAL SPECIES	5	ENSGT00910000145076	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.fb.a
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES	9	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000154706.ib	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.a #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699.d #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.fb.a.a
Rambouillet Sheep	MODERN SPECIES	19	MRRF (ENSOARG00020014233)	RBM18 (ENSOARG00020014399)	LHX6 (ENSOARG00020014452)	MORN5 (ENSOARG00020014653)	NDUFA8 (ENSOARG00020014774)	ENSOARG00020014819	DAB2IP (ENSOARG00020014930)	ENSOARG00020015864	ENSOARG00020016051	ENSOARG00020016131	ENSOARG00020006554	ENSOARG00020006589 #20	CMPK2 (ENSOARG00020006720) #19	ENSOARG00020006787 #20	RNF144A (ENSOARG00020006856) #21	ID2 (ENSOARG00020006940) #22	KIDINS220 (ENSOARG00020007030) #24	MBOAT2 (ENSOARG00020007653) #25	ASAP2 (ENSOARG00020007758) #37	ITGB1BP1 (ENSOARG00020008178) #36	CPSF3 (ENSOARG00020008301) #35	IAH1 (ENSOARG00020008401) #34	ADAM17 (ENSOARG00020008512) #33	YWHAQ (ENSOARG00020008682) #32	TAF1B (ENSOARG00020008727) #31	GRHL1 (ENSOARG00020008773) #29	KLF11 (ENSOARG00020008965) #28	CYS1 (ENSOARG00020009035) #27	ENSOARG00020009097 #26	HPCAL1 (ENSOARG00020009151)	ODC1 (ENSOARG00020009225)
Goat	MODERN SPECIES	2	RBM18 (ENSCHIG00000026444)	LHX6 (ENSCHIG00000012218)	MORN5 (ENSCHIG00000025363)	NDUFA8 (ENSCHIG00000023321)	TTLL11 (ENSCHIG00000016558)	DAB2IP (ENSCHIG00000006785)	ENSCHIG00000023562	ENSCHIG00000009248	ENSCHIG00000023895	ENSCHIG00000021333	ENSCHIG00000014881	SOX11 (ENSCHIG00000024868) #18	CMPK2 (ENSCHIG00000012790) #19	RSAD2 (ENSCHIG00000021832) #20	RNF144A (ENSCHIG00000016336) #21	ENSCHIG00000018361 #22	KIDINS220 (ENSCHIG00000026710) #24	MBOAT2 (ENSCHIG00000026251) #25	ENSCHIG00000012410	ASAP2 (ENSCHIG00000022796) #37	ENSCHIG00000020028 #36	CPSF3 (ENSCHIG00000013973) #35	IAH1 (ENSCHIG00000016467) #34	ADAM17 (ENSCHIG00000013595) #33	YWHAQ (ENSCHIG00000012589) #32	ENSCHIG00000012158	TAF1B (ENSCHIG00000013783) #31	ENSCHIG00000026755 #29	KLF11 (ENSCHIG00000011294) #28	CYS1 (ENSCHIG00000018115) #27	ENSCHIG00000004531
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000156464.b #22
Goat	MODERN SPECIES	22	KDM4A (ENSCHIG00000013137)	ST3GAL3 (ENSCHIG00000025175)	ARTN (ENSCHIG00000020016)	IPO13 (ENSCHIG00000008341)	DPH2 (ENSCHIG00000000512)	ATP6V0B (ENSCHIG00000017292)	B4GALT2 (ENSCHIG00000008852)	CCDC24 (ENSCHIG00000019944)	ENSCHIG00000026700	ENSCHIG00000016150	KLF17 (ENSCHIG00000006866)	DMAP1 (ENSCHIG00000022071)	ENSCHIG00000027211	ERI3 (ENSCHIG00000024241)	ENSCHIG00000016127	ENSCHIG00000007125 #22	ENSCHIG00000019592	TMEM53 (ENSCHIG00000017959)	ENSCHIG00000013485	ARMH1 (ENSCHIG00000021996)	KIF2C (ENSCHIG00000021902)	ENSCHIG00000020368	BEST4 (ENSCHIG00000014606)	PLK3 (ENSCHIG00000000804)	DYNLT4 (ENSCHIG00000009436)	BTBD19 (ENSCHIG00000013544)	PTCH2 (ENSCHIG00000017723)	EIF2B3 (ENSCHIG00000015663)	HECTD3 (ENSCHIG00000025462)	UROD (ENSCHIG00000026792)	ZSWIM5 (ENSCHIG00000026563)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a.fb.a
Bos	ANCESTRAL SPECIES	5	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.b ##32	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Bos_a	ANCESTRAL SPECIES	6												ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Wild yak	MODERN SPECIES	1783																ID2 (ENSBMUG00000003840) #22	KIDINS220 (ENSBMUG00000003783) #24	MBOAT2 (ENSBMUG00000003625) #25	ENSBMUG00000003596	ASAP2 (ENSBMUG00000003572) #37	ITGB1BP1 (ENSBMUG00000003480) #36	CPSF3 (ENSBMUG00000003413) #35	IAH1 (ENSBMUG00000003367) #34	ADAM17 (ENSBMUG00000003344) #33	YWHAQ (ENSBMUG00000003324) #32
Domestic yak	MODERN SPECIES	28												SOX11 (ENSBGRG00000015914) #18	CMPK2 (ENSBGRG00000015652) #19	RSAD2 (ENSBGRG00000015611) #20	RNF144A (ENSBGRG00000015479) #21	ID2 (ENSBGRG00000015396) #22	ENSBGRG00000015325	KIDINS220 (ENSBGRG00000014341) #24	MBOAT2 (ENSBGRG00000014129) #25	ASAP2 (ENSBGRG00000013865) #37	ITGB1BP1 (ENSBGRG00000013746) #36	CPSF3 (ENSBGRG00000013338) #35	IAH1 (ENSBGRG00000013251) #34	ADAM17 (ENSBGRG00000012923) #33	YWHAQ (ENSBGRG00000012872) #32	ENSBGRG00000012819 ##32	ENSBGRG00000012787	TAF1B (ENSBGRG00000012581) #31	GRHL1 (ENSBGRG00000011381) #29	ENSBGRG00000011303	KLF11 (ENSBGRG00000011215) #28
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000010743.b	ENSGT00390000005084	ENSGT00390000013765	ENSGT00940000156868	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990.k #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.b ##32	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A
Cow	MODERN SPECIES	2	RBM18 (ENSBTAG00000016367)	LHX6 (ENSBTAG00000005525)	MORN5 (ENSBTAG00000004296)	NDUFA8 (ENSBTAG00000004295)	ENSBTAG00000012827	DAB2IP (ENSBTAG00000008232)	GGTA1 (ENSBTAG00000012090)	ENSBTAG00000039186	ENSBTAG00000039201	SOX11 (ENSBTAG00000050114) #18	ENSBTAG00000051441	CMPK2 (ENSBTAG00000019979) #19	RSAD2 (ENSBTAG00000016061) #20	RNF144A (ENSBTAG00000044064) #21	ENSBTAG00000037793	ID2 (ENSBTAG00000021187) #22	KIDINS220 (ENSBTAG00000007963) #24	MBOAT2 (ENSBTAG00000008160) #25	ASAP2 (ENSBTAG00000002329) #37	ITGB1BP1 (ENSBTAG00000013063) #36	CPSF3 (ENSBTAG00000019735) #35	IAH1 (ENSBTAG00000001140) #34	ADAM17 (ENSBTAG00000001141) #33	YWHAQ (ENSBTAG00000002108) ##32	ENSBTAG00000048394	TAF1B (ENSBTAG00000007543) #31	GRHL1 (ENSBTAG00000007485) #29	KLF11 (ENSBTAG00000046218) #28	CYS1 (ENSBTAG00000052669) #27	RRM2 (ENSBTAG00000008216) #26	HPCAL1 (ENSBTAG00000004259)
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005003186	PTGS1 (ENSBIXG00005003219)	RBM18 (ENSBIXG00005019751)	LHX6 (ENSBIXG00005019970)	ENSBIXG00005007672	NDUFA8 (ENSBIXG00005003287)	TTLL11 (ENSBIXG00005003298)	DAB2IP (ENSBIXG00005005534)	ENSBIXG00005020351	ENSBIXG00005020391	ENSBIXG00005020418	SOX11 (ENSBIXG00005020448) #18	CMPK2 (ENSBIXG00005003470) #19	RSAD2 (ENSBIXG00005020552) #20	RNF144A (ENSBIXG00005020588) #21	ID2 (ENSBIXG00005020723) #22	KIDINS220 (ENSBIXG00005021201) #24	MBOAT2 (ENSBIXG00005021383) #25	ASAP2 (ENSBIXG00005021521) #37	ITGB1BP1 (ENSBIXG00005021598) #36	CPSF3 (ENSBIXG00005003653) #35	IAH1 (ENSBIXG00005021763) #34	ADAM17 (ENSBIXG00005002613) #33	YWHAQ (ENSBIXG00005021830) #32	ENSBIXG00005021842	TAF1B (ENSBIXG00005021864) #31	GRHL1 (ENSBIXG00005003698) #29	KLF11 (ENSBIXG00005021989) #28	ENSBIXG00005003712 #27	RRM2 (ENSBIXG00005022029) #26	HPCAL1 (ENSBIXG00005006887)
American bison	MODERN SPECIES	3221	MRRF (ENSBBBG00000012462)	RBM18 (ENSBBBG00000012432)	ENSBBBG00000001879	MORN5 (ENSBBBG00000012415)	NDUFA8 (ENSBBBG00000012402)	ENSBBBG00000012397	ENSBBBG00000002359	DAB2IP (ENSBBBG00000012385)	ENSBBBG00000012306	ENSBBBG00000002314	ENSBBBG00000002313	ENSBBBG00000012273	ENSBBBG00000012270	RSAD2 (ENSBBBG00000012264) #20	RNF144A (ENSBBBG00000007447) #21	ID2 (ENSBBBG00000012256) #22	KIDINS220 (ENSBBBG00000012237) #24	ENSBBBG00000012162	MBOAT2 (ENSBBBG00000012157) #25	ASAP2 (ENSBBBG00000012138) #37	ENSBBBG00000012059	ITGB1BP1 (ENSBBBG00000012050) #36	CPSF3 (ENSBBBG00000012019) #35	IAH1 (ENSBBBG00000008101) #34	ADAM17 (ENSBBBG00000002244) #33	YWHAQ (ENSBBBG00000011974) #32	TAF1B (ENSBBBG00000011961) #31	GRHL1 (ENSBBBG00000011949) #29	KLF11 (ENSBBBG00000011923) #28	RRM2 (ENSBBBG00000011911) #26	HPCAL1 (ENSBBBG00000007122)
Siberian musk deer	MODERN SPECIES	238	PTGS1 (ENSMMSG00000003179)	MRRF (ENSMMSG00000003259)	RBM18 (ENSMMSG00000003283)	LHX6 (ENSMMSG00000003304)	MORN5 (ENSMMSG00000003337)	NDUFA8 (ENSMMSG00000003353)	TTLL11 (ENSMMSG00000003370)	DAB2IP (ENSMMSG00000003463)	ENSMMSG00000003726	ENSMMSG00000003739	ENSMMSG00000003765	ENSMMSG00000003776	CMPK2 (ENSMMSG00000003809) #19	RSAD2 (ENSMMSG00000003822) #20	RNF144A (ENSMMSG00000003832) #21	ID2 (ENSMMSG00000003856) #22	KIDINS220 (ENSMMSG00000003882) #24	MBOAT2 (ENSMMSG00000003927) #25	ASAP2 (ENSMMSG00000000274) #37	ENSMMSG00000000578 #36	CPSF3 (ENSMMSG00000000621) #35	ENSMMSG00000000723 #34	ADAM17 (ENSMMSG00000000759) #33	YWHAQ (ENSMMSG00000000770) #32	TAF1B (ENSMMSG00000000824) #31	GRHL1 (ENSMMSG00000000910) #29	KLF11 (ENSMMSG00000001004) #28	CYS1 (ENSMMSG00000001021) #27	ENSMMSG00000001037 #26	HPCAL1 (ENSMMSG00000001078)	ENSMMSG00000001108
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	1323	SLC25A43 (ENSCHYG00000012551)	SLC25A5 (ENSCHYG00000012593)	STEEP1 (ENSCHYG00000012674)	UBE2A (ENSCHYG00000012792)	NKRF (ENSCHYG00000012910)	SEPTIN6 (ENSCHYG00000012968)	SOWAHD (ENSCHYG00000013226)	ENSCHYG00000013248	ENSCHYG00000013306	UPF3B (ENSCHYG00000013449)	ENSCHYG00000013587	ENSCHYG00000013639	ENSCHYG00000013684	NKAP (ENSCHYG00000013797)	ENSCHYG00000013948	ENSCHYG00000014030 #22	ENSCHYG00000014045	ZBTB33 (ENSCHYG00000014073)	TMEM255A (ENSCHYG00000014120)	ATP1B4 (ENSCHYG00000014471)	ENSCHYG00000014546	LAMP2 (ENSCHYG00000014639)	CUL4B (ENSCHYG00000014824)	MCTS1 (ENSCHYG00000015357)	ENSCHYG00000015647	ENSCHYG00000015665	GRIA3 (ENSCHYG00000015734)	ENSCHYG00000016068	ENSCHYG00000016724	XIAP (ENSCHYG00000016805)	STAG2 (ENSCHYG00000016931)
Yarkand deer	MODERN SPECIES	2	PTGS1 (ENSCHYG00000017893)	ENSCHYG00000017724	MRRF (ENSCHYG00000017424)	ENSCHYG00000017363	LHX6 (ENSCHYG00000017135)	MORN5 (ENSCHYG00000017039)	NDUFA8 (ENSCHYG00000016988)	ENSCHYG00000016926	DAB2IP (ENSCHYG00000016211)	ENSCHYG00000016003	ENSCHYG00000015664	ENSCHYG00000015614	CMPK2 (ENSCHYG00000015445) #19	RSAD2 (ENSCHYG00000015364) #20	RNF144A (ENSCHYG00000015190) #21	ID2 (ENSCHYG00000015082) #22	KIDINS220 (ENSCHYG00000013747) #24	MBOAT2 (ENSCHYG00000013496) #25	ENSCHYG00000013479	ASAP2 (ENSCHYG00000012499) #37	ENSCHYG00000012310 #36	CPSF3 (ENSCHYG00000012112) #35	IAH1 (ENSCHYG00000012019) #34	ADAM17 (ENSCHYG00000011771) #33	YWHAQ (ENSCHYG00000011701) #32	ENSCHYG00000011680	TAF1B (ENSCHYG00000011467) #31	GRHL1 (ENSCHYG00000011321) #29	KLF11 (ENSCHYG00000011297) #28	ENSCHYG00000011258 #26	ENSCHYG00000011216
Suina	ANCESTRAL SPECIES	13	ENSGT00390000015191	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Chacoan peccary	MODERN SPECIES	775				MYT1L (ENSCWAG00000006348)	EIPR1 (ENSCWAG00000009008) #7	TRAPPC12 (ENSCWAG00000009065) #8	ADI1 (ENSCWAG00000009097) #9	RNASEH1 (ENSCWAG00000009165) #10	RPS7 (ENSCWAG00000009286)	COLEC11 (ENSCWAG00000009361) #11	DCDC2C (ENSCWAG00000009777) #15	SOX11 (ENSCWAG00000009865) #18	CMPK2 (ENSCWAG00000009912) #19	RSAD2 (ENSCWAG00000009959) #20	RNF144A (ENSCWAG00000010020) #21	ID2 (ENSCWAG00000010057) #22	KIDINS220 (ENSCWAG00000010112) #24	MBOAT2 (ENSCWAG00000010541) #25	ASAP2 (ENSCWAG00000010606) #37	ITGB1BP1 (ENSCWAG00000010974) #36	CPSF3 (ENSCWAG00000011057) #35	IAH1 (ENSCWAG00000011129) #34	ADAM17 (ENSCWAG00000011306) #33	YWHAQ (ENSCWAG00000011406) #32	TAF1B (ENSCWAG00000011471) #31	GRHL1 (ENSCWAG00000011623) #29	KLF11 (ENSCWAG00000011855) #28	CYS1 (ENSCWAG00000012002) #27	RRM2 (ENSCWAG00000012081) #26	HPCAL1 (ENSCWAG00000012123)	ODC1 (ENSCWAG00000012155)
Pig	MODERN SPECIES	11	TPO (ENSSSCG00000033193)	PXDN (ENSSSCG00000029570)	MYT1L (ENSSSCG00000029334)	EIPR1 (ENSSSCG00000028755) #7	TRAPPC12 (ENSSSCG00000024665) #8	ADI1 (ENSSSCG00000029161) #9	RNASEH1 (ENSSSCG00000025305) #10	ENSSSCG00000031088	COLEC11 (ENSSSCG00000025629) #11	DCDC2C (ENSSSCG00000008651) #15	SOX11 (ENSSSCG00000008649) #18	ENSSSCG00000047407	CMPK2 (ENSSSCG00000008647) #19	RSAD2 (ENSSSCG00000008648) #20	RNF144A (ENSSSCG00000008646) #21	ID2 (ENSSSCG00000008645) #22	KIDINS220 (ENSSSCG00000008644) #24	MBOAT2 (ENSSSCG00000023539) #25	ASAP2 (ENSSSCG00000008642) #37	ITGB1BP1 (ENSSSCG00000029313) #36	CPSF3 (ENSSSCG00000020799) #35	IAH1 (ENSSSCG00000008640) #34	ADAM17 (ENSSSCG00000008641) #33	YWHAQ (ENSSSCG00000008638) ##32	TAF1B (ENSSSCG00000008637) #31	GRHL1 (ENSSSCG00000026068) #29	KLF11 (ENSSSCG00000038643) #28	CYS1 (ENSSSCG00000040267) #27	ENSSSCG00000031741 #26	HPCAL1 (ENSSSCG00000003663)	ODC1 (ENSSSCG00000027121)
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Equus	ANCESTRAL SPECIES	7	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Horse	MODERN SPECIES	6	PXDN (ENSECAG00000019739)	MYT1L (ENSECAG00000014657)	EIPR1 (ENSECAG00000011270) #7	TRAPPC12 (ENSECAG00000005827) #8	ADI1 (ENSECAG00000054744) #9	RNASEH1 (ENSECAG00000020695) #10	RPS7 (ENSECAG00000020253)	COLEC11 (ENSECAG00000017488) #11	ALLC (ENSECAG00000014068) #12	ENSECAG00000013638 #15	ENSECAG00000053393	SOX11 (ENSECAG00000037831) #18	CMPK2 (ENSECAG00000012773) #19	RSAD2 (ENSECAG00000010055) #20	RNF144A (ENSECAG00000009610) #21	ID2 (ENSECAG00000008738) #22	KIDINS220 (ENSECAG00000019263) #24	MBOAT2 (ENSECAG00000015922) #25	ENSECAG00000054846	ASAP2 (ENSECAG00000024278) #37	ITGB1BP1 (ENSECAG00000024193) #36	CPSF3 (ENSECAG00000019911) #35	IAH1 (ENSECAG00000018250) #34	ADAM17 (ENSECAG00000005760) #33	ENSECAG00000050309	YWHAQ (ENSECAG00000004925) ##32	TAF1B (ENSECAG00000023244) #31	GRHL1 (ENSECAG00000015969) #29	KLF11 (ENSECAG00000015820) #28	CYS1 (ENSECAG00000039359) #27	RRM2 (ENSECAG00000007464) #26
Donkey	MODERN SPECIES	26	TPO (ENSEASG00005022031)	PXDN (ENSEASG00005022055)	MYT1L (ENSEASG00005022125)	EIPR1 (ENSEASG00005022177) #7	TRAPPC12 (ENSEASG00005022184) #8	ADI1 (ENSEASG00005022195) #9	RNASEH1 (ENSEASG00005022200) #10	RPS7 (ENSEASG00005022205)	COLEC11 (ENSEASG00005037869) #11	ALLC (ENSEASG00005022214) #12	ENSEASG00005022219 #15	ENSEASG00005035871 #18	CMPK2 (ENSEASG00005022223) #19	RSAD2 (ENSEASG00005022224) #20	RNF144A (ENSEASG00005022228) #21	ID2 (ENSEASG00005000025) #22	KIDINS220 (ENSEASG00005000060) #24	MBOAT2 (ENSEASG00005000101) #25	ASAP2 (ENSEASG00005000562) #37	ITGB1BP1 (ENSEASG00005003969) #36	CPSF3 (ENSEASG00005003970) #35	ENSEASG00005026278 #34	ADAM17 (ENSEASG00005004001) #33	YWHAQ (ENSEASG00005004792) #32	TAF1B (ENSEASG00005004803) #31	GRHL1 (ENSEASG00005028173) #29	KLF11 (ENSEASG00005004881) #28	CYS1 (ENSEASG00005025190) #27	RRM2 (ENSEASG00005004892) #26	HPCAL1 (ENSEASG00005004903)	ENSEASG00005004910
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Megabat	MODERN SPECIES	71																ID2 (ENSPVAG00000003912) #22	KIDINS220 (ENSPVAG00000003915) #24
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1720																ENSMLUG00000008563 #22	KIDINS220 (ENSMLUG00000008524) #24	MBOAT2 (ENSMLUG00000003545) #25	ENSMLUG00000030148
Microbat	MODERN SPECIES	873																ENSMLUG00000012800 #22
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	4	PXDN (ENSRFEG00010014968)	MYT1L (ENSRFEG00010011246)	EIPR1 (ENSRFEG00010011067) #7	TRAPPC12 (ENSRFEG00010011041) #8	ADI1 (ENSRFEG00010010993) #9	RNASEH1 (ENSRFEG00010010966) #10	RPS7 (ENSRFEG00010010903)	COLEC11 (ENSRFEG00010010705) #11	ALLC (ENSRFEG00010010543) #12	DCDC2C (ENSRFEG00010010389) #15	SOX11 (ENSRFEG00010010241) #18	ENSRFEG00010010195	CMPK2 (ENSRFEG00010010183) #19	RSAD2 (ENSRFEG00010010140) #20	RNF144A (ENSRFEG00010010097) #21	ENSRFEG00010010062 #22	KIDINS220 (ENSRFEG00010009917) #24	MBOAT2 (ENSRFEG00010009854) #25	ENSRFEG00010009833	ENSRFEG00010009824	ASAP2 (ENSRFEG00010009716) #37	ITGB1BP1 (ENSRFEG00010009640) #36	CPSF3 (ENSRFEG00010009573) #35	IAH1 (ENSRFEG00010009506) #34	ADAM17 (ENSRFEG00010009462) #33	YWHAQ (ENSRFEG00010009419) #32	TAF1B (ENSRFEG00010009242) #31	ENSRFEG00010009191	GRHL1 (ENSRFEG00010008922) #29	KLF11 (ENSRFEG00010008867) #28	CYS1 (ENSRFEG00010008838) #27
Greater horseshoe bat	MODERN SPECIES	16	PCDHB16 (ENSRFEG00010006048)	ENSRFEG00010006071	ENSRFEG00010006092	ENSRFEG00010006117	PCDHB15 (ENSRFEG00010006143)	ENSRFEG00010006171	SLC25A2 (ENSRFEG00010006191)	TAF7 (ENSRFEG00010006204)	PCDHGC3 (ENSRFEG00010006307)	ENSRFEG00010006496	DIAPH1 (ENSRFEG00010006574)	ENSRFEG00010006781	RELL2 (ENSRFEG00010006841)	FCHSD1 (ENSRFEG00010006953)	ARAP3 (ENSRFEG00010007170)	ENSRFEG00010007296 #22	PCDH1 (ENSRFEG00010007326)	DELE1 (ENSRFEG00010007416)	PCDH12 (ENSRFEG00010007543)	RNF14 (ENSRFEG00010007576)	GNPDA1 (ENSRFEG00010007628)	NDFIP1 (ENSRFEG00010007668)	SPRY4 (ENSRFEG00010007705)	FGF1 (ENSRFEG00010007768)	ARHGAP26 (ENSRFEG00010007845)	NR3C1 (ENSRFEG00010008132)	HMHB1 (ENSRFEG00010008275)	YIPF5 (ENSRFEG00010008320)	ENSRFEG00010008367	KCTD16 (ENSRFEG00010008389)	PRELID2 (ENSRFEG00010008426)
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Canidae	ANCESTRAL SPECIES	46	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.j.f.a	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Dog	MODERN SPECIES	8	TPO (ENSCAFG00845017327)	PXDN (ENSCAFG00845017525)	MYT1L (ENSCAFG00845018747)	EIPR1 (ENSCAFG00845021194) #7	TRAPPC12 (ENSCAFG00845021304) #8	ADI1 (ENSCAFG00845021388) #9	RNASEH1 (ENSCAFG00845021474) #10	RPS7 (ENSCAFG00845021596)	COLEC11 (ENSCAFG00845021783) #11	ALLC (ENSCAFG00845021988) #12	DCDC2C (ENSCAFG00845022069) #15	SOX11 (ENSCAFG00845022195) #18	CMPK2 (ENSCAFG00845022277) #19	RSAD2 (ENSCAFG00845022316) #20	RNF144A (ENSCAFG00845022407) #21	ID2 (ENSCAFG00845022749) #22	KIDINS220 (ENSCAFG00845023013) #24	MBOAT2 (ENSCAFG00845023611) #25	ASAP2 (ENSCAFG00845023702) #37	ITGB1BP1 (ENSCAFG00845024064) #36	CPSF3 (ENSCAFG00845024218) #35	IAH1 (ENSCAFG00845024429) #34	ADAM17 (ENSCAFG00845024728) #33	YWHAQ (ENSCAFG00845025457) #32	TAF1B (ENSCAFG00845025510) #31	GRHL1 (ENSCAFG00845025614) #29	KLF11 (ENSCAFG00845025845) #28	CYS1 (ENSCAFG00845025907) #27	RRM2 (ENSCAFG00845025952) #26	HPCAL1 (ENSCAFG00845026130)	ODC1 (ENSCAFG00845026175)
Dingo	MODERN SPECIES	223	SNTG2 (ENSCAFG00020005251)	TPO (ENSCAFG00020005233)	PXDN (ENSCAFG00020005211)	MYT1L (ENSCAFG00020005084)	EIPR1 (ENSCAFG00020005053) #7	TRAPPC12 (ENSCAFG00020005019) #8	ADI1 (ENSCAFG00020005017) #9	RNASEH1 (ENSCAFG00020004994) #10	COLEC11 (ENSCAFG00020004967) #11	ALLC (ENSCAFG00020004959) #12	DCDC2C (ENSCAFG00020004927) #15	SOX11 (ENSCAFG00020004918) #18	ENSCAFG00020004906	RSAD2 (ENSCAFG00020004883) #20	RNF144A (ENSCAFG00020004868) #21	ID2 (ENSCAFG00020004823) #22	KIDINS220 (ENSCAFG00020002173) #24	MBOAT2 (ENSCAFG00020001936) #25	ASAP2 (ENSCAFG00020000377) #37	ITGB1BP1 (ENSCAFG00020000149) #36	CPSF3 (ENSCAFG00020026799) #35	IAH1 (ENSCAFG00020026797) #34	ENSCAFG00020026796 #33	YWHAQ (ENSCAFG00020026795) #32	TAF1B (ENSCAFG00020026787) #31	GRHL1 (ENSCAFG00020026767) #29	KLF11 (ENSCAFG00020026763) #28	CYS1 (ENSCAFG00020026758) #27	RRM2 (ENSCAFG00020026744) #26	HPCAL1 (ENSCAFG00020026737)	ODC1 (ENSCAFG00020026728)
Red fox	MODERN SPECIES	76	TPO (ENSVVUG00000008985)	PXDN (ENSVVUG00000008766)	ENSVVUG00000008727	EIPR1 (ENSVVUG00000008674) #7	TRAPPC12 (ENSVVUG00000008654) #8	ADI1 (ENSVVUG00000008646) #9	RNASEH1 (ENSVVUG00000008633) #10	RPS7 (ENSVVUG00000008628)	COLEC11 (ENSVVUG00000008618) #11	ALLC (ENSVVUG00000008603) #12	ENSVVUG00000008582 #15	ENSVVUG00000008555	ENSVVUG00000008545	RSAD2 (ENSVVUG00000008530) #20	RNF144A (ENSVVUG00000008507) #21	ID2 (ENSVVUG00000008464) #22	KIDINS220 (ENSVVUG00000003457) #24	MBOAT2 (ENSVVUG00000002534) #25	ASAP2 (ENSVVUG00000002403) #37	ITGB1BP1 (ENSVVUG00000002216) #36	CPSF3 (ENSVVUG00000002194) #35	IAH1 (ENSVVUG00000002169) #34	ADAM17 (ENSVVUG00000002136) #33	YWHAQ (ENSVVUG00000002125) #32	TAF1B (ENSVVUG00000001641) #31	GRHL1 (ENSVVUG00000001610) #29	KLF11 (ENSVVUG00000001585) #28	RRM2 (ENSVVUG00000001484) #26	HPCAL1 (ENSVVUG00000001457)	ODC1 (ENSVVUG00000001437)	ENSVVUG00000001420
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000012138.a.a.j.s	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Ursus	ANCESTRAL SPECIES	125	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000012138.a.a.j.s.a	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Polar bear	MODERN SPECIES	89	SNTG2 (ENSUMAG00000004445)	ENSUMAG00000004436	PXDN (ENSUMAG00000004298)	MYT1L (ENSUMAG00000004239)	EIPR1 (ENSUMAG00000004220) #7	TRAPPC12 (ENSUMAG00000003998) #8	RNASEH1 (ENSUMAG00000003941) #10	RPS7 (ENSUMAG00000003937)	COLEC11 (ENSUMAG00000003933) #11	ALLC (ENSUMAG00000003926) #12	ENSUMAG00000003916	ENSUMAG00000003909	ENSUMAG00000003902	RSAD2 (ENSUMAG00000003893) #20	RNF144A (ENSUMAG00000003876) #21	ID2 (ENSUMAG00000003840) #22	KIDINS220 (ENSUMAG00000003833) #24	MBOAT2 (ENSUMAG00000003744) #25	ENSUMAG00000003713	ASAP2 (ENSUMAG00000003695) #37	ITGB1BP1 (ENSUMAG00000003689) #36	CPSF3 (ENSUMAG00000003676) #35	ENSUMAG00000003666 #34	ENSUMAG00000003662 #34	ADAM17 (ENSUMAG00000003653) #33	YWHAQ (ENSUMAG00000003646) #32	TAF1B (ENSUMAG00000003559) #31	GRHL1 (ENSUMAG00000003494) #29	KLF11 (ENSUMAG00000003481) #28	RRM2 (ENSUMAG00000003431) #26	HPCAL1 (ENSUMAG00000003415)
American black bear	MODERN SPECIES	6181																ID2 (ENSUAMG00000002504) #22
Giant Panda	MODERN SPECIES	14	SNTG2 (ENSAMEG00000009568)	TPO (ENSAMEG00000014666)	PXDN (ENSAMEG00000014718)	MYT1L (ENSAMEG00000014764)	EIPR1 (ENSAMEG00000014845) #7	TRAPPC12 (ENSAMEG00000018428) #8	ADI1 (ENSAMEG00000018432) #9	RNASEH1 (ENSAMEG00000018433) #10	RPS7 (ENSAMEG00000018435)	ALLC (ENSAMEG00000018438) #12	ENSAMEG00000026778 #15	SOX11 (ENSAMEG00000013354) #18	CMPK2 (ENSAMEG00000013345) #19	RSAD2 (ENSAMEG00000013333) #20	RNF144A (ENSAMEG00000013324) #21	ID2 (ENSAMEG00000026711) #22	KIDINS220 (ENSAMEG00000008328) #24	MBOAT2 (ENSAMEG00000008373) #25	ENSAMEG00000024246	ASAP2 (ENSAMEG00000008406) #37	ITGB1BP1 (ENSAMEG00000008478) #36	CPSF3 (ENSAMEG00000008493) #35	IAH1 (ENSAMEG00000008545) #34	ADAM17 (ENSAMEG00000008569) #33	YWHAQ (ENSAMEG00000008618) #32	TAF1B (ENSAMEG00000011301) #31	GRHL1 (ENSAMEG00000011320) #29	KLF11 (ENSAMEG00000011355) #28	RRM2 (ENSAMEG00000011372) #26	HPCAL1 (ENSAMEG00000029791)	ODC1 (ENSAMEG00000011415)
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00990000204082	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Ferret	MODERN SPECIES	178	RNASEH1 (ENSMPUG00000012984) #10	ENSMPUG00000013003	COLEC11 (ENSMPUG00000013013) #11	ALLC (ENSMPUG00000013055) #12	DCDC2C (ENSMPUG00000013104) #15	ENSMPUG00000013120	ENSMPUG00000019478	ENSMPUG00000013122	ENSMPUG00000013127	ENSMPUG00000019479	CMPK2 (ENSMPUG00000013134) #19	RSAD2 (ENSMPUG00000013146) #20	RNF144A (ENSMPUG00000013154) #21	ENSMPUG00000013172	ENSMPUG00000013173	ID2 (ENSMPUG00000013178) #22	KIDINS220 (ENSMPUG00000013181) #24	MBOAT2 (ENSMPUG00000013191) #25	ASAP2 (ENSMPUG00000013197) #37	ITGB1BP1 (ENSMPUG00000013210) #36	CPSF3 (ENSMPUG00000013213) #35	IAH1 (ENSMPUG00000013218) #34	ADAM17 (ENSMPUG00000013236) #33	ENSMPUG00000013249	YWHAQ (ENSMPUG00000013252) #32	TAF1B (ENSMPUG00000013256) #31	GRHL1 (ENSMPUG00000013263) #29	ENSMPUG00000013277	ENSMPUG00000013281	KLF11 (ENSMPUG00000013287) #28	RRM2 (ENSMPUG00000013295) #26
American mink	MODERN SPECIES	7	ENSNVIG00000017354	PXDN (ENSNVIG00000016909)	MYT1L (ENSNVIG00000016023)	EIPR1 (ENSNVIG00000015985) #7	TRAPPC12 (ENSNVIG00000015971) #8	ADI1 (ENSNVIG00000015966) #9	RNASEH1 (ENSNVIG00000015913) #10	ENSNVIG00000015884	COLEC11 (ENSNVIG00000015826) #11	ALLC (ENSNVIG00000015809) #12	DCDC2C (ENSNVIG00000015778) #15	SOX11 (ENSNVIG00000015756) #18	ENSNVIG00000015750	RSAD2 (ENSNVIG00000015718) #20	R144A (ENSNVIG00000015685) #21	ID2 (ENSNVIG00000015663) #22	KIDINS220 (ENSNVIG00000015535) #24	MBOAT2 (ENSNVIG00000015525) #25	ASAP2 (ENSNVIG00000015416) #37	ITGB1BP1 (ENSNVIG00000015345) #36	CPSF3 (ENSNVIG00000015301) #35	IAH1 (ENSNVIG00000015262) #34	ADAM17 (ENSNVIG00000015197) #33	YWHAQ (ENSNVIG00000015162) #32	TAF1B (ENSNVIG00000015127) #31	GRHL1 (ENSNVIG00000015046) #29	KLF11 (ENSNVIG00000015016) #28	RRM2 (ENSNVIG00000014985) #26	ENSNVIG00000014964	DCOR (ENSNVIG00000014941)	NOL10 (ENSNVIG00000014778)
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Cat	MODERN SPECIES	2	TPO (ENSFCAG00000002875)	PXDN (ENSFCAG00000008327)	MYT1L (ENSFCAG00000045313)	EIPR1 (ENSFCAG00000008983) #7	TRAPPC12 (ENSFCAG00000024779) #8	ADI1 (ENSFCAG00000025763) #9	RNASEH1 (ENSFCAG00000025832) #10	RPS7 (ENSFCAG00000023243)	COLEC11 (ENSFCAG00000031800) #11	ALLC (ENSFCAG00000007504) #12	DCDC2C (ENSFCAG00000044946) #15	SOX11 (ENSFCAG00000039092) #18	CMPK2 (ENSFCAG00000022513) #19	RSAD2 (ENSFCAG00000035139) #20	RNF144A (ENSFCAG00000000709) #21	ID2 (ENSFCAG00000026937) #22	KIDINS220 (ENSFCAG00000029422) #24	MBOAT2 (ENSFCAG00000027684) #25	ASAP2 (ENSFCAG00000007850) #37	ITGB1BP1 (ENSFCAG00000034320) #36	CPSF3 (ENSFCAG00000007852) #35	IAH1 (ENSFCAG00000023291) #34	ADAM17 (ENSFCAG00000007853) #33	YWHAQ (ENSFCAG00000007854) ##32	TAF1B (ENSFCAG00000007855) #31	GRHL1 (ENSFCAG00000007856) #29	KLF11 (ENSFCAG00000030965) #28	CYS1 (ENSFCAG00000045113) #27	RRM2 (ENSFCAG00000003942) #26	HPCAL1 (ENSFCAG00000009252)	ODC1 (ENSFCAG00000027500)
Panthera	ANCESTRAL SPECIES	2	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Tiger	MODERN SPECIES	581						EIPR1 (ENSPTIG00000018777) #7	ENSPTIG00000018854 #8	ADI1 (ENSPTIG00000019002) #9	RNASEH1 (ENSPTIG00000019034) #10	RPS7 (ENSPTIG00000019474)	ALLC (ENSPTIG00000019525) #12	DCDC2C (ENSPTIG00000019551) #15	ENSPTIG00000019591	RSAD2 (ENSPTIG00000019625) #20	RNF144A (ENSPTIG00000019714) #21	ID2 (ENSPTIG00000019724) #22	KIDINS220 (ENSPTIG00000019843) #24	MBOAT2 (ENSPTIG00000020033) #25	ASAP2 (ENSPTIG00000000985) #37	ITGB1BP1 (ENSPTIG00000002156) #36	CPSF3 (ENSPTIG00000003920) #35	IAH1 (ENSPTIG00000005299) #34	ADAM17 (ENSPTIG00000005404) #33	YWHAQ (ENSPTIG00000006178) #32	TAF1B (ENSPTIG00000006228) #31	GRHL1 (ENSPTIG00000007003) #29	KLF11 (ENSPTIG00000007061) #28	RRM2 (ENSPTIG00000007390) #26	ODC1 (ENSPTIG00000007491)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000016845 #27	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
lion	MODERN SPECIES	3	TMEM18 (ENSPLOG00000000784)	SNTG2 (ENSPLOG00000000838)	TPO (ENSPLOG00000000892)	PXDN (ENSPLOG00000000940)	MYT1L (ENSPLOG00000001290)	EIPR1 (ENSPLOG00000001791) #7	ENSPLOG00000001824 #7	TRAPPC12 (ENSPLOG00000001834) #8	RNASEH1 (ENSPLOG00000001905) #10	RPS7 (ENSPLOG00000001995)	COLEC11 (ENSPLOG00000002030) #11	ALLC (ENSPLOG00000002071) #12	CMPK2 (ENSPLOG00000002115) #19	RSAD2 (ENSPLOG00000002128) #20	RNF144A (ENSPLOG00000002146) #21	ID2 (ENSPLOG00000002192) #22	KIDINS220 (ENSPLOG00000002235) #24	MBOAT2 (ENSPLOG00000002421) #25	ASAP2 (ENSPLOG00000002531) #37	ITGB1BP1 (ENSPLOG00000002692) #36	CPSF3 (ENSPLOG00000002732) #35	IAH1 (ENSPLOG00000002790) #34	ADAM17 (ENSPLOG00000002823) #33	YWHAQ (ENSPLOG00000002873) #32	ENSPLOG00000002895	TAF1B (ENSPLOG00000002921) #31	GRHL1 (ENSPLOG00000002984) #29	KLF11 (ENSPLOG00000003042) #28	CYS1 (ENSPLOG00000003056) #27	RRM2 (ENSPLOG00000003069) #26	HPCAL1 (ENSPLOG00000003090)
leopard	DUPLICATION
leopard	MODERN SPECIES						EIPR1 (ENSPPRG00000015372) #7	ENSPPRG00000015440 #8	ADI1 (ENSPPRG00000015485) #9	RNASEH1 (ENSPPRG00000015513) #10	RPS7 (ENSPPRG00000015564)	COLEC11 (ENSPPRG00000015594) #11	ALLC (ENSPPRG00000015621) #12	DCDC2C (ENSPPRG00000015663) #15	CMPK2 (ENSPPRG00000015716) #19	RSAD2 (ENSPPRG00000015738) #20	RNF144A (ENSPPRG00000015759) #21	ENSPPRG00000015776 #22	ID2 (ENSPPRG00000015804) #22	KIDINS220 (ENSPPRG00000016171) #24	MBOAT2 (ENSPPRG00000016261) #25	ASAP2 (ENSPPRG00000016539) #37	ITGB1BP1 (ENSPPRG00000016726) #36	CPSF3 (ENSPPRG00000016790) #35	IAH1 (ENSPPRG00000016876) #34	ADAM17 (ENSPPRG00000016991) #33	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #32	TAF1B (ENSPPRG00000017125) #31	GRHL1 (ENSPPRG00000017279) #29	KLF11 (ENSPPRG00000017354) #28	RRM2 (ENSPPRG00000017387) #26	ENSPPRG00000017433
leopard	MODERN SPECIES					EIPR1 (ENSPPRG00000015372) #7	ENSPPRG00000015440 #8	ADI1 (ENSPPRG00000015485) #9	RNASEH1 (ENSPPRG00000015513) #10	RPS7 (ENSPPRG00000015564)	COLEC11 (ENSPPRG00000015594) #11	ALLC (ENSPPRG00000015621) #12	DCDC2C (ENSPPRG00000015663) #15	CMPK2 (ENSPPRG00000015716) #19	RSAD2 (ENSPPRG00000015738) #20	RNF144A (ENSPPRG00000015759) #21	ENSPPRG00000015776 #22	ID2 (ENSPPRG00000015804) #22	KIDINS220 (ENSPPRG00000016171) #24	MBOAT2 (ENSPPRG00000016261) #25	ASAP2 (ENSPPRG00000016539) #37	ITGB1BP1 (ENSPPRG00000016726) #36	CPSF3 (ENSPPRG00000016790) #35	IAH1 (ENSPPRG00000016876) #34	ADAM17 (ENSPPRG00000016991) #33	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #32	TAF1B (ENSPPRG00000017125) #31	GRHL1 (ENSPPRG00000017279) #29	KLF11 (ENSPPRG00000017354) #28	RRM2 (ENSPPRG00000017387) #26	ENSPPRG00000017433	HPCAL1 (ENSPPRG00000017486)
Eulipotyphla	ANCESTRAL SPECIES	583																ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25
Hedgehog	MODERN SPECIES	11693																ID2 (ENSEEUG00000007814) #22
Common shrew	MODERN SPECIES	1210																ID2 (ENSSARG00000003385) #22	KIDINS220 (ENSSARG00000003395) #24	MBOAT2 (ENSSARG00000003492) #25
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Xenarthra	ANCESTRAL SPECIES	395																ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28
Sloth	MODERN SPECIES	12321																ID2 (ENSCHOG00000003078) #22
Armadillo	MODERN SPECIES	1449															ENSDNOG00000042784	ID2 (ENSDNOG00000035918) #22	KIDINS220 (ENSDNOG00000002905) #24	MBOAT2 (ENSDNOG00000041557) #25	ENSDNOG00000041786	ASAP2 (ENSDNOG00000008886) #37	ITGB1BP1 (ENSDNOG00000008930) #36	CPSF3 (ENSDNOG00000008940) #35	IAH1 (ENSDNOG00000009272) #34	ADAM17 (ENSDNOG00000009284) #33	ENSDNOG00000033666	TAF1B (ENSDNOG00000018268) #31	GRHL1 (ENSDNOG00000014493) #29	KLF11 (ENSDNOG00000035689) #28	ENSDNOG00000047738	ENSDNOG00000012581
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Tenrec	MODERN SPECIES	17020																ID2 (ENSETEG00000014219) #22
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b.a.a #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Elephant	MODERN SPECIES	197	PXDN (ENSLAFG00000008450)	MYT1L (ENSLAFG00000002751)	EIPR1 (ENSLAFG00000022810) #7	TRAPPC12 (ENSLAFG00000004900) #8	ADI1 (ENSLAFG00000004902) #9	RNASEH1 (ENSLAFG00000015091) #10	RPS7 (ENSLAFG00000015087)	COLEC11 (ENSLAFG00000021841) #11	ALLC (ENSLAFG00000013751) #12	ENSLAFG00000027245	ENSLAFG00000026156	SOX11 (ENSLAFG00000006327) #18	CMPK2 (ENSLAFG00000031856) #19	RSAD2 (ENSLAFG00000017097) #20	RNF144A (ENSLAFG00000001936) #21	ID2 (ENSLAFG00000006910) #22	KIDINS220 (ENSLAFG00000014141) #24	MBOAT2 (ENSLAFG00000008586) #25	ASAP2 (ENSLAFG00000009029) #37	ITGB1BP1 (ENSLAFG00000009036) #36	CPSF3 (ENSLAFG00000009467) #35	IAH1 (ENSLAFG00000009469) #34	ADAM17 (ENSLAFG00000009473) #33	YWHAQ (ENSLAFG00000009482) #32	TAF1B (ENSLAFG00000000782) #31	GRHL1 (ENSLAFG00000009330) #29	KLF11 (ENSLAFG00000032182) #28	ENSLAFG00000026037	RRM2 (ENSLAFG00000003627) #26	HPCAL1 (ENSLAFG00000004069)	ODC1 (ENSLAFG00000005330)
Hyrax	MODERN SPECIES	1341																ID2 (ENSPCAG00000005885) #22	KIDINS220 (ENSPCAG00000005903) #24
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.d #10	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00940000158104	ENSGT00940000157666	ENSGT00390000003466.c #10	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.d #10	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Tasmanian devil	MODERN SPECIES	1	PXDN (ENSSHAG00000016151)	ENSSHAG00000024001 #10	MYT1L (ENSSHAG00000015433)	ENSSHAG00000026621	EIPR1 (ENSSHAG00000014426) #7	TRAPPC12 (ENSSHAG00000013794) #8	ADI1 (ENSSHAG00000031515) #9	ENSSHAG00000030451 #10	RPS7 (ENSSHAG00000026004)	COLEC11 (ENSSHAG00000012488) #11	ALLC (ENSSHAG00000012095) #12	ENSSHAG00000011050 #15	CMPK2 (ENSSHAG00000020558) #19	RSAD2 (ENSSHAG00000028215) #20	RNF144A (ENSSHAG00000007808) #21	ID2 (ENSSHAG00000024722) #22	KIDINS220 (ENSSHAG00000013088) #24	MBOAT2 (ENSSHAG00000012144) #25	ASAP2 (ENSSHAG00000008132) #37	ITGB1BP1 (ENSSHAG00000007675) #36	CPSF3 (ENSSHAG00000007024) #35	IAH1 (ENSSHAG00000006790) #34	ADAM17 (ENSSHAG00000006354) #33	YWHAQ (ENSSHAG00000027258) #32	TAF1B (ENSSHAG00000001155) #31	GRHL1 (ENSSHAG00000002291) #29	ENSSHAG00000005846 #28	ENSSHAG00000026867	ENSSHAG00000009991	CAPN14 (ENSSHAG00000012346)	EHD3 (ENSSHAG00000025583)
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00940000157666	ENSGT00390000003466.c #10	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.d #10	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900	ENSGT00390000004263.b.n
Wallaby	MODERN SPECIES	12603																ID2 (ENSMEUG00000008206) #22
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00940000157666	ENSGT00390000003466.c #10	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466.d #10	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900	ENSGT00390000004263.b.n
Common wonbat	MODERN SPECIES	1073	ENSVURG00010010001	ENSVURG00010010012	EIPR1 (ENSVURG00010010026) #7	TRAPPC12 (ENSVURG00010010042) #8	ADI1 (ENSVURG00010010059) #9	ENSVURG00010010067 #10	RPS7 (ENSVURG00010010088)	ENSVURG00010010129 #12	ENSVURG00010010228	ENSVURG00010010246	ENSVURG00010010257	CMPK2 (ENSVURG00010010275) #19	RSAD2 (ENSVURG00010010282) #20	RNF144A (ENSVURG00010010295) #21	ENSVURG00010010311	ID2 (ENSVURG00010010332) #22	KIDINS220 (ENSVURG00010010355) #24	MBOAT2 (ENSVURG00010010400) #25
koala	MODERN SPECIES	47									SOX11 (ENSPCIG00000033221) #18	ENSPCIG00000001705	CMPK2 (ENSPCIG00000014961) #19	RSAD2 (ENSPCIG00000014960) #20	RNF144A (ENSPCIG00000009611) #21	ENSPCIG00000014602	ENSPCIG00000014608	ID2 (ENSPCIG00000014613) #22	KIDINS220 (ENSPCIG00000014624) #24	MBOAT2 (ENSPCIG00000014636) #25	ASAP2 (ENSPCIG00000014642) #37	ITGB1BP1 (ENSPCIG00000031637) #36	CPSF3 (ENSPCIG00000009823) #35	IAH1 (ENSPCIG00000009821) #34	ADAM17 (ENSPCIG00000009820) #33	YWHAQ (ENSPCIG00000022985) #32	GRHL1 (ENSPCIG00000009811) #29	ENSPCIG00000009814	KLF11 (ENSPCIG00000009805) #28	RRM2 (ENSPCIG00000009801) #26	HPCAL1 (ENSPCIG00000028410)	ODC1 (ENSPCIG00000028406)	NOL10 (ENSPCIG00000022730)
Opossum	MODERN SPECIES		ENSMODG00000046406	EIPR1 (ENSMODG00000014444) #7	TRAPPC12 (ENSMODG00000014478) #8	ADI1 (ENSMODG00000014484) #9	ENSMODG00000014491 #10	RPS7 (ENSMODG00000014495)	ENSMODG00000041774	COLEC11 (ENSMODG00000038328) #11	ALLC (ENSMODG00000014520) #12	ENSMODG00000023196 #15	SOX11 (ENSMODG00000036476) #18	CMPK2 (ENSMODG00000014578) #19	RSAD2 (ENSMODG00000042627) #20	RNF144A (ENSMODG00000014586) #21	ENSMODG00000017695	ID2 (ENSMODG00000014618) #22	ENSMODG00000048947	KIDINS220 (ENSMODG00000014660) #24	MBOAT2 (ENSMODG00000014667) #25	ASAP2 (ENSMODG00000014685) #37	ITGB1BP1 (ENSMODG00000014691) #36	ENSMODG00000038673	CPSF3 (ENSMODG00000014703) #35	IAH1 (ENSMODG00000045560) #34	ADAM17 (ENSMODG00000014726) #33	ENSMODG00000014740 #32	TAF1B (ENSMODG00000014747) #31	GRHL1 (ENSMODG00000014753) #29	KLF11 (ENSMODG00000014758) #28	ENSMODG00000014763 #26	ENSMODG00000040102
Platypus	MODERN SPECIES	84	PXDN (ENSOANG00000009860)	MYT1L (ENSOANG00000009861)	ENSOANG00000042340	EIPR1 (ENSOANG00000014791) #7	ENSOANG00000041529 #8	ADI1 (ENSOANG00000015205) #9	ENSOANG00000050401 #10	RPS7 (ENSOANG00000015206)	COLEC11 (ENSOANG00000044447) #11	ALLC (ENSOANG00000010920) #12	ENSOANG00000043470 #15	SOX11 (ENSOANG00000042349) #18	ENSOANG00000036113 #19	RSAD2 (ENSOANG00000049844) #20	RNF144A (ENSOANG00000051094) #21	ID2 (ENSOANG00000002547) #22	KIDINS220 (ENSOANG00000007570) #24	MBOAT2 (ENSOANG00000007571) #25	ASAP2 (ENSOANG00000004708) #37	ITGB1BP1 (ENSOANG00000006950) #36	CPSF3 (ENSOANG00000008577) #35	ENSOANG00000047163 #34	ADAM17 (ENSOANG00000013331) #33
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
tuatara	MODERN SPECIES	1059											ENSSPUG00000015261	SRSF4 (ENSSPUG00000015318)	MECR (ENSSPUG00000015330)	PTPRU (ENSSPUG00000015342)	ENSSPUG00000015377	ID2 (ENSSPUG00000015382) #22	KIDINS220 (ENSSPUG00000015402) #24	MBOAT2 (ENSSPUG00000015454) #25	ASAP2 (ENSSPUG00000015478) #37	ITGB1BP1 (ENSSPUG00000015506) #36	CPSF3 (ENSSPUG00000015525) #35	IAH1 (ENSSPUG00000015596) #34	ADAM17 (ENSSPUG00000015632) #33	YWHAQ (ENSSPUG00000015663) #32	TAF1B (ENSSPUG00000015685) #31	GRHL1 (ENSSPUG00000015713) #29	KLF11 (ENSSPUG00000015734) #28	HPCAL1 (ENSSPUG00000015772)	ODC1 (ENSSPUG00000015782)	NOL10 (ENSSPUG00000015811)	ENSSPUG00000015855
Episquamata	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Common wall lizard	MODERN SPECIES	11	MYT1L (ENSPMRG00000011107)	EIPR1 (ENSPMRG00000011478) #7	TRAPPC12 (ENSPMRG00000011497) #8	ADI1 (ENSPMRG00000011510) #9	RNASEH1 (ENSPMRG00000011518) #10	RPS7 (ENSPMRG00000011523)	COLEC11 (ENSPMRG00000011530) #11	ALLC (ENSPMRG00000011540) #12	ENSPMRG00000011567 #15	ENSPMRG00000011572	ENSPMRG00000011574	SOX11 (ENSPMRG00000011579) #18	CMPK2 (ENSPMRG00000011581) #19	RSAD2 (ENSPMRG00000011584) #20	RNF144A (ENSPMRG00000011590) #21	ID2 (ENSPMRG00000011594) #22	KIDINS220 (ENSPMRG00000011602) #24	MBOAT2 (ENSPMRG00000011615) #25	ASAP2 (ENSPMRG00000011623) #37	ITGB1BP1 (ENSPMRG00000011647) #36	CPSF3 (ENSPMRG00000011656) #35	IAH1 (ENSPMRG00000011668) #34	ADAM17 (ENSPMRG00000011682) #33	ENSPMRG00000011696 #32	ENSPMRG00000011699	TAF1B (ENSPMRG00000011702) #31	GRHL1 (ENSPMRG00000011712) #29	KLF11 (ENSPMRG00000011727) #28	RRM2 (ENSPMRG00000011731) #26	NOL10 (ENSPMRG00000011740)	HPCAL1 (ENSPMRG00000011758)
Argentine black and white tegu	MODERN SPECIES	9	ADI1 (ENSSMRG00000006539) #9	RNASEH1 (ENSSMRG00000006529) #10	RPS7 (ENSSMRG00000006525)	COLEC11 (ENSSMRG00000006522) #11	ALLC (ENSSMRG00000006519) #12	DCDC2C (ENSSMRG00000006515) #15	SOX11 (ENSSMRG00000006504) #18	ENSSMRG00000006493	ENSSMRG00000006489	ENSSMRG00000006484	ENSSMRG00000006470	CMPK2 (ENSSMRG00000006467) #19	RSAD2 (ENSSMRG00000006397) #20	RNF144A (ENSSMRG00000006394) #21	ENSSMRG00000006368	ID2 (ENSSMRG00000006348) #22	KIDINS220 (ENSSMRG00000006306) #24	MBOAT2 (ENSSMRG00000006296) #25	ASAP2 (ENSSMRG00000006275) #37	ITGB1BP1 (ENSSMRG00000006271) #36	CPSF3 (ENSSMRG00000006269) #35	IAH1 (ENSSMRG00000006268) #34	ADAM17 (ENSSMRG00000006231) #33	YWHAQ (ENSSMRG00000006227) #32	TAF1B (ENSSMRG00000006214) #31	ENSSMRG00000006208 #29	ENSSMRG00000006187 #29	KLF11 (ENSSMRG00000006180) #28	RRM2 (ENSSMRG00000006152) #26	HPCAL1 (ENSSMRG00000006133)	ODC1 (ENSSMRG00000006061)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Lizard	MODERN SPECIES		ENSACAG00000008814	ENSACAG00000001664	CILK1 (ENSACAG00000008662)	FBXO9 (ENSACAG00000008576)	ENSACAG00000039436	ELOVL5 (ENSACAG00000008501)	GCLC (ENSACAG00000008412)	KLHL31 (ENSACAG00000008404)	ENSACAG00000036656	ENSACAG00000035511	CMPK2 (ENSACAG00000007078) #19	RSAD2 (ENSACAG00000039042) #20	RNF144A (ENSACAG00000007048) #21	ENSACAG00000039383	ENSACAG00000040261	ID2 (ENSACAG00000042556) #22	KIDINS220 (ENSACAG00000002386) #24	ENSACAG00000037631	MBOAT2 (ENSACAG00000002267) #25	ENSACAG00000041154	ASAP2 (ENSACAG00000002004) #37	ITGB1BP1 (ENSACAG00000001993) #36	CPSF3 (ENSACAG00000001759) #35	ENSACAG00000021110	IAH1 (ENSACAG00000001615) #34	ADAM17 (ENSACAG00000001356) #33	YWHAQ (ENSACAG00000001306) #32	ENSACAG00000039990	ENSACAG00000040391	ENSACAG00000040523	TAF1B (ENSACAG00000000152) #31
Elapidae	ANCESTRAL SPECIES		ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827.c #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Indian cobra	MODERN SPECIES		PXDN (ENSNNAG00000010488)	ENSNNAG00000010544	ENSNNAG00000010563	ENSNNAG00000010615	EIPR1 (ENSNNAG00000010664) #7	TRAPPC12 (ENSNNAG00000010766) #8	ADI1 (ENSNNAG00000010852) #9	RNASEH1 (ENSNNAG00000010875) #10	RPS7 (ENSNNAG00000010947)	COLEC11 (ENSNNAG00000010989) #11	DCDC2C (ENSNNAG00000011041) #15	SOX11 (ENSNNAG00000011078) #18	CMPK2 (ENSNNAG00000011083) #19	RSAD2 (ENSNNAG00000011105) #20	RNF144A (ENSNNAG00000011228) #21	ID2 (ENSNNAG00000011245) #22	ENSNNAG00000011258	KIDINS220 (ENSNNAG00000011277) #24	MBOAT2 (ENSNNAG00000011525) #25	ASAP2 (ENSNNAG00000011592) #37	ITGB1BP1 (ENSNNAG00000011812) #36	ENSNNAG00000011863	CPSF3 (ENSNNAG00000011872) #35	IAH1 (ENSNNAG00000011930) #34	ADAM17 (ENSNNAG00000011958) #33	YWHAQ (ENSNNAG00000012018) #32	TAF1B (ENSNNAG00000012041) #31	GRHL1 (ENSNNAG00000012148) #29	KLF11 (ENSNNAG00000012239) #28	ENSNNAG00000012268	ENSNNAG00000012297
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827.c #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827.c #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Eastern brown snake	MODERN SPECIES	4	PXDN (ENSPTXG00000010013)	MYT1L (ENSPTXG00000010897)	ENSPTXG00000010903	EIPR1 (ENSPTXG00000010906) #7	TRAPPC12 (ENSPTXG00000010911) #8	ADI1 (ENSPTXG00000010914) #9	RNASEH1 (ENSPTXG00000010917) #10	RPS7 (ENSPTXG00000010919)	ENSPTXG00000010920	COLEC11 (ENSPTXG00000010922) #11	DCDC2C (ENSPTXG00000010924) #15	SOX11 (ENSPTXG00000010926) #18	CMPK2 (ENSPTXG00000010928) #19	RSAD2 (ENSPTXG00000010934) #20	RNF144A (ENSPTXG00000010943) #21	ID2 (ENSPTXG00000010944) #22	KIDINS220 (ENSPTXG00000010945) #24	MBOAT2 (ENSPTXG00000010950) #25	ASAP2 (ENSPTXG00000010952) #37	ITGB1BP1 (ENSPTXG00000010957) #36	CPSF3 (ENSPTXG00000010959) #35	IAH1 (ENSPTXG00000010961) #34	ADAM17 (ENSPTXG00000010969) #33	YWHAQ (ENSPTXG00000012051) #32	ENSPTXG00000012054 #31	ENSPTXG00000012055 #31	GRHL1 (ENSPTXG00000012057) #29	KLF11 (ENSPTXG00000012059) #28	MTO1 (ENSPTXG00000012060)	RRM2 (ENSPTXG00000012071) #26	HPCAL1 (ENSPTXG00000012834)
Mainland tiger snake	MODERN SPECIES	61												SOX11 (ENSNSUG00000020465) #18	CMPK2 (ENSNSUG00000020464) #19	RSAD2 (ENSNSUG00000020463) #20	RNF144A (ENSNSUG00000020462) #21	ID2 (ENSNSUG00000020460) #22	KIDINS220 (ENSNSUG00000020459) #24	MBOAT2 (ENSNSUG00000020458) #25	ENSNSUG00000020457	ASAP2 (ENSNSUG00000020456) #37	ITGB1BP1 (ENSNSUG00000020455) #36	CPSF3 (ENSNSUG00000020429) #35	IAH1 (ENSNSUG00000020427) #34	ADAM17 (ENSNSUG00000020420) #33	YWHAQ (ENSNSUG00000020419) #32	TAF1B (ENSNSUG00000020418) #31	GRHL1 (ENSNSUG00000020417) #29	KLF11 (ENSNSUG00000020416) #28	MTO1 (ENSNSUG00000020415)	RRM2 (ENSNSUG00000020414) #26	HPCAL1 (ENSNSUG00000020412)
Blue-lipped sea krait	MODERN SPECIES	176																ID2 (ENSLLTG00000016701) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000158104.k	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000158104.k	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Three-toed box turtle	MODERN SPECIES	15	ENSTMTG00000001458	ENSTMTG00000001467	EIPR1 (ENSTMTG00000001485) #7	ENSTMTG00000001498 #8	ADI1 (ENSTMTG00000001532) #9	RNASEH1 (ENSTMTG00000001541) #10	RPS7 (ENSTMTG00000001554)	COLEC11 (ENSTMTG00000001570) #11	ALLC (ENSTMTG00000001582) #12	DCDC2C (ENSTMTG00000001593) #15	ENSTMTG00000001613	SOX11 (ENSTMTG00000001626) #18	CMPK2 (ENSTMTG00000001631) #19	RSAD2 (ENSTMTG00000001639) #20	RNF144A (ENSTMTG00000001652) #21	ID2 (ENSTMTG00000001659) #22	KIDINS220 (ENSTMTG00000001670) #24	MBOAT2 (ENSTMTG00000001696) #25	ASAP2 (ENSTMTG00000001754) #37	ITGB1BP1 (ENSTMTG00000002109) #36	CPSF3 (ENSTMTG00000002118) #35	IAH1 (ENSTMTG00000002139) #34	ADAM17 (ENSTMTG00000002145) #33	YWHAQ (ENSTMTG00000002159) #32	TAF1B (ENSTMTG00000002170) #31	ENSTMTG00000002182 #29	ENSTMTG00000002187 #29	KLF11 (ENSTMTG00000002194) #28	RRM2 (ENSTMTG00000002199) #26	HPCAL1 (ENSTMTG00000002212)	ODC1 (ENSTMTG00000002221)
painted turtle	MODERN SPECIES	2390												SOX11 (ENSCPBG00000014153) #18	CMPK2 (ENSCPBG00000014149) #19	RSAD2 (ENSCPBG00000014146) #20	RNF144A (ENSCPBG00000014144) #21	ID2 (ENSCPBG00000014130) #22	KIDINS220 (ENSCPBG00000014107) #24	MBOAT2 (ENSCPBG00000014088) #25	ASAP2 (ENSCPBG00000014081) #37	ITGB1BP1 (ENSCPBG00000014075) #36	CPSF3 (ENSCPBG00000014074) #35	IAH1 (ENSCPBG00000014070) #34	ADAM17 (ENSCPBG00000014063) #33	YWHAQ (ENSCPBG00000014061) #32	TAF1B (ENSCPBG00000014058) #31	GRHL1 (ENSCPBG00000014054) #29	KLF11 (ENSCPBG00000014051) #28	ENSCPBG00000014048	RRM2 (ENSCPBG00000014047) #26	ATP6V1C2 (ENSCPBG00000014032)	PDIA6 (ENSCPBG00000014031)
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000158104.l	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Abingdon island giant tortoise	MODERN SPECIES	1873																ID2 (ENSCABG00000022747) #22	KIDINS220 (ENSCABG00000022761) #24	MBOAT2 (ENSCABG00000022871) #25	ASAP2 (ENSCABG00000022892) #37	ITGB1BP1 (ENSCABG00000022906) #36	CPSF3 (ENSCABG00000022908) #35
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005009323	EIPR1 (ENSGEVG00005009234) #7	TRAPPC12 (ENSGEVG00005009146) #8	ADI1 (ENSGEVG00005009115) #9	RNASEH1 (ENSGEVG00005009097) #10	RPS7 (ENSGEVG00005009060)	COLEC11 (ENSGEVG00005009003) #11	ALLC (ENSGEVG00005008921) #12	DCDC2C (ENSGEVG00005008873) #15	ENSGEVG00005008842	SOX11 (ENSGEVG00005008815) #18	ENSGEVG00005008806	CMPK2 (ENSGEVG00005008784) #19	RSAD2 (ENSGEVG00005008769) #20	RNF144A (ENSGEVG00005008742) #21	ID2 (ENSGEVG00005008728) #22	KIDINS220 (ENSGEVG00005008688) #24	MBOAT2 (ENSGEVG00005008645) #25	ASAP2 (ENSGEVG00005008532) #37	ITGB1BP1 (ENSGEVG00005008492) #36	CPSF3 (ENSGEVG00005008438) #35	IAH1 (ENSGEVG00005008414) #34	ADAM17 (ENSGEVG00005008380) #33	YWHAQ (ENSGEVG00005008366) #32	TAF1B (ENSGEVG00005008345) #31	GRHL1 (ENSGEVG00005008039) #29	KLF11 (ENSGEVG00005007934) #28	RRM2 (ENSGEVG00005007899) #26	HPCAL1 (ENSGEVG00005007881)	ODC1 (ENSGEVG00005007862)	NOL10 (ENSGEVG00005007769)
Chinese turtle	MODERN SPECIES	1137															RNF144A (ENSPSIG00000004494) #21	ID2 (ENSPSIG00000004438) #22	KIDINS220 (ENSPSIG00000017562) #24	MBOAT2 (ENSPSIG00000017486) #25	ASAP2 (ENSPSIG00000017299) #37	ITGB1BP1 (ENSPSIG00000016662) #36	CPSF3 (ENSPSIG00000016144) #35	IAH1 (ENSPSIG00000015583) #34	ADAM17 (ENSPSIG00000013693) #33	YWHAQ (ENSPSIG00000012692) #32	TAF1B (ENSPSIG00000012081) #31	GRHL1 (ENSPSIG00000010930) #29	KLF11 (ENSPSIG00000010816) #28	RRM2 (ENSPSIG00000009363) #26
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00390000001793 #12	ENSGT00940000162396 #15	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Australian saltwater crocodile	MODERN SPECIES	38	ENSCPRG00005008598	EIPR1 (ENSCPRG00005008594) #7	TRAPPC12 (ENSCPRG00005008576) #8	ENSCPRG00005008559 #9	RNASEH1 (ENSCPRG00005008555) #10	ENSCPRG00005008536 #9	ENSCPRG00005008530 #9	COLEC11 (ENSCPRG00005008511) #11	ALLC (ENSCPRG00005008494) #12	DCDC2C (ENSCPRG00005008489) #15	SOX11 (ENSCPRG00005008466) #18	CMPK2 (ENSCPRG00005008440) #19	RSAD2 (ENSCPRG00005008433) #20	RNF144A (ENSCPRG00005008430) #21	UBE2F (ENSCPRG00005008370)	ID2 (ENSCPRG00005008324) #22	KIDINS220 (ENSCPRG00005007277) #24	MBOAT2 (ENSCPRG00005007103) #25	ASAP2 (ENSCPRG00005007065) #37	ITGB1BP1 (ENSCPRG00005007062) #36	CPSF3 (ENSCPRG00005007046) #35	IAH1 (ENSCPRG00005007037) #34	ADAM17 (ENSCPRG00005006916) #33	ENSCPRG00005006866 ##32	YWHAQ (ENSCPRG00005006856) #32	TAF1B (ENSCPRG00005006808) #31	GRHL1 (ENSCPRG00005006677) #29	KLF11 (ENSCPRG00005006661) #28	RRM2 (ENSCPRG00005006653) #26	HPCAL1 (ENSCPRG00005006636)	ODC1 (ENSCPRG00005006625)
Aves	ANCESTRAL SPECIES	10	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Neognathae	ANCESTRAL SPECIES	2	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Anatidae	ANCESTRAL SPECIES		ENSGT01050000245791	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623.a #37	ENSGT00390000003990 #36	ENSGT00940000155699.h #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Duck	MODERN SPECIES	21	TPO (ENSAPLG00000015727)	PXDN (ENSAPLG00000015757)	MYT1L (ENSAPLG00000016052)	ENSAPLG00000031076	EIPR1 (ENSAPLG00000016100) #7	TRAPPC12 (ENSAPLG00000000576) #8	ADI1 (ENSAPLG00000001901) #9	RNASEH1 (ENSAPLG00000001961) #10	RPS7 (ENSAPLG00000002438)	COLEC11 (ENSAPLG00000025748) #11	SOX11 (ENSAPLG00000025127) #18	ENSAPLG00000017954	ENSAPLG00000022011	RSAD2 (ENSAPLG00000006016) #20	RNF144A (ENSAPLG00000006187) #21	ID2 (ENSAPLG00000020880) #22	KIDINS220 (ENSAPLG00000015856) #24	MBOAT2 (ENSAPLG00000015705) #25	ASAP2 (ENSAPLG00000006573) #37	ITGB1BP1 (ENSAPLG00000006929) #36	CPSF3 (ENSAPLG00000006941) #35	IAH1 (ENSAPLG00000007422) #34	ADAM17 (ENSAPLG00000007716) #33	YWHAQ (ENSAPLG00000023697) #32	TAF1B (ENSAPLG00000008537) #31	GRHL1 (ENSAPLG00000008667) #29	KLF11 (ENSAPLG00000009146) #28	ENSAPLG00000030281	RRM2 (ENSAPLG00000009301) #26	ODC1 (ENSAPLG00000009531)	NOL10 (ENSAPLG00000009885)
Pink-footed goose	MODERN SPECIES	48				ENSABRG00000009007 #7	TRAPPC12 (ENSABRG00000009014) #8	ADI1 (ENSABRG00000009028) #9	RNASEH1 (ENSABRG00000009041) #10	RPS7 (ENSABRG00000009056)	COLEC11 (ENSABRG00000009065) #11	SOX11 (ENSABRG00000009128) #18	CMPK2 (ENSABRG00000009165) #19	RSAD2 (ENSABRG00000009173) #20	RNF144A (ENSABRG00000009186) #21	ENSABRG00000009192	ENSABRG00000009198	ID2 (ENSABRG00000009225) #22	KIDINS220 (ENSABRG00000009278) #24	MBOAT2 (ENSABRG00000009397) #25	ASAP2 (ENSABRG00000009432) #37	ITGB1BP1 (ENSABRG00000009505) #36	CPSF3 (ENSABRG00000009595) #35	IAH1 (ENSABRG00000010649) #34	ADAM17 (ENSABRG00000010665) #33	YWHAQ (ENSABRG00000010695) #32	TAF1B (ENSABRG00000010705) #31	GRHL1 (ENSABRG00000010717) #29	KLF11 (ENSABRG00000010724) #28	RRM2 (ENSABRG00000010731) #26	HPCAL1 (ENSABRG00000010754)	ODC1 (ENSABRG00000010758)	NOL10 (ENSABRG00000010777)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Japanese quail	MODERN SPECIES	21	ENSCJPG00005008187	SNTG2 (ENSCJPG00005008231)	TPO (ENSCJPG00005008232)	PXDN (ENSCJPG00005008255)	MYT1L (ENSCJPG00005008311)	EIPR1 (ENSCJPG00005008562) #7	TRAPPC12 (ENSCJPG00005008564) #8	ADI1 (ENSCJPG00005008568) #9	RNASEH1 (ENSCJPG00005008569) #10	RPS7 (ENSCJPG00005008570)	COLEC11 (ENSCJPG00005008571) #11	SOX11 (ENSCJPG00005008603) #18	CMPK2 (ENSCJPG00005008614) #19	RSAD2 (ENSCJPG00005008615) #20	RNF144A (ENSCJPG00005008634) #21	Id2 (ENSCJPG00005008665) #22	KIDINS220 (ENSCJPG00005008683) #24	MBOAT2 (ENSCJPG00005011009) #25	ASAP2 (ENSCJPG00005011015) #37	ITGB1BP1 (ENSCJPG00005011017) #36	CPSF3 (ENSCJPG00005011027) #35	IAH1 (ENSCJPG00005011028) #34	ADAM17 (ENSCJPG00005011030) #33	YWHAQ (ENSCJPG00005011031) #32	TAF1B (ENSCJPG00005011032) #31	GRHL1 (ENSCJPG00005011034) #29	KLF11 (ENSCJPG00005011036) #28	ENSCJPG00005011037	RRM2 (ENSCJPG00005011038) #26	HPCAL1 (ENSCJPG00005011043)	ODC1 (ENSCJPG00005011044)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Chicken	MODERN SPECIES	22	SNTG2 (ENSGALG00010002324)	TPO (ENSGALG00010002300)	PXDN (ENSGALG00010003388)	MYT1L (ENSGALG00010002390)	TSSC1 (ENSGALG00010002413) #7	TRAPPC12 (ENSGALG00010002422) #8	ADI1 (ENSGALG00010003471) #9	RNASEH1 (ENSGALG00010002291) #10	RPS7 (ENSGALG00010003474)	COLEC11 (ENSGALG00010003478) #11	SOX11 (ENSGALG00010003543) #18	CMPK2 (ENSGALG00010002380) #19	RSAD2 (ENSGALG00010003583) #20	RNF144A (ENSGALG00010003597) #21	ENSGALG00010003853	ID2 (ENSGALG00010003117) #22	KIDINS220 (ENSGALG00010003160) #24	MBOAT2 (ENSGALG00010003201) #25	ASAP2 (ENSGALG00010003242) #37	ENSGALG00010003244	ITGB1BP1 (ENSGALG00010003253) #36	CPSF3 (ENSGALG00010003272) #35	IAH1 (ENSGALG00010003295) #34	ADAM17 (ENSGALG00010003348) #33	YWHAQ (ENSGALG00010003375) #32	TAF1B (ENSGALG00010004230) #31	GRHL1 (ENSGALG00010002433) #29	KLF11 (ENSGALG00010002444) #28	RRM2 (ENSGALG00010002462) #26	HPCAL1 (ENSGALG00010002474)	ODC (ENSGALG00010003604)
Turkey	MODERN SPECIES	11	ENSMGAG00000020117	ENSMGAG00000014011	ENSMGAG00000014010	ENSMGAG00000014009 #26	ENSMGAG00000014008 #28	ENSMGAG00000017891 #29	ENSMGAG00000014007 #29	TAF1B (ENSMGAG00000014006) #31	ENSMGAG00000018898 ##32	ENSMGAG00000014000 #33	ENSMGAG00000014004 #32	CPSF3 (ENSMGAG00000013995) #35	ENSMGAG00000013988 #37	ENSMGAG00000013993 #36	ENSMGAG00000017593	ID2 (ENSMGAG00000013985) #22	ENSMGAG00000013984 #21	ENSMGAG00000019604 #20	ENSMGAG00000013982 #19	ENSMGAG00000019338 #18	ENSMGAG00000013980 #11	RPS7 (ENSMGAG00000013978)	ENSMGAG00000013979 #10	ENSMGAG00000013977 #9	ENSMGAG00000013975 #8	ENSMGAG00000013974 #7	TRIB2 (ENSMGAG00000019802)	LRATD1 (ENSMGAG00000022775)	NBAS (ENSMGAG00000014024)	DDX1 (ENSMGAG00000014025)	ENSMGAG00000022947
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612.p #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Flycatcher	MODERN SPECIES	21	PXDN (ENSFALG00000002037)	MYT1L (ENSFALG00000002053)	ENSFALG00000026193	EIPR1 (ENSFALG00000002059) #7	TRAPPC12 (ENSFALG00000002062) #8	ADI1 (ENSFALG00000028712) #9	RNASEH1 (ENSFALG00000027698) #10	RPS7 (ENSFALG00000024743)	COLEC11 (ENSFALG00000002076) #11	ENSFALG00000024355	SOX11 (ENSFALG00000014554) #18	ENSFALG00000025049	CMPK2 (ENSFALG00000023392) #19	RSAD2 (ENSFALG00000006483) #20	RNF144A (ENSFALG00000027037) #21	ID2 (ENSFALG00000006518) #22	KIDINS220 (ENSFALG00000006522) #24	MBOAT2 (ENSFALG00000006544) #25	ASAP2 (ENSFALG00000006556) #37	ITGB1BP1 (ENSFALG00000026175) #36	CPSF3 (ENSFALG00000006572) #35	IAH1 (ENSFALG00000006579) #34	ADAM17 (ENSFALG00000006611) #33	YWHAQ (ENSFALG00000023362) #32	TAF1B (ENSFALG00000006636) #31	GRHL1 (ENSFALG00000006639) #29	KLF11 (ENSFALG00000006648) #28	ENSFALG00000027922	RRM2 (ENSFALG00000022902) #26	HPCAL1 (ENSFALG00000006653)	ODC1 (ENSFALG00000006656)
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612.p #29	ENSGT00940000157612.o #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00990000204270	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612.o #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Zebra finch	MODERN SPECIES	23	ACP1 (ENSTGUG00000027759)	ALKAL2 (ENSTGUG00000012951)	SNTG2 (ENSTGUG00000012954)	TPO (ENSTGUG00000012960)	PXDN (ENSTGUG00000012962)	MYT1L (ENSTGUG00000012971)	EIPR1 (ENSTGUG00000012973) #7	TRAPPC12 (ENSTGUG00000012974) #8	RNASEH1 (ENSTGUG00000012980) #10	RPS7 (ENSTGUG00000012983)	COLEC11 (ENSTGUG00000022930) #11	SOX11 (ENSTGUG00000012987) #18	ENSTGUG00000022230	RSAD2 (ENSTGUG00000012992) #20	RNF144A (ENSTGUG00000022180) #21	ID2 (ENSTGUG00000012998) #22	KIDINS220 (ENSTGUG00000012999) #24	MBOAT2 (ENSTGUG00000013004) #25	ASAP2 (ENSTGUG00000013006) #37	ITGB1BP1 (ENSTGUG00000013015) #36	CPSF3 (ENSTGUG00000013016) #35	IAH1 (ENSTGUG00000013025) #34	ADAM17 (ENSTGUG00000013028) #33	YWHAQ (ENSTGUG00000013035) #32	TAF1B (ENSTGUG00000013037) #31	GRHL1 (ENSTGUG00000013038) #29	KLF11 (ENSTGUG00000013041) #28	RRM2 (ENSTGUG00000013042) #26	HPCAL1 (ENSTGUG00000013044)	ODC1 (ENSTGUG00000013045)	NOL10 (ENSTGUG00000013047)
Common canary	MODERN SPECIES	1	ALKAL2 (ENSSCAG00000011763)	TMEM18 (ENSSCAG00000011774)	SNTG2 (ENSSCAG00000011777)	TPO (ENSSCAG00000011790)	PXDN (ENSSCAG00000011834)	MYT1L (ENSSCAG00000012053)	EIPR1 (ENSSCAG00000012104) #7	TRAPPC12 (ENSSCAG00000012110) #8	ADI1 (ENSSCAG00000012116) #9	RNASEH1 (ENSSCAG00000012122) #10	RPS7 (ENSSCAG00000012160)	COLEC11 (ENSSCAG00000012167) #11	ENSSCAG00000012187	RSAD2 (ENSSCAG00000012190) #20	RNF144A (ENSSCAG00000012205) #21	ID2 (ENSSCAG00000012234) #22	KIDINS220 (ENSSCAG00000012242) #24	MBOAT2 (ENSSCAG00000012256) #25	ASAP2 (ENSSCAG00000012272) #37	ITGB1BP1 (ENSSCAG00000012285) #36	CPSF3 (ENSSCAG00000012290) #35	IAH1 (ENSSCAG00000012295) #34	ADAM17 (ENSSCAG00000012301) #33	YWHAQ (ENSSCAG00000012308) #32	GRHL1 (ENSSCAG00000012341) #29	KLF11 (ENSSCAG00000012362) #28	RRM2 (ENSSCAG00000012371) #26	HPCAL1 (ENSSCAG00000012381)	ODC1 (ENSSCAG00000012395)	NOL10 (ENSSCAG00000012402)	ATP6V1C2 (ENSSCAG00000012422)
Medium ground finch	MODERN SPECIES	21													ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473) #20	RNF144A (ENSGFOG00000008461) #21	ID2 (ENSGFOG00000008458) #22	KIDINS220 (ENSGFOG00000008427) #24	MBOAT2 (ENSGFOG00000008417) #25	ASAP2 (ENSGFOG00000008371) #37	ITGB1BP1 (ENSGFOG00000008352) #36	ENSGFOG00000008345 #35	ENSGFOG00000008332 #35	IAH1 (ENSGFOG00000008321) #34	ADAM17 (ENSGFOG00000008025) #33	YWHAQ (ENSGFOG00000007990) #32	TAF1B (ENSGFOG00000007971) #31	ENSGFOG00000007959 #29	ENSGFOG00000007956 #29	KLF11 (ENSGFOG00000007951) #28	RRM2 (ENSGFOG00000007690) #26	HPCAL1 (ENSGFOG00000007664)
Great tit	MODERN SPECIES	22	SNTG2 (ENSPMJG00000010031)	TPO (ENSPMJG00000010034)	PXDN (ENSPMJG00000010047)	MYT1L (ENSPMJG00000010070)	ENSPMJG00000010238	EIPR1 (ENSPMJG00000010339) #7	TRAPPC12 (ENSPMJG00000010410) #8	ADI1 (ENSPMJG00000010411) #9	RNASEH1 (ENSPMJG00000010412) #10	RPS7 (ENSPMJG00000010413)	COLEC11 (ENSPMJG00000010415) #11	SOX11 (ENSPMJG00000010517) #18	CMPK2 (ENSPMJG00000010562) #19	RSAD2 (ENSPMJG00000010563) #20	RNF144A (ENSPMJG00000010564) #21	ID2 (ENSPMJG00000010632) #22	KIDINS220 (ENSPMJG00000010635) #24	MBOAT2 (ENSPMJG00000010666) #25	ASAP2 (ENSPMJG00000010679) #37	ITGB1BP1 (ENSPMJG00000012392) #36	CPSF3 (ENSPMJG00000012393) #35	IAH1 (ENSPMJG00000012394) #34	ADAM17 (ENSPMJG00000012400) #33	YWHAQ (ENSPMJG00000012403) #32	TAF1B (ENSPMJG00000012405) #31	GRHL1 (ENSPMJG00000012412) #29	KLF11 (ENSPMJG00000012416) #28	RRM2 (ENSPMJG00000012420) #26	HPCAL1 (ENSPMJG00000012424)	ODC1 (ENSPMJG00000012426)	NOL10 (ENSPMJG00000012429)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137 #7	ENSGT00390000002448 #8	ENSGT00390000008195 #9	ENSGT00390000003466 #10	ENSGT00390000014122	ENSGT00940000159468 #11	ENSGT00940000161652 #18	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #24	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000155623 #37	ENSGT00390000003990 #36	ENSGT00940000155699 #35	ENSGT00390000008069 #34	ENSGT00940000155443 #33	ENSGT01090000260040.b.b.b.b #32	ENSGT00440000033827 #31	ENSGT00940000157612 #29	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #26	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900
Kakapo	MODERN SPECIES	23	ENSSHBG00005021319	TMEM18 (ENSSHBG00005021320)	SNTG2 (ENSSHBG00005021323)	TPO (ENSSHBG00005021326)	PXDN (ENSSHBG00005000592)	MYT1L (ENSSHBG00005000594)	EIPR1 (ENSSHBG00005000602) #7	TRAPPC12 (ENSSHBG00005000603) #8	ADI1 (ENSSHBG00005006001) #9	RNASEH1 (ENSSHBG00005006018) #10	RPS7 (ENSSHBG00005006046)	COLEC11 (ENSSHBG00005006078) #11	ENSSHBG00005006101	RSAD2 (ENSSHBG00005006118) #20	RNF144A (ENSSHBG00005006232) #21	ID2 (ENSSHBG00005006245) #22	KIDINS220 (ENSSHBG00005006291) #24	MBOAT2 (ENSSHBG00005006345) #25	ASAP2 (ENSSHBG00005006393) #37	ITGB1BP1 (ENSSHBG00005006432) #36	CPSF3 (ENSSHBG00005006481) #35	IAH1 (ENSSHBG00005006527) #34	ADAM17 (ENSSHBG00005006619) #33	YWHAQ (ENSSHBG00005006806) #32	TAF1B (ENSSHBG00005006841) #31	ENSSHBG00005006892 #29	ENSSHBG00005006922 #29	KLF11 (ENSSHBG00005006947) #28	RRM2 (ENSSHBG00005006975) #26	HPCAL1 (ENSSHBG00005007002)	ODC1 (ENSSHBG00005007026)
Golden eagle	MODERN SPECIES	6	SNTG2 (ENSACCG00020005652)	TPO (ENSACCG00020005486)	PXDN (ENSACCG00020005284)	MYT1L (ENSACCG00020005045)	EIPR1 (ENSACCG00020004841) #7	TRAPPC12 (ENSACCG00020004825) #8	ADI1 (ENSACCG00020004813) #9	RNASEH1 (ENSACCG00020004806) #10	RPS7 (ENSACCG00020004797)	COLEC11 (ENSACCG00020004791) #11	SOX11 (ENSACCG00020004781) #18	CMPK2 (ENSACCG00020004778) #19	RSAD2 (ENSACCG00020004774) #20	RNF144A (ENSACCG00020004762) #21	ENSACCG00020004746	ID2 (ENSACCG00020004736) #22	KIDINS220 (ENSACCG00020014291) #24	MBOAT2 (ENSACCG00020014234) #25	ASAP2 (ENSACCG00020013669) #37	ITGB1BP1 (ENSACCG00020012708) #36	CPSF3 (ENSACCG00020012650) #35	IAH1 (ENSACCG00020012620) #34	ADAM17 (ENSACCG00020012584) #33	YWHAQ (ENSACCG00020012565) #32	TAF1B (ENSACCG00020012536) #31	ENSACCG00020012519 #29	KLF11 (ENSACCG00020012500) #28	RRM2 (ENSACCG00020012338) #26	HPCAL1 (ENSACCG00020012207)	ODC1 (ENSACCG00020012187)	NOL10 (ENSACCG00020012136)
African ostrich	MODERN SPECIES	883																ID2 (ENSSCUG00000016689) #22