Gnathostomata	ANCESTRAL SPECIES	162													ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155734	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33
Euteleostomi	ANCESTRAL SPECIES	10	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155734	ENSGT01060000248676	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35
Sarcopterygii	ANCESTRAL SPECIES	10	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT01060000248676	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Mammalia	ANCESTRAL SPECIES	38	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Theria	ANCESTRAL SPECIES	35	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Pecora	ANCESTRAL SPECIES	5	ENSGT00910000145076	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.fb.a #37
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.fb.a #37
Bovidae	ANCESTRAL SPECIES	5	ENSGT00910000145076	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.fb.a #37
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES	9	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00940000154706.ib #17	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.a #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699.d #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.fb.a.a #37
Rambouillet Sheep	MODERN SPECIES	19	MRRF (ENSOARG00020014233) #7	RBM18 (ENSOARG00020014399) #8	LHX6 (ENSOARG00020014452) #9	MORN5 (ENSOARG00020014653) #10	NDUFA8 (ENSOARG00020014774) #11	ENSOARG00020014819 #12	DAB2IP (ENSOARG00020014930) #13	ENSOARG00020015864 #14	ENSOARG00020016051 #15	ENSOARG00020016131 #16	ENSOARG00020006554 #17	ENSOARG00020006589 #18	CMPK2 (ENSOARG00020006720) #19	ENSOARG00020006787 #20	RNF144A (ENSOARG00020006856) #21	ID2 (ENSOARG00020006940) #22	KIDINS220 (ENSOARG00020007030) #23	MBOAT2 (ENSOARG00020007653) #24	ASAP2 (ENSOARG00020007758) #25	ITGB1BP1 (ENSOARG00020008178) #26	CPSF3 (ENSOARG00020008301) #27	IAH1 (ENSOARG00020008401) #28	ADAM17 (ENSOARG00020008512) #29	YWHAQ (ENSOARG00020008682) #30	TAF1B (ENSOARG00020008727) #31	GRHL1 (ENSOARG00020008773) #32	KLF11 (ENSOARG00020008965) #33	CYS1 (ENSOARG00020009035) #34	ENSOARG00020009097 #35	HPCAL1 (ENSOARG00020009151) #36	ODC1 (ENSOARG00020009225) #37
Goat	MODERN SPECIES	2	RBM18 (ENSCHIG00000026444) #8	LHX6 (ENSCHIG00000012218) #9	MORN5 (ENSCHIG00000025363) #10	NDUFA8 (ENSCHIG00000023321) #11	TTLL11 (ENSCHIG00000016558) #12	DAB2IP (ENSCHIG00000006785) #13	ENSCHIG00000023562 #14	ENSCHIG00000009248 #15	ENSCHIG00000023895 #16	ENSCHIG00000021333 #17	ENSCHIG00000014881	SOX11 (ENSCHIG00000024868)	CMPK2 (ENSCHIG00000012790) #19	RSAD2 (ENSCHIG00000021832) #20	RNF144A (ENSCHIG00000016336) #21	ENSCHIG00000018361 #22	KIDINS220 (ENSCHIG00000026710) #23	MBOAT2 (ENSCHIG00000026251) #24	ENSCHIG00000012410	ASAP2 (ENSCHIG00000022796) #25	ENSCHIG00000020028 #26	CPSF3 (ENSCHIG00000013973) #27	IAH1 (ENSCHIG00000016467) #28	ADAM17 (ENSCHIG00000013595) #29	YWHAQ (ENSCHIG00000012589) #30	ENSCHIG00000012158	TAF1B (ENSCHIG00000013783) #31	ENSCHIG00000026755 #32	KLF11 (ENSCHIG00000011294) #33	CYS1 (ENSCHIG00000018115) #34	ENSCHIG00000004531
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000156464.b ##22
Goat	MODERN SPECIES	22	KDM4A (ENSCHIG00000013137)	ST3GAL3 (ENSCHIG00000025175)	ARTN (ENSCHIG00000020016)	IPO13 (ENSCHIG00000008341)	DPH2 (ENSCHIG00000000512)	ATP6V0B (ENSCHIG00000017292)	B4GALT2 (ENSCHIG00000008852)	CCDC24 (ENSCHIG00000019944)	ENSCHIG00000026700	ENSCHIG00000016150	KLF17 (ENSCHIG00000006866)	DMAP1 (ENSCHIG00000022071)	ENSCHIG00000027211	ERI3 (ENSCHIG00000024241)	ENSCHIG00000016127	ENSCHIG00000007125 ##22	ENSCHIG00000019592	TMEM53 (ENSCHIG00000017959)	ENSCHIG00000013485	ARMH1 (ENSCHIG00000021996)	KIF2C (ENSCHIG00000021902)	ENSCHIG00000020368	BEST4 (ENSCHIG00000014606)	PLK3 (ENSCHIG00000000804)	DYNLT4 (ENSCHIG00000009436)	BTBD19 (ENSCHIG00000013544)	PTCH2 (ENSCHIG00000017723)	EIF2B3 (ENSCHIG00000015663)	HECTD3 (ENSCHIG00000025462)	UROD (ENSCHIG00000026792)	ZSWIM5 (ENSCHIG00000026563)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a.e #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.fb.a #37
Bos	ANCESTRAL SPECIES	5	ENSGT00390000010743.b	ENSGT00910000145076	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a.e #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00990000204082	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.b ##30	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Bos_a	ANCESTRAL SPECIES	6												ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Wild yak	MODERN SPECIES	1783																ID2 (ENSBMUG00000003840) #22	KIDINS220 (ENSBMUG00000003783) #23	MBOAT2 (ENSBMUG00000003625) #24	ENSBMUG00000003596	ASAP2 (ENSBMUG00000003572) #25	ITGB1BP1 (ENSBMUG00000003480) #26	CPSF3 (ENSBMUG00000003413) #27	IAH1 (ENSBMUG00000003367) #28	ADAM17 (ENSBMUG00000003344) #29	YWHAQ (ENSBMUG00000003324) #30
Domestic yak	MODERN SPECIES	28												SOX11 (ENSBGRG00000015914)	CMPK2 (ENSBGRG00000015652) #19	RSAD2 (ENSBGRG00000015611) #20	RNF144A (ENSBGRG00000015479) #21	ID2 (ENSBGRG00000015396) #22	ENSBGRG00000015325	KIDINS220 (ENSBGRG00000014341) #23	MBOAT2 (ENSBGRG00000014129) #24	ASAP2 (ENSBGRG00000013865) #25	ITGB1BP1 (ENSBGRG00000013746) #26	CPSF3 (ENSBGRG00000013338) #27	IAH1 (ENSBGRG00000013251) #28	ADAM17 (ENSBGRG00000012923) #29	YWHAQ (ENSBGRG00000012872) #30	ENSBGRG00000012819 ##30	ENSBGRG00000012787	TAF1B (ENSBGRG00000012581) #31	GRHL1 (ENSBGRG00000011381) #32	ENSBGRG00000011303	KLF11 (ENSBGRG00000011215) #33
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000010743.b	ENSGT00390000005084 #7	ENSGT00390000013765 #8	ENSGT00940000156868 #9	ENSGT00390000018089 #10	ENSGT00390000008938 #11	ENSGT00940000156689 #12	ENSGT00940000155853 #13	ENSGT00950000182858.B.b.a.e #14	ENSGT00950000182858.B.b.b #15	ENSGT00950000182858.B.a.d #16	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.b ##30	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Cow	MODERN SPECIES	2	RBM18 (ENSBTAG00000016367) #8	LHX6 (ENSBTAG00000005525) #9	MORN5 (ENSBTAG00000004296) #10	NDUFA8 (ENSBTAG00000004295) #11	ENSBTAG00000012827 #12	DAB2IP (ENSBTAG00000008232) #13	GGTA1 (ENSBTAG00000012090) #14	ENSBTAG00000039186 #15	ENSBTAG00000039201 #16	SOX11 (ENSBTAG00000050114)	ENSBTAG00000051441	CMPK2 (ENSBTAG00000019979) #19	RSAD2 (ENSBTAG00000016061) #20	RNF144A (ENSBTAG00000044064) #21	ENSBTAG00000037793	ID2 (ENSBTAG00000021187) #22	KIDINS220 (ENSBTAG00000007963) #23	MBOAT2 (ENSBTAG00000008160) #24	ASAP2 (ENSBTAG00000002329) #25	ITGB1BP1 (ENSBTAG00000013063) #26	CPSF3 (ENSBTAG00000019735) #27	IAH1 (ENSBTAG00000001140) #28	ADAM17 (ENSBTAG00000001141) #29	YWHAQ (ENSBTAG00000002108) ##30	ENSBTAG00000048394	TAF1B (ENSBTAG00000007543) #31	GRHL1 (ENSBTAG00000007485) #32	KLF11 (ENSBTAG00000046218) #33	CYS1 (ENSBTAG00000052669) #34	RRM2 (ENSBTAG00000008216) #35	HPCAL1 (ENSBTAG00000004259) #36
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005003186	PTGS1 (ENSBIXG00005003219)	RBM18 (ENSBIXG00005019751) #8	LHX6 (ENSBIXG00005019970) #9	ENSBIXG00005007672 #10	NDUFA8 (ENSBIXG00005003287) #11	TTLL11 (ENSBIXG00005003298) #12	DAB2IP (ENSBIXG00005005534) #13	ENSBIXG00005020351 #14	ENSBIXG00005020391	ENSBIXG00005020418 #15	SOX11 (ENSBIXG00005020448)	CMPK2 (ENSBIXG00005003470) #19	RSAD2 (ENSBIXG00005020552) #20	RNF144A (ENSBIXG00005020588) #21	ID2 (ENSBIXG00005020723) #22	KIDINS220 (ENSBIXG00005021201) #23	MBOAT2 (ENSBIXG00005021383) #24	ASAP2 (ENSBIXG00005021521) #25	ITGB1BP1 (ENSBIXG00005021598) #26	CPSF3 (ENSBIXG00005003653) #27	IAH1 (ENSBIXG00005021763) #28	ADAM17 (ENSBIXG00005002613) #29	YWHAQ (ENSBIXG00005021830) #30	ENSBIXG00005021842	TAF1B (ENSBIXG00005021864) #31	GRHL1 (ENSBIXG00005003698) #32	KLF11 (ENSBIXG00005021989) #33	ENSBIXG00005003712 #34	RRM2 (ENSBIXG00005022029) #35	HPCAL1 (ENSBIXG00005006887) #36
American bison	MODERN SPECIES	3221	MRRF (ENSBBBG00000012462) #7	RBM18 (ENSBBBG00000012432) #8	ENSBBBG00000001879	MORN5 (ENSBBBG00000012415) #10	NDUFA8 (ENSBBBG00000012402) #11	ENSBBBG00000012397 #12	ENSBBBG00000002359 #12	DAB2IP (ENSBBBG00000012385) #13	ENSBBBG00000012306 #14	ENSBBBG00000002314 #15	ENSBBBG00000002313 #16	ENSBBBG00000012273	ENSBBBG00000012270	RSAD2 (ENSBBBG00000012264) #20	RNF144A (ENSBBBG00000007447) #21	ID2 (ENSBBBG00000012256) #22	KIDINS220 (ENSBBBG00000012237) #23	ENSBBBG00000012162	MBOAT2 (ENSBBBG00000012157) #24	ASAP2 (ENSBBBG00000012138) #25	ENSBBBG00000012059	ITGB1BP1 (ENSBBBG00000012050) #26	CPSF3 (ENSBBBG00000012019) #27	IAH1 (ENSBBBG00000008101) #28	ADAM17 (ENSBBBG00000002244) #29	YWHAQ (ENSBBBG00000011974) #30	TAF1B (ENSBBBG00000011961) #31	GRHL1 (ENSBBBG00000011949) #32	KLF11 (ENSBBBG00000011923) #33	RRM2 (ENSBBBG00000011911) #35	HPCAL1 (ENSBBBG00000007122) #36
Siberian musk deer	MODERN SPECIES	238	PTGS1 (ENSMMSG00000003179)	MRRF (ENSMMSG00000003259) #7	RBM18 (ENSMMSG00000003283) #8	LHX6 (ENSMMSG00000003304) #9	MORN5 (ENSMMSG00000003337) #10	NDUFA8 (ENSMMSG00000003353) #11	TTLL11 (ENSMMSG00000003370) #12	DAB2IP (ENSMMSG00000003463) #13	ENSMMSG00000003726	ENSMMSG00000003739 #14	ENSMMSG00000003765 #15	ENSMMSG00000003776 #16	CMPK2 (ENSMMSG00000003809) #19	RSAD2 (ENSMMSG00000003822) #20	RNF144A (ENSMMSG00000003832) #21	ID2 (ENSMMSG00000003856) #22	KIDINS220 (ENSMMSG00000003882) #23	MBOAT2 (ENSMMSG00000003927) #24	ASAP2 (ENSMMSG00000000274) #25	ENSMMSG00000000578 #26	CPSF3 (ENSMMSG00000000621) #27	ENSMMSG00000000723 #28	ADAM17 (ENSMMSG00000000759) #29	YWHAQ (ENSMMSG00000000770) #30	TAF1B (ENSMMSG00000000824) #31	GRHL1 (ENSMMSG00000000910) #32	KLF11 (ENSMMSG00000001004) #33	CYS1 (ENSMMSG00000001021) #34	ENSMMSG00000001037 #35	HPCAL1 (ENSMMSG00000001078) #36	ENSMMSG00000001108 ##37
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	1323	SLC25A43 (ENSCHYG00000012551)	SLC25A5 (ENSCHYG00000012593)	STEEP1 (ENSCHYG00000012674)	UBE2A (ENSCHYG00000012792)	NKRF (ENSCHYG00000012910)	SEPTIN6 (ENSCHYG00000012968)	SOWAHD (ENSCHYG00000013226)	ENSCHYG00000013248	ENSCHYG00000013306	UPF3B (ENSCHYG00000013449)	ENSCHYG00000013587	ENSCHYG00000013639	ENSCHYG00000013684	NKAP (ENSCHYG00000013797)	ENSCHYG00000013948	ENSCHYG00000014030 #22	ENSCHYG00000014045	ZBTB33 (ENSCHYG00000014073)	TMEM255A (ENSCHYG00000014120)	ATP1B4 (ENSCHYG00000014471)	ENSCHYG00000014546	LAMP2 (ENSCHYG00000014639)	CUL4B (ENSCHYG00000014824)	MCTS1 (ENSCHYG00000015357)	ENSCHYG00000015647	ENSCHYG00000015665	GRIA3 (ENSCHYG00000015734)	ENSCHYG00000016068	ENSCHYG00000016724	XIAP (ENSCHYG00000016805)	STAG2 (ENSCHYG00000016931)
Yarkand deer	MODERN SPECIES	2	PTGS1 (ENSCHYG00000017893)	ENSCHYG00000017724	MRRF (ENSCHYG00000017424) #7	ENSCHYG00000017363 #8	LHX6 (ENSCHYG00000017135) #9	MORN5 (ENSCHYG00000017039) #10	NDUFA8 (ENSCHYG00000016988) #11	ENSCHYG00000016926 #12	DAB2IP (ENSCHYG00000016211) #13	ENSCHYG00000016003 #14	ENSCHYG00000015664 #16	ENSCHYG00000015614	CMPK2 (ENSCHYG00000015445) #19	RSAD2 (ENSCHYG00000015364) #20	RNF144A (ENSCHYG00000015190) #21	ID2 (ENSCHYG00000015082) #22	KIDINS220 (ENSCHYG00000013747) #23	MBOAT2 (ENSCHYG00000013496) #24	ENSCHYG00000013479	ASAP2 (ENSCHYG00000012499) #25	ENSCHYG00000012310 #26	CPSF3 (ENSCHYG00000012112) #27	IAH1 (ENSCHYG00000012019) #28	ADAM17 (ENSCHYG00000011771) #29	YWHAQ (ENSCHYG00000011701) #30	ENSCHYG00000011680	TAF1B (ENSCHYG00000011467) #31	GRHL1 (ENSCHYG00000011321) #32	KLF11 (ENSCHYG00000011297) #33	ENSCHYG00000011258 #35	ENSCHYG00000011216
Cetacea	ANCESTRAL SPECIES	16	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.db.b #37
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.db.b #37
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.db.b #37
Dolphin	MODERN SPECIES	3559																ID2 (ENSTTRG00000008691) #22	KIDINS220 (ENSTTRG00000008701) #23
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.db.b #37
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000162505	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d.b	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.db.b #37
Beluga whale	MODERN SPECIES	37														ENSDLEG00000004773	RNF144A (ENSDLEG00000004760) #21	ID2 (ENSDLEG00000004751) #22	KIDINS220 (ENSDLEG00000004637) #23	MBOAT2 (ENSDLEG00000004585) #24	ASAP2 (ENSDLEG00000004523) #25	ITGB1BP1 (ENSDLEG00000004511) #26	CPSF3 (ENSDLEG00000004493) #27	IAH1 (ENSDLEG00000004484) #28	ENSDLEG00000004471	ADAM17 (ENSDLEG00000004858) #29	YWHAQ (ENSDLEG00000004846) #30	TAF1B (ENSDLEG00000004806) #31	GRHL1 (ENSDLEG00000004790) #32	KLF11 (ENSDLEG00000004778) #33	CYS1 (ENSDLEG00000004756) #34	ENSDLEG00000004724 #35	HPCAL1 (ENSDLEG00000004713) #36
Narwhal	MODERN SPECIES	305	ALKAL2 (ENSMMNG00015008804)	TMEM18 (ENSMMNG00015008793)	SNTG2 (ENSMMNG00015008757)	TPO (ENSMMNG00015008602)	PXDN (ENSMMNG00015008507)	MYT1L (ENSMMNG00015008281)	EIPR1 (ENSMMNG00015008117)	TRAPPC12 (ENSMMNG00015008082)	ADI1 (ENSMMNG00015008063)	RNASEH1 (ENSMMNG00015008036)	ENSMMNG00015008005	COLEC11 (ENSMMNG00015007976)	ENSMMNG00015007954	SOX11 (ENSMMNG00015007940)	RNF144A (ENSMMNG00015007925) #21	ID2 (ENSMMNG00015007903) #22	KIDINS220 (ENSMMNG00015007796) #23	MBOAT2 (ENSMMNG00015007697) #24	ASAP2 (ENSMMNG00015007585) #25	ITGB1BP1 (ENSMMNG00015007476) #26	CPSF3 (ENSMMNG00015007400) #27	IAH1 (ENSMMNG00015007332) #28	ADAM17 (ENSMMNG00015007247) #29	YWHAQ (ENSMMNG00015007193) #30	TAF1B (ENSMMNG00015007142) #31	GRHL1 (ENSMMNG00015007097) #32	KLF11 (ENSMMNG00015007075) #33	CYS1 (ENSMMNG00015007058) #34	ENSMMNG00015007031 #35	HPCAL1 (ENSMMNG00015007009) #36	ENSMMNG00015006983 #37
Vaquita	MODERN SPECIES	4	SNTG2 (ENSPSNG00000022070)	TPO (ENSPSNG00000022166)	PXDN (ENSPSNG00000022272)	MYT1L (ENSPSNG00000022330)	EIPR1 (ENSPSNG00000022392)	TRAPPC12 (ENSPSNG00000022403)	ENSPSNG00000022415	RNASEH1 (ENSPSNG00000022419)	ENSPSNG00000022424	COLEC11 (ENSPSNG00000022428)	DCDC2C (ENSPSNG00000022437)	SOX11 (ENSPSNG00000022450)	CMPK2 (ENSPSNG00000022458) #19	RSAD2 (ENSPSNG00000022461) #20	RNF144A (ENSPSNG00000022468) #21	ID2 (ENSPSNG00000022474) #22	KIDINS220 (ENSPSNG00000022485) #23	MBOAT2 (ENSPSNG00000022501) #24	ASAP2 (ENSPSNG00000022513) #25	ENSPSNG00000022534 #26	CPSF3 (ENSPSNG00000022538) #27	IAH1 (ENSPSNG00000022542) #28	ADAM17 (ENSPSNG00000022548) #29	YWHAQ (ENSPSNG00000022551) #30	TAF1B (ENSPSNG00000022554) #31	GRHL1 (ENSPSNG00000022556) #32	KLF11 (ENSPSNG00000022558) #33	CYS1 (ENSPSNG00000022560) #34	ENSPSNG00000022562 #35	HPCAL1 (ENSPSNG00000022565) #36	ENSPSNG00000022567 #37
Sperm whale	MODERN SPECIES	920																ID2 (ENSPCTG00005013744) #22
Blue whale	MODERN SPECIES	4	SNTG2 (ENSBMSG00010018157)	TPO (ENSBMSG00010017590)	PXDN (ENSBMSG00010015928)	MYT1L (ENSBMSG00010014263)	EIPR1 (ENSBMSG00010013997)	ENSBMSG00010013971	ENSBMSG00010013937	ENSBMSG00010013901	RNASEH1 (ENSBMSG00010013874)	RPS7 (ENSBMSG00010019975)	COLEC11 (ENSBMSG00010019717)	DCDC2C (ENSBMSG00010019611)	CMPK2 (ENSBMSG00010019458) #19	RSAD2 (ENSBMSG00010019426) #20	RNF144A (ENSBMSG00010019394) #21	ID2 (ENSBMSG00010019337) #22	KIDINS220 (ENSBMSG00010019274) #23	MBOAT2 (ENSBMSG00010019136) #24	ASAP2 (ENSBMSG00010019066) #25	ENSBMSG00010019013 #26	CPSF3 (ENSBMSG00010018925) #27	ENSBMSG00010018884 #28	ADAM17 (ENSBMSG00010018804) #29	YWHAQ (ENSBMSG00010018734) #30	ENSBMSG00010018704	TAF1B (ENSBMSG00010018671) #31	ENSBMSG00010018631 #32	ENSBMSG00010018599 #32	KLF11 (ENSBMSG00010018472) #33	CYS1 (ENSBMSG00010018428) #34	RRM2 (ENSBMSG00010018407) #35
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000162505	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.k #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Arabian camel	MODERN SPECIES	6	TMEM18 (ENSCDRG00005013178)	SNTG2 (ENSCDRG00005013218)	TPO (ENSCDRG00005013721)	PXDN (ENSCDRG00005013788)	ENSCDRG00005014272	ENSCDRG00005014339	EIPR1 (ENSCDRG00005014386)	TRAPPC12 (ENSCDRG00005014434)	ADI1 (ENSCDRG00005014498)	ENSCDRG00005014654	COLEC11 (ENSCDRG00005014714)	ALLC (ENSCDRG00005014851)	CMPK2 (ENSCDRG00005015247) #19	RSAD2 (ENSCDRG00005015263) #20	RNF144A (ENSCDRG00005015339) #21	ID2 (ENSCDRG00005015367) #22	KIDINS220 (ENSCDRG00005015440) #23	MBOAT2 (ENSCDRG00005016283) #24	ASAP2 (ENSCDRG00005016761) #25	ITGB1BP1 (ENSCDRG00005021375) #26	CPSF3 (ENSCDRG00005021386) #27	IAH1 (ENSCDRG00005021394) #28	ADAM17 (ENSCDRG00005021400) #29	YWHAQ (ENSCDRG00005021407) #30	ENSCDRG00005021412	TAF1B (ENSCDRG00005021414) #31	GRHL1 (ENSCDRG00005021421) #32	KLF11 (ENSCDRG00005021426) #33	RRM2 (ENSCDRG00005021436) #35	HPCAL1 (ENSCDRG00005021441) #36	ODC1 (ENSCDRG00005021445) #37
Suina	ANCESTRAL SPECIES	13	ENSGT00390000015191	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Chacoan peccary	MODERN SPECIES	775				MYT1L (ENSCWAG00000006348)	EIPR1 (ENSCWAG00000009008)	TRAPPC12 (ENSCWAG00000009065)	ADI1 (ENSCWAG00000009097)	RNASEH1 (ENSCWAG00000009165)	RPS7 (ENSCWAG00000009286)	COLEC11 (ENSCWAG00000009361)	DCDC2C (ENSCWAG00000009777)	SOX11 (ENSCWAG00000009865)	CMPK2 (ENSCWAG00000009912) #19	RSAD2 (ENSCWAG00000009959) #20	RNF144A (ENSCWAG00000010020) #21	ID2 (ENSCWAG00000010057) #22	KIDINS220 (ENSCWAG00000010112) #23	MBOAT2 (ENSCWAG00000010541) #24	ASAP2 (ENSCWAG00000010606) #25	ITGB1BP1 (ENSCWAG00000010974) #26	CPSF3 (ENSCWAG00000011057) #27	IAH1 (ENSCWAG00000011129) #28	ADAM17 (ENSCWAG00000011306) #29	YWHAQ (ENSCWAG00000011406) #30	TAF1B (ENSCWAG00000011471) #31	GRHL1 (ENSCWAG00000011623) #32	KLF11 (ENSCWAG00000011855) #33	CYS1 (ENSCWAG00000012002) #34	RRM2 (ENSCWAG00000012081) #35	HPCAL1 (ENSCWAG00000012123) #36	ODC1 (ENSCWAG00000012155) #37
Pig	MODERN SPECIES	11	TPO (ENSSSCG00000033193)	PXDN (ENSSSCG00000029570)	MYT1L (ENSSSCG00000029334)	EIPR1 (ENSSSCG00000028755)	TRAPPC12 (ENSSSCG00000024665)	ADI1 (ENSSSCG00000029161)	RNASEH1 (ENSSSCG00000025305)	ENSSSCG00000031088	COLEC11 (ENSSSCG00000025629)	DCDC2C (ENSSSCG00000008651)	SOX11 (ENSSSCG00000008649)	ENSSSCG00000047407	CMPK2 (ENSSSCG00000008647) #19	RSAD2 (ENSSSCG00000008648) #20	RNF144A (ENSSSCG00000008646) #21	ID2 (ENSSSCG00000008645) #22	KIDINS220 (ENSSSCG00000008644) #23	MBOAT2 (ENSSSCG00000023539) #24	ASAP2 (ENSSSCG00000008642) #25	ITGB1BP1 (ENSSSCG00000029313) #26	CPSF3 (ENSSSCG00000020799) #27	IAH1 (ENSSSCG00000008640) #28	ADAM17 (ENSSSCG00000008641) #29	YWHAQ (ENSSSCG00000008638) ##30	TAF1B (ENSSSCG00000008637) #31	GRHL1 (ENSSSCG00000026068) #32	KLF11 (ENSSSCG00000038643) #33	CYS1 (ENSSSCG00000040267) #34	ENSSSCG00000031741 #35	HPCAL1 (ENSSSCG00000003663) #36	ODC1 (ENSSSCG00000027121) #37
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Equus	ANCESTRAL SPECIES	7	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Horse	MODERN SPECIES	6	PXDN (ENSECAG00000019739)	MYT1L (ENSECAG00000014657)	EIPR1 (ENSECAG00000011270)	TRAPPC12 (ENSECAG00000005827)	ADI1 (ENSECAG00000054744)	RNASEH1 (ENSECAG00000020695)	RPS7 (ENSECAG00000020253)	COLEC11 (ENSECAG00000017488)	ALLC (ENSECAG00000014068)	ENSECAG00000013638	ENSECAG00000053393	SOX11 (ENSECAG00000037831)	CMPK2 (ENSECAG00000012773) #19	RSAD2 (ENSECAG00000010055) #20	RNF144A (ENSECAG00000009610) #21	ID2 (ENSECAG00000008738) #22	KIDINS220 (ENSECAG00000019263) #23	MBOAT2 (ENSECAG00000015922) #24	ENSECAG00000054846	ASAP2 (ENSECAG00000024278) #25	ITGB1BP1 (ENSECAG00000024193) #26	CPSF3 (ENSECAG00000019911) #27	IAH1 (ENSECAG00000018250) #28	ADAM17 (ENSECAG00000005760) #29	ENSECAG00000050309	YWHAQ (ENSECAG00000004925) ##30	TAF1B (ENSECAG00000023244) #31	GRHL1 (ENSECAG00000015969) #32	KLF11 (ENSECAG00000015820) #33	CYS1 (ENSECAG00000039359) #34	RRM2 (ENSECAG00000007464) #35
Donkey	MODERN SPECIES	26	TPO (ENSEASG00005022031)	PXDN (ENSEASG00005022055)	MYT1L (ENSEASG00005022125)	EIPR1 (ENSEASG00005022177)	TRAPPC12 (ENSEASG00005022184)	ADI1 (ENSEASG00005022195)	RNASEH1 (ENSEASG00005022200)	RPS7 (ENSEASG00005022205)	COLEC11 (ENSEASG00005037869)	ALLC (ENSEASG00005022214)	ENSEASG00005022219	ENSEASG00005035871	CMPK2 (ENSEASG00005022223) #19	RSAD2 (ENSEASG00005022224) #20	RNF144A (ENSEASG00005022228) #21	ID2 (ENSEASG00005000025) #22	KIDINS220 (ENSEASG00005000060) #23	MBOAT2 (ENSEASG00005000101) #24	ASAP2 (ENSEASG00005000562) #25	ITGB1BP1 (ENSEASG00005003969) #26	CPSF3 (ENSEASG00005003970) #27	ENSEASG00005026278 #28	ADAM17 (ENSEASG00005004001) #29	YWHAQ (ENSEASG00005004792) #30	TAF1B (ENSEASG00005004803) #31	GRHL1 (ENSEASG00005028173) #32	KLF11 (ENSEASG00005004881) #33	CYS1 (ENSEASG00005025190) #34	RRM2 (ENSEASG00005004892) #35	HPCAL1 (ENSEASG00005004903) #36	ENSEASG00005004910 #37
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Megabat	MODERN SPECIES	71																ID2 (ENSPVAG00000003912) #22	KIDINS220 (ENSPVAG00000003915) #23
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1720																ENSMLUG00000008563 #22	KIDINS220 (ENSMLUG00000008524) #23	MBOAT2 (ENSMLUG00000003545) #24	ENSMLUG00000030148
Microbat	MODERN SPECIES	873																ENSMLUG00000012800 #22
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	4	PXDN (ENSRFEG00010014968)	MYT1L (ENSRFEG00010011246)	EIPR1 (ENSRFEG00010011067)	TRAPPC12 (ENSRFEG00010011041)	ADI1 (ENSRFEG00010010993)	RNASEH1 (ENSRFEG00010010966)	RPS7 (ENSRFEG00010010903)	COLEC11 (ENSRFEG00010010705)	ALLC (ENSRFEG00010010543)	DCDC2C (ENSRFEG00010010389)	SOX11 (ENSRFEG00010010241)	ENSRFEG00010010195	CMPK2 (ENSRFEG00010010183) #19	RSAD2 (ENSRFEG00010010140) #20	RNF144A (ENSRFEG00010010097) #21	ENSRFEG00010010062 #22	KIDINS220 (ENSRFEG00010009917) #23	MBOAT2 (ENSRFEG00010009854) #24	ENSRFEG00010009833	ENSRFEG00010009824	ASAP2 (ENSRFEG00010009716) #25	ITGB1BP1 (ENSRFEG00010009640) #26	CPSF3 (ENSRFEG00010009573) #27	IAH1 (ENSRFEG00010009506) #28	ADAM17 (ENSRFEG00010009462) #29	YWHAQ (ENSRFEG00010009419) #30	TAF1B (ENSRFEG00010009242) #31	ENSRFEG00010009191	GRHL1 (ENSRFEG00010008922) #32	KLF11 (ENSRFEG00010008867) #33	CYS1 (ENSRFEG00010008838) #34
Greater horseshoe bat	MODERN SPECIES	16	PCDHB16 (ENSRFEG00010006048)	ENSRFEG00010006071	ENSRFEG00010006092	ENSRFEG00010006117	PCDHB15 (ENSRFEG00010006143)	ENSRFEG00010006171	SLC25A2 (ENSRFEG00010006191)	TAF7 (ENSRFEG00010006204)	PCDHGC3 (ENSRFEG00010006307)	ENSRFEG00010006496	DIAPH1 (ENSRFEG00010006574)	ENSRFEG00010006781	RELL2 (ENSRFEG00010006841)	FCHSD1 (ENSRFEG00010006953)	ARAP3 (ENSRFEG00010007170)	ENSRFEG00010007296 #22	PCDH1 (ENSRFEG00010007326)	DELE1 (ENSRFEG00010007416)	PCDH12 (ENSRFEG00010007543)	RNF14 (ENSRFEG00010007576)	GNPDA1 (ENSRFEG00010007628)	NDFIP1 (ENSRFEG00010007668)	SPRY4 (ENSRFEG00010007705)	FGF1 (ENSRFEG00010007768)	ARHGAP26 (ENSRFEG00010007845)	NR3C1 (ENSRFEG00010008132)	HMHB1 (ENSRFEG00010008275)	YIPF5 (ENSRFEG00010008320)	ENSRFEG00010008367	KCTD16 (ENSRFEG00010008389)	PRELID2 (ENSRFEG00010008426)
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Canidae	ANCESTRAL SPECIES	46	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j.f.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Dog	MODERN SPECIES	8	TPO (ENSCAFG00845017327)	PXDN (ENSCAFG00845017525)	MYT1L (ENSCAFG00845018747)	EIPR1 (ENSCAFG00845021194)	TRAPPC12 (ENSCAFG00845021304)	ADI1 (ENSCAFG00845021388)	RNASEH1 (ENSCAFG00845021474)	RPS7 (ENSCAFG00845021596)	COLEC11 (ENSCAFG00845021783)	ALLC (ENSCAFG00845021988)	DCDC2C (ENSCAFG00845022069)	SOX11 (ENSCAFG00845022195)	CMPK2 (ENSCAFG00845022277) #19	RSAD2 (ENSCAFG00845022316) #20	RNF144A (ENSCAFG00845022407) #21	ID2 (ENSCAFG00845022749) #22	KIDINS220 (ENSCAFG00845023013) #23	MBOAT2 (ENSCAFG00845023611) #24	ASAP2 (ENSCAFG00845023702) #25	ITGB1BP1 (ENSCAFG00845024064) #26	CPSF3 (ENSCAFG00845024218) #27	IAH1 (ENSCAFG00845024429) #28	ADAM17 (ENSCAFG00845024728) #29	YWHAQ (ENSCAFG00845025457) #30	TAF1B (ENSCAFG00845025510) #31	GRHL1 (ENSCAFG00845025614) #32	KLF11 (ENSCAFG00845025845) #33	CYS1 (ENSCAFG00845025907) #34	RRM2 (ENSCAFG00845025952) #35	HPCAL1 (ENSCAFG00845026130) #36	ODC1 (ENSCAFG00845026175) #37
Dingo	MODERN SPECIES	223	SNTG2 (ENSCAFG00020005251)	TPO (ENSCAFG00020005233)	PXDN (ENSCAFG00020005211)	MYT1L (ENSCAFG00020005084)	EIPR1 (ENSCAFG00020005053)	TRAPPC12 (ENSCAFG00020005019)	ADI1 (ENSCAFG00020005017)	RNASEH1 (ENSCAFG00020004994)	COLEC11 (ENSCAFG00020004967)	ALLC (ENSCAFG00020004959)	DCDC2C (ENSCAFG00020004927)	SOX11 (ENSCAFG00020004918)	ENSCAFG00020004906	RSAD2 (ENSCAFG00020004883) #20	RNF144A (ENSCAFG00020004868) #21	ID2 (ENSCAFG00020004823) #22	KIDINS220 (ENSCAFG00020002173) #23	MBOAT2 (ENSCAFG00020001936) #24	ASAP2 (ENSCAFG00020000377) #25	ITGB1BP1 (ENSCAFG00020000149) #26	CPSF3 (ENSCAFG00020026799) #27	IAH1 (ENSCAFG00020026797) #28	ENSCAFG00020026796 #29	YWHAQ (ENSCAFG00020026795) #30	TAF1B (ENSCAFG00020026787) #31	GRHL1 (ENSCAFG00020026767) #32	KLF11 (ENSCAFG00020026763) #33	CYS1 (ENSCAFG00020026758) #34	RRM2 (ENSCAFG00020026744) #35	HPCAL1 (ENSCAFG00020026737) #36	ODC1 (ENSCAFG00020026728) #37
Red fox	MODERN SPECIES	76	TPO (ENSVVUG00000008985)	PXDN (ENSVVUG00000008766)	ENSVVUG00000008727	EIPR1 (ENSVVUG00000008674)	TRAPPC12 (ENSVVUG00000008654)	ADI1 (ENSVVUG00000008646)	RNASEH1 (ENSVVUG00000008633)	RPS7 (ENSVVUG00000008628)	COLEC11 (ENSVVUG00000008618)	ALLC (ENSVVUG00000008603)	ENSVVUG00000008582	ENSVVUG00000008555	ENSVVUG00000008545	RSAD2 (ENSVVUG00000008530) #20	RNF144A (ENSVVUG00000008507) #21	ID2 (ENSVVUG00000008464) #22	KIDINS220 (ENSVVUG00000003457) #23	MBOAT2 (ENSVVUG00000002534) #24	ASAP2 (ENSVVUG00000002403) #25	ITGB1BP1 (ENSVVUG00000002216) #26	CPSF3 (ENSVVUG00000002194) #27	IAH1 (ENSVVUG00000002169) #28	ADAM17 (ENSVVUG00000002136) #29	YWHAQ (ENSVVUG00000002125) #30	TAF1B (ENSVVUG00000001641) #31	GRHL1 (ENSVVUG00000001610) #32	KLF11 (ENSVVUG00000001585) #33	RRM2 (ENSVVUG00000001484) #35	HPCAL1 (ENSVVUG00000001457) #36	ODC1 (ENSVVUG00000001437) #37	ENSVVUG00000001420
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000012138.a.a.j.s	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Ursus	ANCESTRAL SPECIES	125	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000012138.a.a.j.s.a	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Polar bear	MODERN SPECIES	89	SNTG2 (ENSUMAG00000004445)	ENSUMAG00000004436	PXDN (ENSUMAG00000004298)	MYT1L (ENSUMAG00000004239)	EIPR1 (ENSUMAG00000004220)	TRAPPC12 (ENSUMAG00000003998)	RNASEH1 (ENSUMAG00000003941)	RPS7 (ENSUMAG00000003937)	COLEC11 (ENSUMAG00000003933)	ALLC (ENSUMAG00000003926)	ENSUMAG00000003916	ENSUMAG00000003909	ENSUMAG00000003902	RSAD2 (ENSUMAG00000003893) #20	RNF144A (ENSUMAG00000003876) #21	ID2 (ENSUMAG00000003840) #22	KIDINS220 (ENSUMAG00000003833) #23	MBOAT2 (ENSUMAG00000003744) #24	ENSUMAG00000003713	ASAP2 (ENSUMAG00000003695) #25	ITGB1BP1 (ENSUMAG00000003689) #26	CPSF3 (ENSUMAG00000003676) #27	ENSUMAG00000003666 #28	ENSUMAG00000003662 #28	ADAM17 (ENSUMAG00000003653) #29	YWHAQ (ENSUMAG00000003646) #30	TAF1B (ENSUMAG00000003559) #31	GRHL1 (ENSUMAG00000003494) #32	KLF11 (ENSUMAG00000003481) #33	RRM2 (ENSUMAG00000003431) #35	HPCAL1 (ENSUMAG00000003415) #36
American black bear	MODERN SPECIES	6181																ID2 (ENSUAMG00000002504) #22
Giant Panda	MODERN SPECIES	14	SNTG2 (ENSAMEG00000009568)	TPO (ENSAMEG00000014666)	PXDN (ENSAMEG00000014718)	MYT1L (ENSAMEG00000014764)	EIPR1 (ENSAMEG00000014845)	TRAPPC12 (ENSAMEG00000018428)	ADI1 (ENSAMEG00000018432)	RNASEH1 (ENSAMEG00000018433)	RPS7 (ENSAMEG00000018435)	ALLC (ENSAMEG00000018438)	ENSAMEG00000026778	SOX11 (ENSAMEG00000013354)	CMPK2 (ENSAMEG00000013345) #19	RSAD2 (ENSAMEG00000013333) #20	RNF144A (ENSAMEG00000013324) #21	ID2 (ENSAMEG00000026711) #22	KIDINS220 (ENSAMEG00000008328) #23	MBOAT2 (ENSAMEG00000008373) #24	ENSAMEG00000024246	ASAP2 (ENSAMEG00000008406) #25	ITGB1BP1 (ENSAMEG00000008478) #26	CPSF3 (ENSAMEG00000008493) #27	IAH1 (ENSAMEG00000008545) #28	ADAM17 (ENSAMEG00000008569) #29	YWHAQ (ENSAMEG00000008618) #30	TAF1B (ENSAMEG00000011301) #31	GRHL1 (ENSAMEG00000011320) #32	KLF11 (ENSAMEG00000011355) #33	RRM2 (ENSAMEG00000011372) #35	HPCAL1 (ENSAMEG00000029791) #36	ODC1 (ENSAMEG00000011415) #37
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00990000204082	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Ferret	MODERN SPECIES	178	RNASEH1 (ENSMPUG00000012984)	ENSMPUG00000013003	COLEC11 (ENSMPUG00000013013)	ALLC (ENSMPUG00000013055)	DCDC2C (ENSMPUG00000013104)	ENSMPUG00000013120	ENSMPUG00000019478	ENSMPUG00000013122	ENSMPUG00000013127	ENSMPUG00000019479	CMPK2 (ENSMPUG00000013134) #19	RSAD2 (ENSMPUG00000013146) #20	RNF144A (ENSMPUG00000013154) #21	ENSMPUG00000013172	ENSMPUG00000013173	ID2 (ENSMPUG00000013178) #22	KIDINS220 (ENSMPUG00000013181) #23	MBOAT2 (ENSMPUG00000013191) #24	ASAP2 (ENSMPUG00000013197) #25	ITGB1BP1 (ENSMPUG00000013210) #26	CPSF3 (ENSMPUG00000013213) #27	IAH1 (ENSMPUG00000013218) #28	ADAM17 (ENSMPUG00000013236) #29	ENSMPUG00000013249	YWHAQ (ENSMPUG00000013252) #30	TAF1B (ENSMPUG00000013256) #31	GRHL1 (ENSMPUG00000013263) #32	ENSMPUG00000013277	ENSMPUG00000013281	KLF11 (ENSMPUG00000013287) #33	RRM2 (ENSMPUG00000013295) #35
American mink	MODERN SPECIES	7	ENSNVIG00000017354	PXDN (ENSNVIG00000016909)	MYT1L (ENSNVIG00000016023)	EIPR1 (ENSNVIG00000015985)	TRAPPC12 (ENSNVIG00000015971)	ADI1 (ENSNVIG00000015966)	RNASEH1 (ENSNVIG00000015913)	ENSNVIG00000015884	COLEC11 (ENSNVIG00000015826)	ALLC (ENSNVIG00000015809)	DCDC2C (ENSNVIG00000015778)	SOX11 (ENSNVIG00000015756)	ENSNVIG00000015750	RSAD2 (ENSNVIG00000015718) #20	R144A (ENSNVIG00000015685) #21	ID2 (ENSNVIG00000015663) #22	KIDINS220 (ENSNVIG00000015535) #23	MBOAT2 (ENSNVIG00000015525) #24	ASAP2 (ENSNVIG00000015416) #25	ITGB1BP1 (ENSNVIG00000015345) #26	CPSF3 (ENSNVIG00000015301) #27	IAH1 (ENSNVIG00000015262) #28	ADAM17 (ENSNVIG00000015197) #29	YWHAQ (ENSNVIG00000015162) #30	TAF1B (ENSNVIG00000015127) #31	GRHL1 (ENSNVIG00000015046) #32	KLF11 (ENSNVIG00000015016) #33	RRM2 (ENSNVIG00000014985) #35	ENSNVIG00000014964	DCOR (ENSNVIG00000014941) #37	NOL10 (ENSNVIG00000014778)
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Cat	MODERN SPECIES	2	TPO (ENSFCAG00000002875)	PXDN (ENSFCAG00000008327)	MYT1L (ENSFCAG00000045313)	EIPR1 (ENSFCAG00000008983)	TRAPPC12 (ENSFCAG00000024779)	ADI1 (ENSFCAG00000025763)	RNASEH1 (ENSFCAG00000025832)	RPS7 (ENSFCAG00000023243)	COLEC11 (ENSFCAG00000031800)	ALLC (ENSFCAG00000007504)	DCDC2C (ENSFCAG00000044946)	SOX11 (ENSFCAG00000039092)	CMPK2 (ENSFCAG00000022513) #19	RSAD2 (ENSFCAG00000035139) #20	RNF144A (ENSFCAG00000000709) #21	ID2 (ENSFCAG00000026937) #22	KIDINS220 (ENSFCAG00000029422) #23	MBOAT2 (ENSFCAG00000027684) #24	ASAP2 (ENSFCAG00000007850) #25	ITGB1BP1 (ENSFCAG00000034320) #26	CPSF3 (ENSFCAG00000007852) #27	IAH1 (ENSFCAG00000023291) #28	ADAM17 (ENSFCAG00000007853) #29	YWHAQ (ENSFCAG00000007854) ##30	TAF1B (ENSFCAG00000007855) #31	GRHL1 (ENSFCAG00000007856) #32	KLF11 (ENSFCAG00000030965) #33	CYS1 (ENSFCAG00000045113) #34	RRM2 (ENSFCAG00000003942) #35	HPCAL1 (ENSFCAG00000009252) #36	ODC1 (ENSFCAG00000027500) #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Tiger	MODERN SPECIES	581						EIPR1 (ENSPTIG00000018777)	ENSPTIG00000018854	ADI1 (ENSPTIG00000019002)	RNASEH1 (ENSPTIG00000019034)	RPS7 (ENSPTIG00000019474)	ALLC (ENSPTIG00000019525)	DCDC2C (ENSPTIG00000019551)	ENSPTIG00000019591	RSAD2 (ENSPTIG00000019625) #20	RNF144A (ENSPTIG00000019714) #21	ID2 (ENSPTIG00000019724) #22	KIDINS220 (ENSPTIG00000019843) #23	MBOAT2 (ENSPTIG00000020033) #24	ASAP2 (ENSPTIG00000000985) #25	ITGB1BP1 (ENSPTIG00000002156) #26	CPSF3 (ENSPTIG00000003920) #27	IAH1 (ENSPTIG00000005299) #28	ADAM17 (ENSPTIG00000005404) #29	YWHAQ (ENSPTIG00000006178) #30	TAF1B (ENSPTIG00000006228) #31	GRHL1 (ENSPTIG00000007003) #32	KLF11 (ENSPTIG00000007061) #33	RRM2 (ENSPTIG00000007390) #35	ODC1 (ENSPTIG00000007491) #37
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
lion	MODERN SPECIES	3	TMEM18 (ENSPLOG00000000784)	SNTG2 (ENSPLOG00000000838)	TPO (ENSPLOG00000000892)	PXDN (ENSPLOG00000000940)	MYT1L (ENSPLOG00000001290)	EIPR1 (ENSPLOG00000001791)	ENSPLOG00000001824	TRAPPC12 (ENSPLOG00000001834)	RNASEH1 (ENSPLOG00000001905)	RPS7 (ENSPLOG00000001995)	COLEC11 (ENSPLOG00000002030)	ALLC (ENSPLOG00000002071)	CMPK2 (ENSPLOG00000002115) #19	RSAD2 (ENSPLOG00000002128) #20	RNF144A (ENSPLOG00000002146) #21	ID2 (ENSPLOG00000002192) #22	KIDINS220 (ENSPLOG00000002235) #23	MBOAT2 (ENSPLOG00000002421) #24	ASAP2 (ENSPLOG00000002531) #25	ITGB1BP1 (ENSPLOG00000002692) #26	CPSF3 (ENSPLOG00000002732) #27	IAH1 (ENSPLOG00000002790) #28	ADAM17 (ENSPLOG00000002823) #29	YWHAQ (ENSPLOG00000002873) #30	ENSPLOG00000002895	TAF1B (ENSPLOG00000002921) #31	GRHL1 (ENSPLOG00000002984) #32	KLF11 (ENSPLOG00000003042) #33	CYS1 (ENSPLOG00000003056) #34	RRM2 (ENSPLOG00000003069) #35	HPCAL1 (ENSPLOG00000003090) #36
leopard	DUPLICATION
leopard	MODERN SPECIES						EIPR1 (ENSPPRG00000015372)	ENSPPRG00000015440	ADI1 (ENSPPRG00000015485)	RNASEH1 (ENSPPRG00000015513)	RPS7 (ENSPPRG00000015564)	COLEC11 (ENSPPRG00000015594)	ALLC (ENSPPRG00000015621)	DCDC2C (ENSPPRG00000015663)	CMPK2 (ENSPPRG00000015716) #19	RSAD2 (ENSPPRG00000015738) #20	RNF144A (ENSPPRG00000015759) #21	ENSPPRG00000015776 #22	ID2 (ENSPPRG00000015804) #22	KIDINS220 (ENSPPRG00000016171) #23	MBOAT2 (ENSPPRG00000016261) #24	ASAP2 (ENSPPRG00000016539) #25	ITGB1BP1 (ENSPPRG00000016726) #26	CPSF3 (ENSPPRG00000016790) #27	IAH1 (ENSPPRG00000016876) #28	ADAM17 (ENSPPRG00000016991) #29	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #30	TAF1B (ENSPPRG00000017125) #31	GRHL1 (ENSPPRG00000017279) #32	KLF11 (ENSPPRG00000017354) #33	RRM2 (ENSPPRG00000017387) #35	ENSPPRG00000017433 #36
leopard	MODERN SPECIES					EIPR1 (ENSPPRG00000015372)	ENSPPRG00000015440	ADI1 (ENSPPRG00000015485)	RNASEH1 (ENSPPRG00000015513)	RPS7 (ENSPPRG00000015564)	COLEC11 (ENSPPRG00000015594)	ALLC (ENSPPRG00000015621)	DCDC2C (ENSPPRG00000015663)	CMPK2 (ENSPPRG00000015716) #19	RSAD2 (ENSPPRG00000015738) #20	RNF144A (ENSPPRG00000015759) #21	ENSPPRG00000015776 #22	ID2 (ENSPPRG00000015804) #22	KIDINS220 (ENSPPRG00000016171) #23	MBOAT2 (ENSPPRG00000016261) #24	ASAP2 (ENSPPRG00000016539) #25	ITGB1BP1 (ENSPPRG00000016726) #26	CPSF3 (ENSPPRG00000016790) #27	IAH1 (ENSPPRG00000016876) #28	ADAM17 (ENSPPRG00000016991) #29	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #30	TAF1B (ENSPPRG00000017125) #31	GRHL1 (ENSPPRG00000017279) #32	KLF11 (ENSPPRG00000017354) #33	RRM2 (ENSPPRG00000017387) #35	ENSPPRG00000017433 #36	HPCAL1 (ENSPPRG00000017486) #36
Eulipotyphla	ANCESTRAL SPECIES	583																ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24
Hedgehog	MODERN SPECIES	11693																ID2 (ENSEEUG00000007814) #22
Common shrew	MODERN SPECIES	1210																ID2 (ENSSARG00000003385) #22	KIDINS220 (ENSSARG00000003395) #23	MBOAT2 (ENSSARG00000003492) #24
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Tree shrew	MODERN SPECIES	7495																ID2 (ENSTBEG00000012464) #22
Glires	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000156464 #22
Rabbit	MODERN SPECIES	768																ID2 (ENSOCUG00000024446) #22
Pika	MODERN SPECIES	8374																ID2 (ENSOPRG00000003784) #22
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982.b #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v.b #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069.k.a #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982.b #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v.b #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Alpin marmot	MODERN SPECIES	6	MYT1L (ENSMMMG00000022919)	EIPR1 (ENSMMMG00000022897)	TRAPPC12 (ENSMMMG00000022884)	ADI1 (ENSMMMG00000022876)	RNASEH1 (ENSMMMG00000022864)	ENSMMMG00000022860	RPS7 (ENSMMMG00000022853)	COLEC11 (ENSMMMG00000022843)	ALLC (ENSMMMG00000022836)	DCDC2C (ENSMMMG00000022831)	ENSMMMG00000022822	SOX11 (ENSMMMG00000022819)	CMPK2 (ENSMMMG00000022812) #19	RSAD2 (ENSMMMG00000022810) #20	RNF144A (ENSMMMG00000022809) #21	ID2 (ENSMMMG00000022803) #22	KIDINS220 (ENSMMMG00000022748) #23	MBOAT2 (ENSMMMG00000022735) #24	ASAP2 (ENSMMMG00000022671) #25	ITGB1BP1 (ENSMMMG00000022669) #26	CPSF3 (ENSMMMG00000022663) #27	IAH1 (ENSMMMG00000022658) #28	ADAM17 (ENSMMMG00000022654) #29	YWHAQ (ENSMMMG00000022652) #30	TAF1B (ENSMMMG00000022638) #31	GRHL1 (ENSMMMG00000022631) #32	KLF11 (ENSMMMG00000022629) #33	ENSMMMG00000022625 #34	ENSMMMG00000022624 #35	HPCAL1 (ENSMMMG00000022618) #36	ODC1 (ENSMMMG00000022615) #37
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069.k.a #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.b ##30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982.b #33	ENSGT00390000013305.a.a.v.b #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Arctic ground squirrel	MODERN SPECIES													SOX11 (ENSUPAG00010012315)	CMPK2 (ENSUPAG00010012310) #19	RSAD2 (ENSUPAG00010012305) #20	RNF144A (ENSUPAG00010012263) #21	ID2 (ENSUPAG00010012253) #22	KIDINS220 (ENSUPAG00010012028) #23	MBOAT2 (ENSUPAG00010011957) #24	ASAP2 (ENSUPAG00010011650) #25	ITGB1BP1 (ENSUPAG00010011629) #26	CPSF3 (ENSUPAG00010011610) #27	ENSUPAG00010011577 #28	ADAM17 (ENSUPAG00010011539) #29	YWHAQ (ENSUPAG00010011534) ##30	TAF1B (ENSUPAG00010011508) #31	GRHL1 (ENSUPAG00010011483) #32	KLF11 (ENSUPAG00010011457) #33	CYS1 (ENSUPAG00010011444) #34	HPCAL1 (ENSUPAG00010011428) #36	ODC1 (ENSUPAG00010011416) #37	NOL10 (ENSUPAG00010011386)
Squirrel	MODERN SPECIES	132	TMEM18 (ENSSTOG00000027494)	TPO (ENSSTOG00000012111)	PXDN (ENSSTOG00000020472)	MYT1L (ENSSTOG00000001345)	EIPR1 (ENSSTOG00000006844)	TRAPPC12 (ENSSTOG00000027157)	ADI1 (ENSSTOG00000029152)	RNASEH1 (ENSSTOG00000012774)	RPS7 (ENSSTOG00000024830)	COLEC11 (ENSSTOG00000020387)	ALLC (ENSSTOG00000002136)	DCDC2C (ENSSTOG00000020234)	CMPK2 (ENSSTOG00000019402) #19	RSAD2 (ENSSTOG00000006147) #20	RNF144A (ENSSTOG00000027570) #21	ID2 (ENSSTOG00000019401) #22	KIDINS220 (ENSSTOG00000013232) #23	MBOAT2 (ENSSTOG00000020147) #24	ASAP2 (ENSSTOG00000004398) #25	ITGB1BP1 (ENSSTOG00000004464) #26	CPSF3 (ENSSTOG00000004476) #27	ENSSTOG00000004500 #28	ADAM17 (ENSSTOG00000004510) #29	ENSSTOG00000024378 ##30	TAF1B (ENSSTOG00000002419) #31	GRHL1 (ENSSTOG00000019842) #32	ENSSTOG00000030936 #33	ENSSTOG00000033669 #35	HPCAL1 (ENSSTOG00000001514) #36	ENSSTOG00000000386 #37	NOL10 (ENSSTOG00000005485)
Eurasian red squirrel	MODERN SPECIES	5	TPO (ENSSVLG00005023497)	PXDN (ENSSVLG00005023400)	MYT1L (ENSSVLG00005022260)	EIPR1 (ENSSVLG00005022022)	TRAPPC12 (ENSSVLG00005021823)	ADI1 (ENSSVLG00005021776)	RNASEH1 (ENSSVLG00005021750)	ENSSVLG00005021713	COLEC11 (ENSSVLG00005021395)	ALLC (ENSSVLG00005021266)	DCDC2C (ENSSVLG00005021143)	SOX11 (ENSSVLG00005021089)	CMPK2 (ENSSVLG00005020981) #19	RSAD2 (ENSSVLG00005020911) #20	RNF144A (ENSSVLG00005020868) #21	ID2 (ENSSVLG00005020830) #22	KIDINS220 (ENSSVLG00005020790) #23	MBOAT2 (ENSSVLG00005020748) #24	ASAP2 (ENSSVLG00005020310) #25	ITGB1BP1 (ENSSVLG00005020179) #26	CPSF3 (ENSSVLG00005020098) #27	IAH1 (ENSSVLG00005019997) #28	ADAM17 (ENSSVLG00005019936) #29	YWHAQ (ENSSVLG00005019899) #30	ENSSVLG00005019881	ENSSVLG00005019695 #31	ENSSVLG00005019438 #32	KLF11 (ENSSVLG00005019337) #33	CYS1 (ENSSVLG00005019295) #34	ENSSVLG00005019233 #35	HPCAL1 (ENSSVLG00005019176) #36
Hystricomorpha	ANCESTRAL SPECIES	70		ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Hystricomorpha_a	ANCESTRAL SPECIES	70	ENSGT00940000155623 #25	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Guinea pig	MODERN SPECIES	75	ASAP2 (ENSCPOG00000010278) #25	PXDN (ENSCPOG00000011199)	MYT1L (ENSCPOG00000013246)	EIPR1 (ENSCPOG00000005737)	TRAPPC12 (ENSCPOG00000005749)	ADI1 (ENSCPOG00000027219)	RNASEH1 (ENSCPOG00000022278)	RPS7 (ENSCPOG00000009795)	COLEC11 (ENSCPOG00000032858)	ALLC (ENSCPOG00000014255)	ENSCPOG00000022309	SOX11 (ENSCPOG00000019507)	CMPK2 (ENSCPOG00000001105) #19	RSAD2 (ENSCPOG00000008107) #20	RNF144A (ENSCPOG00000030215) #21	ID2 (ENSCPOG00000020620) #22	KIDINS220 (ENSCPOG00000022029) #23	MBOAT2 (ENSCPOG00000002635) #24	ENSCPOG00000036667	ENSCPOG00000038838	TMEM18 (ENSCPOG00000012522)	ALKAL2 (ENSCPOG00000001501)	ENSCPOG00000002862	SH3YL1 (ENSCPOG00000020224)	ENSCPOG00000033594	ENSCPOG00000015266	ENSCPOG00000011233	ENSCPOG00000026998	ENSCPOG00000035319	ENSCPOG00000024700	ENSCPOG00000030164
Hystricomorpha_b	ANCESTRAL SPECIES	91	ENSGT00940000155623 #25	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00390000015191	ENSGT00940000162505	ENSGT00940000158351.u	ENSGT00510000048137
Long-tailed chinchilla	MODERN SPECIES	194	PXDN (ENSCLAG00000001727)	MYT1L (ENSCLAG00000001644)	ENSCLAG00000001592	EIPR1 (ENSCLAG00000002535)	TRAPPC12 (ENSCLAG00000002486)	ADI1 (ENSCLAG00000002464)	RNASEH1 (ENSCLAG00000002440)	RPS7 (ENSCLAG00000002424)	COLEC11 (ENSCLAG00000002289)	ALLC (ENSCLAG00000002247)	DCDC2C (ENSCLAG00000002204)	SOX11 (ENSCLAG00000002180)	CMPK2 (ENSCLAG00000002165) #19	RSAD2 (ENSCLAG00000002145) #20	RNF144A (ENSCLAG00000002032) #21	ID2 (ENSCLAG00000001869) #22	KIDINS220 (ENSCLAG00000001859) #23	MBOAT2 (ENSCLAG00000001827) #24	SNTG2 (ENSCLAG00000001745)	TPO (ENSCLAG00000001674)	TMEM18 (ENSCLAG00000001654)	ALKAL2 (ENSCLAG00000001643)	ACP1 (ENSCLAG00000001589)	SH3YL1 (ENSCLAG00000001563)	ENSCLAG00000001535
Degu	MODERN SPECIES	245										ENSODEG00000018607	ENSODEG00000000593	SOX11 (ENSODEG00000000568)	CMPK2 (ENSODEG00000000539) #19	RSAD2 (ENSODEG00000000506) #20	RNF144A (ENSODEG00000000489) #21	ID2 (ENSODEG00000000480) #22	KIDINS220 (ENSODEG00000000415) #23	MBOAT2 (ENSODEG00000000353) #24	SNTG2 (ENSODEG00000000324)	TPO (ENSODEG00000000292)	TMEM18 (ENSODEG00000000266)	ALKAL2 (ENSODEG00000000931)	ACP1 (ENSODEG00000000890)	ENSODEG00000000841	ENSODEG00000018660
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000003520	MYT1L (ENSHGLG00000003552)	EIPR1 (ENSHGLG00000007917)	TRAPPC12 (ENSHGLG00000019579)	Adi1 (ENSHGLG00000044763)	RNASEH1 (ENSHGLG00000043933)	Rps7 (ENSHGLG00000002534)	COLEC11 (ENSHGLG00000002302)	ENSHGLG00000002847	ENSHGLG00000004440	SOX11 (ENSHGLG00000036486)	CMPK2 (ENSHGLG00000000515) #19	RSAD2 (ENSHGLG00000000447) #20	RNF144A (ENSHGLG00000000432) #21	ENSHGLG00000048074	ID2 (ENSHGLG00000039879) #22	KIDINS220 (ENSHGLG00000000883) #23	ENSHGLG00000000976 #24	ENSHGLG00000001990	ENSHGLG00000001538	ENSHGLG00000001358	ENSHGLG00000001190	ENSHGLG00000045756	ENSHGLG00000001117	ENSHGLG00000001267	ENSHGLG00000048658	ENSHGLG00000041553	ENSHGLG00000037695	ENSHGLG00000045838	ENSHGLG00000032400	ENSHGLG00000035188
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000013305.a.a.v #35	ENSGT00390000016845 #34	ENSGT00940000155982 #33	ENSGT00940000157612 #32	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00940000155443 #29	ENSGT00390000008069 #28	ENSGT00940000155699 #27	ENSGT00390000003990 #26	ENSGT00940000155623 #25	ENSGT01060000248676	ENSGT00940000154645.A #36
Rat	MODERN SPECIES	16	Eipr1 (ENSRNOG00000009285)	Trappc12 (ENSRNOG00000009039)	Adi1 (ENSRNOG00000008950)	Rnaseh1 (ENSRNOG00000008584)	Rps7 (ENSRNOG00000008373)	Allc (ENSRNOG00000008299)	Akr1b1-ps1 (ENSRNOG00000042697)	ENSRNOG00000070424	Dcdc2c (ENSRNOG00000067604)	ENSRNOG00000069562	ENSRNOG00000068283	Sox11 (ENSRNOG00000030034)	Cmpk2 (ENSRNOG00000007690) #19	Rsad2 (ENSRNOG00000007539) #20	Rnf144a (ENSRNOG00000007370) #21	Id2 (ENSRNOG00000007237) #22	LOC120093241 (ENSRNOG00000062523)	Kidins220 (ENSRNOG00000023176) #23	Mboat2 (ENSRNOG00000061050) #24	Rrm2 (ENSRNOG00000054286) #35	Cys1 (ENSRNOG00000058891) #34	Klf11 (ENSRNOG00000054259) #33	Grhl1 (ENSRNOG00000054989) #32	Rbm34-ps1 (ENSRNOG00000065550)	Taf1b (ENSRNOG00000061415) #31	Ywhaq (ENSRNOG00000051650) #30	Adam17 (ENSRNOG00000060694) #29	Iah1 (ENSRNOG00000060853) #28	Cpsf3 (ENSRNOG00000052418) #27	Itgb1bp1 (ENSRNOG00000059402) #26	Asap2 (ENSRNOG00000061519) #25
Mus	ANCESTRAL SPECIES	10	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000013305.a.a.v #35	ENSGT00390000016845 #34	ENSGT00940000155982 #33	ENSGT00940000157612 #32	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00940000155443 #29	ENSGT00390000008069 #28	ENSGT00940000155699 #27	ENSGT00390000003990 #26	ENSGT00940000155623 #25	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a #37
Shrew mouse	MODERN SPECIES	20	Tpo (MGP_PahariEiJ_G0029424)	Pxdn (MGP_PahariEiJ_G0029423)	Myt1l (MGP_PahariEiJ_G0029422)	Eipr1 (MGP_PahariEiJ_G0029421)	Trappc12 (MGP_PahariEiJ_G0029420)	Adi1 (MGP_PahariEiJ_G0029419)	Rnaseh1 (MGP_PahariEiJ_G0029418)	MGP_PahariEiJ_G0029417	Colec11 (MGP_PahariEiJ_G0029416)	Allc (MGP_PahariEiJ_G0029415)	MGP_PahariEiJ_G0029414	Sox11 (MGP_PahariEiJ_G0029413)	Cmpk2 (MGP_PahariEiJ_G0029412) #19	Rsad2 (MGP_PahariEiJ_G0029411) #20	Rnf144a (MGP_PahariEiJ_G0029410) #21	MGP_PahariEiJ_G0029409 #22	Kidins220 (MGP_PahariEiJ_G0029408) #23	Mboat2 (MGP_PahariEiJ_G0029407) #24	MGP_PahariEiJ_G0029405 #35	Cys1 (MGP_PahariEiJ_G0029404) #34	Klf11 (MGP_PahariEiJ_G0029403) #33	MGP_PahariEiJ_G0029402 #32	MGP_PahariEiJ_G0029401 #31	MGP_PahariEiJ_G0029400 #30	Adam17 (MGP_PahariEiJ_G0029399) #29	Iah1 (MGP_PahariEiJ_G0029398) #28	Cpsf3 (MGP_PahariEiJ_G0029397) #27	Itgb1bp1 (MGP_PahariEiJ_G0029396) #26	Asap2 (MGP_PahariEiJ_G0029395) #25	Odc1 (MGP_PahariEiJ_G0029394) #37	Nol10 (MGP_PahariEiJ_G0029393)
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000013305.a.a.v #35	ENSGT00390000016845 #34	ENSGT00940000155982 #33	ENSGT00940000157612 #32	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00940000155443 #29	ENSGT00390000008069 #28	ENSGT00940000155699 #27	ENSGT00390000003990 #26	ENSGT00940000155623 #25	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a.e #37
Ryukyu mouse	MODERN SPECIES	3	Tpo (MGP_CAROLIEiJ_G0017666)	Pxdn (MGP_CAROLIEiJ_G0017665)	Myt1l (MGP_CAROLIEiJ_G0017664)	Eipr1 (MGP_CAROLIEiJ_G0017663)	Trappc12 (MGP_CAROLIEiJ_G0017662)	Adi1 (MGP_CAROLIEiJ_G0017661)	Rnaseh1 (MGP_CAROLIEiJ_G0017660)	Rps7 (MGP_CAROLIEiJ_G0017659)	Colec11 (MGP_CAROLIEiJ_G0017658)	Allc (MGP_CAROLIEiJ_G0017657)	MGP_CAROLIEiJ_G0017656	Sox11 (MGP_CAROLIEiJ_G0017655)	Cmpk2 (MGP_CAROLIEiJ_G0017654) #19	Rsad2 (MGP_CAROLIEiJ_G0017653) #20	Rnf144a (MGP_CAROLIEiJ_G0017652) #21	MGP_CAROLIEiJ_G0017651 #22	Kidins220 (MGP_CAROLIEiJ_G0017650) #23	Mboat2 (MGP_CAROLIEiJ_G0017649) #24	Rrm2 (MGP_CAROLIEiJ_G0017648) #35	Cys1 (MGP_CAROLIEiJ_G0017647) #34	Klf11 (MGP_CAROLIEiJ_G0017646) #33	Grhl1 (MGP_CAROLIEiJ_G0017645) #32	Taf1b (MGP_CAROLIEiJ_G0017644) #31	Ywhaq (MGP_CAROLIEiJ_G0017643) #30	Adam17 (MGP_CAROLIEiJ_G0017642) #29	Iah1 (MGP_CAROLIEiJ_G0017641) #28	Cpsf3 (MGP_CAROLIEiJ_G0017640) #27	Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #26	Asap2 (MGP_CAROLIEiJ_G0017638) #25	Odc1 (MGP_CAROLIEiJ_G0017637) #37	Nol10 (MGP_CAROLIEiJ_G0017636)
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000013305.a.a.v #35	ENSGT00390000016845 #34	ENSGT00940000155982 #33	ENSGT00940000157612 #32	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00940000155443 #29	ENSGT00390000008069 #28	ENSGT00940000155699 #27	ENSGT00390000003990 #26	ENSGT00940000155623 #25	ENSGT01060000248676	ENSGT00940000154645.A #36
Mouse	MODERN SPECIES	3	Tpo (ENSMUSG00000020673)	Pxdn (ENSMUSG00000020674)	Myt1l (ENSMUSG00000061911)	Eipr1 (ENSMUSG00000036613)	Trappc12 (ENSMUSG00000020628)	Adi1 (ENSMUSG00000020629)	Rnaseh1 (ENSMUSG00000020630)	Rps7 (ENSMUSG00000061477)	Colec11 (ENSMUSG00000036655)	Allc (ENSMUSG00000020636)	Dcdc2c (ENSMUSG00000020633)	Sox11 (ENSMUSG00000063632)	Cmpk2 (ENSMUSG00000020638) #19	Rsad2 (ENSMUSG00000020641) #20	Rnf144a (ENSMUSG00000020642) #21	Id2 (ENSMUSG00000020644) #22	Kidins220 (ENSMUSG00000036333) #23	Mboat2 (ENSMUSG00000020646) #24	Rrm2 (ENSMUSG00000020649) #35	Cys1 (ENSMUSG00000062563) #34	Klf11 (ENSMUSG00000020653) #33	Grhl1 (ENSMUSG00000020656) #32	Taf1b (ENSMUSG00000059669) #31	9030624G23Rik (ENSMUSG00000073158)	Ywhaq (ENSMUSG00000076432) #30	Adam17 (ENSMUSG00000052593) #29	Iah1 (ENSMUSG00000062054) #28	Cpsf3 (ENSMUSG00000054309) #27	Itgb1bp1 (ENSMUSG00000062352) #26	Asap2 (ENSMUSG00000052632) #25	Gm21863 (ENSMUSG00000095470)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000013305.a.a.v #35	ENSGT00390000016845 #34	ENSGT00940000155982 #33	ENSGT00940000157612 #32	ENSGT00440000033827 #31	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00940000155443 #29	ENSGT00390000008069 #28	ENSGT00940000155699 #27	ENSGT00390000003990 #26	ENSGT00940000155623 #25	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.e #37
Steppe mouse	MODERN SPECIES	56										ENSMSIG00000025619	ENSMSIG00000025668	Rsad2 (ENSMSIG00000025674) #20	Rnf144a (ENSMSIG00000025691) #21	ENSMSIG00000025745	ENSMSIG00000025755	ENSMSIG00000025759 #22	Kidins220 (ENSMSIG00000025770) #23	Mboat2 (ENSMSIG00000025871) #24	Rrm2 (ENSMSIG00000025915) #35	ENSMSIG00000025932	Klf11 (ENSMSIG00000025936) #33	Grhl1 (ENSMSIG00000025943) #32	Taf1b (ENSMSIG00000026008) #31
spretus	MODERN SPECIES	3	Tpo (MGP_SPRETEiJ_G0018508)	Pxdn (MGP_SPRETEiJ_G0018507)	Myt1l (MGP_SPRETEiJ_G0018506)	Eipr1 (MGP_SPRETEiJ_G0018505)	Trappc12 (MGP_SPRETEiJ_G0018504)	Adi1 (MGP_SPRETEiJ_G0018503)	Rnaseh1 (MGP_SPRETEiJ_G0018502)	MGP_SPRETEiJ_G0018501	Colec11 (MGP_SPRETEiJ_G0018500)	Allc (MGP_SPRETEiJ_G0018499)	MGP_SPRETEiJ_G0018498	Sox11 (MGP_SPRETEiJ_G0018497)	Cmpk2 (MGP_SPRETEiJ_G0018496) #19	Rsad2 (MGP_SPRETEiJ_G0018495) #20	Rnf144a (MGP_SPRETEiJ_G0018494) #21	MGP_SPRETEiJ_G0018493 #22	Kidins220 (MGP_SPRETEiJ_G0018492) #23	Mboat2 (MGP_SPRETEiJ_G0018491) #24	Rrm2 (MGP_SPRETEiJ_G0018490) #35	Cys1 (MGP_SPRETEiJ_G0018489) #34	Klf11 (MGP_SPRETEiJ_G0018488) #33	Grhl1 (MGP_SPRETEiJ_G0018487) #32	MGP_SPRETEiJ_G0018486	Taf1b (MGP_SPRETEiJ_G0018485) #31	Ywhaq (MGP_SPRETEiJ_G0018484) #30	Adam17 (MGP_SPRETEiJ_G0018483) #29	Iah1 (MGP_SPRETEiJ_G0018482) #28	Cpsf3 (MGP_SPRETEiJ_G0018481) #27	Itgb1bp1 (MGP_SPRETEiJ_G0018480) #26	Asap2 (MGP_SPRETEiJ_G0018479) #25	Nol10 (MGP_SPRETEiJ_G0018478)
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a.g #37
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	737	Tpo (ENSMAUG00000001044)	Pxdn (ENSMAUG00000010293)	Myt1l (ENSMAUG00000011990)	Eipr1 (ENSMAUG00000014834)	Trappc12 (ENSMAUG00000012942)	Adi1 (ENSMAUG00000017657)	Rnaseh1 (ENSMAUG00000014957)	Rps7 (ENSMAUG00000012178)	Colec11 (ENSMAUG00000012547)	Allc (ENSMAUG00000015102)	ENSMAUG00000010849	Sox11 (ENSMAUG00000016656)	Cmpk2 (ENSMAUG00000017501) #19	Rsad2 (ENSMAUG00000008669) #20	Rnf144a (ENSMAUG00000014880) #21	Id2 (ENSMAUG00000012468) #22	Kidins220 (ENSMAUG00000011599) #23	Mboat2 (ENSMAUG00000005505) #24	Asap2 (ENSMAUG00000001240) #25	Itgb1bp1 (ENSMAUG00000017998) #26	Cpsf3 (ENSMAUG00000000166) #27	Iah1 (ENSMAUG00000018865) #28	Adam17 (ENSMAUG00000015291) #29	ENSMAUG00000017035 ##30	Taf1b (ENSMAUG00000013477) #31	Grhl1 (ENSMAUG00000013649) #32	ENSMAUG00000016595 #35
Golden Hamster	MODERN SPECIES	704	2210016L21Rik (ENSMAUG00000021072)	ENSMAUG00000018493	ENSMAUG00000000936	ENSMAUG00000012403	ENSMAUG00000008365	ENSMAUG00000014735	Git2 (ENSMAUG00000010532)	ENSMAUG00000012818	Gltp (ENSMAUG00000000222)	Trpv4 (ENSMAUG00000016534)	Fam222a (ENSMAUG00000015503)	Mvk (ENSMAUG00000011969)	Mmab (ENSMAUG00000011390)	Ube3b (ENSMAUG00000020390)	Kctd10 (ENSMAUG00000000200)	ENSMAUG00000002109 #22	Myo1h (ENSMAUG00000014848)	Foxn4 (ENSMAUG00000011231)	ENSMAUG00000019057	ENSMAUG00000000167	Ung (ENSMAUG00000011896)	Alkbh2 (ENSMAUG00000009228)	Usp30 (ENSMAUG00000001182)	Svop (ENSMAUG00000014398)	Dao (ENSMAUG00000000506)	Ssh1 (ENSMAUG00000000524)	ENSMAUG00000017903	Selplg (ENSMAUG00000015330)	Tmem119 (ENSMAUG00000014114)	ENSMAUG00000012004	Sart3 (ENSMAUG00000012434)
Chinese hamster chok1gshd	MODERN SPECIES	229	Pxdn (ENSCGRG00001003434)	Myt1l (ENSCGRG00001004175)	Eipr1 (ENSCGRG00001013353)	Trappc12 (ENSCGRG00001022951)	Adi1 (ENSCGRG00001008870)	Rnaseh1 (ENSCGRG00001008950)	Rps7 (ENSCGRG00001017318)	Colec11 (ENSCGRG00001015605)	Allc (ENSCGRG00001009626)	ENSCGRG00001022074	Sox11 (ENSCGRG00001007958)	Cmpk2 (ENSCGRG00001018716) #19	Rsad2 (ENSCGRG00001014337) #20	Rnf144a (ENSCGRG00001007035) #21	ENSCGRG00001023880	Id2 (ENSCGRG00001023029) #22	Kidins220 (ENSCGRG00001016681) #23	Mboat2 (ENSCGRG00001015841) #24	Asap2 (ENSCGRG00001022680) #25	Itgb1bp1 (ENSCGRG00001000664) #26	Cpsf3 (ENSCGRG00001013134) #27	Iah1 (ENSCGRG00001019624) #28	Adam17 (ENSCGRG00001024922) #29	Ywhaq (ENSCGRG00001024724) #30	ENSCGRG00001018516 #31	Grhl1 (ENSCGRG00001024970) #32	Klf11 (ENSCGRG00001018478) #33	Cys1 (ENSCGRG00001013951) #34	Rrm2 (ENSCGRG00001007841) #35	Hpcal1 (ENSCGRG00001023170) #36	ENSCGRG00001015979 #37
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.v #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Prairie vole	MODERN SPECIES	93												Cmpk2 (ENSMOCG00000000423) #19	ENSMOCG00000020673 #20	Rnf144a (ENSMOCG00000000314) #21	ENSMOCG00000012398	Id2 (ENSMOCG00000002908) #22	Kidins220 (ENSMOCG00000011232) #23	Mboat2 (ENSMOCG00000021674) #24	Asap2 (ENSMOCG00000019749) #25	Itgb1bp1 (ENSMOCG00000017072) #26	Cpsf3 (ENSMOCG00000020067) #27	Iah1 (ENSMOCG00000017872) #28	Adam17 (ENSMOCG00000010700) #29	Ywhaq (ENSMOCG00000020316) #30	Taf1b (ENSMOCG00000005916) #31	Grhl1 (ENSMOCG00000019210) #32	ENSMOCG00000003070	ENSMOCG00000014995 #33	Cys1 (ENSMOCG00000017656) #34	ENSMOCG00000018114 #35	ENSMOCG00000010909 #35
Northern American deer mouse	MODERN SPECIES	14	Tpo (ENSPEMG00000009447)	Pxdn (ENSPEMG00000021818)	Myt1l (ENSPEMG00000023585)	Eipr1 (ENSPEMG00000018456)	Trappc12 (ENSPEMG00000021832)	Adi1 (ENSPEMG00000022007)	Rnaseh1 (ENSPEMG00000022465)	Rps7 (ENSPEMG00000011185)	Colec11 (ENSPEMG00000021365)	Allc (ENSPEMG00000022050)	ENSPEMG00000022353	Sox11 (ENSPEMG00000014211)	Cmpk2 (ENSPEMG00000009342) #19	Rsad2 (ENSPEMG00000008928) #20	Rnf144a (ENSPEMG00000008311) #21	Id2 (ENSPEMG00000006926) #22	Kidins220 (ENSPEMG00000002148) #23	Mboat2 (ENSPEMG00000000110) #24	Asap2 (ENSPEMG00000016930) #25	Itgb1bp1 (ENSPEMG00000012447) #26	Cpsf3 (ENSPEMG00000017668) #27	Iah1 (ENSPEMG00000016641) #28	Adam17 (ENSPEMG00000015840) #29	ENSPEMG00000027877 ##30	Taf1b (ENSPEMG00000013642) #31	Grhl1 (ENSPEMG00000012157) #32	Klf11 (ENSPEMG00000011311) #33	Cys1 (ENSPEMG00000025881) #34	Rrm2 (ENSPEMG00000010359) #35	Hpcal1 (ENSPEMG00000025119) #36	Nol10 (ENSPEMG00000008676)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1517	Pxdn (ENSNGAG00000010528)	Myt1l (ENSNGAG00000007555)	Eipr1 (ENSNGAG00000001305)	Trappc12 (ENSNGAG00000000385)	Adi1 (ENSNGAG00000019181)	Rnaseh1 (ENSNGAG00000015966)	Rps7 (ENSNGAG00000015037)	Colec11 (ENSNGAG00000014244)	Allc (ENSNGAG00000004596)	ENSNGAG00000002422	ENSNGAG00000017946	Sox11 (ENSNGAG00000016772)	Cmpk2 (ENSNGAG00000020998) #19	Rsad2 (ENSNGAG00000020530) #20	Rnf144a (ENSNGAG00000018727) #21	Id2 (ENSNGAG00000018053) #22	Kidins220 (ENSNGAG00000012753) #23	Mboat2 (ENSNGAG00000004975) #24	Asap2 (ENSNGAG00000020450) #25	Itgb1bp1 (ENSNGAG00000015478) #26	Cpsf3 (ENSNGAG00000019836) #27	Iah1 (ENSNGAG00000017153) #28	Adam17 (ENSNGAG00000016571) #29	Ywhaq (ENSNGAG00000012388) #30	ENSNGAG00000015636	Taf1b (ENSNGAG00000010048) #31	Grhl1 (ENSNGAG00000004562) #32	Klf11 (ENSNGAG00000018758) #33	Cys1 (ENSNGAG00000015080) #34	Rrm2 (ENSNGAG00000013008) #35	Hpcal1 (ENSNGAG00000012465) #36
Lesser Egyptian jerboa	MODERN SPECIES	60	Adi1 (ENSJJAG00000015172)	Rnaseh1 (ENSJJAG00000020238)	Rps7 (ENSJJAG00000022333)	ENSJJAG00000016342	Colec11 (ENSJJAG00000024203)	Allc (ENSJJAG00000022633)	ENSJJAG00000019578	ENSJJAG00000008563	ENSJJAG00000001095	Sox11 (ENSJJAG00000020821)	ENSJJAG00000014421	Cmpk2 (ENSJJAG00000014410) #19	Rsad2 (ENSJJAG00000014573) #20	Rnf144a (ENSJJAG00000019519) #21	ENSJJAG00000017500	Id2 (ENSJJAG00000001304) #22	ENSJJAG00000015827	ENSJJAG00000020082
Kangaroo rat	MODERN SPECIES	339														Rsad2 (ENSDORG00000008537) #20	Rnf144a (ENSDORG00000010145) #21	Id2 (ENSDORG00000014815) #22	Kidins220 (ENSDORG00000014817) #23	Mboat2 (ENSDORG00000007348) #24	Asap2 (ENSDORG00000014261) #25	Itgb1bp1 (ENSDORG00000014262) #26	Cpsf3 (ENSDORG00000014263) #27	Adam17 (ENSDORG00000014267) #29	ENSDORG00000028741 ##30	Taf1b (ENSDORG00000010154) #31	ENSDORG00000028599 #32	ENSDORG00000024766 #32	ENSDORG00000024620 #33	Rrm2 (ENSDORG00000002514) #35	Hpcal1 (ENSDORG00000007055) #36	Odc1 (ENSDORG00000002669) #37	Nol10 (ENSDORG00000001331)
Primates	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.e.a #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Lemuriformes_a	ANCESTRAL SPECIES	10				ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990.e.a #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Greater bamboo lemur	MODERN SPECIES	430										ALLC (ENSPSMG00000020625)	DCDC2C (ENSPSMG00000020594)	SOX11 (ENSPSMG00000020583)	CMPK2 (ENSPSMG00000020579) #19	RNF144A (ENSPSMG00000020570) #21	ENSPSMG00000020553	ID2 (ENSPSMG00000020546) #22	KIDINS220 (ENSPSMG00000020495) #23	MBOAT2 (ENSPSMG00000020319) #24	ASAP2 (ENSPSMG00000020266) #25	ENSPSMG00000020223 #26	CPSF3 (ENSPSMG00000020174) #27	IAH1 (ENSPSMG00000020104) #28	ADAM17 (ENSPSMG00000020083) #29	YWHAQ (ENSPSMG00000020036) #30	TAF1B (ENSPSMG00000019984) #31	GRHL1 (ENSPSMG00000019897) #32	KLF11 (ENSPSMG00000019846) #33	CYS1 (ENSPSMG00000019836) #34	RRM2 (ENSPSMG00000019823) #35	HPCAL1 (ENSPSMG00000019803) #36	ODC1 (ENSPSMG00000019773) #37
Coquerels sifaka	MODERN SPECIES	178												SOX11 (ENSPCOG00000027861)	CMPK2 (ENSPCOG00000026777) #19	RSAD2 (ENSPCOG00000009941) #20	RNF144A (ENSPCOG00000022449) #21	ID2 (ENSPCOG00000027288) #22	KIDINS220 (ENSPCOG00000004733) #23	ENSPCOG00000021299	MBOAT2 (ENSPCOG00000009724) #24	ASAP2 (ENSPCOG00000019755) #25	ENSPCOG00000023364 #26	CPSF3 (ENSPCOG00000023016) #27	IAH1 (ENSPCOG00000023355) #28	ADAM17 (ENSPCOG00000027775) #29	ENSPCOG00000023761	YWHAQ (ENSPCOG00000027184) #30
Mouse lemur	MODERN SPECIES	30	EIPR1 (ENSMICG00000009793)	TRAPPC12 (ENSMICG00000030035)	ADI1 (ENSMICG00000046745)	RNASEH1 (ENSMICG00000033156)	ENSMICG00000031923	COLEC11 (ENSMICG00000037566)	ALLC (ENSMICG00000016182)	DCDC2C (ENSMICG00000044531)	ENSMICG00000032327	ENSMICG00000041516	SOX11 (ENSMICG00000026777)	ENSMICG00000038260	CMPK2 (ENSMICG00000035731) #19	RSAD2 (ENSMICG00000000161) #20	RNF144A (ENSMICG00000006187) #21	ID2 (ENSMICG00000033026) #22	KIDINS220 (ENSMICG00000010065) #23	MBOAT2 (ENSMICG00000010098) #24	ASAP2 (ENSMICG00000002345) #25	ITGB1BP1 (ENSMICG00000002359) #26	CPSF3 (ENSMICG00000002363) #27	IAH1 (ENSMICG00000002377) #28	ADAM17 (ENSMICG00000002380) #29	YWHAQ (ENSMICG00000000973) #30	ENSMICG00000045104	SLC66A3 (ENSMICG00000043387)	TAF1B (ENSMICG00000012714) #31	GRHL1 (ENSMICG00000012737) #32	KLF11 (ENSMICG00000012761) #33	CYS1 (ENSMICG00000027772) #34	ENSMICG00000012789 #35
Bushbaby	MODERN SPECIES	137																ID2 (ENSOGAG00000012565) #22	KIDINS220 (ENSOGAG00000012566) #23	MBOAT2 (ENSOGAG00000034475) #24	ENSOGAG00000034565	ENSOGAG00000034773	ASAP2 (ENSOGAG00000001677) #25	ITGB1BP1 (ENSOGAG00000001679) #26	CPSF3 (ENSOGAG00000001680) #27	IAH1 (ENSOGAG00000000544) #28	ADAM17 (ENSOGAG00000000546) #29	YWHAQ (ENSOGAG00000000547) #30	TAF1B (ENSOGAG00000014337) #31	GRHL1 (ENSOGAG00000014342) #32	KLF11 (ENSOGAG00000026035) #33	ENSOGAG00000028490	RRM2 (ENSOGAG00000007075) #35
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	6383																ENSTSYG00000026935 #22	KIDINS220 (ENSTSYG00000013612) #23	MBOAT2 (ENSTSYG00000001803) #24
Tarsier	MODERN SPECIES	619																ENSTSYG00000001685 #22
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Hominidae	ANCESTRAL SPECIES	19	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.w.a #35
Pan	ANCESTRAL SPECIES	17	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b.x	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.o #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.w.a #35
Chimpanzee	MODERN SPECIES	14	TPO (ENSPTRG00000049999)	PXDN (ENSPTRG00000011612)	MYT1L (ENSPTRG00000011611)	EIPR1 (ENSPTRG00000011621)	TRAPPC12 (ENSPTRG00000011622)	ADI1 (ENSPTRG00000011624)	RNASEH1 (ENSPTRG00000011614)	RPS7 (ENSPTRG00000011615)	COLEC11 (ENSPTRG00000011616)	ALLC (ENSPTRG00000011618)	DCDC2C (ENSPTRG00000033961)	SOX11 (ENSPTRG00000045174)	CMPK2 (ENSPTRG00000011627) #19	RSAD2 (ENSPTRG00000011629) #20	RNF144A (ENSPTRG00000011630) #21	ID2 (ENSPTRG00000011632) #22	KIDINS220 (ENSPTRG00000011633) #23	MBOAT2 (ENSPTRG00000011634) #24	ASAP2 (ENSPTRG00000011636) #25	ENSPTRG00000043418	ITGB1BP1 (ENSPTRG00000011637) #26	CPSF3 (ENSPTRG00000011638) #27	IAH1 (ENSPTRG00000011639) #28	ADAM17 (ENSPTRG00000011640) #29	YWHAQ (ENSPTRG00000011641) #30	TAF1B (ENSPTRG00000011642) #31	GRHL1 (ENSPTRG00000011643) #32	KLF11 (ENSPTRG00000011645) #33	ENSPTRG00000046195	CYS1 (ENSPTRG00000030565) #34	RRM2 (ENSPTRG00000042985) #35
Bonobo	MODERN SPECIES	14	PXDN (ENSPPAG00000043456)	MYT1L (ENSPPAG00000021774)	EIPR1 (ENSPPAG00000018834)	TRAPPC12 (ENSPPAG00000026974)	ADI1 (ENSPPAG00000033298)	RNASEH1 (ENSPPAG00000034221)	RPS7 (ENSPPAG00000039898)	COLEC11 (ENSPPAG00000038334)	ALLC (ENSPPAG00000043709)	DCDC2C (ENSPPAG00000035755)	ENSPPAG00000031455	ENSPPAG00000036968	ENSPPAG00000037362	RSAD2 (ENSPPAG00000039493) #20	RNF144A (ENSPPAG00000037389) #21	ID2 (ENSPPAG00000034410) #22	KIDINS220 (ENSPPAG00000041858) #23	MBOAT2 (ENSPPAG00000043445) #24	ENSPPAG00000043888	ASAP2 (ENSPPAG00000008883) #25	ITGB1BP1 (ENSPPAG00000039328) #26	CPSF3 (ENSPPAG00000042457) #27	IAH1 (ENSPPAG00000033783) #28	ADAM17 (ENSPPAG00000038185) #29	ENSPPAG00000043019 ##30	TAF1B (ENSPPAG00000031684) #31	GRHL1 (ENSPPAG00000030977) #32	KLF11 (ENSPPAG00000030099) #33	ENSPPAG00000010181	RRM2 (ENSPPAG00000040070) #35	HPCAL1 (ENSPPAG00000032513) #36
Human	MODERN SPECIES	11	TPO (ENSG00000115705)	PXDN (ENSG00000130508)	MYT1L (ENSG00000186487)	EIPR1 (ENSG00000032389)	TRAPPC12 (ENSG00000171853)	ADI1 (ENSG00000182551)	RNASEH1 (ENSG00000171865)	RPS7 (ENSG00000171863)	COLEC11 (ENSG00000118004)	ALLC (ENSG00000151360)	DCDC2C (ENSG00000214866)	SOX11 (ENSG00000176887)	CMPK2 (ENSG00000134326) #19	RSAD2 (ENSG00000134321) #20	RNF144A (ENSG00000151692) #21	ID2 (ENSG00000115738) #22	KIDINS220 (ENSG00000134313) #23	MBOAT2 (ENSG00000143797) #24	ASAP2 (ENSG00000151693) #25	ITGB1BP1 (ENSG00000119185) #26	CPSF3 (ENSG00000119203) #27	IAH1 (ENSG00000134330) #28	ADAM17 (ENSG00000151694) #29	YWHAQ (ENSG00000134308) #30	TAF1B (ENSG00000115750) #31	GRHL1 (ENSG00000134317) #32	KLF11 (ENSG00000172059) #33	CYS1 (ENSG00000205795) #34	RRM2 (ENSG00000171848) #35	HPCAL1 (ENSG00000115756) #36	ODC1 (ENSG00000115758) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660
Pan	ANCESTRAL SPECIES	2	ENSGT00910000146882	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p #22	ENSGT00940000155048	ENSGT00390000004428.a.g.b.c.a.a	ENSGT00940000155143.x	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b
Bonobo	MODERN SPECIES	16	ENSPPAG00000032911	ENSPPAG00000023910	ADAMTS9 (ENSPPAG00000027506)	PRICKLE2 (ENSPPAG00000036788)	PSMD6 (ENSPPAG00000008985)	ATXN7 (ENSPPAG00000038542)	THOC7 (ENSPPAG00000044086)	C3orf49 (ENSPPAG00000044092)	ENSPPAG00000014773	SYNPR (ENSPPAG00000037002)	ENSPPAG00000034871	ENSPPAG00000033241	ENSPPAG00000037095	FEZF2 (ENSPPAG00000039379)	C3orf14 (ENSPPAG00000033418)	ENSPPAG00000005174 #22	ENSPPAG00000027644	PTPRG (ENSPPAG00000036859)	ENSPPAG00000015559	ENSPPAG00000034829	ENSPPAG00000037040	ENSPPAG00000004830	CFAP20DC (ENSPPAG00000037900)	FAM3D (ENSPPAG00000033729)	FAM107A (ENSPPAG00000043565)	ACOX2 (ENSPPAG00000029182)	KCTD6 (ENSPPAG00000031362)	PDHB (ENSPPAG00000028933)	PXK (ENSPPAG00000027245)	HTD2 (ENSPPAG00000036591)	RPP14 (ENSPPAG00000041153)
Chimpanzee	MODERN SPECIES	16	ENSPTRG00000046672	MAGI1 (ENSPTRG00000015083)	ADAMTS9 (ENSPTRG00000015082)	PRICKLE2 (ENSPTRG00000015081)	PSMD6 (ENSPTRG00000015078)	ATXN7 (ENSPTRG00000015077)	THOC7 (ENSPTRG00000015076)	C3H3orf49 (ENSPTRG00000015075)	SNTN (ENSPTRG00000015074)	SYNPR (ENSPTRG00000015073)	ENSPTRG00000051485	ENSPTRG00000052322	CADPS (ENSPTRG00000015072)	FEZF2 (ENSPTRG00000015071)	C3H3orf14 (ENSPTRG00000015070)	ENSPTRG00000038955 #22	ENSPTRG00000051643	PTPRG (ENSPTRG00000015067)	ENSPTRG00000047476	ENSPTRG00000043102	FHIT (ENSPTRG00000015065)	ENSPTRG00000034348	CFAP20DC (ENSPTRG00000015064)	FAM3D (ENSPTRG00000022801)	FAM107A (ENSPTRG00000015062)	ACOX2 (ENSPTRG00000015061)	KCTD6 (ENSPTRG00000015060)	PDHB (ENSPTRG00000015059)	PXK (ENSPTRG00000015058)	HTD2 (ENSPTRG00000040419)	RPP14 (ENSPTRG00000048740)
Gorilla	MODERN SPECIES	16	ENSGGOG00000042398	MAGI1 (ENSGGOG00000004958)	ADAMTS9 (ENSGGOG00000015540)	PRICKLE2 (ENSGGOG00000006935)	PSMD6 (ENSGGOG00000004430)	ATXN7 (ENSGGOG00000012900)	THOC7 (ENSGGOG00000024282)	C3orf49 (ENSGGOG00000012760)	SNTN (ENSGGOG00000012870)	SYNPR (ENSGGOG00000002513)	ENSGGOG00000037389	ENSGGOG00000042564	ENSGGOG00000015194	ENSGGOG00000026200	C3orf14 (ENSGGOG00000043774)	ENSGGOG00000022395 #22	ENSGGOG00000026144	PTPRG (ENSGGOG00000006858)	FHIT (ENSGGOG00000042949)	CFAP20DC (ENSGGOG00000034942)	FAM3D (ENSGGOG00000015448)	FAM107A (ENSGGOG00000015452)	ACOX2 (ENSGGOG00000015441)	KCTD6 (ENSGGOG00000010706)	PDHB (ENSGGOG00000013150)	PXK (ENSGGOG00000015022)	HTD2 (ENSGGOG00000040783)	RPP14 (ENSGGOG00000016164)	ABHD6 (ENSGGOG00000015826)	DNASE1L3 (ENSGGOG00000010072)	FLNB (ENSGGOG00000010039)
Orangutan	MODERN SPECIES	14	MYT1L (ENSPPYG00000012686)	ENSPPYG00000040708	EIPR1 (ENSPPYG00000012685)	TRAPPC12 (ENSPPYG00000012684)	ENSPPYG00000012683	RNASEH1 (ENSPPYG00000025873)	RPS7 (ENSPPYG00000025872)	COLEC11 (ENSPPYG00000012682)	ALLC (ENSPPYG00000012681)	ENSPPYG00000012680	SOX11 (ENSPPYG00000036338)	CMPK2 (ENSPPYG00000012675) #19	RSAD2 (ENSPPYG00000012674) #20	RNF144A (ENSPPYG00000012673) #21	ENSPPYG00000030180	ID2 (ENSPPYG00000012719) #22	KIDINS220 (ENSPPYG00000012670) #23	MBOAT2 (ENSPPYG00000012669) #24	ENSPPYG00000037864	ASAP2 (ENSPPYG00000012668) #25	ITGB1BP1 (ENSPPYG00000031588) #26	CPSF3 (ENSPPYG00000012666) #27	IAH1 (ENSPPYG00000012665) #28	ADAM17 (ENSPPYG00000012664) #29	YWHAQ (ENSPPYG00000012663) #30	TAF1B (ENSPPYG00000012662) #31	GRHL1 (ENSPPYG00000012661) #32	KLF11 (ENSPPYG00000012659) #33	CYS1 (ENSPPYG00000012657) #34	RRM2 (ENSPPYG00000012656) #35	HPCAL1 (ENSPPYG00000012655) #36
Gibbon	MODERN SPECIES	9	TPO (ENSNLEG00000008418)	PXDN (ENSNLEG00000008442)	MYT1L (ENSNLEG00000008466)	EIPR1 (ENSNLEG00000007514)	TRAPPC12 (ENSNLEG00000007515)	ADI1 (ENSNLEG00000007518)	RNASEH1 (ENSNLEG00000015400)	RPS7 (ENSNLEG00000034280)	ENSNLEG00000031083	ALLC (ENSNLEG00000015418)	DCDC2C (ENSNLEG00000015424)	ENSNLEG00000031381 #19	RSAD2 (ENSNLEG00000015429) #20	RNF144A (ENSNLEG00000015431) #21	ENSNLEG00000035496	ID2 (ENSNLEG00000013192) #22	KIDINS220 (ENSNLEG00000013206) #23	MBOAT2 (ENSNLEG00000013229) #24	ASAP2 (ENSNLEG00000013248) #25	ENSNLEG00000032390	ITGB1BP1 (ENSNLEG00000013322) #26	CPSF3 (ENSNLEG00000013359) #27	IAH1 (ENSNLEG00000013435) #28	ADAM17 (ENSNLEG00000013455) #29	ENSNLEG00000034153	YWHAQ (ENSNLEG00000013534) #30	TAF1B (ENSNLEG00000013577) #31	GRHL1 (ENSNLEG00000013634) #32	KLF11 (ENSNLEG00000013701) #33	ENSNLEG00000031300	ENSNLEG00000031728 #34
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Vervet Monkey	MODERN SPECIES	5	PXDN (ENSCSAG00000006916)	MYT1L (ENSCSAG00000006922)	EIPR1 (ENSCSAG00000006928)	TRAPPC12 (ENSCSAG00000006934)	ADI1 (ENSCSAG00000006938)	RNASEH1 (ENSCSAG00000006943)	RPS7 (ENSCSAG00000006946)	COLEC11 (ENSCSAG00000006951)	ALLC (ENSCSAG00000006987)	DCDC2C (ENSCSAG00000007016)	SOX11 (ENSCSAG00000000373)	ENSCSAG00000007025	CMPK2 (ENSCSAG00000007040) #19	RSAD2 (ENSCSAG00000007051) #20	RNF144A (ENSCSAG00000007058) #21	ID2 (ENSCSAG00000007060) #22	KIDINS220 (ENSCSAG00000007084) #23	MBOAT2 (ENSCSAG00000007093) #24	ASAP2 (ENSCSAG00000007108) #25	ITGB1BP1 (ENSCSAG00000007115) #26	CPSF3 (ENSCSAG00000007125) #27	IAH1 (ENSCSAG00000007130) #28	ADAM17 (ENSCSAG00000007138) #29	ENSCSAG00000007145 ##30	TAF1B (ENSCSAG00000007150) #31	GRHL1 (ENSCSAG00000007158) #32	KLF11 (ENSCSAG00000007163) #33	CYS1 (ENSCSAG00000007167) #34	ENSCSAG00000007172	RRM2 (ENSCSAG00000007201) #35	HPCAL1 (ENSCSAG00000007213) #36
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Macaca	ANCESTRAL SPECIES	17	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.j	ENSGT00940000159468	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000170471.A.b.b.a.b.b	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a	ENSGT00940000154030.a.b #19	ENSGT00910000148182	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.b ##30	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.w.a #35	ENSGT00940000163505.b.b.b.b.b
Crab-eating macaque	MODERN SPECIES	4	TRAPPC12 (ENSMFAG00000045483)	ADI1 (ENSMFAG00000040320)	RNASEH1 (ENSMFAG00000000063)	ALLC (ENSMFAG00000000829)	ENSMFAG00000042581	DCDC2C (ENSMFAG00000042487)	ENSMFAG00000061013	ENSMFAG00000057748	ENSMFAG00000049271	ENSMFAG00000060203	ENSMFAG00000048573	ENSMFAG00000049943	RSAD2 (ENSMFAG00000055130) #20	RNF144A (ENSMFAG00000040034) #21	ENSMFAG00000057704	ID2 (ENSMFAG00000000039) #22	KIDINS220 (ENSMFAG00000031830) #23	MBOAT2 (ENSMFAG00000003741) #24	ASAP2 (ENSMFAG00000037845) #25	ITGB1BP1 (ENSMFAG00000045554) #26	CPSF3 (ENSMFAG00000001339) #27	IAH1 (ENSMFAG00000039055) #28	ADAM17 (ENSMFAG00000039177) #29	ENSMFAG00000004741 ##30	TAF1B (ENSMFAG00000041401) #31	GRHL1 (ENSMFAG00000032356) #32	KLF11 (ENSMFAG00000039490) #33	ENSMFAG00000052007	RRM2 (ENSMFAG00000040783) #35	HPCAL1 (ENSMFAG00000044146) #36	ENSMFAG00000038147 #37
Rhesus	MODERN SPECIES	4	EIPR1 (ENSMMUG00000022879)	TRAPPC12 (ENSMMUG00000019468)	ADI1 (ENSMMUG00000019471)	RNASEH1 (ENSMMUG00000014475)	RPS7 (ENSMMUG00000011870)	ALLC (ENSMMUG00000004632)	DCDC2C (ENSMMUG00000023273)	ENSMMUG00000052757	ENSMMUG00000061676	SOX11 (ENSMMUG00000038367)	ENSMMUG00000058497	CMPK2 (ENSMMUG00000015968) #19	ENSMMUG00000050777	RSAD2 (ENSMMUG00000015969) #20	RNF144A (ENSMMUG00000045908) #21	ID2 (ENSMMUG00000003237) #22	KIDINS220 (ENSMMUG00000021036) #23	MBOAT2 (ENSMMUG00000021037) #24	ASAP2 (ENSMMUG00000018033) #25	ITGB1BP1 (ENSMMUG00000018036)	CPSF3 (ENSMMUG00000018038) #27	IAH1 (ENSMMUG00000018045) #28	ADAM17 (ENSMMUG00000012921) #29	ENSMMUG00000062403	YWHAQ (ENSMMUG00000006965) #30	TAF1B (ENSMMUG00000001530) #31	GRHL1 (ENSMMUG00000001535) #32	KLF11 (ENSMMUG00000002054) #33	CYS1 (ENSMMUG00000030941) #34	RRM2 (ENSMMUG00000002057) #35	ENSMMUG00000053871
Pig-tailed macaque	MODERN SPECIES	127											SOX11 (ENSMNEG00000008816)	ENSMNEG00000032217	CMPK2 (ENSMNEG00000018646) #19	RSAD2 (ENSMNEG00000040478) #20	RNF144A (ENSMNEG00000030505) #21	ID2 (ENSMNEG00000039277) #22	KIDINS220 (ENSMNEG00000044570) #23	MBOAT2 (ENSMNEG00000036853) #24	ENSMNEG00000042727	ASAP2 (ENSMNEG00000020414) #25	ITGB1BP1 (ENSMNEG00000043390) #26	CPSF3 (ENSMNEG00000039447) #27	IAH1 (ENSMNEG00000038428) #28	ENSMNEG00000039629	ADAM17 (ENSMNEG00000031025) #29	YWHAQ (ENSMNEG00000035884) #30	TAF1B (ENSMNEG00000007382) #31	GRHL1 (ENSMNEG00000030598) #32	KLF11 (ENSMNEG00000034723) #33	ENSMNEG00000018854	CYS1 (ENSMNEG00000030186) #34
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.w.a #35
Olive baboon	MODERN SPECIES	5	EIPR1 (ENSPANG00000007706)	ENSPANG00000039830	TRAPPC12 (ENSPANG00000022110)	ENSPANG00000012606	ADI1 (ENSPANG00000021603)	RNASEH1 (ENSPANG00000000443)	ENSPANG00000011092	COLEC11 (ENSPANG00000011091)	ALLC (ENSPANG00000017775)	DCDC2C (ENSPANG00000007153)	SOX11 (ENSPANG00000041661)	ENSPANG00000051199	CMPK2 (ENSPANG00000026237) #19	RSAD2 (ENSPANG00000026240) #20	RNF144A (ENSPANG00000023570) #21	ID2 (ENSPANG00000039736) #22	KIDINS220 (ENSPANG00000021602) #23	MBOAT2 (ENSPANG00000022343) #24	ASAP2 (ENSPANG00000023973) #25	ITGB1BP1 (ENSPANG00000016797) #26	CPSF3 (ENSPANG00000016798) #27	IAH1 (ENSPANG00000009398) #28	ADAM17 (ENSPANG00000000727) #29	YWHAQ (ENSPANG00000037411) #30	TAF1B (ENSPANG00000013803) #31	GRHL1 (ENSPANG00000020814) #32	ENSPANG00000031829	CYS1 (ENSPANG00000005251) #34	RRM2 (ENSPANG00000018767) #35	ENSPANG00000044848	HPCAL1 (ENSPANG00000042769) #36
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00940000157666	ENSGT00940000155671.q.b	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00860000136202	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.x #35
Sooty mangabey	MODERN SPECIES	121	PXDN (ENSCATG00000027538)	MYT1L (ENSCATG00000036695)	EIPR1 (ENSCATG00000029523)	TRAPPC12 (ENSCATG00000034861)	ADI1 (ENSCATG00000014947)	ENSCATG00000016515	RPS7 (ENSCATG00000029336)	COLEC11 (ENSCATG00000029509)	ALLC (ENSCATG00000030695)	DCDC2C (ENSCATG00000025057)	SOX11 (ENSCATG00000020144)	ENSCATG00000018474	CMPK2 (ENSCATG00000040689) #19	RSAD2 (ENSCATG00000030147) #20	RNF144A (ENSCATG00000033975) #21	ID2 (ENSCATG00000030248) #22	KIDINS220 (ENSCATG00000041275) #23	MBOAT2 (ENSCATG00000040596) #24	ENSCATG00000011380	ASAP2 (ENSCATG00000035990) #25	ITGB1BP1 (ENSCATG00000036040) #26	CPSF3 (ENSCATG00000014770) #27	IAH1 (ENSCATG00000029613) #28	ADAM17 (ENSCATG00000037482) #29	ENSCATG00000023335 #30	TAF1B (ENSCATG00000039789) #31	GRHL1 (ENSCATG00000027324) #32	KLF11 (ENSCATG00000037396) #33	ENSCATG00000033874	CYS1 (ENSCATG00000014723) #34	ENSCATG00000031151 #35
Drill	MODERN SPECIES	1452																ID2 (ENSMLEG00000040695) #22	KIDINS220 (ENSMLEG00000035601) #23	MBOAT2 (ENSMLEG00000037301) #24	ENSMLEG00000040215	ASAP2 (ENSMLEG00000033183) #25	ITGB1BP1 (ENSMLEG00000031967) #26	CPSF3 (ENSMLEG00000026825) #27	IAH1 (ENSMLEG00000044290) #28	ADAM17 (ENSMLEG00000042175) #29	YWHAQ (ENSMLEG00000030005) #30	TAF1B (ENSMLEG00000043999) #31	GRHL1 (ENSMLEG00000036453) #32	KLF11 (ENSMLEG00000036570) #33	ENSMLEG00000042927	ENSMLEG00000035635 #35	HPCAL1 (ENSMLEG00000039247) #36
Rhinopithecus	ANCESTRAL SPECIES	174																ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990.a #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00910000147368	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a.w.a #35	ENSGT00940000154645.A #36
Golden snub-nosed monkey	MODERN SPECIES	2175																ID2 (ENSRROG00000004887) #22	KIDINS220 (ENSRROG00000036660) #23	MBOAT2 (ENSRROG00000045314) #24	ENSRROG00000033889	ENSRROG00000035274	ASAP2 (ENSRROG00000042260) #25	ENSRROG00000044107 #26	CPSF3 (ENSRROG00000033792) #27	IAH1 (ENSRROG00000034099) #28	ENSRROG00000036140	ADAM17 (ENSRROG00000038460) #29	ENSRROG00000025134	YWHAQ (ENSRROG00000044691) #30	TAF1B (ENSRROG00000024712) #31	GRHL1 (ENSRROG00000028348) #32	KLF11 (ENSRROG00000041608) #33
Black snub-nosed monkey	MODERN SPECIES	147																ID2 (ENSRBIG00000044689) #22	KIDINS220 (ENSRBIG00000035069) #23	MBOAT2 (ENSRBIG00000035711) #24	ASAP2 (ENSRBIG00000035134) #25	ENSRBIG00000034346	ENSRBIG00000039204 #26	CPSF3 (ENSRBIG00000041615) #27	IAH1 (ENSRBIG00000029112) #28	ADAM17 (ENSRBIG00000031143) #29	ENSRBIG00000023329	YWHAQ (ENSRBIG00000023381) #30	TAF1B (ENSRBIG00000028101) #31	GRHL1 (ENSRBIG00000024539) #32	KLF11 (ENSRBIG00000037952) #33	RRM2 (ENSRBIG00000033258) #35	HPCAL1 (ENSRBIG00000034017) #36
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990.c #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.b.b ##30	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.y.a #35
Cebidae	ANCESTRAL SPECIES	40	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990.c #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.b.b ##30	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.y.a.b #35
Marmoset	MODERN SPECIES	5	PXDN (ENSCJAG00000051702)	MYT1L (ENSCJAG00000007286)	EIPR1 (ENSCJAG00000007858)	TRAPPC12 (ENSCJAG00000007867)	ENSCJAG00000007906	RNASEH1 (ENSCJAG00000035450)	ENSCJAG00000016462	COLEC11 (ENSCJAG00000016457)	ENSCJAG00000065738	ENSCJAG00000078912	DCDC2C (ENSCJAG00000083758)	SOX11 (ENSCJAG00000038240)	CMPK2 (ENSCJAG00000085281) #19	RSAD2 (ENSCJAG00000010219) #20	RNF144A (ENSCJAG00000010225) #21	ENSCJAG00000006037 #22	KIDINS220 (ENSCJAG00000006054) #23	ENSCJAG00000053616	MBOAT2 (ENSCJAG00000006207) #24	ASAP2 (ENSCJAG00000006233) #25	ENSCJAG00000006250 #26	CPSF3 (ENSCJAG00000006276) #27	IAH1 (ENSCJAG00000006360) #28	ADAM17 (ENSCJAG00000006369) #29	ENSCJAG00000062528	YWHAQ (ENSCJAG00000040849) ##30	TAF1B (ENSCJAG00000006420) #31	GRHL1 (ENSCJAG00000006431) #32	KLF11 (ENSCJAG00000046813) #33	ENSCJAG00000006533 #35	HPCAL1 (ENSCJAG00000041528) #36
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00390000015789.c.b	ENSGT00940000155623 #25	ENSGT00390000003990.c #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.b.b ##30	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000016845 #34	ENSGT00390000013305.a.a.y.a.b #35
Capuchin	MODERN SPECIES	1																ID2 (ENSCCAG00000034943) #22	KIDINS220 (ENSCCAG00000035619) #23	MBOAT2 (ENSCCAG00000028053) #24	ASAP2 (ENSCCAG00000033861) #25	ITGB1BP1 (ENSCCAG00000036127) #26	CPSF3 (ENSCCAG00000036730) #27	ENSCCAG00000010701	IAH1 (ENSCCAG00000034153) #28	ADAM17 (ENSCCAG00000035481) #29	ENSCCAG00000001935	YWHAQ (ENSCCAG00000031746) #30	TAF1B (ENSCCAG00000031135) #31	GRHL1 (ENSCCAG00000022259) #32	KLF11 (ENSCCAG00000026312) #33	CYS1 (ENSCCAG00000028829) #34	ENSCCAG00000009364 #35
Bolivian squirrel monkey	MODERN SPECIES	63												ENSSBOG00000029283	ENSSBOG00000028588 #19	RSAD2 (ENSSBOG00000024280) #20	RNF144A (ENSSBOG00000019246) #21	ID2 (ENSSBOG00000033610) #22	KIDINS220 (ENSSBOG00000026153) #23	MBOAT2 (ENSSBOG00000034820) #24	ENSSBOG00000029937	ASAP2 (ENSSBOG00000021237) #25	ENSSBOG00000031545 #26	CPSF3 (ENSSBOG00000027263) #27	IAH1 (ENSSBOG00000019617) #28	ADAM17 (ENSSBOG00000035331) #29	ENSSBOG00000033831 ##30	TAF1B (ENSSBOG00000028943) #31	GRHL1 (ENSSBOG00000011486) #32	KLF11 (ENSSBOG00000018899) #33	ENSSBOG00000022360 #35	HPCAL1 (ENSSBOG00000026513) #36	ODC1 (ENSSBOG00000034688) #37
Mas night monkey	MODERN SPECIES	1339																ID2 (ENSANAG00000035588) #22	KIDINS220 (ENSANAG00000038069) #23	MBOAT2 (ENSANAG00000037506) #24	ENSANAG00000030828	ASAP2 (ENSANAG00000023907) #25	ENSANAG00000034926 #26	CPSF3 (ENSANAG00000031254) #27	IAH1 (ENSANAG00000033141) #28	ENSANAG00000022015	ADAM17 (ENSANAG00000037496) #29	YWHAQ (ENSANAG00000026145) ##30	TAF1B (ENSANAG00000031526) #31	GRHL1 (ENSANAG00000025191) #32	KLF11 (ENSANAG00000028728) #33	ENSANAG00000025761 #35	HPCAL1 (ENSANAG00000033383) #36
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Xenarthra	ANCESTRAL SPECIES	395																ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33
Sloth	MODERN SPECIES	12321																ID2 (ENSCHOG00000003078) #22
Armadillo	MODERN SPECIES	1449															ENSDNOG00000042784	ID2 (ENSDNOG00000035918) #22	KIDINS220 (ENSDNOG00000002905) #23	MBOAT2 (ENSDNOG00000041557) #24	ENSDNOG00000041786	ASAP2 (ENSDNOG00000008886) #25	ITGB1BP1 (ENSDNOG00000008930) #26	CPSF3 (ENSDNOG00000008940) #27	IAH1 (ENSDNOG00000009272) #28	ADAM17 (ENSDNOG00000009284) #29	ENSDNOG00000033666	TAF1B (ENSDNOG00000018268) #31	GRHL1 (ENSDNOG00000014493) #32	KLF11 (ENSDNOG00000035689) #33	ENSDNOG00000047738	ENSDNOG00000012581
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Tenrec	MODERN SPECIES	17020																ID2 (ENSETEG00000014219) #22
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b.a.a #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Elephant	MODERN SPECIES	197	PXDN (ENSLAFG00000008450)	MYT1L (ENSLAFG00000002751)	EIPR1 (ENSLAFG00000022810)	TRAPPC12 (ENSLAFG00000004900)	ADI1 (ENSLAFG00000004902)	RNASEH1 (ENSLAFG00000015091)	RPS7 (ENSLAFG00000015087)	COLEC11 (ENSLAFG00000021841)	ALLC (ENSLAFG00000013751)	ENSLAFG00000027245	ENSLAFG00000026156	SOX11 (ENSLAFG00000006327)	CMPK2 (ENSLAFG00000031856) #19	RSAD2 (ENSLAFG00000017097) #20	RNF144A (ENSLAFG00000001936) #21	ID2 (ENSLAFG00000006910) #22	KIDINS220 (ENSLAFG00000014141) #23	MBOAT2 (ENSLAFG00000008586) #24	ASAP2 (ENSLAFG00000009029) #25	ITGB1BP1 (ENSLAFG00000009036) #26	CPSF3 (ENSLAFG00000009467) #27	IAH1 (ENSLAFG00000009469) #28	ADAM17 (ENSLAFG00000009473) #29	YWHAQ (ENSLAFG00000009482) #30	TAF1B (ENSLAFG00000000782) #31	GRHL1 (ENSLAFG00000009330) #32	KLF11 (ENSLAFG00000032182) #33	ENSLAFG00000026037	RRM2 (ENSLAFG00000003627) #35	HPCAL1 (ENSLAFG00000004069) #36	ODC1 (ENSLAFG00000005330) #37
Hyrax	MODERN SPECIES	1341																ID2 (ENSPCAG00000005885) #22	KIDINS220 (ENSPCAG00000005903) #23
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00940000158104	ENSGT00940000157666	ENSGT00390000003466.c	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Tasmanian devil	MODERN SPECIES	1	PXDN (ENSSHAG00000016151)	ENSSHAG00000024001	MYT1L (ENSSHAG00000015433)	ENSSHAG00000026621	EIPR1 (ENSSHAG00000014426)	TRAPPC12 (ENSSHAG00000013794)	ADI1 (ENSSHAG00000031515)	ENSSHAG00000030451	RPS7 (ENSSHAG00000026004)	COLEC11 (ENSSHAG00000012488)	ALLC (ENSSHAG00000012095)	ENSSHAG00000011050	CMPK2 (ENSSHAG00000020558) #19	RSAD2 (ENSSHAG00000028215) #20	RNF144A (ENSSHAG00000007808) #21	ID2 (ENSSHAG00000024722) #22	KIDINS220 (ENSSHAG00000013088) #23	MBOAT2 (ENSSHAG00000012144) #24	ASAP2 (ENSSHAG00000008132) #25	ITGB1BP1 (ENSSHAG00000007675) #26	CPSF3 (ENSSHAG00000007024) #27	IAH1 (ENSSHAG00000006790) #28	ADAM17 (ENSSHAG00000006354) #29	YWHAQ (ENSSHAG00000027258) #30	TAF1B (ENSSHAG00000001155) #31	GRHL1 (ENSSHAG00000002291) #32	ENSSHAG00000005846 #33	ENSSHAG00000026867	ENSSHAG00000009991	CAPN14 (ENSSHAG00000012346)	EHD3 (ENSSHAG00000025583)
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00940000157666	ENSGT00390000003466.c	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900	ENSGT00390000004263.b.n
Wallaby	MODERN SPECIES	12603																ID2 (ENSMEUG00000008206) #22
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00940000157666	ENSGT00390000003466.c	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900	ENSGT00390000004263.b.n
Common wonbat	MODERN SPECIES	1073	ENSVURG00010010001	ENSVURG00010010012	EIPR1 (ENSVURG00010010026)	TRAPPC12 (ENSVURG00010010042)	ADI1 (ENSVURG00010010059)	ENSVURG00010010067	RPS7 (ENSVURG00010010088)	ENSVURG00010010129	ENSVURG00010010228	ENSVURG00010010246	ENSVURG00010010257	CMPK2 (ENSVURG00010010275) #19	RSAD2 (ENSVURG00010010282) #20	RNF144A (ENSVURG00010010295) #21	ENSVURG00010010311	ID2 (ENSVURG00010010332) #22	KIDINS220 (ENSVURG00010010355) #23	MBOAT2 (ENSVURG00010010400) #24
koala	MODERN SPECIES	47									SOX11 (ENSPCIG00000033221)	ENSPCIG00000001705	CMPK2 (ENSPCIG00000014961) #19	RSAD2 (ENSPCIG00000014960) #20	RNF144A (ENSPCIG00000009611) #21	ENSPCIG00000014602	ENSPCIG00000014608	ID2 (ENSPCIG00000014613) #22	KIDINS220 (ENSPCIG00000014624) #23	MBOAT2 (ENSPCIG00000014636) #24	ASAP2 (ENSPCIG00000014642) #25	ITGB1BP1 (ENSPCIG00000031637) #26	CPSF3 (ENSPCIG00000009823) #27	IAH1 (ENSPCIG00000009821) #28	ADAM17 (ENSPCIG00000009820) #29	YWHAQ (ENSPCIG00000022985) #30	GRHL1 (ENSPCIG00000009811) #32	ENSPCIG00000009814	KLF11 (ENSPCIG00000009805) #33	RRM2 (ENSPCIG00000009801) #35	HPCAL1 (ENSPCIG00000028410) #36	ODC1 (ENSPCIG00000028406) #37	NOL10 (ENSPCIG00000022730)
Opossum	MODERN SPECIES		ENSMODG00000046406	EIPR1 (ENSMODG00000014444)	TRAPPC12 (ENSMODG00000014478)	ADI1 (ENSMODG00000014484)	ENSMODG00000014491	RPS7 (ENSMODG00000014495)	ENSMODG00000041774	COLEC11 (ENSMODG00000038328)	ALLC (ENSMODG00000014520)	ENSMODG00000023196	SOX11 (ENSMODG00000036476)	CMPK2 (ENSMODG00000014578) #19	RSAD2 (ENSMODG00000042627) #20	RNF144A (ENSMODG00000014586) #21	ENSMODG00000017695	ID2 (ENSMODG00000014618) #22	ENSMODG00000048947	KIDINS220 (ENSMODG00000014660) #23	MBOAT2 (ENSMODG00000014667) #24	ASAP2 (ENSMODG00000014685) #25	ITGB1BP1 (ENSMODG00000014691) #26	ENSMODG00000038673	CPSF3 (ENSMODG00000014703) #27	IAH1 (ENSMODG00000045560) #28	ADAM17 (ENSMODG00000014726) #29	ENSMODG00000014740 #30	TAF1B (ENSMODG00000014747) #31	GRHL1 (ENSMODG00000014753) #32	KLF11 (ENSMODG00000014758) #33	ENSMODG00000014763 #35	ENSMODG00000040102
Platypus	MODERN SPECIES	84	PXDN (ENSOANG00000009860)	MYT1L (ENSOANG00000009861)	ENSOANG00000042340	EIPR1 (ENSOANG00000014791)	ENSOANG00000041529	ADI1 (ENSOANG00000015205)	ENSOANG00000050401	RPS7 (ENSOANG00000015206)	COLEC11 (ENSOANG00000044447)	ALLC (ENSOANG00000010920)	ENSOANG00000043470	SOX11 (ENSOANG00000042349)	ENSOANG00000036113 #19	RSAD2 (ENSOANG00000049844) #20	RNF144A (ENSOANG00000051094) #21	ID2 (ENSOANG00000002547) #22	KIDINS220 (ENSOANG00000007570) #23	MBOAT2 (ENSOANG00000007571) #24	ASAP2 (ENSOANG00000004708) #25	ITGB1BP1 (ENSOANG00000006950) #26	CPSF3 (ENSOANG00000008577) #27	ENSOANG00000047163 #28	ADAM17 (ENSOANG00000013331) #29
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
tuatara	MODERN SPECIES	1059											ENSSPUG00000015261	SRSF4 (ENSSPUG00000015318)	MECR (ENSSPUG00000015330)	PTPRU (ENSSPUG00000015342)	ENSSPUG00000015377	ID2 (ENSSPUG00000015382) #22	KIDINS220 (ENSSPUG00000015402) #23	MBOAT2 (ENSSPUG00000015454) #24	ASAP2 (ENSSPUG00000015478) #25	ITGB1BP1 (ENSSPUG00000015506) #26	CPSF3 (ENSSPUG00000015525) #27	IAH1 (ENSSPUG00000015596) #28	ADAM17 (ENSSPUG00000015632) #29	YWHAQ (ENSSPUG00000015663) #30	TAF1B (ENSSPUG00000015685) #31	GRHL1 (ENSSPUG00000015713) #32	KLF11 (ENSSPUG00000015734) #33	HPCAL1 (ENSSPUG00000015772) #36	ODC1 (ENSSPUG00000015782) #37	NOL10 (ENSSPUG00000015811)	ENSSPUG00000015855
Episquamata	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Common wall lizard	MODERN SPECIES	11	MYT1L (ENSPMRG00000011107)	EIPR1 (ENSPMRG00000011478)	TRAPPC12 (ENSPMRG00000011497)	ADI1 (ENSPMRG00000011510)	RNASEH1 (ENSPMRG00000011518)	RPS7 (ENSPMRG00000011523)	COLEC11 (ENSPMRG00000011530)	ALLC (ENSPMRG00000011540)	ENSPMRG00000011567	ENSPMRG00000011572	ENSPMRG00000011574	SOX11 (ENSPMRG00000011579)	CMPK2 (ENSPMRG00000011581) #19	RSAD2 (ENSPMRG00000011584) #20	RNF144A (ENSPMRG00000011590) #21	ID2 (ENSPMRG00000011594) #22	KIDINS220 (ENSPMRG00000011602) #23	MBOAT2 (ENSPMRG00000011615) #24	ASAP2 (ENSPMRG00000011623) #25	ITGB1BP1 (ENSPMRG00000011647) #26	CPSF3 (ENSPMRG00000011656) #27	IAH1 (ENSPMRG00000011668) #28	ADAM17 (ENSPMRG00000011682) #29	ENSPMRG00000011696 #30	ENSPMRG00000011699	TAF1B (ENSPMRG00000011702) #31	GRHL1 (ENSPMRG00000011712) #32	KLF11 (ENSPMRG00000011727) #33	RRM2 (ENSPMRG00000011731) #35	NOL10 (ENSPMRG00000011740)	HPCAL1 (ENSPMRG00000011758) #36
Argentine black and white tegu	MODERN SPECIES	9	ADI1 (ENSSMRG00000006539)	RNASEH1 (ENSSMRG00000006529)	RPS7 (ENSSMRG00000006525)	COLEC11 (ENSSMRG00000006522)	ALLC (ENSSMRG00000006519)	DCDC2C (ENSSMRG00000006515)	SOX11 (ENSSMRG00000006504)	ENSSMRG00000006493	ENSSMRG00000006489	ENSSMRG00000006484	ENSSMRG00000006470	CMPK2 (ENSSMRG00000006467) #19	RSAD2 (ENSSMRG00000006397) #20	RNF144A (ENSSMRG00000006394) #21	ENSSMRG00000006368	ID2 (ENSSMRG00000006348) #22	KIDINS220 (ENSSMRG00000006306) #23	MBOAT2 (ENSSMRG00000006296) #24	ASAP2 (ENSSMRG00000006275) #25	ITGB1BP1 (ENSSMRG00000006271) #26	CPSF3 (ENSSMRG00000006269) #27	IAH1 (ENSSMRG00000006268) #28	ADAM17 (ENSSMRG00000006231) #29	YWHAQ (ENSSMRG00000006227) #30	TAF1B (ENSSMRG00000006214) #31	ENSSMRG00000006208 #32	ENSSMRG00000006187 #32	KLF11 (ENSSMRG00000006180) #33	RRM2 (ENSSMRG00000006152) #35	HPCAL1 (ENSSMRG00000006133) #36	ODC1 (ENSSMRG00000006061) #37
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Lizard	MODERN SPECIES		ENSACAG00000008814	ENSACAG00000001664	CILK1 (ENSACAG00000008662)	FBXO9 (ENSACAG00000008576)	ENSACAG00000039436	ELOVL5 (ENSACAG00000008501)	GCLC (ENSACAG00000008412)	KLHL31 (ENSACAG00000008404)	ENSACAG00000036656	ENSACAG00000035511	CMPK2 (ENSACAG00000007078) #19	RSAD2 (ENSACAG00000039042) #20	RNF144A (ENSACAG00000007048) #21	ENSACAG00000039383	ENSACAG00000040261	ID2 (ENSACAG00000042556) #22	KIDINS220 (ENSACAG00000002386) #23	ENSACAG00000037631	MBOAT2 (ENSACAG00000002267) #24	ENSACAG00000041154	ASAP2 (ENSACAG00000002004) #25	ITGB1BP1 (ENSACAG00000001993) #26	CPSF3 (ENSACAG00000001759) #27	ENSACAG00000021110	IAH1 (ENSACAG00000001615) #28	ADAM17 (ENSACAG00000001356) #29	YWHAQ (ENSACAG00000001306) #30	ENSACAG00000039990	ENSACAG00000040391	ENSACAG00000040523	TAF1B (ENSACAG00000000152) #31
Elapidae	ANCESTRAL SPECIES		ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827.c #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000011297	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Indian cobra	MODERN SPECIES		PXDN (ENSNNAG00000010488)	ENSNNAG00000010544	ENSNNAG00000010563	ENSNNAG00000010615	EIPR1 (ENSNNAG00000010664)	TRAPPC12 (ENSNNAG00000010766)	ADI1 (ENSNNAG00000010852)	RNASEH1 (ENSNNAG00000010875)	RPS7 (ENSNNAG00000010947)	COLEC11 (ENSNNAG00000010989)	DCDC2C (ENSNNAG00000011041)	SOX11 (ENSNNAG00000011078)	CMPK2 (ENSNNAG00000011083) #19	RSAD2 (ENSNNAG00000011105) #20	RNF144A (ENSNNAG00000011228) #21	ID2 (ENSNNAG00000011245) #22	ENSNNAG00000011258	KIDINS220 (ENSNNAG00000011277) #23	MBOAT2 (ENSNNAG00000011525) #24	ASAP2 (ENSNNAG00000011592) #25	ITGB1BP1 (ENSNNAG00000011812) #26	ENSNNAG00000011863	CPSF3 (ENSNNAG00000011872) #27	IAH1 (ENSNNAG00000011930) #28	ADAM17 (ENSNNAG00000011958) #29	YWHAQ (ENSNNAG00000012018) #30	TAF1B (ENSNNAG00000012041) #31	GRHL1 (ENSNNAG00000012148) #32	KLF11 (ENSNNAG00000012239) #33	ENSNNAG00000012268	ENSNNAG00000012297
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827.c #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000011297	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827.c #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000011297	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Eastern brown snake	MODERN SPECIES	4	PXDN (ENSPTXG00000010013)	MYT1L (ENSPTXG00000010897)	ENSPTXG00000010903	EIPR1 (ENSPTXG00000010906)	TRAPPC12 (ENSPTXG00000010911)	ADI1 (ENSPTXG00000010914)	RNASEH1 (ENSPTXG00000010917)	RPS7 (ENSPTXG00000010919)	ENSPTXG00000010920	COLEC11 (ENSPTXG00000010922)	DCDC2C (ENSPTXG00000010924)	SOX11 (ENSPTXG00000010926)	CMPK2 (ENSPTXG00000010928) #19	RSAD2 (ENSPTXG00000010934) #20	RNF144A (ENSPTXG00000010943) #21	ID2 (ENSPTXG00000010944) #22	KIDINS220 (ENSPTXG00000010945) #23	MBOAT2 (ENSPTXG00000010950) #24	ASAP2 (ENSPTXG00000010952) #25	ITGB1BP1 (ENSPTXG00000010957) #26	CPSF3 (ENSPTXG00000010959) #27	IAH1 (ENSPTXG00000010961) #28	ADAM17 (ENSPTXG00000010969) #29	YWHAQ (ENSPTXG00000012051) #30	ENSPTXG00000012054 #31	ENSPTXG00000012055 #31	GRHL1 (ENSPTXG00000012057) #32	KLF11 (ENSPTXG00000012059) #33	MTO1 (ENSPTXG00000012060)	RRM2 (ENSPTXG00000012071) #35	HPCAL1 (ENSPTXG00000012834) #36
Mainland tiger snake	MODERN SPECIES	61												SOX11 (ENSNSUG00000020465)	CMPK2 (ENSNSUG00000020464) #19	RSAD2 (ENSNSUG00000020463) #20	RNF144A (ENSNSUG00000020462) #21	ID2 (ENSNSUG00000020460) #22	KIDINS220 (ENSNSUG00000020459) #23	MBOAT2 (ENSNSUG00000020458) #24	ENSNSUG00000020457	ASAP2 (ENSNSUG00000020456) #25	ITGB1BP1 (ENSNSUG00000020455) #26	CPSF3 (ENSNSUG00000020429) #27	IAH1 (ENSNSUG00000020427) #28	ADAM17 (ENSNSUG00000020420) #29	YWHAQ (ENSNSUG00000020419) #30	TAF1B (ENSNSUG00000020418) #31	GRHL1 (ENSNSUG00000020417) #32	KLF11 (ENSNSUG00000020416) #33	MTO1 (ENSNSUG00000020415)	RRM2 (ENSNSUG00000020414) #35	HPCAL1 (ENSNSUG00000020412) #36
Blue-lipped sea krait	MODERN SPECIES	176																ID2 (ENSLLTG00000016701) #22
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000158104.k	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000158104.k	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT01050000247847	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Three-toed box turtle	MODERN SPECIES	15	ENSTMTG00000001458	ENSTMTG00000001467	EIPR1 (ENSTMTG00000001485)	ENSTMTG00000001498	ADI1 (ENSTMTG00000001532)	RNASEH1 (ENSTMTG00000001541)	RPS7 (ENSTMTG00000001554)	COLEC11 (ENSTMTG00000001570)	ALLC (ENSTMTG00000001582)	DCDC2C (ENSTMTG00000001593)	ENSTMTG00000001613	SOX11 (ENSTMTG00000001626)	CMPK2 (ENSTMTG00000001631) #19	RSAD2 (ENSTMTG00000001639) #20	RNF144A (ENSTMTG00000001652) #21	ID2 (ENSTMTG00000001659) #22	KIDINS220 (ENSTMTG00000001670) #23	MBOAT2 (ENSTMTG00000001696) #24	ASAP2 (ENSTMTG00000001754) #25	ITGB1BP1 (ENSTMTG00000002109) #26	CPSF3 (ENSTMTG00000002118) #27	IAH1 (ENSTMTG00000002139) #28	ADAM17 (ENSTMTG00000002145) #29	YWHAQ (ENSTMTG00000002159) #30	TAF1B (ENSTMTG00000002170) #31	ENSTMTG00000002182 #32	ENSTMTG00000002187 #32	KLF11 (ENSTMTG00000002194) #33	RRM2 (ENSTMTG00000002199) #35	HPCAL1 (ENSTMTG00000002212) #36	ODC1 (ENSTMTG00000002221) #37
painted turtle	MODERN SPECIES	2390												SOX11 (ENSCPBG00000014153)	CMPK2 (ENSCPBG00000014149) #19	RSAD2 (ENSCPBG00000014146) #20	RNF144A (ENSCPBG00000014144) #21	ID2 (ENSCPBG00000014130) #22	KIDINS220 (ENSCPBG00000014107) #23	MBOAT2 (ENSCPBG00000014088) #24	ASAP2 (ENSCPBG00000014081) #25	ITGB1BP1 (ENSCPBG00000014075) #26	CPSF3 (ENSCPBG00000014074) #27	IAH1 (ENSCPBG00000014070) #28	ADAM17 (ENSCPBG00000014063) #29	YWHAQ (ENSCPBG00000014061) #30	TAF1B (ENSCPBG00000014058) #31	GRHL1 (ENSCPBG00000014054) #32	KLF11 (ENSCPBG00000014051) #33	ENSCPBG00000014048	RRM2 (ENSCPBG00000014047) #35	ATP6V1C2 (ENSCPBG00000014032)	PDIA6 (ENSCPBG00000014031)
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000158104.l	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Abingdon island giant tortoise	MODERN SPECIES	1873																ID2 (ENSCABG00000022747) #22	KIDINS220 (ENSCABG00000022761) #23	MBOAT2 (ENSCABG00000022871) #24	ASAP2 (ENSCABG00000022892) #25	ITGB1BP1 (ENSCABG00000022906) #26	CPSF3 (ENSCABG00000022908) #27
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005009323	EIPR1 (ENSGEVG00005009234)	TRAPPC12 (ENSGEVG00005009146)	ADI1 (ENSGEVG00005009115)	RNASEH1 (ENSGEVG00005009097)	RPS7 (ENSGEVG00005009060)	COLEC11 (ENSGEVG00005009003)	ALLC (ENSGEVG00005008921)	DCDC2C (ENSGEVG00005008873)	ENSGEVG00005008842	SOX11 (ENSGEVG00005008815)	ENSGEVG00005008806	CMPK2 (ENSGEVG00005008784) #19	RSAD2 (ENSGEVG00005008769) #20	RNF144A (ENSGEVG00005008742) #21	ID2 (ENSGEVG00005008728) #22	KIDINS220 (ENSGEVG00005008688) #23	MBOAT2 (ENSGEVG00005008645) #24	ASAP2 (ENSGEVG00005008532) #25	ITGB1BP1 (ENSGEVG00005008492) #26	CPSF3 (ENSGEVG00005008438) #27	IAH1 (ENSGEVG00005008414) #28	ADAM17 (ENSGEVG00005008380) #29	YWHAQ (ENSGEVG00005008366) #30	TAF1B (ENSGEVG00005008345) #31	GRHL1 (ENSGEVG00005008039) #32	KLF11 (ENSGEVG00005007934) #33	RRM2 (ENSGEVG00005007899) #35	HPCAL1 (ENSGEVG00005007881) #36	ODC1 (ENSGEVG00005007862) #37	NOL10 (ENSGEVG00005007769)
Chinese turtle	MODERN SPECIES	1137															RNF144A (ENSPSIG00000004494) #21	ID2 (ENSPSIG00000004438) #22	KIDINS220 (ENSPSIG00000017562) #23	MBOAT2 (ENSPSIG00000017486) #24	ASAP2 (ENSPSIG00000017299) #25	ITGB1BP1 (ENSPSIG00000016662) #26	CPSF3 (ENSPSIG00000016144) #27	IAH1 (ENSPSIG00000015583) #28	ADAM17 (ENSPSIG00000013693) #29	YWHAQ (ENSPSIG00000012692) #30	TAF1B (ENSPSIG00000012081) #31	GRHL1 (ENSPSIG00000010930) #32	KLF11 (ENSPSIG00000010816) #33	RRM2 (ENSPSIG00000009363) #35
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Australian saltwater crocodile	MODERN SPECIES	38	ENSCPRG00005008598	EIPR1 (ENSCPRG00005008594)	TRAPPC12 (ENSCPRG00005008576)	ENSCPRG00005008559	RNASEH1 (ENSCPRG00005008555)	ENSCPRG00005008536	ENSCPRG00005008530	COLEC11 (ENSCPRG00005008511)	ALLC (ENSCPRG00005008494)	DCDC2C (ENSCPRG00005008489)	SOX11 (ENSCPRG00005008466)	CMPK2 (ENSCPRG00005008440) #19	RSAD2 (ENSCPRG00005008433) #20	RNF144A (ENSCPRG00005008430) #21	UBE2F (ENSCPRG00005008370)	ID2 (ENSCPRG00005008324) #22	KIDINS220 (ENSCPRG00005007277) #23	MBOAT2 (ENSCPRG00005007103) #24	ASAP2 (ENSCPRG00005007065) #25	ITGB1BP1 (ENSCPRG00005007062) #26	CPSF3 (ENSCPRG00005007046) #27	IAH1 (ENSCPRG00005007037) #28	ADAM17 (ENSCPRG00005006916) #29	ENSCPRG00005006866 ##30	YWHAQ (ENSCPRG00005006856) #30	TAF1B (ENSCPRG00005006808) #31	GRHL1 (ENSCPRG00005006677) #32	KLF11 (ENSCPRG00005006661) #33	RRM2 (ENSCPRG00005006653) #35	HPCAL1 (ENSCPRG00005006636) #36	ODC1 (ENSCPRG00005006625) #37
Aves	ANCESTRAL SPECIES	10	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Neognathae	ANCESTRAL SPECIES	2	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Anatidae	ANCESTRAL SPECIES		ENSGT01050000245791	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623.a #25	ENSGT00390000003990 #26	ENSGT00940000155699.h #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Duck	MODERN SPECIES	21	TPO (ENSAPLG00000015727)	PXDN (ENSAPLG00000015757)	MYT1L (ENSAPLG00000016052)	ENSAPLG00000031076	EIPR1 (ENSAPLG00000016100)	TRAPPC12 (ENSAPLG00000000576)	ADI1 (ENSAPLG00000001901)	RNASEH1 (ENSAPLG00000001961)	RPS7 (ENSAPLG00000002438)	COLEC11 (ENSAPLG00000025748)	SOX11 (ENSAPLG00000025127)	ENSAPLG00000017954	ENSAPLG00000022011	RSAD2 (ENSAPLG00000006016) #20	RNF144A (ENSAPLG00000006187) #21	ID2 (ENSAPLG00000020880) #22	KIDINS220 (ENSAPLG00000015856) #23	MBOAT2 (ENSAPLG00000015705) #24	ASAP2 (ENSAPLG00000006573) #25	ITGB1BP1 (ENSAPLG00000006929) #26	CPSF3 (ENSAPLG00000006941) #27	IAH1 (ENSAPLG00000007422) #28	ADAM17 (ENSAPLG00000007716) #29	YWHAQ (ENSAPLG00000023697) #30	TAF1B (ENSAPLG00000008537) #31	GRHL1 (ENSAPLG00000008667) #32	KLF11 (ENSAPLG00000009146) #33	ENSAPLG00000030281	RRM2 (ENSAPLG00000009301) #35	ODC1 (ENSAPLG00000009531) #37	NOL10 (ENSAPLG00000009885)
Pink-footed goose	MODERN SPECIES	48				ENSABRG00000009007	TRAPPC12 (ENSABRG00000009014)	ADI1 (ENSABRG00000009028)	RNASEH1 (ENSABRG00000009041)	RPS7 (ENSABRG00000009056)	COLEC11 (ENSABRG00000009065)	SOX11 (ENSABRG00000009128)	CMPK2 (ENSABRG00000009165) #19	RSAD2 (ENSABRG00000009173) #20	RNF144A (ENSABRG00000009186) #21	ENSABRG00000009192	ENSABRG00000009198	ID2 (ENSABRG00000009225) #22	KIDINS220 (ENSABRG00000009278) #23	MBOAT2 (ENSABRG00000009397) #24	ASAP2 (ENSABRG00000009432) #25	ITGB1BP1 (ENSABRG00000009505) #26	CPSF3 (ENSABRG00000009595) #27	IAH1 (ENSABRG00000010649) #28	ADAM17 (ENSABRG00000010665) #29	YWHAQ (ENSABRG00000010695) #30	TAF1B (ENSABRG00000010705) #31	GRHL1 (ENSABRG00000010717) #32	KLF11 (ENSABRG00000010724) #33	RRM2 (ENSABRG00000010731) #35	HPCAL1 (ENSABRG00000010754) #36	ODC1 (ENSABRG00000010758) #37	NOL10 (ENSABRG00000010777)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Japanese quail	MODERN SPECIES	21	ENSCJPG00005008187	SNTG2 (ENSCJPG00005008231)	TPO (ENSCJPG00005008232)	PXDN (ENSCJPG00005008255)	MYT1L (ENSCJPG00005008311)	EIPR1 (ENSCJPG00005008562)	TRAPPC12 (ENSCJPG00005008564)	ADI1 (ENSCJPG00005008568)	RNASEH1 (ENSCJPG00005008569)	RPS7 (ENSCJPG00005008570)	COLEC11 (ENSCJPG00005008571)	SOX11 (ENSCJPG00005008603)	CMPK2 (ENSCJPG00005008614) #19	RSAD2 (ENSCJPG00005008615) #20	RNF144A (ENSCJPG00005008634) #21	Id2 (ENSCJPG00005008665) #22	KIDINS220 (ENSCJPG00005008683) #23	MBOAT2 (ENSCJPG00005011009) #24	ASAP2 (ENSCJPG00005011015) #25	ITGB1BP1 (ENSCJPG00005011017) #26	CPSF3 (ENSCJPG00005011027) #27	IAH1 (ENSCJPG00005011028) #28	ADAM17 (ENSCJPG00005011030) #29	YWHAQ (ENSCJPG00005011031) #30	TAF1B (ENSCJPG00005011032) #31	GRHL1 (ENSCJPG00005011034) #32	KLF11 (ENSCJPG00005011036) #33	ENSCJPG00005011037	RRM2 (ENSCJPG00005011038) #35	HPCAL1 (ENSCJPG00005011043) #36	ODC1 (ENSCJPG00005011044) #37
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Chicken	MODERN SPECIES	22	SNTG2 (ENSGALG00010002324)	TPO (ENSGALG00010002300)	PXDN (ENSGALG00010003388)	MYT1L (ENSGALG00010002390)	TSSC1 (ENSGALG00010002413)	TRAPPC12 (ENSGALG00010002422)	ADI1 (ENSGALG00010003471)	RNASEH1 (ENSGALG00010002291)	RPS7 (ENSGALG00010003474)	COLEC11 (ENSGALG00010003478)	SOX11 (ENSGALG00010003543)	CMPK2 (ENSGALG00010002380) #19	RSAD2 (ENSGALG00010003583) #20	RNF144A (ENSGALG00010003597) #21	ENSGALG00010003853	ID2 (ENSGALG00010003117) #22	KIDINS220 (ENSGALG00010003160) #23	MBOAT2 (ENSGALG00010003201) #24	ASAP2 (ENSGALG00010003242) #25	ENSGALG00010003244	ITGB1BP1 (ENSGALG00010003253) #26	CPSF3 (ENSGALG00010003272) #27	IAH1 (ENSGALG00010003295) #28	ADAM17 (ENSGALG00010003348) #29	YWHAQ (ENSGALG00010003375) #30	TAF1B (ENSGALG00010004230) #31	GRHL1 (ENSGALG00010002433) #32	KLF11 (ENSGALG00010002444) #33	RRM2 (ENSGALG00010002462) #35	HPCAL1 (ENSGALG00010002474) #36	ODC (ENSGALG00010003604) #37
Turkey	MODERN SPECIES	11	ENSMGAG00000020117	ENSMGAG00000014011 #37	ENSMGAG00000014010 #36	ENSMGAG00000014009 #35	ENSMGAG00000014008 #33	ENSMGAG00000017891 #32	ENSMGAG00000014007 #32	TAF1B (ENSMGAG00000014006) #31	ENSMGAG00000018898 ##30	ENSMGAG00000014000 #29	ENSMGAG00000014004 #30	CPSF3 (ENSMGAG00000013995) #27	ENSMGAG00000013988 #25	ENSMGAG00000013993 #26	ENSMGAG00000017593	ID2 (ENSMGAG00000013985) #22	ENSMGAG00000013984 #21	ENSMGAG00000019604 #20	ENSMGAG00000013982 #19	ENSMGAG00000019338	ENSMGAG00000013980	RPS7 (ENSMGAG00000013978)	ENSMGAG00000013979	ENSMGAG00000013977	ENSMGAG00000013975	ENSMGAG00000013974	TRIB2 (ENSMGAG00000019802)	LRATD1 (ENSMGAG00000022775)	NBAS (ENSMGAG00000014024)	DDX1 (ENSMGAG00000014025)	ENSMGAG00000022947
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612.p #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Flycatcher	MODERN SPECIES	21	PXDN (ENSFALG00000002037)	MYT1L (ENSFALG00000002053)	ENSFALG00000026193	EIPR1 (ENSFALG00000002059)	TRAPPC12 (ENSFALG00000002062)	ADI1 (ENSFALG00000028712)	RNASEH1 (ENSFALG00000027698)	RPS7 (ENSFALG00000024743)	COLEC11 (ENSFALG00000002076)	ENSFALG00000024355	SOX11 (ENSFALG00000014554)	ENSFALG00000025049	CMPK2 (ENSFALG00000023392) #19	RSAD2 (ENSFALG00000006483) #20	RNF144A (ENSFALG00000027037) #21	ID2 (ENSFALG00000006518) #22	KIDINS220 (ENSFALG00000006522) #23	MBOAT2 (ENSFALG00000006544) #24	ASAP2 (ENSFALG00000006556) #25	ITGB1BP1 (ENSFALG00000026175) #26	CPSF3 (ENSFALG00000006572) #27	IAH1 (ENSFALG00000006579) #28	ADAM17 (ENSFALG00000006611) #29	YWHAQ (ENSFALG00000023362) #30	TAF1B (ENSFALG00000006636) #31	GRHL1 (ENSFALG00000006639) #32	KLF11 (ENSFALG00000006648) #33	ENSFALG00000027922	RRM2 (ENSFALG00000022902) #35	HPCAL1 (ENSFALG00000006653) #36	ODC1 (ENSFALG00000006656) #37
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT01000000221873	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612.p #32	ENSGT00940000157612.o #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612.o #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Zebra finch	MODERN SPECIES	23	ACP1 (ENSTGUG00000027759)	ALKAL2 (ENSTGUG00000012951)	SNTG2 (ENSTGUG00000012954)	TPO (ENSTGUG00000012960)	PXDN (ENSTGUG00000012962)	MYT1L (ENSTGUG00000012971)	EIPR1 (ENSTGUG00000012973)	TRAPPC12 (ENSTGUG00000012974)	RNASEH1 (ENSTGUG00000012980)	RPS7 (ENSTGUG00000012983)	COLEC11 (ENSTGUG00000022930)	SOX11 (ENSTGUG00000012987)	ENSTGUG00000022230	RSAD2 (ENSTGUG00000012992) #20	RNF144A (ENSTGUG00000022180) #21	ID2 (ENSTGUG00000012998) #22	KIDINS220 (ENSTGUG00000012999) #23	MBOAT2 (ENSTGUG00000013004) #24	ASAP2 (ENSTGUG00000013006) #25	ITGB1BP1 (ENSTGUG00000013015) #26	CPSF3 (ENSTGUG00000013016) #27	IAH1 (ENSTGUG00000013025) #28	ADAM17 (ENSTGUG00000013028) #29	YWHAQ (ENSTGUG00000013035) #30	TAF1B (ENSTGUG00000013037) #31	GRHL1 (ENSTGUG00000013038) #32	KLF11 (ENSTGUG00000013041) #33	RRM2 (ENSTGUG00000013042) #35	HPCAL1 (ENSTGUG00000013044) #36	ODC1 (ENSTGUG00000013045) #37	NOL10 (ENSTGUG00000013047)
Common canary	MODERN SPECIES	1	ALKAL2 (ENSSCAG00000011763)	TMEM18 (ENSSCAG00000011774)	SNTG2 (ENSSCAG00000011777)	TPO (ENSSCAG00000011790)	PXDN (ENSSCAG00000011834)	MYT1L (ENSSCAG00000012053)	EIPR1 (ENSSCAG00000012104)	TRAPPC12 (ENSSCAG00000012110)	ADI1 (ENSSCAG00000012116)	RNASEH1 (ENSSCAG00000012122)	RPS7 (ENSSCAG00000012160)	COLEC11 (ENSSCAG00000012167)	ENSSCAG00000012187	RSAD2 (ENSSCAG00000012190) #20	RNF144A (ENSSCAG00000012205) #21	ID2 (ENSSCAG00000012234) #22	KIDINS220 (ENSSCAG00000012242) #23	MBOAT2 (ENSSCAG00000012256) #24	ASAP2 (ENSSCAG00000012272) #25	ITGB1BP1 (ENSSCAG00000012285) #26	CPSF3 (ENSSCAG00000012290) #27	IAH1 (ENSSCAG00000012295) #28	ADAM17 (ENSSCAG00000012301) #29	YWHAQ (ENSSCAG00000012308) #30	GRHL1 (ENSSCAG00000012341) #32	KLF11 (ENSSCAG00000012362) #33	RRM2 (ENSSCAG00000012371) #35	HPCAL1 (ENSSCAG00000012381) #36	ODC1 (ENSSCAG00000012395) #37	NOL10 (ENSSCAG00000012402)	ATP6V1C2 (ENSSCAG00000012422)
Medium ground finch	MODERN SPECIES	21													ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473) #20	RNF144A (ENSGFOG00000008461) #21	ID2 (ENSGFOG00000008458) #22	KIDINS220 (ENSGFOG00000008427) #23	MBOAT2 (ENSGFOG00000008417) #24	ASAP2 (ENSGFOG00000008371) #25	ITGB1BP1 (ENSGFOG00000008352) #26	ENSGFOG00000008345 #27	ENSGFOG00000008332 #27	IAH1 (ENSGFOG00000008321) #28	ADAM17 (ENSGFOG00000008025) #29	YWHAQ (ENSGFOG00000007990) #30	TAF1B (ENSGFOG00000007971) #31	ENSGFOG00000007959 #32	ENSGFOG00000007956 #32	KLF11 (ENSGFOG00000007951) #33	RRM2 (ENSGFOG00000007690) #35	HPCAL1 (ENSGFOG00000007664) #36
Great tit	MODERN SPECIES	22	SNTG2 (ENSPMJG00000010031)	TPO (ENSPMJG00000010034)	PXDN (ENSPMJG00000010047)	MYT1L (ENSPMJG00000010070)	ENSPMJG00000010238	EIPR1 (ENSPMJG00000010339)	TRAPPC12 (ENSPMJG00000010410)	ADI1 (ENSPMJG00000010411)	RNASEH1 (ENSPMJG00000010412)	RPS7 (ENSPMJG00000010413)	COLEC11 (ENSPMJG00000010415)	SOX11 (ENSPMJG00000010517)	CMPK2 (ENSPMJG00000010562) #19	RSAD2 (ENSPMJG00000010563) #20	RNF144A (ENSPMJG00000010564) #21	ID2 (ENSPMJG00000010632) #22	KIDINS220 (ENSPMJG00000010635) #23	MBOAT2 (ENSPMJG00000010666) #24	ASAP2 (ENSPMJG00000010679) #25	ITGB1BP1 (ENSPMJG00000012392) #26	CPSF3 (ENSPMJG00000012393) #27	IAH1 (ENSPMJG00000012394) #28	ADAM17 (ENSPMJG00000012400) #29	YWHAQ (ENSPMJG00000012403) #30	TAF1B (ENSPMJG00000012405) #31	GRHL1 (ENSPMJG00000012412) #32	KLF11 (ENSPMJG00000012416) #33	RRM2 (ENSPMJG00000012420) #35	HPCAL1 (ENSPMJG00000012424) #36	ODC1 (ENSPMJG00000012426) #37	NOL10 (ENSPMJG00000012429)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00390000015191	ENSGT00950000182863.B.b	ENSGT00940000158104	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Kakapo	MODERN SPECIES	23	ENSSHBG00005021319	TMEM18 (ENSSHBG00005021320)	SNTG2 (ENSSHBG00005021323)	TPO (ENSSHBG00005021326)	PXDN (ENSSHBG00005000592)	MYT1L (ENSSHBG00005000594)	EIPR1 (ENSSHBG00005000602)	TRAPPC12 (ENSSHBG00005000603)	ADI1 (ENSSHBG00005006001)	RNASEH1 (ENSSHBG00005006018)	RPS7 (ENSSHBG00005006046)	COLEC11 (ENSSHBG00005006078)	ENSSHBG00005006101	RSAD2 (ENSSHBG00005006118) #20	RNF144A (ENSSHBG00005006232) #21	ID2 (ENSSHBG00005006245) #22	KIDINS220 (ENSSHBG00005006291) #23	MBOAT2 (ENSSHBG00005006345) #24	ASAP2 (ENSSHBG00005006393) #25	ITGB1BP1 (ENSSHBG00005006432) #26	CPSF3 (ENSSHBG00005006481) #27	IAH1 (ENSSHBG00005006527) #28	ADAM17 (ENSSHBG00005006619) #29	YWHAQ (ENSSHBG00005006806) #30	TAF1B (ENSSHBG00005006841) #31	ENSSHBG00005006892 #32	ENSSHBG00005006922 #32	KLF11 (ENSSHBG00005006947) #33	RRM2 (ENSSHBG00005006975) #35	HPCAL1 (ENSSHBG00005007002) #36	ODC1 (ENSSHBG00005007026) #37
Golden eagle	MODERN SPECIES	6	SNTG2 (ENSACCG00020005652)	TPO (ENSACCG00020005486)	PXDN (ENSACCG00020005284)	MYT1L (ENSACCG00020005045)	EIPR1 (ENSACCG00020004841)	TRAPPC12 (ENSACCG00020004825)	ADI1 (ENSACCG00020004813)	RNASEH1 (ENSACCG00020004806)	RPS7 (ENSACCG00020004797)	COLEC11 (ENSACCG00020004791)	SOX11 (ENSACCG00020004781)	CMPK2 (ENSACCG00020004778) #19	RSAD2 (ENSACCG00020004774) #20	RNF144A (ENSACCG00020004762) #21	ENSACCG00020004746	ID2 (ENSACCG00020004736) #22	KIDINS220 (ENSACCG00020014291) #23	MBOAT2 (ENSACCG00020014234) #24	ASAP2 (ENSACCG00020013669) #25	ITGB1BP1 (ENSACCG00020012708) #26	CPSF3 (ENSACCG00020012650) #27	IAH1 (ENSACCG00020012620) #28	ADAM17 (ENSACCG00020012584) #29	YWHAQ (ENSACCG00020012565) #30	TAF1B (ENSACCG00020012536) #31	ENSACCG00020012519 #32	KLF11 (ENSACCG00020012500) #33	RRM2 (ENSACCG00020012338) #35	HPCAL1 (ENSACCG00020012207) #36	ODC1 (ENSACCG00020012187) #37	NOL10 (ENSACCG00020012136)
African ostrich	MODERN SPECIES	883																ID2 (ENSSCUG00000016689) #22
Anura	ANCESTRAL SPECIES	32							ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.b #30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982 #33	ENSGT00390000013305.a.a #35	ENSGT00940000154645.A #36	ENSGT00950000182995.e.a.a.a #37	ENSGT00390000007900
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000024324	HPCAL1 (ENSLLEG00000024240) #36	ENSLLEG00000024218	ODC1 (ENSLLEG00000023958) #37	NOL10 (ENSLLEG00000023018)	ATP6V1C2 (ENSLLEG00000022849)	PDIA6 (ENSLLEG00000022642)	ENSLLEG00000022599	KCNF1 (ENSLLEG00000022578)	ENSLLEG00000022561	RNF144A (ENSLLEG00000022290) #21	RSAD2 (ENSLLEG00000022201) #20	ENSLLEG00000022143 #19	ENSLLEG00000022123	ENSLLEG00000022091	ID2 (ENSLLEG00000021970) #22	ENSLLEG00000021946	ENSLLEG00000021889	KIDINS220 (ENSLLEG00000021372) #23	MBOAT2 (ENSLLEG00000021230) #24	ASAP2 (ENSLLEG00000019352) #25	ENSLLEG00000019276	ITGB1BP1 (ENSLLEG00000019225) #26	CPSF3 (ENSLLEG00000018593) #27	IAH1 (ENSLLEG00000018504) #28	ENSLLEG00000018485	ADAM17 (ENSLLEG00000017494) #29	YWHAQ (ENSLLEG00000017369) #30	ENSLLEG00000017339	TAF1B (ENSLLEG00000016913) #31	GRHL1 (ENSLLEG00000016275) #32
Frog	MODERN SPECIES	5	eipr1 (ENSXETG00000006962)	trappc12 (ENSXETG00000006961)	ENSXETG00000045138	ENSXETG00000043059	rnaseh1 (ENSXETG00000030371)	rps7 (ENSXETG00000001209)	colec11 (ENSXETG00000001204)	allc (ENSXETG00000001201)	ENSXETG00000042475	sox11 (ENSXETG00000038964)	ENSXETG00000042607	cmpk2 (ENSXETG00000023437) #19	ENSXETG00000046085	rsad2 (ENSXETG00000023435) #20	rnf144a (ENSXETG00000023433) #21	id2 (ENSXETG00000040416) #22	kidins220 (ENSXETG00000008271) #23	mboat2 (ENSXETG00000036035) #24	asap2 (ENSXETG00000008265) #25	itgb1bp1 (ENSXETG00000008264) #26	cpsf3 (ENSXETG00000008263) #27	iah1 (ENSXETG00000026506) #28	adam17 (ENSXETG00000008262) #29	ywhaq (ENSXETG00000007010) #30	taf1b (ENSXETG00000007011) #31	grhl1 (ENSXETG00000007012) #32	klf11 (ENSXETG00000007013) #33	MGC147302 (ENSXETG00000031276)	rrm2.2 (ENSXETG00000036052) #35	ENSXETG00000043226	hpcal1 (ENSXETG00000003521) #36
Coelacanth	MODERN SPECIES	916																ID2 (ENSLACG00000007447) #22	KIDINS220 (ENSLACG00000004696) #23	MBOAT2 (ENSLACG00000022275) #24
Actinopterygii	ANCESTRAL SPECIES	161	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155734	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.a ##30	ENSGT00440000033827 #31
Reedfish	MODERN SPECIES	11	ankef1a (ENSECRG00000010510)	PXDN (ENSECRG00000010492)	myt1la (ENSECRG00000010398)	eipr1 (ENSECRG00000010355)	trappc12 (ENSECRG00000010315)	adi1 (ENSECRG00000010303)	rnaseh1 (ENSECRG00000010293)	rps7 (ENSECRG00000010266)	colec11 (ENSECRG00000010258)	allc (ENSECRG00000010240)	ENSECRG00000010212	sox11a (ENSECRG00000010200)	CMPK2 (ENSECRG00000010193) #19	rsad2 (ENSECRG00000010187) #20	rnf144aa (ENSECRG00000010177) #21	id2a (ENSECRG00000010167) #22	kidins220b (ENSECRG00000010109) #23	mboat2b (ENSECRG00000010060) #24	e2f6 (ENSECRG00000010036)	asap2a (ENSECRG00000009968) #25	itgb1bp1 (ENSECRG00000009944) #26	cpsf3 (ENSECRG00000009905) #27	iah1 (ENSECRG00000009882) #28	ywhaqb (ENSECRG00000009863) ##30	adam17a (ENSECRG00000009845) #29	taf1b (ENSECRG00000009821) #31	grhl1 (ENSECRG00000009767) #32	klf11a (ENSECRG00000009752) #33	rrm2 (ENSECRG00000009736) #35	ENSECRG00000009725	ENSECRG00000009717
Neopterygii	ANCESTRAL SPECIES	150	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714 #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #24	ENSGT00940000155734	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699 #27	ENSGT00390000008069 #28	ENSGT00940000155443 #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31
Spotted gar	MODERN SPECIES	647	angel2 (ENSLOCG00000016793)	ENSLOCG00000016794	slc30a10 (ENSLOCG00000016795)	olfcb1 (ENSLOCG00000016796)	ENSLOCG00000016797	ENSLOCG00000016799	ENSLOCG00000016801	zgc:112001 (ENSLOCG00000018007)	ENSLOCG00000016802	LRFN2 (ENSLOCG00000016804)	ENSLOCG00000016805	sox11a (ENSLOCG00000018008)	CMPK2 (ENSLOCG00000016807) #19	rsad2 (ENSLOCG00000016810) #20	rnf144aa (ENSLOCG00000016812) #21	id2a (ENSLOCG00000016814) #22	kidins220b (ENSLOCG00000016815) #23	mboat2b (ENSLOCG00000016816) #24	e2f6 (ENSLOCG00000016817)	asap2a (ENSLOCG00000016818) #25	itgb1bp1 (ENSLOCG00000016822) #26	cpsf3 (ENSLOCG00000016823) #27	iah1 (ENSLOCG00000016826) #28	adam17a (ENSLOCG00000016828) #29	ywhaqa (ENSLOCG00000016833) ##30	taf1b (ENSLOCG00000016834) #31	grhl1 (ENSLOCG00000016835) #32	klf11a (ENSLOCG00000016837) #33	rrm2 (ENSLOCG00000016838) #35	LGALS8 (ENSLOCG00000016840)	zdhhc14 (ENSLOCG00000016842)
Osteoglossocephalai	ANCESTRAL SPECIES	69	ENSGT00940000153511.b.r	ENSGT00940000173663	ENSGT00950000182856.a.b.b	ENSGT00530000063775	ENSGT00390000013856	ENSGT01010000222287.B.b.a.b.b.a	ENSGT00530000063503.a.b.g.a	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00940000155699 #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00800000125320
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	161																ENSGT00940000156464.q #22	ENSGT00940000156714.a #23	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.m.a.a ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00940000156483.h.a	ENSGT00940000155634.q.a	ENSGT00940000160501	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252.g
P. kingsleyae	MODERN SPECIES	34	nenf (ENSPKIG00000019926)	tagapa (ENSPKIG00000019949)	ezra (ENSPKIG00000020002)	SYNCRIP (ENSPKIG00000020066)	SNX14 (ENSPKIG00000020125)	HTR1B (ENSPKIG00000020198)	ENSPKIG00000020228	myo6b (ENSPKIG00000020283)	colec11 (ENSPKIG00000020364)	ENSPKIG00000020407	ENSPKIG00000020425	sox11a (ENSPKIG00000020439)	CMPK2 (ENSPKIG00000020457) #19	rsad2 (ENSPKIG00000020478) #20	rnf144aa (ENSPKIG00000020505) #21	id2a (ENSPKIG00000020522) #22	KIDINS220 (ENSPKIG00000020621) #23	ENSPKIG00000020786	ENSPKIG00000020807 #24	asap2a (ENSPKIG00000020857) #25	itgb1bp1 (ENSPKIG00000020930) #26	iah1 (ENSPKIG00000020955) #28
Asian bonytongue	MODERN SPECIES	6	TULP4 (ENSSFOG00015011110)	slc18b1 (ENSSFOG00015011056)	MYB (ENSSFOG00015026908)	ahi1 (ENSSFOG00015010997)	cga (ENSSFOG00015010973)	SYNCRIP (ENSSFOG00015010922)	SNX14 (ENSSFOG00015010812)	HTR1D (ENSSFOG00015010780)	ENSSFOG00015010726	colec11 (ENSSFOG00015010703)	ENSSFOG00015010662	sox11a (ENSSFOG00015010614)	CMPK2 (ENSSFOG00015010604) #19	rsad2 (ENSSFOG00015010483) #20	rnf144aa (ENSSFOG00015024957) #21	id2a (ENSSFOG00015010444) #22	KIDINS220 (ENSSFOG00015010248) #23	MBOAT2 (ENSSFOG00015010179) #24	asap2a (ENSSFOG00015010154) #25	itgb1bp1 (ENSSFOG00015010133) #26	iah1 (ENSSFOG00015010115) #28	adam17a (ENSSFOG00015010069) #29	ywhaqb (ENSSFOG00015010045) ##30	grhl1 (ENSSFOG00015009961) #32	klf11b (ENSSFOG00015009926) #33	ZDHHC14 (ENSSFOG00015009868)	ARID1B (ENSSFOG00015009783)	CLDN20 (ENSSFOG00015024629)	tfb1m (ENSSFOG00015009739)	TIAM2 (ENSSFOG00015009593)	SCAF8 (ENSSFOG00015009481)
Osteoglossiformes	ANCESTRAL SPECIES	11				ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464.r #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000155699 #27	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000155727.o.a	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00530000063946.b.f
P. kingsleyae	MODERN SPECIES	209	ENSPKIG00000003711	ppp1cb (ENSPKIG00000003682)	bpnt1 (ENSPKIG00000003629)	saysd1 (ENSPKIG00000003596)	DLGAP2 (ENSPKIG00000003576)	KBTBD11 (ENSPKIG00000003531)	ccr6a (ENSPKIG00000003522)	cep43 (ENSPKIG00000003393)	myt1la (ENSPKIG00000003245)	rnaseh1 (ENSPKIG00000003146)	rps7 (ENSPKIG00000003098)	allc (ENSPKIG00000003010)	sox11b (ENSPKIG00000002960)	ENSPKIG00000002921 #21	ENSPKIG00000002904	ID2 (ENSPKIG00000002890) #22	kidins220b (ENSPKIG00000002619) #23	mboat2b (ENSPKIG00000002445) #24	ENSPKIG00000002405	e2f6 (ENSPKIG00000002387)	ENSPKIG00000002380	ASAP2 (ENSPKIG00000002286) #25	ENSPKIG00000002214
Asian bonytongue	MODERN SPECIES		ENSSFOG00015031145	bpnt1 (ENSSFOG00015003383)	DNAH8 (ENSSFOG00015003101)	saysd1 (ENSSFOG00015030658)	DLGAP2 (ENSSFOG00015003045)	KBTBD11 (ENSSFOG00015003031)	ccr6a (ENSSFOG00015003027)	cep43 (ENSSFOG00015002963)	zgc:113142 (ENSSFOG00015002820)	myt1la (ENSSFOG00015002763)	rnaseh1 (ENSSFOG00015002709)	rps7 (ENSSFOG00015032644)	allc (ENSSFOG00015002644)	sox11b (ENSSFOG00015002596)	ENSSFOG00015002564 #21	ID2 (ENSSFOG00015002554) #22	kidins220b (ENSSFOG00015002438) #23	kidins220b (ENSSFOG00015024902) #23	mboat2b (ENSSFOG00015002370) #24	e2f6 (ENSSFOG00015002345)	ASAP2 (ENSSFOG00015002216) #25	cpsf3 (ENSSFOG00015002108) #27	ENSSFOG00015027678 ##30	taf1b (ENSSFOG00015002036) #31	ENSSFOG00015001947	rrm2 (ENSSFOG00015001895) #35	LGALS8 (ENSSFOG00015001836)	zdhhc14 (ENSSFOG00015001736)	TMEM242 (ENSSFOG00015033036)	arid1b (ENSSFOG00015001640)	CLDN20 (ENSSFOG00015001626)
Clupeocephala	ANCESTRAL SPECIES	1	ENSGT01030000234513.A.a.b	ENSGT00950000183034.C.a.a	ENSGT01010000222287.B.b.a.a.b	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT00530000063503.a.b.g.a	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000155727.o.b
Otomorpha	ANCESTRAL SPECIES	77	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00940000155724.q	ENSGT00940000156078.c	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00940000155734	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000156714.b #23	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642
Clupeiformes	ANCESTRAL SPECIES	148	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00940000155724.q	ENSGT00940000156078.c	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.m.a.a ##30	ENSGT00940000155982.e.a #33
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	6	prep (ENSCHAG00000025117)	ENSCHAG00000025209	xkr5a (ENSCHAG00000025213)	tram2 (ENSCHAG00000025217)	efhc1 (ENSCHAG00000025291)	ENSCHAG00000025313	ENSCHAG00000025325	ENSCHAG00000025330	mrpl19 (ENSCHAG00000025333)	itsn2a (ENSCHAG00000025403)	ENSCHAG00000026148	GNPAT (ENSCHAG00000026157)	mxg (ENSCHAG00000026181)	LPIN1 (ENSCHAG00000026202)	si:ch73-21k16.4 (ENSCHAG00000026246)	id2b (ENSCHAG00000026250) #22	kidins220b (ENSCHAG00000026256) #23	spint1b (ENSCHAG00000026334)	rbp2a (ENSCHAG00000026337)	ENSCHAG00000026342	ENSCHAG00000026351	CEP170B (ENSCHAG00000026354)	AKT1 (ENSCHAG00000026369)	HMBOX1 (ENSCHAG00000026418)	ints9 (ENSCHAG00000026434)	extl3 (ENSCHAG00000002367)	riox1 (ENSCHAG00000002553)	NDUFB1 (ENSCHAG00000003539)	cpsf2 (ENSCHAG00000003572)	ENSCHAG00000004655	SLC24A4 (ENSCHAG00000004667)
Atlantic herring	MODERN SPECIES	5	znf292a (ENSCHAG00000007702)	cga (ENSCHAG00000007724)	HTR1E (ENSCHAG00000007972)	syncripl (ENSCHAG00000008003)	SNX14 (ENSCHAG00000008637)	ENSCHAG00000009818	myo6b (ENSCHAG00000009880)	ENSCHAG00000010324	HTR1B (ENSCHAG00000010400)	colec11 (ENSCHAG00000010426)	ENSCHAG00000010436	sox11a (ENSCHAG00000010481)	CMPK2 (ENSCHAG00000010493) #19	rsad2 (ENSCHAG00000010530) #20	rnf144aa (ENSCHAG00000010536) #21	id2a (ENSCHAG00000010550) #22	KIDINS220 (ENSCHAG00000010596) #23	MBOAT2 (ENSCHAG00000011085) #24	asap2a (ENSCHAG00000011321) #25	itgb1bp1 (ENSCHAG00000013894) #26	iah1 (ENSCHAG00000013918) #28	adam17a (ENSCHAG00000013963) #29	ywhaqb (ENSCHAG00000015822) ##30	grhl1 (ENSCHAG00000015880) #32	klf11b (ENSCHAG00000016390) #33	tonsl (ENSCHAG00000016424)	nkl.4 (ENSCHAG00000017239)	ENSCHAG00000017246	ENSCHAG00000017279	STAC (ENSCHAG00000017302)	mtfr1l (ENSCHAG00000017382)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	5	rab10 (ENSDCDG00000005493)	KIF3C (ENSDCDG00000005497)	dtnba (ENSDCDG00000005514)	dnmt3aa (ENSDCDG00000009632)	dpysl5b (ENSDCDG00000014792)	mapre3b (ENSDCDG00000014825)	tmem214 (ENSDCDG00000014867)	tram2 (ENSDCDG00000016300)	efhc1 (ENSDCDG00000016326)	ENSDCDG00000016329	mrpl19 (ENSDCDG00000016333)	itsn2a (ENSDCDG00000016359)	GNPAT (ENSDCDG00000016416)	LPIN1 (ENSDCDG00000016421)	si:ch73-21k16.4 (ENSDCDG00000016426)	ENSDCDG00000016431 #22	kidins220b (ENSDCDG00000016437) #23	spint1b (ENSDCDG00000016500)	KIF1A (ENSDCDG00000016697)	agxtb (ENSDCDG00000019685)	tmem63a (ENSDCDG00000019828)	prkchb (ENSDCDG00000021886)	hif1ab (ENSDCDG00000021912)	tmem121ab (ENSDCDG00000022232)	SLC24A4 (ENSDCDG00000022244)	cpsf2 (ENSDCDG00000022249)	NDUFB1 (ENSDCDG00000022255)	riox1 (ENSDCDG00000022267)	extl3 (ENSDCDG00000022381)	ints9 (ENSDCDG00000022399)	HMBOX1 (ENSDCDG00000022414)
Denticle herring	MODERN SPECIES		orc3 (ENSDCDG00000014634)	znf292a (ENSDCDG00000014623)	cga (ENSDCDG00000014603)	syncripl (ENSDCDG00000014510)	SNX14 (ENSDCDG00000013624)	ENSDCDG00000013561	myo6b (ENSDCDG00000013243)	ENSDCDG00000013230	bdkrb1 (ENSDCDG00000013229)	colec11 (ENSDCDG00000013226)	ENSDCDG00000013219	sox11a (ENSDCDG00000015657)	CMPK2 (ENSDCDG00000015655) #19	rsad2 (ENSDCDG00000015651) #20	rnf144aa (ENSDCDG00000015646) #21	id2a (ENSDCDG00000015640) #22	KIDINS220 (ENSDCDG00000015612) #23	MBOAT2 (ENSDCDG00000015048) #24	asap2a (ENSDCDG00000013621) #25	itgb1bp1 (ENSDCDG00000013600) #26	iah1 (ENSDCDG00000013594) #28	adam17a (ENSDCDG00000005437) #29	ywhaqb (ENSDCDG00000005379) ##30	grhl1 (ENSDCDG00000005109) #32	klf11b (ENSDCDG00000005057) #33	ENSDCDG00000005055	tonsl (ENSDCDG00000005045)	sav1 (ENSDCDG00000005035)	atl1 (ENSDCDG00000003877)	map4k5 (ENSDCDG00000002874)	cdkl1 (ENSDCDG00000002842)
Otophysi	ANCESTRAL SPECIES	54	ENSGT00520000055578.a.b	ENSGT00940000153897.b.a.b	ENSGT00940000155459.x.b	ENSGT01030000234527.A.a.a.b.a	ENSGT00490000043329.a.b.g.a	ENSGT00940000155724.q	ENSGT00940000156078.c	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00940000155734	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b
Characiphysae	ANCESTRAL SPECIES	113									ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000157701.a #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b
Characiphysae_b	ANCESTRAL SPECIES	13	ENSGT00940000166976	ENSGT00530000063558.B	ENSGT00390000011877	ENSGT00390000013931	ENSGT01030000234626.B	ENSGT00940000162166	ENSGT00940000160412.a	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.b	ENSGT00940000157701.b #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b
Characoidei	ANCESTRAL SPECIES	118								ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.b	ENSGT00940000157701.b #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b #33	ENSGT00390000013305.a.a #35	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	11	sod2 (ENSPNAG00000021603)	wtap (ENSPNAG00000006471)	acat2 (ENSPNAG00000021694)	KIF25 (ENSPNAG00000021740)	hebp2 (ENSPNAG00000021771)	NHSL1 (ENSPNAG00000021901)	acbd3 (ENSPNAG00000021929)	ccr6a (ENSPNAG00000021944)	cep43 (ENSPNAG00000003705)	myt1la (ENSPNAG00000022305)	rnaseh1 (ENSPNAG00000022344)	rps7 (ENSPNAG00000022404)	allc (ENSPNAG00000022422)	sox11b (ENSPNAG00000022444)	rnf144ab (ENSPNAG00000022457) #21	id2b (ENSPNAG00000022467) #22	kidins220b (ENSPNAG00000022762) #23	mboat2b (ENSPNAG00000022858) #24	e2f6 (ENSPNAG00000022887)	ASAP2 (ENSPNAG00000022972) #25	cpsf3 (ENSPNAG00000023060) #27	ADAM17 (ENSPNAG00000023254) #29	ywhaqa (ENSPNAG00000023304) ##30	taf1b (ENSPNAG00000023321) #31	klf11a (ENSPNAG00000023362) #33	rrm2 (ENSPNAG00000023397) #35	actc1a (ENSPNAG00000023407)	ENSPNAG00000023421	SCG5 (ENSPNAG00000023468)	GREM1 (ENSPNAG00000023485)	ENSPNAG00000023517
Red-bellied piranha	MODERN SPECIES	33	ENSPNAG00000003532	eml1 (ENSPNAG00000005143)	evla (ENSPNAG00000018304)	degs2 (ENSPNAG00000018251)	yy1a (ENSPNAG00000018230)	tpp1 (ENSPNAG00000018187)	ENSPNAG00000018113	GDF7 (ENSPNAG00000018091)	ldah (ENSPNAG00000018060)	APOB (ENSPNAG00000018050)	ENSPNAG00000018030	alkal2b (ENSPNAG00000018025)	SH3YL1 (ENSPNAG00000018012)	ENSPNAG00000017958	NHSL1 (ENSPNAG00000017948)	id2a (ENSPNAG00000017920) #22	KIDINS220 (ENSPNAG00000017901) #23	MBOAT2 (ENSPNAG00000017820) #24	asap2a (ENSPNAG00000017729) #25	itgb1bp1 (ENSPNAG00000017444) #26	iah1 (ENSPNAG00000017402) #28	adam17a (ENSPNAG00000017353) #29	rnf144aa (ENSPNAG00000017242) #21	rsad2 (ENSPNAG00000017210) #20	CMPK2 (ENSPNAG00000017162) #19	ENSPNAG00000003468	ENSPNAG00000017132	ENSPNAG00000017107	colec11 (ENSPNAG00000017024)	htr1b (ENSPNAG00000017017)	ENSPNAG00000016997
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	18	ENSAMXG00000002134	hebp2 (ENSAMXG00000034618)	NHSL1 (ENSAMXG00000002111)	acbd3 (ENSAMXG00000002091)	ENSAMXG00000043932	ccr6a (ENSAMXG00000041469)	cep43 (ENSAMXG00000002000)	myt1la (ENSAMXG00000001873)	ENSAMXG00000039837	rnaseh1 (ENSAMXG00000042940)	rps7 (ENSAMXG00000041019)	allc (ENSAMXG00000039561)	sox11b (ENSAMXG00000001703)	rnf144ab (ENSAMXG00000042340) #21	ENSAMXG00000041355	id2b (ENSAMXG00000004758) #22	kidins220b (ENSAMXG00000004760) #23	mboat2b (ENSAMXG00000004764) #24	e2f6 (ENSAMXG00000004766)	ENSAMXG00000004772 #25	cpsf3 (ENSAMXG00000004786) #27	ENSAMXG00000043808	ADAM17 (ENSAMXG00000004790) #29	ywhaqa (ENSAMXG00000034065) ##30	taf1b (ENSAMXG00000004793) #31	klf11a (ENSAMXG00000036736) #33	rrm2 (ENSAMXG00000002688) #35	ENSAMXG00000029756	actc1a (ENSAMXG00000004797)	ENSAMXG00000036014	SCG5 (ENSAMXG00000004801)
Mexicana tetra	MODERN SPECIES	24	ccdc28a (ENSAMXG00000030205)	ENSAMXG00000011766	zgc:162964 (ENSAMXG00000011772)	XDH (ENSAMXG00000011782)	ENSAMXG00000011826	dnajc27 (ENSAMXG00000041488)	EFR3B (ENSAMXG00000011856)	pomca (ENSAMXG00000011859)	ENSAMXG00000011865	snx9a (ENSAMXG00000011891)	alkal2b (ENSAMXG00000034620)	SH3YL1 (ENSAMXG00000040950)	ENSAMXG00000008305	ENSAMXG00000033695	NHSL1 (ENSAMXG00000035826)	id2a (ENSAMXG00000017387) #22	KIDINS220 (ENSAMXG00000017375) #23	MBOAT2 (ENSAMXG00000017362) #24	asap2a (ENSAMXG00000017346) #25	ENSAMXG00000034522	itgb1bp1 (ENSAMXG00000029627) #26	iah1 (ENSAMXG00000035768) #28	adam17a (ENSAMXG00000017304) #29	rnf144aa (ENSAMXG00000017286) #21	rsad2 (ENSAMXG00000017272) #20	CMPK2 (ENSAMXG00000030357) #19	ENSAMXG00000033324	eprs1 (ENSAMXG00000001984)	ENSAMXG00000043861	ENSAMXG00000040225	AMY1A (ENSAMXG00000031737)
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	32	sod2 (ENSEEEG00000009496)	wtap (ENSEEEG00000009684)	acat2 (ENSEEEG00000009685)	ENSEEEG00000009686	hebp2 (ENSEEEG00000009687)	NHSL1 (ENSEEEG00000009690)	acbd3 (ENSEEEG00000009692)	KBTBD11 (ENSEEEG00000009724)	ccr6a (ENSEEEG00000009725)	cep43 (ENSEEEG00000009727)	rnaseh1 (ENSEEEG00000009735)	rps7 (ENSEEEG00000009739)	allc (ENSEEEG00000009756)	sox11b (ENSEEEG00000009766)	rnf144ab (ENSEEEG00000009767) #21	id2b (ENSEEEG00000009787) #22	kidins220b (ENSEEEG00000009802) #23	mboat2b (ENSEEEG00000009813) #24	e2f6 (ENSEEEG00000009819)	ENSEEEG00000009834 #25	cpsf3 (ENSEEEG00000010171) #27	ADAM17 (ENSEEEG00000010193) #29	ywhaqa (ENSEEEG00000010207) ##30	taf1b (ENSEEEG00000010218) #31	klf11a (ENSEEEG00000010223) #33	rrm2 (ENSEEEG00000010228) #35	actc1a (ENSEEEG00000010295)	SCG5 (ENSEEEG00000010408)	GREM1 (ENSEEEG00000010409)	ENSEEEG00000010410	RYR3 (ENSEEEG00000010414)
Electric eel	MODERN SPECIES	192														ENSEEEG00000016759	NHSL1 (ENSEEEG00000016760)	id2a (ENSEEEG00000016762) #22	KIDINS220 (ENSEEEG00000016777) #23	MBOAT2 (ENSEEEG00000016939) #24	asap2a (ENSEEEG00000016940) #25	itgb1bp1 (ENSEEEG00000016941) #26	iah1 (ENSEEEG00000016945) #28	adam17a (ENSEEEG00000016971) #29	rnf144aa (ENSEEEG00000017566) #21	rsad2 (ENSEEEG00000017569) #20	CMPK2 (ENSEEEG00000017571) #19	sox11a (ENSEEEG00000017575)	ENSEEEG00000017578
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	17	SOD2 (ENSIPUG00000022934)	wtap (ENSIPUG00000022938)	acat2 (ENSIPUG00000022947)	kif25 (ENSIPUG00000022979)	hebp2 (ENSIPUG00000022989)	nhsl1 (ENSIPUG00000022998)	acbd3 (ENSIPUG00000023014)	ccr6a (ENSIPUG00000023019)	fgfr1op (ENSIPUG00000023022)	myt1la (ENSIPUG00000023048)	rnaseh1 (ENSIPUG00000023060)	rps7 (ENSIPUG00000023071)	allc (ENSIPUG00000023088)	sox11b (ENSIPUG00000023096)	ENSIPUG00000023404 #21	id2b (ENSIPUG00000023411) #22	kidins220b (ENSIPUG00000023417) #23	mboat2b (ENSIPUG00000023454) #24	e2f6 (ENSIPUG00000023463)	ASAP2 (ENSIPUG00000023474) #25	cpsf3 (ENSIPUG00000023488) #27	ADAM17 (ENSIPUG00000023507) #29	ywhaq (ENSIPUG00000023526) ##30	taf1b (ENSIPUG00000023529) #31	klf11 (ENSIPUG00000023533) #33	rrm2 (ENSIPUG00000023535) #35	actc1a (ENSIPUG00000023541)	SCG5 (ENSIPUG00000023546)	grem1 (ENSIPUG00000023550)	fmn1 (ENSIPUG00000023553)	ryr3 (ENSIPUG00000023575)
Channel catfish	MODERN SPECIES	28	ENSIPUG00000021017	eml1 (ENSIPUG00000021029)	evla (ENSIPUG00000021087)	degs2 (ENSIPUG00000021101)	yy1a (ENSIPUG00000021118)	tpp1 (ENSIPUG00000021135)	GDF7 (ENSIPUG00000021164)	ldah (ENSIPUG00000021168)	APOB (ENSIPUG00000021194)	c9h1orf115 (ENSIPUG00000021307)	alkal2b (ENSIPUG00000021314)	Sh3yl1 (ENSIPUG00000021334)	NHSL1 (ENSIPUG00000021350)	ENSIPUG00000021359	ENSIPUG00000021367	ID2 (ENSIPUG00000021368) #22	KIDINS220 (ENSIPUG00000021377) #23	mboat2 (ENSIPUG00000021660) #24	asap2 (ENSIPUG00000023403) #25	ITGB1BP1 (ENSIPUG00000023464) #26	iah1 (ENSIPUG00000023477) #28	adam17a (ENSIPUG00000023481) #29	rnf144aa (ENSIPUG00000023528) #21	rsad2 (ENSIPUG00000023544) #20	cmpk2 (ENSIPUG00000023548) #19	sox11 (ENSIPUG00000023551)	colec11 (ENSIPUG00000023552)	HTR1B (ENSIPUG00000023556)	myo6b (ENSIPUG00000023558)	ENSIPUG00000023566	mapre3a (ENSIPUG00000023574)
Cyprinoidei	ANCESTRAL SPECIES	72	ENSGT01030000234667.b.f.a	ENSGT00530000063651.a	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00950000182843.a.a.a.a.tb	ENSGT00950000182843.a.a.a.a.ub	ENSGT00940000158622	ENSGT00410000026259	ENSGT00390000003866.a.b.a	ENSGT00940000168283	ENSGT00390000016904	ENSGT00530000063737.l.b	ENSGT00390000016577.b.a	ENSGT00940000156087.a.a	ENSGT00390000007015.w	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990.q #26	ENSGT00390000008069 #28	ENSGT00940000155443.c #29
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	928											ENSGT00390000003466.n	ENSGT00390000014122.h	ENSGT00390000001793.c	ENSGT00940000161652.b.b.b.b.b	ENSGT00940000157701.f.a.a #21	ENSGT00940000156464.db #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000156464.db #22
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	28	FNDC1 (ENSCCRG00000061407)	sod2 (ENSCCRG00000053850)	wtap (ENSCCRG00000036927)	acat2 (ENSCCRG00000076853)	ENSCCRG00000064494	ENSCCRG00000054161	acbd3 (ENSCCRG00000036992)	ccr6a (ENSCCRG00000053257)	cep43 (ENSCCRG00000074485)	myt1la (ENSCCRG00000064746)	rnaseh1 (ENSCCRG00000014420)	rps7 (ENSCCRG00000014352)	allc (ENSCCRG00000012846)	sox11b (ENSCCRG00000064255)	rnf144ab (ENSCCRG00000036211) #21	id2b (ENSCCRG00000058010) #22	kidins220b (ENSCCRG00000050017) #23	mboat2b (ENSCCRG00000049813) #24	e2f6 (ENSCCRG00000049786)	ENSCCRG00000049779	asap2b (ENSCCRG00000046382)	cpsf3 (ENSCCRG00000050211) #27	ADAM17 (ENSCCRG00000050317) #29	ywhaqa (ENSCCRG00000002833) ##30	klf11a (ENSCCRG00000050719) #33	ENSCCRG00000058391 #35	ENSCCRG00000031062	SCG5 (ENSCCRG00000033404)	GREM1 (ENSCCRG00000057753)	FMN1 (ENSCCRG00000078430)	RYR3 (ENSCCRG00000031160)
Common carp reference	MODERN SPECIES	34	sod2 (ENSCCRG00000079233)	wtap (ENSCCRG00000061771)	acat2 (ENSCCRG00000072282)	ENSCCRG00000036974	ENSCCRG00000079447	acbd3 (ENSCCRG00000030468)	ccr6a (ENSCCRG00000079596)	cep43 (ENSCCRG00000004734)	myt1la (ENSCCRG00000004110)	rnaseh1 (ENSCCRG00000012828)	ENSCCRG00000061716	rps7 (ENSCCRG00000012830)	ENSCCRG00000070367	sox11b (ENSCCRG00000054079)	rnf144ab (ENSCCRG00000075326) #21	id2b (ENSCCRG00000061529) #22	kidins220b (ENSCCRG00000050138) #23	mboat2b (ENSCCRG00000049975) #24	e2f6 (ENSCCRG00000049247)	asap2b (ENSCCRG00000049372)	cpsf3 (ENSCCRG00000062315) #27	ADAM17 (ENSCCRG00000050647) #29	taf1b (ENSCCRG00000031078) #31	klf11a (ENSCCRG00000031075) #33	RRM2 (ENSCCRG00000067501) #35	ENSCCRG00000005442	GREM1 (ENSCCRG00000051130)	FMN1 (ENSCCRG00000067336)	RYR3 (ENSCCRG00000033603)	aven (ENSCCRG00000062528)	chrm5b (ENSCCRG00000033453)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	420	ENSGT00390000011877.a	ENSGT00390000013931.f	ENSGT01030000234626.B.pb	ENSGT00940000162166.g.b	ENSGT00940000160412.a.b	ENSGT00950000182963.a.a.k.a	ENSGT00530000063651.a.o.a	ENSGT01030000234667.b.f.a.d	ENSGT00390000007441.e	ENSGT00940000155671.y.b.b	ENSGT00390000003466.m	ENSGT00390000014122.g	ENSGT00390000001793.d	ENSGT00940000161652.b.b.b.b.a	ENSGT00940000157701.f.a.b #21	ENSGT00940000156464.eb.a.a #22	ENSGT00940000156714.b.a #23	ENSGT01030000234564.a.a.a.a.b.b.e #24	ENSGT00940000155734.hb
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1175															rnf144ab (ENSCARG00000057949) #21	id2b (ENSCARG00000057968) #22
Goldfish	MODERN SPECIES	39	scyl3 (ENSCARG00000025783)	prg4b (ENSCARG00000025761)	allc (ENSCARG00000025610)	rps7 (ENSCARG00000025561)	rnaseh1 (ENSCARG00000025518)	myt1la (ENSCARG00000023430)	cep43 (ENSCARG00000023220)	ccr6a (ENSCARG00000023204)	acbd3 (ENSCARG00000023157)	NHSL1 (ENSCARG00000023097)	hebp2 (ENSCARG00000023065)	acat2 (ENSCARG00000023014)	wtap (ENSCARG00000023002)	sod2 (ENSCARG00000022970)	FNDC1 (ENSCARG00000022921)	id2b (ENSCARG00000022907) #22	kidins220b (ENSCARG00000022840) #23	mboat2b (ENSCARG00000022572) #24	e2f6 (ENSCARG00000048277)	asap2b (ENSCARG00000047812)	cpsf3 (ENSCARG00000047449) #27	ENSCARG00000047379 #29	cited2 (ENSCARG00000047369)	map3k7 (ENSCARG00000044760)	BACH2 (ENSCARG00000044654)	GJA10 (ENSCARG00000044641)	casp8ap2 (ENSCARG00000044635)	katna1 (ENSCARG00000044615)	ginm1 (ENSCARG00000044603)	ENSCARG00000044583	sh3rf1 (ENSCARG00000044539)
Cyprininae_a	ANCESTRAL SPECIES	86	ENSGT00390000011877.a	ENSGT00390000013931.f	ENSGT01030000234626.B.pb	ENSGT00940000162166.g.b	ENSGT00940000160412.a.b	ENSGT00950000182963.a.a.k.a	ENSGT00530000063651.a.o.a	ENSGT01030000234667.b.f.a.d	ENSGT00390000007441.e	ENSGT00940000155671.y.b.b	ENSGT00390000003466.m	ENSGT00390000014122.g	ENSGT00390000001793.d	ENSGT00940000161652.b.b.b.b.a	ENSGT00940000157701.f.a.b #21	ENSGT00940000156464.eb.a.a #22	ENSGT00940000156714.b.a #23	ENSGT01030000234564.a.a.a.a.b.b.e #24	ENSGT00940000155734.gb.a	ENSGT00940000155734.hb	ENSGT00940000167539.b	ENSGT00940000155699.a.a.d #27	ENSGT00940000155443.d.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00940000155982.e.b.b #33	ENSGT00390000013305.a.a.m #35	ENSGT00940000156048.e.a.b.b.a.b	ENSGT00390000009816.c.a	ENSGT00940000154209.a.a.h.d.a	ENSGT00940000154289.A.a.b.h	ENSGT00940000155507.a.b.a
Golden-line barbel	MODERN SPECIES	14	ENSSGRG00000040440	ENSSGRG00000040448	ENSSGRG00000040450	sod2 (ENSSGRG00000040469)	wtap (ENSSGRG00000040595)	acat2 (ENSSGRG00000040620)	hebp2 (ENSSGRG00000040677)	NHSL1 (ENSSGRG00000040679)	acbd3 (ENSSGRG00000040680)	cep43 (ENSSGRG00000040684)	myt1la (ENSSGRG00000040685)	rnaseh1 (ENSSGRG00000040687)	allc (ENSSGRG00000040688)	sox11b (ENSSGRG00000040812)	rnf144ab (ENSSGRG00000040813) #21	id2b (ENSSGRG00000040814) #22	kidins220b (ENSSGRG00000040828) #23	mboat2b (ENSSGRG00000041592) #24	ENSSGRG00000041611	asap2b (ENSSGRG00000041638)	ENSSGRG00000042339	cpsf3 (ENSSGRG00000042343) #27	ADAM17 (ENSSGRG00000042815) #29	ywhaqa (ENSSGRG00000043677) ##30	ENSSGRG00000043678	ENSSGRG00000043681	SCG5 (ENSSGRG00000044040)	GREM1 (ENSSGRG00000044042)	RYR3 (ENSSGRG00000044248)	aven (ENSSGRG00000049247)	chrm5b (ENSSGRG00000049248)
Cyprininae	ANCESTRAL SPECIES	154																ENSGT00940000156464.eb.a.b #22	ENSGT00940000156714.b.b #23	ENSGT01030000234564.a.a.a.a.b.b.f #24	ENSGT00940000155734.gb.b	ENSGT00940000167539.a	ENSGT00940000155699.a.a.c #27	ENSGT00940000155443.d.c #29	ENSGT00940000155734.gb.a	ENSGT00940000167539.b	ENSGT00940000155699.a.a.d #27	ENSGT00940000155443.d.d #29	ENSGT01090000260040.b.b.b.a.m.b ##30	ENSGT00440000033827 #31	ENSGT00940000155982.e.b.a #33	ENSGT00390000013305.a.a.n #35	ENSGT00940000156048.e.a.b.b.a.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	12	paqr8 (ENSCARG00000005646)	znf395b (ENSCARG00000005649)	pnocb (ENSCARG00000005656)	si:ch211-63o20.7 (ENSCARG00000005660)	elp3 (ENSCARG00000005669)	slc25a24 (ENSCARG00000005688)	ENSCARG00000005722	ENSCARG00000005760	prrx1b (ENSCARG00000005769)	gorab (ENSCARG00000005799)	ntmt2 (ENSCARG00000005808)	allc (ENSCARG00000005816)	rps7 (ENSCARG00000005846)	rnaseh1 (ENSCARG00000005871)	lratd1 (ENSCARG00000005899)	id2b (ENSCARG00000005906) #22	kidins220b (ENSCARG00000005927) #23	mboat2b (ENSCARG00000006068) #24	e2f6 (ENSCARG00000007357)	asap2b (ENSCARG00000007402)	cpsf3 (ENSCARG00000007650) #27	ADAM17 (ENSCARG00000007700) #29	ywhaqa (ENSCARG00000007885) ##30	taf1b (ENSCARG00000007909) #31	klf11a (ENSCARG00000007922) #33	RRM2 (ENSCARG00000007961) #35	ACTA1 (ENSCARG00000009564)	SCG5 (ENSCARG00000009571)	GREM1 (ENSCARG00000009576)	ENSCARG00000009577	ENSCARG00000011008
Goldfish	MODERN SPECIES	1887																id2b (ENSCARG00000038642) #22
Cyprininae_a	ANCESTRAL SPECIES	127	ENSGT00390000011877.b	ENSGT00390000013931.e	ENSGT01030000234626.B.qb	ENSGT00940000162166.g.a	ENSGT00940000162166.h	ENSGT00940000160412.a.a	ENSGT00950000182963.a.a.k.b	ENSGT00530000063651.a.o.b	ENSGT01030000234667.b.f.a.c	ENSGT00390000007441.f	ENSGT00940000155671.y.b.a	ENSGT00390000003466.n	ENSGT00390000001793.c	ENSGT00940000161652.b.b.b.b.b	ENSGT00940000157701.f.a.a #21	ENSGT00940000156464.eb.a.b #22	ENSGT00940000156714.b.b #23	ENSGT01030000234564.a.a.a.a.b.b.f #24	ENSGT00940000155734.gb.b	ENSGT00940000167539.a	ENSGT00940000155699.a.a.c #27	ENSGT00940000155443.d.c #29	ENSGT00440000033827 #31	ENSGT00940000155982.e.b.a #33	ENSGT00390000013305.a.a.n #35	ENSGT00940000156048.e.a.b.b.a.a	ENSGT00390000009816.c.b	ENSGT00940000154209.a.a.h.d.b	ENSGT00940000154289.A.a.b.g	ENSGT00940000155507.a.b.b	ENSGT00390000003299.b
Golden-line barbel	MODERN SPECIES	361	sod2 (ENSSGRG00000029276)	wtap (ENSSGRG00000029204)	acat2 (ENSSGRG00000029036)	KIF25 (ENSSGRG00000029034)	hebp2 (ENSSGRG00000029033)	NHSL1 (ENSSGRG00000029030)	acbd3 (ENSSGRG00000029022)	ccr6a (ENSSGRG00000029020)	cep43 (ENSSGRG00000029019)	myt1la (ENSSGRG00000028996)	rnaseh1 (ENSSGRG00000028989)	rps7 (ENSSGRG00000028981)	allc (ENSSGRG00000028980)	sox11b (ENSSGRG00000028979)	rnf144ab (ENSSGRG00000028975) #21	id2b (ENSSGRG00000028973) #22	kidins220b (ENSSGRG00000028621) #23	mboat2b (ENSSGRG00000028611) #24	e2f6 (ENSSGRG00000028609)	ENSSGRG00000028608	ENSSGRG00000028605	cpsf3 (ENSSGRG00000028258) #27	ADAM17 (ENSSGRG00000028037) #29	klf11a (ENSSGRG00000027887) #33	ENSSGRG00000027881	SCG5 (ENSSGRG00000027876)	GREM1 (ENSSGRG00000027874)	FMN1 (ENSSGRG00000027873)	aven (ENSSGRG00000027796)	chrm5b (ENSSGRG00000027789)	emc7b (ENSSGRG00000027788)
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	739																ENSGT00940000156464.eb.b.a #22	ENSGT00940000156714.a.a #23	ENSGT01030000234564.a.a.a.a.b.a.p #24	ENSGT00940000163467.b.a.b.d.a.a	ENSGT00940000155623.k #25	ENSGT00390000003990.q.a #26	ENSGT00390000008069.a #28	ENSGT00940000155443.c.b #29	ENSGT00940000157701.f.b.b #21	ENSGT00390000013670.j #20	ENSGT00940000154030.a.b.a #19
Goldfish	MODERN SPECIES	36	BAHD1 (ENSCARG00000021890)	ENSCARG00000021885	ccdc32 (ENSCARG00000021872)	pcmtl (ENSCARG00000021826)	rpusd2 (ENSCARG00000021816)	disp2 (ENSCARG00000021793)	ENSCARG00000021782	eml1 (ENSCARG00000021325)	evla (ENSCARG00000021276)	degs2 (ENSCARG00000021263)	yy1a (ENSCARG00000021249)	tpp1 (ENSCARG00000021177)	ENSCARG00000021158	ENSCARG00000054540	ENSCARG00000054525	id2a (ENSCARG00000054514) #22	KIDINS220 (ENSCARG00000054188) #23	MBOAT2 (ENSCARG00000053242) #24	ENSCARG00000053212	asap2a (ENSCARG00000052690) #25	iah1 (ENSCARG00000052601) #28	adam17a (ENSCARG00000051817) #29	rnf144aa (ENSCARG00000051709) #21	rsad2 (ENSCARG00000051680) #20	CMPK2 (ENSCARG00000051670) #19	ENSCARG00000051663	ENSCARG00000051505	ENSCARG00000051432	ENSCARG00000051417	dnmt3ab (ENSCARG00000051027)	SLC35F4 (ENSCARG00000050975)
Cyprininae_a	ANCESTRAL SPECIES	74															ENSGT00390000007015.w.a	ENSGT00940000156464.eb.b.a #22	ENSGT00940000156714.a.a #23	ENSGT01030000234564.a.a.a.a.b.a.p #24	ENSGT00940000163467.b.a.b.d.a.a.b	ENSGT00940000155623.k #25	ENSGT00390000003990.r #26	ENSGT00940000155443.c.b #29	ENSGT00940000157701.f.b.b #21	ENSGT00940000154030.a.b.a #19	ENSGT00390000013670.j #20	ENSGT00940000154030.a.b.b #19	ENSGT00940000159468.d	ENSGT01010000222287.B.b.a.b.b.b.c	ENSGT00530000063503.a.b.g.b.b	ENSGT00490000043329.a.b.g.a.b	ENSGT01030000234527.A.a.a.b.a.b
Common carp reference	MODERN SPECIES	4	ENSCCRG00000045851	zgc:162964 (ENSCCRG00000046158)	ccdc28a (ENSCCRG00000046167)	snap23.1 (ENSCCRG00000047726)	snap23.2 (ENSCCRG00000066564)	ENSCCRG00000034624	pth2 (ENSCCRG00000034617)	ENSCCRG00000078141	ENSCCRG00000057185	ENSCCRG00000070861	fut8a (ENSCCRG00000034477)	gphna (ENSCCRG00000080356)	pals1a (ENSCCRG00000015300)	eif2s1a (ENSCCRG00000019525)	ENSCCRG00000079476	id2a (ENSCCRG00000036843) #22	KIDINS220 (ENSCCRG00000036900) #23	MBOAT2 (ENSCCRG00000004529) #24	asap2a (ENSCCRG00000014017) #25	ENSCCRG00000070377	ENSCCRG00000067366	itgb1bp1 (ENSCCRG00000013986) #26	iah1 (ENSCCRG00000013979) #28	adam17a (ENSCCRG00000002200) #29	rnf144aa (ENSCCRG00000012999) #21	rsad2 (ENSCCRG00000001864) #20	CMPK2 (ENSCCRG00000055315) #19	ENSCCRG00000068064	sox11a (ENSCCRG00000060391)	colec11 (ENSCCRG00000041025)	HTR1B (ENSCCRG00000049481)
Golden-line barbel	MODERN SPECIES	467												fut8a (ENSSGRG00000016620)	gphna (ENSSGRG00000016434)	pals1a (ENSSGRG00000015932)	eif2s1a (ENSSGRG00000015915)	id2a (ENSSGRG00000015913) #22	KIDINS220 (ENSSGRG00000015912) #23	MBOAT2 (ENSSGRG00000015686) #24	asap2a (ENSSGRG00000015190) #25	ITGB1BP1 (ENSSGRG00000015185) #26	adam17a (ENSSGRG00000014892) #29	rsad2 (ENSSGRG00000014890) #20	ENSSGRG00000014888 #19
Cyprininae	ANCESTRAL SPECIES	200	ENSGT00530000063651.a.p.b	ENSGT00940000158839	ENSGT00500000044870.a.i	ENSGT00950000182843.a.a.a.a.tb.b	ENSGT00950000182843.a.a.a.a.ub.a.a	ENSGT00940000158622.e	ENSGT00410000026259.c	ENSGT00390000003866.a.b.a.a	ENSGT00940000168283.a	ENSGT00390000016904.g.b	ENSGT00530000063737.l.b.b	ENSGT00530000063737.k	ENSGT00390000016577.b.a.d	ENSGT00940000156087.a.a.a	ENSGT00390000007015.w.a	ENSGT00940000156464.eb.b.b #22	ENSGT00940000156714.a.b #23	ENSGT01030000234564.a.a.a.a.b.a.o #24	ENSGT00940000155623.l #25	ENSGT00390000003990.q.b #26	ENSGT00390000008069.b #28	ENSGT00940000155443.c.a #29	ENSGT00940000157701.f.b.a #21	ENSGT00390000013670.i #20	ENSGT00940000161652.b.b.b.a.a	ENSGT00940000164359.b	ENSGT00940000159468.c	ENSGT01010000222287.B.b.a.b.b.b.d	ENSGT00530000063503.a.b.g.b.a	ENSGT00940000156078.c.a.a	ENSGT00940000155724.q
Goldfish	MODERN SPECIES	8	ECT2L (ENSCARG00000031614)	ccdc28a (ENSCARG00000031622)	snap23.1 (ENSCARG00000031628)	snap23.2 (ENSCARG00000031642)	RIN3 (ENSCARG00000031648)	pth2 (ENSCARG00000031669)	TMEM121 (ENSCARG00000031678)	ENSCARG00000031684	DNAL1 (ENSCARG00000031691)	fut8a (ENSCARG00000031718)	gphna (ENSCARG00000031847)	ENSCARG00000035871	ENSCARG00000035882	pals1a (ENSCARG00000035911)	eif2s1a (ENSCARG00000036385)	id2a (ENSCARG00000036404) #22	KIDINS220 (ENSCARG00000036445) #23	MBOAT2 (ENSCARG00000036930) #24	asap2a (ENSCARG00000037172) #25	rsad2 (ENSCARG00000037380) #20	itgb1bp1 (ENSCARG00000037420) #26	iah1 (ENSCARG00000037431) #28	adam17a (ENSCARG00000037592) #29	rnf144aa (ENSCARG00000050309) #21	ENSCARG00000050341 #19	ENSCARG00000050358	colec11 (ENSCARG00000050371)	HTR1B (ENSCARG00000050392)	ENSCARG00000050407	myo6b (ENSCARG00000050475)	ENSCARG00000050835
Cyprininae_a	ANCESTRAL SPECIES	186	ENSGT00940000166718.b	ENSGT00950000183114.a.a.h	ENSGT00530000063651.a.p.b	ENSGT00940000158839	ENSGT00500000044870.a.i	ENSGT00950000182843.a.a.a.a.tb.b	ENSGT00950000182843.a.a.a.a.ub.a.a	ENSGT00940000158622.e	ENSGT00410000026259.c	ENSGT00390000003866.a.b.a.a	ENSGT00940000168283.a	ENSGT00390000016904.g.b	ENSGT00530000063737.l.b.b	ENSGT00390000016577.b.a.d	ENSGT00940000156087.a.a.a	ENSGT00940000156464.eb.b.b #22	ENSGT00940000156714.a.b #23	ENSGT01030000234564.a.a.a.a.b.a.o #24	ENSGT00940000163467.b.a.b.d.a.a.a	ENSGT00940000155623.l #25	ENSGT00390000003990.q.b #26	ENSGT00390000003990.q.a #26	ENSGT00390000008069.a #28	ENSGT00940000155443.c.a #29	ENSGT00940000157701.f.b.a #21	ENSGT00390000013670.i #20	ENSGT00940000161652.b.b.b.a.a	ENSGT00940000164359.b	ENSGT00940000159468.c	ENSGT01010000222287.B.b.a.b.b.b.d	ENSGT00530000063503.a.b.g.b.a
Common carp reference	MODERN SPECIES	30	zgc:162964 (ENSCCRG00000047711)	ENSCCRG00000047720	ccdc28a (ENSCCRG00000047722)	snap23.1 (ENSCCRG00000066190)	snap23.2 (ENSCCRG00000047736)	snap23.2 (ENSCCRG00000036552)	ENSCCRG00000036557	pth2 (ENSCCRG00000064392)	ENSCCRG00000061596	ENSCCRG00000017363	ENSCCRG00000064294	fut8a (ENSCCRG00000017152)	gphna (ENSCCRG00000056188)	pals1a (ENSCCRG00000069533)	ENSCCRG00000057336	id2a (ENSCCRG00000053241) #22	KIDINS220 (ENSCCRG00000080139) #23	MBOAT2 (ENSCCRG00000049208) #24	ENSCCRG00000077155	asap2a (ENSCCRG00000009059) #25	itgb1bp1 (ENSCCRG00000009017) #26	ENSCCRG00000009012	adam17a (ENSCCRG00000060377) #29	rnf144aa (ENSCCRG00000069223) #21	rsad2 (ENSCCRG00000002099) #20	ENSCCRG00000058522	ENSCCRG00000077898	sox11a (ENSCCRG00000064618)	ENSCCRG00000057630	ENSCCRG00000053134	colec11 (ENSCCRG00000082687)
Golden-line barbel	MODERN SPECIES	4163																id2a (ENSSGRG00000006388) #22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	12	sod2 (ENSDARG00000042644)	wtap (ENSDARG00000042642)	acat2 (ENSDARG00000007127)	KIF25 (ENSDARG00000017532)	hebp2 (ENSDARG00000042630)	NHSL1 (ENSDARG00000042627)	acbd3 (ENSDARG00000042623)	ccr6a (ENSDARG00000087474)	cep43 (ENSDARG00000003058)	myt1la (ENSDARG00000008209)	rnaseh1 (ENSDARG00000042571)	rps7 (ENSDARG00000042566)	allc (ENSDARG00000042562)	sox11b (ENSDARG00000095743)	rnf144ab (ENSDARG00000042557) #21	id2b (ENSDARG00000029544) #22	kidins220b (ENSDARG00000017338) #23	mboat2b (ENSDARG00000042551) #24	e2f6 (ENSDARG00000008119)	asap2b (ENSDARG00000019564)	cpsf3 (ENSDARG00000027649) #27	ADAM17 (ENSDARG00000093093) #29	ywhaqa (ENSDARG00000042539) ##30	ENSDARG00000112254	taf1b (ENSDARG00000028937) #31	klf11a (ENSDARG00000030844) #33	rrm2 (ENSDARG00000020711) #35	actc1a (ENSDARG00000042535)	SCG5 (ENSDARG00000032126)	grem1a (ENSDARG00000029546)	FMN1 (ENSDARG00000011975)
Zebrafish	MODERN SPECIES	8	zgc:162964 (ENSDARG00000024602)	ECT2L (ENSDARG00000091471)	ccdc28a (ENSDARG00000022983)	snap23.1 (ENSDARG00000012874)	snap23.2 (ENSDARG00000055252)	ENSDARG00000077618	pth2 (ENSDARG00000022951)	TMEM121 (ENSDARG00000061562)	ENSDARG00000091366	dnal1 (ENSDARG00000097505)	dnal1 (ENSDARG00000034042)	fut8a (ENSDARG00000015449)	gphna (ENSDARG00000089076)	pals1a (ENSDARG00000006272)	eif2s1a (ENSDARG00000005827)	id2a (ENSDARG00000055283) #22	KIDINS220 (ENSDARG00000031240) #23	MBOAT2 (ENSDARG00000031845) #24	asap2a (ENSDARG00000010181) #25	itgb1bp1 (ENSDARG00000007169) #26	iah1 (ENSDARG00000015765) #28	adam17a (ENSDARG00000043213) #29	rnf144aa (ENSDARG00000020600) #21	rsad2 (ENSDARG00000004952) #20	CMPK2 (ENSDARG00000031359) #19	ENSDARG00000111789	sox11a (ENSDARG00000077811)	ENSDARG00000103264	colec11 (ENSDARG00000013266)	htr1b (ENSDARG00000053987)	ENSDARG00000074839
Euteleosteomorpha	ANCESTRAL SPECIES	52	ENSGT00390000012242	ENSGT01010000222287.B.b.a.a.b.b	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.m.a.a ##30
Acanthomorphata	ANCESTRAL SPECIES	7	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Cod	MODERN SPECIES	18	znf292a (ENSGMOG00000035404)	cga (ENSGMOG00000010447)	SYNCRIP (ENSGMOG00000010432)	ENSGMOG00000010401	NT5E (ENSGMOG00000010380)	HTR1B (ENSGMOG00000020373)	ENSGMOG00000010359	MYO6 (ENSGMOG00000010314)	colec11 (ENSGMOG00000016181)	ENSGMOG00000023197	sox11a (ENSGMOG00000025561)	CMPK2 (ENSGMOG00000010299) #19	rsad2 (ENSGMOG00000010291) #20	rnf144aa (ENSGMOG00000010275) #21	ENSGMOG00000024861	id2a (ENSGMOG00000010271) #22	KIDINS220 (ENSGMOG00000010191) #23	MBOAT2 (ENSGMOG00000010222) #24	asap2a (ENSGMOG00000011249) #25	itgb1bp1 (ENSGMOG00000011241) #26	CPSF3 (ENSGMOG00000011222) #27	ENSGMOG00000035887	iah1 (ENSGMOG00000011208) #28	adam17a (ENSGMOG00000011183) #29	ywhaqb (ENSGMOG00000011175) ##30	grhl1 (ENSGMOG00000011159) #32	KLF11 (ENSGMOG00000022974) #33	ENSGMOG00000029783	ENSGMOG00000011132	ENSGMOG00000023746	ENSGMOG00000011108
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Tiger tail seahorse	MODERN SPECIES	350												sox11a (ENSHCOG00000016265)	CMPK2 (ENSHCOG00000016245) #19	rsad2 (ENSHCOG00000016219) #20	rnf144aa (ENSHCOG00000016198) #21	id2a (ENSHCOG00000016190) #22	KIDINS220 (ENSHCOG00000016172) #23	MBOAT2 (ENSHCOG00000016042) #24	asap2a (ENSHCOG00000016011) #25	itgb1bp1 (ENSHCOG00000015971) #26	CPSF3 (ENSHCOG00000015957) #27	ENSHCOG00000015932	iah1 (ENSHCOG00000015854) #28	adam17a (ENSHCOG00000015914) #29	grhl1 (ENSHCOG00000015842) #32	ENSHCOG00000015798	dnaaf2 (ENSHCOG00000015790)	lrr1 (ENSHCOG00000015782)	ENSHCOG00000015776	RPAP1 (ENSHCOG00000015771)	ltk (ENSHCOG00000015756)
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Tetraodon	MODERN SPECIES	1	GABRR1 (ENSTNIG00000017294)	PM20D2 (ENSTNIG00000017295)	CNR1 (ENSTNIG00000017296)	akirin2 (ENSTNIG00000017297)	orc3 (ENSTNIG00000002054)	znf292a (ENSTNIG00000017298)	syncripl (ENSTNIG00000017299)	SNX14 (ENSTNIG00000017300)	ENSTNIG00000017301	myo6b (ENSTNIG00000017302)	colec11 (ENSTNIG00000017303)	sox11a (ENSTNIG00000017304)	CMPK2 (ENSTNIG00000017305) #19	rsad2 (ENSTNIG00000017306) #20	rnf144aa (ENSTNIG00000017307) #21	id2a (ENSTNIG00000017308) #22	KIDINS220 (ENSTNIG00000017309) #23	MBOAT2 (ENSTNIG00000017310) #24	asap2a (ENSTNIG00000017311) #25	itgb1bp1 (ENSTNIG00000017312) #26	CPSF3 (ENSTNIG00000017313) #27	DNAJC30 (ENSTNIG00000017314)	iah1 (ENSTNIG00000017315) #28	adam17a (ENSTNIG00000017316) #29	ywhaqb (ENSTNIG00000004120) ##30	grhl1 (ENSTNIG00000017317) #32	klf11b (ENSTNIG00000017318) #33	ENSTNIG00000000030	ENSTNIG00000017319	lrr1 (ENSTNIG00000017320)	ENSTNIG00000017321
Fugu	MODERN SPECIES	11	orc3 (ENSTRUG00000006055)	ENSTRUG00000027132	cga (ENSTRUG00000005818)	syncripl (ENSTRUG00000005365)	SNX14 (ENSTRUG00000005018)	nt5e (ENSTRUG00000004739)	HTR1B (ENSTRUG00000004617)	ENSTRUG00000030356	colec11 (ENSTRUG00000003309)	ENSTRUG00000026998	ENSTRUG00000026501	Sox11 (ENSTRUG00000003243)	CMPK2 (ENSTRUG00000021495) #19	rsad2 (ENSTRUG00000002731) #20	rnf144aa (ENSTRUG00000022426) #21	id2a (ENSTRUG00000014552) #22	KIDINS220 (ENSTRUG00000014349) #23	MBOAT2 (ENSTRUG00000014264) #24	asap2a (ENSTRUG00000014081) #25	itgb1bp1 (ENSTRUG00000024666) #26	ENSTRUG00000013899	iah1 (ENSTRUG00000030034) #28	adam17a (ENSTRUG00000013788) #29	ywhaqa (ENSTRUG00000013765) ##30	grhl1 (ENSTRUG00000013628) #32	ENSTRUG00000013598	dnaaf2 (ENSTRUG00000024016)	lrr1 (ENSTRUG00000013544)	ENSTRUG00000013532	RPAP1 (ENSTRUG00000013352)	ltk (ENSTRUG00000013219)
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Ballan wrasse	MODERN SPECIES	151	akirin2 (ENSLBEG00000015205)	orc3 (ENSLBEG00000015166)	znf292a (ENSLBEG00000015092)	cga (ENSLBEG00000015050)	syncripl (ENSLBEG00000014984)	SNX14 (ENSLBEG00000014597)	HTR1B (ENSLBEG00000014485)	ENSLBEG00000014470	ENSLBEG00000014455	myo6b (ENSLBEG00000014283)	colec11 (ENSLBEG00000014219)	sox11a (ENSLBEG00000014198)	CMPK2 (ENSLBEG00000014178) #19	rsad2 (ENSLBEG00000014151) #20	rnf144aa (ENSLBEG00000014121) #21	id2a (ENSLBEG00000014100) #22	KIDINS220 (ENSLBEG00000013849) #23	MBOAT2 (ENSLBEG00000013695) #24	asap2a (ENSLBEG00000013596) #25	itgb1bp1 (ENSLBEG00000013544) #26	CPSF3 (ENSLBEG00000013492) #27	DNAJC30 (ENSLBEG00000013458)	iah1 (ENSLBEG00000013431) #28	adam17a (ENSLBEG00000013365) #29	ywhaqb (ENSLBEG00000013306) ##30	grhl1 (ENSLBEG00000013232) #32	klf11b (ENSLBEG00000013189) #33	dnaaf2 (ENSLBEG00000013161)	lrr1 (ENSLBEG00000013147)	ENSLBEG00000013138	ENSLBEG00000013085
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Perciformes	ANCESTRAL SPECIES	12	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Pike perch	MODERN SPECIES	5	ENSSLUG00000020900	ENSSLUG00000020894	cga (ENSSLUG00000020889)	syncripl (ENSSLUG00000020262)	SNX14 (ENSSLUG00000018965)	nt5e (ENSSLUG00000018779)	ENSSLUG00000018750	myo6b (ENSSLUG00000014112)	colec11 (ENSSLUG00000013898)	ENSSLUG00000013873	sox11a (ENSSLUG00000013861)	CMPK2 (ENSSLUG00000013856) #19	rsad2 (ENSSLUG00000013832) #20	rnf144aa (ENSSLUG00000013822) #21	ENSSLUG00000013813	id2a (ENSSLUG00000013806) #22	KIDINS220 (ENSSLUG00000013706) #23	MBOAT2 (ENSSLUG00000013633) #24	asap2a (ENSSLUG00000013070) #25	itgb1bp1 (ENSSLUG00000013021) #26	CPSF3 (ENSSLUG00000012454) #27	ENSSLUG00000012398	iah1 (ENSSLUG00000012385) #28	adam17a (ENSSLUG00000012343) #29	ywhaqb (ENSSLUG00000012331) ##30	grhl1 (ENSSLUG00000012323) #32	klf11b (ENSSLUG00000012317) #33	dnaaf2 (ENSSLUG00000012314)	lrr1 (ENSSLUG00000012310)	ENSSLUG00000012305	RPAP1 (ENSSLUG00000012241)
Channel bull blenny	MODERN SPECIES	14	ENSCGOG00000021764	ENSCGOG00000021765	ENSCGOG00000021767	cga (ENSCGOG00000021768)	syncripl (ENSCGOG00000021780)	SNX14 (ENSCGOG00000022079)	nt5e (ENSCGOG00000022171)	HTR1B (ENSCGOG00000022185)	ENSCGOG00000022186	myo6b (ENSCGOG00000022238)	colec11 (ENSCGOG00000023415)	sox11a (ENSCGOG00000023417)	CMPK2 (ENSCGOG00000023419) #19	rsad2 (ENSCGOG00000023420) #20	rnf144aa (ENSCGOG00000023424) #21	id2a (ENSCGOG00000023437) #22	MBOAT2 (ENSCGOG00000023442) #24	asap2a (ENSCGOG00000023513) #25	itgb1bp1 (ENSCGOG00000023982) #26	CPSF3 (ENSCGOG00000023997) #27	DNAJC30 (ENSCGOG00000002696)	iah1 (ENSCGOG00000002724) #28	adam17a (ENSCGOG00000002865) #29	ywhaqb (ENSCGOG00000004370) ##30	grhl1 (ENSCGOG00000004378) #32	klf11b (ENSCGOG00000004442) #33	ENSCGOG00000004469	lrr1 (ENSCGOG00000004456)	ENSCGOG00000004470	ENSCGOG00000004493	ENSCGOG00000004830
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000168150.a	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Lumpfish	MODERN SPECIES	14	AKIRIN2 (ENSCLMG00005021622)	orc3 (ENSCLMG00005021601)	ENSCLMG00005021596	ENSCLMG00005021594	cga (ENSCLMG00005021590)	syncripl (ENSCLMG00005021544)	SNX14 (ENSCLMG00005021516)	ENSCLMG00005021512	HTR1B (ENSCLMG00005021511)	myo6b (ENSCLMG00005019728)	colec11 (ENSCLMG00005019691)	sox11a (ENSCLMG00005019689)	CMPK2 (ENSCLMG00005019688) #19	rsad2 (ENSCLMG00005019686) #20	rnf144aa (ENSCLMG00005019682) #21	id2a (ENSCLMG00005019678) #22	KIDINS220 (ENSCLMG00005019656) #23	MBOAT2 (ENSCLMG00005019260) #24	asap2a (ENSCLMG00005019112) #25	itgb1bp1 (ENSCLMG00005019106) #26	CPSF3 (ENSCLMG00005019097) #27	ENSCLMG00005019095	iah1 (ENSCLMG00005019093) #28	adam17a (ENSCLMG00005018220) #29	ywhaqb (ENSCLMG00005018194) ##30	grhl1 (ENSCLMG00005018181) #32	klf11b (ENSCLMG00005018177) #33	dnaaf2 (ENSCLMG00005018176)	lrr1 (ENSCLMG00005018174)	ENSCLMG00005018170	ENSCLMG00005018162
Stickleback	MODERN SPECIES	15	CNR1 (ENSGACG00000009189)	akirin2 (ENSGACG00000009179)	znf292a (ENSGACG00000009170)	cga (ENSGACG00000009153)	syncripl (ENSGACG00000009124)	SNX14 (ENSGACG00000009094)	HTR1B (ENSGACG00000009090)	ENSGACG00000009087	ENSGACG00000009073	colec11 (ENSGACG00000009068)	ENSGACG00000009067	sox11b (ENSGACG00000009065)	CMPK2 (ENSGACG00000009050) #19	rsad2 (ENSGACG00000009046) #20	rnf144aa (ENSGACG00000009031) #21	id2a (ENSGACG00000009030) #22	KIDINS220 (ENSGACG00000008998) #23	MBOAT2 (ENSGACG00000008968) #24	asap2a (ENSGACG00000008955) #25	itgb1bp1 (ENSGACG00000008941) #26	CPSF3 (ENSGACG00000008929) #27	iah1 (ENSGACG00000008923) #28	adam17a (ENSGACG00000008913) #29	ywhaqb (ENSGACG00000008849) ##30	grhl1 (ENSGACG00000008845) #32	klf11b (ENSGACG00000008836) #33	lrr1 (ENSGACG00000008822)	ENSGACG00000008818	ENSGACG00000008807	ltk (ENSGACG00000008800)	itpka (ENSGACG00000008795)
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602
Gilthead seabream	MODERN SPECIES	7	ENSSAUG00010026251	CMPK2 (ENSSAUG00010026241) #19	rsad2 (ENSSAUG00010026238) #20	rnf144aa (ENSSAUG00010026235) #21	ENSSAUG00010026231	ENSSAUG00010026230	KIDINS220 (ENSSAUG00010026205) #23	MBOAT2 (ENSSAUG00010026126) #24	asap2a (ENSSAUG00010026088) #25	ITGB1BP1 (ENSSAUG00010026080) #26	CPSF3 (ENSSAUG00010026070) #27	DNAJC30 (ENSSAUG00010026069)	iah1 (ENSSAUG00010026068) #28	adam17a (ENSSAUG00010026004) #29	ENSSAUG00010025994	id2a (ENSSAUG00010025993) #22	grhl1 (ENSSAUG00010025988) #32	ENSSAUG00010025984	dnaaf2 (ENSSAUG00010025983)	lrr1 (ENSSAUG00010025981)	ENSSAUG00010025980	RPAP1 (ENSSAUG00010025965)	ltk (ENSSAUG00010025825)	itpka (ENSSAUG00010025824)	ivd (ENSSAUG00010025821)	BAHD1 (ENSSAUG00010025818)	prlh2r (ENSSAUG00010025817)	ccdc32 (ENSSAUG00010025816)	pcmtl (ENSSAUG00010025814)	rpusd2 (ENSSAUG00010025813)	disp2 (ENSSAUG00010025811)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602
Large yellow croaker	MODERN SPECIES	495	orc3 (ENSLCRG00005011979)	znf292a (ENSLCRG00005012511)	cga (ENSLCRG00005012512)	syncripl (ENSLCRG00005012514)	SNX14 (ENSLCRG00005012664)	nt5e (ENSLCRG00005012675)	HTR1B (ENSLCRG00005012739)	ENSLCRG00005012741	myo6b (ENSLCRG00005012749)	colec11 (ENSLCRG00005012754)	ENSLCRG00005012756	sox11a (ENSLCRG00005012759)	CMPK2 (ENSLCRG00005012760) #19	Rsad2 (ENSLCRG00005012761) #20	rnf144aa (ENSLCRG00005012763) #21	id2a (ENSLCRG00005012765) #22	KIDINS220 (ENSLCRG00005012769) #23	MBOAT2 (ENSLCRG00005012815) #24	asap2a (ENSLCRG00005013183) #25	itgb1bp1 (ENSLCRG00005013206) #26	CPSF3 (ENSLCRG00005013210) #27	DNAJC30 (ENSLCRG00005013786)	iah1 (ENSLCRG00005013787) #28	adam17a (ENSLCRG00005013789) #29	ywhaqb (ENSLCRG00005014648) ##30	grhl1 (ENSLCRG00005014649) #32	ENSLCRG00005014654	dnaaf2 (ENSLCRG00005014655)	lrr1 (ENSLCRG00005014656)	ENSLCRG00005014659	RPAP1 (ENSLCRG00005014660)
European seabass	MODERN SPECIES	2	CNR1 (ENSDLAG00005032092)	orc3 (ENSDLAG00005000399)	znf292a (ENSDLAG00005000374)	cga (ENSDLAG00005000366)	SYNCRIP (ENSDLAG00005000325)	ENSDLAG00005000220	NT5E (ENSDLAG00005000098)	HTR1B (ENSDLAG00005000083)	ENSDLAG00005000076	MYO6 (ENSDLAG00005023283)	colec11 (ENSDLAG00005023271)	ENSDLAG00005023263	sox11a (ENSDLAG00005023259)	CMPK2 (ENSDLAG00005023255) #19	rsad2 (ENSDLAG00005030006) #20	id2a (ENSDLAG00005023242) #22	KIDINS220 (ENSDLAG00005023139) #23	MBOAT2 (ENSDLAG00005022959) #24	asap2a (ENSDLAG00005022506) #25	itgb1bp1 (ENSDLAG00005031190) #26	ENSDLAG00005022276	CPSF3 (ENSDLAG00005033990) #27	adam17a (ENSDLAG00005021725) #29	GRHL1 (ENSDLAG00005021618) #32	ENSDLAG00005029103	ENSDLAG00005031012 #33	ENSDLAG00005021601	ENSDLAG00005021510	ltk (ENSDLAG00005021193)	ENSDLAG00005021176	itpka (ENSDLAG00005028676)
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Climbing perch	MODERN SPECIES	13	ENSATEG00000030171	ENSATEG00000025822	ENSATEG00000028442	cga (ENSATEG00000013322)	SYNCRIP (ENSATEG00000013885)	ENSATEG00000013946	NT5E (ENSATEG00000014109)	ENSATEG00000014131	ENSATEG00000014143	colec11 (ENSATEG00000014201)	ENSATEG00000014222	sox11a (ENSATEG00000014241)	CMPK2 (ENSATEG00000014256) #19	rsad2 (ENSATEG00000014261) #20	rnf144aa (ENSATEG00000025612) #21	id2a (ENSATEG00000014295) #22	KIDINS220 (ENSATEG00000014330) #23	MBOAT2 (ENSATEG00000014426) #24	asap2a (ENSATEG00000014440) #25	itgb1bp1 (ENSATEG00000014508) #26	CPSF3 (ENSATEG00000014525) #27	ENSATEG00000026609	iah1 (ENSATEG00000014577) #28	adam17a (ENSATEG00000014598) #29	ENSATEG00000014650 ##30	grhl1 (ENSATEG00000014667) #32	ENSATEG00000014722 #33	ENSATEG00000028060	ENSATEG00000014750	ENSATEG00000028018	ENSATEG00000014787
Siamese fighting fish	MODERN SPECIES	12	ENSBSLG00000026520	ENSBSLG00000026519	cga (ENSBSLG00000026518)	SYNCRIP (ENSBSLG00000026517)	ENSBSLG00000026428	NT5E (ENSBSLG00000026405)	HTR1B (ENSBSLG00000026402)	ENSBSLG00000026399	myo6b (ENSBSLG00000026394)	colec11 (ENSBSLG00000026389)	ENSBSLG00000026388	sox11a (ENSBSLG00000026384)	CMPK2 (ENSBSLG00000026383) #19	rsad2 (ENSBSLG00000026381) #20	rnf144aa (ENSBSLG00000026379) #21	id2a (ENSBSLG00000026377) #22	KIDINS220 (ENSBSLG00000026360) #23	MBOAT2 (ENSBSLG00000026337) #24	asap2a (ENSBSLG00000026280) #25	itgb1bp1 (ENSBSLG00000026259) #26	CPSF3 (ENSBSLG00000026230) #27	DNAJC30 (ENSBSLG00000026205)	iah1 (ENSBSLG00000026202) #28	adam17a (ENSBSLG00000026081) #29	ywhaqb (ENSBSLG00000026032) ##30	grhl1 (ENSBSLG00000025998) #32	ENSBSLG00000025968	dnaaf2 (ENSBSLG00000025958)	lrr1 (ENSBSLG00000025941)	ENSBSLG00000025768	ENSBSLG00000025687
Zig-zag eel	MODERN SPECIES	14	orc3 (ENSMAMG00000007798)	ENSMAMG00000024627	ENSMAMG00000026472	cga (ENSMAMG00000007884)	SYNCRIP (ENSMAMG00000007903)	ENSMAMG00000007940	HTR1B (ENSMAMG00000007784)	ENSMAMG00000025443	MYO6 (ENSMAMG00000008169)	colec11 (ENSMAMG00000008241)	ENSMAMG00000008263	sox11a (ENSMAMG00000008318)	CMPK2 (ENSMAMG00000008329) #19	rsad2 (ENSMAMG00000008344) #20	rnf144aa (ENSMAMG00000008366) #21	id2a (ENSMAMG00000008374) #22	KIDINS220 (ENSMAMG00000008395) #23	MBOAT2 (ENSMAMG00000008701) #24	asap2a (ENSMAMG00000008768) #25	itgb1bp1 (ENSMAMG00000026643) #26	CPSF3 (ENSMAMG00000008835) #27	ENSMAMG00000027424	iah1 (ENSMAMG00000008879) #28	adam17a (ENSMAMG00000008896) #29	ENSMAMG00000008932 ##30	grhl1 (ENSMAMG00000008950) #32	ENSMAMG00000008992 #33	ENSMAMG00000000384	ENSMAMG00000000417	ENSMAMG00000000435	ENSMAMG00000000483
Carangaria	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Seriola	ANCESTRAL SPECIES	3	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.e #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Yellowtail amberjack	MODERN SPECIES	3229	orc3 (ENSSLDG00000003341)	znf292a (ENSSLDG00000003371)	cga (ENSSLDG00000003479)	syncripl (ENSSLDG00000003502)	SNX14 (ENSSLDG00000003610)	nt5e (ENSSLDG00000003971)	HTR1B (ENSSLDG00000004018)	ENSSLDG00000004047	myo6b (ENSSLDG00000004097)	colec11 (ENSSLDG00000004216)	ENSSLDG00000004259	sox11a (ENSSLDG00000004300)	CMPK2 (ENSSLDG00000004335) #19	rsad2 (ENSSLDG00000004353) #20	rnf144aa (ENSSLDG00000004405) #21	id2a (ENSSLDG00000004462) #22	KIDINS220 (ENSSLDG00000004570) #23	MBOAT2 (ENSSLDG00000005032) #24	asap2a (ENSSLDG00000005093) #25	itgb1bp1 (ENSSLDG00000005184) #26	CPSF3 (ENSSLDG00000005234) #27	DNAJC30 (ENSSLDG00000005316)	iah1 (ENSSLDG00000005332) #28	adam17a (ENSSLDG00000005376) #29	ywhaqb (ENSSLDG00000005453) ##30	grhl1 (ENSSLDG00000005479) #32	klf11b (ENSSLDG00000005520) #33	ENSSLDG00000005525	lrr1 (ENSSLDG00000005540)	ENSSLDG00000005569	RPAP1 (ENSSLDG00000005587)
Greater amberjack	MODERN SPECIES	62	orc3 (ENSSDUG00000017628)	znf292a (ENSSDUG00000017666)	cga (ENSSDUG00000017698)	syncripl (ENSSDUG00000017716)	SNX14 (ENSSDUG00000017749)	nt5e (ENSSDUG00000017875)	HTR1B (ENSSDUG00000017921)	ENSSDUG00000017930	MYO6 (ENSSDUG00000017969)	colec11 (ENSSDUG00000018038)	ENSSDUG00000018077	sox11a (ENSSDUG00000018094)	CMPK2 (ENSSDUG00000018105) #19	rsad2 (ENSSDUG00000018119) #20	rnf144aa (ENSSDUG00000018147) #21	id2a (ENSSDUG00000018183) #22	KIDINS220 (ENSSDUG00000018195) #23	MBOAT2 (ENSSDUG00000018300) #24	asap2a (ENSSDUG00000018351) #25	itgb1bp1 (ENSSDUG00000018462) #26	CPSF3 (ENSSDUG00000018498) #27	DNAJC30 (ENSSDUG00000018558)	iah1 (ENSSDUG00000018632) #28	adam17a (ENSSDUG00000018573) #29	ywhaqb (ENSSDUG00000018650) ##30	grhl1 (ENSSDUG00000018671) #32	klf11b (ENSSDUG00000018736) #33	ENSSDUG00000018753	lrr1 (ENSSDUG00000018764)	ENSSDUG00000018787	RPAP1 (ENSSDUG00000018797)
Barramundi perch	MODERN SPECIES	171										colec11 (ENSLCAG00010023232)	ENSLCAG00010023229	sox11a (ENSLCAG00010023224)	CMPK2 (ENSLCAG00010023220) #19	rsad2 (ENSLCAG00010023211) #20	rnf144aa (ENSLCAG00010023207) #21	id2a (ENSLCAG00010023201) #22	KIDINS220 (ENSLCAG00010023169) #23	MBOAT2 (ENSLCAG00010023139) #24	asap2a (ENSLCAG00010023094) #25	itgb1bp1 (ENSLCAG00010023072) #26	CPSF3 (ENSLCAG00010022901) #27	DNAJC30 (ENSLCAG00010022857)	iah1 (ENSLCAG00010022854) #28	adam17a (ENSLCAG00010022846) #29	ywhaqb (ENSLCAG00010022827) ##30	grhl1 (ENSLCAG00010022815) #32	klf11b (ENSLCAG00010022810) #33	ENSLCAG00010022809	lrr1 (ENSLCAG00010022806)	ENSLCAG00010022803	RPAP1 (ENSLCAG00010022790)
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00390000003365.b	ENSGT01060000248564.a.a.a.b	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594
Turbot	MODERN SPECIES	8	CNR1 (ENSSMAG00000020235)	ENSSMAG00000020247	orc3 (ENSSMAG00000020236)	znf292a (ENSSMAG00000020252)	ENSSMAG00000034135	cga (ENSSMAG00000020254)	SYNCRIP (ENSSMAG00000020337)	ENSSMAG00000020339	ENSSMAG00000020391	ENSSMAG00000020402	colec11 (ENSSMAG00000020438)	ENSSMAG00000020440	SOX11 (ENSSMAG00000020445)	ENSSMAG00000022504	rnf144aa (ENSSMAG00000020451) #21	id2a (ENSSMAG00000037449) #22	KIDINS220 (ENSSMAG00000020468) #23	MBOAT2 (ENSSMAG00000020503) #24	asap2a (ENSSMAG00000020510) #25	itgb1bp1 (ENSSMAG00000020525) #26	CPSF3 (ENSSMAG00000020534) #27	ENSSMAG00000020542	iah1 (ENSSMAG00000023064) #28	adam17a (ENSSMAG00000020548) #29	ENSSMAG00000020553 ##30	grhl1 (ENSSMAG00000020554) #32	ENSSMAG00000020566 #33	ENSSMAG00000020583	ENSSMAG00000020573	ENSSMAG00000020592	ENSSMAG00000020594
Tongue sole	MODERN SPECIES		WARS1 (ENSCSEG00000002340)	SLC25A29 (ENSCSEG00000002330)	soul3 (ENSCSEG00000002325)	ENSCSEG00000002313	dcdc2b (ENSCSEG00000002306)	tmem234 (ENSCSEG00000002305)	si:dkey-221l4.10 (ENSCSEG00000002303)	ENSCSEG00000002291	ENSCSEG00000002279	rps6ka1 (ENSCSEG00000002236)	cnksr1 (ENSCSEG00000002211)	ENSCSEG00000002206	ENSCSEG00000002194	nipal3 (ENSCSEG00000002185)	rcan3 (ENSCSEG00000002175)	id2a (ENSCSEG00000002172) #22	KIDINS220 (ENSCSEG00000002070) #23	MBOAT2 (ENSCSEG00000002048) #24	ENSCSEG00000002040	CPSF3 (ENSCSEG00000002021) #27	itgb1bp1 (ENSCSEG00000002006) #26	ENSCSEG00000002002	ENSCSEG00000002000	eml1 (ENSCSEG00000001974)	ENSCSEG00000001962	sowahcb (ENSCSEG00000001961)	disp2 (ENSCSEG00000001957)	rpusd2 (ENSCSEG00000001953)	pcmtl (ENSCSEG00000001948)	ccdc32 (ENSCSEG00000001943)	PRLHR (ENSCSEG00000001941)
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28
Oryzias	ANCESTRAL SPECIES	3	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594	ENSGT00940000164602
Oryzias_a	ANCESTRAL SPECIES	11	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000168150.a	ENSGT00530000063503.a.b.g.a.f	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594	ENSGT00940000164602
Japanese Medaka HdrR	MODERN SPECIES	14	AKIRIN2 (ENSORLG00000029748)	orc3 (ENSORLG00000014787)	znf292a (ENSORLG00000014801)	cga (ENSORLG00000022598)	syncripl (ENSORLG00000014840)	SNX14 (ENSORLG00000014899)	nt5e (ENSORLG00000014932)	ENSORLG00000030609	myo6b (ENSORLG00000014977)	colec11 (ENSORLG00000014991)	ENSORLG00000026148	sox11a (ENSORLG00000014996)	CMPK2 (ENSORLG00000025821) #19	rsad2 (ENSORLG00000020391) #20	rnf144aa (ENSORLG00000015013) #21	id2a (ENSORLG00000015015) #22	KIDINS220 (ENSORLG00000015049) #23	MBOAT2 (ENSORLG00000015073) #24	ENSORLG00000023641	asap2a (ENSORLG00000015141) #25	itgb1bp1 (ENSORLG00000015163) #26	ENSORLG00000015167	ENSORLG00000015168	lrr1 (ENSORLG00000015179)	dnaaf2 (ENSORLG00000028510)	klf11b (ENSORLG00000015191) #33	grhl1 (ENSORLG00000015232) #32	ywhaqb (ENSORLG00000015250) ##30	adam17a (ENSORLG00000015321) #29	iah1 (ENSORLG00000015337) #28	ENSORLG00000015409
Chinese medaka	MODERN SPECIES	1096																id2a (ENSOSIG00000020928) #22	KIDINS220 (ENSOSIG00000019798) #23	MBOAT2 (ENSOSIG00000019709) #24	asap2a (ENSOSIG00000019707) #25	lrr1 (ENSOSIG00000019706)	ENSOSIG00000019705	klf11b (ENSOSIG00000019704) #33	grhl1 (ENSOSIG00000019699) #32	ywhaqb (ENSOSIG00000019697) ##30	adam17a (ENSOSIG00000016439) #29	iah1 (ENSOSIG00000016374) #28	ltk (ENSOSIG00000016190)	itpka (ENSOSIG00000016182)	ivd (ENSOSIG00000016146)	BAHD1 (ENSOSIG00000016141)	PRLHR (ENSOSIG00000016139)
Oryzias_b	ANCESTRAL SPECIES	12	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594	ENSGT00940000164602
Indian medaka	MODERN SPECIES		znf292a (ENSOMEG00000009670)	cga (ENSOMEG00000009616)	syncripl (ENSOMEG00000009597)	SNX14 (ENSOMEG00000009486)	nt5e (ENSOMEG00000009231)	HTR1B (ENSOMEG00000009193)	ENSOMEG00000009169	myo6b (ENSOMEG00000009075)	colec11 (ENSOMEG00000008834)	ENSOMEG00000008800	sox11a (ENSOMEG00000008780)	CMPK2 (ENSOMEG00000008757) #19	rsad2 (ENSOMEG00000008741) #20	rnf144aa (ENSOMEG00000008683) #21	KIDINS220 (ENSOMEG00000008505) #23	id2a (ENSOMEG00000008195) #22	MBOAT2 (ENSOMEG00000008176) #24	asap2a (ENSOMEG00000008132) #25	itgb1bp1 (ENSOMEG00000008093) #26	ENSOMEG00000008064	ENSOMEG00000008058	lrr1 (ENSOMEG00000008045)	ENSOMEG00000008025	klf11b (ENSOMEG00000008015) #33	grhl1 (ENSOMEG00000008000) #32	ywhaqb (ENSOMEG00000007953) ##30	adam17a (ENSOMEG00000007900) #29	iah1 (ENSOMEG00000007787) #28	ENSOMEG00000007729	ltk (ENSOMEG00000007600)	itpka (ENSOMEG00000007544)
Javanese ricefish	MODERN SPECIES	14	CNR1 (ENSOJAG00000021236)	akirin2 (ENSOJAG00000021234)	orc3 (ENSOJAG00000020829)	znf292a (ENSOJAG00000020729)	cga (ENSOJAG00000020712)	syncripl (ENSOJAG00000020465)	SNX14 (ENSOJAG00000019816)	nt5e (ENSOJAG00000019656)	HTR1B (ENSOJAG00000019625)	myo6b (ENSOJAG00000019470)	colec11 (ENSOJAG00000019439)	sox11a (ENSOJAG00000019428)	CMPK2 (ENSOJAG00000019419) #19	rsad2 (ENSOJAG00000019358) #20	rnf144aa (ENSOJAG00000019341) #21	id2a (ENSOJAG00000019329) #22	KIDINS220 (ENSOJAG00000019184) #23	MBOAT2 (ENSOJAG00000019109) #24	asap2a (ENSOJAG00000018295) #25	itgb1bp1 (ENSOJAG00000018214) #26	DNAJC30 (ENSOJAG00000018194)	ENSOJAG00000018166	lrr1 (ENSOJAG00000018152)	DNAAF2 (ENSOJAG00000018144)	ENSOJAG00000018136	grhl1 (ENSOJAG00000018002) #32	ywhaqb (ENSOJAG00000017980) ##30	adam17a (ENSOJAG00000017332) #29	iah1 (ENSOJAG00000017276) #28	ltk (ENSOJAG00000016198)	itpka (ENSOJAG00000016118)
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32
Aplocheiloidei	ANCESTRAL SPECIES	15	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT00390000003967.a	ENSGT00940000158100	ENSGT00940000166410	ENSGT00940000164602	ENSGT00390000007594
Turquoise killifish	MODERN SPECIES	1625	znf292a (ENSNFUG00015008837)	cga (ENSNFUG00015008843)	SYNCRIPL (ENSNFUG00015008875)	SNX14 (ENSNFUG00015009489)	HTR1B (ENSNFUG00015009723)	ENSNFUG00015009735	myo6b (ENSNFUG00015009873)	colec11 (ENSNFUG00015010183)	ENSNFUG00015010280	ENSNFUG00015010291	sox11a (ENSNFUG00015010294)	CMPK2 (ENSNFUG00015010303) #19	RSAD2 (ENSNFUG00015010312) #20	RNF144AA (ENSNFUG00015010324) #21	ENSNFUG00015010338	ID2 (ENSNFUG00015010343) #22	KIDINS220 (ENSNFUG00015010375) #23	MBOAT2A (ENSNFUG00015010505) #24	asap2a (ENSNFUG00015011782) #25	ITGB1BP1 (ENSNFUG00015019885) #26	CPSF3 (ENSNFUG00015019899) #27	DNAJC30 (ENSNFUG00015019949)	ENSNFUG00015019955	LRR1 (ENSNFUG00015019957)	dnaaf2 (ENSNFUG00015019960)	KLF11B (ENSNFUG00015019964) #33	grhl1 (ENSNFUG00015019980) #32	ENSNFUG00015020025	ivd (ENSNFUG00015020035)	ITPKA (ENSNFUG00015020139)	ltk (ENSNFUG00015020170)
Mangrove rivulus	MODERN SPECIES	1	CNR1 (ENSKMAG00000008555)	orc3 (ENSKMAG00000008522)	znf292a (ENSKMAG00000008508)	cga (ENSKMAG00000008463)	syncripl (ENSKMAG00000008428)	SNX14 (ENSKMAG00000008141)	HTR1B (ENSKMAG00000008060)	ENSKMAG00000008023	myo6b (ENSKMAG00000007926)	colec11 (ENSKMAG00000007884)	ENSKMAG00000007798	sox11a (ENSKMAG00000007776)	CMPK2 (ENSKMAG00000007763) #19	rsad2 (ENSKMAG00000007745) #20	rnf144aa (ENSKMAG00000007711) #21	id2a (ENSKMAG00000007700) #22	KIDINS220 (ENSKMAG00000007490) #23	MBOAT2 (ENSKMAG00000007430) #24	asap2a (ENSKMAG00000007390) #25	itgb1bp1 (ENSKMAG00000007363) #26	CPSF3 (ENSKMAG00000007317) #27	ENSKMAG00000007295	lrr1 (ENSKMAG00000007271)	dnaaf2 (ENSKMAG00000007233)	klf11b (ENSKMAG00000007225) #33	grhl1 (ENSKMAG00000007146) #32	ENSKMAG00000007112	ivd (ENSKMAG00000007064)	itpka (ENSKMAG00000007012)	ltk (ENSKMAG00000006904)	RPAP1 (ENSKMAG00000006842)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.b #27	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.b #27	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.b #27	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582
NAME_6	ANCESTRAL SPECIES	192								ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.b #27	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01030000235064	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582
Amazon molly	MODERN SPECIES	428							ENSPFOG00000012635	MYO6 (ENSPFOG00000012146)	colec11 (ENSPFOG00000012098)	ENSPFOG00000012080	sox11a (ENSPFOG00000012067)	sox11a (ENSPFOG00000012053)	CMPK2 (ENSPFOG00000012030) #19	rsad2 (ENSPFOG00000011996) #20	rnf144aa (ENSPFOG00000011914) #21	id2a (ENSPFOG00000011911) #22	KIDINS220 (ENSPFOG00000011369) #23	MBOAT2 (ENSPFOG00000011153) #24	asap2a (ENSPFOG00000010657) #25	itgb1bp1 (ENSPFOG00000010590) #26	DNAJC30 (ENSPFOG00000019928)	CPSF3 (ENSPFOG00000010418) #27	ENSPFOG00000019927	ENSPFOG00000010399	kdm1a (ENSPFOG00000010119)	tmem30b (ENSPFOG00000010043)	DYNC1H1 (ENSPFOG00000008709)	WDR20 (ENSPFOG00000008646)	MOK (ENSPFOG00000008579)	NEMF (ENSPFOG00000008250)	KLHDC2 (ENSPFOG00000007953)
Sailfin molly	MODERN SPECIES	1764																id2a (ENSPLAG00000005213) #22
NAME_4	ANCESTRAL SPECIES	105	ENSGT01060000248564.a.a.a.b	ENSGT00940000156096.e.a	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.b #27	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01020000230703	ENSGT00940000156103	ENSGT01030000235064	ENSGT00390000007686.b.c.b
Mummichog	MODERN SPECIES	2244	CNR1 (ENSFHEG00000013716)	akirin2 (ENSFHEG00000013676)	orc3 (ENSFHEG00000013616)	znf292a (ENSFHEG00000013010)	cga (ENSFHEG00000013002)	syncripl (ENSFHEG00000012955)	SNX14 (ENSFHEG00000012903)	HTR1B (ENSFHEG00000012822)	myo6b (ENSFHEG00000012801)	colec11 (ENSFHEG00000012712)	ENSFHEG00000012664	sox11a (ENSFHEG00000012641)	CMPK2 (ENSFHEG00000012621) #19	rsad2 (ENSFHEG00000012614) #20	rnf144aa (ENSFHEG00000012596) #21	id2a (ENSFHEG00000012574) #22	KIDINS220 (ENSFHEG00000012566) #23	MBOAT2 (ENSFHEG00000012500) #24	asap2a (ENSFHEG00000012429) #25	itgb1bp1 (ENSFHEG00000012238) #26	ENSFHEG00000012215 #27	CPSF3 (ENSFHEG00000012186) #27	DNAJC30 (ENSFHEG00000012148)	ENSFHEG00000012134	ENSFHEG00000012123	kdm1a (ENSFHEG00000012094)	tmem30b (ENSFHEG00000011973)	DYNC1H1 (ENSFHEG00000011956)	ENSFHEG00000011890	ENSFHEG00000011881	ENSFHEG00000011872
Sheepshead minnow	MODERN SPECIES	593															ENSCVAG00000007653	id2a (ENSCVAG00000007662) #22	ENSCVAG00000007667
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28
Pomacentridae	ANCESTRAL SPECIES	19	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594
Bicolor damselfish	MODERN SPECIES	1394															rnf144aa (ENSSPAG00000009638) #21	id2a (ENSSPAG00000009663) #22
Pomacentridae_A	ANCESTRAL SPECIES	19	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594
Amphiprion	ANCESTRAL SPECIES	12	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594
Clown anemonefish	MODERN SPECIES	623														rnf144aa (ENSAOCG00000010367) #21	ENSAOCG00000010360	id2a (ENSAOCG00000010346) #22	KIDINS220 (ENSAOCG00000010304) #23	MBOAT2 (ENSAOCG00000010155) #24	asap2a (ENSAOCG00000010132) #25	itgb1bp1 (ENSAOCG00000010105) #26	CPSF3 (ENSAOCG00000010077) #27	ENSAOCG00000010017	ENSAOCG00000010004	lrr1 (ENSAOCG00000009990)	ENSAOCG00000009963	klf11b (ENSAOCG00000009957) #33	grhl1 (ENSAOCG00000009930) #32	ENSAOCG00000009844	adam17a (ENSAOCG00000009796) #29	iah1 (ENSAOCG00000009714) #28	RPAP1 (ENSAOCG00000009681)
Orange clownfish	MODERN SPECIES	9	orc3 (ENSAPEG00000019356)	znf292a (ENSAPEG00000019624)	cga (ENSAPEG00000019701)	syncripl (ENSAPEG00000020251)	SNX14 (ENSAPEG00000020310)	nt5e (ENSAPEG00000020431)	HTR1B (ENSAPEG00000020445)	ENSAPEG00000020461	myo6b (ENSAPEG00000020486)	colec11 (ENSAPEG00000020543)	ENSAPEG00000020558	sox11a (ENSAPEG00000020575)	CMPK2 (ENSAPEG00000020584) #19	rsad2 (ENSAPEG00000020627) #20	rnf144aa (ENSAPEG00000020647) #21	id2a (ENSAPEG00000020671) #22	KIDINS220 (ENSAPEG00000020697) #23	MBOAT2 (ENSAPEG00000020881) #24	asap2a (ENSAPEG00000021017) #25	itgb1bp1 (ENSAPEG00000021111) #26	CPSF3 (ENSAPEG00000021167) #27	ENSAPEG00000021253	ENSAPEG00000021268	lrr1 (ENSAPEG00000021284)	ENSAPEG00000021304	klf11b (ENSAPEG00000021311) #33	grhl1 (ENSAPEG00000021330) #32	ENSAPEG00000021422	adam17a (ENSAPEG00000021451) #29	iah1 (ENSAPEG00000021499) #28	RPAP1 (ENSAPEG00000021512)
Spiny chromis	MODERN SPECIES	13	HTR1B (ENSAPOG00000013604)	akirin2 (ENSAPOG00000013585)	orc3 (ENSAPOG00000013547)	znf292a (ENSAPOG00000013515)	cga (ENSAPOG00000013410)	syncripl (ENSAPOG00000013389)	SNX14 (ENSAPOG00000013313)	nt5e (ENSAPOG00000013170)	myo6b (ENSAPOG00000012997)	colec11 (ENSAPOG00000012840)	ENSAPOG00000012793	sox11a (ENSAPOG00000012759)	rsad2 (ENSAPOG00000012740) #20	CMPK2 (ENSAPOG00000012698) #19	rnf144aa (ENSAPOG00000012675) #21	id2a (ENSAPOG00000012632) #22	KIDINS220 (ENSAPOG00000012604) #23	MBOAT2 (ENSAPOG00000012495) #24	asap2a (ENSAPOG00000012445) #25	itgb1bp1 (ENSAPOG00000012283) #26	CPSF3 (ENSAPOG00000012241) #27
Cichlidae	ANCESTRAL SPECIES	22	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00940000153676.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00940000153676.a
Nile tilapia	MODERN SPECIES	10	orc3 (ENSONIG00000003618)	znf292a (ENSONIG00000036202)	cga (ENSONIG00000029454)	syncripl (ENSONIG00000003626)	SNX14 (ENSONIG00000003627)	nt5e (ENSONIG00000003636)	HTR1B (ENSONIG00000020630)	ENSONIG00000003638	myo6b (ENSONIG00000003639)	colec11 (ENSONIG00000003648)	ENSONIG00000003654	sox11a (ENSONIG00000020631)	CMPK2 (ENSONIG00000003657) #19	rsad2 (ENSONIG00000003658) #20	rnf144aa (ENSONIG00000003661) #21	id2a (ENSONIG00000003666) #22	KIDINS220 (ENSONIG00000003667) #23	MBOAT2 (ENSONIG00000003677) #24	asap2a (ENSONIG00000003679) #25	itgb1bp1 (ENSONIG00000003692) #26	CPSF3 (ENSONIG00000003694) #27	DNAJC30 (ENSONIG00000003697)	ENSONIG00000037802	ENSONIG00000003699	lrr1 (ENSONIG00000041270)	ENSONIG00000003703	klf11 (ENSONIG00000003704) #33	grhl1 (ENSONIG00000003707) #32	ywhaqb (ENSONIG00000003712) ##30	adam17a (ENSONIG00000003714) #29	ENSONIG00000036047
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #33	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00940000153676.a
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT00490000044642.a.a.a.a.a.b.b.d
Burton s mouthbrooder	MODERN SPECIES	606											sox11a (ENSHBUG00000002773)	CMPK2 (ENSHBUG00000002753) #19	rsad2 (ENSHBUG00000002743) #20	rnf144aa (ENSHBUG00000002736) #21	supt4h1 (ENSHBUG00000000848)	id2a (ENSHBUG00000002722) #22	KIDINS220 (ENSHBUG00000002685) #23	MBOAT2 (ENSHBUG00000002536) #24	ENSHBUG00000002509 #25
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT00490000044642.a.a.a.a.a.b.b.d
P. nyererei	MODERN SPECIES	305	akirin2 (ENSPNYG00000020276)	orc3 (ENSPNYG00000020295)	znf292a (ENSPNYG00000020334)	cga (ENSPNYG00000020359)	syncripl (ENSPNYG00000020378)	SNX14 (ENSPNYG00000020425)	nt5e (ENSPNYG00000020564)	HTR1B (ENSPNYG00000020596)	myo6b (ENSPNYG00000020617)	colec11 (ENSPNYG00000020689)	ENSPNYG00000020715	sox11a (ENSPNYG00000020727)	CMPK2 (ENSPNYG00000020756) #19	rsad2 (ENSPNYG00000020767) #20	rnf144aa (ENSPNYG00000020780) #21	id2a (ENSPNYG00000020798) #22	KIDINS220 (ENSPNYG00000020827) #23	MBOAT2 (ENSPNYG00000020920) #24	asap2a (ENSPNYG00000020960) #25	itgb1bp1 (ENSPNYG00000021027) #26	CPSF3 (ENSPNYG00000021047) #27	ENSPNYG00000021077	lrr1 (ENSPNYG00000021083)	ENSPNYG00000021095	ENSPNYG00000021117	grhl1 (ENSPNYG00000021143) #32	ywhaqb (ENSPNYG00000021165) ##30	adam17a (ENSPNYG00000021186) #29	ENSPNYG00000021263	iah1 (ENSPNYG00000021313) #28	ENSPNYG00000021343
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00390000011376	ENSGT00950000183034.C.a.b	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00940000155699.a.b #27	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #32	ENSGT01090000260040.b.b.b.a.n ##30	ENSGT00940000155443.c #29	ENSGT00390000008069 #28	ENSGT00390000007594.e	ENSGT00940000164602
Zebra mbuna	MODERN SPECIES	1101	akirin2 (ENSMZEG00005005420)	orc3 (ENSMZEG00005005445)	znf292a (ENSMZEG00005005464)	cga (ENSMZEG00005005501)	syncripl (ENSMZEG00005005512)	SNX14 (ENSMZEG00005005563)	nt5e (ENSMZEG00005005679)	HTR1B (ENSMZEG00005005700)	myo6b (ENSMZEG00005005718)	colec11 (ENSMZEG00005005759)	sox11a (ENSMZEG00005005783)	CMPK2 (ENSMZEG00005005795) #19	rsad2 (ENSMZEG00005005804) #20	rnf144aa (ENSMZEG00005005823) #21	ENSMZEG00005005837	id2a (ENSMZEG00005005852) #22	KIDINS220 (ENSMZEG00005005897) #23	MBOAT2 (ENSMZEG00005006092) #24	asap2a (ENSMZEG00005006144) #25	itgb1bp1 (ENSMZEG00005006230) #26	CPSF3 (ENSMZEG00005006258) #27	ENSMZEG00005006331	ENSMZEG00005006350	lrr1 (ENSMZEG00005006361)	ENSMZEG00005006380	ENSMZEG00005006395	grhl1 (ENSMZEG00005006420) #32	ywhaqb (ENSMZEG00005006438) ##30	adam17a (ENSMZEG00005006451) #29	ENSMZEG00005006476	iah1 (ENSMZEG00005006516) #28
Eastern happy	MODERN SPECIES	10	znf292a (ENSACLG00000017305)	cga (ENSACLG00000017361)	syncripl (ENSACLG00000017401)	SNX14 (ENSACLG00000017437)	nt5e (ENSACLG00000017921)	HTR1B (ENSACLG00000017966)	ENSACLG00000017993	myo6b (ENSACLG00000018057)	colec11 (ENSACLG00000018173)	ENSACLG00000018201	sox11a (ENSACLG00000018253)	CMPK2 (ENSACLG00000018300) #19	rsad2 (ENSACLG00000018305) #20	rnf144aa (ENSACLG00000018318) #21	ENSACLG00000018346	id2a (ENSACLG00000018370) #22	KIDINS220 (ENSACLG00000018395) #23	MBOAT2 (ENSACLG00000018621) #24	asap2a (ENSACLG00000018689) #25	itgb1bp1 (ENSACLG00000018819) #26	CPSF3 (ENSACLG00000018846) #27	DNAJC30 (ENSACLG00000018883)	ENSACLG00000018896	lrr1 (ENSACLG00000018902)	ENSACLG00000018923	ENSACLG00000018930	grhl1 (ENSACLG00000018976) #32	ywhaqb (ENSACLG00000019060) ##30	ENSACLG00000019091 #28	ENSACLG00000019107	ltk (ENSACLG00000019181)
Lyretail cichlid	MODERN SPECIES	299								HTR1B (ENSNBRG00000011065)	ENSNBRG00000011048	myo6b (ENSNBRG00000010983)	colec11 (ENSNBRG00000010953)	sox11a (ENSNBRG00000010925)	CMPK2 (ENSNBRG00000010902) #19	rsad2 (ENSNBRG00000010881) #20	rnf144aa (ENSNBRG00000010857) #21	id2a (ENSNBRG00000010844) #22	KIDINS220 (ENSNBRG00000010767) #23	MBOAT2 (ENSNBRG00000010697) #24	ENSNBRG00000010674	ENSNBRG00000010603 #25	itgb1bp1 (ENSNBRG00000010578) #26	CPSF3 (ENSNBRG00000010525) #27	DNAJC30 (ENSNBRG00000010503)	ENSNBRG00000010486	lrr1 (ENSNBRG00000010478)	ENSNBRG00000010465	klf11b (ENSNBRG00000010457) #33	grhl1 (ENSNBRG00000010427) #32	ywhaqb (ENSNBRG00000010401) ##30	adam17a (ENSNBRG00000010379) #29	ENSNBRG00000010350
Midas cichlid	MODERN SPECIES	504	HTR1B (ENSACIG00000023480)	akirin2 (ENSACIG00000023482)	orc3 (ENSACIG00000023495)	znf292a (ENSACIG00000023531)	cga (ENSACIG00000023541)	syncripl (ENSACIG00000023552)	SNX14 (ENSACIG00000023560)	nt5e (ENSACIG00000023576)	ENSACIG00000023589	colec11 (ENSACIG00000023591)	ENSACIG00000023597	sox11a (ENSACIG00000023604)	CMPK2 (ENSACIG00000023607) #19	rsad2 (ENSACIG00000023611) #20	rnf144aa (ENSACIG00000023614) #21	id2a (ENSACIG00000023623) #22	KIDINS220 (ENSACIG00000023634) #23	MBOAT2 (ENSACIG00000023644) #24	asap2a (ENSACIG00000023651) #25	itgb1bp1 (ENSACIG00000023656) #26	CPSF3 (ENSACIG00000023663) #27	ENSACIG00000023669	ENSACIG00000023673	lrr1 (ENSACIG00000023676)	dnaaf2 (ENSACIG00000023679)	klf11b (ENSACIG00000023687) #33	grhl1 (ENSACIG00000023709) #32	ywhaqb (ENSACIG00000023775) ##30	adam17a (ENSACIG00000023988) #29	ENSACIG00000023993	iah1 (ENSACIG00000023998) #28
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	16	ENSMMDG00005018497	ENSMMDG00005018498	ENSMMDG00005018500	ENSMMDG00005018502	ENSMMDG00005018504	ENSMMDG00005018505	ENSMMDG00005018508	ENSMMDG00005018509	ENSMMDG00005018510	ENSMMDG00005018511	ENSMMDG00005018512	ENSMMDG00005018513	ENSMMDG00005018514	ENSMMDG00005018515	ENSMMDG00005018517	ENSMMDG00005018527 #22	kidins220b (ENSMMDG00005018530) #23	ENSMMDG00005018701	mboat2b (ENSMMDG00005018704) #24	cep43 (ENSMMDG00005018842)	ccr6a (ENSMMDG00005018845)	ENSMMDG00005018849	ENSMMDG00005018850	ENSMMDG00005018851	ENSMMDG00005018852	ENSMMDG00005018854	ENSMMDG00005018856	ENSMMDG00005018858	ENSMMDG00005018859	ENSMMDG00005018861	ENSMMDG00005018864
Pinecone sodierfish	MODERN SPECIES	14	znf292a (ENSMMDG00005003844)	cga (ENSMMDG00005003860)	syncripl (ENSMMDG00005003899)	SNX14 (ENSMMDG00005005631)	nt5e (ENSMMDG00005005658)	HTR1B (ENSMMDG00005006213)	ENSMMDG00005006216	myo6b (ENSMMDG00005006304)	colec11 (ENSMMDG00005008276)	ENSMMDG00005008280	sox11a (ENSMMDG00005008290)	CMPK2 (ENSMMDG00005008293) #19	rsad2 (ENSMMDG00005008298) #20	rnf144aa (ENSMMDG00005008304) #21	ENSMMDG00005008305	id2a (ENSMMDG00005008308) #22	KIDINS220 (ENSMMDG00005008339) #23	MBOAT2 (ENSMMDG00005009539) #24	asap2a (ENSMMDG00005009659) #25	itgb1bp1 (ENSMMDG00005009894) #26	CPSF3 (ENSMMDG00005009911) #27	DNAJC30 (ENSMMDG00005009999)	iah1 (ENSMMDG00005010004) #28	adam17a (ENSMMDG00005010057) #29	ywhaqa (ENSMMDG00005013779) ##30	grhl1 (ENSMMDG00005013786) #32	klf11b (ENSMMDG00005013797) #33	ENSMMDG00005013801	lrr1 (ENSMMDG00005013803)	ENSMMDG00005013806	RPAP1 (ENSMMDG00005013823)
Protacanthopterygii	ANCESTRAL SPECIES	72	ENSGT01010000222287.B.b.a.a.b.b	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b.p	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670 #20	ENSGT00940000157701 #21	ENSGT00940000156464 #22	ENSGT00940000156714.b #23	ENSGT01030000234564.a.a.a.a.b.b #24	ENSGT00940000155734	ENSGT00940000156714.a #23	ENSGT01030000234564.a.a.a.a.b.a #24	ENSGT00940000155623 #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c #29	ENSGT01090000260040.b.b.b.a.m.a.a ##30	ENSGT00940000157612 #32	ENSGT00940000155982.e.a #33	ENSGT00940000157136.a	ENSGT00950000183149.C.a	ENSGT00940000155500.e
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	13	taf1a (ENSELUG00000013392)	ENSELUG00000013328	aida (ENSELUG00000013217)	rnf8 (ENSELUG00000013198)	TCTE1 (ENSELUG00000013188)	tmem151ba (ENSELUG00000013166)	nfkbie (ENSELUG00000013153)	slc35b2 (ENSELUG00000013109)	hsp90ab1 (ENSELUG00000013060)	nfkbiaa (ENSELUG00000013024)	psma6b (ENSELUG00000013006)	zgc:153383 (ENSELUG00000012982)	ENSELUG00000030232	ENSELUG00000032191	ENSELUG00000033276 #21	id2b (ENSELUG00000012805) #22	ENSELUG00000012503	kidins220b (ENSELUG00000012717) #23	mboat2b (ENSELUG00000012487) #24	e2f6 (ENSELUG00000012437)	asap2b (ENSELUG00000012413)	ENSELUG00000012340	ENSELUG00000012347	ENSELUG00000012322	b2ml (ENSELUG00000033862)	b2ml (ENSELUG00000033258)	B2MG (ENSELUG00000024345)	tmbim4 (ENSELUG00000030724)	ENSELUG00000031825	wif1 (ENSELUG00000012238)	lemd3 (ENSELUG00000012187)
Northern pike	MODERN SPECIES	14	cga (ENSELUG00000013829)	HTR1E (ENSELUG00000013534)	syncripl (ENSELUG00000013519)	SNX14 (ENSELUG00000013475)	HTR1B (ENSELUG00000013987)	ENSELUG00000013418	myo6b (ENSELUG00000013359)	ENSELUG00000013298	colec11 (ENSELUG00000013277)	ENSELUG00000013259	sox11a (ENSELUG00000013220)	CMPK2 (ENSELUG00000013201) #19	rsad2 (ENSELUG00000013184) #20	rnf144aa (ENSELUG00000013127) #21	ENSELUG00000024674	id2 (ENSELUG00000013072) #22	KIDINS220 (ENSELUG00000013043) #23	MBOAT2 (ENSELUG00000012971) #24	ENSELUG00000032775	ENSELUG00000032565	asap2a (ENSELUG00000012839) #25	itgb1bp1 (ENSELUG00000024673) #26	iah1 (ENSELUG00000012701) #28	adam17a (ENSELUG00000012677) #29	ywhaqb (ENSELUG00000012647) ##30	grhl1 (ENSELUG00000012598) #32	klf11b (ENSELUG00000012527) #33	znf395a (ENSELUG00000012502)	ENSELUG00000012441	KIF13B (ENSELUG00000012362)	hmbox1a (ENSELUG00000012058)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000156464.lb #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000156464.lb #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000156464.lb #22
Atlantic salmon	MODERN SPECIES	28	SYNCRIP (ENSSSAG00000003635)	SNX14 (ENSSSAG00000003719)	ENSSSAG00000003809	ENSSSAG00000004024	ENSSSAG00000110757	colec11 (ENSSSAG00000112987)	ENSSSAG00000113597	sox11a (ENSSSAG00000085815)	cmpk2 (ENSSSAG00000007886) #19	rsad2 (ENSSSAG00000108937) #20	rsad2 (ENSSSAG00000106505) #20	rsad2 (ENSSSAG00000108840) #20	rnf144aa (ENSSSAG00000007924) #21	ENSSSAG00000018542	ENSSSAG00000089206	ID2 (ENSSSAG00000121872) #22	KIDINS220 (ENSSSAG00000008076) #23	ENSSSAG00000093491	MBOAT2 (ENSSSAG00000118144) #24	asap2a (ENSSSAG00000015430) #25	itgb1bp1 (ENSSSAG00000044455) #26	iah1 (ENSSSAG00000044498) #28	adam17a (ENSSSAG00000044555) #29	1433b (ENSSSAG00000045629) ##30	GRHL1 (ENSSSAG00000045675) #32	ENSSSAG00000046216	znf395a (ENSSSAG00000046223)	ENSSSAG00000114233	ENSSSAG00000046229	ENSSSAG00000046425	hmbox1a (ENSSSAG00000107279)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	984														ENSGT00940000161652.b.b.p.b.a	ENSGT00940000157701.k.a #21	ENSGT00940000156464.mb.a.a #22	ENSGT00940000156714.b.e #23	ENSGT01030000234564.a.a.a.a.b.b.a.b #24	ENSGT00940000155623.ib.b.b #25
Huchen	MODERN SPECIES	2267													ENSHHUG00000048196	ENSHHUG00000048202 #21	ENSHHUG00000048257	id2b (ENSHHUG00000048259) #22	kidins220b (ENSHHUG00000048265) #23	mboat2b (ENSHHUG00000048578) #24
Salmoninae_a	ANCESTRAL SPECIES	42	ENSGT00940000157671.g	ENSGT00950000182767.a.g	ENSGT01100000263547.a.b.b.a.a.a.b.a	ENSGT00400000022349.c	ENSGT01010000229533	ENSGT00940000159341	ENSGT00390000013762.b.a.a.a.a	ENSGT00940000159120.f.c	ENSGT00940000157927.j	ENSGT01020000230401.a.a.a.c	ENSGT00940000163080.a.e	ENSGT00550000074807.d.a.a.a.b	ENSGT00390000016736.a.j	ENSGT00940000161652.b.b.p.b.a	ENSGT00940000157701.k.a #21	ENSGT00940000156464.mb.a.a #22	ENSGT00940000156714.b.e #23	ENSGT01030000234564.a.a.a.a.b.b.a.b #24	ENSGT01000000220856	ENSGT00940000155623.ib.b.b #25	ENSGT00940000155443.d.j #29	ENSGT01090000260040.b.b.b.a.m.a.b.b ##30	ENSGT00940000157612.b.b #32	ENSGT00940000155982.e.b.h #33	ENSGT00390000013305.a.a.c #35	ENSGT00940000156483.h.b.e	ENSGT00390000008642.w.b	ENSGT00940000155634.q.b.d	ENSGT00940000161252.h.k	ENSGT00940000157012.l.d	ENSGT00940000163429.A
Oncorhynchus	ANCESTRAL SPECIES	35	ENSGT00940000157671.g	ENSGT00950000182767.a.g	ENSGT01100000263547.a.b.b.a.a.a.b.a	ENSGT00400000022349.c	ENSGT01010000229533	ENSGT00940000159341	ENSGT00390000013762.b.a.a.a.a	ENSGT00940000159120.f.c	ENSGT00940000157927.j	ENSGT01020000230401.a.a.a.c	ENSGT00940000163080.a.e	ENSGT00550000074807.d.a.a.a.b	ENSGT00390000016736.a.j	ENSGT00940000161652.b.b.p.b.a	ENSGT00940000157701.k.a #21	ENSGT00940000156464.mb.a.a #22	ENSGT00940000156714.b.e #23	ENSGT01030000234564.a.a.a.a.b.b.a.b #24	ENSGT01000000220856	ENSGT00940000155623.ib.b.b #25	ENSGT00940000155443.d.j #29	ENSGT01090000260040.b.b.b.a.m.a.b.b ##30	ENSGT00940000157612.b.b #32	ENSGT00940000155982.e.b.h #33	ENSGT00390000013305.a.a.c #35	ENSGT00940000156483.h.b.e	ENSGT00940000155634.q.b.d	ENSGT00940000161252.h.k	ENSGT00940000157012.l.d	ENSGT00940000163429.B	ENSGT00940000163429.C.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	53														ENSGT00940000161652.b.b.p.b.a	ENSGT00940000157701.k.a #21	ENSGT00940000156464.mb.a.a #22	ENSGT00940000156714.b.e #23	ENSGT01030000234564.a.a.a.a.b.b.a.b #24	ENSGT00940000155623.ib.b.b #25	ENSGT00940000155443.d.j #29	ENSGT01090000260040.b.b.b.a.m.a.b.b ##30	ENSGT00940000157612.b.b #32	ENSGT00940000155982.e.b.h #33	ENSGT00390000013305.a.a.c #35	ENSGT00940000156483.h.b.e	ENSGT00940000155634.q.b.d	ENSGT00940000161252.h.k	ENSGT00940000157012.l.d	ENSGT00940000163429.B	ENSGT00940000163429.C.a.b	ENSGT00800000125320
Chinook salmon	MODERN SPECIES	29	ENSOTSG00005029719	ENSOTSG00005029720	rnf8 (ENSOTSG00005029721)	TCTE1 (ENSOTSG00005029722)	tmem151ba (ENSOTSG00005029723)	nfkbie (ENSOTSG00005029724)	slc35b2 (ENSOTSG00005029725)	hsp90ab1 (ENSOTSG00005029732)	nfkbiaa (ENSOTSG00005032290)	psma6b (ENSOTSG00005032296)	zgc:153383 (ENSOTSG00005032327)	ENSOTSG00005032331	ENSOTSG00005032332	sox11b (ENSOTSG00005032334)	ENSOTSG00005032335 #21	id2b (ENSOTSG00005032336) #22	kidins220b (ENSOTSG00005032347) #23	mboat2b (ENSOTSG00005032377) #24	ASAP2 (ENSOTSG00005032397) #25	ENSOTSG00005037931 #29	ENSOTSG00005037935 ##30	GRHL1 (ENSOTSG00005037941) #32	klf11a (ENSOTSG00005037944) #33	RRM2 (ENSOTSG00005037946) #35	zdhhc14 (ENSOTSG00005039741)	ENSOTSG00005039742	arid1b (ENSOTSG00005039746)	CLDN20 (ENSOTSG00005039956)	ENSOTSG00005039958	cnksr3 (ENSOTSG00005039971)	ENSOTSG00005040269
Coho salmon	MODERN SPECIES	3	ENSOKIG00005016078	rnf8 (ENSOKIG00005016106)	ENSOKIG00005016128	TCTE1 (ENSOKIG00005016150)	tmem151ba (ENSOKIG00005016164)	nfkbie (ENSOKIG00005016172)	slc35b2 (ENSOKIG00005016187)	hsp90ab1 (ENSOKIG00005016242)	nfkbiaa (ENSOKIG00005016989)	psma6b (ENSOKIG00005017010)	zgc:153383 (ENSOKIG00005017044)	ENSOKIG00005017054	sox11b (ENSOKIG00005017067)	ENSOKIG00005017070	ENSOKIG00005017085 #21	id2b (ENSOKIG00005017119) #22	kidins220b (ENSOKIG00005017151) #23	mboat2b (ENSOKIG00005017289) #24	ASAP2 (ENSOKIG00005017506) #25	ENSOKIG00005018207 #29	ENSOKIG00005018230 ##30	GRHL1 (ENSOKIG00005018249) #32	ENSOKIG00005018261	klf11a (ENSOKIG00005001936) #33	RRM2 (ENSOKIG00005002061) #35	ZDHHC14 (ENSOKIG00005002341)	ENSOKIG00005002369	ARID1B (ENSOKIG00005002502)	CLDN20 (ENSOKIG00005002784)	TIAM2 (ENSOKIG00005002825)	ENSOKIG00005002958
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000039893	rnf8 (ENSOMYG00000039904)	TCTE1 (ENSOMYG00000039906)	tmem151ba (ENSOMYG00000039909)	nfkbie (ENSOMYG00000039911)	slc35b2 (ENSOMYG00000051385)	hsp90ab1 (ENSOMYG00000040017)	i kappa B alpha (ENSOMYG00000040385)	ENSOMYG00000040397	ENSOMYG00000040420	ENSOMYG00000040433	sox11b (ENSOMYG00000040451)	ENSOMYG00000063973	ENSOMYG00000040455 #21	ENSOMYG00000054300	id2b (ENSOMYG00000040463) #22	kidins220b (ENSOMYG00000040489) #23	mboat2b (ENSOMYG00000040615) #24	ENSOMYG00000040627	ASAP2 (ENSOMYG00000040908) #25	ENSOMYG00000053723 #29	ENSOMYG00000043141 ##30	ENSOMYG00000069214	ENSOMYG00000064231	GRHL1 (ENSOMYG00000043147) #32	ENSOMYG00000003754	ENSOMYG00000062824	ENSOMYG00000051969	ENSOMYG00000043151 #33	RRM2 (ENSOMYG00000043170) #35	ZDHHC14 (ENSOMYG00000043222)
Salmo	ANCESTRAL SPECIES	26														ENSGT00940000161652.b.b.p.b.a	ENSGT00940000157701.k.a #21	ENSGT00940000156464.mb.a.a #22	ENSGT00940000156714.b.e #23	ENSGT01030000234564.a.a.a.a.b.b.a.b #24	ENSGT01000000220856	ENSGT00940000155734.lb	ENSGT00940000155623.ib.b.b #25	ENSGT00940000155443.d.j #29	ENSGT01090000260040.b.b.b.a.m.a.b.b ##30	ENSGT00940000157612.b.b #32	ENSGT00940000155982.e.b.h #33	ENSGT00390000013305.a.a.c #35	ENSGT00940000156483.h.b.e	ENSGT00390000008642.w.b	ENSGT00940000155634.q.b.d	ENSGT00940000161252.h.k	ENSGT00940000157012.l.d
River trout	MODERN SPECIES	28	DUSP10 (ENSSTUG00000043151)	ENSSTUG00000043141	MIA3 (ENSSTUG00000042837)	ENSSTUG00000042753	rnf8 (ENSSTUG00000042689)	ENSSTUG00000042659	tmem151ba (ENSSTUG00000042634)	TCTE1 (ENSSTUG00000042564)	hsp90ab1 (ENSSTUG00000040989)	nfkbiaa (ENSSTUG00000040946)	psma6b (ENSSTUG00000040766)	zgc:153383 (ENSSTUG00000040709)	ENSSTUG00000040666	sox11b (ENSSTUG00000040648)	ENSSTUG00000040606 #21	id2b (ENSSTUG00000040584) #22	kidins220b (ENSSTUG00000040160) #23	mboat2b (ENSSTUG00000039639) #24	ENSSTUG00000039622	e2f6 (ENSSTUG00000039582)	ASAP2 (ENSSTUG00000035969) #25	ENSSTUG00000035845 #29	ENSSTUG00000035820 ##30	GRHL1 (ENSSTUG00000035797) #32	klf11a (ENSSTUG00000035776) #33	RRM2 (ENSSTUG00000035221) #35	zdhhc14 (ENSSTUG00000035173)	tmem242 (ENSSTUG00000035167)	arid1b (ENSSTUG00000034853)	CLDN20 (ENSSTUG00000034819)	ENSSTUG00000034457
Salmoninae	ANCESTRAL SPECIES	152													ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b #21	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b #22	ENSGT00940000156714.b.f #23	ENSGT01030000234564.a.a.a.a.b.b.a.a #24	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d.i #29	ENSGT01090000260040.b.b.b.a.m.a.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612.b.a #32	ENSGT00940000155982.e.b.g #33	ENSGT00390000013305.a.a.d #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.w.a	ENSGT00390000008642.x
Huchen	MODERN SPECIES	50														ENSHHUG00000023149 #21	ENSHHUG00000023161	id2b (ENSHHUG00000023162) #22	kidins220b (ENSHHUG00000023174) #23	MBOAT2 (ENSHHUG00000023374) #24	e2f6 (ENSHHUG00000023398)	ASAP2 (ENSHHUG00000023420) #25	cpsf3 (ENSHHUG00000023661) #27	ADAM17 (ENSHHUG00000023751) #29	ENSHHUG00000024054 ##30	taf1b (ENSHHUG00000024093) #31	GRHL1 (ENSHHUG00000024127) #32	klf11a (ENSHHUG00000024133) #33	RRM2 (ENSHHUG00000024152) #35	LGALS8 (ENSHHUG00000024294)	zdhhc14 (ENSHHUG00000024302)	tmem242 (ENSHHUG00000024309)	arid1b (ENSHHUG00000024315)
Salmoninae_a	ANCESTRAL SPECIES	23													ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b #21	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b #22	ENSGT00940000156714.b.f #23	ENSGT01030000234564.a.a.a.a.b.b.a.a #24	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d.i #29	ENSGT01090000260040.b.b.b.a.m.a.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612.b.a #32	ENSGT00940000155982.e.b.g #33	ENSGT00390000013305.a.a.d #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c
Oncorhynchus	ANCESTRAL SPECIES	25	ENSGT00940000157671.h	ENSGT00390000011405	ENSGT00940000169554	ENSGT00950000182767.a.h	ENSGT00390000016465	ENSGT00400000022349.d	ENSGT00390000013762.b.a.a.a.b	ENSGT00940000159120.f.d	ENSGT00940000157927.i	ENSGT01020000230401.a.a.a.d	ENSGT00940000163080.a.f	ENSGT00550000074807.d.a.a.a.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b #21	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b #22	ENSGT00940000156714.b.f #23	ENSGT01030000234564.a.a.a.a.b.b.a.a #24	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d.i #29	ENSGT01090000260040.b.b.b.a.m.a.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612.b.a #32	ENSGT00940000155982.e.b.g #33	ENSGT00390000013305.a.a.d #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c
Rainbow trout	MODERN SPECIES	25	taf1a (ENSOMYG00000053018)	taf1a (ENSOMYG00000049635)	taf1a (ENSOMYG00000064838)	AIDA (ENSOMYG00000002016)	tmem151ba (ENSOMYG00000002067)	nfkbie (ENSOMYG00000002086)	slc35b2 (ENSOMYG00000002103)	hsp90bb (ENSOMYG00000002804)	ENSOMYG00000003396	ENSOMYG00000003459	sox11b (ENSOMYG00000003505)	ENSOMYG00000057208	ENSOMYG00000067987	ENSOMYG00000064901 #21	ENSOMYG00000003530	id2b (ENSOMYG00000003555) #22	kidins220b (ENSOMYG00000003863) #23	mboat2b (ENSOMYG00000003933) #24	e2f6 (ENSOMYG00000003946)	ASAP2 (ENSOMYG00000004895) #25	ENSOMYG00000053980	cpsf3 (ENSOMYG00000005764) #27	ADAM17 (ENSOMYG00000007729) #29	ywhaqa (ENSOMYG00000009438) ##30	ENSOMYG00000072499	ENSOMYG00000046721	taf1b (ENSOMYG00000077298) #31	GRHL1 (ENSOMYG00000009524) #32	klf11a (ENSOMYG00000009549) #33	RRM2 (ENSOMYG00000009693) #35	ENSOMYG00000010358
Oncorhynchus_a	ANCESTRAL SPECIES	17	ENSGT00390000017237.d	ENSGT00950000183093.C.e	ENSGT00940000157671.h	ENSGT00390000011405	ENSGT00950000182767.a.h	ENSGT00390000016465	ENSGT00400000022349.d	ENSGT00390000013762.b.a.a.a.b	ENSGT00940000159120.f.d	ENSGT00940000157927.i	ENSGT01020000230401.a.a.a.d	ENSGT00940000163080.a.f	ENSGT00550000074807.d.a.a.a.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b #22	ENSGT00940000156714.b.f #23	ENSGT01030000234564.a.a.a.a.b.b.a.a #24	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d.i #29	ENSGT01090000260040.b.b.b.a.m.a.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612.b.a #32	ENSGT00940000155982.e.b.g #33	ENSGT00390000013305.a.a.d #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c
Coho salmon	MODERN SPECIES	13	kcnk3a (ENSOKIG00005030865)	slc35f6 (ENSOKIG00005030900)	hlx1 (ENSOKIG00005030917)	DUSP10 (ENSOKIG00005030931)	taf1a (ENSOKIG00005030941)	ENSOKIG00005030955	aida (ENSOKIG00005030994)	rnf8 (ENSOKIG00005031006)	tmem151ba (ENSOKIG00005031075)	nfkbie (ENSOKIG00005031083)	slc35b2 (ENSOKIG00005031109)	hsp90ab1 (ENSOKIG00005031181)	ENSOKIG00005032343	PSMA6 (ENSOKIG00005032399)	sox11b (ENSOKIG00005032433)	id2b (ENSOKIG00005032439) #22	kidins220b (ENSOKIG00005032461) #23	mboat2b (ENSOKIG00005032655) #24	e2f6 (ENSOKIG00005032718)	ASAP2 (ENSOKIG00005032844) #25	cpsf3 (ENSOKIG00005034078) #27	ADAM17 (ENSOKIG00005034365) #29	ENSOKIG00005036784 ##30	taf1b (ENSOKIG00005036800) #31	klf11a (ENSOKIG00005036821) #33	RRM2 (ENSOKIG00005036867) #35	LGALS8 (ENSOKIG00005037486)	zdhhc14 (ENSOKIG00005037548)	tmem242 (ENSOKIG00005037575)	arid1b (ENSOKIG00005037606)	CLDN20 (ENSOKIG00005037936)
Chinook salmon	MODERN SPECIES	9	hlx1 (ENSOTSG00005044410)	DUSP10 (ENSOTSG00005044411)	taf1a (ENSOTSG00005044412)	ENSOTSG00005044413	aida (ENSOTSG00005044414)	rnf8 (ENSOTSG00005002084)	tmem151ba (ENSOTSG00005002279)	nfkbie (ENSOTSG00005002283)	slc35b2 (ENSOTSG00005002289)	hsp90ab1 (ENSOTSG00005002318)	nfkbiaa (ENSOTSG00005003896)	psma6b (ENSOTSG00005003898)	sox11b (ENSOTSG00005003905)	ENSOTSG00005003907	ENSOTSG00005003908	id2b (ENSOTSG00005003909) #22	kidins220b (ENSOTSG00005003919) #23	mboat2b (ENSOTSG00005003933) #24	e2f6 (ENSOTSG00005003935)	ASAP2 (ENSOTSG00005003996) #25	cpsf3 (ENSOTSG00005011109) #27	ADAM17 (ENSOTSG00005012037) #29	ENSOTSG00005015416 ##30	taf1b (ENSOTSG00005015417) #31	GRHL1 (ENSOTSG00005015418) #32	ENSOTSG00005015419	klf11a (ENSOTSG00005015420) #33	RRM2 (ENSOTSG00005015421) #35	LGALS8 (ENSOTSG00005016467)	zdhhc14 (ENSOTSG00005016470)	tmem242 (ENSOTSG00005016471)
Salmo	ANCESTRAL SPECIES	12	ENSGT00940000154746.a.b	ENSGT00950000182772.A.a.b.`b.b.h	ENSGT00940000154862.x.a.b.a.b	ENSGT00390000016478.e.a	ENSGT00940000164834.b.f	ENSGT01030000234517.H.a.f	ENSGT00530000063867.a.a.db	ENSGT00530000063867.a.b.m.b	ENSGT00950000183136.a.b.f	ENSGT00940000155144.n.t	ENSGT00940000156671.l.b.a	ENSGT00940000155490.a.c.a.c.b	ENSGT00940000154045.b.d.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b #21	ENSGT00940000156464.mb.a.b #22	ENSGT00940000156714.b.f #23	ENSGT01030000234564.a.a.a.a.b.b.a.a #24	ENSGT00940000155734.kb	ENSGT00940000155623.ib.b.a #25	ENSGT00940000155699.a.a #27	ENSGT00940000155443.d.i #29	ENSGT01090000260040.b.b.b.a.m.a.b.a ##30	ENSGT00440000033827 #31	ENSGT00940000157612.b.a #32	ENSGT00940000155982.e.b.g #33	ENSGT00390000013305.a.a.d #35	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.w.a	ENSGT00940000155634.q.b.c
River trout	MODERN SPECIES		ckbb (ENSSTUG00000039323)	mark3b (ENSSTUG00000038826)	eif5 (ENSSTUG00000038697)	si:dkeyp-72h1.1 (ENSSTUG00000038664)	cdc42bpb (ENSSTUG00000037407)	si:dkey-177p2.6 (ENSSTUG00000037358)	cdca4 (ENSSTUG00000037357)	ENSSTUG00000037355	ahsa1a (ENSSTUG00000037323)	sel1l (ENSSTUG00000034678)	ENSSTUG00000034582	nudt14 (ENSSTUG00000034575)	sox11b (ENSSTUG00000034561)	ENSSTUG00000034552 #21	ENSSTUG00000034533	id2b (ENSSTUG00000034522) #22	kidins220b (ENSSTUG00000034149) #23	mboat2b (ENSSTUG00000034052) #24	e2f6 (ENSSTUG00000034020)	ASAP2 (ENSSTUG00000031636) #25	cpsf3 (ENSSTUG00000031295) #27	ADAM17 (ENSSTUG00000028571) #29	ENSSTUG00000028499 ##30	taf1b (ENSSTUG00000028460) #31	klf11a (ENSSTUG00000028441) #33	RRM2 (ENSSTUG00000027410) #35	LGALS8 (ENSSTUG00000027376)	zdhhc14 (ENSSTUG00000027365)	tmem242 (ENSSTUG00000027359)	arid1b (ENSSTUG00000027017)	CLDN20 (ENSSTUG00000026989)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	234	ENSGT00950000183034.C.a.b.f.b	ENSGT00390000012242.a.a	ENSGT00390000012242.b.b	ENSGT01010000222287.B.b.a.a.b.b	ENSGT00940000153511.b.q.c	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b.b	ENSGT00530000063503.a.b.g.b.d	ENSGT00940000156078.c.f	ENSGT00940000155724.q	ENSGT00940000159468.h	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.h.b.a #20	ENSGT00940000157701.l.b.a.b #21	ENSGT00940000156464.mb.b.a #22	ENSGT00940000156714.a.c #23	ENSGT01030000234564.a.a.a.a.b.a.b #24	ENSGT00940000155623.ib.a.a #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c.c #29	ENSGT01090000260040.b.b.b.a.m.a.a.c ##30	ENSGT00940000157612.a.a #32	ENSGT00940000155982.e.a.d #33	ENSGT00940000157136.a.c	ENSGT00950000183149.C.a.c	ENSGT00940000155500.e.d	ENSGT00940000154928.c.a.a.c	ENSGT00390000010056.a	ENSGT00390000017953.B.d
Huchen	MODERN SPECIES	831													rsad2 (ENSHHUG00000039097) #20	RNF144A (ENSHHUG00000039176) #21	ENSHHUG00000039204	id2a (ENSHHUG00000039210) #22	KIDINS220 (ENSHHUG00000039259) #23	MBOAT2 (ENSHHUG00000039955) #24
Salmoninae_a	ANCESTRAL SPECIES	36	ENSGT00390000012242.b.b	ENSGT01010000222287.B.b.a.a.b.b.b	ENSGT00940000153511.b.q.c	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b.b	ENSGT00530000063503.a.b.g.b.d	ENSGT00940000156078.c.f	ENSGT00940000155724.q	ENSGT00940000159468.h	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.h.b.a #20	ENSGT00390000013670.h.a #20	ENSGT00940000157701.l.a #21	ENSGT00940000157701.l.b.a.b #21	ENSGT00940000156464.mb.b.a #22	ENSGT00940000156714.a.c #23	ENSGT01030000234564.a.a.a.a.b.a.b #24	ENSGT00940000155623.ib.a.a #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c.c #29	ENSGT01090000260040.b.b.b.a.m.a.a.c ##30	ENSGT00940000157612.a.a #32	ENSGT00940000155982.e.a.d #33	ENSGT00940000157136.a.c	ENSGT00950000183149.C.a.c	ENSGT00940000155500.e.d	ENSGT00940000154928.c.a.a.c	ENSGT00390000010056.a	ENSGT00390000017953.B.d
Oncorhynchus	ANCESTRAL SPECIES	36	ENSGT00990000212836	ENSGT00390000012242.b.b	ENSGT01010000222287.B.b.a.a.b.b.b	ENSGT00940000153511.b.q.c	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b.b	ENSGT00530000063503.a.b.g.b.d	ENSGT00940000156078.c.f	ENSGT00940000155724.q	ENSGT00940000159468.h	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.h.b.a #20	ENSGT00390000013670.h.a #20	ENSGT00940000157701.l.b.a.b #21	ENSGT00940000156464.mb.b.a #22	ENSGT00940000156714.a.c #23	ENSGT01030000234564.a.a.a.a.b.a.b #24	ENSGT00940000155623.ib.a.a #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c.c #29	ENSGT01090000260040.b.b.b.a.m.a.a.c ##30	ENSGT00940000157612.a.a #32	ENSGT00940000155982.e.a.d #33	ENSGT00940000159405.c	ENSGT00940000157136.a.c	ENSGT00950000183149.C.a.c	ENSGT00940000155500.e.d	ENSGT00940000154928.c.a.a.c	ENSGT00390000010056.a
Oncorhynchus_a	ANCESTRAL SPECIES	33	ENSGT00990000212836	ENSGT00390000012242.b.b	ENSGT01010000222287.B.b.a.a.b.b.b	ENSGT00940000153511.b.q.c	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b.b	ENSGT00530000063503.a.b.g.b.d	ENSGT00940000156078.c.f	ENSGT00940000155724.q	ENSGT00940000159468.h	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.h.b.a #20	ENSGT00390000013670.h.a #20	ENSGT00940000157701.l.b.a.b #21	ENSGT00940000156464.mb.b.a #22	ENSGT00940000156714.a.c #23	ENSGT01030000234564.a.a.a.a.b.a.b #24	ENSGT00940000155623.ib.a.a #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c.c #29	ENSGT01090000260040.b.b.b.a.m.a.a.c ##30	ENSGT00940000157612.a.a #32	ENSGT00940000155982.e.a.d #33	ENSGT00940000157136.a.c	ENSGT00950000183149.C.a.c	ENSGT00940000155500.e.d	ENSGT00940000154928.c.a.a.c	ENSGT00390000010056.a	ENSGT00390000017953.B.d
Chinook salmon	MODERN SPECIES	32	ENSOTSG00005022631	HTR1E (ENSOTSG00005022632)	syncripl (ENSOTSG00005022633)	SNX14 (ENSOTSG00005022646)	HTR1B (ENSOTSG00005022775)	ENSOTSG00005022776	myo6b (ENSOTSG00005022780)	ENSOTSG00005022908	colec11 (ENSOTSG00005022909)	ENSOTSG00005022910	sox11a (ENSOTSG00005022911)	CMPK2 (ENSOTSG00005022913) #19	rsad2 (ENSOTSG00005022914) #20	rsad2 (ENSOTSG00005022915) #20	rnf144aa (ENSOTSG00005022916) #21	id2a (ENSOTSG00005022922) #22	KIDINS220 (ENSOTSG00005022924) #23	MBOAT2 (ENSOTSG00005023056) #24	asap2a (ENSOTSG00005023061) #25	itgb1bp1 (ENSOTSG00005023578) #26	iah1 (ENSOTSG00005023586) #28	adam17a (ENSOTSG00005023608) #29	ywhaqb (ENSOTSG00005024325) ##30	grhl1 (ENSOTSG00005024345) #32	klf11b (ENSOTSG00005025136) #33	znf395a (ENSOTSG00005025139)	ENSOTSG00005025142	KIF13B (ENSOTSG00005025169)	ENSOTSG00005027420	hmbox1a (ENSOTSG00005027422)	ENSOTSG00005027426
Coho salmon	MODERN SPECIES	5	CGA (ENSOKIG00005008528)	CGA (ENSOKIG00005008502)	HTR1E (ENSOKIG00005008494)	SYNCRIP (ENSOKIG00005008379)	SNX14 (ENSOKIG00005005997)	HTR1B (ENSOKIG00005005804)	ENSOKIG00005005792	MYO6 (ENSOKIG00005005665)	ENSOKIG00005005633	COLEC11 (ENSOKIG00005005626)	sox11a (ENSOKIG00005005621)	CMPK2 (ENSOKIG00005005614) #19	rsad2 (ENSOKIG00005005585) #20	rsad2 (ENSOKIG00005005503) #20	rnf144aa (ENSOKIG00005005477) #21	id2a (ENSOKIG00005005464) #22	KIDINS220 (ENSOKIG00005005405) #23	MBOAT2 (ENSOKIG00005004613) #24	asap2a (ENSOKIG00005004401) #25	itgb1bp1 (ENSOKIG00005049877) #26	iah1 (ENSOKIG00005049874) #28	adam17a (ENSOKIG00005049208) #29	ywhaqb (ENSOKIG00005049092) ##30	GRHL1 (ENSOKIG00005049051) #32	ENSOKIG00005049033	znf395a (ENSOKIG00005049026)	ENSOKIG00005049022	KIF13B (ENSOKIG00005048648)	hmbox1a (ENSOKIG00005048605)	ENSOKIG00005048596	ENSOKIG00005048592
Rainbow trout	MODERN SPECIES	17	HTR1E (ENSOMYG00000022881)	ENSOMYG00000022962	SNX14 (ENSOMYG00000023296)	HTR1B (ENSOMYG00000023837)	ENSOMYG00000023849	MYO6 (ENSOMYG00000023956)	ENSOMYG00000024095	colec11 (ENSOMYG00000024107)	sox11a (ENSOMYG00000024126)	CMPK2 (ENSOMYG00000024141) #19	rsad2 (ENSOMYG00000024217) #20	vig1 (ENSOMYG00000024630) #20	rnf144aa (ENSOMYG00000024671) #21	ENSOMYG00000060253	ENSOMYG00000056773	id2a (ENSOMYG00000024697) #22	KIDINS220 (ENSOMYG00000024757) #23	ENSOMYG00000061104	MBOAT2 (ENSOMYG00000024831) #24	asap2a (ENSOMYG00000025517) #25	ENSOMYG00000039364	itgb1bp1 (ENSOMYG00000028983) #26	iah1 (ENSOMYG00000029015) #28	adam17a (ENSOMYG00000029732) #29	ENSOMYG00000030603 ##30	ENSOMYG00000057253	ENSOMYG00000030683 #32	ENSOMYG00000030928	znf395a (ENSOMYG00000030940)	ENSOMYG00000066884	ENSOMYG00000031233
Salmo	ANCESTRAL SPECIES	11	ENSGT00940000156096.e.a.c	ENSGT00390000011376.d	ENSGT00950000183034.C.a.b.f.a.b	ENSGT01010000222287.B.b.a.a.b.b.b	ENSGT00940000153511.b.q.c	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b.b	ENSGT00530000063503.a.b.g.b.d	ENSGT00940000156078.c.f	ENSGT00940000155724.q	ENSGT00940000159468.h	ENSGT00940000161652.b.b.o.b	ENSGT00940000154030.a.b #19	ENSGT00390000013670.h.a #20	ENSGT00940000157701.l.a #21	ENSGT00940000156464.mb.b.a #22	ENSGT00940000156714.a.c #23	ENSGT01030000234564.a.a.a.a.b.a.b #24	ENSGT00940000155623.ib.a.a #25	ENSGT00390000003990 #26	ENSGT00390000008069 #28	ENSGT00940000155443.c.c #29	ENSGT01090000260040.b.b.b.a.m.a.a.c ##30	ENSGT00940000157612.a.a #32	ENSGT00940000159405.c	ENSGT00940000157136.a.c	ENSGT00950000183149.C.a.c	ENSGT00940000155500.e.d	ENSGT00940000154928.c.a.a.c	ENSGT00390000010056.a	ENSGT00390000017953.B.d
River trout	MODERN SPECIES	17	znf292a (ENSSTUG00000033295)	CGA (ENSSTUG00000033285)	ENSSTUG00000033278	ENSSTUG00000033269	syncripl (ENSSTUG00000033173)	SNX14 (ENSSTUG00000032907)	HTR1B (ENSSTUG00000032879)	ENSSTUG00000032863	myo6b (ENSSTUG00000032699)	ENSSTUG00000032683	colec11 (ENSSTUG00000032668)	sox11a (ENSSTUG00000032660)	CMPK2 (ENSSTUG00000032649) #19	rsad2 (ENSSTUG00000032593) #20	rnf144aa (ENSSTUG00000032541) #21	id2a (ENSSTUG00000032529) #22	KIDINS220 (ENSSTUG00000032081) #23	MBOAT2 (ENSSTUG00000031347) #24	asap2a (ENSSTUG00000029463) #25	itgb1bp1 (ENSSTUG00000029391) #26	iah1 (ENSSTUG00000029379) #28	adam17a (ENSSTUG00000025308) #29	ENSSTUG00000025080 ##30	grhl1 (ENSSTUG00000024466) #32	ENSSTUG00000024428	znf395a (ENSSTUG00000024417)	ENSSTUG00000024409	KIF13B (ENSSTUG00000020959)	hmbox1a (ENSSTUG00000020701)	ENSSTUG00000020671	ENSSTUG00000020638
Salmoninae	ANCESTRAL SPECIES	1076															ENSGT00940000157701.l.b.a.a #21	ENSGT00940000156464.mb.b.b #22	ENSGT00940000156714.a.d #23	ENSGT01030000234564.a.a.a.a.b.a.a #24	ENSGT00940000155623.ib.a.b #25
Salmoninae_a	ANCESTRAL SPECIES	8	ENSGT00390000011376.c	ENSGT00950000183034.C.a.b.e	ENSGT00390000012242.a.b	ENSGT01010000222287.B.b.a.a.b.b.a	ENSGT00940000153511.b.q.d	ENSGT00530000063775.a.a.a	ENSGT01010000222287.B.b.a.b.b.b.a	ENSGT00530000063503.a.b.g.b.c	ENSGT00940000156078.c.e	ENSGT00940000159468.g	ENSGT00940000164359.b	ENSGT00940000161652.b.b.p.a.a	ENSGT00390000013670.g #20	ENSGT00940000157701.l.b.b #21	ENSGT00940000157701.l.b.a.a #21	ENSGT00940000156464.mb.b.b #22	ENSGT00940000156714.a.d #23	ENSGT01030000234564.a.a.a.a.b.a.a #24	ENSGT00940000155623.ib.a.b #25	ENSGT00940000155443.c.d #29	ENSGT01090000260040.b.b.b.a.m.a.a.d ##30	ENSGT00940000162556.G.d.g.a.a	ENSGT01090000260226.d.b	ENSGT01030000235230	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799.cc.a	ENSGT00390000018900.q	ENSGT00940000157219.f.d	ENSGT00390000008041.A.d	ENSGT00940000153433.B.a.b.h	ENSGT00940000158456
Oncorhynchus	ANCESTRAL SPECIES	6	ENSGT00940000156096.e.a.d	ENSGT00390000011376.c	ENSGT00950000183034.C.a.b.e	ENSGT00390000012242.a.b	ENSGT01010000222287.B.b.a.a.b.b.a	ENSGT00940000153511.b.q.d	ENSGT00530000063775.a.a.a	ENSGT01010000222287.B.b.a.b.b.b.a	ENSGT00530000063503.a.b.g.b.c	ENSGT00940000156078.c.e	ENSGT00940000159468.g	ENSGT00940000164359.b	ENSGT00940000161652.b.b.p.a.a	ENSGT00390000013670.g #20	ENSGT00940000157701.l.b.a.a #21	ENSGT00940000156464.mb.b.b #22	ENSGT00940000156714.a.d #23	ENSGT01030000234564.a.a.a.a.b.a.a #24	ENSGT00940000155623.ib.a.b #25	ENSGT00940000155443.c.d #29	ENSGT01090000260040.b.b.b.a.m.a.a.d ##30	ENSGT00940000162556.G.d.g.a.a	ENSGT01090000260226.c	ENSGT00940000157612.a.b #32	ENSGT00940000155982.e.a.c #33	ENSGT00940000157136.a.d	ENSGT00950000183149.C.a.d	ENSGT00940000155500.e.c	ENSGT00940000154928.c.a.a.d	ENSGT00390000017953.B.c	ENSGT00940000156546.`b.b
Oncorhynchus_a	ANCESTRAL SPECIES	10	ENSGT00940000156096.e.a.d	ENSGT00390000011376.c	ENSGT00950000183034.C.a.b.e	ENSGT00390000012242.a.b	ENSGT01010000222287.B.b.a.a.b.b.a	ENSGT00940000153511.b.q.d	ENSGT00530000063775.a.a.a	ENSGT01010000222287.B.b.a.b.b.b.a	ENSGT00530000063503.a.b.g.b.c	ENSGT00940000156078.c.e	ENSGT00940000159468.g	ENSGT00940000164359.b	ENSGT00940000161652.b.b.p.a.a	ENSGT00390000013670.g #20	ENSGT00940000157701.l.b.a.a #21	ENSGT00940000156464.mb.b.b #22	ENSGT00940000156714.a.d #23	ENSGT01100000264750	ENSGT01030000234564.a.a.a.a.b.a.a #24	ENSGT00940000155623.ib.a.b #25	ENSGT00940000155443.c.d #29	ENSGT01090000260040.b.b.b.a.m.a.a.d ##30	ENSGT00940000162556.G.d.g.a.a	ENSGT01090000260226.c	ENSGT00940000157612.a.b #32	ENSGT00940000155982.e.a.c #33	ENSGT00940000157136.a.d	ENSGT00950000183149.C.a.d	ENSGT00940000155500.e.c	ENSGT00940000154928.c.a.a.d	ENSGT00390000017953.B.c
Coho salmon	MODERN SPECIES	27	AKIRIN2 (ENSOKIG00005002446)	ENSOKIG00005002323	CGA (ENSOKIG00005002246)	ENSOKIG00005002211	syncripl (ENSOKIG00005002093)	NT5E (ENSOKIG00005001821)	HTR1B (ENSOKIG00005001759)	ENSOKIG00005001747	MYO6 (ENSOKIG00005029234)	colec11 (ENSOKIG00005029007)	ENSOKIG00005028959	ENSOKIG00005028945	ENSOKIG00005028936	RSAD2 (ENSOKIG00005028917) #20	RNF144A (ENSOKIG00005028893) #21	id2a (ENSOKIG00005028876) #22	ENSOKIG00005028871	KIDINS220 (ENSOKIG00005026749) #23	ENSOKIG00005026591	MBOAT2 (ENSOKIG00005026470) #24	ENSOKIG00005026449	asap2a (ENSOKIG00005025976) #25	ADAM17 (ENSOKIG00005023340) #29	ywhaqb (ENSOKIG00005023149) ##30	ENSOKIG00005023141	ENSOKIG00005023102	grhl1 (ENSOKIG00005023069) #32	klf11b (ENSOKIG00005023054) #33	znf395a (ENSOKIG00005023042)	ENSOKIG00005023034	KIF13B (ENSOKIG00005016100)
Chinook salmon	MODERN SPECIES	2	CNR1 (ENSOTSG00005035060)	akirin2 (ENSOTSG00005035058)	orc3 (ENSOTSG00005034740)	CGA (ENSOTSG00005034727)	HTR1E (ENSOTSG00005034726)	syncripl (ENSOTSG00005034680)	nt5e (ENSOTSG00005034677)	HTR1B (ENSOTSG00005034675)	ENSOTSG00005034674	MYO6 (ENSOTSG00005025552)	colec11 (ENSOTSG00005025527)	ENSOTSG00005025525	sox11a (ENSOTSG00005025523)	rsad2 (ENSOTSG00005025521) #20	rnf144aa (ENSOTSG00005025518) #21	id2a (ENSOTSG00005025516) #22	KIDINS220 (ENSOTSG00005020089) #23	ENSOTSG00005020010	MBOAT2 (ENSOTSG00005017577) #24	asap2a (ENSOTSG00005017234) #25	ADAM17 (ENSOTSG00005013854) #29	ywhaqb (ENSOTSG00005013852) ##30	ENSOTSG00005013848	ENSOTSG00005013846	grhl1 (ENSOTSG00005013839) #32	klf11b (ENSOTSG00005013836) #33	znf395a (ENSOTSG00005013834)	ENSOTSG00005013832	ENSOTSG00005013831	ENSOTSG00005013830	slc35e3 (ENSOTSG00005013829)
Rainbow trout	MODERN SPECIES	10	ENSOMYG00000006075	ENSOMYG00000005820	ENSOMYG00000064246	ENSOMYG00000034048	ENSOMYG00000034004	HTR1B (ENSOMYG00000033979)	ENSOMYG00000070379	MYO6 (ENSOMYG00000032933)	colec11 (ENSOMYG00000067691)	ENSOMYG00000032610	sox11a (ENSOMYG00000032561)	ENSOMYG00000030521	ENSOMYG00000032558	rsad2 (ENSOMYG00000032554) #20	rnf144aa (ENSOMYG00000032544) #21	id2 (ENSOMYG00000032530) #22	ENSOMYG00000065196	KIDINS220 (ENSOMYG00000029576) #23	ENSOMYG00000076932	MBOAT2 (ENSOMYG00000027631) #24	ENSOMYG00000053686	asap2a (ENSOMYG00000026896) #25	ENSOMYG00000023286 #29	ywhaqb (ENSOMYG00000075163) ##30	ENSOMYG00000022631	ENSOMYG00000022623	grhl1 (ENSOMYG00000022596) #32	ENSOMYG00000022560 #33	znf395a (ENSOMYG00000022552)	ENSOMYG00000022544	ENSOMYG00000058203
Salmo	ANCESTRAL SPECIES	8	ENSGT00390000011376.c	ENSGT00950000183034.C.a.b.e	ENSGT00390000012242.a.b	ENSGT00940000165278.e	ENSGT00940000153511.b.q.d	ENSGT00530000063775.a.a.a	ENSGT01010000222287.B.b.a.b.b.b.a	ENSGT00530000063503.a.b.g.b.c	ENSGT00940000156078.c.e	ENSGT00940000159468.g	ENSGT00940000164359.b	ENSGT00940000161652.b.b.o.a	ENSGT00940000161652.b.b.p.a.a	ENSGT00390000013670.g #20	ENSGT00940000157701.l.b.b #21	ENSGT00940000156464.mb.b.b #22	ENSGT00940000156714.a.d #23	ENSGT01030000234564.a.a.a.a.b.a.a #24	ENSGT00940000155623.ib.a.b #25	ENSGT00940000155443.c.d #29	ENSGT01090000260040.b.b.b.a.m.a.a.d ##30	ENSGT00940000162556.G.d.g.a.a	ENSGT01090000260226.d.b	ENSGT00940000162556.G.d.g.a.b.a	ENSGT00940000157612.a.b #32	ENSGT00940000155982.e.a.c #33	ENSGT00940000157136.a.d	ENSGT00950000183149.C.a.d	ENSGT00940000155500.e.c	ENSGT00940000154928.c.a.a.d	ENSGT00390000017953.B.c
River trout	MODERN SPECIES	26	orc3 (ENSSTUG00000051046)	znf292a (ENSSTUG00000051039)	ENSSTUG00000051036	CGA (ENSSTUG00000051032)	ENSSTUG00000051031	syncripl (ENSSTUG00000051028)	nt5e (ENSSTUG00000051027)	HTR1B (ENSSTUG00000051026)	MYO6 (ENSSTUG00000050868)	colec11 (ENSSTUG00000050845)	ENSSTUG00000050843	sox11a (ENSSTUG00000050842)	rsad2 (ENSSTUG00000050838) #20	rnf144aa (ENSSTUG00000050835) #21	ENSSTUG00000050833	id2a (ENSSTUG00000050831) #22	KIDINS220 (ENSSTUG00000050628) #23	MBOAT2 (ENSSTUG00000050617) #24	asap2a (ENSSTUG00000050299) #25	ADAM17 (ENSSTUG00000049899) #29	ywhaqb (ENSSTUG00000049851) ##30	ENSSTUG00000049843	ENSSTUG00000049839	ENSSTUG00000049834	grhl1 (ENSSTUG00000049825) #32	klf11b (ENSSTUG00000049822) #33	znf395a (ENSSTUG00000049819)	ENSSTUG00000049817	ENSSTUG00000049816	KIF13B (ENSSTUG00000048950)	hmbox1a (ENSSTUG00000048864)
Huchen	MODERN SPECIES	1088													ENSHHUG00000029453	dusp6 (ENSHHUG00000029447)	ENSHHUG00000029446	id2a (ENSHHUG00000029385) #22	KIDINS220 (ENSHHUG00000027771) #23	MBOAT2 (ENSHHUG00000027741) #24	ENSHHUG00000027735
Elephant shark	MODERN SPECIES	1649													CMPK2 (ENSCMIG00000008524) #19	rsad2 (ENSCMIG00000008527) #20	rnf144aa (ENSCMIG00000008529) #21	id2a (ENSCMIG00000008530) #22	kidins220b (ENSCMIG00000008555) #23	mboat2b (ENSCMIG00000008612) #24	ENSCMIG00000008631	ENSCMIG00000008632	asap2a (ENSCMIG00000008687) #25	itgb1bp1 (ENSCMIG00000009018) #26	cpsf3 (ENSCMIG00000009078) #27	iah1 (ENSCMIG00000009265) #28	adam17a (ENSCMIG00000009330) #29	ywhaqa (ENSCMIG00000009566) ##30	ENSCMIG00000009569 #31	ENSCMIG00000009575 #32	klf11 (ENSCMIG00000009585) #33