Gnathostomata	ANCESTRAL SPECIES	162							ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155734	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29
Euteleostomi	ANCESTRAL SPECIES	10	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155734	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Sarcopterygii	ANCESTRAL SPECIES	10	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37	ENSGT01030000234517.D
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Amniota	ANCESTRAL SPECIES	1	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Mammalia	ANCESTRAL SPECIES	38	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Theria	ANCESTRAL SPECIES	35	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Glires	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Rodentia	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Hystricomorpha	ANCESTRAL SPECIES	64														ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a.u.a #30	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hystricomorpha_a	ANCESTRAL SPECIES	70	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652	ENSGT00940000162396	ENSGT00390000001793	ENSGT00940000159468	ENSGT00390000014122.i.b.a.b	ENSGT00390000003466	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671 #16	ENSGT00940000157666 #18	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Hystricomorpha_b	ANCESTRAL SPECIES	91	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652	ENSGT00940000162396	ENSGT00390000001793	ENSGT00940000159468	ENSGT00390000014122.i.b.a.b	ENSGT00390000003466	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671 #16	ENSGT00940000157666 #18	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a.v ##30	ENSGT00390000013305.a.a.u.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Degu	MODERN SPECIES	192										MYT1L (ENSODEG00000001544) #16	ENSODEG00000018668 #17	PXDN (ENSODEG00000001228) #18	ASAP2 (ENSODEG00000001497) #19	ENSODEG00000018909 #20	ENSODEG00000003101 #21	CPSF3 (ENSODEG00000003129) #22	IAH1 (ENSODEG00000003362) #23	ADAM17 (ENSODEG00000003472) #24	YWHAQ (ENSODEG00000001504) #25	ENSODEG00000001535 #26	TAF1B (ENSODEG00000002052) #27	GRHL1 (ENSODEG00000002151) #28	ENSODEG00000002288 #29	RRM2 (ENSODEG00000002317) #30	ENSODEG00000002415 #31	ODC1 (ENSODEG00000000437) #32	NOL10 (ENSODEG00000000508) #33	ATP6V1C2 (ENSODEG00000000754) #34	ENSODEG00000000842 #35	ENSODEG00000000975 #36	ENSODEG00000000987 #37
Long-tailed chinchilla	MODERN SPECIES	194	CMPK2 (ENSCLAG00000002165)	SOX11 (ENSCLAG00000002180)	DCDC2C (ENSCLAG00000002204)	ALLC (ENSCLAG00000002247)	COLEC11 (ENSCLAG00000002289)	RPS7 (ENSCLAG00000002424)	RNASEH1 (ENSCLAG00000002440)	ADI1 (ENSCLAG00000002464)	TRAPPC12 (ENSCLAG00000002486)	EIPR1 (ENSCLAG00000002535)	ENSCLAG00000001592	MYT1L (ENSCLAG00000001644) #16	PXDN (ENSCLAG00000001727) #18	ASAP2 (ENSCLAG00000001989) #19	ITGB1BP1 (ENSCLAG00000002388) #21	CPSF3 (ENSCLAG00000002727) #22	IAH1 (ENSCLAG00000002879) #23	ADAM17 (ENSCLAG00000003055) #24	YWHAQ (ENSCLAG00000003576) ##25	TAF1B (ENSCLAG00000003776) #27	GRHL1 (ENSCLAG00000004000) #28	ENSCLAG00000004146 #29	RRM2 (ENSCLAG00000001926) ##30	ENSCLAG00000002025	HPCAL1 (ENSCLAG00000002037) #31	ODC1 (ENSCLAG00000002140) #32	NOL10 (ENSCLAG00000002234) #33	ATP6V1C2 (ENSCLAG00000006612) #34	PDIA6 (ENSCLAG00000006956) #35	KCNF1 (ENSCLAG00000017968)	ENSCLAG00000007661 #36
Guinea pig	MODERN SPECIES	75	RSAD2 (ENSCPOG00000008107)	CMPK2 (ENSCPOG00000001105)	SOX11 (ENSCPOG00000019507)	ENSCPOG00000022309	ALLC (ENSCPOG00000014255)	COLEC11 (ENSCPOG00000032858)	RPS7 (ENSCPOG00000009795)	RNASEH1 (ENSCPOG00000022278)	ADI1 (ENSCPOG00000027219)	TRAPPC12 (ENSCPOG00000005749)	EIPR1 (ENSCPOG00000005737)	MYT1L (ENSCPOG00000013246) #16	PXDN (ENSCPOG00000011199) #18	ASAP2 (ENSCPOG00000010278) #19	ITGB1BP1 (ENSCPOG00000010293) #21	CPSF3 (ENSCPOG00000011299) #22	IAH1 (ENSCPOG00000011308) #23	ADAM17 (ENSCPOG00000011313) #24	YWHAQ (ENSCPOG00000011321) #25	ENSCPOG00000012839	MYCN (ENSCPOG00000020263)
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000041769	ENSHGLG00000035478	ENSHGLG00000032201	ENSHGLG00000043794	ENSHGLG00000040330	ENSHGLG00000040838	ENSHGLG00000036700	ENSHGLG00000032848	ENSHGLG00000042745	ENSHGLG00000049015	ENSHGLG00000044591	ENSHGLG00000033649	ENSHGLG00000040434	ENSHGLG00000000974 #19	ITGB1BP1 (ENSHGLG00000000877) #21	CPSF3 (ENSHGLG00000000666) #22	ENSHGLG00000000512 #23	ADAM17 (ENSHGLG00000000502) #24	ENSHGLG00000000473 #25	ENSHGLG00000000328	ENSHGLG00000049295	ENSHGLG00000049886	NBAS (ENSHGLG00000000885)	ENSHGLG00000047840	LRATD1 (ENSHGLG00000004468)	ENSHGLG00000005931	ENSHGLG00000001922	TRIB2 (ENSHGLG00000050246)	LPIN1 (ENSHGLG00000000436)	NTSR2 (ENSHGLG00000048775)	ENSHGLG00000000910
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.b #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v.b ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Marmotini	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069.k.a #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.b #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v.b ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069.k.a #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.b #29	ENSGT00390000013305.a.a.v.b ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Arctic ground squirrel	MODERN SPECIES								SOX11 (ENSUPAG00010012315)	CMPK2 (ENSUPAG00010012310)	RSAD2 (ENSUPAG00010012305)	RNF144A (ENSUPAG00010012263)	ID2 (ENSUPAG00010012253)	KIDINS220 (ENSUPAG00010012028)	MBOAT2 (ENSUPAG00010011957)	ASAP2 (ENSUPAG00010011650) #19	ITGB1BP1 (ENSUPAG00010011629) #21	CPSF3 (ENSUPAG00010011610) #22	ENSUPAG00010011577 #23	ADAM17 (ENSUPAG00010011539) #24	YWHAQ (ENSUPAG00010011534) ##25	TAF1B (ENSUPAG00010011508) #27	GRHL1 (ENSUPAG00010011483) #28	KLF11 (ENSUPAG00010011457) #29	CYS1 (ENSUPAG00010011444)	HPCAL1 (ENSUPAG00010011428) #31	ODC1 (ENSUPAG00010011416) #32	NOL10 (ENSUPAG00010011386) #33	ATP6V1C2 (ENSUPAG00010011265) #34	PDIA6 (ENSUPAG00010011237) #35	KCNF1 (ENSUPAG00010011227)	C2orf50 (ENSUPAG00010011218)	SLC66A3 (ENSUPAG00010011204) #37
Squirrel	MODERN SPECIES	132	TRAPPC12 (ENSSTOG00000027157)	ADI1 (ENSSTOG00000029152)	RNASEH1 (ENSSTOG00000012774)	RPS7 (ENSSTOG00000024830)	COLEC11 (ENSSTOG00000020387)	ALLC (ENSSTOG00000002136)	DCDC2C (ENSSTOG00000020234)	CMPK2 (ENSSTOG00000019402)	RSAD2 (ENSSTOG00000006147)	RNF144A (ENSSTOG00000027570)	ID2 (ENSSTOG00000019401)	KIDINS220 (ENSSTOG00000013232)	MBOAT2 (ENSSTOG00000020147)	ASAP2 (ENSSTOG00000004398) #19	ITGB1BP1 (ENSSTOG00000004464) #21	CPSF3 (ENSSTOG00000004476) #22	ENSSTOG00000004500 #23	ADAM17 (ENSSTOG00000004510) #24	ENSSTOG00000024378 ##25	TAF1B (ENSSTOG00000002419) #27	GRHL1 (ENSSTOG00000019842) #28	ENSSTOG00000030936 #29	ENSSTOG00000033669 ##30	HPCAL1 (ENSSTOG00000001514) #31	ENSSTOG00000000386 #32	NOL10 (ENSSTOG00000005485) #33	ATP6V1C2 (ENSSTOG00000005527) #34	PDIA6 (ENSSTOG00000005550) #35	C2orf50 (ENSSTOG00000002600)	SLC66A3 (ENSSTOG00000027023) #37	ROCK2 (ENSSTOG00000002624)
Alpin marmot	MODERN SPECIES	6	ENSMMMG00000022860	RPS7 (ENSMMMG00000022853)	COLEC11 (ENSMMMG00000022843)	ALLC (ENSMMMG00000022836)	DCDC2C (ENSMMMG00000022831)	ENSMMMG00000022822	SOX11 (ENSMMMG00000022819)	CMPK2 (ENSMMMG00000022812)	RSAD2 (ENSMMMG00000022810)	RNF144A (ENSMMMG00000022809)	ID2 (ENSMMMG00000022803)	KIDINS220 (ENSMMMG00000022748)	MBOAT2 (ENSMMMG00000022735)	ASAP2 (ENSMMMG00000022671) #19	ITGB1BP1 (ENSMMMG00000022669) #21	CPSF3 (ENSMMMG00000022663) #22	IAH1 (ENSMMMG00000022658) #23	ADAM17 (ENSMMMG00000022654) #24	YWHAQ (ENSMMMG00000022652) #25	TAF1B (ENSMMMG00000022638) #27	GRHL1 (ENSMMMG00000022631) #28	KLF11 (ENSMMMG00000022629) #29	ENSMMMG00000022625	ENSMMMG00000022624 ##30	HPCAL1 (ENSMMMG00000022618) #31	ODC1 (ENSMMMG00000022615) #32	NOL10 (ENSMMMG00000022607) #33	ATP6V1C2 (ENSMMMG00000022583) #34	PDIA6 (ENSMMMG00000022575) #35	KCNF1 (ENSMMMG00000022573)	C2orf50 (ENSMMMG00000022565)
Eurasian red squirrel	MODERN SPECIES	5	ADI1 (ENSSVLG00005021776)	RNASEH1 (ENSSVLG00005021750)	ENSSVLG00005021713	COLEC11 (ENSSVLG00005021395)	ALLC (ENSSVLG00005021266)	DCDC2C (ENSSVLG00005021143)	SOX11 (ENSSVLG00005021089)	CMPK2 (ENSSVLG00005020981)	RSAD2 (ENSSVLG00005020911)	RNF144A (ENSSVLG00005020868)	ID2 (ENSSVLG00005020830)	KIDINS220 (ENSSVLG00005020790)	MBOAT2 (ENSSVLG00005020748)	ASAP2 (ENSSVLG00005020310) #19	ITGB1BP1 (ENSSVLG00005020179) #21	CPSF3 (ENSSVLG00005020098) #22	IAH1 (ENSSVLG00005019997) #23	ADAM17 (ENSSVLG00005019936) #24	YWHAQ (ENSSVLG00005019899) #25	ENSSVLG00005019881	ENSSVLG00005019695 #27	ENSSVLG00005019438 #28	KLF11 (ENSSVLG00005019337) #29	CYS1 (ENSSVLG00005019295)	ENSSVLG00005019233 ##30	HPCAL1 (ENSSVLG00005019176) #31	ENSSVLG00005019056 #32	NOL10 (ENSSVLG00005018977) #33	ENSSVLG00005018931	ATP6V1C2 (ENSSVLG00005018543) #34	PDIA6 (ENSSVLG00005018305) #35
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Kangaroo rat	MODERN SPECIES	339									Rsad2 (ENSDORG00000008537)	Rnf144a (ENSDORG00000010145)	Id2 (ENSDORG00000014815)	Kidins220 (ENSDORG00000014817)	Mboat2 (ENSDORG00000007348)	Asap2 (ENSDORG00000014261) #19	Itgb1bp1 (ENSDORG00000014262) #21	Cpsf3 (ENSDORG00000014263) #22	Adam17 (ENSDORG00000014267) #24	ENSDORG00000028741 ##25	Taf1b (ENSDORG00000010154) #27	ENSDORG00000028599 #28	ENSDORG00000024766 #28	ENSDORG00000024620 #29	Rrm2 (ENSDORG00000002514) ##30	Hpcal1 (ENSDORG00000007055) #31	Odc1 (ENSDORG00000002669) #32	Nol10 (ENSDORG00000001331) #33	Atp6v1c2 (ENSDORG00000003593) #34	Pdia6 (ENSDORG00000003594) #35	Kcnf1 (ENSDORG00000026132)	ENSDORG00000027660	Pqlc3 (ENSDORG00000025612) #37
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Lesser Egyptian jerboa	MODERN SPECIES	74		Sos1 (ENSJJAG00000013772)	Arhgef33 (ENSJJAG00000001327)	ENSJJAG00000018800	Dhx57 (ENSJJAG00000023202)	ENSJJAG00000024348	Gemin6 (ENSJJAG00000021310)	Ttc39d (ENSJJAG00000012034)	ENSJJAG00000023079	Galm (ENSJJAG00000023585)	Hnrnpll (ENSJJAG00000024192)	Kidins220 (ENSJJAG00000015011)	Mboat2 (ENSJJAG00000011516)	Asap2 (ENSJJAG00000001039) #19	Itgb1bp1 (ENSJJAG00000022716) #21	Cpsf3 (ENSJJAG00000023415) #22	Iah1 (ENSJJAG00000015466) #23	Adam17 (ENSJJAG00000020057) #24	Ywhaq (ENSJJAG00000008194) #25	ENSJJAG00000011210	Plek (ENSJJAG00000005757)	Cnrip1 (ENSJJAG00000016204)	Ppp3r1 (ENSJJAG00000016869)	Pno1 (ENSJJAG00000022862)	Dnaaf10 (ENSJJAG00000019935)	ENSJJAG00000023186	ENSJJAG00000021064	ENSJJAG00000011226	Meis1 (ENSJJAG00000015459)	Spred2 (ENSJJAG00000020977)	Actr2 (ENSJJAG00000008642)
Muroidea	ANCESTRAL SPECIES	21	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Upper Galilee mountains blind mole rat	MODERN SPECIES	1517	Rnaseh1 (ENSNGAG00000015966)	Rps7 (ENSNGAG00000015037)	Colec11 (ENSNGAG00000014244)	Allc (ENSNGAG00000004596)	ENSNGAG00000002422	ENSNGAG00000017946	Sox11 (ENSNGAG00000016772)	Cmpk2 (ENSNGAG00000020998)	Rsad2 (ENSNGAG00000020530)	Rnf144a (ENSNGAG00000018727)	Id2 (ENSNGAG00000018053)	Kidins220 (ENSNGAG00000012753)	Mboat2 (ENSNGAG00000004975)	Asap2 (ENSNGAG00000020450) #19	Itgb1bp1 (ENSNGAG00000015478) #21	Cpsf3 (ENSNGAG00000019836) #22	Iah1 (ENSNGAG00000017153) #23	Adam17 (ENSNGAG00000016571) #24	Ywhaq (ENSNGAG00000012388) #25	ENSNGAG00000015636	Taf1b (ENSNGAG00000010048) #27	Grhl1 (ENSNGAG00000004562) #28	Klf11 (ENSNGAG00000018758) #29	Cys1 (ENSNGAG00000015080)	Rrm2 (ENSNGAG00000013008) #30	Hpcal1 (ENSNGAG00000012465) #31	ENSNGAG00000001599 #32	ENSNGAG00000019061	Nol10 (ENSNGAG00000015506) #33	Atp6v1c2 (ENSNGAG00000000867) #34	Pdia6 (ENSNGAG00000014585) #35
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Prairie vole	MODERN SPECIES	93							Cmpk2 (ENSMOCG00000000423)	ENSMOCG00000020673	Rnf144a (ENSMOCG00000000314)	ENSMOCG00000012398	Id2 (ENSMOCG00000002908)	Kidins220 (ENSMOCG00000011232)	Mboat2 (ENSMOCG00000021674)	Asap2 (ENSMOCG00000019749) #19	Itgb1bp1 (ENSMOCG00000017072) #21	Cpsf3 (ENSMOCG00000020067) #22	Iah1 (ENSMOCG00000017872) #23	Adam17 (ENSMOCG00000010700) #24	Ywhaq (ENSMOCG00000020316) #25	Taf1b (ENSMOCG00000005916) #27	Grhl1 (ENSMOCG00000019210) #28	ENSMOCG00000003070	ENSMOCG00000014995 #29	Cys1 (ENSMOCG00000017656)	ENSMOCG00000018114 ##30	ENSMOCG00000010909 ##30	Hpcal1 (ENSMOCG00000014411) #31	ENSMOCG00000010314 #32	Nol10 (ENSMOCG00000021564) #33	Atp6v1c2 (ENSMOCG00000019580) #34	Pdia6 (ENSMOCG00000014991) #35
Northern American deer mouse	MODERN SPECIES	14	Adi1 (ENSPEMG00000022007)	Rnaseh1 (ENSPEMG00000022465)	Rps7 (ENSPEMG00000011185)	Colec11 (ENSPEMG00000021365)	Allc (ENSPEMG00000022050)	ENSPEMG00000022353	Sox11 (ENSPEMG00000014211)	Cmpk2 (ENSPEMG00000009342)	Rsad2 (ENSPEMG00000008928)	Rnf144a (ENSPEMG00000008311)	Id2 (ENSPEMG00000006926)	Kidins220 (ENSPEMG00000002148)	Mboat2 (ENSPEMG00000000110)	Asap2 (ENSPEMG00000016930) #19	Itgb1bp1 (ENSPEMG00000012447) #21	Cpsf3 (ENSPEMG00000017668) #22	Iah1 (ENSPEMG00000016641) #23	Adam17 (ENSPEMG00000015840) #24	ENSPEMG00000027877 ##25	Taf1b (ENSPEMG00000013642) #27	Grhl1 (ENSPEMG00000012157) #28	Klf11 (ENSPEMG00000011311) #29	Cys1 (ENSPEMG00000025881)	Rrm2 (ENSPEMG00000010359) ##30	Hpcal1 (ENSPEMG00000025119) #31	Nol10 (ENSPEMG00000008676) #33	Atp6v1c2 (ENSPEMG00000007660) #34	Pdia6 (ENSPEMG00000002821) #35	Kcnf1 (ENSPEMG00000013250)	ENSPEMG00000025861	Pqlc3 (ENSPEMG00000020282) #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.g #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Chinese hamster chok1gshd	MODERN SPECIES	229	Rnaseh1 (ENSCGRG00001008950)	Rps7 (ENSCGRG00001017318)	Colec11 (ENSCGRG00001015605)	Allc (ENSCGRG00001009626)	ENSCGRG00001022074	Sox11 (ENSCGRG00001007958)	Cmpk2 (ENSCGRG00001018716)	Rsad2 (ENSCGRG00001014337)	Rnf144a (ENSCGRG00001007035)	ENSCGRG00001023880	Id2 (ENSCGRG00001023029)	Kidins220 (ENSCGRG00001016681)	Mboat2 (ENSCGRG00001015841)	Asap2 (ENSCGRG00001022680) #19	Itgb1bp1 (ENSCGRG00001000664) #21	Cpsf3 (ENSCGRG00001013134) #22	Iah1 (ENSCGRG00001019624) #23	Adam17 (ENSCGRG00001024922) #24	Ywhaq (ENSCGRG00001024724) #25	ENSCGRG00001018516 #27	Grhl1 (ENSCGRG00001024970) #28	Klf11 (ENSCGRG00001018478) #29	Cys1 (ENSCGRG00001013951)	Rrm2 (ENSCGRG00001007841) ##30	Hpcal1 (ENSCGRG00001023170) #31	ENSCGRG00001015979 #32	Nol10 (ENSCGRG00001009928) #33	Atp6v1c2 (ENSCGRG00001021615) #34	Pdia6 (ENSCGRG00001017472) #35	Kcnf1 (ENSCGRG00001014274)	2410004P03Rik (ENSCGRG00001003389)
Golden Hamster	MODERN SPECIES	737	Adi1 (ENSMAUG00000017657)	Rnaseh1 (ENSMAUG00000014957)	Rps7 (ENSMAUG00000012178)	Colec11 (ENSMAUG00000012547)	Allc (ENSMAUG00000015102)	ENSMAUG00000010849	Sox11 (ENSMAUG00000016656)	Cmpk2 (ENSMAUG00000017501)	Rsad2 (ENSMAUG00000008669)	Rnf144a (ENSMAUG00000014880)	Id2 (ENSMAUG00000012468)	Kidins220 (ENSMAUG00000011599)	Mboat2 (ENSMAUG00000005505)	Asap2 (ENSMAUG00000001240) #19	Itgb1bp1 (ENSMAUG00000017998) #21	Cpsf3 (ENSMAUG00000000166) #22	Iah1 (ENSMAUG00000018865) #23	Adam17 (ENSMAUG00000015291) #24	ENSMAUG00000017035 ##25	Taf1b (ENSMAUG00000013477) #27	Grhl1 (ENSMAUG00000013649) #28	ENSMAUG00000016595 ##30
Murinae	ANCESTRAL SPECIES	8	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B #37	ENSGT00940000154459.B	ENSGT00940000160213	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a #32	ENSGT00940000154645.A #31	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000156714	ENSGT00940000156464	ENSGT00940000157701	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652
Mus	ANCESTRAL SPECIES	10	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B #37	ENSGT00940000154459.B	ENSGT00940000160213	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a #32	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000156714	ENSGT00940000156464	ENSGT00940000157701	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c #37	ENSGT00940000154459.B	ENSGT00940000160213	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000156714	ENSGT00940000156464	ENSGT00940000157701	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652
Mus_B	ANCESTRAL SPECIES	17	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c #37	ENSGT00940000154459.B	ENSGT00940000160213	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT00940000154645.A #31	ENSGT01060000248676	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000156714	ENSGT00940000156464	ENSGT00940000157701	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c #37	ENSGT00940000154459.B	ENSGT00940000160213	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT00940000154645.A #31	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.v ##30	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000156714	ENSGT00940000156464	ENSGT00940000157701	ENSGT00390000013670	ENSGT00940000154030.a.b	ENSGT00940000161652
Steppe mouse	MODERN SPECIES	2460														Asap2 (ENSMSIG00000022503) #19	Itgb1bp1 (ENSMSIG00000022470) #21	Cpsf3 (ENSMSIG00000022405) #22	Iah1 (ENSMSIG00000022381) #23	Adam17 (ENSMSIG00000022289) #24	Ywhaq (ENSMSIG00000022246) #25
spretus	MODERN SPECIES	3	Lratd1 (MGP_SPRETEiJ_G0018466)	Trib2 (MGP_SPRETEiJ_G0018467)	Lpin1 (MGP_SPRETEiJ_G0018468)	Ntsr2 (MGP_SPRETEiJ_G0018469)	Greb1 (MGP_SPRETEiJ_G0018470)	E2f6 (MGP_SPRETEiJ_G0018471)	Rock2 (MGP_SPRETEiJ_G0018472)	MGP_SPRETEiJ_G0018473 #37	2410004P03Rik (MGP_SPRETEiJ_G0018474)	Kcnf1 (MGP_SPRETEiJ_G0018475)	Pdia6 (MGP_SPRETEiJ_G0018476) #35	Atp6v1c2 (MGP_SPRETEiJ_G0018477) #34	Nol10 (MGP_SPRETEiJ_G0018478) #33	Asap2 (MGP_SPRETEiJ_G0018479) #19	Itgb1bp1 (MGP_SPRETEiJ_G0018480) #21	Cpsf3 (MGP_SPRETEiJ_G0018481) #22	Iah1 (MGP_SPRETEiJ_G0018482) #23	Adam17 (MGP_SPRETEiJ_G0018483) #24	Ywhaq (MGP_SPRETEiJ_G0018484) #25	Taf1b (MGP_SPRETEiJ_G0018485) #27	MGP_SPRETEiJ_G0018486	Grhl1 (MGP_SPRETEiJ_G0018487) #28	Klf11 (MGP_SPRETEiJ_G0018488) #29	Cys1 (MGP_SPRETEiJ_G0018489)	Rrm2 (MGP_SPRETEiJ_G0018490) ##30	Mboat2 (MGP_SPRETEiJ_G0018491)	Kidins220 (MGP_SPRETEiJ_G0018492)	MGP_SPRETEiJ_G0018493	Rnf144a (MGP_SPRETEiJ_G0018494)	Rsad2 (MGP_SPRETEiJ_G0018495)	Cmpk2 (MGP_SPRETEiJ_G0018496)
Mouse	MODERN SPECIES	3	Greb1 (ENSMUSG00000036523)	E2f6 (ENSMUSG00000057469)	Rock2 (ENSMUSG00000020580)	Pqlc3 (ENSMUSG00000045679) #37	2410004P03Rik (ENSMUSG00000071398)	Kcnf1 (ENSMUSG00000051726)	Pdia6 (ENSMUSG00000020571) #35	Atp6v1c2 (ENSMUSG00000020566) #34	Nol10 (ENSMUSG00000061458) #33	Odc1 (ENSMUSG00000011179) #32	Hpcal1 (ENSMUSG00000071379) #31	5730507C01Rik (ENSMUSG00000073197)	Gm21863 (ENSMUSG00000095470)	Asap2 (ENSMUSG00000052632) #19	Itgb1bp1 (ENSMUSG00000062352) #21	Cpsf3 (ENSMUSG00000054309) #22	Iah1 (ENSMUSG00000062054) #23	Adam17 (ENSMUSG00000052593) #24	Ywhaq (ENSMUSG00000076432) #25	9030624G23Rik (ENSMUSG00000073158)	Taf1b (ENSMUSG00000059669) #27	Grhl1 (ENSMUSG00000020656) #28	Klf11 (ENSMUSG00000020653) #29	Cys1 (ENSMUSG00000062563)	Rrm2 (ENSMUSG00000020649) ##30	Mboat2 (ENSMUSG00000020646)	Kidins220 (ENSMUSG00000036333)	Id2 (ENSMUSG00000020644)	Rnf144a (ENSMUSG00000020642)	Rsad2 (ENSMUSG00000020641)	Cmpk2 (ENSMUSG00000020638)
Ryukyu mouse	MODERN SPECIES	3	Trib2 (MGP_CAROLIEiJ_G0017625)	Lpin1 (MGP_CAROLIEiJ_G0017626)	Ntsr2 (MGP_CAROLIEiJ_G0017627)	Greb1 (MGP_CAROLIEiJ_G0017628)	MGP_CAROLIEiJ_G0017629	Rock2 (MGP_CAROLIEiJ_G0017630)	MGP_CAROLIEiJ_G0017631 #37	MGP_CAROLIEiJ_G0017632	Kcnf1 (MGP_CAROLIEiJ_G0017633)	Pdia6 (MGP_CAROLIEiJ_G0017634) #35	Atp6v1c2 (MGP_CAROLIEiJ_G0017635) #34	Nol10 (MGP_CAROLIEiJ_G0017636) #33	Odc1 (MGP_CAROLIEiJ_G0017637) #32	Asap2 (MGP_CAROLIEiJ_G0017638) #19	Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #21	Cpsf3 (MGP_CAROLIEiJ_G0017640) #22	Iah1 (MGP_CAROLIEiJ_G0017641) #23	Adam17 (MGP_CAROLIEiJ_G0017642) #24	Ywhaq (MGP_CAROLIEiJ_G0017643) #25	Taf1b (MGP_CAROLIEiJ_G0017644) #27	Grhl1 (MGP_CAROLIEiJ_G0017645) #28	Klf11 (MGP_CAROLIEiJ_G0017646) #29	Cys1 (MGP_CAROLIEiJ_G0017647)	Rrm2 (MGP_CAROLIEiJ_G0017648) ##30	Mboat2 (MGP_CAROLIEiJ_G0017649)	Kidins220 (MGP_CAROLIEiJ_G0017650)	MGP_CAROLIEiJ_G0017651	Rnf144a (MGP_CAROLIEiJ_G0017652)	Rsad2 (MGP_CAROLIEiJ_G0017653)	Cmpk2 (MGP_CAROLIEiJ_G0017654)	Sox11 (MGP_CAROLIEiJ_G0017655)
Shrew mouse	MODERN SPECIES	20	Lpin1 (MGP_PahariEiJ_G0029382)	MGP_PahariEiJ_G0029383	Greb1 (MGP_PahariEiJ_G0029384)	E2f6 (MGP_PahariEiJ_G0029385)	MGP_PahariEiJ_G0029386	Rock2 (MGP_PahariEiJ_G0029387)	Pqlc3 (MGP_PahariEiJ_G0029388) #37	MGP_PahariEiJ_G0029389	Kcnf1 (MGP_PahariEiJ_G0029390)	Pdia6 (MGP_PahariEiJ_G0029391) #35	Atp6v1c2 (MGP_PahariEiJ_G0029392) #34	Nol10 (MGP_PahariEiJ_G0029393) #33	Odc1 (MGP_PahariEiJ_G0029394) #32	Asap2 (MGP_PahariEiJ_G0029395) #19	Itgb1bp1 (MGP_PahariEiJ_G0029396) #21	Cpsf3 (MGP_PahariEiJ_G0029397) #22	Iah1 (MGP_PahariEiJ_G0029398) #23	Adam17 (MGP_PahariEiJ_G0029399) #24	MGP_PahariEiJ_G0029400 #25	MGP_PahariEiJ_G0029401 #27	MGP_PahariEiJ_G0029402 #28	Klf11 (MGP_PahariEiJ_G0029403) #29	Cys1 (MGP_PahariEiJ_G0029404)	MGP_PahariEiJ_G0029405 ##30	Mboat2 (MGP_PahariEiJ_G0029407)	Kidins220 (MGP_PahariEiJ_G0029408)	MGP_PahariEiJ_G0029409	Rnf144a (MGP_PahariEiJ_G0029410)	Rsad2 (MGP_PahariEiJ_G0029411)	Cmpk2 (MGP_PahariEiJ_G0029412)	Sox11 (MGP_PahariEiJ_G0029413)
Rat	MODERN SPECIES	16	Greb1 (ENSRNOG00000024651)	E2f6 (ENSRNOG00000004449)	Rock2 (ENSRNOG00000004496)	Slc66a3 (ENSRNOG00000005126) #37	C6h2orf50 (ENSRNOG00000024338)	Kcnf1 (ENSRNOG00000024310)	Pdia6 (ENSRNOG00000050197) #35	Atp6v1c2 (ENSRNOG00000050553) #34	Nol10 (ENSRNOG00000005344) #33	AABR07063703.1 (ENSRNOG00000046279)	Odc1 (ENSRNOG00000005424) #32	LOC120093238 (ENSRNOG00000032523)	Hpcal1 (ENSRNOG00000005492) #31	Asap2 (ENSRNOG00000061519) #19	Itgb1bp1 (ENSRNOG00000059402) #21	Cpsf3 (ENSRNOG00000052418) #22	Iah1 (ENSRNOG00000060853) #23	Adam17 (ENSRNOG00000060694) #24	Ywhaq (ENSRNOG00000051650) #25	Taf1b (ENSRNOG00000061415) #27	Rbm34-ps1 (ENSRNOG00000065550)	Grhl1 (ENSRNOG00000054989) #28	Klf11 (ENSRNOG00000054259) #29	Cys1 (ENSRNOG00000058891)	Rrm2 (ENSRNOG00000054286) ##30	Mboat2 (ENSRNOG00000061050)	Kidins220 (ENSRNOG00000023176)	LOC120093241 (ENSRNOG00000062523)	Id2 (ENSRNOG00000007237)	Rnf144a (ENSRNOG00000007370)	Rsad2 (ENSRNOG00000007539)
Lagomorpha	ANCESTRAL SPECIES	233												ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.a.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29
Rabbit	MODERN SPECIES	536									KIDINS220 (ENSOCUG00000003996)	MBOAT2 (ENSOCUG00000016985)	ASAP2 (ENSOCUG00000003719) #19	ENSOCUG00000003726 #21	IAH1 (ENSOCUG00000026669) #23	ADAM17 (ENSOCUG00000010474) #24	YWHAQ (ENSOCUG00000010482) #25	CPSF3 (ENSOCUG00000003728) #22	ENSOCUG00000028159	TAF1B (ENSOCUG00000005643) #27	GRHL1 (ENSOCUG00000017717) #28	KLF11 (ENSOCUG00000003809) #29
Pika	MODERN SPECIES	2207														ENSOPRG00000008852 #19	ITGB1BP1 (ENSOPRG00000008887) #21	CPSF3 (ENSOPRG00000008902) #22	IAH1 (ENSOPRG00000008947) #23	ADAM17 (ENSOPRG00000008960) #24	ENSOPRG00000008991 ##25	TAF1B (ENSOPRG00000008998) #27	ENSOPRG00000009027 #28
Tree shrew	MODERN SPECIES	2529														ENSTBEG00000008035 #19	ITGB1BP1 (ENSTBEG00000001622) #21	CPSF3 (ENSTBEG00000002707) #22	ADAM17 (ENSTBEG00000004343) #24	ENSTBEG00000006122 ##25	TAF1B (ENSTBEG00000006430) #27	GRHL1 (ENSTBEG00000007777) #28	KLF11 (ENSTBEG00000008268) #29
Primates	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hominidae	ANCESTRAL SPECIES	19	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464.o	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464.o	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Pan	ANCESTRAL SPECIES	17	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b.x	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464.o	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Chimpanzee	MODERN SPECIES	14	RNASEH1 (ENSPTRG00000011614)	RPS7 (ENSPTRG00000011615)	COLEC11 (ENSPTRG00000011616)	ALLC (ENSPTRG00000011618)	DCDC2C (ENSPTRG00000033961)	SOX11 (ENSPTRG00000045174)	CMPK2 (ENSPTRG00000011627)	RSAD2 (ENSPTRG00000011629)	RNF144A (ENSPTRG00000011630)	ID2 (ENSPTRG00000011632)	KIDINS220 (ENSPTRG00000011633)	MBOAT2 (ENSPTRG00000011634)	ASAP2 (ENSPTRG00000011636) #19	ENSPTRG00000043418	ITGB1BP1 (ENSPTRG00000011637) #21	CPSF3 (ENSPTRG00000011638) #22	IAH1 (ENSPTRG00000011639) #23	ADAM17 (ENSPTRG00000011640) #24	YWHAQ (ENSPTRG00000011641) #25	TAF1B (ENSPTRG00000011642) #27	GRHL1 (ENSPTRG00000011643) #28	KLF11 (ENSPTRG00000011645) #29	ENSPTRG00000046195	CYS1 (ENSPTRG00000030565)	RRM2 (ENSPTRG00000042985) #30	HPCAL1 (ENSPTRG00000011649) #31	ODC1 (ENSPTRG00000011650) #32	NOL10 (ENSPTRG00000011651) #33	ATP6V1C2 (ENSPTRG00000011652) #34	PDIA6 (ENSPTRG00000011653) #35	KCNF1 (ENSPTRG00000030563)
Bonobo	MODERN SPECIES	14	RPS7 (ENSPPAG00000039898)	COLEC11 (ENSPPAG00000038334)	ALLC (ENSPPAG00000043709)	DCDC2C (ENSPPAG00000035755)	ENSPPAG00000031455	ENSPPAG00000036968	ENSPPAG00000037362	RSAD2 (ENSPPAG00000039493)	RNF144A (ENSPPAG00000037389)	ID2 (ENSPPAG00000034410)	KIDINS220 (ENSPPAG00000041858)	MBOAT2 (ENSPPAG00000043445)	ENSPPAG00000043888	ASAP2 (ENSPPAG00000008883) #19	ITGB1BP1 (ENSPPAG00000039328) #21	CPSF3 (ENSPPAG00000042457) #22	IAH1 (ENSPPAG00000033783) #23	ADAM17 (ENSPPAG00000038185) #24	ENSPPAG00000043019 ##25	TAF1B (ENSPPAG00000031684) #27	GRHL1 (ENSPPAG00000030977) #28	KLF11 (ENSPPAG00000030099) #29	ENSPPAG00000010181	RRM2 (ENSPPAG00000040070) #30	HPCAL1 (ENSPPAG00000032513) #31	ODC1 (ENSPPAG00000004476) #32	NOL10 (ENSPPAG00000010631) #33	ATP6V1C2 (ENSPPAG00000028894) #34	PDIA6 (ENSPPAG00000028754) #35	KCNF1 (ENSPPAG00000042656)	C2orf50 (ENSPPAG00000042216)
Human	MODERN SPECIES	11	ADI1 (ENSG00000182551)	RNASEH1 (ENSG00000171865)	RPS7 (ENSG00000171863)	COLEC11 (ENSG00000118004)	ALLC (ENSG00000151360)	DCDC2C (ENSG00000214866)	SOX11 (ENSG00000176887)	CMPK2 (ENSG00000134326)	RSAD2 (ENSG00000134321)	RNF144A (ENSG00000151692)	ID2 (ENSG00000115738)	KIDINS220 (ENSG00000134313)	MBOAT2 (ENSG00000143797)	ASAP2 (ENSG00000151693) #19	ITGB1BP1 (ENSG00000119185) #21	CPSF3 (ENSG00000119203) #22	IAH1 (ENSG00000134330) #23	ADAM17 (ENSG00000151694) #24	YWHAQ (ENSG00000134308) #25	TAF1B (ENSG00000115750) #27	GRHL1 (ENSG00000134317) #28	KLF11 (ENSG00000172059) #29	CYS1 (ENSG00000205795)	RRM2 (ENSG00000171848) #30	HPCAL1 (ENSG00000115756) #31	ODC1 (ENSG00000115758) #32	NOL10 (ENSG00000115761) #33	ATP6V1C2 (ENSG00000143882) #34	PDIA6 (ENSG00000143870) #35	KCNF1 (ENSG00000162975)	C2orf50 (ENSG00000150873)
Gorilla	MODERN SPECIES	14	RPS7 (ENSGGOG00000023095)	COLEC11 (ENSGGOG00000009819)	ALLC (ENSGGOG00000009821)	DCDC2C (ENSGGOG00000034923)	SOX11 (ENSGGOG00000037622)	ENSGGOG00000004066	ENSGGOG00000036393	RSAD2 (ENSGGOG00000010720)	RNF144A (ENSGGOG00000039753)	ENSGGOG00000042490	ENSGGOG00000042851	KIDINS220 (ENSGGOG00000009822)	MBOAT2 (ENSGGOG00000040459)	ASAP2 (ENSGGOG00000001744) #19	ITGB1BP1 (ENSGGOG00000001754) #21	CPSF3 (ENSGGOG00000001757) #22	IAH1 (ENSGGOG00000001760) #23	ENSGGOG00000039328	ADAM17 (ENSGGOG00000013128) #24	ENSGGOG00000001569 #25	TAF1B (ENSGGOG00000002685) #27	GRHL1 (ENSGGOG00000002692) #28	KLF11 (ENSGGOG00000012494) #29	ENSGGOG00000027524	RRM2 (ENSGGOG00000040108) #30	HPCAL1 (ENSGGOG00000007141) #31	ODC1 (ENSGGOG00000007991) #32	NOL10 (ENSGGOG00000034826) #33	ATP6V1C2 (ENSGGOG00000002273) #34	PDIA6 (ENSGGOG00000002278) #35	KCNF1 (ENSGGOG00000009528)
Orangutan	MODERN SPECIES	14	RPS7 (ENSPPYG00000025872)	COLEC11 (ENSPPYG00000012682)	ALLC (ENSPPYG00000012681)	ENSPPYG00000012680	SOX11 (ENSPPYG00000036338)	CMPK2 (ENSPPYG00000012675)	RSAD2 (ENSPPYG00000012674)	RNF144A (ENSPPYG00000012673)	ENSPPYG00000030180	ID2 (ENSPPYG00000012719)	KIDINS220 (ENSPPYG00000012670)	MBOAT2 (ENSPPYG00000012669)	ENSPPYG00000037864	ASAP2 (ENSPPYG00000012668) #19	ITGB1BP1 (ENSPPYG00000031588) #21	CPSF3 (ENSPPYG00000012666) #22	IAH1 (ENSPPYG00000012665) #23	ADAM17 (ENSPPYG00000012664) #24	YWHAQ (ENSPPYG00000012663) #25	TAF1B (ENSPPYG00000012662) #27	GRHL1 (ENSPPYG00000012661) #28	KLF11 (ENSPPYG00000012659) #29	CYS1 (ENSPPYG00000012657)	RRM2 (ENSPPYG00000012656) #30	HPCAL1 (ENSPPYG00000012655) #31	ODC1 (ENSPPYG00000012654) #32	NOL10 (ENSPPYG00000012653) #33	ATP6V1C2 (ENSPPYG00000012652) #34	PDIA6 (ENSPPYG00000012651) #35	KCNF1 (ENSPPYG00000041457)	C2orf50 (ENSPPYG00000012710)
Gibbon	MODERN SPECIES	9	RNASEH1 (ENSNLEG00000015400)	RPS7 (ENSNLEG00000034280)	ENSNLEG00000031083	ALLC (ENSNLEG00000015418)	DCDC2C (ENSNLEG00000015424)	ENSNLEG00000031381	RSAD2 (ENSNLEG00000015429)	RNF144A (ENSNLEG00000015431)	ENSNLEG00000035496	ID2 (ENSNLEG00000013192)	KIDINS220 (ENSNLEG00000013206)	MBOAT2 (ENSNLEG00000013229)	ASAP2 (ENSNLEG00000013248) #19	ENSNLEG00000032390	ITGB1BP1 (ENSNLEG00000013322) #21	CPSF3 (ENSNLEG00000013359) #22	IAH1 (ENSNLEG00000013435) #23	ADAM17 (ENSNLEG00000013455) #24	ENSNLEG00000034153	YWHAQ (ENSNLEG00000013534) #25	TAF1B (ENSNLEG00000013577) #27	GRHL1 (ENSNLEG00000013634) #28	KLF11 (ENSNLEG00000013701) #29	ENSNLEG00000031300	ENSNLEG00000031728	RRM2 (ENSNLEG00000035605) #30	HPCAL1 (ENSNLEG00000013802) #31	ODC1 (ENSNLEG00000013820) #32	NOL10 (ENSNLEG00000013851) #33	ATP6V1C2 (ENSNLEG00000013902) #34	PDIA6 (ENSNLEG00000013916) #35
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000159468	ENSGT00390000014122.i.b.a.a.b	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526
Pig-tailed macaque	MODERN SPECIES	127					SOX11 (ENSMNEG00000008816)	ENSMNEG00000032217	CMPK2 (ENSMNEG00000018646)	RSAD2 (ENSMNEG00000040478)	RNF144A (ENSMNEG00000030505)	ID2 (ENSMNEG00000039277)	KIDINS220 (ENSMNEG00000044570)	MBOAT2 (ENSMNEG00000036853)	ENSMNEG00000042727	ASAP2 (ENSMNEG00000020414) #19	ITGB1BP1 (ENSMNEG00000043390) #21	CPSF3 (ENSMNEG00000039447) #22	IAH1 (ENSMNEG00000038428) #23	ENSMNEG00000039629	ADAM17 (ENSMNEG00000031025) #24	YWHAQ (ENSMNEG00000035884) #25	TAF1B (ENSMNEG00000007382) #27	GRHL1 (ENSMNEG00000030598) #28	KLF11 (ENSMNEG00000034723) #29	ENSMNEG00000018854	CYS1 (ENSMNEG00000030186)	RRM2 (ENSMNEG00000028272) #30	HPCAL1 (ENSMNEG00000033423) #31	ODC1 (ENSMNEG00000043400) #32	NOL10 (ENSMNEG00000039685) #33	ENSMNEG00000038801	ATP6V1C2 (ENSMNEG00000037515) #34
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000170471.A.b.b.a.b.b	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a	ENSGT00940000154030.a.b	ENSGT00910000148182	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Crab-eating macaque	MODERN SPECIES	4	DCDC2C (ENSMFAG00000042487)	ENSMFAG00000061013	ENSMFAG00000057748	ENSMFAG00000049271	ENSMFAG00000060203	ENSMFAG00000048573	ENSMFAG00000049943	RSAD2 (ENSMFAG00000055130)	RNF144A (ENSMFAG00000040034)	ENSMFAG00000057704	ID2 (ENSMFAG00000000039)	KIDINS220 (ENSMFAG00000031830)	MBOAT2 (ENSMFAG00000003741)	ASAP2 (ENSMFAG00000037845) #19	ITGB1BP1 (ENSMFAG00000045554) #21	CPSF3 (ENSMFAG00000001339) #22	IAH1 (ENSMFAG00000039055) #23	ADAM17 (ENSMFAG00000039177) #24	ENSMFAG00000004741 ##25	TAF1B (ENSMFAG00000041401) #27	GRHL1 (ENSMFAG00000032356) #28	KLF11 (ENSMFAG00000039490) #29	ENSMFAG00000052007	RRM2 (ENSMFAG00000040783) #30	HPCAL1 (ENSMFAG00000044146) #31	ENSMFAG00000038147 #32	NOL10 (ENSMFAG00000041289) #33	ATP6V1C2 (ENSMFAG00000032936) #34	PDIA6 (ENSMFAG00000037618) #35	KCNF1 (ENSMFAG00000041973)	C2orf50 (ENSMFAG00000032471)
Rhesus	MODERN SPECIES	4	ALLC (ENSMMUG00000004632)	DCDC2C (ENSMMUG00000023273)	ENSMMUG00000052757	ENSMMUG00000061676	SOX11 (ENSMMUG00000038367)	ENSMMUG00000058497	CMPK2 (ENSMMUG00000015968)	ENSMMUG00000050777	RSAD2 (ENSMMUG00000015969)	RNF144A (ENSMMUG00000045908)	ID2 (ENSMMUG00000003237)	KIDINS220 (ENSMMUG00000021036)	MBOAT2 (ENSMMUG00000021037)	ASAP2 (ENSMMUG00000018033) #19	ITGB1BP1 (ENSMMUG00000018036)	CPSF3 (ENSMMUG00000018038) #22	IAH1 (ENSMMUG00000018045) #23	ADAM17 (ENSMMUG00000012921) #24	ENSMMUG00000062403	YWHAQ (ENSMMUG00000006965) #25	TAF1B (ENSMMUG00000001530) #27	GRHL1 (ENSMMUG00000001535) #28	KLF11 (ENSMMUG00000002054) #29	CYS1 (ENSMMUG00000030941)	RRM2 (ENSMMUG00000002057) #30	ENSMMUG00000053871	HPCAL1 (ENSMMUG00000020440) #31	ODC1 (ENSMMUG00000020441) #32	NOL10 (ENSMMUG00000010671) #33	ATP6V1C2 (ENSMMUG00000010320) #34	PDIA6 (ENSMMUG00000012864) #35
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526
Olive baboon	MODERN SPECIES	5	RNASEH1 (ENSPANG00000000443)	ENSPANG00000011092	COLEC11 (ENSPANG00000011091)	ALLC (ENSPANG00000017775)	DCDC2C (ENSPANG00000007153)	SOX11 (ENSPANG00000041661)	ENSPANG00000051199	CMPK2 (ENSPANG00000026237)	RSAD2 (ENSPANG00000026240)	RNF144A (ENSPANG00000023570)	ID2 (ENSPANG00000039736)	KIDINS220 (ENSPANG00000021602)	MBOAT2 (ENSPANG00000022343)	ASAP2 (ENSPANG00000023973) #19	ITGB1BP1 (ENSPANG00000016797) #21	CPSF3 (ENSPANG00000016798) #22	IAH1 (ENSPANG00000009398) #23	ADAM17 (ENSPANG00000000727) #24	YWHAQ (ENSPANG00000037411) #25	TAF1B (ENSPANG00000013803) #27	GRHL1 (ENSPANG00000020814) #28	ENSPANG00000031829	CYS1 (ENSPANG00000005251)	RRM2 (ENSPANG00000018767) #30	ENSPANG00000044848	HPCAL1 (ENSPANG00000042769) #31	ENSPANG00000011223 #32	NOL10 (ENSPANG00000006259) #33	ATP6V1C2 (ENSPANG00000017189) #34	PDIA6 (ENSPANG00000006258) #35	KCNF1 (ENSPANG00000015920)
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00910000146975	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00860000136202	ENSGT00390000016845	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Sooty mangabey	MODERN SPECIES	121	RPS7 (ENSCATG00000029336)	COLEC11 (ENSCATG00000029509)	ALLC (ENSCATG00000030695)	DCDC2C (ENSCATG00000025057)	SOX11 (ENSCATG00000020144)	ENSCATG00000018474	CMPK2 (ENSCATG00000040689)	RSAD2 (ENSCATG00000030147)	RNF144A (ENSCATG00000033975)	ID2 (ENSCATG00000030248)	KIDINS220 (ENSCATG00000041275)	MBOAT2 (ENSCATG00000040596)	ENSCATG00000011380	ASAP2 (ENSCATG00000035990) #19	ITGB1BP1 (ENSCATG00000036040) #21	CPSF3 (ENSCATG00000014770) #22	IAH1 (ENSCATG00000029613) #23	ADAM17 (ENSCATG00000037482) #24	ENSCATG00000023335 #25	TAF1B (ENSCATG00000039789) #27	GRHL1 (ENSCATG00000027324) #28	KLF11 (ENSCATG00000037396) #29	ENSCATG00000033874	CYS1 (ENSCATG00000014723)	ENSCATG00000031151 #30
Drill	MODERN SPECIES	1452										ID2 (ENSMLEG00000040695)	KIDINS220 (ENSMLEG00000035601)	MBOAT2 (ENSMLEG00000037301)	ENSMLEG00000040215	ASAP2 (ENSMLEG00000033183) #19	ITGB1BP1 (ENSMLEG00000031967) #21	CPSF3 (ENSMLEG00000026825) #22	IAH1 (ENSMLEG00000044290) #23	ADAM17 (ENSMLEG00000042175) #24	YWHAQ (ENSMLEG00000030005) #25	TAF1B (ENSMLEG00000043999) #27	GRHL1 (ENSMLEG00000036453) #28	KLF11 (ENSMLEG00000036570) #29	ENSMLEG00000042927	ENSMLEG00000035635 #30	HPCAL1 (ENSMLEG00000039247) #31	ODC1 (ENSMLEG00000039068) #32	NOL10 (ENSMLEG00000011854) #33	ENSMLEG00000033772	ATP6V1C2 (ENSMLEG00000028199) #34	PDIA6 (ENSMLEG00000033930) #35	C2orf50 (ENSMLEG00000038536)
Vervet Monkey	MODERN SPECIES	5	RNASEH1 (ENSCSAG00000006943)	RPS7 (ENSCSAG00000006946)	COLEC11 (ENSCSAG00000006951)	ALLC (ENSCSAG00000006987)	DCDC2C (ENSCSAG00000007016)	SOX11 (ENSCSAG00000000373)	ENSCSAG00000007025	CMPK2 (ENSCSAG00000007040)	RSAD2 (ENSCSAG00000007051)	RNF144A (ENSCSAG00000007058)	ID2 (ENSCSAG00000007060)	KIDINS220 (ENSCSAG00000007084)	MBOAT2 (ENSCSAG00000007093)	ASAP2 (ENSCSAG00000007108) #19	ITGB1BP1 (ENSCSAG00000007115) #21	CPSF3 (ENSCSAG00000007125) #22	IAH1 (ENSCSAG00000007130) #23	ADAM17 (ENSCSAG00000007138) #24	ENSCSAG00000007145 ##25	TAF1B (ENSCSAG00000007150) #27	GRHL1 (ENSCSAG00000007158) #28	KLF11 (ENSCSAG00000007163) #29	CYS1 (ENSCSAG00000007167)	ENSCSAG00000007172	RRM2 (ENSCSAG00000007201) #30	HPCAL1 (ENSCSAG00000007213) #31	ENSCSAG00000007220 #32	NOL10 (ENSCSAG00000007229) #33	ATP6V1C2 (ENSCSAG00000007259) #34	PDIA6 (ENSCSAG00000007282) #35	KCNF1 (ENSCSAG00000000374)
Rhinopithecus	ANCESTRAL SPECIES	174										ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Golden snub-nosed monkey	MODERN SPECIES	2175									ID2 (ENSRROG00000004887)	KIDINS220 (ENSRROG00000036660)	MBOAT2 (ENSRROG00000045314)	ENSRROG00000033889	ENSRROG00000035274	ASAP2 (ENSRROG00000042260) #19	ENSRROG00000044107 #21	CPSF3 (ENSRROG00000033792) #22	IAH1 (ENSRROG00000034099) #23	ENSRROG00000036140	ADAM17 (ENSRROG00000038460) #24	ENSRROG00000025134	YWHAQ (ENSRROG00000044691) #25	TAF1B (ENSRROG00000024712) #27	GRHL1 (ENSRROG00000028348) #28	KLF11 (ENSRROG00000041608) #29	RRM2 (ENSRROG00000041328) #30	HPCAL1 (ENSRROG00000033182) #31	ENSRROG00000045795 #32	NOL10 (ENSRROG00000043208) #33	ENSRROG00000029320	ATP6V1C2 (ENSRROG00000039206) #34	PDIA6 (ENSRROG00000040359) #35
Black snub-nosed monkey	MODERN SPECIES	147										ID2 (ENSRBIG00000044689)	KIDINS220 (ENSRBIG00000035069)	MBOAT2 (ENSRBIG00000035711)	ASAP2 (ENSRBIG00000035134) #19	ENSRBIG00000034346	ENSRBIG00000039204 #21	CPSF3 (ENSRBIG00000041615) #22	IAH1 (ENSRBIG00000029112) #23	ADAM17 (ENSRBIG00000031143) #24	ENSRBIG00000023329	YWHAQ (ENSRBIG00000023381) #25	TAF1B (ENSRBIG00000028101) #27	GRHL1 (ENSRBIG00000024539) #28	KLF11 (ENSRBIG00000037952) #29	RRM2 (ENSRBIG00000033258) #30	HPCAL1 (ENSRBIG00000034017) #31	ENSRBIG00000000544 #32	NOL10 (ENSRBIG00000043507) #33	ATP6V1C2 (ENSRBIG00000031961) #34	ENSRBIG00000035043	PDIA6 (ENSRBIG00000031454) #35	KCNF1 (ENSRBIG00000044334)
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.y.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Cebidae	ANCESTRAL SPECIES	40	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.y.a.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000015789.c.b	ENSGT00940000155623 #19	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a.y.a.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213
Capuchin	MODERN SPECIES	1											ID2 (ENSCCAG00000034943)	KIDINS220 (ENSCCAG00000035619)	MBOAT2 (ENSCCAG00000028053)	ASAP2 (ENSCCAG00000033861) #19	ITGB1BP1 (ENSCCAG00000036127) #21	CPSF3 (ENSCCAG00000036730) #22	ENSCCAG00000010701	IAH1 (ENSCCAG00000034153) #23	ADAM17 (ENSCCAG00000035481) #24	ENSCCAG00000001935	YWHAQ (ENSCCAG00000031746) #25	TAF1B (ENSCCAG00000031135) #27	GRHL1 (ENSCCAG00000022259) #28	KLF11 (ENSCCAG00000026312) #29	CYS1 (ENSCCAG00000028829)	ENSCCAG00000009364 #30	HPCAL1 (ENSCCAG00000020323) #31	ODC1 (ENSCCAG00000021928) #32	NOL10 (ENSCCAG00000027373) #33	ATP6V1C2 (ENSCCAG00000034767) #34	PDIA6 (ENSCCAG00000028275) #35
Bolivian squirrel monkey	MODERN SPECIES	63						ENSSBOG00000029283	ENSSBOG00000028588	RSAD2 (ENSSBOG00000024280)	RNF144A (ENSSBOG00000019246)	ID2 (ENSSBOG00000033610)	KIDINS220 (ENSSBOG00000026153)	MBOAT2 (ENSSBOG00000034820)	ENSSBOG00000029937	ASAP2 (ENSSBOG00000021237) #19	ENSSBOG00000031545 #21	CPSF3 (ENSSBOG00000027263) #22	IAH1 (ENSSBOG00000019617) #23	ADAM17 (ENSSBOG00000035331) #24	ENSSBOG00000033831 ##25	TAF1B (ENSSBOG00000028943) #27	GRHL1 (ENSSBOG00000011486) #28	KLF11 (ENSSBOG00000018899) #29	ENSSBOG00000022360 #30	HPCAL1 (ENSSBOG00000026513) #31	ODC1 (ENSSBOG00000034688) #32	NOL10 (ENSSBOG00000025651) #33	ATP6V1C2 (ENSSBOG00000020727) #34	PDIA6 (ENSSBOG00000016573) #35	KCNF1 (ENSSBOG00000032364)	C2orf50 (ENSSBOG00000027050)	SLC66A3 (ENSSBOG00000021893) #37
Marmoset	MODERN SPECIES	5	ENSCJAG00000016462	COLEC11 (ENSCJAG00000016457)	ENSCJAG00000065738	ENSCJAG00000078912	DCDC2C (ENSCJAG00000083758)	SOX11 (ENSCJAG00000038240)	CMPK2 (ENSCJAG00000085281)	RSAD2 (ENSCJAG00000010219)	RNF144A (ENSCJAG00000010225)	ENSCJAG00000006037	KIDINS220 (ENSCJAG00000006054)	ENSCJAG00000053616	MBOAT2 (ENSCJAG00000006207)	ASAP2 (ENSCJAG00000006233) #19	ENSCJAG00000006250 #21	CPSF3 (ENSCJAG00000006276) #22	IAH1 (ENSCJAG00000006360) #23	ADAM17 (ENSCJAG00000006369) #24	ENSCJAG00000062528	YWHAQ (ENSCJAG00000040849) ##25	TAF1B (ENSCJAG00000006420) #27	GRHL1 (ENSCJAG00000006431) #28	KLF11 (ENSCJAG00000046813) #29	ENSCJAG00000006533 #30	HPCAL1 (ENSCJAG00000041528) #31	ODC1 (ENSCJAG00000006576) #32	NOL10 (ENSCJAG00000006602) #33	ATP6V1C2 (ENSCJAG00000006660) #34	PDIA6 (ENSCJAG00000006694) #35	KCNF1 (ENSCJAG00000022930)	C2orf50 (ENSCJAG00000079383)
Mas night monkey	MODERN SPECIES	1339										ID2 (ENSANAG00000035588)	KIDINS220 (ENSANAG00000038069)	MBOAT2 (ENSANAG00000037506)	ENSANAG00000030828	ASAP2 (ENSANAG00000023907) #19	ENSANAG00000034926 #21	CPSF3 (ENSANAG00000031254) #22	IAH1 (ENSANAG00000033141) #23	ENSANAG00000022015	ADAM17 (ENSANAG00000037496) #24	YWHAQ (ENSANAG00000026145) ##25	TAF1B (ENSANAG00000031526) #27	GRHL1 (ENSANAG00000025191) #28	KLF11 (ENSANAG00000028728) #29	ENSANAG00000025761 #30	HPCAL1 (ENSANAG00000033383) #31	ODC1 (ENSANAG00000036668) #32	NOL10 (ENSANAG00000024937) #33	ENSANAG00000027269 #34	PDIA6 (ENSANAG00000012637) #35	KCNF1 (ENSANAG00000036777)	C2orf50 (ENSANAG00000036655)
Tarsier	MODERN SPECIES	6758													ENSTSYG00000028357	ASAP2 (ENSTSYG00000014529) #19	ITGB1BP1 (ENSTSYG00000014537) #21	CPSF3 (ENSTSYG00000002967) #22	IAH1 (ENSTSYG00000026191) #23	ADAM17 (ENSTSYG00000008904) #24	YWHAQ (ENSTSYG00000031132) #25
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Bushbaby	MODERN SPECIES	137									ID2 (ENSOGAG00000012565)	KIDINS220 (ENSOGAG00000012566)	MBOAT2 (ENSOGAG00000034475)	ENSOGAG00000034565	ENSOGAG00000034773	ASAP2 (ENSOGAG00000001677) #19	ITGB1BP1 (ENSOGAG00000001679) #21	CPSF3 (ENSOGAG00000001680) #22	IAH1 (ENSOGAG00000000544) #23	ADAM17 (ENSOGAG00000000546) #24	YWHAQ (ENSOGAG00000000547) #25	TAF1B (ENSOGAG00000014337) #27	GRHL1 (ENSOGAG00000014342) #28	KLF11 (ENSOGAG00000026035) #29	ENSOGAG00000028490	RRM2 (ENSOGAG00000007075) #30	HPCAL1 (ENSOGAG00000001557) #31	ENSOGAG00000001558 #32	ENSOGAG00000033625	NOL10 (ENSOGAG00000010494) #33	ATP6V1C2 (ENSOGAG00000009748) #34	PDIA6 (ENSOGAG00000009751) #35	ENSOGAG00000033741
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.e.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Mouse lemur	MODERN SPECIES	30	COLEC11 (ENSMICG00000037566)	ALLC (ENSMICG00000016182)	DCDC2C (ENSMICG00000044531)	ENSMICG00000032327	ENSMICG00000041516	SOX11 (ENSMICG00000026777)	ENSMICG00000038260	CMPK2 (ENSMICG00000035731)	RSAD2 (ENSMICG00000000161)	RNF144A (ENSMICG00000006187)	ID2 (ENSMICG00000033026)	KIDINS220 (ENSMICG00000010065)	MBOAT2 (ENSMICG00000010098)	ASAP2 (ENSMICG00000002345) #19	ITGB1BP1 (ENSMICG00000002359) #21	CPSF3 (ENSMICG00000002363) #22	IAH1 (ENSMICG00000002377) #23	ADAM17 (ENSMICG00000002380) #24	YWHAQ (ENSMICG00000000973) #25	ENSMICG00000045104	SLC66A3 (ENSMICG00000043387) #37	TAF1B (ENSMICG00000012714) #27	GRHL1 (ENSMICG00000012737) #28	KLF11 (ENSMICG00000012761) #29	CYS1 (ENSMICG00000027772)	ENSMICG00000012789 #30	HPCAL1 (ENSMICG00000029256) #31	ENSMICG00000012511 #32	NOL10 (ENSMICG00000004805) #33	ATP6V1C2 (ENSMICG00000017366) #34	ENSMICG00000017368 #35
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.e.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Coquerels sifaka	MODERN SPECIES	178						SOX11 (ENSPCOG00000027861)	CMPK2 (ENSPCOG00000026777)	RSAD2 (ENSPCOG00000009941)	RNF144A (ENSPCOG00000022449)	ID2 (ENSPCOG00000027288)	KIDINS220 (ENSPCOG00000004733)	ENSPCOG00000021299	MBOAT2 (ENSPCOG00000009724)	ASAP2 (ENSPCOG00000019755) #19	ENSPCOG00000023364 #21	CPSF3 (ENSPCOG00000023016) #22	IAH1 (ENSPCOG00000023355) #23	ADAM17 (ENSPCOG00000027775) #24	ENSPCOG00000023761	YWHAQ (ENSPCOG00000027184) #25
Greater bamboo lemur	MODERN SPECIES	430					ALLC (ENSPSMG00000020625)	DCDC2C (ENSPSMG00000020594)	SOX11 (ENSPSMG00000020583)	CMPK2 (ENSPSMG00000020579)	RNF144A (ENSPSMG00000020570)	ENSPSMG00000020553	ID2 (ENSPSMG00000020546)	KIDINS220 (ENSPSMG00000020495)	MBOAT2 (ENSPSMG00000020319)	ASAP2 (ENSPSMG00000020266) #19	ENSPSMG00000020223 #21	CPSF3 (ENSPSMG00000020174) #22	IAH1 (ENSPSMG00000020104) #23	ADAM17 (ENSPSMG00000020083) #24	YWHAQ (ENSPSMG00000020036) #25	TAF1B (ENSPSMG00000019984) #27	GRHL1 (ENSPSMG00000019897) #28	KLF11 (ENSPSMG00000019846) #29	CYS1 (ENSPSMG00000019836)	RRM2 (ENSPSMG00000019823) #30	HPCAL1 (ENSPSMG00000019803) #31	ODC1 (ENSPSMG00000019773) #32	ENSPSMG00000019736	ENSPSMG00000019726
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Eulipotyphla	ANCESTRAL SPECIES	387																ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24
Hedgehog	MODERN SPECIES	4693														ASAP2 (ENSEEUG00000015225) #19	ITGB1BP1 (ENSEEUG00000015370) #21	CPSF3 (ENSEEUG00000015422) #22
Common shrew	MODERN SPECIES	3631																CPSF3 (ENSSARG00000005186) #22	IAH1 (ENSSARG00000005263) #23	ENSSARG00000005278 #24
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Suina	ANCESTRAL SPECIES	13	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Chacoan peccary	MODERN SPECIES	775	TRAPPC12 (ENSCWAG00000009065)	ADI1 (ENSCWAG00000009097)	RNASEH1 (ENSCWAG00000009165)	RPS7 (ENSCWAG00000009286)	COLEC11 (ENSCWAG00000009361)	DCDC2C (ENSCWAG00000009777)	SOX11 (ENSCWAG00000009865)	CMPK2 (ENSCWAG00000009912)	RSAD2 (ENSCWAG00000009959)	RNF144A (ENSCWAG00000010020)	ID2 (ENSCWAG00000010057)	KIDINS220 (ENSCWAG00000010112)	MBOAT2 (ENSCWAG00000010541)	ASAP2 (ENSCWAG00000010606) #19	ITGB1BP1 (ENSCWAG00000010974) #21	CPSF3 (ENSCWAG00000011057) #22	IAH1 (ENSCWAG00000011129) #23	ADAM17 (ENSCWAG00000011306) #24	YWHAQ (ENSCWAG00000011406) #25	TAF1B (ENSCWAG00000011471) #27	GRHL1 (ENSCWAG00000011623) #28	KLF11 (ENSCWAG00000011855) #29	CYS1 (ENSCWAG00000012002)	RRM2 (ENSCWAG00000012081) #30	HPCAL1 (ENSCWAG00000012123) #31	ODC1 (ENSCWAG00000012155) #32	NOL10 (ENSCWAG00000012218) #33	ATP6V1C2 (ENSCWAG00000012466) #34	PDIA6 (ENSCWAG00000013173) #35	KCNF1 (ENSCWAG00000013309)	C2orf50 (ENSCWAG00000013327)
Pig	MODERN SPECIES	11	ADI1 (ENSSSCG00000029161)	RNASEH1 (ENSSSCG00000025305)	ENSSSCG00000031088	COLEC11 (ENSSSCG00000025629)	DCDC2C (ENSSSCG00000008651)	SOX11 (ENSSSCG00000008649)	ENSSSCG00000047407	CMPK2 (ENSSSCG00000008647)	RSAD2 (ENSSSCG00000008648)	RNF144A (ENSSSCG00000008646)	ID2 (ENSSSCG00000008645)	KIDINS220 (ENSSSCG00000008644)	MBOAT2 (ENSSSCG00000023539)	ASAP2 (ENSSSCG00000008642) #19	ITGB1BP1 (ENSSSCG00000029313) #21	CPSF3 (ENSSSCG00000020799) #22	IAH1 (ENSSSCG00000008640) #23	ADAM17 (ENSSSCG00000008641) #24	YWHAQ (ENSSSCG00000008638) ##25	TAF1B (ENSSSCG00000008637) #27	GRHL1 (ENSSSCG00000026068) #28	KLF11 (ENSSSCG00000038643) #29	CYS1 (ENSSSCG00000040267)	ENSSSCG00000031741 #30	HPCAL1 (ENSSSCG00000003663) #31	ODC1 (ENSSSCG00000027121) #32	NOL10 (ENSSSCG00000008635) #33	ATP6V1C2 (ENSSSCG00000008634) #34	PDIA6 (ENSSSCG00000008633) #35	KCNF1 (ENSSSCG00000033463)	SLC66A3 (ENSSSCG00000008631) #37
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000155671 #16	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000154459.B	ENSGT00940000153916.B #37	ENSGT01030000234517.D
Alpaca	MODERN SPECIES	64																CPSF3 (ENSVPAG00000008041) #22	IAH1 (ENSVPAG00000008044) #23	ADAM17 (ENSVPAG00000008045) #24	YWHAQ (ENSVPAG00000008047) #25
Arabian camel	MODERN SPECIES	6	ENSCDRG00005014339 #16	EIPR1 (ENSCDRG00005014386)	TRAPPC12 (ENSCDRG00005014434)	ADI1 (ENSCDRG00005014498)	ENSCDRG00005014654	COLEC11 (ENSCDRG00005014714)	ALLC (ENSCDRG00005014851)	CMPK2 (ENSCDRG00005015247)	RSAD2 (ENSCDRG00005015263)	RNF144A (ENSCDRG00005015339)	ID2 (ENSCDRG00005015367)	KIDINS220 (ENSCDRG00005015440)	MBOAT2 (ENSCDRG00005016283)	ASAP2 (ENSCDRG00005016761) #19	ITGB1BP1 (ENSCDRG00005021375) #21	CPSF3 (ENSCDRG00005021386) #22	IAH1 (ENSCDRG00005021394) #23	ADAM17 (ENSCDRG00005021400) #24	YWHAQ (ENSCDRG00005021407) #25	ENSCDRG00005021412	TAF1B (ENSCDRG00005021414) #27	GRHL1 (ENSCDRG00005021421) #28	KLF11 (ENSCDRG00005021426) #29	RRM2 (ENSCDRG00005021436) #30	HPCAL1 (ENSCDRG00005021441) #31	ODC1 (ENSCDRG00005021445) #32	NOL10 (ENSCDRG00005021454) #33	ATP6V1C2 (ENSCDRG00005021467) #34	PDIA6 (ENSCDRG00005021479) #35	C2orf50 (ENSCDRG00005003354)	SLC66A3 (ENSCDRG00005003399) #37
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Cetacea	ANCESTRAL SPECIES	16	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000155671 #16	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d.b	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37
Narwhal	MODERN SPECIES	305	MYT1L (ENSMMNG00015008281) #16	EIPR1 (ENSMMNG00015008117)	TRAPPC12 (ENSMMNG00015008082)	ADI1 (ENSMMNG00015008063)	RNASEH1 (ENSMMNG00015008036)	ENSMMNG00015008005	COLEC11 (ENSMMNG00015007976)	ENSMMNG00015007954	SOX11 (ENSMMNG00015007940)	RNF144A (ENSMMNG00015007925)	ID2 (ENSMMNG00015007903)	KIDINS220 (ENSMMNG00015007796)	MBOAT2 (ENSMMNG00015007697)	ASAP2 (ENSMMNG00015007585) #19	ITGB1BP1 (ENSMMNG00015007476) #21	CPSF3 (ENSMMNG00015007400) #22	IAH1 (ENSMMNG00015007332) #23	ADAM17 (ENSMMNG00015007247) #24	YWHAQ (ENSMMNG00015007193) #25	TAF1B (ENSMMNG00015007142) #27	GRHL1 (ENSMMNG00015007097) #28	KLF11 (ENSMMNG00015007075) #29	CYS1 (ENSMMNG00015007058)	ENSMMNG00015007031 #30	HPCAL1 (ENSMMNG00015007009) #31	ENSMMNG00015006983 #32	NOL10 (ENSMMNG00015006937) #33	ATP6V1C2 (ENSMMNG00015006876) #34	PDIA6 (ENSMMNG00015006773) #35	KCNF1 (ENSMMNG00015006742)	SLC66A3 (ENSMMNG00015006697) #37
Beluga whale	MODERN SPECIES	37									ENSDLEG00000004773	RNF144A (ENSDLEG00000004760)	ID2 (ENSDLEG00000004751)	KIDINS220 (ENSDLEG00000004637)	MBOAT2 (ENSDLEG00000004585)	ASAP2 (ENSDLEG00000004523) #19	ITGB1BP1 (ENSDLEG00000004511) #21	CPSF3 (ENSDLEG00000004493) #22	IAH1 (ENSDLEG00000004484) #23	ENSDLEG00000004471	ADAM17 (ENSDLEG00000004858) #24	YWHAQ (ENSDLEG00000004846) #25	TAF1B (ENSDLEG00000004806) #27	GRHL1 (ENSDLEG00000004790) #28	KLF11 (ENSDLEG00000004778) #29	CYS1 (ENSDLEG00000004756)	ENSDLEG00000004724 #30	HPCAL1 (ENSDLEG00000004713) #31	ODC1 (ENSDLEG00000004685) #32	NOL10 (ENSDLEG00000004668) #33	ATP6V1C2 (ENSDLEG00000004632) #34	PDIA6 (ENSDLEG00000004606) #35	KCNF1 (ENSDLEG00000004602)
Vaquita	MODERN SPECIES	4	TRAPPC12 (ENSPSNG00000022403)	ENSPSNG00000022415	RNASEH1 (ENSPSNG00000022419)	ENSPSNG00000022424	COLEC11 (ENSPSNG00000022428)	DCDC2C (ENSPSNG00000022437)	SOX11 (ENSPSNG00000022450)	CMPK2 (ENSPSNG00000022458)	RSAD2 (ENSPSNG00000022461)	RNF144A (ENSPSNG00000022468)	ID2 (ENSPSNG00000022474)	KIDINS220 (ENSPSNG00000022485)	MBOAT2 (ENSPSNG00000022501)	ASAP2 (ENSPSNG00000022513) #19	ENSPSNG00000022534 #21	CPSF3 (ENSPSNG00000022538) #22	IAH1 (ENSPSNG00000022542) #23	ADAM17 (ENSPSNG00000022548) #24	YWHAQ (ENSPSNG00000022551) #25	TAF1B (ENSPSNG00000022554) #27	GRHL1 (ENSPSNG00000022556) #28	KLF11 (ENSPSNG00000022558) #29	CYS1 (ENSPSNG00000022560)	ENSPSNG00000022562 #30	HPCAL1 (ENSPSNG00000022565) #31	ENSPSNG00000022567 #32	NOL10 (ENSPSNG00000022572) #33	ATP6V1C2 (ENSPSNG00000022577) #34	PDIA6 (ENSPSNG00000022580) #35	KCNF1 (ENSPSNG00000022584)	SLC66A3 (ENSPSNG00000004284) #37
Dolphin	MODERN SPECIES	1074														ASAP2 (ENSTTRG00000000856) #19	ITGB1BP1 (ENSTTRG00000000859) #21	CPSF3 (ENSTTRG00000000861) #22	IAH1 (ENSTTRG00000000865) #23	ADAM17 (ENSTTRG00000000868) #24	YWHAQ (ENSTTRG00000000871) #25
Sperm whale	MODERN SPECIES	3	EIPR1 (ENSPCTG00005010312)	TRAPPC12 (ENSPCTG00005010367)	ADI1 (ENSPCTG00005010460)	RNASEH1 (ENSPCTG00005010508)	RPS7 (ENSPCTG00005010552)	COLEC11 (ENSPCTG00005010632)	ENSPCTG00005010966	CMPK2 (ENSPCTG00005011012)	RSAD2 (ENSPCTG00005011072)	RNF144A (ENSPCTG00005011143)	KIDINS220 (ENSPCTG00005011195)	MBOAT2 (ENSPCTG00005011265)	ASAP2 (ENSPCTG00005011387) #19	ENSPCTG00005011590	ENSPCTG00005011637 #21	CPSF3 (ENSPCTG00005011872) #22	IAH1 (ENSPCTG00005012450) #23	ADAM17 (ENSPCTG00005012570) #24	ENSPCTG00005012664	YWHAQ (ENSPCTG00005012710) #25	TAF1B (ENSPCTG00005012791) #27	ENSPCTG00005012849 #28	RRM2 (ENSPCTG00005012888) #30	HPCAL1 (ENSPCTG00005012942) #31	ODC1 (ENSPCTG00005012986) #32	NOL10 (ENSPCTG00005013060) #33	ATP6V1C2 (ENSPCTG00005013317) #34	PDIA6 (ENSPCTG00005013450) #35	KCNF1 (ENSPCTG00005013707)	PQLC3 (ENSPCTG00005013870) #37	ROCK2 (ENSPCTG00005014000)
Blue whale	MODERN SPECIES	4	ENSBMSG00010013971	ENSBMSG00010013937	ENSBMSG00010013901	RNASEH1 (ENSBMSG00010013874)	RPS7 (ENSBMSG00010019975)	COLEC11 (ENSBMSG00010019717)	DCDC2C (ENSBMSG00010019611)	CMPK2 (ENSBMSG00010019458)	RSAD2 (ENSBMSG00010019426)	RNF144A (ENSBMSG00010019394)	ID2 (ENSBMSG00010019337)	KIDINS220 (ENSBMSG00010019274)	MBOAT2 (ENSBMSG00010019136)	ASAP2 (ENSBMSG00010019066) #19	ENSBMSG00010019013 #21	CPSF3 (ENSBMSG00010018925) #22	ENSBMSG00010018884 #23	ADAM17 (ENSBMSG00010018804) #24	YWHAQ (ENSBMSG00010018734) #25	ENSBMSG00010018704	TAF1B (ENSBMSG00010018671) #27	ENSBMSG00010018631 #28	ENSBMSG00010018599 #28	KLF11 (ENSBMSG00010018472) #29	CYS1 (ENSBMSG00010018428)	RRM2 (ENSBMSG00010018407) #30	ENSBMSG00010018397	HPCAL1 (ENSBMSG00010018376) #31	ENSBMSG00010018302 #32	NOL10 (ENSBMSG00010018130) #33	ATP6V1C2 (ENSBMSG00010017714) #34
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Yarkand deer	MODERN SPECIES	2	NDUFA8 (ENSCHYG00000016988)	ENSCHYG00000016926	DAB2IP (ENSCHYG00000016211)	ENSCHYG00000016003	ENSCHYG00000015664	ENSCHYG00000015614	CMPK2 (ENSCHYG00000015445)	RSAD2 (ENSCHYG00000015364)	RNF144A (ENSCHYG00000015190)	ID2 (ENSCHYG00000015082)	KIDINS220 (ENSCHYG00000013747)	MBOAT2 (ENSCHYG00000013496)	ENSCHYG00000013479	ASAP2 (ENSCHYG00000012499) #19	ENSCHYG00000012310 #21	CPSF3 (ENSCHYG00000012112) #22	IAH1 (ENSCHYG00000012019) #23	ADAM17 (ENSCHYG00000011771) #24	YWHAQ (ENSCHYG00000011701) #25	ENSCHYG00000011680	TAF1B (ENSCHYG00000011467) #27	GRHL1 (ENSCHYG00000011321) #28	KLF11 (ENSCHYG00000011297) #29	ENSCHYG00000011258 #30	ENSCHYG00000011216	HPCAL1 (ENSCHYG00000011179) #31	ENSCHYG00000011027 #32	NOL10 (ENSCHYG00000010137) #33	ATP6V1C2 (ENSCHYG00000009711) #34	PDIA6 (ENSCHYG00000009406) #35	KCNF1 (ENSCHYG00000009374)
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Siberian musk deer	MODERN SPECIES	238	NDUFA8 (ENSMMSG00000003353)	TTLL11 (ENSMMSG00000003370)	DAB2IP (ENSMMSG00000003463)	ENSMMSG00000003726	ENSMMSG00000003739	ENSMMSG00000003765	ENSMMSG00000003776	CMPK2 (ENSMMSG00000003809)	RSAD2 (ENSMMSG00000003822)	RNF144A (ENSMMSG00000003832)	ID2 (ENSMMSG00000003856)	KIDINS220 (ENSMMSG00000003882)	MBOAT2 (ENSMMSG00000003927)	ASAP2 (ENSMMSG00000000274) #19	ENSMMSG00000000578 #21	CPSF3 (ENSMMSG00000000621) #22	ENSMMSG00000000723 #23	ADAM17 (ENSMMSG00000000759) #24	YWHAQ (ENSMMSG00000000770) #25	TAF1B (ENSMMSG00000000824) #27	GRHL1 (ENSMMSG00000000910) #28	KLF11 (ENSMMSG00000001004) #29	CYS1 (ENSMMSG00000001021)	ENSMMSG00000001037 #30	HPCAL1 (ENSMMSG00000001078) #31	ENSMMSG00000001108 #32	NOL10 (ENSMMSG00000001168) #33	ATP6V1C2 (ENSMMSG00000001335) #34	ENSMMSG00000001405	PDIA6 (ENSMMSG00000001421) #35	KCNF1 (ENSMMSG00000001477)
Bovidae	ANCESTRAL SPECIES	5	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Bos	ANCESTRAL SPECIES	5	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Bos_a	ANCESTRAL SPECIES	6							ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Domestic yak	MODERN SPECIES	28						SOX11 (ENSBGRG00000015914)	CMPK2 (ENSBGRG00000015652)	RSAD2 (ENSBGRG00000015611)	RNF144A (ENSBGRG00000015479)	ID2 (ENSBGRG00000015396)	ENSBGRG00000015325	KIDINS220 (ENSBGRG00000014341)	MBOAT2 (ENSBGRG00000014129)	ASAP2 (ENSBGRG00000013865) #19	ITGB1BP1 (ENSBGRG00000013746) #21	CPSF3 (ENSBGRG00000013338) #22	IAH1 (ENSBGRG00000013251) #23	ADAM17 (ENSBGRG00000012923) #24	YWHAQ (ENSBGRG00000012872) #25	ENSBGRG00000012819 ##25	ENSBGRG00000012787	TAF1B (ENSBGRG00000012581) #27	GRHL1 (ENSBGRG00000011381) #28	ENSBGRG00000011303	KLF11 (ENSBGRG00000011215) #29	CYS1 (ENSBGRG00000011167)	RRM2 (ENSBGRG00000010858) #30	HPCAL1 (ENSBGRG00000010770) #31	ENSBGRG00000010591 #32	ENSBGRG00000010565	NOL10 (ENSBGRG00000024949) #33
Wild yak	MODERN SPECIES	1783										ID2 (ENSBMUG00000003840)	KIDINS220 (ENSBMUG00000003783)	MBOAT2 (ENSBMUG00000003625)	ENSBMUG00000003596	ASAP2 (ENSBMUG00000003572) #19	ITGB1BP1 (ENSBMUG00000003480) #21	CPSF3 (ENSBMUG00000003413) #22	IAH1 (ENSBMUG00000003367) #23	ADAM17 (ENSBMUG00000003344) #24	YWHAQ (ENSBMUG00000003324) #25
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Cow	MODERN SPECIES	2	DAB2IP (ENSBTAG00000008232)	GGTA1 (ENSBTAG00000012090)	ENSBTAG00000039186	ENSBTAG00000039201	SOX11 (ENSBTAG00000050114)	ENSBTAG00000051441	CMPK2 (ENSBTAG00000019979)	RSAD2 (ENSBTAG00000016061)	RNF144A (ENSBTAG00000044064)	ENSBTAG00000037793	ID2 (ENSBTAG00000021187)	KIDINS220 (ENSBTAG00000007963)	MBOAT2 (ENSBTAG00000008160)	ASAP2 (ENSBTAG00000002329) #19	ITGB1BP1 (ENSBTAG00000013063) #21	CPSF3 (ENSBTAG00000019735) #22	IAH1 (ENSBTAG00000001140) #23	ADAM17 (ENSBTAG00000001141) #24	YWHAQ (ENSBTAG00000002108) ##25	ENSBTAG00000048394	TAF1B (ENSBTAG00000007543) #27	GRHL1 (ENSBTAG00000007485) #28	KLF11 (ENSBTAG00000046218) #29	CYS1 (ENSBTAG00000052669)	RRM2 (ENSBTAG00000008216) #30	HPCAL1 (ENSBTAG00000004259) #31	ODC1 (ENSBTAG00000004256) #32	NOL10 (ENSBTAG00000002716) #33	ATP6V1C2 (ENSBTAG00000001927) #34	PDIA6 (ENSBTAG00000001928) #35	KCNF1 (ENSBTAG00000021283)
Hybrid Bos Indicus	MODERN SPECIES	2	NDUFA8 (ENSBIXG00005003287)	TTLL11 (ENSBIXG00005003298)	DAB2IP (ENSBIXG00005005534)	ENSBIXG00005020351	ENSBIXG00005020391	ENSBIXG00005020418	SOX11 (ENSBIXG00005020448)	CMPK2 (ENSBIXG00005003470)	RSAD2 (ENSBIXG00005020552)	RNF144A (ENSBIXG00005020588)	ID2 (ENSBIXG00005020723)	KIDINS220 (ENSBIXG00005021201)	MBOAT2 (ENSBIXG00005021383)	ASAP2 (ENSBIXG00005021521) #19	ITGB1BP1 (ENSBIXG00005021598) #21	CPSF3 (ENSBIXG00005003653) #22	IAH1 (ENSBIXG00005021763) #23	ADAM17 (ENSBIXG00005002613) #24	YWHAQ (ENSBIXG00005021830) #25	ENSBIXG00005021842	TAF1B (ENSBIXG00005021864) #27	GRHL1 (ENSBIXG00005003698) #28	KLF11 (ENSBIXG00005021989) #29	ENSBIXG00005003712	RRM2 (ENSBIXG00005022029) #30	HPCAL1 (ENSBIXG00005006887) #31	ENSBIXG00005022099 #32	NOL10 (ENSBIXG00005022242) #33	ENSBIXG00005022288	ENSBIXG00005007375 #34	ENSBIXG00005007689 #35
American bison	MODERN SPECIES	3221	DAB2IP (ENSBBBG00000012385)	ENSBBBG00000012306	ENSBBBG00000002314	ENSBBBG00000002313	ENSBBBG00000012273	ENSBBBG00000012270	RSAD2 (ENSBBBG00000012264)	RNF144A (ENSBBBG00000007447)	ID2 (ENSBBBG00000012256)	KIDINS220 (ENSBBBG00000012237)	ENSBBBG00000012162	MBOAT2 (ENSBBBG00000012157)	ASAP2 (ENSBBBG00000012138) #19	ENSBBBG00000012059	ITGB1BP1 (ENSBBBG00000012050) #21	CPSF3 (ENSBBBG00000012019) #22	IAH1 (ENSBBBG00000008101) #23	ADAM17 (ENSBBBG00000002244) #24	YWHAQ (ENSBBBG00000011974) #25	TAF1B (ENSBBBG00000011961) #27	GRHL1 (ENSBBBG00000011949) #28	KLF11 (ENSBBBG00000011923) #29	RRM2 (ENSBBBG00000011911) #30	HPCAL1 (ENSBBBG00000007122) #31	ODC1 (ENSBBBG00000011893) #32	NOL10 (ENSBBBG00000002209) #33	ATP6V1C2 (ENSBBBG00000011779) #34	ENSBBBG00000011729 #35	ENSBBBG00000011712	KCNF1 (ENSBBBG00000002161)	C2orf50 (ENSBBBG00000011703)
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000155699.c #22
Goat	MODERN SPECIES	22	FNDC7 (ENSCHIG00000018554)	ENSCHIG00000024357	HENMT1 (ENSCHIG00000013249)	EEIG2 (ENSCHIG00000018010)	ENSCHIG00000012399	ENSCHIG00000000620	SLC25A24 (ENSCHIG00000023537)	VAV3 (ENSCHIG00000016068)	ENSCHIG00000009992	NTNG1 (ENSCHIG00000020049)	PRMT6 (ENSCHIG00000006399)	ENSCHIG00000016071	ENSCHIG00000021505	ENSCHIG00000025322	ENSCHIG00000013913	ENSCHIG00000009354 #22	ENSCHIG00000025530	ENSCHIG00000015030	RNPC3 (ENSCHIG00000020361)	COL11A1 (ENSCHIG00000012424)	ENSCHIG00000017064 #21	OLFM3 (ENSCHIG00000008401)	S1PR1 (ENSCHIG00000008675)	DPH5 (ENSCHIG00000022866)	SLC30A7 (ENSCHIG00000008776)	EXTL2 (ENSCHIG00000016039)	ENSCHIG00000021886	ENSCHIG00000011792	ENSCHIG00000009839	GPR88 (ENSCHIG00000003315)	CDC14A (ENSCHIG00000014573)
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000154706.ib	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464.a	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990.k #21	ENSGT00940000155699.d #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020014819	DAB2IP (ENSOARG00020014930)	ENSOARG00020015864	ENSOARG00020016051	ENSOARG00020016131	ENSOARG00020006554	ENSOARG00020006589	CMPK2 (ENSOARG00020006720)	ENSOARG00020006787	RNF144A (ENSOARG00020006856)	ID2 (ENSOARG00020006940)	KIDINS220 (ENSOARG00020007030)	MBOAT2 (ENSOARG00020007653)	ASAP2 (ENSOARG00020007758) #19	ITGB1BP1 (ENSOARG00020008178) #21	CPSF3 (ENSOARG00020008301) #22	IAH1 (ENSOARG00020008401) #23	ADAM17 (ENSOARG00020008512) #24	YWHAQ (ENSOARG00020008682) #25	TAF1B (ENSOARG00020008727) #27	GRHL1 (ENSOARG00020008773) #28	KLF11 (ENSOARG00020008965) #29	CYS1 (ENSOARG00020009035)	ENSOARG00020009097 #30	HPCAL1 (ENSOARG00020009151) #31	ODC1 (ENSOARG00020009225) #32	NOL10 (ENSOARG00020009305) #33	ATP6V1C2 (ENSOARG00020009600) #34	PDIA6 (ENSOARG00020009823) #35	KCNF1 (ENSOARG00020010045)	C2orf50 (ENSOARG00020010067)
Goat	MODERN SPECIES	2	ENSCHIG00000023562	ENSCHIG00000009248	ENSCHIG00000023895	ENSCHIG00000021333	ENSCHIG00000014881	SOX11 (ENSCHIG00000024868)	CMPK2 (ENSCHIG00000012790)	RSAD2 (ENSCHIG00000021832)	RNF144A (ENSCHIG00000016336)	ENSCHIG00000018361	KIDINS220 (ENSCHIG00000026710)	MBOAT2 (ENSCHIG00000026251)	ENSCHIG00000012410	ASAP2 (ENSCHIG00000022796) #19	ENSCHIG00000020028 #21	CPSF3 (ENSCHIG00000013973) #22	IAH1 (ENSCHIG00000016467) #23	ADAM17 (ENSCHIG00000013595) #24	YWHAQ (ENSCHIG00000012589) #25	ENSCHIG00000012158	TAF1B (ENSCHIG00000013783) #27	ENSCHIG00000026755 #28	KLF11 (ENSCHIG00000011294) #29	CYS1 (ENSCHIG00000018115)	ENSCHIG00000004531	RRM2 (ENSCHIG00000009694) #30	HPCAL1 (ENSCHIG00000019475) #31	ENSCHIG00000027003 #32	NOL10 (ENSCHIG00000012935) #33	ATP6V1C2 (ENSCHIG00000017272) #34	PDIA6 (ENSCHIG00000007838) #35
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Carnivora	ANCESTRAL SPECIES	19	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Caniformia	ANCESTRAL SPECIES	18	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Ursidae	ANCESTRAL SPECIES	9	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000012138.a.a.j.s	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Ursus	ANCESTRAL SPECIES	125	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00390000012138.a.a.j.s.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Polar bear	MODERN SPECIES	89	RNASEH1 (ENSUMAG00000003941)	RPS7 (ENSUMAG00000003937)	COLEC11 (ENSUMAG00000003933)	ALLC (ENSUMAG00000003926)	ENSUMAG00000003916	ENSUMAG00000003909	ENSUMAG00000003902	RSAD2 (ENSUMAG00000003893)	RNF144A (ENSUMAG00000003876)	ID2 (ENSUMAG00000003840)	KIDINS220 (ENSUMAG00000003833)	MBOAT2 (ENSUMAG00000003744)	ENSUMAG00000003713	ASAP2 (ENSUMAG00000003695) #19	ITGB1BP1 (ENSUMAG00000003689) #21	CPSF3 (ENSUMAG00000003676) #22	ENSUMAG00000003666 #23	ENSUMAG00000003662 #23	ADAM17 (ENSUMAG00000003653) #24	YWHAQ (ENSUMAG00000003646) #25	TAF1B (ENSUMAG00000003559) #27	GRHL1 (ENSUMAG00000003494) #28	KLF11 (ENSUMAG00000003481) #29	RRM2 (ENSUMAG00000003431) #30	HPCAL1 (ENSUMAG00000003415) #31	ODC1 (ENSUMAG00000003406) #32	NOL10 (ENSUMAG00000003385) #33	ATP6V1C2 (ENSUMAG00000003318) #34	PDIA6 (ENSUMAG00000003308) #35	KCNF1 (ENSUMAG00000003301)	C2orf50 (ENSUMAG00000003297)
American black bear	MODERN SPECIES	1136													ENSUAMG00000007716	ASAP2 (ENSUAMG00000007571) #19	ITGB1BP1 (ENSUAMG00000007538) #21	CPSF3 (ENSUAMG00000007535) #22	IAH1 (ENSUAMG00000007531) #23	ADAM17 (ENSUAMG00000007528) #24	ENSUAMG00000007526 ##25
Giant Panda	MODERN SPECIES	14	ADI1 (ENSAMEG00000018432)	RNASEH1 (ENSAMEG00000018433)	RPS7 (ENSAMEG00000018435)	ALLC (ENSAMEG00000018438)	ENSAMEG00000026778	SOX11 (ENSAMEG00000013354)	CMPK2 (ENSAMEG00000013345)	RSAD2 (ENSAMEG00000013333)	RNF144A (ENSAMEG00000013324)	ID2 (ENSAMEG00000026711)	KIDINS220 (ENSAMEG00000008328)	MBOAT2 (ENSAMEG00000008373)	ENSAMEG00000024246	ASAP2 (ENSAMEG00000008406) #19	ITGB1BP1 (ENSAMEG00000008478) #21	CPSF3 (ENSAMEG00000008493) #22	IAH1 (ENSAMEG00000008545) #23	ADAM17 (ENSAMEG00000008569) #24	YWHAQ (ENSAMEG00000008618) #25	TAF1B (ENSAMEG00000011301) #27	GRHL1 (ENSAMEG00000011320) #28	KLF11 (ENSAMEG00000011355) #29	RRM2 (ENSAMEG00000011372) #30	HPCAL1 (ENSAMEG00000029791) #31	ODC1 (ENSAMEG00000011415) #32	NOL10 (ENSAMEG00000011438) #33	ATP6V1C2 (ENSAMEG00000011506) #34	ENSAMEG00000011555 #35	KCNF1 (ENSAMEG00000019267)	C2orf50 (ENSAMEG00000011580)	SLC66A3 (ENSAMEG00000011583) #37
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00390000003466	ENSGT00390000014122.i.b.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00990000204082	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Ferret	MODERN SPECIES	178	ENSMPUG00000013120	ENSMPUG00000019478	ENSMPUG00000013122	ENSMPUG00000013127	ENSMPUG00000019479	CMPK2 (ENSMPUG00000013134)	RSAD2 (ENSMPUG00000013146)	RNF144A (ENSMPUG00000013154)	ENSMPUG00000013172	ENSMPUG00000013173	ID2 (ENSMPUG00000013178)	KIDINS220 (ENSMPUG00000013181)	MBOAT2 (ENSMPUG00000013191)	ASAP2 (ENSMPUG00000013197) #19	ITGB1BP1 (ENSMPUG00000013210) #21	CPSF3 (ENSMPUG00000013213) #22	IAH1 (ENSMPUG00000013218) #23	ADAM17 (ENSMPUG00000013236) #24	ENSMPUG00000013249	YWHAQ (ENSMPUG00000013252) #25	TAF1B (ENSMPUG00000013256) #27	GRHL1 (ENSMPUG00000013263) #28	ENSMPUG00000013277	ENSMPUG00000013281	KLF11 (ENSMPUG00000013287) #29	RRM2 (ENSMPUG00000013295) #30	HPCAL1 (ENSMPUG00000013302) #31	ODC1 (ENSMPUG00000013321) #32	NOL10 (ENSMPUG00000013325) #33	ATP6V1C2 (ENSMPUG00000013450) #34	ENSMPUG00000019480
American mink	MODERN SPECIES	7	ADI1 (ENSNVIG00000015966)	RNASEH1 (ENSNVIG00000015913)	ENSNVIG00000015884	COLEC11 (ENSNVIG00000015826)	ALLC (ENSNVIG00000015809)	DCDC2C (ENSNVIG00000015778)	SOX11 (ENSNVIG00000015756)	ENSNVIG00000015750	RSAD2 (ENSNVIG00000015718)	R144A (ENSNVIG00000015685)	ID2 (ENSNVIG00000015663)	KIDINS220 (ENSNVIG00000015535)	MBOAT2 (ENSNVIG00000015525)	ASAP2 (ENSNVIG00000015416) #19	ITGB1BP1 (ENSNVIG00000015345) #21	CPSF3 (ENSNVIG00000015301) #22	IAH1 (ENSNVIG00000015262) #23	ADAM17 (ENSNVIG00000015197) #24	YWHAQ (ENSNVIG00000015162) #25	TAF1B (ENSNVIG00000015127) #27	GRHL1 (ENSNVIG00000015046) #28	KLF11 (ENSNVIG00000015016) #29	RRM2 (ENSNVIG00000014985) #30	ENSNVIG00000014964	DCOR (ENSNVIG00000014941) #32	NOL10 (ENSNVIG00000014778) #33	ATP6V1C2 (ENSNVIG00000014715) #34	PDIA6 (ENSNVIG00000014505) #35	KCNF1 (ENSNVIG00000014487)	C2orf50 (ENSNVIG00000014464)	SLC66A3 (ENSNVIG00000014450) #37
Canidae	ANCESTRAL SPECIES	46	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j.f.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Dingo	MODERN SPECIES	223	TRAPPC12 (ENSCAFG00020005019)	ADI1 (ENSCAFG00020005017)	RNASEH1 (ENSCAFG00020004994)	COLEC11 (ENSCAFG00020004967)	ALLC (ENSCAFG00020004959)	DCDC2C (ENSCAFG00020004927)	SOX11 (ENSCAFG00020004918)	ENSCAFG00020004906	RSAD2 (ENSCAFG00020004883)	RNF144A (ENSCAFG00020004868)	ID2 (ENSCAFG00020004823)	KIDINS220 (ENSCAFG00020002173)	MBOAT2 (ENSCAFG00020001936)	ASAP2 (ENSCAFG00020000377) #19	ITGB1BP1 (ENSCAFG00020000149) #21	CPSF3 (ENSCAFG00020026799) #22	IAH1 (ENSCAFG00020026797) #23	ENSCAFG00020026796 #24	YWHAQ (ENSCAFG00020026795) #25	TAF1B (ENSCAFG00020026787) #27	GRHL1 (ENSCAFG00020026767) #28	KLF11 (ENSCAFG00020026763) #29	CYS1 (ENSCAFG00020026758)	RRM2 (ENSCAFG00020026744) #30	HPCAL1 (ENSCAFG00020026737) #31	ODC1 (ENSCAFG00020026728) #32	NOL10 (ENSCAFG00020026722) #33	ATP6V1C2 (ENSCAFG00020026718) #34	PDIA6 (ENSCAFG00020026714) #35	KCNF1 (ENSCAFG00020026713)	C2orf50 (ENSCAFG00020026711)
Dog	MODERN SPECIES	8	ADI1 (ENSCAFG00845021388)	RNASEH1 (ENSCAFG00845021474)	RPS7 (ENSCAFG00845021596)	COLEC11 (ENSCAFG00845021783)	ALLC (ENSCAFG00845021988)	DCDC2C (ENSCAFG00845022069)	SOX11 (ENSCAFG00845022195)	CMPK2 (ENSCAFG00845022277)	RSAD2 (ENSCAFG00845022316)	RNF144A (ENSCAFG00845022407)	ID2 (ENSCAFG00845022749)	KIDINS220 (ENSCAFG00845023013)	MBOAT2 (ENSCAFG00845023611)	ASAP2 (ENSCAFG00845023702) #19	ITGB1BP1 (ENSCAFG00845024064) #21	CPSF3 (ENSCAFG00845024218) #22	IAH1 (ENSCAFG00845024429) #23	ADAM17 (ENSCAFG00845024728) #24	YWHAQ (ENSCAFG00845025457) #25	TAF1B (ENSCAFG00845025510) #27	GRHL1 (ENSCAFG00845025614) #28	KLF11 (ENSCAFG00845025845) #29	CYS1 (ENSCAFG00845025907)	RRM2 (ENSCAFG00845025952) #30	HPCAL1 (ENSCAFG00845026130) #31	ODC1 (ENSCAFG00845026175) #32	NOL10 (ENSCAFG00845026340) #33	ATP6V1C2 (ENSCAFG00845026644) #34	PDIA6 (ENSCAFG00845026954) #35	KCNF1 (ENSCAFG00845027200)	C2orf50 (ENSCAFG00845027230)
Red fox	MODERN SPECIES	76	ADI1 (ENSVVUG00000008646)	RNASEH1 (ENSVVUG00000008633)	RPS7 (ENSVVUG00000008628)	COLEC11 (ENSVVUG00000008618)	ALLC (ENSVVUG00000008603)	ENSVVUG00000008582	ENSVVUG00000008555	ENSVVUG00000008545	RSAD2 (ENSVVUG00000008530)	RNF144A (ENSVVUG00000008507)	ID2 (ENSVVUG00000008464)	KIDINS220 (ENSVVUG00000003457)	MBOAT2 (ENSVVUG00000002534)	ASAP2 (ENSVVUG00000002403) #19	ITGB1BP1 (ENSVVUG00000002216) #21	CPSF3 (ENSVVUG00000002194) #22	IAH1 (ENSVVUG00000002169) #23	ADAM17 (ENSVVUG00000002136) #24	YWHAQ (ENSVVUG00000002125) #25	TAF1B (ENSVVUG00000001641) #27	GRHL1 (ENSVVUG00000001610) #28	KLF11 (ENSVVUG00000001585) #29	RRM2 (ENSVVUG00000001484) #30	HPCAL1 (ENSVVUG00000001457) #31	ODC1 (ENSVVUG00000001437) #32	ENSVVUG00000001420	NOL10 (ENSVVUG00000001394) #33	ATP6V1C2 (ENSVVUG00000001351) #34	PDIA6 (ENSVVUG00000001332) #35	KCNF1 (ENSVVUG00000001317)	CUNH2orf50 (ENSVVUG00000001296)
Felidae	ANCESTRAL SPECIES	3	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Tiger	MODERN SPECIES	581	EIPR1 (ENSPTIG00000018777)	ENSPTIG00000018854	ADI1 (ENSPTIG00000019002)	RNASEH1 (ENSPTIG00000019034)	RPS7 (ENSPTIG00000019474)	ALLC (ENSPTIG00000019525)	DCDC2C (ENSPTIG00000019551)	ENSPTIG00000019591	RSAD2 (ENSPTIG00000019625)	RNF144A (ENSPTIG00000019714)	ID2 (ENSPTIG00000019724)	KIDINS220 (ENSPTIG00000019843)	MBOAT2 (ENSPTIG00000020033)	ASAP2 (ENSPTIG00000000985) #19	ITGB1BP1 (ENSPTIG00000002156) #21	CPSF3 (ENSPTIG00000003920) #22	IAH1 (ENSPTIG00000005299) #23	ADAM17 (ENSPTIG00000005404) #24	YWHAQ (ENSPTIG00000006178) #25	TAF1B (ENSPTIG00000006228) #27	GRHL1 (ENSPTIG00000007003) #28	KLF11 (ENSPTIG00000007061) #29	RRM2 (ENSPTIG00000007390) #30	ODC1 (ENSPTIG00000007491) #32
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
lion	MODERN SPECIES	3	EIPR1 (ENSPLOG00000001791)	ENSPLOG00000001824	TRAPPC12 (ENSPLOG00000001834)	RNASEH1 (ENSPLOG00000001905)	RPS7 (ENSPLOG00000001995)	COLEC11 (ENSPLOG00000002030)	ALLC (ENSPLOG00000002071)	CMPK2 (ENSPLOG00000002115)	RSAD2 (ENSPLOG00000002128)	RNF144A (ENSPLOG00000002146)	ID2 (ENSPLOG00000002192)	KIDINS220 (ENSPLOG00000002235)	MBOAT2 (ENSPLOG00000002421)	ASAP2 (ENSPLOG00000002531) #19	ITGB1BP1 (ENSPLOG00000002692) #21	CPSF3 (ENSPLOG00000002732) #22	IAH1 (ENSPLOG00000002790) #23	ADAM17 (ENSPLOG00000002823) #24	YWHAQ (ENSPLOG00000002873) #25	ENSPLOG00000002895	TAF1B (ENSPLOG00000002921) #27	GRHL1 (ENSPLOG00000002984) #28	KLF11 (ENSPLOG00000003042) #29	CYS1 (ENSPLOG00000003056)	RRM2 (ENSPLOG00000003069) #30	HPCAL1 (ENSPLOG00000003090) #31	ODC1 (ENSPLOG00000003104) #32	NOL10 (ENSPLOG00000003174) #33	ATP6V1C2 (ENSPLOG00000003251) #34	PDIA6 (ENSPLOG00000003350) #35	KCNF1 (ENSPLOG00000003383)
leopard	MODERN SPECIES		ADI1 (ENSPPRG00000015485)	RNASEH1 (ENSPPRG00000015513)	RPS7 (ENSPPRG00000015564)	COLEC11 (ENSPPRG00000015594)	ALLC (ENSPPRG00000015621)	DCDC2C (ENSPPRG00000015663)	CMPK2 (ENSPPRG00000015716)	RSAD2 (ENSPPRG00000015738)	RNF144A (ENSPPRG00000015759)	ENSPPRG00000015776	ID2 (ENSPPRG00000015804)	KIDINS220 (ENSPPRG00000016171)	MBOAT2 (ENSPPRG00000016261)	ASAP2 (ENSPPRG00000016539) #19	ITGB1BP1 (ENSPPRG00000016726) #21	CPSF3 (ENSPPRG00000016790) #22	IAH1 (ENSPPRG00000016876) #23	ADAM17 (ENSPPRG00000016991) #24	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #25	TAF1B (ENSPPRG00000017125) #27	GRHL1 (ENSPPRG00000017279) #28	KLF11 (ENSPPRG00000017354) #29	RRM2 (ENSPPRG00000017387) #30	ENSPPRG00000017433 #31	HPCAL1 (ENSPPRG00000017486) #31	ODC1 (ENSPPRG00000017534) #32	NOL10 (ENSPPRG00000017868) #33	ATP6V1C2 (ENSPPRG00000018018) #34	PDIA6 (ENSPPRG00000018159) #35	KCNF1 (ENSPPRG00000020006)
Cat	MODERN SPECIES	2	ADI1 (ENSFCAG00000025763)	RNASEH1 (ENSFCAG00000025832)	RPS7 (ENSFCAG00000023243)	COLEC11 (ENSFCAG00000031800)	ALLC (ENSFCAG00000007504)	DCDC2C (ENSFCAG00000044946)	SOX11 (ENSFCAG00000039092)	CMPK2 (ENSFCAG00000022513)	RSAD2 (ENSFCAG00000035139)	RNF144A (ENSFCAG00000000709)	ID2 (ENSFCAG00000026937)	KIDINS220 (ENSFCAG00000029422)	MBOAT2 (ENSFCAG00000027684)	ASAP2 (ENSFCAG00000007850) #19	ITGB1BP1 (ENSFCAG00000034320) #21	CPSF3 (ENSFCAG00000007852) #22	IAH1 (ENSFCAG00000023291) #23	ADAM17 (ENSFCAG00000007853) #24	YWHAQ (ENSFCAG00000007854) ##25	TAF1B (ENSFCAG00000007855) #27	GRHL1 (ENSFCAG00000007856) #28	KLF11 (ENSFCAG00000030965) #29	CYS1 (ENSFCAG00000045113)	RRM2 (ENSFCAG00000003942) #30	HPCAL1 (ENSFCAG00000009252) #31	ODC1 (ENSFCAG00000027500) #32	NOL10 (ENSFCAG00000009255) #33	ATP6V1C2 (ENSFCAG00000009257) #34	PDIA6 (ENSFCAG00000009258) #35	KCNF1 (ENSFCAG00000031035)	CA3H2orf50 (ENSFCAG00000044685)
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Equus	ANCESTRAL SPECIES	7	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Donkey	MODERN SPECIES	26	ADI1 (ENSEASG00005022195)	RNASEH1 (ENSEASG00005022200)	RPS7 (ENSEASG00005022205)	COLEC11 (ENSEASG00005037869)	ALLC (ENSEASG00005022214)	ENSEASG00005022219	ENSEASG00005035871	CMPK2 (ENSEASG00005022223)	RSAD2 (ENSEASG00005022224)	RNF144A (ENSEASG00005022228)	ID2 (ENSEASG00005000025)	KIDINS220 (ENSEASG00005000060)	MBOAT2 (ENSEASG00005000101)	ASAP2 (ENSEASG00005000562) #19	ITGB1BP1 (ENSEASG00005003969) #21	CPSF3 (ENSEASG00005003970) #22	ENSEASG00005026278 #23	ADAM17 (ENSEASG00005004001) #24	YWHAQ (ENSEASG00005004792) #25	TAF1B (ENSEASG00005004803) #27	GRHL1 (ENSEASG00005028173) #28	KLF11 (ENSEASG00005004881) #29	CYS1 (ENSEASG00005025190)	RRM2 (ENSEASG00005004892) #30	HPCAL1 (ENSEASG00005004903) #31	ENSEASG00005004910 #32	NOL10 (ENSEASG00005004919) #33	ATP6V1C2 (ENSEASG00005004932) #34	PDIA6 (ENSEASG00005004942) #35	KCNF1 (ENSEASG00005027361)	C2orf50 (ENSEASG00005004947)
Horse	MODERN SPECIES	6	RPS7 (ENSECAG00000020253)	COLEC11 (ENSECAG00000017488)	ALLC (ENSECAG00000014068)	ENSECAG00000013638	ENSECAG00000053393	SOX11 (ENSECAG00000037831)	CMPK2 (ENSECAG00000012773)	RSAD2 (ENSECAG00000010055)	RNF144A (ENSECAG00000009610)	ID2 (ENSECAG00000008738)	KIDINS220 (ENSECAG00000019263)	MBOAT2 (ENSECAG00000015922)	ENSECAG00000054846	ASAP2 (ENSECAG00000024278) #19	ITGB1BP1 (ENSECAG00000024193) #21	CPSF3 (ENSECAG00000019911) #22	IAH1 (ENSECAG00000018250) #23	ADAM17 (ENSECAG00000005760) #24	ENSECAG00000050309	YWHAQ (ENSECAG00000004925) ##25	TAF1B (ENSECAG00000023244) #27	GRHL1 (ENSECAG00000015969) #28	KLF11 (ENSECAG00000015820) #29	CYS1 (ENSECAG00000039359)	RRM2 (ENSECAG00000007464) #30	HPCAL1 (ENSECAG00000040270) #31	ODC1 (ENSECAG00000022690) #32	NOL10 (ENSECAG00000015177) #33	ATP6V1C2 (ENSECAG00000010555) #34	PDIA6 (ENSECAG00000022717) #35	KCNF1 (ENSECAG00000002935)
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Megabat	MODERN SPECIES	1372														ASAP2 (ENSPVAG00000005303) #19	ITGB1BP1 (ENSPVAG00000005320) #21	CPSF3 (ENSPVAG00000005324) #22	IAH1 (ENSPVAG00000005329) #23	ADAM17 (ENSPVAG00000005332) #24	ENSPVAG00000005334 ##25
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000016845	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Greater horseshoe bat	MODERN SPECIES	4	COLEC11 (ENSRFEG00010010705)	ALLC (ENSRFEG00010010543)	DCDC2C (ENSRFEG00010010389)	SOX11 (ENSRFEG00010010241)	ENSRFEG00010010195	CMPK2 (ENSRFEG00010010183)	RSAD2 (ENSRFEG00010010140)	RNF144A (ENSRFEG00010010097)	ENSRFEG00010010062	KIDINS220 (ENSRFEG00010009917)	MBOAT2 (ENSRFEG00010009854)	ENSRFEG00010009833	ENSRFEG00010009824	ASAP2 (ENSRFEG00010009716) #19	ITGB1BP1 (ENSRFEG00010009640) #21	CPSF3 (ENSRFEG00010009573) #22	IAH1 (ENSRFEG00010009506) #23	ADAM17 (ENSRFEG00010009462) #24	YWHAQ (ENSRFEG00010009419) #25	TAF1B (ENSRFEG00010009242) #27	ENSRFEG00010009191	GRHL1 (ENSRFEG00010008922) #28	KLF11 (ENSRFEG00010008867) #29	CYS1 (ENSRFEG00010008838)	ENSRFEG00010008723 #30	HPCAL1 (ENSRFEG00010008686) #31	ODC1 (ENSRFEG00010008653) #32	NOL10 (ENSRFEG00010008527) #33	ATP6V1C2 (ENSRFEG00010008402) #34	PDIA6 (ENSRFEG00010008218) #35	KCNF1 (ENSRFEG00010008182)
Microbat	MODERN SPECIES	1345															ITGB1BP1 (ENSMLUG00000010629) #21	CPSF3 (ENSMLUG00000010636) #22	IAH1 (ENSMLUG00000010667) #23	ADAM17 (ENSMLUG00000010676) #24	YWHAQ (ENSMLUG00000005383) #25	TAF1B (ENSMLUG00000002273) #27	GRHL1 (ENSMLUG00000002290) #28	KLF11 (ENSMLUG00000002295) #29	RRM2 (ENSMLUG00000010596) #30	ENSMLUG00000010423 #32	NOL10 (ENSMLUG00000012309) #33	ATP6V1C2 (ENSMLUG00000012207) #34	PDIA6 (ENSMLUG00000012215) #35	SLC66A3 (ENSMLUG00000015653) #37	ROCK2 (ENSMLUG00000015664)	ENSMLUG00000003384	GREB1 (ENSMLUG00000000221)
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Xenarthra	ANCESTRAL SPECIES	395											ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29
Sloth	MODERN SPECIES	1732																CPSF3 (ENSCHOG00000000180) #22	IAH1 (ENSCHOG00000000183) #23	ADAM17 (ENSCHOG00000000187) #24
Armadillo	MODERN SPECIES	1449									ENSDNOG00000042784	ID2 (ENSDNOG00000035918)	KIDINS220 (ENSDNOG00000002905)	MBOAT2 (ENSDNOG00000041557)	ENSDNOG00000041786	ASAP2 (ENSDNOG00000008886) #19	ITGB1BP1 (ENSDNOG00000008930) #21	CPSF3 (ENSDNOG00000008940) #22	IAH1 (ENSDNOG00000009272) #23	ADAM17 (ENSDNOG00000009284) #24	ENSDNOG00000033666	TAF1B (ENSDNOG00000018268) #27	GRHL1 (ENSDNOG00000014493) #28	KLF11 (ENSDNOG00000035689) #29	ENSDNOG00000047738	ENSDNOG00000012581
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Tenrec	MODERN SPECIES	4531														ASAP2 (ENSETEG00000003881) #19	ITGB1BP1 (ENSETEG00000003890) #21	CPSF3 (ENSETEG00000003893) #22	IAH1 (ENSETEG00000003899) #23	ADAM17 (ENSETEG00000003902) #24
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Hyrax	MODERN SPECIES	1552																CPSF3 (ENSPCAG00000015042) #22
Elephant	MODERN SPECIES	197	RNASEH1 (ENSLAFG00000015091)	RPS7 (ENSLAFG00000015087)	COLEC11 (ENSLAFG00000021841)	ALLC (ENSLAFG00000013751)	ENSLAFG00000027245	ENSLAFG00000026156	SOX11 (ENSLAFG00000006327)	CMPK2 (ENSLAFG00000031856)	RSAD2 (ENSLAFG00000017097)	RNF144A (ENSLAFG00000001936)	ID2 (ENSLAFG00000006910)	KIDINS220 (ENSLAFG00000014141)	MBOAT2 (ENSLAFG00000008586)	ASAP2 (ENSLAFG00000009029) #19	ITGB1BP1 (ENSLAFG00000009036) #21	CPSF3 (ENSLAFG00000009467) #22	IAH1 (ENSLAFG00000009469) #23	ADAM17 (ENSLAFG00000009473) #24	YWHAQ (ENSLAFG00000009482) #25	TAF1B (ENSLAFG00000000782) #27	GRHL1 (ENSLAFG00000009330) #28	KLF11 (ENSLAFG00000032182) #29	ENSLAFG00000026037	RRM2 (ENSLAFG00000003627) #30	HPCAL1 (ENSLAFG00000004069) #31	ODC1 (ENSLAFG00000005330) #32	NOL10 (ENSLAFG00000010489) #33	ATP6V1C2 (ENSLAFG00000022630) #34	PDIA6 (ENSLAFG00000012281) #35	KCNF1 (ENSLAFG00000008774)	ENSLAFG00000026811
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT01090000259995.a.b.c.a	ENSGT01090000259995.a.b.c.b
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT01090000259995.a.b.c.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b	ENSGT00390000014122.i.b.a.a	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT01090000259995.a.b.c.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Common wonbat	MODERN SPECIES	574																CPSF3 (ENSVURG00010015934) #22	IAH1 (ENSVURG00010015962) #23	ADAM17 (ENSVURG00010015976) #24	YWHAQ (ENSVURG00010015992) #25	GRHL1 (ENSVURG00010016002) #28	KLF11 (ENSVURG00010016043) #29	RRM2 (ENSVURG00010016049) #30	HPCAL1 (ENSVURG00010016057) #31	ODC1 (ENSVURG00010016071) #32	NOL10 (ENSVURG00010016087) #33	ENSVURG00010016104 #34	PDIA6 (ENSVURG00010016129) #35	KCNF1 (ENSVURG00010016135)	ENSVURG00010016144	ENSVURG00010016148	ENSVURG00010016160
koala	MODERN SPECIES	47				SOX11 (ENSPCIG00000033221)	ENSPCIG00000001705	CMPK2 (ENSPCIG00000014961)	RSAD2 (ENSPCIG00000014960)	RNF144A (ENSPCIG00000009611)	ENSPCIG00000014602	ENSPCIG00000014608	ID2 (ENSPCIG00000014613)	KIDINS220 (ENSPCIG00000014624)	MBOAT2 (ENSPCIG00000014636)	ASAP2 (ENSPCIG00000014642) #19	ITGB1BP1 (ENSPCIG00000031637) #21	CPSF3 (ENSPCIG00000009823) #22	IAH1 (ENSPCIG00000009821) #23	ADAM17 (ENSPCIG00000009820) #24	YWHAQ (ENSPCIG00000022985) #25	GRHL1 (ENSPCIG00000009811) #28	ENSPCIG00000009814	KLF11 (ENSPCIG00000009805) #29	RRM2 (ENSPCIG00000009801) #30	HPCAL1 (ENSPCIG00000028410) #31	ODC1 (ENSPCIG00000028406) #32	NOL10 (ENSPCIG00000022730) #33	ENSPCIG00000022723 #34	PDIA6 (ENSPCIG00000022719) #35	KCNF1 (ENSPCIG00000022717)	ENSPCIG00000037026	ENSPCIG00000031028
Wallaby	MODERN SPECIES	168																ENSMEUG00000013117 #22
Tasmanian devil	MODERN SPECIES	1	TRAPPC12 (ENSSHAG00000013794)	ADI1 (ENSSHAG00000031515)	ENSSHAG00000030451	RPS7 (ENSSHAG00000026004)	COLEC11 (ENSSHAG00000012488)	ALLC (ENSSHAG00000012095)	ENSSHAG00000011050	CMPK2 (ENSSHAG00000020558)	RSAD2 (ENSSHAG00000028215)	RNF144A (ENSSHAG00000007808)	ID2 (ENSSHAG00000024722)	KIDINS220 (ENSSHAG00000013088)	MBOAT2 (ENSSHAG00000012144)	ASAP2 (ENSSHAG00000008132) #19	ITGB1BP1 (ENSSHAG00000007675) #21	CPSF3 (ENSSHAG00000007024) #22	IAH1 (ENSSHAG00000006790) #23	ADAM17 (ENSSHAG00000006354) #24	YWHAQ (ENSSHAG00000027258) #25	TAF1B (ENSSHAG00000001155) #27	GRHL1 (ENSSHAG00000002291) #28	ENSSHAG00000005846 #29	ENSSHAG00000026867	ENSSHAG00000009991	CAPN14 (ENSSHAG00000012346)	EHD3 (ENSSHAG00000025583)	XDH (ENSSHAG00000013713)	ENSSHAG00000020888	ENSSHAG00000028280	SRD5A2 (ENSSHAG00000030408)	MEMO1 (ENSSHAG00000028323)
Opossum	MODERN SPECIES		COLEC11 (ENSMODG00000038328)	ALLC (ENSMODG00000014520)	ENSMODG00000023196	SOX11 (ENSMODG00000036476)	CMPK2 (ENSMODG00000014578)	RSAD2 (ENSMODG00000042627)	RNF144A (ENSMODG00000014586)	ENSMODG00000017695	ID2 (ENSMODG00000014618)	ENSMODG00000048947	KIDINS220 (ENSMODG00000014660)	MBOAT2 (ENSMODG00000014667)	ASAP2 (ENSMODG00000014685) #19	ITGB1BP1 (ENSMODG00000014691) #21	ENSMODG00000038673	CPSF3 (ENSMODG00000014703) #22	IAH1 (ENSMODG00000045560) #23	ADAM17 (ENSMODG00000014726) #24	ENSMODG00000014740 #25	TAF1B (ENSMODG00000014747) #27	GRHL1 (ENSMODG00000014753) #28	KLF11 (ENSMODG00000014758) #29	ENSMODG00000014763 #30	ENSMODG00000040102	HPCAL1 (ENSMODG00000014770) #31	ENSMODG00000014779 #32	NOL10 (ENSMODG00000014784) #33	ENSMODG00000014803 #34	PDIA6 (ENSMODG00000014811) #35	ENSMODG00000044983	KCNF1 (ENSMODG00000014817)
Platypus	MODERN SPECIES	84	ADI1 (ENSOANG00000015205)	ENSOANG00000050401	RPS7 (ENSOANG00000015206)	COLEC11 (ENSOANG00000044447)	ALLC (ENSOANG00000010920)	ENSOANG00000043470	SOX11 (ENSOANG00000042349)	ENSOANG00000036113	RSAD2 (ENSOANG00000049844)	RNF144A (ENSOANG00000051094)	ID2 (ENSOANG00000002547)	KIDINS220 (ENSOANG00000007570)	MBOAT2 (ENSOANG00000007571)	ASAP2 (ENSOANG00000004708) #19	ITGB1BP1 (ENSOANG00000006950) #21	CPSF3 (ENSOANG00000008577) #22	ENSOANG00000047163 #23	ADAM17 (ENSOANG00000013331) #24
Sauria	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Lepidosauria	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Episquamata	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Laterata	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Common wall lizard	MODERN SPECIES	11	RPS7 (ENSPMRG00000011523)	COLEC11 (ENSPMRG00000011530)	ALLC (ENSPMRG00000011540)	ENSPMRG00000011567	ENSPMRG00000011572	ENSPMRG00000011574	SOX11 (ENSPMRG00000011579)	CMPK2 (ENSPMRG00000011581)	RSAD2 (ENSPMRG00000011584)	RNF144A (ENSPMRG00000011590)	ID2 (ENSPMRG00000011594)	KIDINS220 (ENSPMRG00000011602)	MBOAT2 (ENSPMRG00000011615)	ASAP2 (ENSPMRG00000011623) #19	ITGB1BP1 (ENSPMRG00000011647) #21	CPSF3 (ENSPMRG00000011656) #22	IAH1 (ENSPMRG00000011668) #23	ADAM17 (ENSPMRG00000011682) #24	ENSPMRG00000011696 #25	ENSPMRG00000011699	TAF1B (ENSPMRG00000011702) #27	GRHL1 (ENSPMRG00000011712) #28	KLF11 (ENSPMRG00000011727) #29	RRM2 (ENSPMRG00000011731) #30	NOL10 (ENSPMRG00000011740) #33	HPCAL1 (ENSPMRG00000011758) #31	ODC1 (ENSPMRG00000011766) #32	ATP6V1C2 (ENSPMRG00000011774) #34	PDIA6 (ENSPMRG00000011782) #35	KCNF1 (ENSPMRG00000011788)	C2orf50 (ENSPMRG00000002369)
Argentine black and white tegu	MODERN SPECIES	9	DCDC2C (ENSSMRG00000006515)	SOX11 (ENSSMRG00000006504)	ENSSMRG00000006493	ENSSMRG00000006489	ENSSMRG00000006484	ENSSMRG00000006470	CMPK2 (ENSSMRG00000006467)	RSAD2 (ENSSMRG00000006397)	RNF144A (ENSSMRG00000006394)	ENSSMRG00000006368	ID2 (ENSSMRG00000006348)	KIDINS220 (ENSSMRG00000006306)	MBOAT2 (ENSSMRG00000006296)	ASAP2 (ENSSMRG00000006275) #19	ITGB1BP1 (ENSSMRG00000006271) #21	CPSF3 (ENSSMRG00000006269) #22	IAH1 (ENSSMRG00000006268) #23	ADAM17 (ENSSMRG00000006231) #24	YWHAQ (ENSSMRG00000006227) #25	TAF1B (ENSSMRG00000006214) #27	ENSSMRG00000006208 #28	ENSSMRG00000006187 #28	KLF11 (ENSSMRG00000006180) #29	RRM2 (ENSSMRG00000006152) #30	HPCAL1 (ENSSMRG00000006133) #31	ODC1 (ENSSMRG00000006061) #32	NOL10 (ENSSMRG00000006057) #33	ATP6V1C2 (ENSSMRG00000006042) #34	PDIA6 (ENSSMRG00000006032) #35	KCNF1 (ENSSMRG00000006005)	SLC66A3 (ENSSMRG00000006003) #37
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Elapidae	ANCESTRAL SPECIES		ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Eastern brown snake	MODERN SPECIES	4	ADI1 (ENSPTXG00000010914)	RNASEH1 (ENSPTXG00000010917)	RPS7 (ENSPTXG00000010919)	ENSPTXG00000010920	COLEC11 (ENSPTXG00000010922)	DCDC2C (ENSPTXG00000010924)	SOX11 (ENSPTXG00000010926)	CMPK2 (ENSPTXG00000010928)	RSAD2 (ENSPTXG00000010934)	RNF144A (ENSPTXG00000010943)	ID2 (ENSPTXG00000010944)	KIDINS220 (ENSPTXG00000010945)	MBOAT2 (ENSPTXG00000010950)	ASAP2 (ENSPTXG00000010952) #19	ITGB1BP1 (ENSPTXG00000010957) #21	CPSF3 (ENSPTXG00000010959) #22	IAH1 (ENSPTXG00000010961) #23	ADAM17 (ENSPTXG00000010969) #24	YWHAQ (ENSPTXG00000012051) #25	ENSPTXG00000012054 #27	ENSPTXG00000012055 #27	GRHL1 (ENSPTXG00000012057) #28	KLF11 (ENSPTXG00000012059) #29	MTO1 (ENSPTXG00000012060)	RRM2 (ENSPTXG00000012071) #30	HPCAL1 (ENSPTXG00000012834) #31	ODC1 (ENSPTXG00000012836) #32	NOL10 (ENSPTXG00000012838) #33	ATP6V1C2 (ENSPTXG00000012840) #34	PDIA6 (ENSPTXG00000012842) #35	KCNF1 (ENSPTXG00000012843)
Mainland tiger snake	MODERN SPECIES	61						SOX11 (ENSNSUG00000020465)	CMPK2 (ENSNSUG00000020464)	RSAD2 (ENSNSUG00000020463)	RNF144A (ENSNSUG00000020462)	ID2 (ENSNSUG00000020460)	KIDINS220 (ENSNSUG00000020459)	MBOAT2 (ENSNSUG00000020458)	ENSNSUG00000020457	ASAP2 (ENSNSUG00000020456) #19	ITGB1BP1 (ENSNSUG00000020455) #21	CPSF3 (ENSNSUG00000020429) #22	IAH1 (ENSNSUG00000020427) #23	ADAM17 (ENSNSUG00000020420) #24	YWHAQ (ENSNSUG00000020419) #25	TAF1B (ENSNSUG00000020418) #27	GRHL1 (ENSNSUG00000020417) #28	KLF11 (ENSNSUG00000020416) #29	MTO1 (ENSNSUG00000020415)	RRM2 (ENSNSUG00000020414) #30	HPCAL1 (ENSNSUG00000020412) #31	ODC1 (ENSNSUG00000020411) #32	NOL10 (ENSNSUG00000020410) #33	ATP6V1C2 (ENSNSUG00000020409) #34	PDIA6 (ENSNSUG00000020408) #35	KCNF1 (ENSNSUG00000020407)	C2orf50 (ENSNSUG00000020406)
Blue-lipped sea krait	MODERN SPECIES	2390															ITGB1BP1 (ENSLLTG00000001900) #21	CPSF3 (ENSLLTG00000001877) #22	IAH1 (ENSLLTG00000001860) #23	ADAM17 (ENSLLTG00000001846) #24
Indian cobra	MODERN SPECIES		RNASEH1 (ENSNNAG00000010875)	RPS7 (ENSNNAG00000010947)	COLEC11 (ENSNNAG00000010989)	DCDC2C (ENSNNAG00000011041)	SOX11 (ENSNNAG00000011078)	CMPK2 (ENSNNAG00000011083)	RSAD2 (ENSNNAG00000011105)	RNF144A (ENSNNAG00000011228)	ID2 (ENSNNAG00000011245)	ENSNNAG00000011258	KIDINS220 (ENSNNAG00000011277)	MBOAT2 (ENSNNAG00000011525)	ASAP2 (ENSNNAG00000011592) #19	ITGB1BP1 (ENSNNAG00000011812) #21	ENSNNAG00000011863	CPSF3 (ENSNNAG00000011872) #22	IAH1 (ENSNNAG00000011930) #23	ADAM17 (ENSNNAG00000011958) #24	YWHAQ (ENSNNAG00000012018) #25	TAF1B (ENSNNAG00000012041) #27	GRHL1 (ENSNNAG00000012148) #28	KLF11 (ENSNNAG00000012239) #29	ENSNNAG00000012268	ENSNNAG00000012297	ENSNNAG00000012340	ENSNNAG00000012348	RRM2 (ENSNNAG00000012363) #30	HPCAL1 (ENSNNAG00000012397) #31	ODC1 (ENSNNAG00000012411) #32	NOL10 (ENSNNAG00000012445) #33	ATP6V1C2 (ENSNNAG00000012518) #34
Lizard	MODERN SPECIES		KLHL31 (ENSACAG00000008404)	ENSACAG00000036656	ENSACAG00000035511	CMPK2 (ENSACAG00000007078)	RSAD2 (ENSACAG00000039042)	RNF144A (ENSACAG00000007048)	ENSACAG00000039383	ENSACAG00000040261	ID2 (ENSACAG00000042556)	KIDINS220 (ENSACAG00000002386)	ENSACAG00000037631	MBOAT2 (ENSACAG00000002267)	ENSACAG00000041154	ASAP2 (ENSACAG00000002004) #19	ITGB1BP1 (ENSACAG00000001993) #21	CPSF3 (ENSACAG00000001759) #22	ENSACAG00000021110	IAH1 (ENSACAG00000001615) #23	ADAM17 (ENSACAG00000001356) #24	YWHAQ (ENSACAG00000001306) #25	ENSACAG00000039990	ENSACAG00000040391	ENSACAG00000040523	TAF1B (ENSACAG00000000152) #27	ENSACAG00000040408	GRHL1 (ENSACAG00000000132) #28	KLF11 (ENSACAG00000000128) #29	RRM2 (ENSACAG00000000112) #30	HPCAL1 (ENSACAG00000012561) #31	ODC1 (ENSACAG00000012600) #32	NOL10 (ENSACAG00000012738) #33
tuatara	MODERN SPECIES	1059						ENSSPUG00000015261	SRSF4 (ENSSPUG00000015318)	MECR (ENSSPUG00000015330)	PTPRU (ENSSPUG00000015342)	ENSSPUG00000015377	ID2 (ENSSPUG00000015382)	KIDINS220 (ENSSPUG00000015402)	MBOAT2 (ENSSPUG00000015454)	ASAP2 (ENSSPUG00000015478) #19	ITGB1BP1 (ENSSPUG00000015506) #21	CPSF3 (ENSSPUG00000015525) #22	IAH1 (ENSSPUG00000015596) #23	ADAM17 (ENSSPUG00000015632) #24	YWHAQ (ENSSPUG00000015663) #25	TAF1B (ENSSPUG00000015685) #27	GRHL1 (ENSSPUG00000015713) #28	KLF11 (ENSSPUG00000015734) #29	HPCAL1 (ENSSPUG00000015772) #31	ODC1 (ENSSPUG00000015782) #32	NOL10 (ENSSPUG00000015811) #33	ENSSPUG00000015855 #34	PDIA6 (ENSSPUG00000015876) #35
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
Emydidae	ANCESTRAL SPECIES	8	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B
painted turtle	MODERN SPECIES	2390							SOX11 (ENSCPBG00000014153)	CMPK2 (ENSCPBG00000014149)	RSAD2 (ENSCPBG00000014146)	RNF144A (ENSCPBG00000014144)	ID2 (ENSCPBG00000014130)	KIDINS220 (ENSCPBG00000014107)	MBOAT2 (ENSCPBG00000014088)	ASAP2 (ENSCPBG00000014081) #19	ITGB1BP1 (ENSCPBG00000014075) #21	CPSF3 (ENSCPBG00000014074) #22	IAH1 (ENSCPBG00000014070) #23	ADAM17 (ENSCPBG00000014063) #24	YWHAQ (ENSCPBG00000014061) #25	TAF1B (ENSCPBG00000014058) #27	GRHL1 (ENSCPBG00000014054) #28	KLF11 (ENSCPBG00000014051) #29	ENSCPBG00000014048	RRM2 (ENSCPBG00000014047) #30	ATP6V1C2 (ENSCPBG00000014032) #34	PDIA6 (ENSCPBG00000014031) #35	KCNF1 (ENSCPBG00000014030)	C2orf50 (ENSCPBG00000014027)	SLC66A3 (ENSCPBG00000014025) #37	ROCK2 (ENSCPBG00000014009)	E2F6 (ENSCPBG00000014007)
Three-toed box turtle	MODERN SPECIES	15	RNASEH1 (ENSTMTG00000001541)	RPS7 (ENSTMTG00000001554)	COLEC11 (ENSTMTG00000001570)	ALLC (ENSTMTG00000001582)	DCDC2C (ENSTMTG00000001593)	ENSTMTG00000001613	SOX11 (ENSTMTG00000001626)	CMPK2 (ENSTMTG00000001631)	RSAD2 (ENSTMTG00000001639)	RNF144A (ENSTMTG00000001652)	ID2 (ENSTMTG00000001659)	KIDINS220 (ENSTMTG00000001670)	MBOAT2 (ENSTMTG00000001696)	ASAP2 (ENSTMTG00000001754) #19	ITGB1BP1 (ENSTMTG00000002109) #21	CPSF3 (ENSTMTG00000002118) #22	IAH1 (ENSTMTG00000002139) #23	ADAM17 (ENSTMTG00000002145) #24	YWHAQ (ENSTMTG00000002159) #25	TAF1B (ENSTMTG00000002170) #27	ENSTMTG00000002182 #28	ENSTMTG00000002187 #28	KLF11 (ENSTMTG00000002194) #29	RRM2 (ENSTMTG00000002199) #30	HPCAL1 (ENSTMTG00000002212) #31	ODC1 (ENSTMTG00000002221) #32	NOL10 (ENSTMTG00000002231) #33	ATP6V1C2 (ENSTMTG00000002250) #34	PDIA6 (ENSTMTG00000002306) #35	KCNF1 (ENSTMTG00000002317)	C2orf50 (ENSTMTG00000002318)
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Goode s thornscrub tortoise	MODERN SPECIES	17	RPS7 (ENSGEVG00005009060)	COLEC11 (ENSGEVG00005009003)	ALLC (ENSGEVG00005008921)	DCDC2C (ENSGEVG00005008873)	ENSGEVG00005008842	SOX11 (ENSGEVG00005008815)	ENSGEVG00005008806	CMPK2 (ENSGEVG00005008784)	RSAD2 (ENSGEVG00005008769)	RNF144A (ENSGEVG00005008742)	ID2 (ENSGEVG00005008728)	KIDINS220 (ENSGEVG00005008688)	MBOAT2 (ENSGEVG00005008645)	ASAP2 (ENSGEVG00005008532) #19	ITGB1BP1 (ENSGEVG00005008492) #21	CPSF3 (ENSGEVG00005008438) #22	IAH1 (ENSGEVG00005008414) #23	ADAM17 (ENSGEVG00005008380) #24	YWHAQ (ENSGEVG00005008366) #25	TAF1B (ENSGEVG00005008345) #27	GRHL1 (ENSGEVG00005008039) #28	KLF11 (ENSGEVG00005007934) #29	RRM2 (ENSGEVG00005007899) #30	HPCAL1 (ENSGEVG00005007881) #31	ODC1 (ENSGEVG00005007862) #32	NOL10 (ENSGEVG00005007769) #33	ATP6V1C2 (ENSGEVG00005007637) #34	PDIA6 (ENSGEVG00005007586) #35	KCNF1 (ENSGEVG00005007578)	C2orf50 (ENSGEVG00005007561)	SLC66A3 (ENSGEVG00005007519) #37
Abingdon island giant tortoise	MODERN SPECIES	1873											ID2 (ENSCABG00000022747)	KIDINS220 (ENSCABG00000022761)	MBOAT2 (ENSCABG00000022871)	ASAP2 (ENSCABG00000022892) #19	ITGB1BP1 (ENSCABG00000022906) #21	CPSF3 (ENSCABG00000022908) #22
Chinese turtle	MODERN SPECIES	1137										RNF144A (ENSPSIG00000004494)	ID2 (ENSPSIG00000004438)	KIDINS220 (ENSPSIG00000017562)	MBOAT2 (ENSPSIG00000017486)	ASAP2 (ENSPSIG00000017299) #19	ITGB1BP1 (ENSPSIG00000016662) #21	CPSF3 (ENSPSIG00000016144) #22	IAH1 (ENSPSIG00000015583) #23	ADAM17 (ENSPSIG00000013693) #24	YWHAQ (ENSPSIG00000012692) #25	TAF1B (ENSPSIG00000012081) #27	GRHL1 (ENSPSIG00000010930) #28	KLF11 (ENSPSIG00000010816) #29	RRM2 (ENSPSIG00000009363) #30
Archosauria	ANCESTRAL SPECIES	3	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000162396	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Australian saltwater crocodile	MODERN SPECIES	38	ENSCPRG00005008536	ENSCPRG00005008530	COLEC11 (ENSCPRG00005008511)	ALLC (ENSCPRG00005008494)	DCDC2C (ENSCPRG00005008489)	SOX11 (ENSCPRG00005008466)	CMPK2 (ENSCPRG00005008440)	RSAD2 (ENSCPRG00005008433)	RNF144A (ENSCPRG00005008430)	UBE2F (ENSCPRG00005008370)	ID2 (ENSCPRG00005008324)	KIDINS220 (ENSCPRG00005007277)	MBOAT2 (ENSCPRG00005007103)	ASAP2 (ENSCPRG00005007065) #19	ITGB1BP1 (ENSCPRG00005007062) #21	CPSF3 (ENSCPRG00005007046) #22	IAH1 (ENSCPRG00005007037) #23	ADAM17 (ENSCPRG00005006916) #24	ENSCPRG00005006866 ##25	YWHAQ (ENSCPRG00005006856) #25	TAF1B (ENSCPRG00005006808) #27	GRHL1 (ENSCPRG00005006677) #28	KLF11 (ENSCPRG00005006661) #29	RRM2 (ENSCPRG00005006653) #30	HPCAL1 (ENSCPRG00005006636) #31	ODC1 (ENSCPRG00005006625) #32	NOL10 (ENSCPRG00005006615) #33	ATP6V1C2 (ENSCPRG00005006593) #34	PDIA6 (ENSCPRG00005006586) #35	KCNF1 (ENSCPRG00005006569)	C2orf50 (ENSCPRG00005006553)
Aves	ANCESTRAL SPECIES	10	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
African ostrich	MODERN SPECIES	790												KIDINS220 (ENSSCUG00000012039)	MBOAT2 (ENSSCUG00000012046)	ASAP2 (ENSSCUG00000012052) #19	ITGB1BP1 (ENSSCUG00000012054) #21	CPSF3 (ENSSCUG00000012059) #22	IAH1 (ENSSCUG00000012062) #23	ADAM17 (ENSSCUG00000012064) #24	YWHAQ (ENSSCUG00000012068) #25	RRM2 (ENSSCUG00000012069) #30	ENSSCUG00000012072
Neognathae	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37	ENSGT01030000234517.D
Great tit	MODERN SPECIES	22	EIPR1 (ENSPMJG00000010339)	TRAPPC12 (ENSPMJG00000010410)	ADI1 (ENSPMJG00000010411)	RNASEH1 (ENSPMJG00000010412)	RPS7 (ENSPMJG00000010413)	COLEC11 (ENSPMJG00000010415)	SOX11 (ENSPMJG00000010517)	CMPK2 (ENSPMJG00000010562)	RSAD2 (ENSPMJG00000010563)	RNF144A (ENSPMJG00000010564)	ID2 (ENSPMJG00000010632)	KIDINS220 (ENSPMJG00000010635)	MBOAT2 (ENSPMJG00000010666)	ASAP2 (ENSPMJG00000010679) #19	ITGB1BP1 (ENSPMJG00000012392) #21	CPSF3 (ENSPMJG00000012393) #22	IAH1 (ENSPMJG00000012394) #23	ADAM17 (ENSPMJG00000012400) #24	YWHAQ (ENSPMJG00000012403) #25	TAF1B (ENSPMJG00000012405) #27	GRHL1 (ENSPMJG00000012412) #28	KLF11 (ENSPMJG00000012416) #29	RRM2 (ENSPMJG00000012420) #30	HPCAL1 (ENSPMJG00000012424) #31	ODC1 (ENSPMJG00000012426) #32	NOL10 (ENSPMJG00000012429) #33	ATP6V1C2 (ENSPMJG00000012432) #34	PDIA6 (ENSPMJG00000012436) #35	SLC66A3 (ENSPMJG00000012442) #37	ROCK2 (ENSPMJG00000012447)	E2F6 (ENSPMJG00000012450)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612.p #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37	ENSGT01030000234517.D
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612.p #28	ENSGT00940000157612.o #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	21							ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473)	RNF144A (ENSGFOG00000008461)	ID2 (ENSGFOG00000008458)	KIDINS220 (ENSGFOG00000008427)	MBOAT2 (ENSGFOG00000008417)	ASAP2 (ENSGFOG00000008371) #19	ITGB1BP1 (ENSGFOG00000008352) #21	ENSGFOG00000008345 #22	ENSGFOG00000008332 #22	IAH1 (ENSGFOG00000008321) #23	ADAM17 (ENSGFOG00000008025) #24	YWHAQ (ENSGFOG00000007990) #25	TAF1B (ENSGFOG00000007971) #27	ENSGFOG00000007959 #28	ENSGFOG00000007956 #28	KLF11 (ENSGFOG00000007951) #29	RRM2 (ENSGFOG00000007690) #30	HPCAL1 (ENSGFOG00000007664) #31	ODC1 (ENSGFOG00000007655) #32	NOL10 (ENSGFOG00000007627) #33	ATP6V1C2 (ENSGFOG00000007570) #34	PDIA6 (ENSGFOG00000007553) #35	KCNF1 (ENSGFOG00000007549)	SLC66A3 (ENSGFOG00000007534) #37
Medium ground finch	MODERN SPECIES	21								ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473)	RNF144A (ENSGFOG00000008461)	ID2 (ENSGFOG00000008458)	KIDINS220 (ENSGFOG00000008427)	MBOAT2 (ENSGFOG00000008417)	ASAP2 (ENSGFOG00000008371) #19	ITGB1BP1 (ENSGFOG00000008352) #21	ENSGFOG00000008345 #22	ENSGFOG00000008332 #22	IAH1 (ENSGFOG00000008321) #23	ADAM17 (ENSGFOG00000008025) #24	YWHAQ (ENSGFOG00000007990) #25	TAF1B (ENSGFOG00000007971) #27	ENSGFOG00000007959 #28	ENSGFOG00000007956 #28	KLF11 (ENSGFOG00000007951) #29	RRM2 (ENSGFOG00000007690) #30	HPCAL1 (ENSGFOG00000007664) #31	ODC1 (ENSGFOG00000007655) #32	NOL10 (ENSGFOG00000007627) #33	ATP6V1C2 (ENSGFOG00000007570) #34	PDIA6 (ENSGFOG00000007553) #35	KCNF1 (ENSGFOG00000007549)
Passeroidea	ANCESTRAL SPECIES		ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00990000204270	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612.o #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000153916.B #37	ENSGT00990000205825
Zebra finch	MODERN SPECIES	23	MYT1L (ENSTGUG00000012971) #16	EIPR1 (ENSTGUG00000012973)	TRAPPC12 (ENSTGUG00000012974)	RNASEH1 (ENSTGUG00000012980)	RPS7 (ENSTGUG00000012983)	COLEC11 (ENSTGUG00000022930)	SOX11 (ENSTGUG00000012987)	ENSTGUG00000022230	RSAD2 (ENSTGUG00000012992)	RNF144A (ENSTGUG00000022180)	ID2 (ENSTGUG00000012998)	KIDINS220 (ENSTGUG00000012999)	MBOAT2 (ENSTGUG00000013004)	ASAP2 (ENSTGUG00000013006) #19	ITGB1BP1 (ENSTGUG00000013015) #21	CPSF3 (ENSTGUG00000013016) #22	IAH1 (ENSTGUG00000013025) #23	ADAM17 (ENSTGUG00000013028) #24	YWHAQ (ENSTGUG00000013035) #25	TAF1B (ENSTGUG00000013037) #27	GRHL1 (ENSTGUG00000013038) #28	KLF11 (ENSTGUG00000013041) #29	RRM2 (ENSTGUG00000013042) #30	HPCAL1 (ENSTGUG00000013044) #31	ODC1 (ENSTGUG00000013045) #32	NOL10 (ENSTGUG00000013047) #33	ATP6V1C2 (ENSTGUG00000013053) #34	PDIA6 (ENSTGUG00000013056) #35	SLC66A3 (ENSTGUG00000026462) #37	ENSTGUG00000023758	ROCK2 (ENSTGUG00000013067)
Common canary	MODERN SPECIES	1	MYT1L (ENSSCAG00000012053) #16	EIPR1 (ENSSCAG00000012104)	TRAPPC12 (ENSSCAG00000012110)	ADI1 (ENSSCAG00000012116)	RNASEH1 (ENSSCAG00000012122)	RPS7 (ENSSCAG00000012160)	COLEC11 (ENSSCAG00000012167)	ENSSCAG00000012187	RSAD2 (ENSSCAG00000012190)	RNF144A (ENSSCAG00000012205)	ID2 (ENSSCAG00000012234)	KIDINS220 (ENSSCAG00000012242)	MBOAT2 (ENSSCAG00000012256)	ASAP2 (ENSSCAG00000012272) #19	ITGB1BP1 (ENSSCAG00000012285) #21	CPSF3 (ENSSCAG00000012290) #22	IAH1 (ENSSCAG00000012295) #23	ADAM17 (ENSSCAG00000012301) #24	YWHAQ (ENSSCAG00000012308) #25	GRHL1 (ENSSCAG00000012341) #28	KLF11 (ENSSCAG00000012362) #29	RRM2 (ENSSCAG00000012371) #30	HPCAL1 (ENSSCAG00000012381) #31	ODC1 (ENSSCAG00000012395) #32	NOL10 (ENSSCAG00000012402) #33	ATP6V1C2 (ENSSCAG00000012422) #34	PDIA6 (ENSSCAG00000012514) #35	KCNF1 (ENSSCAG00000012548)	SLC66A3 (ENSSCAG00000012565) #37	ROCK2 (ENSSCAG00000012610)	E2F6 (ENSSCAG00000012631)
Flycatcher	MODERN SPECIES	21	ADI1 (ENSFALG00000028712)	RNASEH1 (ENSFALG00000027698)	RPS7 (ENSFALG00000024743)	COLEC11 (ENSFALG00000002076)	ENSFALG00000024355	SOX11 (ENSFALG00000014554)	ENSFALG00000025049	CMPK2 (ENSFALG00000023392)	RSAD2 (ENSFALG00000006483)	RNF144A (ENSFALG00000027037)	ID2 (ENSFALG00000006518)	KIDINS220 (ENSFALG00000006522)	MBOAT2 (ENSFALG00000006544)	ASAP2 (ENSFALG00000006556) #19	ITGB1BP1 (ENSFALG00000026175) #21	CPSF3 (ENSFALG00000006572) #22	IAH1 (ENSFALG00000006579) #23	ADAM17 (ENSFALG00000006611) #24	YWHAQ (ENSFALG00000023362) #25	TAF1B (ENSFALG00000006636) #27	GRHL1 (ENSFALG00000006639) #28	KLF11 (ENSFALG00000006648) #29	ENSFALG00000027922	RRM2 (ENSFALG00000022902) #30	HPCAL1 (ENSFALG00000006653) #31	ODC1 (ENSFALG00000006656) #32	NOL10 (ENSFALG00000006658) #33	ATP6V1C2 (ENSFALG00000006666) #34	PDIA6 (ENSFALG00000006683) #35	KCNF1 (ENSFALG00000014627)	SLC66A3 (ENSFALG00000024817) #37
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Kakapo	MODERN SPECIES	23	MYT1L (ENSSHBG00005000594) #16	EIPR1 (ENSSHBG00005000602)	TRAPPC12 (ENSSHBG00005000603)	ADI1 (ENSSHBG00005006001)	RNASEH1 (ENSSHBG00005006018)	RPS7 (ENSSHBG00005006046)	COLEC11 (ENSSHBG00005006078)	ENSSHBG00005006101	RSAD2 (ENSSHBG00005006118)	RNF144A (ENSSHBG00005006232)	ID2 (ENSSHBG00005006245)	KIDINS220 (ENSSHBG00005006291)	MBOAT2 (ENSSHBG00005006345)	ASAP2 (ENSSHBG00005006393) #19	ITGB1BP1 (ENSSHBG00005006432) #21	CPSF3 (ENSSHBG00005006481) #22	IAH1 (ENSSHBG00005006527) #23	ADAM17 (ENSSHBG00005006619) #24	YWHAQ (ENSSHBG00005006806) #25	TAF1B (ENSSHBG00005006841) #27	ENSSHBG00005006892 #28	ENSSHBG00005006922 #28	KLF11 (ENSSHBG00005006947) #29	RRM2 (ENSSHBG00005006975) #30	HPCAL1 (ENSSHBG00005007002) #31	ODC1 (ENSSHBG00005007026) #32	NOL10 (ENSSHBG00005007121) #33	ATP6V1C2 (ENSSHBG00005007157) #34	PDIA6 (ENSSHBG00005007211) #35	KCNF1 (ENSSHBG00005007231)	C2orf50 (ENSSHBG00005007249)
Golden eagle	MODERN SPECIES	6	TRAPPC12 (ENSACCG00020004825)	ADI1 (ENSACCG00020004813)	RNASEH1 (ENSACCG00020004806)	RPS7 (ENSACCG00020004797)	COLEC11 (ENSACCG00020004791)	SOX11 (ENSACCG00020004781)	CMPK2 (ENSACCG00020004778)	RSAD2 (ENSACCG00020004774)	RNF144A (ENSACCG00020004762)	ENSACCG00020004746	ID2 (ENSACCG00020004736)	KIDINS220 (ENSACCG00020014291)	MBOAT2 (ENSACCG00020014234)	ASAP2 (ENSACCG00020013669) #19	ITGB1BP1 (ENSACCG00020012708) #21	CPSF3 (ENSACCG00020012650) #22	IAH1 (ENSACCG00020012620) #23	ADAM17 (ENSACCG00020012584) #24	YWHAQ (ENSACCG00020012565) #25	TAF1B (ENSACCG00020012536) #27	ENSACCG00020012519 #28	KLF11 (ENSACCG00020012500) #29	RRM2 (ENSACCG00020012338) #30	HPCAL1 (ENSACCG00020012207) #31	ODC1 (ENSACCG00020012187) #32	NOL10 (ENSACCG00020012136) #33	ATP6V1C2 (ENSACCG00020012041) #34	PDIA6 (ENSACCG00020011924) #35	KCNF1 (ENSACCG00020011878)	C2orf50 (ENSACCG00020011859)	SLC66A3 (ENSACCG00020011809) #37
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Chicken	MODERN SPECIES	22	ADI1 (ENSGALG00010003471)	RNASEH1 (ENSGALG00010002291)	RPS7 (ENSGALG00010003474)	COLEC11 (ENSGALG00010003478)	SOX11 (ENSGALG00010003543)	CMPK2 (ENSGALG00010002380)	RSAD2 (ENSGALG00010003583)	RNF144A (ENSGALG00010003597)	ENSGALG00010003853	ID2 (ENSGALG00010003117)	KIDINS220 (ENSGALG00010003160)	MBOAT2 (ENSGALG00010003201)	ASAP2 (ENSGALG00010003242) #19	ENSGALG00010003244	ITGB1BP1 (ENSGALG00010003253) #21	CPSF3 (ENSGALG00010003272) #22	IAH1 (ENSGALG00010003295) #23	ADAM17 (ENSGALG00010003348) #24	YWHAQ (ENSGALG00010003375) #25	TAF1B (ENSGALG00010004230) #27	GRHL1 (ENSGALG00010002433) #28	KLF11 (ENSGALG00010002444) #29	RRM2 (ENSGALG00010002462) #30	HPCAL1 (ENSGALG00010002474) #31	ODC (ENSGALG00010003604) #32	NOL10 (ENSGALG00010003525) #33	ATP6V1C2 (ENSGALG00010002590) #34	PDIA6 (ENSGALG00010002609) #35	KCNF1 (ENSGALG00010002644)	C2orf50 (ENSGALG00010002657)	SLC66A3 (ENSGALG00010002673) #37
Turkey	MODERN SPECIES	11	ENSMGAG00000015960	ENSMGAG00000014013 #34	ENSMGAG00000014014 #35	ENSMGAG00000014012 #33	ENSMGAG00000020117 #33	ENSMGAG00000014011 #32	ENSMGAG00000014010 #31	ENSMGAG00000014009 #30	ENSMGAG00000014008 #29	ENSMGAG00000017891 #28	ENSMGAG00000014007 #28	TAF1B (ENSMGAG00000014006) #27	ENSMGAG00000018898 ##25	ENSMGAG00000014000 #24	ENSMGAG00000014004 #25	CPSF3 (ENSMGAG00000013995) #22	ENSMGAG00000013988 #19	ENSMGAG00000013993 #21	ENSMGAG00000017593	ID2 (ENSMGAG00000013985)	ENSMGAG00000013984	ENSMGAG00000019604	ENSMGAG00000013982	ENSMGAG00000019338	ENSMGAG00000013980	RPS7 (ENSMGAG00000013978)	ENSMGAG00000013979	ENSMGAG00000013977	ENSMGAG00000013975	ENSMGAG00000013974	TRIB2 (ENSMGAG00000019802)
Japanese quail	MODERN SPECIES	21	EIPR1 (ENSCJPG00005008562)	TRAPPC12 (ENSCJPG00005008564)	ADI1 (ENSCJPG00005008568)	RNASEH1 (ENSCJPG00005008569)	RPS7 (ENSCJPG00005008570)	COLEC11 (ENSCJPG00005008571)	SOX11 (ENSCJPG00005008603)	CMPK2 (ENSCJPG00005008614)	RSAD2 (ENSCJPG00005008615)	RNF144A (ENSCJPG00005008634)	Id2 (ENSCJPG00005008665)	KIDINS220 (ENSCJPG00005008683)	MBOAT2 (ENSCJPG00005011009)	ASAP2 (ENSCJPG00005011015) #19	ITGB1BP1 (ENSCJPG00005011017) #21	CPSF3 (ENSCJPG00005011027) #22	IAH1 (ENSCJPG00005011028) #23	ADAM17 (ENSCJPG00005011030) #24	YWHAQ (ENSCJPG00005011031) #25	TAF1B (ENSCJPG00005011032) #27	GRHL1 (ENSCJPG00005011034) #28	KLF11 (ENSCJPG00005011036) #29	ENSCJPG00005011037	RRM2 (ENSCJPG00005011038) #30	HPCAL1 (ENSCJPG00005011043) #31	ODC1 (ENSCJPG00005011044) #32	NOL10 (ENSCJPG00005011045) #33	ATP6V1C2 (ENSCJPG00005011046) #34	PDIA6 (ENSCJPG00005011047) #35	KCNF1 (ENSCJPG00005011049)	C2orf50 (ENSCJPG00005011052)
Anatidae	DUPLICATION
Anatidae	ANCESTRAL SPECIES																	ENSGT00940000155699.g #22
Duck	MODERN SPECIES	494																ENSAPLG00000016825 #22
Anatidae	ANCESTRAL SPECIES		ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623.a #19	ENSGT00390000003990 #21	ENSGT00940000155699.h #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT01000000216411	ENSGT00940000154459.B
Pink-footed goose	MODERN SPECIES	48	ADI1 (ENSABRG00000009028)	RNASEH1 (ENSABRG00000009041)	RPS7 (ENSABRG00000009056)	COLEC11 (ENSABRG00000009065)	SOX11 (ENSABRG00000009128)	CMPK2 (ENSABRG00000009165)	RSAD2 (ENSABRG00000009173)	RNF144A (ENSABRG00000009186)	ENSABRG00000009192	ENSABRG00000009198	ID2 (ENSABRG00000009225)	KIDINS220 (ENSABRG00000009278)	MBOAT2 (ENSABRG00000009397)	ASAP2 (ENSABRG00000009432) #19	ITGB1BP1 (ENSABRG00000009505) #21	CPSF3 (ENSABRG00000009595) #22	IAH1 (ENSABRG00000010649) #23	ADAM17 (ENSABRG00000010665) #24	YWHAQ (ENSABRG00000010695) #25	TAF1B (ENSABRG00000010705) #27	GRHL1 (ENSABRG00000010717) #28	KLF11 (ENSABRG00000010724) #29	RRM2 (ENSABRG00000010731) #30	HPCAL1 (ENSABRG00000010754) #31	ODC1 (ENSABRG00000010758) #32	NOL10 (ENSABRG00000010777) #33	ATP6V1C2 (ENSABRG00000010781) #34	PDIA6 (ENSABRG00000010799) #35	KCNF1 (ENSABRG00000010814)	ENSABRG00000010830	C2orf50 (ENSABRG00000010843)
Duck	MODERN SPECIES	21	TRAPPC12 (ENSAPLG00000000576)	ADI1 (ENSAPLG00000001901)	RNASEH1 (ENSAPLG00000001961)	RPS7 (ENSAPLG00000002438)	COLEC11 (ENSAPLG00000025748)	SOX11 (ENSAPLG00000025127)	ENSAPLG00000017954	ENSAPLG00000022011	RSAD2 (ENSAPLG00000006016)	RNF144A (ENSAPLG00000006187)	ID2 (ENSAPLG00000020880)	KIDINS220 (ENSAPLG00000015856)	MBOAT2 (ENSAPLG00000015705)	ASAP2 (ENSAPLG00000006573) #19	ITGB1BP1 (ENSAPLG00000006929) #21	CPSF3 (ENSAPLG00000006941) #22	IAH1 (ENSAPLG00000007422) #23	ADAM17 (ENSAPLG00000007716) #24	YWHAQ (ENSAPLG00000023697) #25	TAF1B (ENSAPLG00000008537) #27	GRHL1 (ENSAPLG00000008667) #28	KLF11 (ENSAPLG00000009146) #29	ENSAPLG00000030281	RRM2 (ENSAPLG00000009301) #30	ODC1 (ENSAPLG00000009531) #32	NOL10 (ENSAPLG00000009885) #33	ATP6V1C2 (ENSAPLG00000010549) #34	PDIA6 (ENSAPLG00000010864) #35	ENSAPLG00000027989	ENSAPLG00000001506	C2orf50 (ENSAPLG00000011213)
Anura	ANCESTRAL SPECIES	32		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213	ENSGT00940000154459.B	ENSGT00940000153916.B #37
Frog	MODERN SPECIES	5	rps7 (ENSXETG00000001209)	colec11 (ENSXETG00000001204)	allc (ENSXETG00000001201)	ENSXETG00000042475	sox11 (ENSXETG00000038964)	ENSXETG00000042607	cmpk2 (ENSXETG00000023437)	ENSXETG00000046085	rsad2 (ENSXETG00000023435)	rnf144a (ENSXETG00000023433)	id2 (ENSXETG00000040416)	kidins220 (ENSXETG00000008271)	mboat2 (ENSXETG00000036035)	asap2 (ENSXETG00000008265) #19	itgb1bp1 (ENSXETG00000008264) #21	cpsf3 (ENSXETG00000008263) #22	iah1 (ENSXETG00000026506) #23	adam17 (ENSXETG00000008262) #24	ywhaq (ENSXETG00000007010) #25	taf1b (ENSXETG00000007011) #27	grhl1 (ENSXETG00000007012) #28	klf11 (ENSXETG00000007013) #29	MGC147302 (ENSXETG00000031276)	rrm2.2 (ENSXETG00000036052) #30	ENSXETG00000043226	hpcal1 (ENSXETG00000003521) #31	odc1 (ENSXETG00000003519) #32	nol10 (ENSXETG00000003518) #33	atp6v1c2 (ENSXETG00000003516) #34	pdia6 (ENSXETG00000003512) #35	KCNF1 (ENSXETG00000003508)
Leishan spiny toad	MODERN SPECIES	7	KCNF1 (ENSLLEG00000022578)	ENSLLEG00000022561	RNF144A (ENSLLEG00000022290)	RSAD2 (ENSLLEG00000022201)	ENSLLEG00000022143	ENSLLEG00000022123	ENSLLEG00000022091	ID2 (ENSLLEG00000021970)	ENSLLEG00000021946	ENSLLEG00000021889	KIDINS220 (ENSLLEG00000021372)	MBOAT2 (ENSLLEG00000021230)	ASAP2 (ENSLLEG00000019352) #19	ENSLLEG00000019276	ITGB1BP1 (ENSLLEG00000019225) #21	CPSF3 (ENSLLEG00000018593) #22	IAH1 (ENSLLEG00000018504) #23	ENSLLEG00000018485	ADAM17 (ENSLLEG00000017494) #24	YWHAQ (ENSLLEG00000017369) #25	ENSLLEG00000017339	TAF1B (ENSLLEG00000016913) #27	GRHL1 (ENSLLEG00000016275) #28	KLF11 (ENSLLEG00000016184) #29	RRM2 (ENSLLEG00000015723) #30	COPS9 (ENSLLEG00000015618)	ENSLLEG00000015595	ENSLLEG00000015564	ENSLLEG00000015548	ENSLLEG00000015508	ENSLLEG00000015438
Coelacanth	MODERN SPECIES	1675													E2F6 (ENSLACG00000003098)	ASAP2 (ENSLACG00000006201) #19	ITGB1BP1 (ENSLACG00000008015) #21	CPSF3 (ENSLACG00000008308) #22	IAH1 (ENSLACG00000022480) #23	ADAM17 (ENSLACG00000009394) #24	ENSLACG00000010467
Actinopterygii	ANCESTRAL SPECIES	161	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155734	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.a ##25	ENSGT00440000033827 #27
Reedfish	MODERN SPECIES	11	rnaseh1 (ENSECRG00000010293)	rps7 (ENSECRG00000010266)	colec11 (ENSECRG00000010258)	allc (ENSECRG00000010240)	ENSECRG00000010212	sox11a (ENSECRG00000010200)	CMPK2 (ENSECRG00000010193)	rsad2 (ENSECRG00000010187)	rnf144aa (ENSECRG00000010177)	id2a (ENSECRG00000010167)	kidins220b (ENSECRG00000010109)	mboat2b (ENSECRG00000010060)	e2f6 (ENSECRG00000010036)	asap2a (ENSECRG00000009968) #19	itgb1bp1 (ENSECRG00000009944) #21	cpsf3 (ENSECRG00000009905) #22	iah1 (ENSECRG00000009882) #23	ywhaqb (ENSECRG00000009863) ##25	adam17a (ENSECRG00000009845) #24	taf1b (ENSECRG00000009821) #27	grhl1 (ENSECRG00000009767) #28	klf11a (ENSECRG00000009752) #29	rrm2 (ENSECRG00000009736) #30	ENSECRG00000009725	ENSECRG00000009717	hpcal1 (ENSECRG00000009705) #31	odc1 (ENSECRG00000009691) #32	nol10 (ENSECRG00000009627) #33	ATP6V1C2 (ENSECRG00000009572) #34	pdia6 (ENSECRG00000009551) #35	kcnf1a (ENSECRG00000009544)
Neopterygii	ANCESTRAL SPECIES	150	ENSGT00940000159468	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b	ENSGT00940000155734	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27
Spotted gar	MODERN SPECIES	647	ENSLOCG00000016801	zgc:112001 (ENSLOCG00000018007)	ENSLOCG00000016802	LRFN2 (ENSLOCG00000016804)	ENSLOCG00000016805	sox11a (ENSLOCG00000018008)	CMPK2 (ENSLOCG00000016807)	rsad2 (ENSLOCG00000016810)	rnf144aa (ENSLOCG00000016812)	id2a (ENSLOCG00000016814)	kidins220b (ENSLOCG00000016815)	mboat2b (ENSLOCG00000016816)	e2f6 (ENSLOCG00000016817)	asap2a (ENSLOCG00000016818) #19	itgb1bp1 (ENSLOCG00000016822) #21	cpsf3 (ENSLOCG00000016823) #22	iah1 (ENSLOCG00000016826) #23	adam17a (ENSLOCG00000016828) #24	ywhaqa (ENSLOCG00000016833) ##25	taf1b (ENSLOCG00000016834) #27	grhl1 (ENSLOCG00000016835) #28	klf11a (ENSLOCG00000016837) #29	rrm2 (ENSLOCG00000016838) #30	LGALS8 (ENSLOCG00000016840)	zdhhc14 (ENSLOCG00000016842)	tmem242 (ENSLOCG00000016844)	arid1b (ENSLOCG00000016845)	ENSLOCG00000016847	NOX3 (ENSLOCG00000016849)	tfb1m (ENSLOCG00000016850)	TIAM2 (ENSLOCG00000016852)
Osteoglossocephalai	ANCESTRAL SPECIES	69	ENSGT01010000222287.B.b.a.b.b.a	ENSGT00530000063503.a.b.g.a	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00940000155699 #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00800000125320	ENSGT00950000183024.a.a.b.r	ENSGT00390000001588	ENSGT00500000045333	ENSGT00940000155999.e.b	ENSGT00940000159137.b.b
Osteoglossiformes	ANCESTRAL SPECIES	11	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464.r	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000155699 #22	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.a	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00530000063946.b.f	ENSGT00940000163429.A	ENSGT00940000163429.D.fc	ENSGT00950000183024.a.a.b.r	ENSGT00390000001588
P. kingsleyae	MODERN SPECIES	218														dicp3.3 (ENSPKIG00000023690)	ENSPKIG00000023680	cpsf3 (ENSPKIG00000023646) #22	ywhaqa (ENSPKIG00000023611) ##25	taf1b (ENSPKIG00000023574) #27	klf11a (ENSPKIG00000023557) #29	rrm2 (ENSPKIG00000023532) #30	LGALS8 (ENSPKIG00000023498)	ENSPKIG00000023483	zdhhc14 (ENSPKIG00000023469)	tmem242 (ENSPKIG00000023456)	arid1b (ENSPKIG00000023438)	ENSPKIG00000023425	CLDN20 (ENSPKIG00000023415)	ENSPKIG00000023387	ENSPKIG00000023316	ipcef1 (ENSPKIG00000023280)	ENSPKIG00000023264
Asian bonytongue	MODERN SPECIES		ccr6a (ENSSFOG00015003027)	cep43 (ENSSFOG00015002963)	zgc:113142 (ENSSFOG00015002820)	myt1la (ENSSFOG00015002763) #16	rnaseh1 (ENSSFOG00015002709)	rps7 (ENSSFOG00015032644)	allc (ENSSFOG00015002644)	sox11b (ENSSFOG00015002596)	ENSSFOG00015002564	ID2 (ENSSFOG00015002554)	kidins220b (ENSSFOG00015002438)	kidins220b (ENSSFOG00015024902)	mboat2b (ENSSFOG00015002370)	e2f6 (ENSSFOG00015002345)	ASAP2 (ENSSFOG00015002216) #19	cpsf3 (ENSSFOG00015002108) #22	ENSSFOG00015027678 ##25	taf1b (ENSSFOG00015002036) #27	ENSSFOG00015001947	rrm2 (ENSSFOG00015001895) #30	LGALS8 (ENSSFOG00015001836)	zdhhc14 (ENSSFOG00015001736)	TMEM242 (ENSSFOG00015033036)	arid1b (ENSSFOG00015001640)	CLDN20 (ENSSFOG00015001626)	TIAM2 (ENSSFOG00015001613)	ENSSFOG00015001607	ENSSFOG00015001543	PRKD3 (ENSSFOG00015001426)	ndufaf7 (ENSSFOG00015001363)	cebpz (ENSSFOG00015001353)
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	1	ENSGT00940000156078.c	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000163429.A	ENSGT00940000163429.C
Euteleosteomorpha	ANCESTRAL SPECIES	8		ENSGT00940000154644.jb.b	ENSGT00940000157359	ENSGT00940000158992	ENSGT00390000004313	ENSGT00390000005242	ENSGT00940000153592.A.a	ENSGT00940000157913.b.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.a.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000163429.A	ENSGT00940000163429.C
Protacanthopterygii	ANCESTRAL SPECIES	33																ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.a.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000163429.B	ENSGT00800000125320	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000163429.A	ENSGT00940000163429.C
Salmoninae	ANCESTRAL SPECIES	152								ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b	ENSGT00940000156714.b.f	ENSGT01030000234564.a.a.a.a.b.b.a.a	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d.i #24	ENSGT01090000260040.b.b.b.a.m.a.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612.b.a #28	ENSGT00940000155982.e.b.g #29	ENSGT00390000013305.a.a.d #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.w.a	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c	ENSGT00940000161252.h.l	ENSGT00940000157012.l.c	ENSGT00940000163429.C.b	ENSGT00950000183024.a.a.b.r.b
Huchen	MODERN SPECIES	50									ENSHHUG00000023149	ENSHHUG00000023161	id2b (ENSHHUG00000023162)	kidins220b (ENSHHUG00000023174)	MBOAT2 (ENSHHUG00000023374)	e2f6 (ENSHHUG00000023398)	ASAP2 (ENSHHUG00000023420) #19	cpsf3 (ENSHHUG00000023661) #22	ADAM17 (ENSHHUG00000023751) #24	ENSHHUG00000024054 ##25	taf1b (ENSHHUG00000024093) #27	GRHL1 (ENSHHUG00000024127) #28	klf11a (ENSHHUG00000024133) #29	RRM2 (ENSHHUG00000024152) #30	LGALS8 (ENSHHUG00000024294)	zdhhc14 (ENSHHUG00000024302)	tmem242 (ENSHHUG00000024309)	arid1b (ENSHHUG00000024315)	CLDN20 (ENSHHUG00000024324)	TIAM2 (ENSHHUG00000024329)	cnksr3 (ENSHHUG00000024360)	PRKD3 (ENSHHUG00000024371)	ndufaf7 (ENSHHUG00000024766)
Salmoninae_a	ANCESTRAL SPECIES	23								ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b	ENSGT00940000156714.b.f	ENSGT01030000234564.a.a.a.a.b.b.a.a	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d.i #24	ENSGT01090000260040.b.b.b.a.m.a.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612.b.a #28	ENSGT00940000155982.e.b.g #29	ENSGT00390000013305.a.a.d #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c	ENSGT00940000161252.h.l	ENSGT00940000157012.l.c	ENSGT00940000163429.C.b	ENSGT00950000183024.a.a.b.r.b	ENSGT00390000001588.p
Oncorhynchus	ANCESTRAL SPECIES	25	ENSGT00400000022349.d	ENSGT00390000013762.b.a.a.a.b	ENSGT00940000159120.f.d	ENSGT00940000157927.i	ENSGT01020000230401.a.a.a.d	ENSGT00940000163080.a.f	ENSGT00550000074807.d.a.a.a.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b	ENSGT00940000156714.b.f	ENSGT01030000234564.a.a.a.a.b.b.a.a	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d.i #24	ENSGT01090000260040.b.b.b.a.m.a.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612.b.a #28	ENSGT00940000155982.e.b.g #29	ENSGT00390000013305.a.a.d #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c	ENSGT00940000161252.h.l	ENSGT00940000157012.l.c	ENSGT00940000163429.C.b	ENSGT00950000183024.a.a.b.r.b	ENSGT00390000001588.p
Oncorhynchus_a	ANCESTRAL SPECIES	17	ENSGT00390000016465	ENSGT00400000022349.d	ENSGT00390000013762.b.a.a.a.b	ENSGT00940000159120.f.d	ENSGT00940000157927.i	ENSGT01020000230401.a.a.a.d	ENSGT00940000163080.a.f	ENSGT00550000074807.d.a.a.a.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00990000204094.c.a.a	ENSGT00940000156464.mb.a.b	ENSGT00940000156714.b.f	ENSGT01030000234564.a.a.a.a.b.b.a.a	ENSGT00940000155734	ENSGT00940000155623.ib.b.a #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d.i #24	ENSGT01090000260040.b.b.b.a.m.a.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612.b.a #28	ENSGT00940000155982.e.b.g #29	ENSGT00390000013305.a.a.d #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.x	ENSGT00940000155634.q.b.c	ENSGT00940000161252.h.l	ENSGT00940000157012.l.c	ENSGT00940000163429.C.b	ENSGT00950000183024.a.a.b.r.b	ENSGT00390000001588.p
Chinook salmon	MODERN SPECIES	9	rnf8 (ENSOTSG00005002084)	tmem151ba (ENSOTSG00005002279)	nfkbie (ENSOTSG00005002283)	slc35b2 (ENSOTSG00005002289)	hsp90ab1 (ENSOTSG00005002318)	nfkbiaa (ENSOTSG00005003896)	psma6b (ENSOTSG00005003898)	sox11b (ENSOTSG00005003905)	ENSOTSG00005003907	ENSOTSG00005003908	id2b (ENSOTSG00005003909)	kidins220b (ENSOTSG00005003919)	mboat2b (ENSOTSG00005003933)	e2f6 (ENSOTSG00005003935)	ASAP2 (ENSOTSG00005003996) #19	cpsf3 (ENSOTSG00005011109) #22	ADAM17 (ENSOTSG00005012037) #24	ENSOTSG00005015416 ##25	taf1b (ENSOTSG00005015417) #27	GRHL1 (ENSOTSG00005015418) #28	ENSOTSG00005015419	klf11a (ENSOTSG00005015420) #29	RRM2 (ENSOTSG00005015421) #30	LGALS8 (ENSOTSG00005016467)	zdhhc14 (ENSOTSG00005016470)	tmem242 (ENSOTSG00005016471)	arid1b (ENSOTSG00005016477)	ENSOTSG00005016480	CLDN20 (ENSOTSG00005016482)	ENSOTSG00005016486	cnksr3 (ENSOTSG00005016520)
Coho salmon	MODERN SPECIES	13	ENSOKIG00005030955	aida (ENSOKIG00005030994)	rnf8 (ENSOKIG00005031006)	tmem151ba (ENSOKIG00005031075)	nfkbie (ENSOKIG00005031083)	slc35b2 (ENSOKIG00005031109)	hsp90ab1 (ENSOKIG00005031181)	ENSOKIG00005032343	PSMA6 (ENSOKIG00005032399)	sox11b (ENSOKIG00005032433)	id2b (ENSOKIG00005032439)	kidins220b (ENSOKIG00005032461)	mboat2b (ENSOKIG00005032655)	e2f6 (ENSOKIG00005032718)	ASAP2 (ENSOKIG00005032844) #19	cpsf3 (ENSOKIG00005034078) #22	ADAM17 (ENSOKIG00005034365) #24	ENSOKIG00005036784 ##25	taf1b (ENSOKIG00005036800) #27	klf11a (ENSOKIG00005036821) #29	RRM2 (ENSOKIG00005036867) #30	LGALS8 (ENSOKIG00005037486)	zdhhc14 (ENSOKIG00005037548)	tmem242 (ENSOKIG00005037575)	arid1b (ENSOKIG00005037606)	CLDN20 (ENSOKIG00005037936)	TIAM2 (ENSOKIG00005037962)	ENSOKIG00005038262	ENSOKIG00005038496	CEBPZ (ENSOKIG00005041953)	FOXA2 (ENSOKIG00005042182)
Rainbow trout	MODERN SPECIES	25	slc35b2 (ENSOMYG00000002103)	hsp90bb (ENSOMYG00000002804)	ENSOMYG00000003396	ENSOMYG00000003459	sox11b (ENSOMYG00000003505)	ENSOMYG00000057208	ENSOMYG00000067987	ENSOMYG00000064901	ENSOMYG00000003530	id2b (ENSOMYG00000003555)	kidins220b (ENSOMYG00000003863)	mboat2b (ENSOMYG00000003933)	e2f6 (ENSOMYG00000003946)	ASAP2 (ENSOMYG00000004895) #19	ENSOMYG00000053980	cpsf3 (ENSOMYG00000005764) #22	ADAM17 (ENSOMYG00000007729) #24	ywhaqa (ENSOMYG00000009438) ##25	ENSOMYG00000072499	ENSOMYG00000046721	taf1b (ENSOMYG00000077298) #27	GRHL1 (ENSOMYG00000009524) #28	klf11a (ENSOMYG00000009549) #29	RRM2 (ENSOMYG00000009693) #30	ENSOMYG00000010358	zdhhc14 (ENSOMYG00000010383)	ENSOMYG00000070397	tmem242 (ENSOMYG00000010405)	arid1b (ENSOMYG00000010596)	CLDN20 (ENSOMYG00000010979)	TIAM2 (ENSOMYG00000010992)
Salmo	ANCESTRAL SPECIES	12	ENSGT01030000234517.H.a.f	ENSGT00530000063867.a.a.db	ENSGT00530000063867.a.b.m.b	ENSGT00950000183136.a.b.f	ENSGT00940000155144.n.t	ENSGT00940000156671.l.b.a	ENSGT00940000155490.a.c.a.c.b	ENSGT00940000154045.b.d.a	ENSGT00940000161652.b.b.p.b.b	ENSGT00940000157701.k.b	ENSGT00940000156464.mb.a.b	ENSGT00940000156714.b.f	ENSGT01030000234564.a.a.a.a.b.b.a.a	ENSGT00940000155734.kb	ENSGT00940000155623.ib.b.a #19	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d.i #24	ENSGT01090000260040.b.b.b.a.m.a.b.a ##25	ENSGT00440000033827 #27	ENSGT00940000157612.b.a #28	ENSGT00940000155982.e.b.g #29	ENSGT00390000013305.a.a.d #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.f	ENSGT00390000008642.w.a	ENSGT00940000155634.q.b.c	ENSGT00940000161252.h.l	ENSGT00940000157012.l.c	ENSGT00940000163429.C.b	ENSGT00950000183024.a.a.b.r.b	ENSGT00390000001588.p
Atlantic salmon	MODERN SPECIES	25	cdc42bpb (ENSSSAG00000022058)	ENSSSAG00000067479	ENSSSAG00000087136	ENSSSAG00000120792	ENSSSAG00000067588	ENSSSAG00000072133	ENSSSAG00000072139	ENSSSAG00000121038	ENSSSAG00000088329	sox11b (ENSSSAG00000072143)	ENSSSAG00000072144	kidins220b (ENSSSAG00000072151)	mboat2b (ENSSSAG00000072254)	e2f6 (ENSSSAG00000072278)	ASAP2 (ENSSSAG00000072347) #19	cpsf3 (ENSSSAG00000073096) #22	ADAM17 (ENSSSAG00000073233) #24	ywhaqa (ENSSSAG00000075607) ##25	GRHL1 (ENSSSAG00000075614) #28	klf11a (ENSSSAG00000075644) #29	rrm2 (ENSSSAG00000083858) #30	lgals8a (ENSSSAG00000112692)	zdhhc14 (ENSSSAG00000075847)	arid1b (ENSSSAG00000075859)	CLDN20 (ENSSSAG00000102040)	TIAM2 (ENSSSAG00000075929)	ENSSSAG00000075966	PRKD3 (ENSSSAG00000075988)	ENSSSAG00000076174	CEBPZ (ENSSSAG00000076185)	FOXA2 (ENSSSAG00000076197)
River trout	MODERN SPECIES		si:dkey-177p2.6 (ENSSTUG00000037358)	cdca4 (ENSSTUG00000037357)	ENSSTUG00000037355	ahsa1a (ENSSTUG00000037323)	sel1l (ENSSTUG00000034678)	ENSSTUG00000034582	nudt14 (ENSSTUG00000034575)	sox11b (ENSSTUG00000034561)	ENSSTUG00000034552	ENSSTUG00000034533	id2b (ENSSTUG00000034522)	kidins220b (ENSSTUG00000034149)	mboat2b (ENSSTUG00000034052)	e2f6 (ENSSTUG00000034020)	ASAP2 (ENSSTUG00000031636) #19	cpsf3 (ENSSTUG00000031295) #22	ADAM17 (ENSSTUG00000028571) #24	ENSSTUG00000028499 ##25	taf1b (ENSSTUG00000028460) #27	klf11a (ENSSTUG00000028441) #29	RRM2 (ENSSTUG00000027410) #30	LGALS8 (ENSSTUG00000027376)	zdhhc14 (ENSSTUG00000027365)	tmem242 (ENSSTUG00000027359)	arid1b (ENSSTUG00000027017)	CLDN20 (ENSSTUG00000026989)	ENSSTUG00000026876	cnksr3 (ENSSTUG00000026824)	PRKD3 (ENSSTUG00000026310)	ndufaf7 (ENSSTUG00000026236)	CEBPZ (ENSSTUG00000026199)
Northern pike	MODERN SPECIES	17	cand1 (ENSELUG00000013248)	ENSELUG00000013276	dyrk2 (ENSELUG00000000482)	ENSELUG00000031636	ifng1 (ENSELUG00000013327)	ENSELUG00000013337	ENSELUG00000013370	MDM1 (ENSELUG00000013414)	ENSELUG00000025357	rap1b (ENSELUG00000013516)	nup107 (ENSELUG00000013560)	slc35e3 (ENSELUG00000013570)	mdm2 (ENSELUG00000013606)	cpm (ENSELUG00000013662)	b2ml (ENSELUG00000013704)	cpsf3 (ENSELUG00000013775) #22	ADAM17 (ENSELUG00000013882) #24	ENSELUG00000013909 ##25	ADAM17 (ENSELUG00000026373) #24	ENSELUG00000001295 #24	taf1b (ENSELUG00000000511) #27	GRHL1 (ENSELUG00000014062) #28	klf11a (ENSELUG00000014101) #29	rrm2 (ENSELUG00000014215) #30	LGALS8 (ENSELUG00000001398)	zdhhc14 (ENSELUG00000014314)	tmem242 (ENSELUG00000034510)	arid1b (ENSELUG00000014567)	CLDN20 (ENSELUG00000014633)	TIAM2 (ENSELUG00000014740)	ENSELUG00000014809
Acanthomorphata	ANCESTRAL SPECIES	184			ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000177938	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l
Euacanthomorphacea	ANCESTRAL SPECIES	102									ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000155734	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT01100000263529.a.a.a.a.a.c.a	ENSGT00940000154395.a.a.b.b.g.b	ENSGT00940000162312	ENSGT01100000263547.a.b.b.a.a.a.a.b
Percomorphaceae	ANCESTRAL SPECIES	59								ENSGT00390000001793	ENSGT00940000161652.b.a	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00390000007441	ENSGT01030000234667.b.f.a	ENSGT00940000161983.b	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00390000007473	ENSGT00940000173241	ENSGT00390000017610.b	ENSGT00940000155490.a.c.a	ENSGT00940000155490.a.c.b
Tiger tail seahorse	MODERN SPECIES	465	eif2b4 (ENSHCOG00000006727)	ENSHCOG00000006754	ENSHCOG00000006767	ENSHCOG00000006789	ENSHCOG00000006820	ENSHCOG00000006840	COX7A2 (ENSHCOG00000006862)	ENSHCOG00000000595	zbtb1 (ENSHCOG00000007087)	ZBTB25 (ENSHCOG00000007094)	ENSHCOG00000007109	ENSHCOG00000007118	kidins220b (ENSHCOG00000000223)	ENSHCOG00000000229	ENSHCOG00000007192 #19	cpsf3 (ENSHCOG00000007251) #22	ADAM17 (ENSHCOG00000007264) #24	taf1b (ENSHCOG00000000234) #27	klf11a (ENSHCOG00000000673) #29	RRM2 (ENSHCOG00000000242) #30	ENSHCOG00000007346	ENSHCOG00000007365 #30	ENSHCOG00000007373	ubr7 (ENSHCOG00000007377)	ASB2 (ENSHCOG00000007421)	sec63 (ENSHCOG00000007466)	iyd (ENSHCOG00000007479)	ppp1r14c (ENSHCOG00000007490)	ENSHCOG00000007512	armc1l (ENSHCOG00000007533)	mtfr2 (ENSHCOG00000007539)
Percomorphaceae_B	ANCESTRAL SPECIES	18	ENSGT00940000156528.d	ENSGT00940000163520.A.a.a.a.b.b	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Percomorphaceae_C	ANCESTRAL SPECIES	19	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a
Eupercaria	ANCESTRAL SPECIES	16	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a	ENSGT00940000157418.a	ENSGT00940000160083
Tetraodontidae	ANCESTRAL SPECIES	36	ENSGT01030000234613.b.a.a.c.b	ENSGT00940000157058.k	ENSGT00940000156521.b	ENSGT00940000164935.b	ENSGT00940000156528.d	ENSGT00940000167286	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000156714.b	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00510000048539	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30
Tetraodon	MODERN SPECIES	5	prph2lb (ENSTNIG00000004800)	ckbb (ENSTNIG00000004799)	ENSTNIG00000004798	CEP170B (ENSTNIG00000004797)	ENSTNIG00000000136	ENSTNIG00000004796	ENSTNIG00000004794	zbtb1 (ENSTNIG00000004793)	ENSTNIG00000004792	ENSTNIG00000004791	ccr6a (ENSTNIG00000004790)	ENSTNIG00000001118	kidins220b (ENSTNIG00000002502)	allc (ENSTNIG00000002503)	asap2b (ENSTNIG00000002504)	cpsf3 (ENSTNIG00000002505) #22	ADAM17 (ENSTNIG00000002506) #24	taf1b (ENSTNIG00000002507) #27	klf11a (ENSTNIG00000000881) #29	ENSTNIG00000002508	RRM2 (ENSTNIG00000002509) #30	LGALS8 (ENSTNIG00000002510)	ENSTNIG00000002511 #30	KLF11 (ENSTNIG00000002512) #29	RRM2 (ENSTNIG00000002513) #30	TMEM242 (ENSTNIG00000002514)	ENSTNIG00000002515	ubr7 (ENSTNIG00000002516)	ENSTNIG00000002517	ENSTNIG00000002518	ENSTNIG00000002519
Fugu	MODERN SPECIES	7	pak6b (ENSTRUG00000004444)	ENSTRUG00000029598	myh6 (ENSTRUG00000005019)	zbtb1 (ENSTRUG00000005069)	ENSTRUG00000023261	ENSTRUG00000026080	ccr6 (ENSTRUG00000005295)	ENSTRUG00000005325	kidins220b (ENSTRUG00000005483)	allc (ENSTRUG00000005883)	ENSTRUG00000030000	ENSTRUG00000006091	asap2b (ENSTRUG00000006131)	ENSTRUG00000032240	ENSTRUG00000026033	cpsf3 (ENSTRUG00000007030) #22	ADAM17 (ENSTRUG00000007422) #24	taf1b (ENSTRUG00000007945) #27	klf11a (ENSTRUG00000008202) #29	RRM2 (ENSTRUG00000008284) #30	LGALS8 (ENSTRUG00000029546)	RRM2 (ENSTRUG00000029705) #30	tmem242 (ENSTRUG00000030688)	prrg2 (ENSTRUG00000028431)	gja1b (ENSTRUG00000008716)	serinc1 (ENSTRUG00000008750)	nus1 (ENSTRUG00000028361)	psmc6 (ENSTRUG00000009258)	cgrrf1 (ENSTRUG00000009524)	ENSTRUG00000026315	ube2j1 (ENSTRUG00000033104)
Eupecaria_A	ANCESTRAL SPECIES	16	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a	ENSGT00940000157418.a	ENSGT00940000160083	ENSGT00940000157264
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	760													ENSLBEG00000020729	ENSLBEG00000020710	asap2b (ENSLBEG00000020642)	cpsf3 (ENSLBEG00000020569) #22	ADAM17 (ENSLBEG00000020511) #24	taf1b (ENSLBEG00000020446) #27	ENSLBEG00000020415	ENSLBEG00000020401	klf11a (ENSLBEG00000020387) #29
Ballan wrasse	MODERN SPECIES	3566																cpsf3 (ENSLBEG00000015018) #22	ADAM17 (ENSLBEG00000015086) #24
Eupecaria_B	ANCESTRAL SPECIES	16	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a	ENSGT00940000157418.a	ENSGT00940000160083	ENSGT00940000157264
Eupecaria_C	ANCESTRAL SPECIES	16															ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	54															ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
European seabass	MODERN SPECIES	7														ENSDLAG00005030201	ENSDLAG00005026569	cpsf3 (ENSDLAG00005022284) #22	ADAM17 (ENSDLAG00005015560) #24	taf1b (ENSDLAG00005015536) #27	klf11a (ENSDLAG00005031352) #29	ENSDLAG00005033801	ENSDLAG00005002913	ENSDLAG00005000306 #30	ENSDLAG00005033720 #30	zdhhc14 (ENSDLAG00005000257)	TMEM242 (ENSDLAG00005027678)	arid1b (ENSDLAG00005000227)	ENSDLAG00005031773	ENSDLAG00005000200	ENSDLAG00005000190	CLDN20 (ENSDLAG00005029173)	ENSDLAG00005024299
Large yellow croaker	MODERN SPECIES	478	fezf2 (ENSLCRG00005006818)	ENSLCRG00005006817	ptprga (ENSLCRG00005006648)	PLEKHA6 (ENSLCRG00005006009)	KIF26A (ENSLCRG00005006001)	ccr6a (ENSLCRG00005005998)	cep43 (ENSLCRG00005005994)	mboat2b (ENSLCRG00005005984)	kidins220b (ENSLCRG00005005961)	allc (ENSLCRG00005005949)	ENSLCRG00005005948	ENSLCRG00005005946	ENSLCRG00005005943	ENSLCRG00005005941	asap2b (ENSLCRG00005003839)	cpsf3 (ENSLCRG00005003797) #22	ADAM17 (ENSLCRG00005003594) #24	taf1b (ENSLCRG00005003586) #27	klf11a (ENSLCRG00005003582) #29	ENSLCRG00005003580 #30	ENSLCRG00005003574	RRM2 (ENSLCRG00005002838) #30	zdhhc14 (ENSLCRG00005002794)	ENSLCRG00005002788	tmem242 (ENSLCRG00005002784)	ENSLCRG00005002770	ENSLCRG00005002766	ENSLCRG00005002761	CLDN20 (ENSLCRG00005002758)	ENSLCRG00005002752	e2f6 (ENSLCRG00005002742)
Gilthead seabream	MODERN SPECIES	14	xrcc3 (ENSSAUG00010013066)	serpina10a (ENSSAUG00010013063)	ENSSAUG00010013061	ASB2 (ENSSAUG00010013057)	ENSSAUG00010013056	tmem251 (ENSSAUG00010013055)	ENSSAUG00010013054	ubr7 (ENSSAUG00010013049)	ENSSAUG00010013045	ENSSAUG00010013042	ENSSAUG00010013040	ENSSAUG00010013039	ENSSAUG00010013034	ENSSAUG00010013029	asap2b (ENSSAUG00010005703)	cpsf3 (ENSSAUG00010005569) #22	ADAM17 (ENSSAUG00010004966) #24	taf1b (ENSSAUG00010004953) #27	klf11a (ENSSAUG00010004948) #29	mettl22 (ENSSAUG00010004945)	RRM2 (ENSSAUG00010003295) #30	LGALS8 (ENSSAUG00010003274)	RRM2 (ENSSAUG00010003210) #30	zdhhc14 (ENSSAUG00010003203)	tmem242 (ENSSAUG00010003201)	ENSSAUG00010003197	ENSSAUG00010003195	ENSSAUG00010003189	ENSSAUG00010003185	ENSSAUG00010003180	ENSSAUG00010003177
Perciformes	ANCESTRAL SPECIES	14	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a	ENSGT00940000157418.a	ENSGT00940000160083	ENSGT00940000157264
Perciformes_a	ANCESTRAL SPECIES	43	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.r
Pike perch	MODERN SPECIES	105	mboat2b (ENSSLUG00000015406)	kidins220b (ENSSLUG00000015461)	ENSSLUG00000015549	ENSSLUG00000015567	ENSSLUG00000015587	ENSSLUG00000015628	ENSSLUG00000015652	ENSSLUG00000015664	allc (ENSSLUG00000015680)	ENSSLUG00000015748	ENSSLUG00000015757	ENSSLUG00000015768	ENSSLUG00000015776	ENSSLUG00000015782	asap2b (ENSSLUG00000015932)	cpsf3 (ENSSLUG00000017812) #22	ENSSLUG00000018235	ENSSLUG00000018238	ADAM17 (ENSSLUG00000018250) #24	taf1b (ENSSLUG00000018279) #27	klf11a (ENSSLUG00000018285) #29	RRM2 (ENSSLUG00000018297) #30	ENSSLUG00000018333	RRM2 (ENSSLUG00000018473) #30	zdhhc14 (ENSSLUG00000019386)	tmem242 (ENSSLUG00000019390)	ENSSLUG00000013782	ENSSLUG00000013819	ENSSLUG00000013830	ENSSLUG00000013842	ENSSLUG00000013854
Cottioidei	ANCESTRAL SPECIES	50	ENSGT00940000155691.c.b	ENSGT00940000154746.a.b	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000159075.B	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a	ENSGT00940000157418.a	ENSGT00940000160083	ENSGT00940000157264	ENSGT00940000157865
Stickleback	MODERN SPECIES	280														ENSGACG00000001435	ENSGACG00000001439 #19	cpsf3 (ENSGACG00000001440) #22	ADAM17 (ENSGACG00000001465) #24	taf1b (ENSGACG00000001470) #27	klf11a (ENSGACG00000001487) #29	RRM2 (ENSGACG00000001494) #30	ENSGACG00000001502	RRM2 (ENSGACG00000001507) #30
Percomorphaceae_D	ANCESTRAL SPECIES	18	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00940000168667	ENSGT00950000183053.B
Anabantaria	ANCESTRAL SPECIES	24	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00950000183053.B	ENSGT00940000155621	ENSGT00390000011342
Anabantoidei	ANCESTRAL SPECIES	15	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a.g.a	ENSGT00940000161252.h	ENSGT00950000183053.B	ENSGT00940000155621	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a
Climbing perch	MODERN SPECIES	15	ENSATEG00000005323	ENSATEG00000005162	ENSATEG00000004674	ENSATEG00000027868	ENSATEG00000004667	mboat2b (ENSATEG00000004655)	ENSATEG00000004533	ENSATEG00000028189	ENSATEG00000004465	allc (ENSATEG00000004335)	ENSATEG00000028321	ENSATEG00000004248	ENSATEG00000004209	ENSATEG00000004178	ENSATEG00000004049	cpsf3 (ENSATEG00000003959) #22	ADAM17 (ENSATEG00000003880) #24	taf1b (ENSATEG00000003871) #27	ENSATEG00000028853 #30	ENSATEG00000003227	ENSATEG00000027484	tmem242 (ENSATEG00000003522)	ENSATEG00000027292 #29	ENSATEG00000003865 #29	ENSATEG00000028898 #30	ENSATEG00000003648	ENSATEG00000026062 #30	ENSATEG00000029480	zdhhc14 (ENSATEG00000026562)	tmem242 (ENSATEG00000003083)	arid1b (ENSATEG00000003355)
Siamese fighting fish	MODERN SPECIES	13	pak6b (ENSBSLG00000016920)	ENSBSLG00000016875	myh6 (ENSBSLG00000016859)	zbtb1 (ENSBSLG00000016845)	ZBTB25 (ENSBSLG00000016839)	ENSBSLG00000016822	KIF26A (ENSBSLG00000016901)	ENSBSLG00000016581	kidins220b (ENSBSLG00000015709)	ENSBSLG00000015675	mboat2b (ENSBSLG00000015577)	cep43 (ENSBSLG00000015252)	ENSBSLG00000015195	ENSBSLG00000015145	asap2b (ENSBSLG00000014700)	cpsf3 (ENSBSLG00000014394) #22	ADAM17 (ENSBSLG00000014345) #24	taf1b (ENSBSLG00000014312) #27	klf11a (ENSBSLG00000014280) #29	rrm2 (ENSBSLG00000014072) #30	zdhhc14 (ENSBSLG00000013632)	tmem242 (ENSBSLG00000013591)	arid1b (ENSBSLG00000013545)	ENSBSLG00000013521	ENSBSLG00000013500	CLDN20 (ENSBSLG00000013492)	ENSBSLG00000013474	ENSBSLG00000013470	vta1 (ENSBSLG00000013230)	gje1a (ENSBSLG00000013180)	NMBR (ENSBSLG00000013160)
Zig-zag eel	MODERN SPECIES	30	ENSMAMG00000002380	ENSMAMG00000027061	ENSMAMG00000002393	ENSMAMG00000002534	ENSMAMG00000002572	ENSMAMG00000024646	ENSMAMG00000002608	ENSMAMG00000002622	mboat2b (ENSMAMG00000002708)	ENSMAMG00000002753	ENSMAMG00000002840	ENSMAMG00000002845	allc (ENSMAMG00000002895)	ENSMAMG00000002911	ENSMAMG00000002949	cpsf3 (ENSMAMG00000003076) #22	ADAM17 (ENSMAMG00000003165) #24	taf1b (ENSMAMG00000003217) #27	klf11a (ENSMAMG00000003229) #29	ENSMAMG00000027203	RRM2 (ENSMAMG00000003281) #30	ENSMAMG00000028205	ENSMAMG00000003337 #30	zdhhc14 (ENSMAMG00000003363)	tmem242 (ENSMAMG00000027092)	arid1b (ENSMAMG00000003418)	ENSMAMG00000003546	ENSMAMG00000003570	ENSMAMG00000003597	ENSMAMG00000003620	CLDN20 (ENSMAMG00000003636)
Carangaria	ANCESTRAL SPECIES	18	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00940000168667
Pleuronectoidei	ANCESTRAL SPECIES	56	ENSGT00940000157058.k	ENSGT00940000156521.b	ENSGT00940000164935.b	ENSGT00940000156528.d	ENSGT00940000167286	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00940000168667	ENSGT00940000155621	ENSGT00390000011342	ENSGT01090000260098.A	ENSGT01100000263512.b.a
Turbot	MODERN SPECIES	12	ENSSMAG00000029128	ENSSMAG00000036007	zbtb1 (ENSSMAG00000026890)	ENSSMAG00000026065	ENSSMAG00000029617	ENSSMAG00000022158	ENSSMAG00000023241	ENSSMAG00000022841	mboat2b (ENSSMAG00000024083)	kidins220b (ENSSMAG00000032129)	ENSSMAG00000035620	allc (ENSSMAG00000033088)	ENSSMAG00000022286	ENSSMAG00000037489	ENSSMAG00000032655 #19	cpsf3 (ENSSMAG00000026608) #22	ADAM17 (ENSSMAG00000028876) #24	taf1b (ENSSMAG00000024265) #27	klf11a (ENSSMAG00000034639) #29	RRM2 (ENSSMAG00000027650) #30	ENSSMAG00000027127	ENSSMAG00000037802 #30	TMEM242 (ENSSMAG00000009642)	arid1b (ENSSMAG00000009607)	CLDN20 (ENSSMAG00000009601)	TIAM2 (ENSSMAG00000009569)	ENSSMAG00000009558	ENSSMAG00000009545	adgrg6 (ENSSMAG00000009470)	ENSSMAG00000026449	vta1 (ENSSMAG00000028466)
Carangaria_A	ANCESTRAL SPECIES	35	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT01100000263515.a.b.a.b.b.k.b.a.a	ENSGT00940000155691.c.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Seriola	ANCESTRAL SPECIES	4	ENSGT00940000157632	ENSGT00510000049207.a	ENSGT00940000164220.h	ENSGT00940000158595	ENSGT00390000018632	ENSGT00940000156072.a.a	ENSGT01020000230412.B.a	ENSGT00940000160891	ENSGT00940000154473.b	ENSGT00940000154004.b	ENSGT00940000164252.a.a	ENSGT00940000157241	ENSGT00940000153417.B	ENSGT00940000165219	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j.s #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j.t #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Yellowtail amberjack	MODERN SPECIES	3189	ENSSLDG00000007585	clvs2 (ENSSLDG00000007595)	ENSSLDG00000007622	ENSSLDG00000007638	gtf3c2 (ENSSLDG00000007668)	slc30a2 (ENSSLDG00000007709)	ENSSLDG00000007760	mpv17 (ENSSLDG00000007810)	uts1 (ENSSLDG00000007840)	trim54 (ENSSLDG00000007853)	dnajc5ga (ENSSLDG00000007878)	cad (ENSSLDG00000007917)	ift172 (ENSSLDG00000008172)	msraa (ENSSLDG00000008322)	asap2b (ENSSLDG00000008360)	cpsf3 (ENSSLDG00000008469) #22	ADAM17 (ENSSLDG00000008557) #24	taf1b (ENSSLDG00000008618) #27	ENSSLDG00000008662 #30	LGALS8 (ENSSLDG00000008748)	RRM2 (ENSSLDG00000008781) #30	zdhhc14 (ENSSLDG00000008832)	tmem242 (ENSSLDG00000008856)	arid1b (ENSSLDG00000008868)	ENSSLDG00000008909	ENSSLDG00000008952	CLDN20 (ENSSLDG00000008984)
Greater amberjack	MODERN SPECIES	10	ENSSDUG00000003742	gtf3c2 (ENSSDUG00000003669)	slc30a2 (ENSSDUG00000003622)	ENSSDUG00000003611	ENSSDUG00000003598	ENSSDUG00000003586	mpv17 (ENSSDUG00000003552)	uts1 (ENSSDUG00000003543)	trim54 (ENSSDUG00000003512)	dnajc5ga (ENSSDUG00000003494)	cad (ENSSDUG00000003396)	ift172 (ENSSDUG00000003127)	msraa (ENSSDUG00000003072)	ENSSDUG00000003048	asap2b (ENSSDUG00000002927)	cpsf3 (ENSSDUG00000002828) #22	ADAM17 (ENSSDUG00000002739) #24	taf1b (ENSSDUG00000002726) #27	klf11a (ENSSDUG00000002709) #29	RRM2 (ENSSDUG00000002665) #30	LGALS8 (ENSSDUG00000002575)	zdhhc14 (ENSSDUG00000002542)	tmem242 (ENSSDUG00000002516)	arid1b (ENSSDUG00000002475)	ENSSDUG00000002453	ENSSDUG00000002417	ENSSDUG00000002359	CLDN20 (ENSSDUG00000002346)	ENSSDUG00000002323	e2f6 (ENSSDUG00000002306)	ENSSDUG00000002225
Barramundi perch	MODERN SPECIES	523					ENSLCAG00010025833	ccr6a (ENSLCAG00010025835)	ccr6a (ENSLCAG00010025837)	cep43 (ENSLCAG00010025850)	mboat2b (ENSLCAG00010025876)	kidins220b (ENSLCAG00010025908)	allc (ENSLCAG00010025927)	ENSLCAG00010025929	ENSLCAG00010025931	ENSLCAG00010025934	asap2b (ENSLCAG00010025980)	cpsf3 (ENSLCAG00010026075) #22	ADAM17 (ENSLCAG00010026090) #24	taf1b (ENSLCAG00010026119) #27	klf11a (ENSLCAG00010026124) #29	RRM2 (ENSLCAG00010026132) #30	LGALS8 (ENSLCAG00010026151)
Ovalentaria	ANCESTRAL SPECIES	19	ENSGT00940000158912.j.a	ENSGT00940000156528.d	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.a #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Atherinomorphae	ANCESTRAL SPECIES	27	ENSGT00940000156528.d	ENSGT00980000198805	ENSGT00950000183116.b.a.b.a	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621.vc	ENSGT00390000011342	ENSGT01090000260098.A
Cyprinodontiformes	ANCESTRAL SPECIES	14	ENSGT00940000156528.d	ENSGT00940000167286	ENSGT00950000183116.b.a.b.a.e	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.q	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621.vc	ENSGT00390000011342	ENSGT01090000260098.A
Aplocheiloidei	ANCESTRAL SPECIES	95									ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.q	ENSGT00390000007441	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00940000168667	ENSGT00940000155621.vc	ENSGT00390000011342	ENSGT01090000260098.A
Mangrove rivulus	MODERN SPECIES	473									kidins220b (ENSKMAG00000002538)	ENSKMAG00000002586	allc (ENSKMAG00000002598)	ENSKMAG00000002615	ENSKMAG00000002654	ENSKMAG00000002675	asap2b (ENSKMAG00000002710)	cpsf3 (ENSKMAG00000002806) #22	ADAM17 (ENSKMAG00000002823) #24	taf1b (ENSKMAG00000002835) #27	klf11a (ENSKMAG00000002883) #29	RRM2 (ENSKMAG00000002897) #30	ENSKMAG00000002904	RRM2 (ENSKMAG00000002913) #30
Turquoise killifish	MODERN SPECIES	1613	Nfu_g_1_018754 (ENSNFUG00015003436)	PLEKHG3 (ENSNFUG00015003463)	ENSNFUG00015003482	spint1b (ENSNFUG00015003492)	pak6b (ENSNFUG00015003496)	myh6 (ENSNFUG00015003500)	ENSNFUG00015003502	ENSNFUG00015003509	ENSNFUG00015003515	KIF26A (ENSNFUG00015003522)	ENSNFUG00015003537	ccr6a (ENSNFUG00015003538)	cep43 (ENSNFUG00015003540)	allc (ENSNFUG00015003547)	ASAP2B (ENSNFUG00015003583)	cpsf3 (ENSNFUG00015003613) #22	ADAM17B (ENSNFUG00015003637) #24	ENSNFUG00015003672	TAF1B (ENSNFUG00015003677) #27	KLF11A (ENSNFUG00015003683) #29	RRM2 (ENSNFUG00015003694) #30	LGALS8 (ENSNFUG00015003716)	Nfu_g_1_018818 (ENSNFUG00015003744) #30	zdhhc14 (ENSNFUG00015003806)	TMEM242 (ENSNFUG00015003813)	CLDN20 (ENSNFUG00015003823)	ENSNFUG00015003827	E2F6 (ENSNFUG00015003832)	ENSNFUG00015003838	GPR126 (ENSNFUG00015003854)	VTA1 (ENSNFUG00015003883)
Cyprinodontoidei	ANCESTRAL SPECIES	32	ENSGT00950000183116.b.a.b.a.e	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00940000163520.A.a.a.a.b.b.d	ENSGT01030000234667.b.f.a.r	ENSGT01030000234667.b.f.a.q	ENSGT00940000161983.b	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b.e.a	ENSGT00940000160560.b.f.a.a.a	ENSGT00940000160560.b.f.a.a.b.e.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a
NAME_4	ANCESTRAL SPECIES	247					ENSGT00940000159075.B	ENSGT00950000183116.b.a.b.a.e	ENSGT01030000234667.b.f.a.r	ENSGT01030000234667.b.f.a.q	ENSGT00940000161983.b	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b
Mummichog	MODERN SPECIES	578									allc (ENSFHEG00000014294)	ENSFHEG00000014394	ENSFHEG00000014494	ENSFHEG00000014506	ENSFHEG00000014557	ENSFHEG00000014603	asap2b (ENSFHEG00000014683)	cpsf3 (ENSFHEG00000014774) #22	ADAM17 (ENSFHEG00000014812) #24	taf1b (ENSFHEG00000014863) #27	klf11a (ENSFHEG00000014875) #29	rrm2 (ENSFHEG00000014928) #30	LGALS8 (ENSFHEG00000014941)	zdhhc14 (ENSFHEG00000014981)	ENSFHEG00000015004	arid1b (ENSFHEG00000015154)
Sheepshead minnow	MODERN SPECIES	369				ccr6a (ENSCVAG00000022377)	ENSCVAG00000022362	ccr6a (ENSCVAG00000022348)	ENSCVAG00000022342	mboat2b (ENSCVAG00000022323)	kidins220b (ENSCVAG00000022317)	ENSCVAG00000022250	allc (ENSCVAG00000022240)	ENSCVAG00000022182	ENSCVAG00000022161	asap2b (ENSCVAG00000022117)	ENSCVAG00000022058 #22	cpsf3 (ENSCVAG00000022039) #22	ADAM17 (ENSCVAG00000022011) #24	taf1b (ENSCVAG00000021996) #27	klf11a (ENSCVAG00000021958) #29	RRM2 (ENSCVAG00000021949) #30	LGALS8 (ENSCVAG00000021927)	RRM2 (ENSCVAG00000021913) #30	ENSCVAG00000000876	tmem242 (ENSCVAG00000021882)	arid1b (ENSCVAG00000021865)	ENSCVAG00000021837	ENSCVAG00000021815	ENSCVAG00000021786	ENSCVAG00000021764	cotl1 (ENSCVAG00000021313)	klhl36 (ENSCVAG00000021301)
Poeciliinae	ANCESTRAL SPECIES	15	ENSGT00940000156528.d	ENSGT00940000157501	ENSGT00940000159887	ENSGT00940000154746.a.b	ENSGT00940000159075.B	ENSGT00950000183116.b.a.b.a.e	ENSGT01030000234667.b.f.a.r	ENSGT01030000234667.b.f.a.q	ENSGT00940000161983.b	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00970000193439.a.b.b.a	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621.vc
Poecilia	ANCESTRAL SPECIES	9				ENSGT00940000159075.B	ENSGT00950000183116.b.a.b.a.e	ENSGT01030000234667.b.f.a.r	ENSGT01030000234667.b.f.a.q.b	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.q.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00970000193439.a.b.b.a	ENSGT00970000193439.a.a.a	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Guppy	MODERN SPECIES	452	ccr6a (ENSPREG00000015206)	ENSPREG00000015194	ccr6a (ENSPREG00000015187)	ENSPREG00000015181	ccr6a (ENSPREG00000015164)	cep43 (ENSPREG00000015123)	kidins220b (ENSPREG00000015065)	ENSPREG00000015053	ENSPREG00000015043	allc (ENSPREG00000014999)	ENSPREG00000014954	ENSPREG00000014935	ENSPREG00000014922	ENSPREG00000014913	ENSPREG00000014904	cpsf3 (ENSPREG00000014875) #22	ADAM17 (ENSPREG00000014847) #24	ENSPREG00000014818 #24	taf1b (ENSPREG00000014770) #27	klf11a (ENSPREG00000014748) #29	ENSPREG00000014721	rrm2 (ENSPREG00000014623) #30	ENSPREG00000014590	zdhhc14 (ENSPREG00000014577)	tmem242 (ENSPREG00000014564)	arid1b (ENSPREG00000014523)	CLDN20 (ENSPREG00000014486)	ENSPREG00000014474	ENSPREG00000014465	ENSPREG00000014446	ENSPREG00000014430
NAME_6	ANCESTRAL SPECIES	233														ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00970000193439.a.b.b.a	ENSGT00970000193439.a.a.a	ENSGT00940000155734.mb.a	ENSGT00950000183053.B
Amazon molly	MODERN SPECIES	418										allc (ENSPFOG00000016215)	ENSPFOG00000015660	ENSPFOG00000016164	ENSPFOG00000023668	ENSPFOG00000016140	asap2b (ENSPFOG00000015994)	cpsf3 (ENSPFOG00000015922) #22	ADAM17 (ENSPFOG00000015843) #24	taf1b (ENSPFOG00000015766) #27	klf11a (ENSPFOG00000015744) #29	LGALS8 (ENSPFOG00000015699)	rrm2 (ENSPFOG00000015666) #30	zdhhc14 (ENSPFOG00000015608)	tmem242 (ENSPFOG00000015592)	ENSPFOG00000015517	ENSPFOG00000015493	ENSPFOG00000015455	ENSPFOG00000015382	ENSPFOG00000015368	CLDN20 (ENSPFOG00000020600)	ENSPFOG00000015239	ENSPFOG00000015231
Sailfin molly	MODERN SPECIES	977												allc (ENSPLAG00000000875)	ENSPLAG00000000876	ENSPLAG00000000877	asap2b (ENSPLAG00000000881)	cpsf3 (ENSPLAG00000000882) #22	ADAM17 (ENSPLAG00000000884) #24	taf1b (ENSPLAG00000000887) #27	klf11a (ENSPLAG00000000889) #29	LGALS8 (ENSPLAG00000000004)	rrm2 (ENSPLAG00000000893) #30	ENSPLAG00000000894	zdhhc14 (ENSPLAG00000000896)	tmem242 (ENSPLAG00000000898)	arid1b (ENSPLAG00000000900)	CLDN20 (ENSPLAG00000000902)	ENSPLAG00000000903	ENSPLAG00000000905	ENSPLAG00000000910	ENSPLAG00000000912
Platyfish	MODERN SPECIES	6	ENSXMAG00000024485	ENSXMAG00000021712	ccr6a (ENSXMAG00000028571)	ccr6a (ENSXMAG00000027133)	ccr6a (ENSXMAG00000028045)	ccr6a (ENSXMAG00000028464)	ccr6a (ENSXMAG00000027410)	cep43 (ENSXMAG00000009667)	mboat2b (ENSXMAG00000009673)	kidins220b (ENSXMAG00000009693)	ENSXMAG00000020179	allc (ENSXMAG00000024709)	ENSXMAG00000021799	ENSXMAG00000025780	asap2b (ENSXMAG00000009744)	cpsf3 (ENSXMAG00000009784) #22	ADAM17 (ENSXMAG00000009810) #24	taf1b (ENSXMAG00000009858) #27	klf11a (ENSXMAG00000009885) #29	LGALS8 (ENSXMAG00000009889)	rrm2 (ENSXMAG00000009907) #30	zdhhc14 (ENSXMAG00000009927)	tmem242 (ENSXMAG00000009938)	arid1b (ENSXMAG00000009940)	ENSXMAG00000009971	ENSXMAG00000025845	ENSXMAG00000009973	CLDN20 (ENSXMAG00000020180)	ENSXMAG00000009976	ENSXMAG00000016002	ENSXMAG00000028558
Oryzias	ANCESTRAL SPECIES	38	ENSGT00930000151053	ENSGT00940000163503.A.a.b	ENSGT00940000155720.c.a	ENSGT00390000010349.a.a	ENSGT00940000155144.m	ENSGT00390000013955	ENSGT00950000183136.a.b	ENSGT01030000234517.H.a	ENSGT00940000163655.b	ENSGT00950000182772.A.a.b.`b.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000156714.b	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000163460.a.a.b	ENSGT00940000156512.b.b	ENSGT00940000155734.mb.a	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000163429.C	ENSGT00950000183024.a.a.b.r	ENSGT00390000001588	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155691.c.b	ENSGT00940000157058.k	ENSGT00940000154347.b.a
Oryzias_a	ANCESTRAL SPECIES	48	ENSGT00930000151053	ENSGT00940000155720.c.a	ENSGT00390000010349.a.a	ENSGT00940000163503.A.a.b	ENSGT00940000155144.m	ENSGT00390000013955	ENSGT00950000183136.a.b	ENSGT01030000234517.H.a	ENSGT00940000163655.b	ENSGT00950000182772.A.a.b.`b.b.a	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000156714.b	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000163460.a.a.b	ENSGT00940000156512.b.b	ENSGT00940000155734.mb.a	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000163429.C	ENSGT00950000183024.a.a.b.r	ENSGT00390000001588	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155691.c.b.g	ENSGT00940000157058.k	ENSGT00940000154347.b.a
Japanese Medaka HdrR	MODERN SPECIES	16	ENSORLG00000024040	ENSORLG00000029838	ENSORLG00000018168	vipas39 (ENSORLG00000018164)	ENSORLG00000018161	cdc42bpb (ENSORLG00000018157)	ENSORLG00000029120	ENSORLG00000025956	ENSORLG00000028187	ccr6a (ENSORLG00000026698)	ENSORLG00000018150	ENSORLG00000018147	kidins220b (ENSORLG00000018143)	allc (ENSORLG00000018141)	ENSORLG00000018136	cpsf3 (ENSORLG00000018854) #22	ENSORLG00000023593	ENSORLG00000026593	hivep2a (ENSORLG00000018133)	ENSORLG00000018132	myt1la (ENSORLG00000018130) #16	rnaseh1 (ENSORLG00000018127)	rps7 (ENSORLG00000018123)	ENSORLG00000029165	ENSORLG00000021972	ENSORLG00000023173	ENSORLG00000018118	ndufaf7 (ENSORLG00000018112)	ADAM17 (ENSORLG00000018108) #24	ENSORLG00000018105 #27	klf11a (ENSORLG00000018102) #29
Chinese medaka	MODERN SPECIES	377															asap2b (ENSOSIG00000013500)	cpsf3 (ENSOSIG00000015094) #22
Oryzias_b	ANCESTRAL SPECIES	55									ENSGT00940000163655.b	ENSGT00950000182772.A.a.b.`b.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000156714.b	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000163460.a.a.b	ENSGT00940000156512.b.b	ENSGT00940000155734.mb.a	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00940000163429.C	ENSGT00950000183024.a.a.b.r	ENSGT00390000001588	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00940000155691.c.b	ENSGT00940000157058.k	ENSGT00940000154347.b.a
Javanese ricefish	MODERN SPECIES	16							ENSOJAG00000021773	ENSOJAG00000021771	cep43 (ENSOJAG00000021689)	ccr6a (ENSOJAG00000021679)	ckbb (ENSOJAG00000021637)	ENSOJAG00000021634	allc (ENSOJAG00000021592)	ENSOJAG00000021586	asap2b (ENSOJAG00000020916)	cpsf3 (ENSOJAG00000020520) #22	ENSOJAG00000020472	ENSOJAG00000020467	ENSOJAG00000020450	hivep2a (ENSOJAG00000020438)	e2f6 (ENSOJAG00000020421)	myt1la (ENSOJAG00000020313) #16	rnaseh1 (ENSOJAG00000020297)	rps7 (ENSOJAG00000020241)	cnksr3 (ENSOJAG00000020203)	PRKD3 (ENSOJAG00000019421)	ENSOJAG00000019239	ENSOJAG00000018653 #27	klf11a (ENSOJAG00000018633) #29	INF2 (ENSOJAG00000018562)	ENSOJAG00000018547
Indian medaka	MODERN SPECIES	103	creb3l1 (ENSOMEG00000009850)	HARBI1 (ENSOMEG00000009868)	atg13 (ENSOMEG00000010014)	kpnb3 (ENSOMEG00000010107)	ENSOMEG00000010136	ENSOMEG00000010146	prph2lb (ENSOMEG00000010160)	ckbb (ENSOMEG00000010183)	ENSOMEG00000010190	ENSOMEG00000010195	ccr6a (ENSOMEG00000010197)	ENSOMEG00000010218	kidins220b (ENSOMEG00000010367)	allc (ENSOMEG00000010415)	asap2b (ENSOMEG00000010590)	cpsf3 (ENSOMEG00000010647) #22	ENSOMEG00000010661
Ovalentaria_B	ANCESTRAL SPECIES	32	ENSGT00980000198805	ENSGT00940000156528.d	ENSGT00940000158912.j.a	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.a #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621
Cichlidae	ANCESTRAL SPECIES	12	ENSGT00950000183116.b.a.b.a	ENSGT00980000198805	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621	ENSGT00390000011342
Pseudocrenilabrinae	ANCESTRAL SPECIES	6	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.o	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621	ENSGT00390000011342
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	3	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.o	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j.e #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j.f #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b.d	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621
Haplochromini	ANCESTRAL SPECIES	13	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.o	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j.e.b #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j.e.a #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b.d	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621
Haplochromini_A	ANCESTRAL SPECIES	11	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.o	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j.e.a #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j.e.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b.d	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000155621
Haplochromini_B	ANCESTRAL SPECIES	49	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000167286	ENSGT00940000156528.d	ENSGT00940000164935.b	ENSGT00940000156521.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a.o	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.j.e.a #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.j.e.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000160560.b.f.a.a.b.d	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a	ENSGT00950000183053.B	ENSGT00940000182072
Zebra mbuna	MODERN SPECIES	1097	ccr6a (ENSMZEG00005014546)	ENSMZEG00005014542	KIF26A (ENSMZEG00005014535)	ENSMZEG00005014530	PLEKHG3 (ENSMZEG00005014511)	spint1b (ENSMZEG00005014493)	pak6b (ENSMZEG00005014481)	myh6 (ENSMZEG00005014476)	zbtb1 (ENSMZEG00005014473)	ZBTB25 (ENSMZEG00005014467)	ENSMZEG00005014456	ENSMZEG00005014448	allc (ENSMZEG00005014438)	ENSMZEG00005014433	asap2b (ENSMZEG00005014395)	cpsf3 (ENSMZEG00005014358) #22	ADAM17 (ENSMZEG00005014337) #24	taf1b (ENSMZEG00005014323) #27	klf11a (ENSMZEG00005014315) #29	RRM2 (ENSMZEG00005014295) #30	ENSMZEG00005014281	RRM2 (ENSMZEG00005014254) #30	zdhhc14 (ENSMZEG00005014228)	tmem242 (ENSMZEG00005014213)	arid1b (ENSMZEG00005014174)	CLDN20 (ENSMZEG00005014168)	ENSMZEG00005014154	ENSMZEG00005014148	ENSMZEG00005014132	ENSMZEG00005014120	ENSMZEG00005014115
Eastern happy	MODERN SPECIES	6	pak6b (ENSACLG00000015852)	spint1b (ENSACLG00000015827)	PLEKHG3 (ENSACLG00000015668)	KIF26A (ENSACLG00000015595)	ENSACLG00000015548	ENSACLG00000015539	cep43 (ENSACLG00000015466)	mboat2b (ENSACLG00000015349)	kidins220b (ENSACLG00000014954)	ENSACLG00000014921	ENSACLG00000014915	allc (ENSACLG00000014845)	ENSACLG00000014840	ENSACLG00000014817	asap2b (ENSACLG00000014676)	cpsf3 (ENSACLG00000014484) #22	ADAM17 (ENSACLG00000014403) #24	taf1b (ENSACLG00000014383) #27	klf11a (ENSACLG00000014371) #29	RRM2 (ENSACLG00000014315) #30	ENSACLG00000014297	RRM2 (ENSACLG00000014215) #30	ENSACLG00000014199	zdhhc14 (ENSACLG00000014145)	tmem242 (ENSACLG00000014130)	arid1b (ENSACLG00000014037)	ENSACLG00000013950	CLDN20 (ENSACLG00000013937)	ENSACLG00000013908	ENSACLG00000013873	ENSACLG00000013852
P. nyererei	MODERN SPECIES	343						ENSPNYG00000004966	ccr6a (ENSPNYG00000004951)	ENSPNYG00000004928	mboat2b (ENSPNYG00000004841)	kidins220b (ENSPNYG00000004758)	ENSPNYG00000004700	allc (ENSPNYG00000004658)	ENSPNYG00000004570	ENSPNYG00000004532	asap2b (ENSPNYG00000004479)	cpsf3 (ENSPNYG00000004405) #22	ADAM17 (ENSPNYG00000004303) #24	taf1b (ENSPNYG00000004205) #27	klf11a (ENSPNYG00000004150) #29	RRM2 (ENSPNYG00000004083) #30	LGALS8 (ENSPNYG00000004063)	RRM2 (ENSPNYG00000004004) #30	zdhhc14 (ENSPNYG00000003969)	ENSPNYG00000003950	CLDN20 (ENSPNYG00000003933)	ENSPNYG00000003906	ENSPNYG00000003869	ENSPNYG00000003838	ENSPNYG00000003816	ENSPNYG00000003804	ENSPNYG00000003790
Burton s mouthbrooder	MODERN SPECIES	499														ENSHBUG00000010067	asap2b (ENSHBUG00000010200)	cpsf3 (ENSHBUG00000001188) #22	ADAM17 (ENSHBUG00000010340) #24	taf1b (ENSHBUG00000010356) #27	klf11a (ENSHBUG00000010369) #29	RRM2 (ENSHBUG00000010408) #30	ENSHBUG00000010464	zdhhc14 (ENSHBUG00000010508)	tmem242 (ENSHBUG00000010534)	arid1b (ENSHBUG00000010565)	ENSHBUG00000010596	CLDN20 (ENSHBUG00000010610)	ENSHBUG00000010653	ENSHBUG00000010663	ENSHBUG00000010678	ENSHBUG00000010703	ENSHBUG00000010712
Lyretail cichlid	MODERN SPECIES	318	ENSNBRG00000003801	myh6 (ENSNBRG00000003821)	ENSNBRG00000003842	pak6b (ENSNBRG00000003864)	spint1b (ENSNBRG00000003919)	PLEKHG3 (ENSNBRG00000004246)	KIF26A (ENSNBRG00000004329)	ENSNBRG00000004401	ccr6a (ENSNBRG00000004416)	cep43 (ENSNBRG00000004425)	mboat2b (ENSNBRG00000004440)	kidins220b (ENSNBRG00000004478)	allc (ENSNBRG00000004578)	ENSNBRG00000004685	ENSNBRG00000004711 #19	cpsf3 (ENSNBRG00000004770) #22	ADAM17 (ENSNBRG00000004857) #24	taf1b (ENSNBRG00000004906) #27	klf11a (ENSNBRG00000005010) #29	RRM2 (ENSNBRG00000005056) #30	ENSNBRG00000005339	RRM2 (ENSNBRG00000005350) #30	zdhhc14 (ENSNBRG00000005388)	tmem242 (ENSNBRG00000005419)	arid1b (ENSNBRG00000005440)	CLDN20 (ENSNBRG00000005590)	ENSNBRG00000005610	ENSNBRG00000005650	ENSNBRG00000005674	ENSNBRG00000005700	ENSNBRG00000005729
Nile tilapia	MODERN SPECIES	6	PLEKHG3 (ENSONIG00000018834)	ENSONIG00000033893	ENSONIG00000036629	KIF26A (ENSONIG00000018832)	ENSONIG00000040677	ccr6a (ENSONIG00000039691)	ENSONIG00000033627	cep43 (ENSONIG00000018830)	mboat2b (ENSONIG00000018827)	kidins220b (ENSONIG00000018825)	ENSONIG00000027508	allc (ENSONIG00000018823)	ENSONIG00000018820	ENSONIG00000018821	asap2b (ENSONIG00000018817)	cpsf3 (ENSONIG00000018812) #22	ADAM17 (ENSONIG00000018811) #24	taf1b (ENSONIG00000018809) #27	klf11a (ENSONIG00000018808) #29	RRM2 (ENSONIG00000018804) #30	ENSONIG00000018802	RRM2 (ENSONIG00000018798) #30	zdhhc14 (ENSONIG00000018796)	tmem242 (ENSONIG00000035750)	arid1b (ENSONIG00000018791)	ENSONIG00000018790	ENSONIG00000028607	CLDN20 (ENSONIG00000021260)	ENSONIG00000018786	ENSONIG00000027663	ENSONIG00000030951
Midas cichlid	MODERN SPECIES	1373															asap2b (ENSACIG00000009886)	cpsf3 (ENSACIG00000009846) #22	ADAM17 (ENSACIG00000009793) #24	taf1b (ENSACIG00000009748) #27
Pomacentridae	ANCESTRAL SPECIES	81	ENSGT00940000158912.j.a	ENSGT00940000164935.b	ENSGT00940000162312.h.c.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000162312.h.d	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.d.a.a	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.i.a #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000155734.mb.a
Pomacentridae_A	ANCESTRAL SPECIES	77	ENSGT00940000164935.b	ENSGT00940000162312.h.c.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000179665	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT00940000162312.h.d.d	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.d.a.a	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.i.a #30	ENSGT00940000155727.o.b	ENSGT00390000013305.a.a.i.b #30	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l
Amphiprion	ANCESTRAL SPECIES	58	ENSGT00940000156521.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.a.a.a.b	ENSGT00940000159075.B	ENSGT00940000161983.b	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000177938	ENSGT00940000161652.b.a	ENSGT00390000001793	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.a.a.a.a.a.a.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.a.a.a.a.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.b	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a.i.a #30	ENSGT00940000155727.o.b	ENSGT01030000235099	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.a.a.a.a.a.b.b.a.b	ENSGT00950000182772.A.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.a.c.a.a.a.a.a.b.b.a.a	ENSGT00950000183053.B
Clown anemonefish	MODERN SPECIES	3197							allc (ENSAOCG00000021437)	ENSAOCG00000021469	ENSAOCG00000021493	ENSAOCG00000021554	ENSAOCG00000021600	ENSAOCG00000021697	ENSAOCG00000021769	ENSAOCG00000021827	asap2b (ENSAOCG00000001599)	cpsf3 (ENSAOCG00000022056) #22	ADAM17 (ENSAOCG00000022177) #24	taf1b (ENSAOCG00000022209) #27	klf11a (ENSAOCG00000022231) #29	RRM2 (ENSAOCG00000001626) #30	LGALS8 (ENSAOCG00000022309)
Orange clownfish	MODERN SPECIES	2	ccr6a (ENSAPEG00000018624)	cep43 (ENSAPEG00000018651)	mboat2b (ENSAPEG00000018713)	kidins220b (ENSAPEG00000018847)	ENSAPEG00000019001	ENSAPEG00000019009	allc (ENSAPEG00000019023)	ENSAPEG00000019038	ENSAPEG00000019111	ENSAPEG00000019179	ENSAPEG00000019226	ENSAPEG00000019300	ENSAPEG00000019323	ENSAPEG00000019355	asap2b (ENSAPEG00000019427)	cpsf3 (ENSAPEG00000019526) #22	ADAM17 (ENSAPEG00000019585) #24	taf1b (ENSAPEG00000019659) #27	klf11a (ENSAPEG00000019681) #29	RRM2 (ENSAPEG00000019696) #30	LGALS8 (ENSAPEG00000019733)	RRM2 (ENSAPEG00000019782) #30	ENSAPEG00000019830	ZDHHC14 (ENSAPEG00000019844)	tmem242 (ENSAPEG00000019855)	arid1b (ENSAPEG00000019865)	CLDN20 (ENSAPEG00000019931)	ENSAPEG00000019944	ENSAPEG00000019975	ENSAPEG00000020031	ENSAPEG00000020071
Spiny chromis	MODERN SPECIES	276									allc (ENSAPOG00000021860)	ENSAPOG00000021888	ENSAPOG00000021896	ENSAPOG00000000620	ENSAPOG00000021909	ENSAPOG00000021913	asap2b (ENSAPOG00000022012)	cpsf3 (ENSAPOG00000022087) #22	ADAM17 (ENSAPOG00000022147) #24	taf1b (ENSAPOG00000022169) #27	klf11a (ENSAPOG00000022186) #29	RRM2 (ENSAPOG00000022256) #30	LGALS8 (ENSAPOG00000022300)	RRM2 (ENSAPOG00000022334) #30	zdhhc14 (ENSAPOG00000022352)	tmem242 (ENSAPOG00000022364)	arid1b (ENSAPOG00000022471)	CLDN20 (ENSAPOG00000000641)	ENSAPOG00000022524	ENSAPOG00000022564
Bicolor damselfish	MODERN SPECIES	1782												ENSSPAG00000018754	ENSSPAG00000018732	ENSSPAG00000018723	asap2b (ENSSPAG00000018615)	cpsf3 (ENSSPAG00000018579) #22	ADAM17 (ENSSPAG00000018484) #24	taf1b (ENSSPAG00000018449) #27	klf11a (ENSSPAG00000018426) #29
Pinecone sodierfish	MODERN SPECIES	16	crnkl1 (ENSMMDG00005011162)	naa20 (ENSMMDG00005011150)	ENSMMDG00005011057	COL12A1 (ENSMMDG00005010765)	ptger2b (ENSMMDG00005010715)	ptger2b (ENSMMDG00005010711)	zfp36l1b (ENSMMDG00005010708)	rad51b (ENSMMDG00005010705)	ENSMMDG00005010701	allc (ENSMMDG00005010691)	rps7 (ENSMMDG00005010678)	rnaseh1 (ENSMMDG00005010675)	myt1la (ENSMMDG00005010664) #16	e2f6 (ENSMMDG00005010659)	asap2b (ENSMMDG00005010647)	cpsf3 (ENSMMDG00005010604) #22	ADAM17 (ENSMMDG00005003858) #24	CFAP57 (ENSMMDG00005003602)	ENSMMDG00005003593	TAF1B (ENSMMDG00005003582) #27	ENSMMDG00005003574	ENSMMDG00005003573 #28	ENSMMDG00005003569	rrm2 (ENSMMDG00005002616) #30	ENSMMDG00005002546	ENSMMDG00005002541	zdhhc14 (ENSMMDG00005018906)	tmem242 (ENSMMDG00005018905)	arid1b (ENSMMDG00005018880)	CLDN20 (ENSMMDG00005018877)	ENSMMDG00005018874
Cod	MODERN SPECIES	13	psma6b (ENSGMOG00000009319)	ENSGMOG00000009312	ENSGMOG00000034228	fbxo16 (ENSGMOG00000006779)	fzd3a (ENSGMOG00000036153)	cdc42bpab (ENSGMOG00000004971)	lft1 (ENSGMOG00000026818)	hnrnpub (ENSGMOG00000001755)	ENSGMOG00000025770	ENSGMOG00000036691	cnstb (ENSGMOG00000024227)	sccpdhb (ENSGMOG00000036474)	ENSGMOG00000004734	e2f6 (ENSGMOG00000027601)	ENSGMOG00000024240	cpsf3 (ENSGMOG00000003157) #22	ADAM17 (ENSGMOG00000003189) #24	ENSGMOG00000014302 ##25	ENSGMOG00000024314	taf1b (ENSGMOG00000035265) #27	klf11a (ENSGMOG00000034525) #29	RRM2 (ENSGMOG00000025006) #30	RRM2 (ENSGMOG00000003512) #30	ENSGMOG00000003532	zdhhc14 (ENSGMOG00000001121)	tmem242 (ENSGMOG00000022212)	arid1b (ENSGMOG00000023203)	CLDN20 (ENSGMOG00000026243)	ENSGMOG00000029176	ENSGMOG00000018590	ENSGMOG00000018605
Otomorpha	ANCESTRAL SPECIES	77	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00940000155734	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000156714.b	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000163429.A	ENSGT00940000163429.C	ENSGT00800000125320	ENSGT00950000183024.a.a.b.r
Clupeiformes	ANCESTRAL SPECIES	125																ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000157612 #28	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000155727.o.b	ENSGT00940000156483.h.b.c	ENSGT00390000008642	ENSGT00940000155634.q.b	ENSGT00940000161252.h	ENSGT00940000157012.l	ENSGT00940000163429.B	ENSGT00800000125320	ENSGT00950000183024.a.a.b.r
Atlantic herring	MODERN SPECIES	6	ASB2 (ENSCHAG00000006083)	ASB2 (ENSCHAG00000006178)	PRIMA1 (ENSCHAG00000006504)	ENSCHAG00000006514	btbd7 (ENSCHAG00000006543)	ubr7 (ENSCHAG00000006625)	si:dkeyp-55f12.3 (ENSCHAG00000007116)	tmem251 (ENSCHAG00000007127)	itpk1a (ENSCHAG00000007133)	chga (ENSCHAG00000007147)	sel1l (ENSCHAG00000007197)	ahsa1a (ENSCHAG00000008185)	si:dkey-177p2.6 (ENSCHAG00000008260)	cdca4 (ENSCHAG00000008264)	HTR3B (ENSCHAG00000008293)	cpsf3 (ENSCHAG00000008346) #22	ADAM17 (ENSCHAG00000008739) #24	ywhaqa (ENSCHAG00000010543) ##25	ENSCHAG00000010573	taf1b (ENSCHAG00000010599) #27	ENSCHAG00000010607 #28	ENSCHAG00000010621 #28	ENSCHAG00000010638	rrm2 (ENSCHAG00000010654) #30	ENSCHAG00000010944	LGALS8 (ENSCHAG00000011017)	zdhhc14 (ENSCHAG00000011024)	tmem242 (ENSCHAG00000011078)	arid1b (ENSCHAG00000011086)	ENSCHAG00000011131	CLDN20 (ENSCHAG00000011145)
Denticle herring	MODERN SPECIES	5	ENSDCDG00000028079	aida (ENSDCDG00000028084)	ENSDCDG00000028111	brox (ENSDCDG00000028124)	ENSDCDG00000028164	igf2r (ENSDCDG00000028197)	slc22a2 (ENSDCDG00000028938)	plg (ENSDCDG00000029112)	plg (ENSDCDG00000029147)	ENSDCDG00000029252	ENSDCDG00000029277	GPR31 (ENSDCDG00000029280)	agbl5 (ENSDCDG00000029289)	ENSDCDG00000029299	hlx1 (ENSDCDG00000029301)	cpsf3 (ENSDCDG00000029337) #22	ADAM17 (ENSDCDG00000029412) #24	ywhaqa (ENSDCDG00000029415) ##25	taf1b (ENSDCDG00000029424) #27	GRHL1 (ENSDCDG00000029427) #28	klf11a (ENSDCDG00000029438) #29	RRM2 (ENSDCDG00000029446) #30	LGALS8 (ENSDCDG00000029455)	LGALS8 (ENSDCDG00000029461)	ENSDCDG00000029483	ENSDCDG00000029485	ADAM17 (ENSDCDG00000029492) #24	ywhaqa (ENSDCDG00000029509) ##25	taf1b (ENSDCDG00000029527) #27	ENSDCDG00000029535 #28	ENSDCDG00000029542 #28
Otophysi	ANCESTRAL SPECIES	54	ENSGT00940000155724.q	ENSGT00940000156078.c	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00940000155734	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b	ENSGT00390000003299	ENSGT00940000158450.d.b	ENSGT00390000017490.f	ENSGT00390000012351.bb
Characiphysae	ANCESTRAL SPECIES	113					ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000157701.a	ENSGT00940000156464	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b	ENSGT00390000003299	ENSGT00940000158450.d.b	ENSGT00390000017490.f	ENSGT00390000012351.bb
Characiphysae_b	ANCESTRAL SPECIES	13	ENSGT01030000234626.B	ENSGT00940000162166	ENSGT00940000160412.a	ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.b	ENSGT00940000157701.b	ENSGT00940000156464	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b	ENSGT00390000003299	ENSGT00940000158450.d.b	ENSGT00390000017490.f	ENSGT00390000012351.bb
Characoidei	ANCESTRAL SPECIES	118				ENSGT01030000234667.b.f.a	ENSGT00390000007441	ENSGT00940000155671.y.b #16	ENSGT00390000003466	ENSGT00390000014122	ENSGT00390000001793	ENSGT00940000161652.b.b	ENSGT00940000157701.b	ENSGT00940000156464	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000156048.e.a.b.b.a	ENSGT00940000155312.a.b	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b	ENSGT00390000003299	ENSGT00940000158450.d.b	ENSGT00390000017490.f	ENSGT00390000012351.bb
Red-bellied piranha	MODERN SPECIES	11	NHSL1 (ENSPNAG00000021901)	acbd3 (ENSPNAG00000021929)	ccr6a (ENSPNAG00000021944)	cep43 (ENSPNAG00000003705)	myt1la (ENSPNAG00000022305) #16	rnaseh1 (ENSPNAG00000022344)	rps7 (ENSPNAG00000022404)	allc (ENSPNAG00000022422)	sox11b (ENSPNAG00000022444)	rnf144ab (ENSPNAG00000022457)	id2b (ENSPNAG00000022467)	kidins220b (ENSPNAG00000022762)	mboat2b (ENSPNAG00000022858)	e2f6 (ENSPNAG00000022887)	ASAP2 (ENSPNAG00000022972) #19	cpsf3 (ENSPNAG00000023060) #22	ADAM17 (ENSPNAG00000023254) #24	ywhaqa (ENSPNAG00000023304) ##25	taf1b (ENSPNAG00000023321) #27	klf11a (ENSPNAG00000023362) #29	rrm2 (ENSPNAG00000023397) #30	actc1a (ENSPNAG00000023407)	ENSPNAG00000023421	SCG5 (ENSPNAG00000023468)	GREM1 (ENSPNAG00000023485)	ENSPNAG00000023517	RYR3 (ENSPNAG00000023840)	aven (ENSPNAG00000023925)	chrm5b (ENSPNAG00000023948)	emc7b (ENSPNAG00000023972)	katnbl1 (ENSPNAG00000024007)
Mexicana tetra	MODERN SPECIES	18	ccr6a (ENSAMXG00000041469)	cep43 (ENSAMXG00000002000)	myt1la (ENSAMXG00000001873) #16	ENSAMXG00000039837	rnaseh1 (ENSAMXG00000042940)	rps7 (ENSAMXG00000041019)	allc (ENSAMXG00000039561)	sox11b (ENSAMXG00000001703)	rnf144ab (ENSAMXG00000042340)	ENSAMXG00000041355	id2b (ENSAMXG00000004758)	kidins220b (ENSAMXG00000004760)	mboat2b (ENSAMXG00000004764)	e2f6 (ENSAMXG00000004766)	ENSAMXG00000004772 #19	cpsf3 (ENSAMXG00000004786) #22	ENSAMXG00000043808	ADAM17 (ENSAMXG00000004790) #24	ywhaqa (ENSAMXG00000034065) ##25	taf1b (ENSAMXG00000004793) #27	klf11a (ENSAMXG00000036736) #29	rrm2 (ENSAMXG00000002688) #30	ENSAMXG00000029756	actc1a (ENSAMXG00000004797)	ENSAMXG00000036014	SCG5 (ENSAMXG00000004801)	GREM1 (ENSAMXG00000041784)	ENSAMXG00000004809	RYR3 (ENSAMXG00000004818)	aven (ENSAMXG00000004863)	chrm5b (ENSAMXG00000026492)
Electric eel	MODERN SPECIES	32	NHSL1 (ENSEEEG00000009690)	acbd3 (ENSEEEG00000009692)	KBTBD11 (ENSEEEG00000009724)	ccr6a (ENSEEEG00000009725)	cep43 (ENSEEEG00000009727)	rnaseh1 (ENSEEEG00000009735)	rps7 (ENSEEEG00000009739)	allc (ENSEEEG00000009756)	sox11b (ENSEEEG00000009766)	rnf144ab (ENSEEEG00000009767)	id2b (ENSEEEG00000009787)	kidins220b (ENSEEEG00000009802)	mboat2b (ENSEEEG00000009813)	e2f6 (ENSEEEG00000009819)	ENSEEEG00000009834 #19	cpsf3 (ENSEEEG00000010171) #22	ADAM17 (ENSEEEG00000010193) #24	ywhaqa (ENSEEEG00000010207) ##25	taf1b (ENSEEEG00000010218) #27	klf11a (ENSEEEG00000010223) #29	rrm2 (ENSEEEG00000010228) #30	actc1a (ENSEEEG00000010295)	SCG5 (ENSEEEG00000010408)	GREM1 (ENSEEEG00000010409)	ENSEEEG00000010410	RYR3 (ENSEEEG00000010414)	aven (ENSEEEG00000010420)	chrm5b (ENSEEEG00000010422)	emc7b (ENSEEEG00000010424)	katnbl1 (ENSEEEG00000010426)	THBS1 (ENSEEEG00000010445)
Channel catfish	MODERN SPECIES	17	nhsl1 (ENSIPUG00000022998)	acbd3 (ENSIPUG00000023014)	ccr6a (ENSIPUG00000023019)	fgfr1op (ENSIPUG00000023022)	myt1la (ENSIPUG00000023048) #16	rnaseh1 (ENSIPUG00000023060)	rps7 (ENSIPUG00000023071)	allc (ENSIPUG00000023088)	sox11b (ENSIPUG00000023096)	ENSIPUG00000023404	id2b (ENSIPUG00000023411)	kidins220b (ENSIPUG00000023417)	mboat2b (ENSIPUG00000023454)	e2f6 (ENSIPUG00000023463)	ASAP2 (ENSIPUG00000023474) #19	cpsf3 (ENSIPUG00000023488) #22	ADAM17 (ENSIPUG00000023507) #24	ywhaq (ENSIPUG00000023526) ##25	taf1b (ENSIPUG00000023529) #27	klf11 (ENSIPUG00000023533) #29	rrm2 (ENSIPUG00000023535) #30	actc1a (ENSIPUG00000023541)	SCG5 (ENSIPUG00000023546)	grem1 (ENSIPUG00000023550)	fmn1 (ENSIPUG00000023553)	ryr3 (ENSIPUG00000023575)	aven (ENSIPUG00000023666)	chrm5b (ENSIPUG00000023668)	emc7 (ENSIPUG00000023669)	katnbl1 (ENSIPUG00000023672)	thbs1 (ENSIPUG00000023678)
Cyprinoidei	ANCESTRAL SPECIES	44	ENSGT00940000153897.b.a.b	ENSGT00940000155459.x.b	ENSGT01030000234527.A.a.a.b.a	ENSGT00490000043329.a.b.g.a	ENSGT00940000155724.q	ENSGT00940000156078.c	ENSGT00530000063503.a.b.g.b	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000155734	ENSGT00940000167539	ENSGT00940000155699.a.a #22	ENSGT00940000155443.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b #29	ENSGT00390000013305.a.a #30	ENSGT00940000156048.e.a.b.b.a	ENSGT00390000009816	ENSGT00940000154209.a.a.h.d	ENSGT00940000154289.A.a.b	ENSGT00940000155507.a.b	ENSGT00390000003299	ENSGT00940000158450.d.b	ENSGT00390000017490.f	ENSGT00390000012351.bb	ENSGT00940000155832.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	154											ENSGT00940000156464.eb.a.b	ENSGT00940000156714.b.b	ENSGT01030000234564.a.a.a.a.b.b.f	ENSGT00940000155734.gb.b	ENSGT00940000167539.a	ENSGT00940000155699.a.a.c #22	ENSGT00940000155443.d.c #24	ENSGT00940000155734.gb.a	ENSGT00940000167539.b	ENSGT00940000155699.a.a.d #22	ENSGT00940000155443.d.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b.a #29	ENSGT00390000013305.a.a.n #30	ENSGT00940000156048.e.a.b.b.a.a	ENSGT00390000009816.c.b	ENSGT00940000154209.a.a.h.d.b	ENSGT00940000154289.A.b	ENSGT00940000155507.a.b.b	ENSGT00390000003299.b
Cyprininae_a	ANCESTRAL SPECIES	127	ENSGT00940000160412.a.a	ENSGT00950000182963.a.a.k.b	ENSGT00530000063651.a.o.b	ENSGT01030000234667.b.f.a.c	ENSGT00390000007441.f	ENSGT00940000155671.y.b.a #16	ENSGT00390000003466.n	ENSGT00390000001793.c	ENSGT00940000161652.b.b.b.b.b	ENSGT00940000157701.f.a.a	ENSGT00940000156464.eb.a.b	ENSGT00940000156714.b.b	ENSGT01030000234564.a.a.a.a.b.b.f	ENSGT00940000155734.gb.b	ENSGT00940000167539.a	ENSGT00940000155699.a.a.c #22	ENSGT00940000155443.d.c #24	ENSGT00440000033827 #27	ENSGT00940000155982.e.b.a #29	ENSGT00390000013305.a.a.n #30	ENSGT00940000156048.e.a.b.b.a.a	ENSGT00390000009816.c.b	ENSGT00940000154209.a.a.h.d.b	ENSGT00940000154289.A.a.b.g	ENSGT00940000155507.a.b.b	ENSGT00390000003299.b	ENSGT00940000158450.d.b.b	ENSGT00390000017490.f.d	ENSGT00390000012351.bb.a	ENSGT00940000155832.c.b	ENSGT00950000182998.B.a
Golden-line barbel	MODERN SPECIES	361	acbd3 (ENSSGRG00000029022)	ccr6a (ENSSGRG00000029020)	cep43 (ENSSGRG00000029019)	myt1la (ENSSGRG00000028996) #16	rnaseh1 (ENSSGRG00000028989)	rps7 (ENSSGRG00000028981)	allc (ENSSGRG00000028980)	sox11b (ENSSGRG00000028979)	rnf144ab (ENSSGRG00000028975)	id2b (ENSSGRG00000028973)	kidins220b (ENSSGRG00000028621)	mboat2b (ENSSGRG00000028611)	e2f6 (ENSSGRG00000028609)	ENSSGRG00000028608	ENSSGRG00000028605	cpsf3 (ENSSGRG00000028258) #22	ADAM17 (ENSSGRG00000028037) #24	klf11a (ENSSGRG00000027887) #29	ENSSGRG00000027881	SCG5 (ENSSGRG00000027876)	GREM1 (ENSSGRG00000027874)	FMN1 (ENSSGRG00000027873)	aven (ENSSGRG00000027796)	chrm5b (ENSSGRG00000027789)	emc7b (ENSSGRG00000027788)	katnbl1 (ENSSGRG00000027787)	THBS1 (ENSSGRG00000027725)	gpr176 (ENSSGRG00000027720)	ENSSGRG00000027719	susd6 (ENSSGRG00000027717)	srsf5b (ENSSGRG00000027705)
Common carp reference	MODERN SPECIES	34	acbd3 (ENSCCRG00000030468)	ccr6a (ENSCCRG00000079596)	cep43 (ENSCCRG00000004734)	myt1la (ENSCCRG00000004110) #16	rnaseh1 (ENSCCRG00000012828)	ENSCCRG00000061716	rps7 (ENSCCRG00000012830)	ENSCCRG00000070367	sox11b (ENSCCRG00000054079)	rnf144ab (ENSCCRG00000075326)	id2b (ENSCCRG00000061529)	kidins220b (ENSCCRG00000050138)	mboat2b (ENSCCRG00000049975)	e2f6 (ENSCCRG00000049247)	asap2b (ENSCCRG00000049372)	cpsf3 (ENSCCRG00000062315) #22	ADAM17 (ENSCCRG00000050647) #24	taf1b (ENSCCRG00000031078) #27	klf11a (ENSCCRG00000031075) #29	RRM2 (ENSCCRG00000067501) #30	ENSCCRG00000005442	GREM1 (ENSCCRG00000051130)	FMN1 (ENSCCRG00000067336)	RYR3 (ENSCCRG00000033603)	aven (ENSCCRG00000062528)	chrm5b (ENSCCRG00000033453)	emc7b (ENSCCRG00000033447)	katnbl1 (ENSCCRG00000014656)	ENSCCRG00000028734	gpr176 (ENSCCRG00000077749)	susd6 (ENSCCRG00000054562)
Goldfish	MODERN SPECIES	12	slc25a24 (ENSCARG00000005688)	ENSCARG00000005722	ENSCARG00000005760	prrx1b (ENSCARG00000005769)	gorab (ENSCARG00000005799)	ntmt2 (ENSCARG00000005808)	allc (ENSCARG00000005816)	rps7 (ENSCARG00000005846)	rnaseh1 (ENSCARG00000005871)	lratd1 (ENSCARG00000005899)	id2b (ENSCARG00000005906)	kidins220b (ENSCARG00000005927)	mboat2b (ENSCARG00000006068)	e2f6 (ENSCARG00000007357)	asap2b (ENSCARG00000007402)	cpsf3 (ENSCARG00000007650) #22	ADAM17 (ENSCARG00000007700) #24	ywhaqa (ENSCARG00000007885) ##25	taf1b (ENSCARG00000007909) #27	klf11a (ENSCARG00000007922) #29	RRM2 (ENSCARG00000007961) #30	ACTA1 (ENSCARG00000009564)	SCG5 (ENSCARG00000009571)	GREM1 (ENSCARG00000009576)	ENSCARG00000009577	ENSCARG00000011008	chrm5b (ENSCARG00000011013)	emc7b (ENSCARG00000011019)	katnbl1 (ENSCARG00000011042)	ENSCARG00000011050	THBS1 (ENSCARG00000011080)
Cyprininae	ANCESTRAL SPECIES	154							ENSGT00940000156464.eb.a.b	ENSGT00940000156714.b.b	ENSGT01030000234564.a.a.a.a.b.b.f	ENSGT00940000155734.gb.b	ENSGT00940000167539.a	ENSGT00940000155699.a.a.c #22	ENSGT00940000155443.d.c #24	ENSGT00940000155734.gb.a	ENSGT00940000167539.b	ENSGT00940000155699.a.a.d #22	ENSGT00940000155443.d.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00440000033827 #27	ENSGT00940000155982.e.b.a #29	ENSGT00390000013305.a.a.n #30	ENSGT00940000156048.e.a.b.b.a.a	ENSGT00390000009816.c.b	ENSGT00940000154209.a.a.h.d.b	ENSGT00940000154289.A.b	ENSGT00940000155507.a.b.b	ENSGT00390000003299.b	ENSGT00940000158450.d.b.b	ENSGT00390000017490.f.d	ENSGT00390000012351.bb.a	ENSGT00940000155832.c.b
Cyprininae_a	ANCESTRAL SPECIES	86	ENSGT00530000063651.a.o.a	ENSGT01030000234667.b.f.a.d	ENSGT00390000007441.e	ENSGT00940000155671.y.b.b #16	ENSGT00390000003466.m	ENSGT00390000014122.g	ENSGT00390000001793.d	ENSGT00940000161652.b.b.b.b.a	ENSGT00940000157701.f.a.b	ENSGT00940000156464.eb.a.a	ENSGT00940000156714.b.a	ENSGT01030000234564.a.a.a.a.b.b.e	ENSGT00940000155734.gb.a	ENSGT00940000155734.hb	ENSGT00940000167539.b	ENSGT00940000155699.a.a.d #22	ENSGT00940000155443.d.d #24	ENSGT01090000260040.b.b.b.a.m.b ##25	ENSGT00940000155982.e.b.b #29	ENSGT00390000013305.a.a.m #30	ENSGT00940000156048.e.a.b.b.a.b	ENSGT00390000009816.c.a	ENSGT00940000154209.a.a.h.d.a	ENSGT00940000154289.A.a.b.h	ENSGT00940000155507.a.b.a	ENSGT00390000003299.a	ENSGT00940000158450.d.b.a	ENSGT00390000017490.f.c	ENSGT00390000012351.bb.b	ENSGT00940000155832.c.a	ENSGT00950000182998.B.b
Common carp reference	MODERN SPECIES	28	acbd3 (ENSCCRG00000036992)	ccr6a (ENSCCRG00000053257)	cep43 (ENSCCRG00000074485)	myt1la (ENSCCRG00000064746) #16	rnaseh1 (ENSCCRG00000014420)	rps7 (ENSCCRG00000014352)	allc (ENSCCRG00000012846)	sox11b (ENSCCRG00000064255)	rnf144ab (ENSCCRG00000036211)	id2b (ENSCCRG00000058010)	kidins220b (ENSCCRG00000050017)	mboat2b (ENSCCRG00000049813)	e2f6 (ENSCCRG00000049786)	ENSCCRG00000049779	asap2b (ENSCCRG00000046382)	cpsf3 (ENSCCRG00000050211) #22	ADAM17 (ENSCCRG00000050317) #24	ywhaqa (ENSCCRG00000002833) ##25	klf11a (ENSCCRG00000050719) #29	ENSCCRG00000058391 #30	ENSCCRG00000031062	SCG5 (ENSCCRG00000033404)	GREM1 (ENSCCRG00000057753)	FMN1 (ENSCCRG00000078430)	RYR3 (ENSCCRG00000031160)	aven (ENSCCRG00000033465)	chrm5b (ENSCCRG00000014640)	katnbl1 (ENSCCRG00000033432)	ENSCCRG00000029486	gpr176 (ENSCCRG00000046879)	ENSCCRG00000078252
Golden-line barbel	MODERN SPECIES	14	hebp2 (ENSSGRG00000040677)	NHSL1 (ENSSGRG00000040679)	acbd3 (ENSSGRG00000040680)	cep43 (ENSSGRG00000040684)	myt1la (ENSSGRG00000040685) #16	rnaseh1 (ENSSGRG00000040687)	allc (ENSSGRG00000040688)	sox11b (ENSSGRG00000040812)	rnf144ab (ENSSGRG00000040813)	id2b (ENSSGRG00000040814)	kidins220b (ENSSGRG00000040828)	mboat2b (ENSSGRG00000041592)	ENSSGRG00000041611	asap2b (ENSSGRG00000041638)	ENSSGRG00000042339	cpsf3 (ENSSGRG00000042343) #22	ADAM17 (ENSSGRG00000042815) #24	ywhaqa (ENSSGRG00000043677) ##25	ENSSGRG00000043678	ENSSGRG00000043681	SCG5 (ENSSGRG00000044040)	GREM1 (ENSSGRG00000044042)	RYR3 (ENSSGRG00000044248)	aven (ENSSGRG00000049247)	chrm5b (ENSSGRG00000049248)	emc7b (ENSSGRG00000049250)	katnbl1 (ENSSGRG00000049252)	THBS1 (ENSSGRG00000049262)	gpr176 (ENSSGRG00000049443)	ENSSGRG00000049444	ENSSGRG00000049445
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	39	snap25a (ENSCARG00000049820)	cnstb (ENSCARG00000049812)	ENSCARG00000049799	hnrnpub (ENSCARG00000049625)	lft1 (ENSCARG00000049599)	cdc42bpab (ENSCARG00000034083)	slc5a6a (ENSCARG00000033370)	rpl7l1 (ENSCARG00000033274)	NCOA1 (ENSCARG00000033214)	slc25a27 (ENSCARG00000033128)	ENSCARG00000033118	heca (ENSCARG00000033106)	ENSCARG00000033098	e2f6 (ENSCARG00000033078)	asap2b (ENSCARG00000031807)	cpsf3 (ENSCARG00000031673) #22	ENSCARG00000031235 #24	ywhaqa (ENSCARG00000031208) ##25	lft1 (ENSCARG00000031196)	cdc42bpab (ENSCARG00000029283)	fzd3a (ENSCARG00000029219)	fbxo16 (ENSCARG00000029185)	fam49a (ENSCARG00000029119)	vsnl1a (ENSCARG00000029106)	sf3b6 (ENSCARG00000029100)	tdrd6 (ENSCARG00000029078)	pla2g7 (ENSCARG00000029062)	mep1a.1 (ENSCARG00000028839)	mep1a.2 (ENSCARG00000028797)	ENSCARG00000028787	ENSCARG00000028777
Goldfish	MODERN SPECIES	39	myt1la (ENSCARG00000023430) #16	cep43 (ENSCARG00000023220)	ccr6a (ENSCARG00000023204)	acbd3 (ENSCARG00000023157)	NHSL1 (ENSCARG00000023097)	hebp2 (ENSCARG00000023065)	acat2 (ENSCARG00000023014)	wtap (ENSCARG00000023002)	sod2 (ENSCARG00000022970)	FNDC1 (ENSCARG00000022921)	id2b (ENSCARG00000022907)	kidins220b (ENSCARG00000022840)	mboat2b (ENSCARG00000022572)	e2f6 (ENSCARG00000048277)	asap2b (ENSCARG00000047812)	cpsf3 (ENSCARG00000047449) #22	ENSCARG00000047379 #24	cited2 (ENSCARG00000047369)	map3k7 (ENSCARG00000044760)	BACH2 (ENSCARG00000044654)	GJA10 (ENSCARG00000044641)	casp8ap2 (ENSCARG00000044635)	katna1 (ENSCARG00000044615)	ginm1 (ENSCARG00000044603)	ENSCARG00000044583	sh3rf1 (ENSCARG00000044539)	ENSCARG00000044531	PALLD (ENSCARG00000044472)
Zebrafish	MODERN SPECIES	12	NHSL1 (ENSDARG00000042627)	acbd3 (ENSDARG00000042623)	ccr6a (ENSDARG00000087474)	cep43 (ENSDARG00000003058)	myt1la (ENSDARG00000008209) #16	rnaseh1 (ENSDARG00000042571)	rps7 (ENSDARG00000042566)	allc (ENSDARG00000042562)	sox11b (ENSDARG00000095743)	rnf144ab (ENSDARG00000042557)	id2b (ENSDARG00000029544)	kidins220b (ENSDARG00000017338)	mboat2b (ENSDARG00000042551)	e2f6 (ENSDARG00000008119)	asap2b (ENSDARG00000019564)	cpsf3 (ENSDARG00000027649) #22	ADAM17 (ENSDARG00000093093) #24	ywhaqa (ENSDARG00000042539) ##25	ENSDARG00000112254	taf1b (ENSDARG00000028937) #27	klf11a (ENSDARG00000030844) #29	rrm2 (ENSDARG00000020711) #30	actc1a (ENSDARG00000042535)	SCG5 (ENSDARG00000032126)	grem1a (ENSDARG00000029546)	FMN1 (ENSDARG00000011975)	RYR3 (ENSDARG00000071331)	aven (ENSDARG00000002894)	chrm5b (ENSDARG00000069598)	emc7b (ENSDARG00000012144)	katnbl1 (ENSDARG00000042522)
Clupeocephala	ANCESTRAL SPECIES	500															ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.m.a.a ##25
Euteleosteomorpha	ANCESTRAL SPECIES	52	ENSGT00940000155724.q	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.b	ENSGT01030000234564.a.a.a.a.b.b	ENSGT00940000155734	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.m.a.a ##25
Acanthomorphata	ANCESTRAL SPECIES	7	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000164128.b
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000164128.b
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000164128.b
Tiger tail seahorse	MODERN SPECIES	350							sox11a (ENSHCOG00000016265)	CMPK2 (ENSHCOG00000016245)	rsad2 (ENSHCOG00000016219)	rnf144aa (ENSHCOG00000016198)	id2a (ENSHCOG00000016190)	KIDINS220 (ENSHCOG00000016172)	MBOAT2 (ENSHCOG00000016042)	asap2a (ENSHCOG00000016011) #19	itgb1bp1 (ENSHCOG00000015971) #21	CPSF3 (ENSHCOG00000015957) #22	ENSHCOG00000015932	iah1 (ENSHCOG00000015854) #23	adam17a (ENSHCOG00000015914) #24	grhl1 (ENSHCOG00000015842) #28	ENSHCOG00000015798	dnaaf2 (ENSHCOG00000015790)	lrr1 (ENSHCOG00000015782)	ENSHCOG00000015776	RPAP1 (ENSHCOG00000015771)	ltk (ENSHCOG00000015756)	itpka (ENSHCOG00000015694)	ivd (ENSHCOG00000015670)	BAHD1 (ENSHCOG00000015643)	ccdc32 (ENSHCOG00000015611)	pcmtl (ENSHCOG00000015605)
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Climbing perch	MODERN SPECIES	13	ENSATEG00000013946	NT5E (ENSATEG00000014109)	ENSATEG00000014131	ENSATEG00000014143	colec11 (ENSATEG00000014201)	ENSATEG00000014222	sox11a (ENSATEG00000014241)	CMPK2 (ENSATEG00000014256)	rsad2 (ENSATEG00000014261)	rnf144aa (ENSATEG00000025612)	id2a (ENSATEG00000014295)	KIDINS220 (ENSATEG00000014330)	MBOAT2 (ENSATEG00000014426)	asap2a (ENSATEG00000014440) #19	itgb1bp1 (ENSATEG00000014508) #21	CPSF3 (ENSATEG00000014525) #22	ENSATEG00000026609	iah1 (ENSATEG00000014577) #23	adam17a (ENSATEG00000014598) #24	ENSATEG00000014650 ##25	grhl1 (ENSATEG00000014667) #28	ENSATEG00000014722 #29	ENSATEG00000028060	ENSATEG00000014750	ENSATEG00000028018	ENSATEG00000014787	itpka (ENSATEG00000015070)	ivd (ENSATEG00000015078)	ENSATEG00000015131	ENSATEG00000015174	ccdc32 (ENSATEG00000015190)
Siamese fighting fish	MODERN SPECIES	12	NT5E (ENSBSLG00000026405)	HTR1B (ENSBSLG00000026402)	ENSBSLG00000026399	myo6b (ENSBSLG00000026394)	colec11 (ENSBSLG00000026389)	ENSBSLG00000026388	sox11a (ENSBSLG00000026384)	CMPK2 (ENSBSLG00000026383)	rsad2 (ENSBSLG00000026381)	rnf144aa (ENSBSLG00000026379)	id2a (ENSBSLG00000026377)	KIDINS220 (ENSBSLG00000026360)	MBOAT2 (ENSBSLG00000026337)	asap2a (ENSBSLG00000026280) #19	itgb1bp1 (ENSBSLG00000026259) #21	CPSF3 (ENSBSLG00000026230) #22	DNAJC30 (ENSBSLG00000026205)	iah1 (ENSBSLG00000026202) #23	adam17a (ENSBSLG00000026081) #24	ywhaqb (ENSBSLG00000026032) ##25	grhl1 (ENSBSLG00000025998) #28	ENSBSLG00000025968	dnaaf2 (ENSBSLG00000025958)	lrr1 (ENSBSLG00000025941)	ENSBSLG00000025768	ENSBSLG00000025687	ltk (ENSBSLG00000025570)	itpka (ENSBSLG00000025560)	ivd (ENSBSLG00000025511)	BAHD1 (ENSBSLG00000025485)	PRLHR (ENSBSLG00000025476)
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000007940	HTR1B (ENSMAMG00000007784)	ENSMAMG00000025443	MYO6 (ENSMAMG00000008169)	colec11 (ENSMAMG00000008241)	ENSMAMG00000008263	sox11a (ENSMAMG00000008318)	CMPK2 (ENSMAMG00000008329)	rsad2 (ENSMAMG00000008344)	rnf144aa (ENSMAMG00000008366)	id2a (ENSMAMG00000008374)	KIDINS220 (ENSMAMG00000008395)	MBOAT2 (ENSMAMG00000008701)	asap2a (ENSMAMG00000008768) #19	itgb1bp1 (ENSMAMG00000026643) #21	CPSF3 (ENSMAMG00000008835) #22	ENSMAMG00000027424	iah1 (ENSMAMG00000008879) #23	adam17a (ENSMAMG00000008896) #24	ENSMAMG00000008932 ##25	grhl1 (ENSMAMG00000008950) #28	ENSMAMG00000008992 #29	ENSMAMG00000000384	ENSMAMG00000000417	ENSMAMG00000000435	ENSMAMG00000000483	ltk (ENSMAMG00000000706)	itpka (ENSMAMG00000000845)	ivd (ENSMAMG00000000871)	ENSMAMG00000000945	ENSMAMG00000000959
Carangaria	ANCESTRAL SPECIES	10	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Seriola	ANCESTRAL SPECIES	3	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670.e	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Greater amberjack	MODERN SPECIES	62	nt5e (ENSSDUG00000017875)	HTR1B (ENSSDUG00000017921)	ENSSDUG00000017930	MYO6 (ENSSDUG00000017969)	colec11 (ENSSDUG00000018038)	ENSSDUG00000018077	sox11a (ENSSDUG00000018094)	CMPK2 (ENSSDUG00000018105)	rsad2 (ENSSDUG00000018119)	rnf144aa (ENSSDUG00000018147)	id2a (ENSSDUG00000018183)	KIDINS220 (ENSSDUG00000018195)	MBOAT2 (ENSSDUG00000018300)	asap2a (ENSSDUG00000018351) #19	itgb1bp1 (ENSSDUG00000018462) #21	CPSF3 (ENSSDUG00000018498) #22	DNAJC30 (ENSSDUG00000018558)	iah1 (ENSSDUG00000018632) #23	adam17a (ENSSDUG00000018573) #24	ywhaqb (ENSSDUG00000018650) ##25	grhl1 (ENSSDUG00000018671) #28	klf11b (ENSSDUG00000018736) #29	ENSSDUG00000018753	lrr1 (ENSSDUG00000018764)	ENSSDUG00000018787	RPAP1 (ENSSDUG00000018797)	ENSSDUG00000018851	ltk (ENSSDUG00000018875)	itpka (ENSSDUG00000018981)	ivd (ENSSDUG00000018998)	ENSSDUG00000019058
Yellowtail amberjack	MODERN SPECIES	3229	nt5e (ENSSLDG00000003971)	HTR1B (ENSSLDG00000004018)	ENSSLDG00000004047	myo6b (ENSSLDG00000004097)	colec11 (ENSSLDG00000004216)	ENSSLDG00000004259	sox11a (ENSSLDG00000004300)	CMPK2 (ENSSLDG00000004335)	rsad2 (ENSSLDG00000004353)	rnf144aa (ENSSLDG00000004405)	id2a (ENSSLDG00000004462)	KIDINS220 (ENSSLDG00000004570)	MBOAT2 (ENSSLDG00000005032)	asap2a (ENSSLDG00000005093) #19	itgb1bp1 (ENSSLDG00000005184) #21	CPSF3 (ENSSLDG00000005234) #22	DNAJC30 (ENSSLDG00000005316)	iah1 (ENSSLDG00000005332) #23	adam17a (ENSSLDG00000005376) #24	ywhaqb (ENSSLDG00000005453) ##25	grhl1 (ENSSLDG00000005479) #28	klf11b (ENSSLDG00000005520) #29	ENSSLDG00000005525	lrr1 (ENSSLDG00000005540)	ENSSLDG00000005569	RPAP1 (ENSSLDG00000005587)	ENSSLDG00000005633	ltk (ENSSLDG00000005662)	itpka (ENSSLDG00000005739)	ivd (ENSSLDG00000005789)	ENSSLDG00000005859
Barramundi perch	MODERN SPECIES	171					colec11 (ENSLCAG00010023232)	ENSLCAG00010023229	sox11a (ENSLCAG00010023224)	CMPK2 (ENSLCAG00010023220)	rsad2 (ENSLCAG00010023211)	rnf144aa (ENSLCAG00010023207)	id2a (ENSLCAG00010023201)	KIDINS220 (ENSLCAG00010023169)	MBOAT2 (ENSLCAG00010023139)	asap2a (ENSLCAG00010023094) #19	itgb1bp1 (ENSLCAG00010023072) #21	CPSF3 (ENSLCAG00010022901) #22	DNAJC30 (ENSLCAG00010022857)	iah1 (ENSLCAG00010022854) #23	adam17a (ENSLCAG00010022846) #24	ywhaqb (ENSLCAG00010022827) ##25	grhl1 (ENSLCAG00010022815) #28	klf11b (ENSLCAG00010022810) #29	ENSLCAG00010022809	lrr1 (ENSLCAG00010022806)	ENSLCAG00010022803	RPAP1 (ENSLCAG00010022790)	ltk (ENSLCAG00010022736)	itpka (ENSLCAG00010022705)	ivd (ENSLCAG00010022678)	BAHD1 (ENSLCAG00010022662)	PRLHR (ENSLCAG00010022661)
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00390000012242	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Turbot	MODERN SPECIES	8	cga (ENSSMAG00000020254)	SYNCRIP (ENSSMAG00000020337)	ENSSMAG00000020339	ENSSMAG00000020391	ENSSMAG00000020402	colec11 (ENSSMAG00000020438)	ENSSMAG00000020440	SOX11 (ENSSMAG00000020445)	ENSSMAG00000022504	rnf144aa (ENSSMAG00000020451)	id2a (ENSSMAG00000037449)	KIDINS220 (ENSSMAG00000020468)	MBOAT2 (ENSSMAG00000020503)	asap2a (ENSSMAG00000020510) #19	itgb1bp1 (ENSSMAG00000020525) #21	CPSF3 (ENSSMAG00000020534) #22	ENSSMAG00000020542	iah1 (ENSSMAG00000023064) #23	adam17a (ENSSMAG00000020548) #24	ENSSMAG00000020553 ##25	grhl1 (ENSSMAG00000020554) #28	ENSSMAG00000020566 #29	ENSSMAG00000020583	ENSSMAG00000020573	ENSSMAG00000020592	ENSSMAG00000020594	ltk (ENSSMAG00000020605)	itpka (ENSSMAG00000020615)	ivd (ENSSMAG00000020617)	ENSSMAG00000020620	ENSSMAG00000020621
Tongue sole	MODERN SPECIES		ltk (ENSCSEG00000001731)	itpka (ENSCSEG00000001914)	ivd (ENSCSEG00000001922)	ENSCSEG00000001934	PRLHR (ENSCSEG00000001941)	ccdc32 (ENSCSEG00000001943)	pcmtl (ENSCSEG00000001948)	rpusd2 (ENSCSEG00000001953)	disp2 (ENSCSEG00000001957)	sowahcb (ENSCSEG00000001961)	ENSCSEG00000001962	eml1 (ENSCSEG00000001974)	ENSCSEG00000002000	ENSCSEG00000002002	itgb1bp1 (ENSCSEG00000002006) #21	CPSF3 (ENSCSEG00000002021) #22	ENSCSEG00000002040	MBOAT2 (ENSCSEG00000002048)	KIDINS220 (ENSCSEG00000002070)	id2a (ENSCSEG00000002172)	rcan3 (ENSCSEG00000002175)	nipal3 (ENSCSEG00000002185)	ENSCSEG00000002194	ENSCSEG00000002206	cnksr1 (ENSCSEG00000002211)	rps6ka1 (ENSCSEG00000002236)	ENSCSEG00000002279	ENSCSEG00000002291	si:dkey-221l4.10 (ENSCSEG00000002303)	tmem234 (ENSCSEG00000002305)	dcdc2b (ENSCSEG00000002306)
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00950000182856.a.b.a	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00390000014780
Tetraodon	MODERN SPECIES	1	znf292a (ENSTNIG00000017298)	syncripl (ENSTNIG00000017299)	SNX14 (ENSTNIG00000017300)	ENSTNIG00000017301	myo6b (ENSTNIG00000017302)	colec11 (ENSTNIG00000017303)	sox11a (ENSTNIG00000017304)	CMPK2 (ENSTNIG00000017305)	rsad2 (ENSTNIG00000017306)	rnf144aa (ENSTNIG00000017307)	id2a (ENSTNIG00000017308)	KIDINS220 (ENSTNIG00000017309)	MBOAT2 (ENSTNIG00000017310)	asap2a (ENSTNIG00000017311) #19	itgb1bp1 (ENSTNIG00000017312) #21	CPSF3 (ENSTNIG00000017313) #22	DNAJC30 (ENSTNIG00000017314)	iah1 (ENSTNIG00000017315) #23	adam17a (ENSTNIG00000017316) #24	ywhaqb (ENSTNIG00000004120) ##25	grhl1 (ENSTNIG00000017317) #28	klf11b (ENSTNIG00000017318) #29	ENSTNIG00000000030	ENSTNIG00000017319	lrr1 (ENSTNIG00000017320)	ENSTNIG00000017321	RPAP1 (ENSTNIG00000017322)	ENSTNIG00000017323	itpka (ENSTNIG00000017324)	ivd (ENSTNIG00000017325)	BAHD1 (ENSTNIG00000017326)
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Ballan wrasse	MODERN SPECIES	151	SNX14 (ENSLBEG00000014597)	HTR1B (ENSLBEG00000014485)	ENSLBEG00000014470	ENSLBEG00000014455	myo6b (ENSLBEG00000014283)	colec11 (ENSLBEG00000014219)	sox11a (ENSLBEG00000014198)	CMPK2 (ENSLBEG00000014178)	rsad2 (ENSLBEG00000014151)	rnf144aa (ENSLBEG00000014121)	id2a (ENSLBEG00000014100)	KIDINS220 (ENSLBEG00000013849)	MBOAT2 (ENSLBEG00000013695)	asap2a (ENSLBEG00000013596) #19	itgb1bp1 (ENSLBEG00000013544) #21	CPSF3 (ENSLBEG00000013492) #22	DNAJC30 (ENSLBEG00000013458)	iah1 (ENSLBEG00000013431) #23	adam17a (ENSLBEG00000013365) #24	ywhaqb (ENSLBEG00000013306) ##25	grhl1 (ENSLBEG00000013232) #28	klf11b (ENSLBEG00000013189) #29	dnaaf2 (ENSLBEG00000013161)	lrr1 (ENSLBEG00000013147)	ENSLBEG00000013138	ENSLBEG00000013085
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Perciformes	ANCESTRAL SPECIES	12	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Cottioidei	ANCESTRAL SPECIES	8	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000168150.a	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Lumpfish	MODERN SPECIES	14	syncripl (ENSCLMG00005021544)	SNX14 (ENSCLMG00005021516)	ENSCLMG00005021512	HTR1B (ENSCLMG00005021511)	myo6b (ENSCLMG00005019728)	colec11 (ENSCLMG00005019691)	sox11a (ENSCLMG00005019689)	CMPK2 (ENSCLMG00005019688)	rsad2 (ENSCLMG00005019686)	rnf144aa (ENSCLMG00005019682)	id2a (ENSCLMG00005019678)	KIDINS220 (ENSCLMG00005019656)	MBOAT2 (ENSCLMG00005019260)	asap2a (ENSCLMG00005019112) #19	itgb1bp1 (ENSCLMG00005019106) #21	CPSF3 (ENSCLMG00005019097) #22	ENSCLMG00005019095	iah1 (ENSCLMG00005019093) #23	adam17a (ENSCLMG00005018220) #24	ywhaqb (ENSCLMG00005018194) ##25	grhl1 (ENSCLMG00005018181) #28	klf11b (ENSCLMG00005018177) #29	dnaaf2 (ENSCLMG00005018176)	lrr1 (ENSCLMG00005018174)	ENSCLMG00005018170	ENSCLMG00005018162	ltk (ENSCLMG00005018149)	itpka (ENSCLMG00005018148)	ivd (ENSCLMG00005018146)	BAHD1 (ENSCLMG00005018144)	PRLHR (ENSCLMG00005018143)
Stickleback	MODERN SPECIES	15	SNX14 (ENSGACG00000009094)	HTR1B (ENSGACG00000009090)	ENSGACG00000009087	ENSGACG00000009073	colec11 (ENSGACG00000009068)	ENSGACG00000009067	sox11b (ENSGACG00000009065)	CMPK2 (ENSGACG00000009050)	rsad2 (ENSGACG00000009046)	rnf144aa (ENSGACG00000009031)	id2a (ENSGACG00000009030)	KIDINS220 (ENSGACG00000008998)	MBOAT2 (ENSGACG00000008968)	asap2a (ENSGACG00000008955) #19	itgb1bp1 (ENSGACG00000008941) #21	CPSF3 (ENSGACG00000008929) #22	iah1 (ENSGACG00000008923) #23	adam17a (ENSGACG00000008913) #24	ywhaqb (ENSGACG00000008849) ##25	grhl1 (ENSGACG00000008845) #28	klf11b (ENSGACG00000008836) #29	lrr1 (ENSGACG00000008822)	ENSGACG00000008818	ENSGACG00000008807	ltk (ENSGACG00000008800)	itpka (ENSGACG00000008795)	ivd (ENSGACG00000008724)	prlh2r (ENSGACG00000008719)	ccdc32 (ENSGACG00000008704)	pcmtl (ENSGACG00000008666)	rpusd2 (ENSGACG00000008656)
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00940000155982.e.a #29	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000164214.l
Channel bull blenny	MODERN SPECIES	14	syncripl (ENSCGOG00000021780)	SNX14 (ENSCGOG00000022079)	nt5e (ENSCGOG00000022171)	HTR1B (ENSCGOG00000022185)	ENSCGOG00000022186	myo6b (ENSCGOG00000022238)	colec11 (ENSCGOG00000023415)	sox11a (ENSCGOG00000023417)	CMPK2 (ENSCGOG00000023419)	rsad2 (ENSCGOG00000023420)	rnf144aa (ENSCGOG00000023424)	id2a (ENSCGOG00000023437)	MBOAT2 (ENSCGOG00000023442)	asap2a (ENSCGOG00000023513) #19	itgb1bp1 (ENSCGOG00000023982) #21	CPSF3 (ENSCGOG00000023997) #22	DNAJC30 (ENSCGOG00000002696)	iah1 (ENSCGOG00000002724) #23	adam17a (ENSCGOG00000002865) #24	ywhaqb (ENSCGOG00000004370) ##25	grhl1 (ENSCGOG00000004378) #28	klf11b (ENSCGOG00000004442) #29	ENSCGOG00000004469	lrr1 (ENSCGOG00000004456)	ENSCGOG00000004470	ENSCGOG00000004493	ENSCGOG00000004830	ltk (ENSCGOG00000004835)	itpka (ENSCGOG00000004878)	ENSCGOG00000004886	ivd (ENSCGOG00000004890)
Pike perch	MODERN SPECIES	5	nt5e (ENSSLUG00000018779)	ENSSLUG00000018750	myo6b (ENSSLUG00000014112)	colec11 (ENSSLUG00000013898)	ENSSLUG00000013873	sox11a (ENSSLUG00000013861)	CMPK2 (ENSSLUG00000013856)	rsad2 (ENSSLUG00000013832)	rnf144aa (ENSSLUG00000013822)	ENSSLUG00000013813	id2a (ENSSLUG00000013806)	KIDINS220 (ENSSLUG00000013706)	MBOAT2 (ENSSLUG00000013633)	asap2a (ENSSLUG00000013070) #19	itgb1bp1 (ENSSLUG00000013021) #21	CPSF3 (ENSSLUG00000012454) #22	ENSSLUG00000012398	iah1 (ENSSLUG00000012385) #23	adam17a (ENSSLUG00000012343) #24	ywhaqb (ENSSLUG00000012331) ##25	grhl1 (ENSSLUG00000012323) #28	klf11b (ENSSLUG00000012317) #29	dnaaf2 (ENSSLUG00000012314)	lrr1 (ENSSLUG00000012310)	ENSSLUG00000012305	RPAP1 (ENSSLUG00000012241)	ltk (ENSSLUG00000012092)	itpka (ENSSLUG00000012068)	ivd (ENSSLUG00000012043)	BAHD1 (ENSSLUG00000012029)	ENSSLUG00000012024
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008	ENSGT00390000014780
Gilthead seabream	MODERN SPECIES	7	nt5e (ENSSAUG00010026291)	HTR1B (ENSSAUG00010026290)	ENSSAUG00010026283	myo6b (ENSSAUG00010026268)	colec11 (ENSSAUG00010026257)	ENSSAUG00010026251	CMPK2 (ENSSAUG00010026241)	rsad2 (ENSSAUG00010026238)	rnf144aa (ENSSAUG00010026235)	ENSSAUG00010026231	ENSSAUG00010026230	KIDINS220 (ENSSAUG00010026205)	MBOAT2 (ENSSAUG00010026126)	asap2a (ENSSAUG00010026088) #19	ITGB1BP1 (ENSSAUG00010026080) #21	CPSF3 (ENSSAUG00010026070) #22	DNAJC30 (ENSSAUG00010026069)	iah1 (ENSSAUG00010026068) #23	adam17a (ENSSAUG00010026004) #24	ENSSAUG00010025994	id2a (ENSSAUG00010025993)	grhl1 (ENSSAUG00010025988) #28	ENSSAUG00010025984	dnaaf2 (ENSSAUG00010025983)	lrr1 (ENSSAUG00010025981)	ENSSAUG00010025980	RPAP1 (ENSSAUG00010025965)	ltk (ENSSAUG00010025825)	itpka (ENSSAUG00010025824)	ivd (ENSSAUG00010025821)	BAHD1 (ENSSAUG00010025818)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000157612 #28	ENSGT00510000048466	ENSGT00940000158830	ENSGT00390000013762.b.b	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008	ENSGT00390000014780
Large yellow croaker	MODERN SPECIES	495	nt5e (ENSLCRG00005012675)	HTR1B (ENSLCRG00005012739)	ENSLCRG00005012741	myo6b (ENSLCRG00005012749)	colec11 (ENSLCRG00005012754)	ENSLCRG00005012756	sox11a (ENSLCRG00005012759)	CMPK2 (ENSLCRG00005012760)	Rsad2 (ENSLCRG00005012761)	rnf144aa (ENSLCRG00005012763)	id2a (ENSLCRG00005012765)	KIDINS220 (ENSLCRG00005012769)	MBOAT2 (ENSLCRG00005012815)	asap2a (ENSLCRG00005013183) #19	itgb1bp1 (ENSLCRG00005013206) #21	CPSF3 (ENSLCRG00005013210) #22	DNAJC30 (ENSLCRG00005013786)	iah1 (ENSLCRG00005013787) #23	adam17a (ENSLCRG00005013789) #24	ywhaqb (ENSLCRG00005014648) ##25	grhl1 (ENSLCRG00005014649) #28	ENSLCRG00005014654	dnaaf2 (ENSLCRG00005014655)	lrr1 (ENSLCRG00005014656)	ENSLCRG00005014659	RPAP1 (ENSLCRG00005014660)	ltk (ENSLCRG00005014681)	itpka (ENSLCRG00005014802)	PNMT (ENSLCRG00005014803)	ivd (ENSLCRG00005014804)	ENSLCRG00005014805
European seabass	MODERN SPECIES	2	NT5E (ENSDLAG00005000098)	HTR1B (ENSDLAG00005000083)	ENSDLAG00005000076	MYO6 (ENSDLAG00005023283)	colec11 (ENSDLAG00005023271)	ENSDLAG00005023263	sox11a (ENSDLAG00005023259)	CMPK2 (ENSDLAG00005023255)	rsad2 (ENSDLAG00005030006)	id2a (ENSDLAG00005023242)	KIDINS220 (ENSDLAG00005023139)	MBOAT2 (ENSDLAG00005022959)	asap2a (ENSDLAG00005022506) #19	itgb1bp1 (ENSDLAG00005031190) #21	ENSDLAG00005022276	CPSF3 (ENSDLAG00005033990) #22	adam17a (ENSDLAG00005021725) #24	GRHL1 (ENSDLAG00005021618) #28	ENSDLAG00005029103	ENSDLAG00005031012 #29	ENSDLAG00005021601	ENSDLAG00005021510	ltk (ENSDLAG00005021193)	ENSDLAG00005021176	itpka (ENSDLAG00005028676)	ivd (ENSDLAG00005021129)	BAHD1 (ENSDLAG00005021123)	ENSDLAG00005021116	ccdc32 (ENSDLAG00005028688)	rpusd2 (ENSDLAG00005029510)	disp2 (ENSDLAG00005029831)
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28
Aplocheiloidei	ANCESTRAL SPECIES	15	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT00390000003967.a	ENSGT00940000158100	ENSGT00940000166410	ENSGT00940000164602	ENSGT00390000007594	ENSGT00390000008069 #23	ENSGT00940000155443.c #24	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000162008	ENSGT00390000014780
Mangrove rivulus	MODERN SPECIES	1	SNX14 (ENSKMAG00000008141)	HTR1B (ENSKMAG00000008060)	ENSKMAG00000008023	myo6b (ENSKMAG00000007926)	colec11 (ENSKMAG00000007884)	ENSKMAG00000007798	sox11a (ENSKMAG00000007776)	CMPK2 (ENSKMAG00000007763)	rsad2 (ENSKMAG00000007745)	rnf144aa (ENSKMAG00000007711)	id2a (ENSKMAG00000007700)	KIDINS220 (ENSKMAG00000007490)	MBOAT2 (ENSKMAG00000007430)	asap2a (ENSKMAG00000007390) #19	itgb1bp1 (ENSKMAG00000007363) #21	CPSF3 (ENSKMAG00000007317) #22	ENSKMAG00000007295	lrr1 (ENSKMAG00000007271)	dnaaf2 (ENSKMAG00000007233)	klf11b (ENSKMAG00000007225) #29	grhl1 (ENSKMAG00000007146) #28	ENSKMAG00000007112	ivd (ENSKMAG00000007064)	itpka (ENSKMAG00000007012)	ltk (ENSKMAG00000006904)	RPAP1 (ENSKMAG00000006842)	iah1 (ENSKMAG00000006786) #23	adam17a (ENSKMAG00000006736) #24	ywhaqb (ENSKMAG00000006715) ##25	PRLHR (ENSKMAG00000006690)	ccdc32 (ENSKMAG00000006672)
Turquoise killifish	MODERN SPECIES	1625	ENSNFUG00015009735	myo6b (ENSNFUG00015009873)	colec11 (ENSNFUG00015010183)	ENSNFUG00015010280	ENSNFUG00015010291	sox11a (ENSNFUG00015010294)	CMPK2 (ENSNFUG00015010303)	RSAD2 (ENSNFUG00015010312)	RNF144AA (ENSNFUG00015010324)	ENSNFUG00015010338	ID2 (ENSNFUG00015010343)	KIDINS220 (ENSNFUG00015010375)	MBOAT2A (ENSNFUG00015010505)	asap2a (ENSNFUG00015011782) #19	ITGB1BP1 (ENSNFUG00015019885) #21	CPSF3 (ENSNFUG00015019899) #22	DNAJC30 (ENSNFUG00015019949)	ENSNFUG00015019955	LRR1 (ENSNFUG00015019957)	dnaaf2 (ENSNFUG00015019960)	KLF11B (ENSNFUG00015019964) #29	grhl1 (ENSNFUG00015019980) #28	ENSNFUG00015020025	ivd (ENSNFUG00015020035)	ITPKA (ENSNFUG00015020139)	ltk (ENSNFUG00015020170)	RPAP1 (ENSNFUG00015014075)	iah1 (ENSNFUG00015014802) #23	ADAM17A (ENSNFUG00015014926) #24	YWHAQ (ENSNFUG00015015956) ##25	PRLHR (ENSNFUG00015015987)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c	ENSGT01030000234534.A.c.a
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c	ENSGT01030000234534.A.c.a
Poecilia	ANCESTRAL SPECIES	10	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c	ENSGT01030000234534.A.c.a
NAME_6	ANCESTRAL SPECIES	192		ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01030000235064	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a
Amazon molly	MODERN SPECIES	428	ENSPFOG00000012635	MYO6 (ENSPFOG00000012146)	colec11 (ENSPFOG00000012098)	ENSPFOG00000012080	sox11a (ENSPFOG00000012067)	sox11a (ENSPFOG00000012053)	CMPK2 (ENSPFOG00000012030)	rsad2 (ENSPFOG00000011996)	rnf144aa (ENSPFOG00000011914)	id2a (ENSPFOG00000011911)	KIDINS220 (ENSPFOG00000011369)	MBOAT2 (ENSPFOG00000011153)	asap2a (ENSPFOG00000010657) #19	itgb1bp1 (ENSPFOG00000010590) #21	DNAJC30 (ENSPFOG00000019928)	CPSF3 (ENSPFOG00000010418) #22	ENSPFOG00000019927	ENSPFOG00000010399	kdm1a (ENSPFOG00000010119)	tmem30b (ENSPFOG00000010043)	DYNC1H1 (ENSPFOG00000008709)	WDR20 (ENSPFOG00000008646)	MOK (ENSPFOG00000008579)	NEMF (ENSPFOG00000008250)	KLHDC2 (ENSPFOG00000007953)	pole2 (ENSPFOG00000007749)	ENSPFOG00000007541
Sailfin molly	MODERN SPECIES	2116														itgb1bp1 (ENSPLAG00000021249) #21	ENSPLAG00000021271 #22	CPSF3 (ENSPLAG00000021300) #22	ENSPLAG00000021313	ENSPLAG00000021339	ENSPLAG00000021343	kdm1a (ENSPLAG00000021417)	tmem30b (ENSPLAG00000021440)
Guppy	MODERN SPECIES	2											ENSPREG00000004274	MBOAT2 (ENSPREG00000004303)	ENSPREG00000004342	asap2a (ENSPREG00000004371) #19	itgb1bp1 (ENSPREG00000004452) #21	CPSF3 (ENSPREG00000004482) #22	DNAJC30 (ENSPREG00000004507)	ENSPREG00000004510	LUZP1 (ENSPREG00000004522)	kdm1a (ENSPREG00000004563)	tmem30b (ENSPREG00000004674)	ENSPREG00000004704	ENSPREG00000004748	ENSPREG00000004763	WDR20 (ENSPREG00000004783)	MOK (ENSPREG00000004794)	ENSPREG00000004826	ENSPREG00000004851	KLHDC2 (ENSPREG00000004875)	pole2 (ENSPREG00000004895)	ENSPREG00000004967
Platyfish	MODERN SPECIES	10	SNX14 (ENSXMAG00000007897)	HTR1B (ENSXMAG00000019721)	ENSXMAG00000007941	MYO6 (ENSXMAG00000007951)	ENSXMAG00000027282	colec11 (ENSXMAG00000008006)	ENSXMAG00000008014	sox11a (ENSXMAG00000025941)	CMPK2 (ENSXMAG00000008016)	rsad2 (ENSXMAG00000008017)	rnf144aa (ENSXMAG00000028111)	KIDINS220 (ENSXMAG00000011964)	MBOAT2 (ENSXMAG00000008038)	asap2a (ENSXMAG00000008066) #19	itgb1bp1 (ENSXMAG00000008120) #21	CPSF3 (ENSXMAG00000027291) #22	DNAJC30 (ENSXMAG00000006114)	ENSXMAG00000006108	ENSXMAG00000006107	kdm1a (ENSXMAG00000008128)	tmem30b (ENSXMAG00000008132)	DYNC1H1 (ENSXMAG00000008140)	ENSXMAG00000027216	ENSXMAG00000029029	ENSXMAG00000024142	ENSXMAG00000025372	WDR20 (ENSXMAG00000008176)	MOK (ENSXMAG00000008180)	NEMF (ENSXMAG00000009024)	KLHDC2 (ENSXMAG00000028153)	pole2 (ENSXMAG00000008186)
NAME_4	ANCESTRAL SPECIES	105	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01020000230703	ENSGT00940000156103	ENSGT01030000235064	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b
Mummichog	MODERN SPECIES	2244	SNX14 (ENSFHEG00000012903)	HTR1B (ENSFHEG00000012822)	myo6b (ENSFHEG00000012801)	colec11 (ENSFHEG00000012712)	ENSFHEG00000012664	sox11a (ENSFHEG00000012641)	CMPK2 (ENSFHEG00000012621)	rsad2 (ENSFHEG00000012614)	rnf144aa (ENSFHEG00000012596)	id2a (ENSFHEG00000012574)	KIDINS220 (ENSFHEG00000012566)	MBOAT2 (ENSFHEG00000012500)	asap2a (ENSFHEG00000012429) #19	itgb1bp1 (ENSFHEG00000012238) #21	ENSFHEG00000012215 #22	CPSF3 (ENSFHEG00000012186) #22	DNAJC30 (ENSFHEG00000012148)	ENSFHEG00000012134	ENSFHEG00000012123	kdm1a (ENSFHEG00000012094)	tmem30b (ENSFHEG00000011973)	DYNC1H1 (ENSFHEG00000011956)	ENSFHEG00000011890	ENSFHEG00000011881	ENSFHEG00000011872	WDR20 (ENSFHEG00000011859)	MOK (ENSFHEG00000011835)	NEMF (ENSFHEG00000011806)	KLHDC2 (ENSFHEG00000011732)	pole2 (ENSFHEG00000011709)	ENSFHEG00000011617
Sheepshead minnow	MODERN SPECIES	219						ENSCVAG00000015549	ENSCVAG00000015532	ENSCVAG00000015524	CMPK2 (ENSCVAG00000015515)	rsad2 (ENSCVAG00000015507)	rnf144aa (ENSCVAG00000001004)	KIDINS220 (ENSCVAG00000015387)	MBOAT2 (ENSCVAG00000015308)	asap2a (ENSCVAG00000015257) #19	itgb1bp1 (ENSCVAG00000015089) #21	CPSF3 (ENSCVAG00000015067) #22	DNAJC30 (ENSCVAG00000015005)	ENSCVAG00000000382	LUZP1 (ENSCVAG00000014975)	kdm1a (ENSCVAG00000014939)	tmem30b (ENSCVAG00000014860)	DYNC1H1 (ENSCVAG00000014569)	ENSCVAG00000014503	ENSCVAG00000014480	cacng1a (ENSCVAG00000014461)	CACNG4 (ENSCVAG00000014430)	cacng5a (ENSCVAG00000014412)	prkcaa (ENSCVAG00000014380)
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Cichlidae	ANCESTRAL SPECIES	22	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT01030000234566.e.b.a.a.b	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410
Midas cichlid	MODERN SPECIES	504	syncripl (ENSACIG00000023552)	SNX14 (ENSACIG00000023560)	nt5e (ENSACIG00000023576)	ENSACIG00000023589	colec11 (ENSACIG00000023591)	ENSACIG00000023597	sox11a (ENSACIG00000023604)	CMPK2 (ENSACIG00000023607)	rsad2 (ENSACIG00000023611)	rnf144aa (ENSACIG00000023614)	id2a (ENSACIG00000023623)	KIDINS220 (ENSACIG00000023634)	MBOAT2 (ENSACIG00000023644)	asap2a (ENSACIG00000023651) #19	itgb1bp1 (ENSACIG00000023656) #21	CPSF3 (ENSACIG00000023663) #22	ENSACIG00000023669	ENSACIG00000023673	lrr1 (ENSACIG00000023676)	dnaaf2 (ENSACIG00000023679)	klf11b (ENSACIG00000023687) #29	grhl1 (ENSACIG00000023709) #28	ywhaqb (ENSACIG00000023775) ##25	adam17a (ENSACIG00000023988) #24	ENSACIG00000023993	iah1 (ENSACIG00000023998) #23	RPAP1 (ENSACIG00000024002)	ltk (ENSACIG00000024009)	itpka (ENSACIG00000024016)	ivd (ENSACIG00000024018)	ENSACIG00000024020
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT01030000234566.e.b.a.a.b	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410
Nile tilapia	MODERN SPECIES	10	nt5e (ENSONIG00000003636)	HTR1B (ENSONIG00000020630)	ENSONIG00000003638	myo6b (ENSONIG00000003639)	colec11 (ENSONIG00000003648)	ENSONIG00000003654	sox11a (ENSONIG00000020631)	CMPK2 (ENSONIG00000003657)	rsad2 (ENSONIG00000003658)	rnf144aa (ENSONIG00000003661)	id2a (ENSONIG00000003666)	KIDINS220 (ENSONIG00000003667)	MBOAT2 (ENSONIG00000003677)	asap2a (ENSONIG00000003679) #19	itgb1bp1 (ENSONIG00000003692) #21	CPSF3 (ENSONIG00000003694) #22	DNAJC30 (ENSONIG00000003697)	ENSONIG00000037802	ENSONIG00000003699	lrr1 (ENSONIG00000041270)	ENSONIG00000003703	klf11 (ENSONIG00000003704) #29	grhl1 (ENSONIG00000003707) #28	ywhaqb (ENSONIG00000003712) ##25	adam17a (ENSONIG00000003714) #24	ENSONIG00000036047	nudt22 (ENSONIG00000036618)	iah1 (ENSONIG00000020093) #23	ENSONIG00000020094	iah1 (ENSONIG00000032222) #23	ENSONIG00000020095
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT01030000234566.e.b.a.a.b	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410
Lyretail cichlid	MODERN SPECIES	299		HTR1B (ENSNBRG00000011065)	ENSNBRG00000011048	myo6b (ENSNBRG00000010983)	colec11 (ENSNBRG00000010953)	sox11a (ENSNBRG00000010925)	CMPK2 (ENSNBRG00000010902)	rsad2 (ENSNBRG00000010881)	rnf144aa (ENSNBRG00000010857)	id2a (ENSNBRG00000010844)	KIDINS220 (ENSNBRG00000010767)	MBOAT2 (ENSNBRG00000010697)	ENSNBRG00000010674	ENSNBRG00000010603 #19	itgb1bp1 (ENSNBRG00000010578) #21	CPSF3 (ENSNBRG00000010525) #22	DNAJC30 (ENSNBRG00000010503)	ENSNBRG00000010486	lrr1 (ENSNBRG00000010478)	ENSNBRG00000010465	klf11b (ENSNBRG00000010457) #29	grhl1 (ENSNBRG00000010427) #28	ywhaqb (ENSNBRG00000010401) ##25	adam17a (ENSNBRG00000010379) #24	ENSNBRG00000010350	iah1 (ENSNBRG00000010337) #23	ENSNBRG00000010269	ltk (ENSNBRG00000010198)	itpka (ENSNBRG00000010168)	ivd (ENSNBRG00000010158)	BAHD1 (ENSNBRG00000010126)
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT00490000044642.a.a.a.a.a.b.b.d	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100
Burton s mouthbrooder	MODERN SPECIES	1095														ENSHBUG00000014419 #19	itgb1bp1 (ENSHBUG00000014392) #21	CPSF3 (ENSHBUG00000014332) #22	ENSHBUG00000014306	ENSHBUG00000014293	lrr1 (ENSHBUG00000014286)	ENSHBUG00000014265	ENSHBUG00000014258	grhl1 (ENSHBUG00000014242) #28	ywhaqb (ENSHBUG00000014201) ##25	adam17a (ENSHBUG00000014164) #24
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT00490000044642.a.a.a.a.a.b.b.d	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100
P. nyererei	MODERN SPECIES	305	SNX14 (ENSPNYG00000020425)	nt5e (ENSPNYG00000020564)	HTR1B (ENSPNYG00000020596)	myo6b (ENSPNYG00000020617)	colec11 (ENSPNYG00000020689)	ENSPNYG00000020715	sox11a (ENSPNYG00000020727)	CMPK2 (ENSPNYG00000020756)	rsad2 (ENSPNYG00000020767)	rnf144aa (ENSPNYG00000020780)	id2a (ENSPNYG00000020798)	KIDINS220 (ENSPNYG00000020827)	MBOAT2 (ENSPNYG00000020920)	asap2a (ENSPNYG00000020960) #19	itgb1bp1 (ENSPNYG00000021027) #21	CPSF3 (ENSPNYG00000021047) #22	ENSPNYG00000021077	lrr1 (ENSPNYG00000021083)	ENSPNYG00000021095	ENSPNYG00000021117	grhl1 (ENSPNYG00000021143) #28	ywhaqb (ENSPNYG00000021165) ##25	adam17a (ENSPNYG00000021186) #24	ENSPNYG00000021263	iah1 (ENSPNYG00000021313) #23	ENSPNYG00000021343	ltk (ENSPNYG00000021387)	itpka (ENSPNYG00000021427)	ivd (ENSPNYG00000021441)	ENSPNYG00000021472	PRLHR (ENSPNYG00000021484)
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000157612 #28	ENSGT01090000260040.b.b.b.a.n ##25	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594.e	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000155825.r.b	ENSGT00940000154596.b.m.b.b	ENSGT00940000158100	ENSGT00390000003967.a
Eastern happy	MODERN SPECIES	10	HTR1B (ENSACLG00000017966)	ENSACLG00000017993	myo6b (ENSACLG00000018057)	colec11 (ENSACLG00000018173)	ENSACLG00000018201	sox11a (ENSACLG00000018253)	CMPK2 (ENSACLG00000018300)	rsad2 (ENSACLG00000018305)	rnf144aa (ENSACLG00000018318)	ENSACLG00000018346	id2a (ENSACLG00000018370)	KIDINS220 (ENSACLG00000018395)	MBOAT2 (ENSACLG00000018621)	asap2a (ENSACLG00000018689) #19	itgb1bp1 (ENSACLG00000018819) #21	CPSF3 (ENSACLG00000018846) #22	DNAJC30 (ENSACLG00000018883)	ENSACLG00000018896	lrr1 (ENSACLG00000018902)	ENSACLG00000018923	ENSACLG00000018930	grhl1 (ENSACLG00000018976) #28	ywhaqb (ENSACLG00000019060) ##25	ENSACLG00000019091 #23	ENSACLG00000019107	ltk (ENSACLG00000019181)	itpka (ENSACLG00000019261)	CYTH3 (ENSACLG00000019302)	ENSACLG00000019328	ENSACLG00000019336	ivd (ENSACLG00000019347)
Zebra mbuna	MODERN SPECIES	1101	SNX14 (ENSMZEG00005005563)	nt5e (ENSMZEG00005005679)	HTR1B (ENSMZEG00005005700)	myo6b (ENSMZEG00005005718)	colec11 (ENSMZEG00005005759)	sox11a (ENSMZEG00005005783)	CMPK2 (ENSMZEG00005005795)	rsad2 (ENSMZEG00005005804)	rnf144aa (ENSMZEG00005005823)	ENSMZEG00005005837	id2a (ENSMZEG00005005852)	KIDINS220 (ENSMZEG00005005897)	MBOAT2 (ENSMZEG00005006092)	asap2a (ENSMZEG00005006144) #19	itgb1bp1 (ENSMZEG00005006230) #21	CPSF3 (ENSMZEG00005006258) #22	ENSMZEG00005006331	ENSMZEG00005006350	lrr1 (ENSMZEG00005006361)	ENSMZEG00005006380	ENSMZEG00005006395	grhl1 (ENSMZEG00005006420) #28	ywhaqb (ENSMZEG00005006438) ##25	adam17a (ENSMZEG00005006451) #24	ENSMZEG00005006476	iah1 (ENSMZEG00005006516) #23	ENSMZEG00005006585	ltk (ENSMZEG00005006632)	itpka (ENSMZEG00005006738)	ENSMZEG00005006748	ENSMZEG00005006768
Pomacentridae	ANCESTRAL SPECIES	19	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Bicolor damselfish	MODERN SPECIES	686															itgb1bp1 (ENSSPAG00000002880) #21	CPSF3 (ENSSPAG00000002906) #22	ENSSPAG00000002995	ENSSPAG00000003005	lrr1 (ENSSPAG00000003023)	dnaaf2 (ENSSPAG00000003039)	klf11b (ENSSPAG00000003047) #29	grhl1 (ENSSPAG00000003067) #28	ENSSPAG00000003140	adam17a (ENSSPAG00000003153) #24	iah1 (ENSSPAG00000003244) #23	RPAP1 (ENSSPAG00000003269)	ltk (ENSSPAG00000003359)	itpka (ENSSPAG00000003448)	ivd (ENSSPAG00000003462)	ENSSPAG00000003499	PRLHR (ENSSPAG00000003514)
Pomacentridae_A	ANCESTRAL SPECIES	19	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Spiny chromis	MODERN SPECIES	13	syncripl (ENSAPOG00000013389)	SNX14 (ENSAPOG00000013313)	nt5e (ENSAPOG00000013170)	myo6b (ENSAPOG00000012997)	colec11 (ENSAPOG00000012840)	ENSAPOG00000012793	sox11a (ENSAPOG00000012759)	rsad2 (ENSAPOG00000012740)	CMPK2 (ENSAPOG00000012698)	rnf144aa (ENSAPOG00000012675)	id2a (ENSAPOG00000012632)	KIDINS220 (ENSAPOG00000012604)	MBOAT2 (ENSAPOG00000012495)	asap2a (ENSAPOG00000012445) #19	itgb1bp1 (ENSAPOG00000012283) #21	CPSF3 (ENSAPOG00000012241) #22
Amphiprion	ANCESTRAL SPECIES	12	ENSGT00530000063775.a.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00940000158830	ENSGT00510000048466	ENSGT00940000155982.e.a #29	ENSGT00940000157612 #28	ENSGT01090000260061.c.a.d.b.a.b	ENSGT00940000155443.c #24	ENSGT00390000008069 #23	ENSGT00390000007594	ENSGT00940000164602	ENSGT00940000166410	ENSGT00940000158100	ENSGT00390000003967.a	ENSGT00940000162008
Orange clownfish	MODERN SPECIES	9	nt5e (ENSAPEG00000020431)	HTR1B (ENSAPEG00000020445)	ENSAPEG00000020461	myo6b (ENSAPEG00000020486)	colec11 (ENSAPEG00000020543)	ENSAPEG00000020558	sox11a (ENSAPEG00000020575)	CMPK2 (ENSAPEG00000020584)	rsad2 (ENSAPEG00000020627)	rnf144aa (ENSAPEG00000020647)	id2a (ENSAPEG00000020671)	KIDINS220 (ENSAPEG00000020697)	MBOAT2 (ENSAPEG00000020881)	asap2a (ENSAPEG00000021017) #19	itgb1bp1 (ENSAPEG00000021111) #21	CPSF3 (ENSAPEG00000021167) #22	ENSAPEG00000021253	ENSAPEG00000021268	lrr1 (ENSAPEG00000021284)	ENSAPEG00000021304	klf11b (ENSAPEG00000021311) #29	grhl1 (ENSAPEG00000021330) #28	ENSAPEG00000021422	adam17a (ENSAPEG00000021451) #24	iah1 (ENSAPEG00000021499) #23	RPAP1 (ENSAPEG00000021512)	ltk (ENSAPEG00000021553)	itpka (ENSAPEG00000021626)	ivd (ENSAPEG00000021638)	ENSAPEG00000021667	PRLHR (ENSAPEG00000021688)
Clown anemonefish	MODERN SPECIES	623									rnf144aa (ENSAOCG00000010367)	ENSAOCG00000010360	id2a (ENSAOCG00000010346)	KIDINS220 (ENSAOCG00000010304)	MBOAT2 (ENSAOCG00000010155)	asap2a (ENSAOCG00000010132) #19	itgb1bp1 (ENSAOCG00000010105) #21	CPSF3 (ENSAOCG00000010077) #22	ENSAOCG00000010017	ENSAOCG00000010004	lrr1 (ENSAOCG00000009990)	ENSAOCG00000009963	klf11b (ENSAOCG00000009957) #29	grhl1 (ENSAOCG00000009930) #28	ENSAOCG00000009844	adam17a (ENSAOCG00000009796) #24	iah1 (ENSAOCG00000009714) #23	RPAP1 (ENSAOCG00000009681)
Pinecone sodierfish	MODERN SPECIES	14	HTR1B (ENSMMDG00005006213)	ENSMMDG00005006216	myo6b (ENSMMDG00005006304)	colec11 (ENSMMDG00005008276)	ENSMMDG00005008280	sox11a (ENSMMDG00005008290)	CMPK2 (ENSMMDG00005008293)	rsad2 (ENSMMDG00005008298)	rnf144aa (ENSMMDG00005008304)	ENSMMDG00005008305	id2a (ENSMMDG00005008308)	KIDINS220 (ENSMMDG00005008339)	MBOAT2 (ENSMMDG00005009539)	asap2a (ENSMMDG00005009659) #19	itgb1bp1 (ENSMMDG00005009894) #21	CPSF3 (ENSMMDG00005009911) #22	DNAJC30 (ENSMMDG00005009999)	iah1 (ENSMMDG00005010004) #23	adam17a (ENSMMDG00005010057) #24	ywhaqa (ENSMMDG00005013779) ##25	grhl1 (ENSMMDG00005013786) #28	klf11b (ENSMMDG00005013797) #29	ENSMMDG00005013801	lrr1 (ENSMMDG00005013803)	ENSMMDG00005013806	RPAP1 (ENSMMDG00005013823)	ltk (ENSMMDG00005013968)	itpka (ENSMMDG00005014199)	ivd (ENSMMDG00005014215)	ENSMMDG00005014292	PRLHR (ENSMMDG00005014302)
Cod	MODERN SPECIES	18	HTR1B (ENSGMOG00000020373)	ENSGMOG00000010359	MYO6 (ENSGMOG00000010314)	colec11 (ENSGMOG00000016181)	ENSGMOG00000023197	sox11a (ENSGMOG00000025561)	CMPK2 (ENSGMOG00000010299)	rsad2 (ENSGMOG00000010291)	rnf144aa (ENSGMOG00000010275)	ENSGMOG00000024861	id2a (ENSGMOG00000010271)	KIDINS220 (ENSGMOG00000010191)	MBOAT2 (ENSGMOG00000010222)	asap2a (ENSGMOG00000011249) #19	itgb1bp1 (ENSGMOG00000011241) #21	CPSF3 (ENSGMOG00000011222) #22	ENSGMOG00000035887	iah1 (ENSGMOG00000011208) #23	adam17a (ENSGMOG00000011183) #24	ywhaqb (ENSGMOG00000011175) ##25	grhl1 (ENSGMOG00000011159) #28	KLF11 (ENSGMOG00000022974) #29	ENSGMOG00000029783	ENSGMOG00000011132	ENSGMOG00000023746	ENSGMOG00000011108	ltk (ENSGMOG00000011080)	itpka (ENSGMOG00000011073)	ivd (ENSGMOG00000011064)	BAHD1 (ENSGMOG00000023832)	ccdc32 (ENSGMOG00000011049)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c
Poecilia	ANCESTRAL SPECIES	10	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT01060000248676.b.a.b	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a	ENSGT00700000106116.a.b	ENSGT01030000234534.A.c.b.a.c
NAME_6	ANCESTRAL SPECIES	192			ENSGT00530000063503.a.b.g.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01030000235064	ENSGT00940000156103	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516.h	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a
Sailfin molly	MODERN SPECIES	2116															itgb1bp1 (ENSPLAG00000021249) #21	ENSPLAG00000021271 #22	CPSF3 (ENSPLAG00000021300) #22	ENSPLAG00000021313	ENSPLAG00000021339	ENSPLAG00000021343	kdm1a (ENSPLAG00000021417)	tmem30b (ENSPLAG00000021440)
NAME_4	ANCESTRAL SPECIES	105	ENSGT00940000153511.b.q	ENSGT00950000182856.a.b.a	ENSGT01010000222287.B.b.a.b.b.b	ENSGT00940000156078.c	ENSGT00940000159468	ENSGT00940000164359.b	ENSGT00940000161652.b.b	ENSGT00940000154030.a.b	ENSGT00390000013670	ENSGT00940000157701	ENSGT00940000156464	ENSGT00940000156714.a	ENSGT01030000234564.a.a.a.a.b.a	ENSGT00940000155623 #19	ENSGT00390000003990 #21	ENSGT00940000155699.b #22	ENSGT00940000155699.a.b #22	ENSGT00510000048685.g.b	ENSGT00390000013762.b.b	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000004660.C.a.b	ENSGT01020000230703	ENSGT00940000156103	ENSGT01030000235064	ENSGT00390000007686.b.c.b	ENSGT00940000159582	ENSGT00390000018516	ENSGT00940000157150	ENSGT00390000012435	ENSGT00940000157509.a
Mummichog	MODERN SPECIES	2244	syncripl (ENSFHEG00000012955)	SNX14 (ENSFHEG00000012903)	HTR1B (ENSFHEG00000012822)	myo6b (ENSFHEG00000012801)	colec11 (ENSFHEG00000012712)	ENSFHEG00000012664	sox11a (ENSFHEG00000012641)	CMPK2 (ENSFHEG00000012621)	rsad2 (ENSFHEG00000012614)	rnf144aa (ENSFHEG00000012596)	id2a (ENSFHEG00000012574)	KIDINS220 (ENSFHEG00000012566)	MBOAT2 (ENSFHEG00000012500)	asap2a (ENSFHEG00000012429) #19	itgb1bp1 (ENSFHEG00000012238) #21	ENSFHEG00000012215 #22	CPSF3 (ENSFHEG00000012186) #22	DNAJC30 (ENSFHEG00000012148)	ENSFHEG00000012134	ENSFHEG00000012123	kdm1a (ENSFHEG00000012094)	tmem30b (ENSFHEG00000011973)	DYNC1H1 (ENSFHEG00000011956)	ENSFHEG00000011890	ENSFHEG00000011881	ENSFHEG00000011872	WDR20 (ENSFHEG00000011859)	MOK (ENSFHEG00000011835)	NEMF (ENSFHEG00000011806)	KLHDC2 (ENSFHEG00000011732)	pole2 (ENSFHEG00000011709)
Sheepshead minnow	MODERN SPECIES	369					ccr6a (ENSCVAG00000022377)	ENSCVAG00000022362	ccr6a (ENSCVAG00000022348)	ENSCVAG00000022342	mboat2b (ENSCVAG00000022323)	kidins220b (ENSCVAG00000022317)	ENSCVAG00000022250	allc (ENSCVAG00000022240)	ENSCVAG00000022182	ENSCVAG00000022161	asap2b (ENSCVAG00000022117)	ENSCVAG00000022058 #22	cpsf3 (ENSCVAG00000022039) #22	ADAM17 (ENSCVAG00000022011) #24	taf1b (ENSCVAG00000021996) #27	klf11a (ENSCVAG00000021958) #29	RRM2 (ENSCVAG00000021949) #30	LGALS8 (ENSCVAG00000021927)	RRM2 (ENSCVAG00000021913) #30	ENSCVAG00000000876	tmem242 (ENSCVAG00000021882)	arid1b (ENSCVAG00000021865)	ENSCVAG00000021837	ENSCVAG00000021815	ENSCVAG00000021786	ENSCVAG00000021764	cotl1 (ENSCVAG00000021313)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155699.b #22
Goldfish	MODERN SPECIES	39	cracd (ENSCARG00000022762)	ENSCARG00000022775	ENSCARG00000022782	cyp2v1 (ENSCARG00000022794)	cyp2ad2 (ENSCARG00000022828)	ENSCARG00000022841	ENSCARG00000022846	sh3rf1 (ENSCARG00000022854)	ENSCARG00000022868	ENSCARG00000022873	ginm1 (ENSCARG00000022884)	anapc4 (ENSCARG00000022897)	PALLD (ENSCARG00000022936)	ENSCARG00000022995	ENSCARG00000023000	ENSCARG00000023003 #22	ENSCARG00000023015 #24	ywhaqa (ENSCARG00000023188) ##25	ENSCARG00000023223	eif2b4 (ENSCARG00000023238)	atraid (ENSCARG00000023422)	SNX17 (ENSCARG00000023436)	znf513a (ENSCARG00000023518)	ENSCARG00000023528	ENSCARG00000023549	FNDC4 (ENSCARG00000023561)	ENSCARG00000023602	sox7 (ENSCARG00000024471)	ENSCARG00000024482	tdh (ENSCARG00000024487)	mtmr9 (ENSCARG00000024500)
Elephant shark	MODERN SPECIES	1649						CMPK2 (ENSCMIG00000008524)	rsad2 (ENSCMIG00000008527)	rnf144aa (ENSCMIG00000008529)	id2a (ENSCMIG00000008530)	kidins220b (ENSCMIG00000008555)	mboat2b (ENSCMIG00000008612)	ENSCMIG00000008631	ENSCMIG00000008632	asap2a (ENSCMIG00000008687) #19	itgb1bp1 (ENSCMIG00000009018) #21	cpsf3 (ENSCMIG00000009078) #22	iah1 (ENSCMIG00000009265) #23	adam17a (ENSCMIG00000009330) #24	ywhaqa (ENSCMIG00000009566) ##25	ENSCMIG00000009569 #27	ENSCMIG00000009575 #28	klf11 (ENSCMIG00000009585) #29