Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Amniota	ANCESTRAL SPECIES	1	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Mammalia	ANCESTRAL SPECIES	38	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Theria	ANCESTRAL SPECIES	35	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Glires	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Rodentia	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982.b #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Marmotini	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069.k.a #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982.b #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Alpin marmot	MODERN SPECIES	6	ENSMMMG00000022860 #7	RPS7 (ENSMMMG00000022853) #8	COLEC11 (ENSMMMG00000022843) #9	ALLC (ENSMMMG00000022836) #10	DCDC2C (ENSMMMG00000022831) #11	ENSMMMG00000022822 #12	SOX11 (ENSMMMG00000022819) #13	CMPK2 (ENSMMMG00000022812) #14	RSAD2 (ENSMMMG00000022810) #15	RNF144A (ENSMMMG00000022809) #16	ID2 (ENSMMMG00000022803) #17	KIDINS220 (ENSMMMG00000022748) #18	MBOAT2 (ENSMMMG00000022735) #19	ASAP2 (ENSMMMG00000022671) #20	ITGB1BP1 (ENSMMMG00000022669) #21	CPSF3 (ENSMMMG00000022663) #22	IAH1 (ENSMMMG00000022658) #23	ADAM17 (ENSMMMG00000022654) #24	YWHAQ (ENSMMMG00000022652) #25	TAF1B (ENSMMMG00000022638) #26	GRHL1 (ENSMMMG00000022631) #27	KLF11 (ENSMMMG00000022629) #28	ENSMMMG00000022625 #29	ENSMMMG00000022624 #30	HPCAL1 (ENSMMMG00000022618) #31	ODC1 (ENSMMMG00000022615) #32	NOL10 (ENSMMMG00000022607) #33	ATP6V1C2 (ENSMMMG00000022583) #34	PDIA6 (ENSMMMG00000022575) #35	KCNF1 (ENSMMMG00000022573) #36	C2orf50 (ENSMMMG00000022565) #37
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069.k.a #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b ##25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982.b #28	ENSGT00390000013305.a.a.v.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Arctic ground squirrel	MODERN SPECIES								SOX11 (ENSUPAG00010012315) #13	CMPK2 (ENSUPAG00010012310) #14	RSAD2 (ENSUPAG00010012305) #15	RNF144A (ENSUPAG00010012263) #16	ID2 (ENSUPAG00010012253) #17	KIDINS220 (ENSUPAG00010012028) #18	MBOAT2 (ENSUPAG00010011957) #19	ASAP2 (ENSUPAG00010011650) #20	ITGB1BP1 (ENSUPAG00010011629) #21	CPSF3 (ENSUPAG00010011610) #22	ENSUPAG00010011577 ##23	ADAM17 (ENSUPAG00010011539) #24	YWHAQ (ENSUPAG00010011534) ##25	TAF1B (ENSUPAG00010011508) #26	GRHL1 (ENSUPAG00010011483) #27	KLF11 (ENSUPAG00010011457) #28	CYS1 (ENSUPAG00010011444) #29	HPCAL1 (ENSUPAG00010011428) #31	ODC1 (ENSUPAG00010011416) #32	NOL10 (ENSUPAG00010011386) #33	ATP6V1C2 (ENSUPAG00010011265) #34	PDIA6 (ENSUPAG00010011237) #35	KCNF1 (ENSUPAG00010011227) #36	C2orf50 (ENSUPAG00010011218) #37	SLC66A3 (ENSUPAG00010011204)
Squirrel	MODERN SPECIES	132	TRAPPC12 (ENSSTOG00000027157)	ADI1 (ENSSTOG00000029152)	RNASEH1 (ENSSTOG00000012774)	RPS7 (ENSSTOG00000024830) #8	COLEC11 (ENSSTOG00000020387) #9	ALLC (ENSSTOG00000002136) #10	DCDC2C (ENSSTOG00000020234) #11	CMPK2 (ENSSTOG00000019402) #14	RSAD2 (ENSSTOG00000006147) #15	RNF144A (ENSSTOG00000027570) #16	ID2 (ENSSTOG00000019401) #17	KIDINS220 (ENSSTOG00000013232) #18	MBOAT2 (ENSSTOG00000020147) #19	ASAP2 (ENSSTOG00000004398) #20	ITGB1BP1 (ENSSTOG00000004464) #21	CPSF3 (ENSSTOG00000004476) #22	ENSSTOG00000004500 #23	ADAM17 (ENSSTOG00000004510) #24	ENSSTOG00000024378 ##25	TAF1B (ENSSTOG00000002419) #26	GRHL1 (ENSSTOG00000019842) #27	ENSSTOG00000030936 #28	ENSSTOG00000033669 #30	HPCAL1 (ENSSTOG00000001514) #31	ENSSTOG00000000386 #32	NOL10 (ENSSTOG00000005485) #33	ATP6V1C2 (ENSSTOG00000005527) #34	PDIA6 (ENSSTOG00000005550) #35	C2orf50 (ENSSTOG00000002600) #37	SLC66A3 (ENSSTOG00000027023)	ROCK2 (ENSSTOG00000002624)
Eurasian red squirrel	MODERN SPECIES	5	ADI1 (ENSSVLG00005021776)	RNASEH1 (ENSSVLG00005021750)	ENSSVLG00005021713 ##8	COLEC11 (ENSSVLG00005021395) #9	ALLC (ENSSVLG00005021266) #10	DCDC2C (ENSSVLG00005021143) #11	SOX11 (ENSSVLG00005021089) #13	CMPK2 (ENSSVLG00005020981) #14	RSAD2 (ENSSVLG00005020911) #15	RNF144A (ENSSVLG00005020868) #16	ID2 (ENSSVLG00005020830) #17	KIDINS220 (ENSSVLG00005020790) #18	MBOAT2 (ENSSVLG00005020748) #19	ASAP2 (ENSSVLG00005020310) #20	ITGB1BP1 (ENSSVLG00005020179) #21	CPSF3 (ENSSVLG00005020098) #22	IAH1 (ENSSVLG00005019997) #23	ADAM17 (ENSSVLG00005019936) #24	YWHAQ (ENSSVLG00005019899) #25	ENSSVLG00005019881	ENSSVLG00005019695 #26	ENSSVLG00005019438 #27	KLF11 (ENSSVLG00005019337) #28	CYS1 (ENSSVLG00005019295) #29	ENSSVLG00005019233 ##30	HPCAL1 (ENSSVLG00005019176) #31	ENSSVLG00005019056 #32	NOL10 (ENSSVLG00005018977) #33	ENSSVLG00005018931	ATP6V1C2 (ENSSVLG00005018543) #34	PDIA6 (ENSSVLG00005018305) #35
Hystricomorpha	ANCESTRAL SPECIES	64														ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a.u.a ##30	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hystricomorpha_a	ANCESTRAL SPECIES	70	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13	ENSGT00940000162396 #11	ENSGT00390000001793 #10	ENSGT00940000159468 #9	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000003466	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671	ENSGT00940000157666	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Hystricomorpha_b	ANCESTRAL SPECIES	91	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13	ENSGT00940000162396 #11	ENSGT00390000001793 #10	ENSGT00940000159468 #9	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000003466	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671	ENSGT00940000157666	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a.v #30	ENSGT00390000013305.a.a.u.a ##30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Long-tailed chinchilla	MODERN SPECIES	194	CMPK2 (ENSCLAG00000002165) #14	SOX11 (ENSCLAG00000002180) #13	DCDC2C (ENSCLAG00000002204) #11	ALLC (ENSCLAG00000002247) #10	COLEC11 (ENSCLAG00000002289) #9	RPS7 (ENSCLAG00000002424) #8	RNASEH1 (ENSCLAG00000002440)	ADI1 (ENSCLAG00000002464)	TRAPPC12 (ENSCLAG00000002486)	EIPR1 (ENSCLAG00000002535)	ENSCLAG00000001592	MYT1L (ENSCLAG00000001644)	PXDN (ENSCLAG00000001727)	ASAP2 (ENSCLAG00000001989) #20	ITGB1BP1 (ENSCLAG00000002388) #21	CPSF3 (ENSCLAG00000002727) #22	IAH1 (ENSCLAG00000002879) #23	ADAM17 (ENSCLAG00000003055) #24	YWHAQ (ENSCLAG00000003576) ##25	TAF1B (ENSCLAG00000003776) #26	GRHL1 (ENSCLAG00000004000) #27	ENSCLAG00000004146 #28	RRM2 (ENSCLAG00000001926) #30	ENSCLAG00000002025	HPCAL1 (ENSCLAG00000002037) #31	ODC1 (ENSCLAG00000002140) #32	NOL10 (ENSCLAG00000002234) #33	ATP6V1C2 (ENSCLAG00000006612) #34	PDIA6 (ENSCLAG00000006956) #35	KCNF1 (ENSCLAG00000017968) #36	ENSCLAG00000007661
Degu	MODERN SPECIES	192										MYT1L (ENSODEG00000001544)	ENSODEG00000018668	PXDN (ENSODEG00000001228)	ASAP2 (ENSODEG00000001497) #20	ENSODEG00000018909	ENSODEG00000003101 #21	CPSF3 (ENSODEG00000003129) #22	IAH1 (ENSODEG00000003362) #23	ADAM17 (ENSODEG00000003472) #24	YWHAQ (ENSODEG00000001504) #25	ENSODEG00000001535	TAF1B (ENSODEG00000002052) #26	GRHL1 (ENSODEG00000002151) #27	ENSODEG00000002288 #28	RRM2 (ENSODEG00000002317) ##30	ENSODEG00000002415 #31	ODC1 (ENSODEG00000000437) #32	NOL10 (ENSODEG00000000508) #33	ATP6V1C2 (ENSODEG00000000754) #34	ENSODEG00000000842 #35	ENSODEG00000000975	ENSODEG00000000987
Guinea pig	MODERN SPECIES	75	RSAD2 (ENSCPOG00000008107) #15	CMPK2 (ENSCPOG00000001105) #14	SOX11 (ENSCPOG00000019507) #13	ENSCPOG00000022309 #11	ALLC (ENSCPOG00000014255) #10	COLEC11 (ENSCPOG00000032858) #9	RPS7 (ENSCPOG00000009795) #8	RNASEH1 (ENSCPOG00000022278)	ADI1 (ENSCPOG00000027219)	TRAPPC12 (ENSCPOG00000005749)	EIPR1 (ENSCPOG00000005737)	MYT1L (ENSCPOG00000013246)	PXDN (ENSCPOG00000011199)	ASAP2 (ENSCPOG00000010278) #20	ITGB1BP1 (ENSCPOG00000010293) #21	CPSF3 (ENSCPOG00000011299) #22	IAH1 (ENSCPOG00000011308) #23	ADAM17 (ENSCPOG00000011313) #24	YWHAQ (ENSCPOG00000011321) #25	ENSCPOG00000012839	MYCN (ENSCPOG00000020263)
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000041769	ENSHGLG00000035478	ENSHGLG00000032201	ENSHGLG00000043794	ENSHGLG00000040330	ENSHGLG00000040838	ENSHGLG00000036700	ENSHGLG00000032848	ENSHGLG00000042745	ENSHGLG00000049015	ENSHGLG00000044591	ENSHGLG00000033649	ENSHGLG00000040434	ENSHGLG00000000974 #20	ITGB1BP1 (ENSHGLG00000000877) #21	CPSF3 (ENSHGLG00000000666) #22	ENSHGLG00000000512 #23	ADAM17 (ENSHGLG00000000502) #24	ENSHGLG00000000473 #25	ENSHGLG00000000328	ENSHGLG00000049295	ENSHGLG00000049886	NBAS (ENSHGLG00000000885)	ENSHGLG00000047840	LRATD1 (ENSHGLG00000004468)	ENSHGLG00000005931	ENSHGLG00000001922	TRIB2 (ENSHGLG00000050246)	LPIN1 (ENSHGLG00000000436)	NTSR2 (ENSHGLG00000048775)	ENSHGLG00000000910
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Kangaroo rat	MODERN SPECIES	339									Rsad2 (ENSDORG00000008537) #15	Rnf144a (ENSDORG00000010145) #16	Id2 (ENSDORG00000014815) #17	Kidins220 (ENSDORG00000014817) #18	Mboat2 (ENSDORG00000007348) #19	Asap2 (ENSDORG00000014261) #20	Itgb1bp1 (ENSDORG00000014262) #21	Cpsf3 (ENSDORG00000014263) #22	Adam17 (ENSDORG00000014267) #24	ENSDORG00000028741 ##25	Taf1b (ENSDORG00000010154) #26	ENSDORG00000028599 #27	ENSDORG00000024766 #27	ENSDORG00000024620 #28	Rrm2 (ENSDORG00000002514) #30	Hpcal1 (ENSDORG00000007055) #31	Odc1 (ENSDORG00000002669) #32	Nol10 (ENSDORG00000001331) #33	Atp6v1c2 (ENSDORG00000003593) #34	Pdia6 (ENSDORG00000003594) #35	Kcnf1 (ENSDORG00000026132) #36	ENSDORG00000027660 #37	Pqlc3 (ENSDORG00000025612)
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Lesser Egyptian jerboa	MODERN SPECIES	74		Sos1 (ENSJJAG00000013772)	Arhgef33 (ENSJJAG00000001327)	ENSJJAG00000018800	Dhx57 (ENSJJAG00000023202)	ENSJJAG00000024348	Gemin6 (ENSJJAG00000021310)	Ttc39d (ENSJJAG00000012034)	ENSJJAG00000023079	Galm (ENSJJAG00000023585)	Hnrnpll (ENSJJAG00000024192)	Kidins220 (ENSJJAG00000015011) #18	Mboat2 (ENSJJAG00000011516) #19	Asap2 (ENSJJAG00000001039) #20	Itgb1bp1 (ENSJJAG00000022716) #21	Cpsf3 (ENSJJAG00000023415) #22	Iah1 (ENSJJAG00000015466) #23	Adam17 (ENSJJAG00000020057) #24	Ywhaq (ENSJJAG00000008194) #25	ENSJJAG00000011210	Plek (ENSJJAG00000005757)	Cnrip1 (ENSJJAG00000016204)	Ppp3r1 (ENSJJAG00000016869)	Pno1 (ENSJJAG00000022862)	Dnaaf10 (ENSJJAG00000019935)	ENSJJAG00000023186	ENSJJAG00000021064	ENSJJAG00000011226	Meis1 (ENSJJAG00000015459)	Spred2 (ENSJJAG00000020977)	Actr2 (ENSJJAG00000008642)
Muroidea	ANCESTRAL SPECIES	21	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1517	Rnaseh1 (ENSNGAG00000015966)	Rps7 (ENSNGAG00000015037) #8	Colec11 (ENSNGAG00000014244) #9	Allc (ENSNGAG00000004596) #10	ENSNGAG00000002422 #11	ENSNGAG00000017946	Sox11 (ENSNGAG00000016772) #13	Cmpk2 (ENSNGAG00000020998) #14	Rsad2 (ENSNGAG00000020530) #15	Rnf144a (ENSNGAG00000018727) #16	Id2 (ENSNGAG00000018053) #17	Kidins220 (ENSNGAG00000012753) #18	Mboat2 (ENSNGAG00000004975) #19	Asap2 (ENSNGAG00000020450) #20	Itgb1bp1 (ENSNGAG00000015478) #21	Cpsf3 (ENSNGAG00000019836) #22	Iah1 (ENSNGAG00000017153) #23	Adam17 (ENSNGAG00000016571) #24	Ywhaq (ENSNGAG00000012388) #25	ENSNGAG00000015636	Taf1b (ENSNGAG00000010048) #26	Grhl1 (ENSNGAG00000004562) #27	Klf11 (ENSNGAG00000018758) #28	Cys1 (ENSNGAG00000015080) #29	Rrm2 (ENSNGAG00000013008) ##30	Hpcal1 (ENSNGAG00000012465) #31	ENSNGAG00000001599 #32	ENSNGAG00000019061	Nol10 (ENSNGAG00000015506) #33	Atp6v1c2 (ENSNGAG00000000867) #34	Pdia6 (ENSNGAG00000014585) #35
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Prairie vole	MODERN SPECIES	93							Cmpk2 (ENSMOCG00000000423) #14	ENSMOCG00000020673 #15	Rnf144a (ENSMOCG00000000314) #16	ENSMOCG00000012398	Id2 (ENSMOCG00000002908) #17	Kidins220 (ENSMOCG00000011232) #18	Mboat2 (ENSMOCG00000021674) #19	Asap2 (ENSMOCG00000019749) #20	Itgb1bp1 (ENSMOCG00000017072) #21	Cpsf3 (ENSMOCG00000020067) #22	Iah1 (ENSMOCG00000017872) #23	Adam17 (ENSMOCG00000010700) #24	Ywhaq (ENSMOCG00000020316) #25	Taf1b (ENSMOCG00000005916) #26	Grhl1 (ENSMOCG00000019210) #27	ENSMOCG00000003070	ENSMOCG00000014995 #28	Cys1 (ENSMOCG00000017656) #29	ENSMOCG00000018114 #30	ENSMOCG00000010909 #30	Hpcal1 (ENSMOCG00000014411) #31	ENSMOCG00000010314 #32	Nol10 (ENSMOCG00000021564) #33	Atp6v1c2 (ENSMOCG00000019580) #34	Pdia6 (ENSMOCG00000014991) #35
Northern American deer mouse	MODERN SPECIES	14	Adi1 (ENSPEMG00000022007)	Rnaseh1 (ENSPEMG00000022465)	Rps7 (ENSPEMG00000011185) #8	Colec11 (ENSPEMG00000021365) #9	Allc (ENSPEMG00000022050) #10	ENSPEMG00000022353 #11	Sox11 (ENSPEMG00000014211) #13	Cmpk2 (ENSPEMG00000009342) #14	Rsad2 (ENSPEMG00000008928) #15	Rnf144a (ENSPEMG00000008311) #16	Id2 (ENSPEMG00000006926) #17	Kidins220 (ENSPEMG00000002148) #18	Mboat2 (ENSPEMG00000000110) #19	Asap2 (ENSPEMG00000016930) #20	Itgb1bp1 (ENSPEMG00000012447) #21	Cpsf3 (ENSPEMG00000017668) #22	Iah1 (ENSPEMG00000016641) #23	Adam17 (ENSPEMG00000015840) #24	ENSPEMG00000027877 ##25	Taf1b (ENSPEMG00000013642) #26	Grhl1 (ENSPEMG00000012157) #27	Klf11 (ENSPEMG00000011311) #28	Cys1 (ENSPEMG00000025881) #29	Rrm2 (ENSPEMG00000010359) #30	Hpcal1 (ENSPEMG00000025119) #31	Nol10 (ENSPEMG00000008676) #33	Atp6v1c2 (ENSPEMG00000007660) #34	Pdia6 (ENSPEMG00000002821) #35	Kcnf1 (ENSPEMG00000013250) #36	ENSPEMG00000025861 #37	Pqlc3 (ENSPEMG00000020282)
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.g #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Chinese hamster chok1gshd	MODERN SPECIES	229	Rnaseh1 (ENSCGRG00001008950)	Rps7 (ENSCGRG00001017318) #8	Colec11 (ENSCGRG00001015605) #9	Allc (ENSCGRG00001009626) #10	ENSCGRG00001022074 #11	Sox11 (ENSCGRG00001007958) #13	Cmpk2 (ENSCGRG00001018716) #14	Rsad2 (ENSCGRG00001014337) #15	Rnf144a (ENSCGRG00001007035) #16	ENSCGRG00001023880	Id2 (ENSCGRG00001023029) #17	Kidins220 (ENSCGRG00001016681) #18	Mboat2 (ENSCGRG00001015841) #19	Asap2 (ENSCGRG00001022680) #20	Itgb1bp1 (ENSCGRG00001000664) #21	Cpsf3 (ENSCGRG00001013134) #22	Iah1 (ENSCGRG00001019624) #23	Adam17 (ENSCGRG00001024922) #24	Ywhaq (ENSCGRG00001024724) #25	ENSCGRG00001018516 #26	Grhl1 (ENSCGRG00001024970) #27	Klf11 (ENSCGRG00001018478) #28	Cys1 (ENSCGRG00001013951) #29	Rrm2 (ENSCGRG00001007841) #30	Hpcal1 (ENSCGRG00001023170) #31	ENSCGRG00001015979 #32	Nol10 (ENSCGRG00001009928) #33	Atp6v1c2 (ENSCGRG00001021615) #34	Pdia6 (ENSCGRG00001017472) #35	Kcnf1 (ENSCGRG00001014274) #36	2410004P03Rik (ENSCGRG00001003389)
Golden Hamster	MODERN SPECIES	737	Adi1 (ENSMAUG00000017657)	Rnaseh1 (ENSMAUG00000014957)	Rps7 (ENSMAUG00000012178) #8	Colec11 (ENSMAUG00000012547) #9	Allc (ENSMAUG00000015102) #10	ENSMAUG00000010849 #11	Sox11 (ENSMAUG00000016656) #13	Cmpk2 (ENSMAUG00000017501) #14	Rsad2 (ENSMAUG00000008669) #15	Rnf144a (ENSMAUG00000014880) #16	Id2 (ENSMAUG00000012468) #17	Kidins220 (ENSMAUG00000011599) #18	Mboat2 (ENSMAUG00000005505) #19	Asap2 (ENSMAUG00000001240) #20	Itgb1bp1 (ENSMAUG00000017998) #21	Cpsf3 (ENSMAUG00000000166) #22	Iah1 (ENSMAUG00000018865) #23	Adam17 (ENSMAUG00000015291) #24	ENSMAUG00000017035 ##25	Taf1b (ENSMAUG00000013477) #26	Grhl1 (ENSMAUG00000013649) #27	ENSMAUG00000016595 #30
Murinae	ANCESTRAL SPECIES	8	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B	ENSGT00940000154459.B #37	ENSGT00940000160213 #36	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a #32	ENSGT00940000154645.A #31	ENSGT01060000248676	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000156714 #18	ENSGT00940000156464 #17	ENSGT00940000157701 #16	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13
Mus	ANCESTRAL SPECIES	10	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B	ENSGT00940000154459.B #37	ENSGT00940000160213 #36	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a #32	ENSGT01060000248676	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000156714 #18	ENSGT00940000156464 #17	ENSGT00940000157701 #16	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c	ENSGT00940000154459.B #37	ENSGT00940000160213 #36	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT01060000248676	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000156714 #18	ENSGT00940000156464 #17	ENSGT00940000157701 #16	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13
Mus_B	ANCESTRAL SPECIES	17	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c	ENSGT00940000154459.B #37	ENSGT00940000160213 #36	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT00940000154645.A #31	ENSGT01060000248676	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000156714 #18	ENSGT00940000156464 #17	ENSGT00940000157701 #16	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000157219	ENSGT01100000263518.A.a.a.b	ENSGT00390000008041.C	ENSGT00940000155734	ENSGT01030000234517.D	ENSGT00940000153916.B.c	ENSGT00940000154459.B #37	ENSGT00940000160213 #36	ENSGT00940000155646 #35	ENSGT00390000004263.b #34	ENSGT00390000007900 #33	ENSGT00950000182995.e.a.a.a.e #32	ENSGT00940000154645.A #31	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.v #30	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000156714 #18	ENSGT00940000156464 #17	ENSGT00940000157701 #16	ENSGT00390000013670 #15	ENSGT00940000154030.a.b #14	ENSGT00940000161652 #13
Steppe mouse	MODERN SPECIES	2460														Asap2 (ENSMSIG00000022503) #20	Itgb1bp1 (ENSMSIG00000022470) #21	Cpsf3 (ENSMSIG00000022405) #22	Iah1 (ENSMSIG00000022381) #23	Adam17 (ENSMSIG00000022289) #24	Ywhaq (ENSMSIG00000022246) #25
spretus	MODERN SPECIES	3	Lratd1 (MGP_SPRETEiJ_G0018466)	Trib2 (MGP_SPRETEiJ_G0018467)	Lpin1 (MGP_SPRETEiJ_G0018468)	Ntsr2 (MGP_SPRETEiJ_G0018469)	Greb1 (MGP_SPRETEiJ_G0018470)	E2f6 (MGP_SPRETEiJ_G0018471)	Rock2 (MGP_SPRETEiJ_G0018472)	MGP_SPRETEiJ_G0018473	2410004P03Rik (MGP_SPRETEiJ_G0018474)	Kcnf1 (MGP_SPRETEiJ_G0018475) #36	Pdia6 (MGP_SPRETEiJ_G0018476) #35	Atp6v1c2 (MGP_SPRETEiJ_G0018477) #34	Nol10 (MGP_SPRETEiJ_G0018478) #33	Asap2 (MGP_SPRETEiJ_G0018479) #20	Itgb1bp1 (MGP_SPRETEiJ_G0018480) #21	Cpsf3 (MGP_SPRETEiJ_G0018481) #22	Iah1 (MGP_SPRETEiJ_G0018482) #23	Adam17 (MGP_SPRETEiJ_G0018483) #24	Ywhaq (MGP_SPRETEiJ_G0018484) #25	Taf1b (MGP_SPRETEiJ_G0018485) #26	MGP_SPRETEiJ_G0018486	Grhl1 (MGP_SPRETEiJ_G0018487) #27	Klf11 (MGP_SPRETEiJ_G0018488) #28	Cys1 (MGP_SPRETEiJ_G0018489) #29	Rrm2 (MGP_SPRETEiJ_G0018490) #30	Mboat2 (MGP_SPRETEiJ_G0018491) #19	Kidins220 (MGP_SPRETEiJ_G0018492) #18	MGP_SPRETEiJ_G0018493 #17	Rnf144a (MGP_SPRETEiJ_G0018494) #16	Rsad2 (MGP_SPRETEiJ_G0018495) #15	Cmpk2 (MGP_SPRETEiJ_G0018496) #14
Mouse	MODERN SPECIES	3	Greb1 (ENSMUSG00000036523)	E2f6 (ENSMUSG00000057469)	Rock2 (ENSMUSG00000020580)	Pqlc3 (ENSMUSG00000045679)	2410004P03Rik (ENSMUSG00000071398)	Kcnf1 (ENSMUSG00000051726) #36	Pdia6 (ENSMUSG00000020571) #35	Atp6v1c2 (ENSMUSG00000020566) #34	Nol10 (ENSMUSG00000061458) #33	Odc1 (ENSMUSG00000011179) #32	Hpcal1 (ENSMUSG00000071379) #31	5730507C01Rik (ENSMUSG00000073197)	Gm21863 (ENSMUSG00000095470)	Asap2 (ENSMUSG00000052632) #20	Itgb1bp1 (ENSMUSG00000062352) #21	Cpsf3 (ENSMUSG00000054309) #22	Iah1 (ENSMUSG00000062054) #23	Adam17 (ENSMUSG00000052593) #24	Ywhaq (ENSMUSG00000076432) #25	9030624G23Rik (ENSMUSG00000073158)	Taf1b (ENSMUSG00000059669) #26	Grhl1 (ENSMUSG00000020656) #27	Klf11 (ENSMUSG00000020653) #28	Cys1 (ENSMUSG00000062563) #29	Rrm2 (ENSMUSG00000020649) #30	Mboat2 (ENSMUSG00000020646) #19	Kidins220 (ENSMUSG00000036333) #18	Id2 (ENSMUSG00000020644) #17	Rnf144a (ENSMUSG00000020642) #16	Rsad2 (ENSMUSG00000020641) #15	Cmpk2 (ENSMUSG00000020638) #14
Ryukyu mouse	MODERN SPECIES	3	Trib2 (MGP_CAROLIEiJ_G0017625)	Lpin1 (MGP_CAROLIEiJ_G0017626)	Ntsr2 (MGP_CAROLIEiJ_G0017627)	Greb1 (MGP_CAROLIEiJ_G0017628)	MGP_CAROLIEiJ_G0017629	Rock2 (MGP_CAROLIEiJ_G0017630)	MGP_CAROLIEiJ_G0017631	MGP_CAROLIEiJ_G0017632 #37	Kcnf1 (MGP_CAROLIEiJ_G0017633) #36	Pdia6 (MGP_CAROLIEiJ_G0017634) #35	Atp6v1c2 (MGP_CAROLIEiJ_G0017635) #34	Nol10 (MGP_CAROLIEiJ_G0017636) #33	Odc1 (MGP_CAROLIEiJ_G0017637) #32	Asap2 (MGP_CAROLIEiJ_G0017638) #20	Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #21	Cpsf3 (MGP_CAROLIEiJ_G0017640) #22	Iah1 (MGP_CAROLIEiJ_G0017641) #23	Adam17 (MGP_CAROLIEiJ_G0017642) #24	Ywhaq (MGP_CAROLIEiJ_G0017643) #25	Taf1b (MGP_CAROLIEiJ_G0017644) #26	Grhl1 (MGP_CAROLIEiJ_G0017645) #27	Klf11 (MGP_CAROLIEiJ_G0017646) #28	Cys1 (MGP_CAROLIEiJ_G0017647) #29	Rrm2 (MGP_CAROLIEiJ_G0017648) #30	Mboat2 (MGP_CAROLIEiJ_G0017649) #19	Kidins220 (MGP_CAROLIEiJ_G0017650) #18	MGP_CAROLIEiJ_G0017651 #17	Rnf144a (MGP_CAROLIEiJ_G0017652) #16	Rsad2 (MGP_CAROLIEiJ_G0017653) #15	Cmpk2 (MGP_CAROLIEiJ_G0017654) #14	Sox11 (MGP_CAROLIEiJ_G0017655) #13
Shrew mouse	MODERN SPECIES	20	Lpin1 (MGP_PahariEiJ_G0029382)	MGP_PahariEiJ_G0029383	Greb1 (MGP_PahariEiJ_G0029384)	E2f6 (MGP_PahariEiJ_G0029385)	MGP_PahariEiJ_G0029386	Rock2 (MGP_PahariEiJ_G0029387)	Pqlc3 (MGP_PahariEiJ_G0029388)	MGP_PahariEiJ_G0029389 #37	Kcnf1 (MGP_PahariEiJ_G0029390) #36	Pdia6 (MGP_PahariEiJ_G0029391) #35	Atp6v1c2 (MGP_PahariEiJ_G0029392) #34	Nol10 (MGP_PahariEiJ_G0029393) #33	Odc1 (MGP_PahariEiJ_G0029394) #32	Asap2 (MGP_PahariEiJ_G0029395) #20	Itgb1bp1 (MGP_PahariEiJ_G0029396) #21	Cpsf3 (MGP_PahariEiJ_G0029397) #22	Iah1 (MGP_PahariEiJ_G0029398) #23	Adam17 (MGP_PahariEiJ_G0029399) #24	MGP_PahariEiJ_G0029400 #25	MGP_PahariEiJ_G0029401 #26	MGP_PahariEiJ_G0029402 #27	Klf11 (MGP_PahariEiJ_G0029403) #28	Cys1 (MGP_PahariEiJ_G0029404) #29	MGP_PahariEiJ_G0029405 #30	Mboat2 (MGP_PahariEiJ_G0029407) #19	Kidins220 (MGP_PahariEiJ_G0029408) #18	MGP_PahariEiJ_G0029409 #17	Rnf144a (MGP_PahariEiJ_G0029410) #16	Rsad2 (MGP_PahariEiJ_G0029411) #15	Cmpk2 (MGP_PahariEiJ_G0029412) #14	Sox11 (MGP_PahariEiJ_G0029413) #13
Rat	MODERN SPECIES	16	Greb1 (ENSRNOG00000024651)	E2f6 (ENSRNOG00000004449)	Rock2 (ENSRNOG00000004496)	Slc66a3 (ENSRNOG00000005126)	C6h2orf50 (ENSRNOG00000024338) #37	Kcnf1 (ENSRNOG00000024310) #36	Pdia6 (ENSRNOG00000050197) #35	Atp6v1c2 (ENSRNOG00000050553) #34	Nol10 (ENSRNOG00000005344) #33	AABR07063703.1 (ENSRNOG00000046279)	Odc1 (ENSRNOG00000005424) #32	LOC120093238 (ENSRNOG00000032523)	Hpcal1 (ENSRNOG00000005492) #31	Asap2 (ENSRNOG00000061519) #20	Itgb1bp1 (ENSRNOG00000059402) #21	Cpsf3 (ENSRNOG00000052418) #22	Iah1 (ENSRNOG00000060853) #23	Adam17 (ENSRNOG00000060694) #24	Ywhaq (ENSRNOG00000051650) #25	Taf1b (ENSRNOG00000061415) #26	Rbm34-ps1 (ENSRNOG00000065550)	Grhl1 (ENSRNOG00000054989) #27	Klf11 (ENSRNOG00000054259) #28	Cys1 (ENSRNOG00000058891) #29	Rrm2 (ENSRNOG00000054286) #30	Mboat2 (ENSRNOG00000061050) #19	Kidins220 (ENSRNOG00000023176) #18	LOC120093241 (ENSRNOG00000062523)	Id2 (ENSRNOG00000007237) #17	Rnf144a (ENSRNOG00000007370) #16	Rsad2 (ENSRNOG00000007539) #15
Lagomorpha	ANCESTRAL SPECIES	233												ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01090000260040.b.b.b.b.a.b ##25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28
Rabbit	MODERN SPECIES	536									KIDINS220 (ENSOCUG00000003996) #18	MBOAT2 (ENSOCUG00000016985) #19	ASAP2 (ENSOCUG00000003719) #20	ENSOCUG00000003726 #21	IAH1 (ENSOCUG00000026669) #23	ADAM17 (ENSOCUG00000010474) #24	YWHAQ (ENSOCUG00000010482) #25	CPSF3 (ENSOCUG00000003728) #22	ENSOCUG00000028159	TAF1B (ENSOCUG00000005643) #26	GRHL1 (ENSOCUG00000017717) #27	KLF11 (ENSOCUG00000003809) #28
Pika	MODERN SPECIES	2207														ENSOPRG00000008852 #20	ITGB1BP1 (ENSOPRG00000008887) #21	CPSF3 (ENSOPRG00000008902) #22	IAH1 (ENSOPRG00000008947) #23	ADAM17 (ENSOPRG00000008960) #24	ENSOPRG00000008991 ##25	TAF1B (ENSOPRG00000008998) #26	ENSOPRG00000009027 #27
Tree shrew	MODERN SPECIES	2529														ENSTBEG00000008035 #20	ITGB1BP1 (ENSTBEG00000001622) #21	CPSF3 (ENSTBEG00000002707) #22	ADAM17 (ENSTBEG00000004343) #24	ENSTBEG00000006122 ##25	TAF1B (ENSTBEG00000006430) #26	GRHL1 (ENSTBEG00000007777) #27	KLF11 (ENSTBEG00000008268) #28
Primates	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Hominidae	ANCESTRAL SPECIES	19	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464.o #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464.o #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Pan	ANCESTRAL SPECIES	17	ENSGT00390000003466.g	ENSGT00390000014122.i.b.a.b.x #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464.o #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Chimpanzee	MODERN SPECIES	14	RNASEH1 (ENSPTRG00000011614)	RPS7 (ENSPTRG00000011615) #8	COLEC11 (ENSPTRG00000011616) #9	ALLC (ENSPTRG00000011618) #10	DCDC2C (ENSPTRG00000033961) #11	SOX11 (ENSPTRG00000045174) #13	CMPK2 (ENSPTRG00000011627) #14	RSAD2 (ENSPTRG00000011629) #15	RNF144A (ENSPTRG00000011630) #16	ID2 (ENSPTRG00000011632) #17	KIDINS220 (ENSPTRG00000011633) #18	MBOAT2 (ENSPTRG00000011634) #19	ASAP2 (ENSPTRG00000011636) #20	ENSPTRG00000043418	ITGB1BP1 (ENSPTRG00000011637) #21	CPSF3 (ENSPTRG00000011638) #22	IAH1 (ENSPTRG00000011639) #23	ADAM17 (ENSPTRG00000011640) #24	YWHAQ (ENSPTRG00000011641) #25	TAF1B (ENSPTRG00000011642) #26	GRHL1 (ENSPTRG00000011643) #27	KLF11 (ENSPTRG00000011645) #28	ENSPTRG00000046195	CYS1 (ENSPTRG00000030565) #29	RRM2 (ENSPTRG00000042985) #30	HPCAL1 (ENSPTRG00000011649) #31	ODC1 (ENSPTRG00000011650) #32	NOL10 (ENSPTRG00000011651) #33	ATP6V1C2 (ENSPTRG00000011652) #34	PDIA6 (ENSPTRG00000011653) #35	KCNF1 (ENSPTRG00000030563) #36
Bonobo	MODERN SPECIES	14	RPS7 (ENSPPAG00000039898) #8	COLEC11 (ENSPPAG00000038334) #9	ALLC (ENSPPAG00000043709) #10	DCDC2C (ENSPPAG00000035755) #11	ENSPPAG00000031455	ENSPPAG00000036968	ENSPPAG00000037362	RSAD2 (ENSPPAG00000039493) #15	RNF144A (ENSPPAG00000037389) #16	ID2 (ENSPPAG00000034410) #17	KIDINS220 (ENSPPAG00000041858) #18	MBOAT2 (ENSPPAG00000043445) #19	ENSPPAG00000043888	ASAP2 (ENSPPAG00000008883) #20	ITGB1BP1 (ENSPPAG00000039328) #21	CPSF3 (ENSPPAG00000042457) #22	IAH1 (ENSPPAG00000033783) #23	ADAM17 (ENSPPAG00000038185) #24	ENSPPAG00000043019 ##25	TAF1B (ENSPPAG00000031684) #26	GRHL1 (ENSPPAG00000030977) #27	KLF11 (ENSPPAG00000030099) #28	ENSPPAG00000010181	RRM2 (ENSPPAG00000040070) #30	HPCAL1 (ENSPPAG00000032513) #31	ODC1 (ENSPPAG00000004476) #32	NOL10 (ENSPPAG00000010631) #33	ATP6V1C2 (ENSPPAG00000028894) #34	PDIA6 (ENSPPAG00000028754) #35	KCNF1 (ENSPPAG00000042656) #36	C2orf50 (ENSPPAG00000042216) #37
Human	MODERN SPECIES	11	ADI1 (ENSG00000182551)	RNASEH1 (ENSG00000171865)	RPS7 (ENSG00000171863) #8	COLEC11 (ENSG00000118004) #9	ALLC (ENSG00000151360) #10	DCDC2C (ENSG00000214866) #11	SOX11 (ENSG00000176887) #13	CMPK2 (ENSG00000134326) #14	RSAD2 (ENSG00000134321) #15	RNF144A (ENSG00000151692) #16	ID2 (ENSG00000115738) #17	KIDINS220 (ENSG00000134313) #18	MBOAT2 (ENSG00000143797) #19	ASAP2 (ENSG00000151693) #20	ITGB1BP1 (ENSG00000119185) #21	CPSF3 (ENSG00000119203) #22	IAH1 (ENSG00000134330) #23	ADAM17 (ENSG00000151694) #24	YWHAQ (ENSG00000134308) #25	TAF1B (ENSG00000115750) #26	GRHL1 (ENSG00000134317) #27	KLF11 (ENSG00000172059) #28	CYS1 (ENSG00000205795) #29	RRM2 (ENSG00000171848) #30	HPCAL1 (ENSG00000115756) #31	ODC1 (ENSG00000115758) #32	NOL10 (ENSG00000115761) #33	ATP6V1C2 (ENSG00000143882) #34	PDIA6 (ENSG00000143870) #35	KCNF1 (ENSG00000162975) #36	C2orf50 (ENSG00000150873) #37
Gorilla	MODERN SPECIES	14	RPS7 (ENSGGOG00000023095) #8	COLEC11 (ENSGGOG00000009819) #9	ALLC (ENSGGOG00000009821) #10	DCDC2C (ENSGGOG00000034923) #11	SOX11 (ENSGGOG00000037622) #13	ENSGGOG00000004066	ENSGGOG00000036393	RSAD2 (ENSGGOG00000010720) #15	RNF144A (ENSGGOG00000039753) #16	ENSGGOG00000042490	ENSGGOG00000042851	KIDINS220 (ENSGGOG00000009822) #18	MBOAT2 (ENSGGOG00000040459) #19	ASAP2 (ENSGGOG00000001744) #20	ITGB1BP1 (ENSGGOG00000001754) #21	CPSF3 (ENSGGOG00000001757) #22	IAH1 (ENSGGOG00000001760) #23	ENSGGOG00000039328	ADAM17 (ENSGGOG00000013128) #24	ENSGGOG00000001569 #25	TAF1B (ENSGGOG00000002685) #26	GRHL1 (ENSGGOG00000002692) #27	KLF11 (ENSGGOG00000012494) #28	ENSGGOG00000027524	RRM2 (ENSGGOG00000040108) #30	HPCAL1 (ENSGGOG00000007141) #31	ODC1 (ENSGGOG00000007991) #32	NOL10 (ENSGGOG00000034826) #33	ATP6V1C2 (ENSGGOG00000002273) #34	PDIA6 (ENSGGOG00000002278) #35	KCNF1 (ENSGGOG00000009528) #36
Orangutan	MODERN SPECIES	14	RPS7 (ENSPPYG00000025872) #8	COLEC11 (ENSPPYG00000012682) #9	ALLC (ENSPPYG00000012681) #10	ENSPPYG00000012680 #11	SOX11 (ENSPPYG00000036338) #13	CMPK2 (ENSPPYG00000012675) #14	RSAD2 (ENSPPYG00000012674) #15	RNF144A (ENSPPYG00000012673) #16	ENSPPYG00000030180	ID2 (ENSPPYG00000012719) #17	KIDINS220 (ENSPPYG00000012670) #18	MBOAT2 (ENSPPYG00000012669) #19	ENSPPYG00000037864	ASAP2 (ENSPPYG00000012668) #20	ITGB1BP1 (ENSPPYG00000031588) #21	CPSF3 (ENSPPYG00000012666) #22	IAH1 (ENSPPYG00000012665) #23	ADAM17 (ENSPPYG00000012664) #24	YWHAQ (ENSPPYG00000012663) #25	TAF1B (ENSPPYG00000012662) #26	GRHL1 (ENSPPYG00000012661) #27	KLF11 (ENSPPYG00000012659) #28	CYS1 (ENSPPYG00000012657) #29	RRM2 (ENSPPYG00000012656) #30	HPCAL1 (ENSPPYG00000012655) #31	ODC1 (ENSPPYG00000012654) #32	NOL10 (ENSPPYG00000012653) #33	ATP6V1C2 (ENSPPYG00000012652) #34	PDIA6 (ENSPPYG00000012651) #35	KCNF1 (ENSPPYG00000041457) #36	C2orf50 (ENSPPYG00000012710) #37
Gibbon	MODERN SPECIES	9	RNASEH1 (ENSNLEG00000015400)	RPS7 (ENSNLEG00000034280) #8	ENSNLEG00000031083 #9	ALLC (ENSNLEG00000015418) #10	DCDC2C (ENSNLEG00000015424) #11	ENSNLEG00000031381 #14	RSAD2 (ENSNLEG00000015429) #15	RNF144A (ENSNLEG00000015431) #16	ENSNLEG00000035496	ID2 (ENSNLEG00000013192) #17	KIDINS220 (ENSNLEG00000013206) #18	MBOAT2 (ENSNLEG00000013229) #19	ASAP2 (ENSNLEG00000013248) #20	ENSNLEG00000032390	ITGB1BP1 (ENSNLEG00000013322) #21	CPSF3 (ENSNLEG00000013359) #22	IAH1 (ENSNLEG00000013435) #23	ADAM17 (ENSNLEG00000013455) #24	ENSNLEG00000034153	YWHAQ (ENSNLEG00000013534) #25	TAF1B (ENSNLEG00000013577) #26	GRHL1 (ENSNLEG00000013634) #27	KLF11 (ENSNLEG00000013701) #28	ENSNLEG00000031300	ENSNLEG00000031728 #29	RRM2 (ENSNLEG00000035605) #30	HPCAL1 (ENSNLEG00000013802) #31	ODC1 (ENSNLEG00000013820) #32	NOL10 (ENSNLEG00000013851) #33	ATP6V1C2 (ENSNLEG00000013902) #34	PDIA6 (ENSNLEG00000013916) #35
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000159468 #9	ENSGT00390000014122.i.b.a.a.b ##8	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526
Pig-tailed macaque	MODERN SPECIES	127					SOX11 (ENSMNEG00000008816) #13	ENSMNEG00000032217	CMPK2 (ENSMNEG00000018646) #14	RSAD2 (ENSMNEG00000040478) #15	RNF144A (ENSMNEG00000030505) #16	ID2 (ENSMNEG00000039277) #17	KIDINS220 (ENSMNEG00000044570) #18	MBOAT2 (ENSMNEG00000036853) #19	ENSMNEG00000042727	ASAP2 (ENSMNEG00000020414) #20	ITGB1BP1 (ENSMNEG00000043390) #21	CPSF3 (ENSMNEG00000039447) #22	IAH1 (ENSMNEG00000038428) #23	ENSMNEG00000039629	ADAM17 (ENSMNEG00000031025) #24	YWHAQ (ENSMNEG00000035884) #25	TAF1B (ENSMNEG00000007382) #26	GRHL1 (ENSMNEG00000030598) #27	KLF11 (ENSMNEG00000034723) #28	ENSMNEG00000018854	CYS1 (ENSMNEG00000030186) #29	RRM2 (ENSMNEG00000028272) #30	HPCAL1 (ENSMNEG00000033423) #31	ODC1 (ENSMNEG00000043400) #32	NOL10 (ENSMNEG00000039685) #33	ENSMNEG00000038801	ATP6V1C2 (ENSMNEG00000037515) #34
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000003466.e	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000170471.A.b.b.a.b.b	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a	ENSGT00940000154030.a.b #14	ENSGT00910000148182	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Crab-eating macaque	MODERN SPECIES	4	DCDC2C (ENSMFAG00000042487) #11	ENSMFAG00000061013	ENSMFAG00000057748	ENSMFAG00000049271	ENSMFAG00000060203	ENSMFAG00000048573	ENSMFAG00000049943	RSAD2 (ENSMFAG00000055130) #15	RNF144A (ENSMFAG00000040034) #16	ENSMFAG00000057704	ID2 (ENSMFAG00000000039) #17	KIDINS220 (ENSMFAG00000031830) #18	MBOAT2 (ENSMFAG00000003741) #19	ASAP2 (ENSMFAG00000037845) #20	ITGB1BP1 (ENSMFAG00000045554) #21	CPSF3 (ENSMFAG00000001339) #22	IAH1 (ENSMFAG00000039055) #23	ADAM17 (ENSMFAG00000039177) #24	ENSMFAG00000004741 ##25	TAF1B (ENSMFAG00000041401) #26	GRHL1 (ENSMFAG00000032356) #27	KLF11 (ENSMFAG00000039490) #28	ENSMFAG00000052007	RRM2 (ENSMFAG00000040783) #30	HPCAL1 (ENSMFAG00000044146) #31	ENSMFAG00000038147 #32	NOL10 (ENSMFAG00000041289) #33	ATP6V1C2 (ENSMFAG00000032936) #34	PDIA6 (ENSMFAG00000037618) #35	KCNF1 (ENSMFAG00000041973) #36	C2orf50 (ENSMFAG00000032471) #37
Rhesus	MODERN SPECIES	4	ALLC (ENSMMUG00000004632) #10	DCDC2C (ENSMMUG00000023273) #11	ENSMMUG00000052757	ENSMMUG00000061676	SOX11 (ENSMMUG00000038367) #13	ENSMMUG00000058497	CMPK2 (ENSMMUG00000015968) #14	ENSMMUG00000050777	RSAD2 (ENSMMUG00000015969) #15	RNF144A (ENSMMUG00000045908) #16	ID2 (ENSMMUG00000003237) #17	KIDINS220 (ENSMMUG00000021036) #18	MBOAT2 (ENSMMUG00000021037) #19	ASAP2 (ENSMMUG00000018033) #20	ITGB1BP1 (ENSMMUG00000018036)	CPSF3 (ENSMMUG00000018038) #22	IAH1 (ENSMMUG00000018045) #23	ADAM17 (ENSMMUG00000012921) #24	ENSMMUG00000062403	YWHAQ (ENSMMUG00000006965) #25	TAF1B (ENSMMUG00000001530) #26	GRHL1 (ENSMMUG00000001535) #27	KLF11 (ENSMMUG00000002054) #28	CYS1 (ENSMMUG00000030941) #29	RRM2 (ENSMMUG00000002057) #30	ENSMMUG00000053871	HPCAL1 (ENSMMUG00000020440) #31	ODC1 (ENSMMUG00000020441) #32	NOL10 (ENSMMUG00000010671) #33	ATP6V1C2 (ENSMMUG00000010320) #34	PDIA6 (ENSMMUG00000012864) #35
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526
Olive baboon	MODERN SPECIES	5	RNASEH1 (ENSPANG00000000443)	ENSPANG00000011092 ##8	COLEC11 (ENSPANG00000011091) #9	ALLC (ENSPANG00000017775) #10	DCDC2C (ENSPANG00000007153) #11	SOX11 (ENSPANG00000041661) #13	ENSPANG00000051199	CMPK2 (ENSPANG00000026237) #14	RSAD2 (ENSPANG00000026240) #15	RNF144A (ENSPANG00000023570) #16	ID2 (ENSPANG00000039736) #17	KIDINS220 (ENSPANG00000021602) #18	MBOAT2 (ENSPANG00000022343) #19	ASAP2 (ENSPANG00000023973) #20	ITGB1BP1 (ENSPANG00000016797) #21	CPSF3 (ENSPANG00000016798) #22	IAH1 (ENSPANG00000009398) #23	ADAM17 (ENSPANG00000000727) #24	YWHAQ (ENSPANG00000037411) #25	TAF1B (ENSPANG00000013803) #26	GRHL1 (ENSPANG00000020814) #27	ENSPANG00000031829	CYS1 (ENSPANG00000005251) #29	RRM2 (ENSPANG00000018767) #30	ENSPANG00000044848	HPCAL1 (ENSPANG00000042769) #31	ENSPANG00000011223 #32	NOL10 (ENSPANG00000006259) #33	ATP6V1C2 (ENSPANG00000017189) #34	PDIA6 (ENSPANG00000006258) #35	KCNF1 (ENSPANG00000015920) #36
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00910000146975	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00860000136202	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.x #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34	ENSGT00940000155646 #35
Sooty mangabey	MODERN SPECIES	121	RPS7 (ENSCATG00000029336) #8	COLEC11 (ENSCATG00000029509) #9	ALLC (ENSCATG00000030695) #10	DCDC2C (ENSCATG00000025057) #11	SOX11 (ENSCATG00000020144) #13	ENSCATG00000018474	CMPK2 (ENSCATG00000040689) #14	RSAD2 (ENSCATG00000030147) #15	RNF144A (ENSCATG00000033975) #16	ID2 (ENSCATG00000030248) #17	KIDINS220 (ENSCATG00000041275) #18	MBOAT2 (ENSCATG00000040596) #19	ENSCATG00000011380	ASAP2 (ENSCATG00000035990) #20	ITGB1BP1 (ENSCATG00000036040) #21	CPSF3 (ENSCATG00000014770) #22	IAH1 (ENSCATG00000029613) #23	ADAM17 (ENSCATG00000037482) #24	ENSCATG00000023335 #25	TAF1B (ENSCATG00000039789) #26	GRHL1 (ENSCATG00000027324) #27	KLF11 (ENSCATG00000037396) #28	ENSCATG00000033874	CYS1 (ENSCATG00000014723) #29	ENSCATG00000031151 #30
Drill	MODERN SPECIES	1452										ID2 (ENSMLEG00000040695) #17	KIDINS220 (ENSMLEG00000035601) #18	MBOAT2 (ENSMLEG00000037301) #19	ENSMLEG00000040215	ASAP2 (ENSMLEG00000033183) #20	ITGB1BP1 (ENSMLEG00000031967) #21	CPSF3 (ENSMLEG00000026825) #22	IAH1 (ENSMLEG00000044290) #23	ADAM17 (ENSMLEG00000042175) #24	YWHAQ (ENSMLEG00000030005) #25	TAF1B (ENSMLEG00000043999) #26	GRHL1 (ENSMLEG00000036453) #27	KLF11 (ENSMLEG00000036570) #28	ENSMLEG00000042927	ENSMLEG00000035635 #30	HPCAL1 (ENSMLEG00000039247) #31	ODC1 (ENSMLEG00000039068) #32	NOL10 (ENSMLEG00000011854) #33	ENSMLEG00000033772	ATP6V1C2 (ENSMLEG00000028199) #34	PDIA6 (ENSMLEG00000033930) #35	C2orf50 (ENSMLEG00000038536) #37
Vervet Monkey	MODERN SPECIES	5	RNASEH1 (ENSCSAG00000006943)	RPS7 (ENSCSAG00000006946) #8	COLEC11 (ENSCSAG00000006951) #9	ALLC (ENSCSAG00000006987) #10	DCDC2C (ENSCSAG00000007016) #11	SOX11 (ENSCSAG00000000373) #13	ENSCSAG00000007025	CMPK2 (ENSCSAG00000007040) #14	RSAD2 (ENSCSAG00000007051) #15	RNF144A (ENSCSAG00000007058) #16	ID2 (ENSCSAG00000007060) #17	KIDINS220 (ENSCSAG00000007084) #18	MBOAT2 (ENSCSAG00000007093) #19	ASAP2 (ENSCSAG00000007108) #20	ITGB1BP1 (ENSCSAG00000007115) #21	CPSF3 (ENSCSAG00000007125) #22	IAH1 (ENSCSAG00000007130) #23	ADAM17 (ENSCSAG00000007138) #24	ENSCSAG00000007145 ##25	TAF1B (ENSCSAG00000007150) #26	GRHL1 (ENSCSAG00000007158) #27	KLF11 (ENSCSAG00000007163) #28	CYS1 (ENSCSAG00000007167) #29	ENSCSAG00000007172	RRM2 (ENSCSAG00000007201) #30	HPCAL1 (ENSCSAG00000007213) #31	ENSCSAG00000007220 #32	NOL10 (ENSCSAG00000007229) #33	ATP6V1C2 (ENSCSAG00000007259) #34	PDIA6 (ENSCSAG00000007282) #35	KCNF1 (ENSCSAG00000000374) #36
Rhinopithecus	ANCESTRAL SPECIES	174										ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00910000147368	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a.w.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.bb.a #32	ENSGT00390000007900 #33	ENSGT00910000147526	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Golden snub-nosed monkey	MODERN SPECIES	2175									ID2 (ENSRROG00000004887) #17	KIDINS220 (ENSRROG00000036660) #18	MBOAT2 (ENSRROG00000045314) #19	ENSRROG00000033889	ENSRROG00000035274	ASAP2 (ENSRROG00000042260) #20	ENSRROG00000044107 #21	CPSF3 (ENSRROG00000033792) #22	IAH1 (ENSRROG00000034099) #23	ENSRROG00000036140	ADAM17 (ENSRROG00000038460) #24	ENSRROG00000025134	YWHAQ (ENSRROG00000044691) #25	TAF1B (ENSRROG00000024712) #26	GRHL1 (ENSRROG00000028348) #27	KLF11 (ENSRROG00000041608) #28	RRM2 (ENSRROG00000041328) #30	HPCAL1 (ENSRROG00000033182) #31	ENSRROG00000045795 #32	NOL10 (ENSRROG00000043208) #33	ENSRROG00000029320	ATP6V1C2 (ENSRROG00000039206) #34	PDIA6 (ENSRROG00000040359) #35
Black snub-nosed monkey	MODERN SPECIES	147										ID2 (ENSRBIG00000044689) #17	KIDINS220 (ENSRBIG00000035069) #18	MBOAT2 (ENSRBIG00000035711) #19	ASAP2 (ENSRBIG00000035134) #20	ENSRBIG00000034346	ENSRBIG00000039204 #21	CPSF3 (ENSRBIG00000041615) #22	IAH1 (ENSRBIG00000029112) #23	ADAM17 (ENSRBIG00000031143) #24	ENSRBIG00000023329	YWHAQ (ENSRBIG00000023381) #25	TAF1B (ENSRBIG00000028101) #26	GRHL1 (ENSRBIG00000024539) #27	KLF11 (ENSRBIG00000037952) #28	RRM2 (ENSRBIG00000033258) #30	HPCAL1 (ENSRBIG00000034017) #31	ENSRBIG00000000544 #32	NOL10 (ENSRBIG00000043507) #33	ATP6V1C2 (ENSRBIG00000031961) #34	ENSRBIG00000035043	PDIA6 (ENSRBIG00000031454) #35	KCNF1 (ENSRBIG00000044334) #36
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.y.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Cebidae	ANCESTRAL SPECIES	40	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.y.a.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000015789.c.b	ENSGT00940000155623 #20	ENSGT00390000003990.c #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.b.b ##25	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a.y.a.b #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36
Capuchin	MODERN SPECIES	1											ID2 (ENSCCAG00000034943) #17	KIDINS220 (ENSCCAG00000035619) #18	MBOAT2 (ENSCCAG00000028053) #19	ASAP2 (ENSCCAG00000033861) #20	ITGB1BP1 (ENSCCAG00000036127) #21	CPSF3 (ENSCCAG00000036730) #22	ENSCCAG00000010701	IAH1 (ENSCCAG00000034153) #23	ADAM17 (ENSCCAG00000035481) #24	ENSCCAG00000001935	YWHAQ (ENSCCAG00000031746) #25	TAF1B (ENSCCAG00000031135) #26	GRHL1 (ENSCCAG00000022259) #27	KLF11 (ENSCCAG00000026312) #28	CYS1 (ENSCCAG00000028829) #29	ENSCCAG00000009364 #30	HPCAL1 (ENSCCAG00000020323) #31	ODC1 (ENSCCAG00000021928) #32	NOL10 (ENSCCAG00000027373) #33	ATP6V1C2 (ENSCCAG00000034767) #34	PDIA6 (ENSCCAG00000028275) #35
Bolivian squirrel monkey	MODERN SPECIES	63						ENSSBOG00000029283	ENSSBOG00000028588 #14	RSAD2 (ENSSBOG00000024280) #15	RNF144A (ENSSBOG00000019246) #16	ID2 (ENSSBOG00000033610) #17	KIDINS220 (ENSSBOG00000026153) #18	MBOAT2 (ENSSBOG00000034820) #19	ENSSBOG00000029937	ASAP2 (ENSSBOG00000021237) #20	ENSSBOG00000031545 #21	CPSF3 (ENSSBOG00000027263) #22	IAH1 (ENSSBOG00000019617) #23	ADAM17 (ENSSBOG00000035331) #24	ENSSBOG00000033831 ##25	TAF1B (ENSSBOG00000028943) #26	GRHL1 (ENSSBOG00000011486) #27	KLF11 (ENSSBOG00000018899) #28	ENSSBOG00000022360 #30	HPCAL1 (ENSSBOG00000026513) #31	ODC1 (ENSSBOG00000034688) #32	NOL10 (ENSSBOG00000025651) #33	ATP6V1C2 (ENSSBOG00000020727) #34	PDIA6 (ENSSBOG00000016573) #35	KCNF1 (ENSSBOG00000032364) #36	C2orf50 (ENSSBOG00000027050) #37	SLC66A3 (ENSSBOG00000021893)
Marmoset	MODERN SPECIES	5	ENSCJAG00000016462 #8	COLEC11 (ENSCJAG00000016457) #9	ENSCJAG00000065738	ENSCJAG00000078912	DCDC2C (ENSCJAG00000083758) #11	SOX11 (ENSCJAG00000038240) #13	CMPK2 (ENSCJAG00000085281) #14	RSAD2 (ENSCJAG00000010219) #15	RNF144A (ENSCJAG00000010225) #16	ENSCJAG00000006037 #17	KIDINS220 (ENSCJAG00000006054) #18	ENSCJAG00000053616	MBOAT2 (ENSCJAG00000006207) #19	ASAP2 (ENSCJAG00000006233) #20	ENSCJAG00000006250 #21	CPSF3 (ENSCJAG00000006276) #22	IAH1 (ENSCJAG00000006360) #23	ADAM17 (ENSCJAG00000006369) #24	ENSCJAG00000062528	YWHAQ (ENSCJAG00000040849) ##25	TAF1B (ENSCJAG00000006420) #26	GRHL1 (ENSCJAG00000006431) #27	KLF11 (ENSCJAG00000046813) #28	ENSCJAG00000006533 #30	HPCAL1 (ENSCJAG00000041528) #31	ODC1 (ENSCJAG00000006576) #32	NOL10 (ENSCJAG00000006602) #33	ATP6V1C2 (ENSCJAG00000006660) #34	PDIA6 (ENSCJAG00000006694) #35	KCNF1 (ENSCJAG00000022930) #36	C2orf50 (ENSCJAG00000079383) #37
Mas night monkey	MODERN SPECIES	1339										ID2 (ENSANAG00000035588) #17	KIDINS220 (ENSANAG00000038069) #18	MBOAT2 (ENSANAG00000037506) #19	ENSANAG00000030828	ASAP2 (ENSANAG00000023907) #20	ENSANAG00000034926 #21	CPSF3 (ENSANAG00000031254) #22	IAH1 (ENSANAG00000033141) #23	ENSANAG00000022015	ADAM17 (ENSANAG00000037496) #24	YWHAQ (ENSANAG00000026145) ##25	TAF1B (ENSANAG00000031526) #26	GRHL1 (ENSANAG00000025191) #27	KLF11 (ENSANAG00000028728) #28	ENSANAG00000025761 #30	HPCAL1 (ENSANAG00000033383) #31	ODC1 (ENSANAG00000036668) #32	NOL10 (ENSANAG00000024937) #33	ENSANAG00000027269 #34	PDIA6 (ENSANAG00000012637) #35	KCNF1 (ENSANAG00000036777) #36	C2orf50 (ENSANAG00000036655) #37
Tarsier	MODERN SPECIES	6758													ENSTSYG00000028357	ASAP2 (ENSTSYG00000014529) #20	ITGB1BP1 (ENSTSYG00000014537) #21	CPSF3 (ENSTSYG00000002967) #22	IAH1 (ENSTSYG00000026191) #23	ADAM17 (ENSTSYG00000008904) #24	YWHAQ (ENSTSYG00000031132) #25
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Bushbaby	MODERN SPECIES	137									ID2 (ENSOGAG00000012565) #17	KIDINS220 (ENSOGAG00000012566) #18	MBOAT2 (ENSOGAG00000034475) #19	ENSOGAG00000034565	ENSOGAG00000034773	ASAP2 (ENSOGAG00000001677) #20	ITGB1BP1 (ENSOGAG00000001679) #21	CPSF3 (ENSOGAG00000001680) #22	IAH1 (ENSOGAG00000000544) #23	ADAM17 (ENSOGAG00000000546) #24	YWHAQ (ENSOGAG00000000547) #25	TAF1B (ENSOGAG00000014337) #26	GRHL1 (ENSOGAG00000014342) #27	KLF11 (ENSOGAG00000026035) #28	ENSOGAG00000028490	RRM2 (ENSOGAG00000007075) #30	HPCAL1 (ENSOGAG00000001557) #31	ENSOGAG00000001558 #32	ENSOGAG00000033625	NOL10 (ENSOGAG00000010494) #33	ATP6V1C2 (ENSOGAG00000009748) #34	PDIA6 (ENSOGAG00000009751) #35	ENSOGAG00000033741
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.e.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Mouse lemur	MODERN SPECIES	30	COLEC11 (ENSMICG00000037566) #9	ALLC (ENSMICG00000016182) #10	DCDC2C (ENSMICG00000044531) #11	ENSMICG00000032327	ENSMICG00000041516	SOX11 (ENSMICG00000026777) #13	ENSMICG00000038260	CMPK2 (ENSMICG00000035731) #14	RSAD2 (ENSMICG00000000161) #15	RNF144A (ENSMICG00000006187) #16	ID2 (ENSMICG00000033026) #17	KIDINS220 (ENSMICG00000010065) #18	MBOAT2 (ENSMICG00000010098) #19	ASAP2 (ENSMICG00000002345) #20	ITGB1BP1 (ENSMICG00000002359) #21	CPSF3 (ENSMICG00000002363) #22	IAH1 (ENSMICG00000002377) #23	ADAM17 (ENSMICG00000002380) #24	YWHAQ (ENSMICG00000000973) #25	ENSMICG00000045104 #37	SLC66A3 (ENSMICG00000043387)	TAF1B (ENSMICG00000012714) #26	GRHL1 (ENSMICG00000012737) #27	KLF11 (ENSMICG00000012761) #28	CYS1 (ENSMICG00000027772) #29	ENSMICG00000012789 #30	HPCAL1 (ENSMICG00000029256) #31	ENSMICG00000012511 #32	NOL10 (ENSMICG00000004805) #33	ATP6V1C2 (ENSMICG00000017366) #34	ENSMICG00000017368 #35
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT00940000173435	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.e.a #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Coquerels sifaka	MODERN SPECIES	178						SOX11 (ENSPCOG00000027861) #13	CMPK2 (ENSPCOG00000026777) #14	RSAD2 (ENSPCOG00000009941) #15	RNF144A (ENSPCOG00000022449) #16	ID2 (ENSPCOG00000027288) #17	KIDINS220 (ENSPCOG00000004733) #18	ENSPCOG00000021299	MBOAT2 (ENSPCOG00000009724) #19	ASAP2 (ENSPCOG00000019755) #20	ENSPCOG00000023364 #21	CPSF3 (ENSPCOG00000023016) #22	IAH1 (ENSPCOG00000023355) #23	ADAM17 (ENSPCOG00000027775) #24	ENSPCOG00000023761	YWHAQ (ENSPCOG00000027184) #25
Greater bamboo lemur	MODERN SPECIES	430					ALLC (ENSPSMG00000020625) #10	DCDC2C (ENSPSMG00000020594) #11	SOX11 (ENSPSMG00000020583) #13	CMPK2 (ENSPSMG00000020579) #14	RNF144A (ENSPSMG00000020570) #16	ENSPSMG00000020553	ID2 (ENSPSMG00000020546) #17	KIDINS220 (ENSPSMG00000020495) #18	MBOAT2 (ENSPSMG00000020319) #19	ASAP2 (ENSPSMG00000020266) #20	ENSPSMG00000020223 #21	CPSF3 (ENSPSMG00000020174) #22	IAH1 (ENSPSMG00000020104) #23	ADAM17 (ENSPSMG00000020083) #24	YWHAQ (ENSPSMG00000020036) #25	TAF1B (ENSPSMG00000019984) #26	GRHL1 (ENSPSMG00000019897) #27	KLF11 (ENSPSMG00000019846) #28	CYS1 (ENSPSMG00000019836) #29	RRM2 (ENSPSMG00000019823) #30	HPCAL1 (ENSPSMG00000019803) #31	ODC1 (ENSPSMG00000019773) #32	ENSPSMG00000019736	ENSPSMG00000019726
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Eulipotyphla	ANCESTRAL SPECIES	387																ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24
Hedgehog	MODERN SPECIES	4693														ASAP2 (ENSEEUG00000015225) #20	ITGB1BP1 (ENSEEUG00000015370) #21	CPSF3 (ENSEEUG00000015422) #22
Common shrew	MODERN SPECIES	3631																CPSF3 (ENSSARG00000005186) #22	IAH1 (ENSSARG00000005263) #23	ENSSARG00000005278 #24
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Suina	ANCESTRAL SPECIES	13	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Chacoan peccary	MODERN SPECIES	775	TRAPPC12 (ENSCWAG00000009065)	ADI1 (ENSCWAG00000009097)	RNASEH1 (ENSCWAG00000009165)	RPS7 (ENSCWAG00000009286) #8	COLEC11 (ENSCWAG00000009361) #9	DCDC2C (ENSCWAG00000009777) #11	SOX11 (ENSCWAG00000009865) #13	CMPK2 (ENSCWAG00000009912) #14	RSAD2 (ENSCWAG00000009959) #15	RNF144A (ENSCWAG00000010020) #16	ID2 (ENSCWAG00000010057) #17	KIDINS220 (ENSCWAG00000010112) #18	MBOAT2 (ENSCWAG00000010541) #19	ASAP2 (ENSCWAG00000010606) #20	ITGB1BP1 (ENSCWAG00000010974) #21	CPSF3 (ENSCWAG00000011057) #22	IAH1 (ENSCWAG00000011129) #23	ADAM17 (ENSCWAG00000011306) #24	YWHAQ (ENSCWAG00000011406) #25	TAF1B (ENSCWAG00000011471) #26	GRHL1 (ENSCWAG00000011623) #27	KLF11 (ENSCWAG00000011855) #28	CYS1 (ENSCWAG00000012002) #29	RRM2 (ENSCWAG00000012081) #30	HPCAL1 (ENSCWAG00000012123) #31	ODC1 (ENSCWAG00000012155) #32	NOL10 (ENSCWAG00000012218) #33	ATP6V1C2 (ENSCWAG00000012466) #34	PDIA6 (ENSCWAG00000013173) #35	KCNF1 (ENSCWAG00000013309) #36	C2orf50 (ENSCWAG00000013327) #37
Pig	MODERN SPECIES	11	ADI1 (ENSSSCG00000029161)	RNASEH1 (ENSSSCG00000025305)	ENSSSCG00000031088 ##8	COLEC11 (ENSSSCG00000025629) #9	DCDC2C (ENSSSCG00000008651) #11	SOX11 (ENSSSCG00000008649) #13	ENSSSCG00000047407	CMPK2 (ENSSSCG00000008647) #14	RSAD2 (ENSSSCG00000008648) #15	RNF144A (ENSSSCG00000008646) #16	ID2 (ENSSSCG00000008645) #17	KIDINS220 (ENSSSCG00000008644) #18	MBOAT2 (ENSSSCG00000023539) #19	ASAP2 (ENSSSCG00000008642) #20	ITGB1BP1 (ENSSSCG00000029313) #21	CPSF3 (ENSSSCG00000020799) #22	IAH1 (ENSSSCG00000008640) #23	ADAM17 (ENSSSCG00000008641) #24	YWHAQ (ENSSSCG00000008638) ##25	TAF1B (ENSSSCG00000008637) #26	GRHL1 (ENSSSCG00000026068) #27	KLF11 (ENSSSCG00000038643) #28	CYS1 (ENSSSCG00000040267) #29	ENSSSCG00000031741 #30	HPCAL1 (ENSSSCG00000003663) #31	ODC1 (ENSSSCG00000027121) #32	NOL10 (ENSSSCG00000008635) #33	ATP6V1C2 (ENSSSCG00000008634) #34	PDIA6 (ENSSSCG00000008633) #35	KCNF1 (ENSSSCG00000033463) #36	SLC66A3 (ENSSSCG00000008631)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000154459.B #37	ENSGT00940000153916.B	ENSGT01030000234517.D
Alpaca	MODERN SPECIES	64																CPSF3 (ENSVPAG00000008041) #22	IAH1 (ENSVPAG00000008044) #23	ADAM17 (ENSVPAG00000008045) #24	YWHAQ (ENSVPAG00000008047) #25
Arabian camel	MODERN SPECIES	6	ENSCDRG00005014339	EIPR1 (ENSCDRG00005014386)	TRAPPC12 (ENSCDRG00005014434)	ADI1 (ENSCDRG00005014498)	ENSCDRG00005014654 #8	COLEC11 (ENSCDRG00005014714) #9	ALLC (ENSCDRG00005014851) #10	CMPK2 (ENSCDRG00005015247) #14	RSAD2 (ENSCDRG00005015263) #15	RNF144A (ENSCDRG00005015339) #16	ID2 (ENSCDRG00005015367) #17	KIDINS220 (ENSCDRG00005015440) #18	MBOAT2 (ENSCDRG00005016283) #19	ASAP2 (ENSCDRG00005016761) #20	ITGB1BP1 (ENSCDRG00005021375) #21	CPSF3 (ENSCDRG00005021386) #22	IAH1 (ENSCDRG00005021394) #23	ADAM17 (ENSCDRG00005021400) #24	YWHAQ (ENSCDRG00005021407) #25	ENSCDRG00005021412	TAF1B (ENSCDRG00005021414) #26	GRHL1 (ENSCDRG00005021421) #27	KLF11 (ENSCDRG00005021426) #28	RRM2 (ENSCDRG00005021436) #30	HPCAL1 (ENSCDRG00005021441) #31	ODC1 (ENSCDRG00005021445) #32	NOL10 (ENSCDRG00005021454) #33	ATP6V1C2 (ENSCDRG00005021467) #34	PDIA6 (ENSCDRG00005021479) #35	C2orf50 (ENSCDRG00005003354) #37	SLC66A3 (ENSCDRG00005003399)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Cetacea	ANCESTRAL SPECIES	16	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00390000002448	ENSGT00390000008195.d	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195.d.b	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.db.b #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B
Narwhal	MODERN SPECIES	305	MYT1L (ENSMMNG00015008281)	EIPR1 (ENSMMNG00015008117)	TRAPPC12 (ENSMMNG00015008082)	ADI1 (ENSMMNG00015008063)	RNASEH1 (ENSMMNG00015008036)	ENSMMNG00015008005 ##8	COLEC11 (ENSMMNG00015007976) #9	ENSMMNG00015007954	SOX11 (ENSMMNG00015007940) #13	RNF144A (ENSMMNG00015007925) #16	ID2 (ENSMMNG00015007903) #17	KIDINS220 (ENSMMNG00015007796) #18	MBOAT2 (ENSMMNG00015007697) #19	ASAP2 (ENSMMNG00015007585) #20	ITGB1BP1 (ENSMMNG00015007476) #21	CPSF3 (ENSMMNG00015007400) #22	IAH1 (ENSMMNG00015007332) #23	ADAM17 (ENSMMNG00015007247) #24	YWHAQ (ENSMMNG00015007193) #25	TAF1B (ENSMMNG00015007142) #26	GRHL1 (ENSMMNG00015007097) #27	KLF11 (ENSMMNG00015007075) #28	CYS1 (ENSMMNG00015007058) #29	ENSMMNG00015007031 #30	HPCAL1 (ENSMMNG00015007009) #31	ENSMMNG00015006983 #32	NOL10 (ENSMMNG00015006937) #33	ATP6V1C2 (ENSMMNG00015006876) #34	PDIA6 (ENSMMNG00015006773) #35	KCNF1 (ENSMMNG00015006742) #36	SLC66A3 (ENSMMNG00015006697)
Beluga whale	MODERN SPECIES	37									ENSDLEG00000004773	RNF144A (ENSDLEG00000004760) #16	ID2 (ENSDLEG00000004751) #17	KIDINS220 (ENSDLEG00000004637) #18	MBOAT2 (ENSDLEG00000004585) #19	ASAP2 (ENSDLEG00000004523) #20	ITGB1BP1 (ENSDLEG00000004511) #21	CPSF3 (ENSDLEG00000004493) #22	IAH1 (ENSDLEG00000004484) #23	ENSDLEG00000004471	ADAM17 (ENSDLEG00000004858) #24	YWHAQ (ENSDLEG00000004846) #25	TAF1B (ENSDLEG00000004806) #26	GRHL1 (ENSDLEG00000004790) #27	KLF11 (ENSDLEG00000004778) #28	CYS1 (ENSDLEG00000004756) #29	ENSDLEG00000004724 #30	HPCAL1 (ENSDLEG00000004713) #31	ODC1 (ENSDLEG00000004685) #32	NOL10 (ENSDLEG00000004668) #33	ATP6V1C2 (ENSDLEG00000004632) #34	PDIA6 (ENSDLEG00000004606) #35	KCNF1 (ENSDLEG00000004602) #36
Vaquita	MODERN SPECIES	4	TRAPPC12 (ENSPSNG00000022403)	ENSPSNG00000022415	RNASEH1 (ENSPSNG00000022419)	ENSPSNG00000022424 ##8	COLEC11 (ENSPSNG00000022428) #9	DCDC2C (ENSPSNG00000022437) #11	SOX11 (ENSPSNG00000022450) #13	CMPK2 (ENSPSNG00000022458) #14	RSAD2 (ENSPSNG00000022461) #15	RNF144A (ENSPSNG00000022468) #16	ID2 (ENSPSNG00000022474) #17	KIDINS220 (ENSPSNG00000022485) #18	MBOAT2 (ENSPSNG00000022501) #19	ASAP2 (ENSPSNG00000022513) #20	ENSPSNG00000022534 #21	CPSF3 (ENSPSNG00000022538) #22	IAH1 (ENSPSNG00000022542) #23	ADAM17 (ENSPSNG00000022548) #24	YWHAQ (ENSPSNG00000022551) #25	TAF1B (ENSPSNG00000022554) #26	GRHL1 (ENSPSNG00000022556) #27	KLF11 (ENSPSNG00000022558) #28	CYS1 (ENSPSNG00000022560) #29	ENSPSNG00000022562 #30	HPCAL1 (ENSPSNG00000022565) #31	ENSPSNG00000022567 #32	NOL10 (ENSPSNG00000022572) #33	ATP6V1C2 (ENSPSNG00000022577) #34	PDIA6 (ENSPSNG00000022580) #35	KCNF1 (ENSPSNG00000022584) #36	SLC66A3 (ENSPSNG00000004284)
Dolphin	MODERN SPECIES	1074														ASAP2 (ENSTTRG00000000856) #20	ITGB1BP1 (ENSTTRG00000000859) #21	CPSF3 (ENSTTRG00000000861) #22	IAH1 (ENSTTRG00000000865) #23	ADAM17 (ENSTTRG00000000868) #24	YWHAQ (ENSTTRG00000000871) #25
Sperm whale	MODERN SPECIES	3	EIPR1 (ENSPCTG00005010312)	TRAPPC12 (ENSPCTG00005010367)	ADI1 (ENSPCTG00005010460)	RNASEH1 (ENSPCTG00005010508)	RPS7 (ENSPCTG00005010552) #8	COLEC11 (ENSPCTG00005010632) #9	ENSPCTG00005010966	CMPK2 (ENSPCTG00005011012) #14	RSAD2 (ENSPCTG00005011072) #15	RNF144A (ENSPCTG00005011143) #16	KIDINS220 (ENSPCTG00005011195) #18	MBOAT2 (ENSPCTG00005011265) #19	ASAP2 (ENSPCTG00005011387) #20	ENSPCTG00005011590	ENSPCTG00005011637 #21	CPSF3 (ENSPCTG00005011872) #22	IAH1 (ENSPCTG00005012450) #23	ADAM17 (ENSPCTG00005012570) #24	ENSPCTG00005012664	YWHAQ (ENSPCTG00005012710) #25	TAF1B (ENSPCTG00005012791) #26	ENSPCTG00005012849 #27	RRM2 (ENSPCTG00005012888) #30	HPCAL1 (ENSPCTG00005012942) #31	ODC1 (ENSPCTG00005012986) #32	NOL10 (ENSPCTG00005013060) #33	ATP6V1C2 (ENSPCTG00005013317) #34	PDIA6 (ENSPCTG00005013450) #35	KCNF1 (ENSPCTG00005013707) #36	PQLC3 (ENSPCTG00005013870)	ROCK2 (ENSPCTG00005014000)
Blue whale	MODERN SPECIES	4	ENSBMSG00010013971	ENSBMSG00010013937	ENSBMSG00010013901	RNASEH1 (ENSBMSG00010013874)	RPS7 (ENSBMSG00010019975) #8	COLEC11 (ENSBMSG00010019717) #9	DCDC2C (ENSBMSG00010019611) #11	CMPK2 (ENSBMSG00010019458) #14	RSAD2 (ENSBMSG00010019426) #15	RNF144A (ENSBMSG00010019394) #16	ID2 (ENSBMSG00010019337) #17	KIDINS220 (ENSBMSG00010019274) #18	MBOAT2 (ENSBMSG00010019136) #19	ASAP2 (ENSBMSG00010019066) #20	ENSBMSG00010019013 #21	CPSF3 (ENSBMSG00010018925) #22	ENSBMSG00010018884 #23	ADAM17 (ENSBMSG00010018804) #24	YWHAQ (ENSBMSG00010018734) #25	ENSBMSG00010018704	TAF1B (ENSBMSG00010018671) #26	ENSBMSG00010018631 #27	ENSBMSG00010018599 #27	KLF11 (ENSBMSG00010018472) #28	CYS1 (ENSBMSG00010018428) #29	RRM2 (ENSBMSG00010018407) #30	ENSBMSG00010018397	HPCAL1 (ENSBMSG00010018376) #31	ENSBMSG00010018302 #32	NOL10 (ENSBMSG00010018130) #33	ATP6V1C2 (ENSBMSG00010017714) #34
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Yarkand deer	MODERN SPECIES	2	NDUFA8 (ENSCHYG00000016988)	ENSCHYG00000016926	DAB2IP (ENSCHYG00000016211)	ENSCHYG00000016003	ENSCHYG00000015664	ENSCHYG00000015614	CMPK2 (ENSCHYG00000015445) #14	RSAD2 (ENSCHYG00000015364) #15	RNF144A (ENSCHYG00000015190) #16	ID2 (ENSCHYG00000015082) #17	KIDINS220 (ENSCHYG00000013747) #18	MBOAT2 (ENSCHYG00000013496) #19	ENSCHYG00000013479	ASAP2 (ENSCHYG00000012499) #20	ENSCHYG00000012310 #21	CPSF3 (ENSCHYG00000012112) #22	IAH1 (ENSCHYG00000012019) #23	ADAM17 (ENSCHYG00000011771) #24	YWHAQ (ENSCHYG00000011701) #25	ENSCHYG00000011680	TAF1B (ENSCHYG00000011467) #26	GRHL1 (ENSCHYG00000011321) #27	KLF11 (ENSCHYG00000011297) #28	ENSCHYG00000011258 #30	ENSCHYG00000011216	HPCAL1 (ENSCHYG00000011179) #31	ENSCHYG00000011027 #32	NOL10 (ENSCHYG00000010137) #33	ATP6V1C2 (ENSCHYG00000009711) #34	PDIA6 (ENSCHYG00000009406) #35	KCNF1 (ENSCHYG00000009374) #36
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Siberian musk deer	MODERN SPECIES	238	NDUFA8 (ENSMMSG00000003353)	TTLL11 (ENSMMSG00000003370)	DAB2IP (ENSMMSG00000003463)	ENSMMSG00000003726	ENSMMSG00000003739	ENSMMSG00000003765	ENSMMSG00000003776	CMPK2 (ENSMMSG00000003809) #14	RSAD2 (ENSMMSG00000003822) #15	RNF144A (ENSMMSG00000003832) #16	ID2 (ENSMMSG00000003856) #17	KIDINS220 (ENSMMSG00000003882) #18	MBOAT2 (ENSMMSG00000003927) #19	ASAP2 (ENSMMSG00000000274) #20	ENSMMSG00000000578 #21	CPSF3 (ENSMMSG00000000621) #22	ENSMMSG00000000723 #23	ADAM17 (ENSMMSG00000000759) #24	YWHAQ (ENSMMSG00000000770) #25	TAF1B (ENSMMSG00000000824) #26	GRHL1 (ENSMMSG00000000910) #27	KLF11 (ENSMMSG00000001004) #28	CYS1 (ENSMMSG00000001021) #29	ENSMMSG00000001037 #30	HPCAL1 (ENSMMSG00000001078) #31	ENSMMSG00000001108 #32	NOL10 (ENSMMSG00000001168) #33	ATP6V1C2 (ENSMMSG00000001335) #34	ENSMMSG00000001405	PDIA6 (ENSMMSG00000001421) #35	KCNF1 (ENSMMSG00000001477) #36
Bovidae	ANCESTRAL SPECIES	5	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Bos	ANCESTRAL SPECIES	5	ENSGT00390000018089	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00990000204082	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Bos_a	ANCESTRAL SPECIES	6							ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Domestic yak	MODERN SPECIES	28						SOX11 (ENSBGRG00000015914) #13	CMPK2 (ENSBGRG00000015652) #14	RSAD2 (ENSBGRG00000015611) #15	RNF144A (ENSBGRG00000015479) #16	ID2 (ENSBGRG00000015396) #17	ENSBGRG00000015325	KIDINS220 (ENSBGRG00000014341) #18	MBOAT2 (ENSBGRG00000014129) #19	ASAP2 (ENSBGRG00000013865) #20	ITGB1BP1 (ENSBGRG00000013746) #21	CPSF3 (ENSBGRG00000013338) #22	IAH1 (ENSBGRG00000013251) #23	ADAM17 (ENSBGRG00000012923) #24	YWHAQ (ENSBGRG00000012872) #25	ENSBGRG00000012819 ##25	ENSBGRG00000012787	TAF1B (ENSBGRG00000012581) #26	GRHL1 (ENSBGRG00000011381) #27	ENSBGRG00000011303	KLF11 (ENSBGRG00000011215) #28	CYS1 (ENSBGRG00000011167) #29	RRM2 (ENSBGRG00000010858) #30	HPCAL1 (ENSBGRG00000010770) #31	ENSBGRG00000010591 #32	ENSBGRG00000010565	NOL10 (ENSBGRG00000024949) #33
Wild yak	MODERN SPECIES	1783										ID2 (ENSBMUG00000003840) #17	KIDINS220 (ENSBMUG00000003783) #18	MBOAT2 (ENSBMUG00000003625) #19	ENSBMUG00000003596	ASAP2 (ENSBMUG00000003572) #20	ITGB1BP1 (ENSBMUG00000003480) #21	CPSF3 (ENSBMUG00000003413) #22	IAH1 (ENSBMUG00000003367) #23	ADAM17 (ENSBMUG00000003344) #24	YWHAQ (ENSBMUG00000003324) #25
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000008938	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a.e	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.b ##25	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a #32	ENSGT00390000007900 #33	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000004263.b #34	ENSGT00940000155646.c #35
Cow	MODERN SPECIES	2	DAB2IP (ENSBTAG00000008232)	GGTA1 (ENSBTAG00000012090)	ENSBTAG00000039186	ENSBTAG00000039201	SOX11 (ENSBTAG00000050114) #13	ENSBTAG00000051441	CMPK2 (ENSBTAG00000019979) #14	RSAD2 (ENSBTAG00000016061) #15	RNF144A (ENSBTAG00000044064) #16	ENSBTAG00000037793	ID2 (ENSBTAG00000021187) #17	KIDINS220 (ENSBTAG00000007963) #18	MBOAT2 (ENSBTAG00000008160) #19	ASAP2 (ENSBTAG00000002329) #20	ITGB1BP1 (ENSBTAG00000013063) #21	CPSF3 (ENSBTAG00000019735) #22	IAH1 (ENSBTAG00000001140) #23	ADAM17 (ENSBTAG00000001141) #24	YWHAQ (ENSBTAG00000002108) ##25	ENSBTAG00000048394	TAF1B (ENSBTAG00000007543) #26	GRHL1 (ENSBTAG00000007485) #27	KLF11 (ENSBTAG00000046218) #28	CYS1 (ENSBTAG00000052669) #29	RRM2 (ENSBTAG00000008216) #30	HPCAL1 (ENSBTAG00000004259) #31	ODC1 (ENSBTAG00000004256) #32	NOL10 (ENSBTAG00000002716) #33	ATP6V1C2 (ENSBTAG00000001927) #34	PDIA6 (ENSBTAG00000001928) #35	KCNF1 (ENSBTAG00000021283) #36
Hybrid Bos Indicus	MODERN SPECIES	2	NDUFA8 (ENSBIXG00005003287)	TTLL11 (ENSBIXG00005003298)	DAB2IP (ENSBIXG00005005534)	ENSBIXG00005020351	ENSBIXG00005020391	ENSBIXG00005020418	SOX11 (ENSBIXG00005020448) #13	CMPK2 (ENSBIXG00005003470) #14	RSAD2 (ENSBIXG00005020552) #15	RNF144A (ENSBIXG00005020588) #16	ID2 (ENSBIXG00005020723) #17	KIDINS220 (ENSBIXG00005021201) #18	MBOAT2 (ENSBIXG00005021383) #19	ASAP2 (ENSBIXG00005021521) #20	ITGB1BP1 (ENSBIXG00005021598) #21	CPSF3 (ENSBIXG00005003653) #22	IAH1 (ENSBIXG00005021763) #23	ADAM17 (ENSBIXG00005002613) #24	YWHAQ (ENSBIXG00005021830) #25	ENSBIXG00005021842	TAF1B (ENSBIXG00005021864) #26	GRHL1 (ENSBIXG00005003698) #27	KLF11 (ENSBIXG00005021989) #28	ENSBIXG00005003712 #29	RRM2 (ENSBIXG00005022029) #30	HPCAL1 (ENSBIXG00005006887) #31	ENSBIXG00005022099 #32	NOL10 (ENSBIXG00005022242) #33	ENSBIXG00005022288	ENSBIXG00005007375 #34	ENSBIXG00005007689 #35
American bison	MODERN SPECIES	3221	DAB2IP (ENSBBBG00000012385)	ENSBBBG00000012306	ENSBBBG00000002314	ENSBBBG00000002313	ENSBBBG00000012273	ENSBBBG00000012270	RSAD2 (ENSBBBG00000012264) #15	RNF144A (ENSBBBG00000007447) #16	ID2 (ENSBBBG00000012256) #17	KIDINS220 (ENSBBBG00000012237) #18	ENSBBBG00000012162	MBOAT2 (ENSBBBG00000012157) #19	ASAP2 (ENSBBBG00000012138) #20	ENSBBBG00000012059	ITGB1BP1 (ENSBBBG00000012050) #21	CPSF3 (ENSBBBG00000012019) #22	IAH1 (ENSBBBG00000008101) #23	ADAM17 (ENSBBBG00000002244) #24	YWHAQ (ENSBBBG00000011974) #25	TAF1B (ENSBBBG00000011961) #26	GRHL1 (ENSBBBG00000011949) #27	KLF11 (ENSBBBG00000011923) #28	RRM2 (ENSBBBG00000011911) #30	HPCAL1 (ENSBBBG00000007122) #31	ODC1 (ENSBBBG00000011893) #32	NOL10 (ENSBBBG00000002209) #33	ATP6V1C2 (ENSBBBG00000011779) #34	ENSBBBG00000011729 #35	ENSBBBG00000011712	KCNF1 (ENSBBBG00000002161) #36	C2orf50 (ENSBBBG00000011703) #37
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000155699.c #22
Goat	MODERN SPECIES	22	FNDC7 (ENSCHIG00000018554)	ENSCHIG00000024357	HENMT1 (ENSCHIG00000013249)	EEIG2 (ENSCHIG00000018010)	ENSCHIG00000012399	ENSCHIG00000000620	SLC25A24 (ENSCHIG00000023537)	VAV3 (ENSCHIG00000016068)	ENSCHIG00000009992	NTNG1 (ENSCHIG00000020049)	PRMT6 (ENSCHIG00000006399)	ENSCHIG00000016071	ENSCHIG00000021505	ENSCHIG00000025322	ENSCHIG00000013913	ENSCHIG00000009354 #22	ENSCHIG00000025530	ENSCHIG00000015030	RNPC3 (ENSCHIG00000020361)	COL11A1 (ENSCHIG00000012424)	ENSCHIG00000017064 #21	OLFM3 (ENSCHIG00000008401)	S1PR1 (ENSCHIG00000008675)	DPH5 (ENSCHIG00000022866)	SLC30A7 (ENSCHIG00000008776)	EXTL2 (ENSCHIG00000016039)	ENSCHIG00000021886	ENSCHIG00000011792	ENSCHIG00000009839	GPR88 (ENSCHIG00000003315)	CDC14A (ENSCHIG00000014573)
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000156689	ENSGT00940000155853	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.a.d	ENSGT00940000154706.ib	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464.a #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990.k #21	ENSGT00940000155699.d #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a.fb.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020014819	DAB2IP (ENSOARG00020014930)	ENSOARG00020015864	ENSOARG00020016051	ENSOARG00020016131	ENSOARG00020006554	ENSOARG00020006589 #15	CMPK2 (ENSOARG00020006720) #14	ENSOARG00020006787 #15	RNF144A (ENSOARG00020006856) #16	ID2 (ENSOARG00020006940) #17	KIDINS220 (ENSOARG00020007030) #18	MBOAT2 (ENSOARG00020007653) #19	ASAP2 (ENSOARG00020007758) #20	ITGB1BP1 (ENSOARG00020008178) #21	CPSF3 (ENSOARG00020008301) #22	IAH1 (ENSOARG00020008401) #23	ADAM17 (ENSOARG00020008512) #24	YWHAQ (ENSOARG00020008682) #25	TAF1B (ENSOARG00020008727) #26	GRHL1 (ENSOARG00020008773) #27	KLF11 (ENSOARG00020008965) #28	CYS1 (ENSOARG00020009035) #29	ENSOARG00020009097 #30	HPCAL1 (ENSOARG00020009151) #31	ODC1 (ENSOARG00020009225) #32	NOL10 (ENSOARG00020009305) #33	ATP6V1C2 (ENSOARG00020009600) #34	PDIA6 (ENSOARG00020009823) #35	KCNF1 (ENSOARG00020010045) #36	C2orf50 (ENSOARG00020010067) #37
Goat	MODERN SPECIES	2	ENSCHIG00000023562	ENSCHIG00000009248	ENSCHIG00000023895	ENSCHIG00000021333	ENSCHIG00000014881	SOX11 (ENSCHIG00000024868) #13	CMPK2 (ENSCHIG00000012790) #14	RSAD2 (ENSCHIG00000021832) #15	RNF144A (ENSCHIG00000016336) #16	ENSCHIG00000018361 #17	KIDINS220 (ENSCHIG00000026710) #18	MBOAT2 (ENSCHIG00000026251) #19	ENSCHIG00000012410	ASAP2 (ENSCHIG00000022796) #20	ENSCHIG00000020028 #21	CPSF3 (ENSCHIG00000013973) #22	IAH1 (ENSCHIG00000016467) #23	ADAM17 (ENSCHIG00000013595) #24	YWHAQ (ENSCHIG00000012589) #25	ENSCHIG00000012158	TAF1B (ENSCHIG00000013783) #26	ENSCHIG00000026755 #27	KLF11 (ENSCHIG00000011294) #28	CYS1 (ENSCHIG00000018115) #29	ENSCHIG00000004531	RRM2 (ENSCHIG00000009694) #30	HPCAL1 (ENSCHIG00000019475) #31	ENSCHIG00000027003 #32	NOL10 (ENSCHIG00000012935) #33	ATP6V1C2 (ENSCHIG00000017272) #34	PDIA6 (ENSCHIG00000007838) #35
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Carnivora	ANCESTRAL SPECIES	19	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Caniformia	ANCESTRAL SPECIES	18	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Ursidae	ANCESTRAL SPECIES	9	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000012138.a.a.j.s	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Ursus	ANCESTRAL SPECIES	125	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00390000012138.a.a.j.s.a	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Polar bear	MODERN SPECIES	89	RNASEH1 (ENSUMAG00000003941)	RPS7 (ENSUMAG00000003937) #8	COLEC11 (ENSUMAG00000003933) #9	ALLC (ENSUMAG00000003926) #10	ENSUMAG00000003916	ENSUMAG00000003909	ENSUMAG00000003902	RSAD2 (ENSUMAG00000003893) #15	RNF144A (ENSUMAG00000003876) #16	ID2 (ENSUMAG00000003840) #17	KIDINS220 (ENSUMAG00000003833) #18	MBOAT2 (ENSUMAG00000003744) #19	ENSUMAG00000003713	ASAP2 (ENSUMAG00000003695) #20	ITGB1BP1 (ENSUMAG00000003689) #21	CPSF3 (ENSUMAG00000003676) #22	ENSUMAG00000003666 #23	ENSUMAG00000003662 #23	ADAM17 (ENSUMAG00000003653) #24	YWHAQ (ENSUMAG00000003646) #25	TAF1B (ENSUMAG00000003559) #26	GRHL1 (ENSUMAG00000003494) #27	KLF11 (ENSUMAG00000003481) #28	RRM2 (ENSUMAG00000003431) #30	HPCAL1 (ENSUMAG00000003415) #31	ODC1 (ENSUMAG00000003406) #32	NOL10 (ENSUMAG00000003385) #33	ATP6V1C2 (ENSUMAG00000003318) #34	PDIA6 (ENSUMAG00000003308) #35	KCNF1 (ENSUMAG00000003301) #36	C2orf50 (ENSUMAG00000003297) #37
American black bear	MODERN SPECIES	1136													ENSUAMG00000007716	ASAP2 (ENSUAMG00000007571) #20	ITGB1BP1 (ENSUAMG00000007538) #21	CPSF3 (ENSUAMG00000007535) #22	IAH1 (ENSUAMG00000007531) #23	ADAM17 (ENSUAMG00000007528) #24	ENSUAMG00000007526 ##25
Giant Panda	MODERN SPECIES	14	ADI1 (ENSAMEG00000018432)	RNASEH1 (ENSAMEG00000018433)	RPS7 (ENSAMEG00000018435) #8	ALLC (ENSAMEG00000018438) #10	ENSAMEG00000026778 #11	SOX11 (ENSAMEG00000013354) #13	CMPK2 (ENSAMEG00000013345) #14	RSAD2 (ENSAMEG00000013333) #15	RNF144A (ENSAMEG00000013324) #16	ID2 (ENSAMEG00000026711) #17	KIDINS220 (ENSAMEG00000008328) #18	MBOAT2 (ENSAMEG00000008373) #19	ENSAMEG00000024246	ASAP2 (ENSAMEG00000008406) #20	ITGB1BP1 (ENSAMEG00000008478) #21	CPSF3 (ENSAMEG00000008493) #22	IAH1 (ENSAMEG00000008545) #23	ADAM17 (ENSAMEG00000008569) #24	YWHAQ (ENSAMEG00000008618) #25	TAF1B (ENSAMEG00000011301) #26	GRHL1 (ENSAMEG00000011320) #27	KLF11 (ENSAMEG00000011355) #28	RRM2 (ENSAMEG00000011372) #30	HPCAL1 (ENSAMEG00000029791) #31	ODC1 (ENSAMEG00000011415) #32	NOL10 (ENSAMEG00000011438) #33	ATP6V1C2 (ENSAMEG00000011506) #34	ENSAMEG00000011555 #35	KCNF1 (ENSAMEG00000019267) #36	C2orf50 (ENSAMEG00000011580) #37	SLC66A3 (ENSAMEG00000011583)
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00390000003466	ENSGT00390000014122.i.b.b ##8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00990000204082	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Ferret	MODERN SPECIES	178	ENSMPUG00000013120	ENSMPUG00000019478	ENSMPUG00000013122	ENSMPUG00000013127	ENSMPUG00000019479	CMPK2 (ENSMPUG00000013134) #14	RSAD2 (ENSMPUG00000013146) #15	RNF144A (ENSMPUG00000013154) #16	ENSMPUG00000013172	ENSMPUG00000013173	ID2 (ENSMPUG00000013178) #17	KIDINS220 (ENSMPUG00000013181) #18	MBOAT2 (ENSMPUG00000013191) #19	ASAP2 (ENSMPUG00000013197) #20	ITGB1BP1 (ENSMPUG00000013210) #21	CPSF3 (ENSMPUG00000013213) #22	IAH1 (ENSMPUG00000013218) #23	ADAM17 (ENSMPUG00000013236) #24	ENSMPUG00000013249	YWHAQ (ENSMPUG00000013252) #25	TAF1B (ENSMPUG00000013256) #26	GRHL1 (ENSMPUG00000013263) #27	ENSMPUG00000013277	ENSMPUG00000013281	KLF11 (ENSMPUG00000013287) #28	RRM2 (ENSMPUG00000013295) #30	HPCAL1 (ENSMPUG00000013302) #31	ODC1 (ENSMPUG00000013321) #32	NOL10 (ENSMPUG00000013325) #33	ATP6V1C2 (ENSMPUG00000013450) #34	ENSMPUG00000019480
American mink	MODERN SPECIES	7	ADI1 (ENSNVIG00000015966)	RNASEH1 (ENSNVIG00000015913)	ENSNVIG00000015884 ##8	COLEC11 (ENSNVIG00000015826) #9	ALLC (ENSNVIG00000015809) #10	DCDC2C (ENSNVIG00000015778) #11	SOX11 (ENSNVIG00000015756) #13	ENSNVIG00000015750	RSAD2 (ENSNVIG00000015718) #15	R144A (ENSNVIG00000015685) #16	ID2 (ENSNVIG00000015663) #17	KIDINS220 (ENSNVIG00000015535) #18	MBOAT2 (ENSNVIG00000015525) #19	ASAP2 (ENSNVIG00000015416) #20	ITGB1BP1 (ENSNVIG00000015345) #21	CPSF3 (ENSNVIG00000015301) #22	IAH1 (ENSNVIG00000015262) #23	ADAM17 (ENSNVIG00000015197) #24	YWHAQ (ENSNVIG00000015162) #25	TAF1B (ENSNVIG00000015127) #26	GRHL1 (ENSNVIG00000015046) #27	KLF11 (ENSNVIG00000015016) #28	RRM2 (ENSNVIG00000014985) #30	ENSNVIG00000014964	DCOR (ENSNVIG00000014941) #32	NOL10 (ENSNVIG00000014778) #33	ATP6V1C2 (ENSNVIG00000014715) #34	PDIA6 (ENSNVIG00000014505) #35	KCNF1 (ENSNVIG00000014487) #36	C2orf50 (ENSNVIG00000014464) #37	SLC66A3 (ENSNVIG00000014450)
Canidae	ANCESTRAL SPECIES	46	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j.f.a ##8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Dingo	MODERN SPECIES	223	TRAPPC12 (ENSCAFG00020005019)	ADI1 (ENSCAFG00020005017)	RNASEH1 (ENSCAFG00020004994)	COLEC11 (ENSCAFG00020004967) #9	ALLC (ENSCAFG00020004959) #10	DCDC2C (ENSCAFG00020004927) #11	SOX11 (ENSCAFG00020004918) #13	ENSCAFG00020004906	RSAD2 (ENSCAFG00020004883) #15	RNF144A (ENSCAFG00020004868) #16	ID2 (ENSCAFG00020004823) #17	KIDINS220 (ENSCAFG00020002173) #18	MBOAT2 (ENSCAFG00020001936) #19	ASAP2 (ENSCAFG00020000377) #20	ITGB1BP1 (ENSCAFG00020000149) #21	CPSF3 (ENSCAFG00020026799) #22	IAH1 (ENSCAFG00020026797) #23	ENSCAFG00020026796 #24	YWHAQ (ENSCAFG00020026795) #25	TAF1B (ENSCAFG00020026787) #26	GRHL1 (ENSCAFG00020026767) #27	KLF11 (ENSCAFG00020026763) #28	CYS1 (ENSCAFG00020026758) #29	RRM2 (ENSCAFG00020026744) #30	HPCAL1 (ENSCAFG00020026737) #31	ODC1 (ENSCAFG00020026728) #32	NOL10 (ENSCAFG00020026722) #33	ATP6V1C2 (ENSCAFG00020026718) #34	PDIA6 (ENSCAFG00020026714) #35	KCNF1 (ENSCAFG00020026713) #36	C2orf50 (ENSCAFG00020026711) #37
Dog	MODERN SPECIES	8	ADI1 (ENSCAFG00845021388)	RNASEH1 (ENSCAFG00845021474)	RPS7 (ENSCAFG00845021596) ##8	COLEC11 (ENSCAFG00845021783) #9	ALLC (ENSCAFG00845021988) #10	DCDC2C (ENSCAFG00845022069) #11	SOX11 (ENSCAFG00845022195) #13	CMPK2 (ENSCAFG00845022277) #14	RSAD2 (ENSCAFG00845022316) #15	RNF144A (ENSCAFG00845022407) #16	ID2 (ENSCAFG00845022749) #17	KIDINS220 (ENSCAFG00845023013) #18	MBOAT2 (ENSCAFG00845023611) #19	ASAP2 (ENSCAFG00845023702) #20	ITGB1BP1 (ENSCAFG00845024064) #21	CPSF3 (ENSCAFG00845024218) #22	IAH1 (ENSCAFG00845024429) #23	ADAM17 (ENSCAFG00845024728) #24	YWHAQ (ENSCAFG00845025457) #25	TAF1B (ENSCAFG00845025510) #26	GRHL1 (ENSCAFG00845025614) #27	KLF11 (ENSCAFG00845025845) #28	CYS1 (ENSCAFG00845025907) #29	RRM2 (ENSCAFG00845025952) #30	HPCAL1 (ENSCAFG00845026130) #31	ODC1 (ENSCAFG00845026175) #32	NOL10 (ENSCAFG00845026340) #33	ATP6V1C2 (ENSCAFG00845026644) #34	PDIA6 (ENSCAFG00845026954) #35	KCNF1 (ENSCAFG00845027200) #36	C2orf50 (ENSCAFG00845027230) #37
Red fox	MODERN SPECIES	76	ADI1 (ENSVVUG00000008646)	RNASEH1 (ENSVVUG00000008633)	RPS7 (ENSVVUG00000008628) #8	COLEC11 (ENSVVUG00000008618) #9	ALLC (ENSVVUG00000008603) #10	ENSVVUG00000008582 #11	ENSVVUG00000008555	ENSVVUG00000008545	RSAD2 (ENSVVUG00000008530) #15	RNF144A (ENSVVUG00000008507) #16	ID2 (ENSVVUG00000008464) #17	KIDINS220 (ENSVVUG00000003457) #18	MBOAT2 (ENSVVUG00000002534) #19	ASAP2 (ENSVVUG00000002403) #20	ITGB1BP1 (ENSVVUG00000002216) #21	CPSF3 (ENSVVUG00000002194) #22	IAH1 (ENSVVUG00000002169) #23	ADAM17 (ENSVVUG00000002136) #24	YWHAQ (ENSVVUG00000002125) #25	TAF1B (ENSVVUG00000001641) #26	GRHL1 (ENSVVUG00000001610) #27	KLF11 (ENSVVUG00000001585) #28	RRM2 (ENSVVUG00000001484) #30	HPCAL1 (ENSVVUG00000001457) #31	ODC1 (ENSVVUG00000001437) #32	ENSVVUG00000001420	NOL10 (ENSVVUG00000001394) #33	ATP6V1C2 (ENSVVUG00000001351) #34	PDIA6 (ENSVVUG00000001332) #35	KCNF1 (ENSVVUG00000001317) #36	CUNH2orf50 (ENSVVUG00000001296) #37
Felidae	ANCESTRAL SPECIES	3	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Tiger	MODERN SPECIES	581	EIPR1 (ENSPTIG00000018777)	ENSPTIG00000018854	ADI1 (ENSPTIG00000019002)	RNASEH1 (ENSPTIG00000019034)	RPS7 (ENSPTIG00000019474) #8	ALLC (ENSPTIG00000019525) #10	DCDC2C (ENSPTIG00000019551) #11	ENSPTIG00000019591	RSAD2 (ENSPTIG00000019625) #15	RNF144A (ENSPTIG00000019714) #16	ID2 (ENSPTIG00000019724) #17	KIDINS220 (ENSPTIG00000019843) #18	MBOAT2 (ENSPTIG00000020033) #19	ASAP2 (ENSPTIG00000000985) #20	ITGB1BP1 (ENSPTIG00000002156) #21	CPSF3 (ENSPTIG00000003920) #22	IAH1 (ENSPTIG00000005299) #23	ADAM17 (ENSPTIG00000005404) #24	YWHAQ (ENSPTIG00000006178) #25	TAF1B (ENSPTIG00000006228) #26	GRHL1 (ENSPTIG00000007003) #27	KLF11 (ENSPTIG00000007061) #28	RRM2 (ENSPTIG00000007390) #30	ODC1 (ENSPTIG00000007491) #32
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
lion	MODERN SPECIES	3	EIPR1 (ENSPLOG00000001791)	ENSPLOG00000001824	TRAPPC12 (ENSPLOG00000001834)	RNASEH1 (ENSPLOG00000001905)	RPS7 (ENSPLOG00000001995) #8	COLEC11 (ENSPLOG00000002030) #9	ALLC (ENSPLOG00000002071) #10	CMPK2 (ENSPLOG00000002115) #14	RSAD2 (ENSPLOG00000002128) #15	RNF144A (ENSPLOG00000002146) #16	ID2 (ENSPLOG00000002192) #17	KIDINS220 (ENSPLOG00000002235) #18	MBOAT2 (ENSPLOG00000002421) #19	ASAP2 (ENSPLOG00000002531) #20	ITGB1BP1 (ENSPLOG00000002692) #21	CPSF3 (ENSPLOG00000002732) #22	IAH1 (ENSPLOG00000002790) #23	ADAM17 (ENSPLOG00000002823) #24	YWHAQ (ENSPLOG00000002873) #25	ENSPLOG00000002895	TAF1B (ENSPLOG00000002921) #26	GRHL1 (ENSPLOG00000002984) #27	KLF11 (ENSPLOG00000003042) #28	CYS1 (ENSPLOG00000003056) #29	RRM2 (ENSPLOG00000003069) #30	HPCAL1 (ENSPLOG00000003090) #31	ODC1 (ENSPLOG00000003104) #32	NOL10 (ENSPLOG00000003174) #33	ATP6V1C2 (ENSPLOG00000003251) #34	PDIA6 (ENSPLOG00000003350) #35	KCNF1 (ENSPLOG00000003383) #36
leopard	MODERN SPECIES		ADI1 (ENSPPRG00000015485)	RNASEH1 (ENSPPRG00000015513)	RPS7 (ENSPPRG00000015564) #8	COLEC11 (ENSPPRG00000015594) #9	ALLC (ENSPPRG00000015621) #10	DCDC2C (ENSPPRG00000015663) #11	CMPK2 (ENSPPRG00000015716) #14	RSAD2 (ENSPPRG00000015738) #15	RNF144A (ENSPPRG00000015759) #16	ENSPPRG00000015776 #17	ID2 (ENSPPRG00000015804) #17	KIDINS220 (ENSPPRG00000016171) #18	MBOAT2 (ENSPPRG00000016261) #19	ASAP2 (ENSPPRG00000016539) #20	ITGB1BP1 (ENSPPRG00000016726) #21	CPSF3 (ENSPPRG00000016790) #22	IAH1 (ENSPPRG00000016876) #23	ADAM17 (ENSPPRG00000016991) #24	ENSPPRG00000017043	YWHAQ (ENSPPRG00000017069) #25	TAF1B (ENSPPRG00000017125) #26	GRHL1 (ENSPPRG00000017279) #27	KLF11 (ENSPPRG00000017354) #28	RRM2 (ENSPPRG00000017387) #30	ENSPPRG00000017433 #31	HPCAL1 (ENSPPRG00000017486) #31	ODC1 (ENSPPRG00000017534) #32	NOL10 (ENSPPRG00000017868) #33	ATP6V1C2 (ENSPPRG00000018018) #34	PDIA6 (ENSPPRG00000018159) #35	KCNF1 (ENSPPRG00000020006) #36
Cat	MODERN SPECIES	2	ADI1 (ENSFCAG00000025763)	RNASEH1 (ENSFCAG00000025832)	RPS7 (ENSFCAG00000023243) #8	COLEC11 (ENSFCAG00000031800) #9	ALLC (ENSFCAG00000007504) #10	DCDC2C (ENSFCAG00000044946) #11	SOX11 (ENSFCAG00000039092) #13	CMPK2 (ENSFCAG00000022513) #14	RSAD2 (ENSFCAG00000035139) #15	RNF144A (ENSFCAG00000000709) #16	ID2 (ENSFCAG00000026937) #17	KIDINS220 (ENSFCAG00000029422) #18	MBOAT2 (ENSFCAG00000027684) #19	ASAP2 (ENSFCAG00000007850) #20	ITGB1BP1 (ENSFCAG00000034320) #21	CPSF3 (ENSFCAG00000007852) #22	IAH1 (ENSFCAG00000023291) #23	ADAM17 (ENSFCAG00000007853) #24	YWHAQ (ENSFCAG00000007854) ##25	TAF1B (ENSFCAG00000007855) #26	GRHL1 (ENSFCAG00000007856) #27	KLF11 (ENSFCAG00000030965) #28	CYS1 (ENSFCAG00000045113) #29	RRM2 (ENSFCAG00000003942) #30	HPCAL1 (ENSFCAG00000009252) #31	ODC1 (ENSFCAG00000027500) #32	NOL10 (ENSFCAG00000009255) #33	ATP6V1C2 (ENSFCAG00000009257) #34	PDIA6 (ENSFCAG00000009258) #35	KCNF1 (ENSFCAG00000031035) #36	CA3H2orf50 (ENSFCAG00000044685) #37
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Equus	ANCESTRAL SPECIES	7	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Donkey	MODERN SPECIES	26	ADI1 (ENSEASG00005022195)	RNASEH1 (ENSEASG00005022200)	RPS7 (ENSEASG00005022205) #8	COLEC11 (ENSEASG00005037869) #9	ALLC (ENSEASG00005022214) #10	ENSEASG00005022219 #11	ENSEASG00005035871 #13	CMPK2 (ENSEASG00005022223) #14	RSAD2 (ENSEASG00005022224) #15	RNF144A (ENSEASG00005022228) #16	ID2 (ENSEASG00005000025) #17	KIDINS220 (ENSEASG00005000060) #18	MBOAT2 (ENSEASG00005000101) #19	ASAP2 (ENSEASG00005000562) #20	ITGB1BP1 (ENSEASG00005003969) #21	CPSF3 (ENSEASG00005003970) #22	ENSEASG00005026278 #23	ADAM17 (ENSEASG00005004001) #24	YWHAQ (ENSEASG00005004792) #25	TAF1B (ENSEASG00005004803) #26	GRHL1 (ENSEASG00005028173) #27	KLF11 (ENSEASG00005004881) #28	CYS1 (ENSEASG00005025190) #29	RRM2 (ENSEASG00005004892) #30	HPCAL1 (ENSEASG00005004903) #31	ENSEASG00005004910 #32	NOL10 (ENSEASG00005004919) #33	ATP6V1C2 (ENSEASG00005004932) #34	PDIA6 (ENSEASG00005004942) #35	KCNF1 (ENSEASG00005027361) #36	C2orf50 (ENSEASG00005004947) #37
Horse	MODERN SPECIES	6	RPS7 (ENSECAG00000020253) #8	COLEC11 (ENSECAG00000017488) #9	ALLC (ENSECAG00000014068) #10	ENSECAG00000013638 #11	ENSECAG00000053393	SOX11 (ENSECAG00000037831) #13	CMPK2 (ENSECAG00000012773) #14	RSAD2 (ENSECAG00000010055) #15	RNF144A (ENSECAG00000009610) #16	ID2 (ENSECAG00000008738) #17	KIDINS220 (ENSECAG00000019263) #18	MBOAT2 (ENSECAG00000015922) #19	ENSECAG00000054846	ASAP2 (ENSECAG00000024278) #20	ITGB1BP1 (ENSECAG00000024193) #21	CPSF3 (ENSECAG00000019911) #22	IAH1 (ENSECAG00000018250) #23	ADAM17 (ENSECAG00000005760) #24	ENSECAG00000050309	YWHAQ (ENSECAG00000004925) ##25	TAF1B (ENSECAG00000023244) #26	GRHL1 (ENSECAG00000015969) #27	KLF11 (ENSECAG00000015820) #28	CYS1 (ENSECAG00000039359) #29	RRM2 (ENSECAG00000007464) #30	HPCAL1 (ENSECAG00000040270) #31	ODC1 (ENSECAG00000022690) #32	NOL10 (ENSECAG00000015177) #33	ATP6V1C2 (ENSECAG00000010555) #34	PDIA6 (ENSECAG00000022717) #35	KCNF1 (ENSECAG00000002935) #36
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Megabat	MODERN SPECIES	1372														ASAP2 (ENSPVAG00000005303) #20	ITGB1BP1 (ENSPVAG00000005320) #21	CPSF3 (ENSPVAG00000005324) #22	IAH1 (ENSPVAG00000005329) #23	ADAM17 (ENSPVAG00000005332) #24	ENSPVAG00000005334 ##25
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000016845 #29	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Greater horseshoe bat	MODERN SPECIES	4	COLEC11 (ENSRFEG00010010705) #9	ALLC (ENSRFEG00010010543) #10	DCDC2C (ENSRFEG00010010389) #11	SOX11 (ENSRFEG00010010241) #13	ENSRFEG00010010195	CMPK2 (ENSRFEG00010010183) #14	RSAD2 (ENSRFEG00010010140) #15	RNF144A (ENSRFEG00010010097) #16	ENSRFEG00010010062 #17	KIDINS220 (ENSRFEG00010009917) #18	MBOAT2 (ENSRFEG00010009854) #19	ENSRFEG00010009833	ENSRFEG00010009824	ASAP2 (ENSRFEG00010009716) #20	ITGB1BP1 (ENSRFEG00010009640) #21	CPSF3 (ENSRFEG00010009573) #22	IAH1 (ENSRFEG00010009506) #23	ADAM17 (ENSRFEG00010009462) #24	YWHAQ (ENSRFEG00010009419) #25	TAF1B (ENSRFEG00010009242) #26	ENSRFEG00010009191	GRHL1 (ENSRFEG00010008922) #27	KLF11 (ENSRFEG00010008867) #28	CYS1 (ENSRFEG00010008838) #29	ENSRFEG00010008723 #30	HPCAL1 (ENSRFEG00010008686) #31	ODC1 (ENSRFEG00010008653) #32	NOL10 (ENSRFEG00010008527) #33	ATP6V1C2 (ENSRFEG00010008402) #34	PDIA6 (ENSRFEG00010008218) #35	KCNF1 (ENSRFEG00010008182) #36
Microbat	MODERN SPECIES	1345															ITGB1BP1 (ENSMLUG00000010629) #21	CPSF3 (ENSMLUG00000010636) #22	IAH1 (ENSMLUG00000010667) #23	ADAM17 (ENSMLUG00000010676) #24	YWHAQ (ENSMLUG00000005383) #25	TAF1B (ENSMLUG00000002273) #26	GRHL1 (ENSMLUG00000002290) #27	KLF11 (ENSMLUG00000002295) #28	RRM2 (ENSMLUG00000010596) #30	ENSMLUG00000010423 #32	NOL10 (ENSMLUG00000012309) #33	ATP6V1C2 (ENSMLUG00000012207) #34	PDIA6 (ENSMLUG00000012215) #35	SLC66A3 (ENSMLUG00000015653)	ROCK2 (ENSMLUG00000015664)	ENSMLUG00000003384	GREB1 (ENSMLUG00000000221)
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00390000003466	ENSGT00390000014122.j ##8	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Xenarthra	ANCESTRAL SPECIES	395											ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28
Sloth	MODERN SPECIES	1732																CPSF3 (ENSCHOG00000000180) #22	IAH1 (ENSCHOG00000000183) #23	ADAM17 (ENSCHOG00000000187) #24
Armadillo	MODERN SPECIES	1449									ENSDNOG00000042784	ID2 (ENSDNOG00000035918) #17	KIDINS220 (ENSDNOG00000002905) #18	MBOAT2 (ENSDNOG00000041557) #19	ENSDNOG00000041786	ASAP2 (ENSDNOG00000008886) #20	ITGB1BP1 (ENSDNOG00000008930) #21	CPSF3 (ENSDNOG00000008940) #22	IAH1 (ENSDNOG00000009272) #23	ADAM17 (ENSDNOG00000009284) #24	ENSDNOG00000033666	TAF1B (ENSDNOG00000018268) #26	GRHL1 (ENSDNOG00000014493) #27	KLF11 (ENSDNOG00000035689) #28	ENSDNOG00000047738	ENSDNOG00000012581
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00390000003466	ENSGT00390000014122.j ##8	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Tenrec	MODERN SPECIES	4531														ASAP2 (ENSETEG00000003881) #20	ITGB1BP1 (ENSETEG00000003890) #21	CPSF3 (ENSETEG00000003893) #22	IAH1 (ENSETEG00000003899) #23	ADAM17 (ENSETEG00000003902) #24
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122.j ##8	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b.a.a #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Hyrax	MODERN SPECIES	1552																CPSF3 (ENSPCAG00000015042) #22
Elephant	MODERN SPECIES	197	RNASEH1 (ENSLAFG00000015091)	RPS7 (ENSLAFG00000015087) #8	COLEC11 (ENSLAFG00000021841) #9	ALLC (ENSLAFG00000013751) #10	ENSLAFG00000027245	ENSLAFG00000026156	SOX11 (ENSLAFG00000006327) #13	CMPK2 (ENSLAFG00000031856) #14	RSAD2 (ENSLAFG00000017097) #15	RNF144A (ENSLAFG00000001936) #16	ID2 (ENSLAFG00000006910) #17	KIDINS220 (ENSLAFG00000014141) #18	MBOAT2 (ENSLAFG00000008586) #19	ASAP2 (ENSLAFG00000009029) #20	ITGB1BP1 (ENSLAFG00000009036) #21	CPSF3 (ENSLAFG00000009467) #22	IAH1 (ENSLAFG00000009469) #23	ADAM17 (ENSLAFG00000009473) #24	YWHAQ (ENSLAFG00000009482) #25	TAF1B (ENSLAFG00000000782) #26	GRHL1 (ENSLAFG00000009330) #27	KLF11 (ENSLAFG00000032182) #28	ENSLAFG00000026037	RRM2 (ENSLAFG00000003627) #30	HPCAL1 (ENSLAFG00000004069) #31	ODC1 (ENSLAFG00000005330) #32	NOL10 (ENSLAFG00000010489) #33	ATP6V1C2 (ENSLAFG00000022630) #34	PDIA6 (ENSLAFG00000012281) #35	KCNF1 (ENSLAFG00000008774) #36	ENSLAFG00000026811
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000014122.i.b.a.a ##8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT01090000259995.a.b.c.a	ENSGT01090000259995.a.b.c.b
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000014122.i.b.a.a ##8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT01090000259995.a.b.c.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00390000008195	ENSGT00390000003466.d	ENSGT00390000014122.i.b.a.b #8	ENSGT00390000014122.i.b.a.a ##8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b.n #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT01090000259995.a.b.c.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a
Common wonbat	MODERN SPECIES	574																CPSF3 (ENSVURG00010015934) #22	IAH1 (ENSVURG00010015962) #23	ADAM17 (ENSVURG00010015976) #24	YWHAQ (ENSVURG00010015992) #25	GRHL1 (ENSVURG00010016002) #27	KLF11 (ENSVURG00010016043) #28	RRM2 (ENSVURG00010016049) #30	HPCAL1 (ENSVURG00010016057) #31	ODC1 (ENSVURG00010016071) #32	NOL10 (ENSVURG00010016087) #33	ENSVURG00010016104 #34	PDIA6 (ENSVURG00010016129) #35	KCNF1 (ENSVURG00010016135) #36	ENSVURG00010016144	ENSVURG00010016148	ENSVURG00010016160
koala	MODERN SPECIES	47				SOX11 (ENSPCIG00000033221) #13	ENSPCIG00000001705	CMPK2 (ENSPCIG00000014961) #14	RSAD2 (ENSPCIG00000014960) #15	RNF144A (ENSPCIG00000009611) #16	ENSPCIG00000014602	ENSPCIG00000014608	ID2 (ENSPCIG00000014613) #17	KIDINS220 (ENSPCIG00000014624) #18	MBOAT2 (ENSPCIG00000014636) #19	ASAP2 (ENSPCIG00000014642) #20	ITGB1BP1 (ENSPCIG00000031637) #21	CPSF3 (ENSPCIG00000009823) #22	IAH1 (ENSPCIG00000009821) #23	ADAM17 (ENSPCIG00000009820) #24	YWHAQ (ENSPCIG00000022985) #25	GRHL1 (ENSPCIG00000009811) #27	ENSPCIG00000009814	KLF11 (ENSPCIG00000009805) #28	RRM2 (ENSPCIG00000009801) #30	HPCAL1 (ENSPCIG00000028410) #31	ODC1 (ENSPCIG00000028406) #32	NOL10 (ENSPCIG00000022730) #33	ENSPCIG00000022723 #34	PDIA6 (ENSPCIG00000022719) #35	KCNF1 (ENSPCIG00000022717) #36	ENSPCIG00000037026	ENSPCIG00000031028
Wallaby	MODERN SPECIES	168																ENSMEUG00000013117 #22
Tasmanian devil	MODERN SPECIES	1	TRAPPC12 (ENSSHAG00000013794)	ADI1 (ENSSHAG00000031515)	ENSSHAG00000030451	RPS7 (ENSSHAG00000026004) #8	COLEC11 (ENSSHAG00000012488) #9	ALLC (ENSSHAG00000012095) #10	ENSSHAG00000011050 #11	CMPK2 (ENSSHAG00000020558) #14	RSAD2 (ENSSHAG00000028215) #15	RNF144A (ENSSHAG00000007808) #16	ID2 (ENSSHAG00000024722) #17	KIDINS220 (ENSSHAG00000013088) #18	MBOAT2 (ENSSHAG00000012144) #19	ASAP2 (ENSSHAG00000008132) #20	ITGB1BP1 (ENSSHAG00000007675) #21	CPSF3 (ENSSHAG00000007024) #22	IAH1 (ENSSHAG00000006790) #23	ADAM17 (ENSSHAG00000006354) #24	YWHAQ (ENSSHAG00000027258) #25	TAF1B (ENSSHAG00000001155) #26	GRHL1 (ENSSHAG00000002291) #27	ENSSHAG00000005846 #28	ENSSHAG00000026867	ENSSHAG00000009991	CAPN14 (ENSSHAG00000012346)	EHD3 (ENSSHAG00000025583)	XDH (ENSSHAG00000013713)	ENSSHAG00000020888	ENSSHAG00000028280	SRD5A2 (ENSSHAG00000030408)	MEMO1 (ENSSHAG00000028323)
Opossum	MODERN SPECIES		COLEC11 (ENSMODG00000038328) #9	ALLC (ENSMODG00000014520) #10	ENSMODG00000023196 #11	SOX11 (ENSMODG00000036476) #13	CMPK2 (ENSMODG00000014578) #14	RSAD2 (ENSMODG00000042627) #15	RNF144A (ENSMODG00000014586) #16	ENSMODG00000017695	ID2 (ENSMODG00000014618) #17	ENSMODG00000048947	KIDINS220 (ENSMODG00000014660) #18	MBOAT2 (ENSMODG00000014667) #19	ASAP2 (ENSMODG00000014685) #20	ITGB1BP1 (ENSMODG00000014691) #21	ENSMODG00000038673	CPSF3 (ENSMODG00000014703) #22	IAH1 (ENSMODG00000045560) #23	ADAM17 (ENSMODG00000014726) #24	ENSMODG00000014740 #25	TAF1B (ENSMODG00000014747) #26	GRHL1 (ENSMODG00000014753) #27	KLF11 (ENSMODG00000014758) #28	ENSMODG00000014763 #30	ENSMODG00000040102	HPCAL1 (ENSMODG00000014770) #31	ENSMODG00000014779 #32	NOL10 (ENSMODG00000014784) #33	ENSMODG00000014803 #34	PDIA6 (ENSMODG00000014811) #35	ENSMODG00000044983	KCNF1 (ENSMODG00000014817) #36
Platypus	MODERN SPECIES	84	ADI1 (ENSOANG00000015205)	ENSOANG00000050401	RPS7 (ENSOANG00000015206) #8	COLEC11 (ENSOANG00000044447) #9	ALLC (ENSOANG00000010920) #10	ENSOANG00000043470 #11	SOX11 (ENSOANG00000042349) #13	ENSOANG00000036113 #14	RSAD2 (ENSOANG00000049844) #15	RNF144A (ENSOANG00000051094) #16	ID2 (ENSOANG00000002547) #17	KIDINS220 (ENSOANG00000007570) #18	MBOAT2 (ENSOANG00000007571) #19	ASAP2 (ENSOANG00000004708) #20	ITGB1BP1 (ENSOANG00000006950) #21	CPSF3 (ENSOANG00000008577) #22	ENSOANG00000047163 #23	ADAM17 (ENSOANG00000013331) #24
Sauria	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Lepidosauria	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Episquamata	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Laterata	ANCESTRAL SPECIES	13	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Common wall lizard	MODERN SPECIES	11	RPS7 (ENSPMRG00000011523) #8	COLEC11 (ENSPMRG00000011530) #9	ALLC (ENSPMRG00000011540) #10	ENSPMRG00000011567 #11	ENSPMRG00000011572	ENSPMRG00000011574	SOX11 (ENSPMRG00000011579) #13	CMPK2 (ENSPMRG00000011581) #14	RSAD2 (ENSPMRG00000011584) #15	RNF144A (ENSPMRG00000011590) #16	ID2 (ENSPMRG00000011594) #17	KIDINS220 (ENSPMRG00000011602) #18	MBOAT2 (ENSPMRG00000011615) #19	ASAP2 (ENSPMRG00000011623) #20	ITGB1BP1 (ENSPMRG00000011647) #21	CPSF3 (ENSPMRG00000011656) #22	IAH1 (ENSPMRG00000011668) #23	ADAM17 (ENSPMRG00000011682) #24	ENSPMRG00000011696 #25	ENSPMRG00000011699	TAF1B (ENSPMRG00000011702) #26	GRHL1 (ENSPMRG00000011712) #27	KLF11 (ENSPMRG00000011727) #28	RRM2 (ENSPMRG00000011731) #30	NOL10 (ENSPMRG00000011740) #33	HPCAL1 (ENSPMRG00000011758) #31	ODC1 (ENSPMRG00000011766) #32	ATP6V1C2 (ENSPMRG00000011774) #34	PDIA6 (ENSPMRG00000011782) #35	KCNF1 (ENSPMRG00000011788) #36	C2orf50 (ENSPMRG00000002369) #37
Argentine black and white tegu	MODERN SPECIES	9	DCDC2C (ENSSMRG00000006515) #11	SOX11 (ENSSMRG00000006504) #13	ENSSMRG00000006493	ENSSMRG00000006489	ENSSMRG00000006484	ENSSMRG00000006470	CMPK2 (ENSSMRG00000006467) #14	RSAD2 (ENSSMRG00000006397) #15	RNF144A (ENSSMRG00000006394) #16	ENSSMRG00000006368	ID2 (ENSSMRG00000006348) #17	KIDINS220 (ENSSMRG00000006306) #18	MBOAT2 (ENSSMRG00000006296) #19	ASAP2 (ENSSMRG00000006275) #20	ITGB1BP1 (ENSSMRG00000006271) #21	CPSF3 (ENSSMRG00000006269) #22	IAH1 (ENSSMRG00000006268) #23	ADAM17 (ENSSMRG00000006231) #24	YWHAQ (ENSSMRG00000006227) #25	TAF1B (ENSSMRG00000006214) #26	ENSSMRG00000006208 #27	ENSSMRG00000006187 #27	KLF11 (ENSSMRG00000006180) #28	RRM2 (ENSSMRG00000006152) #30	HPCAL1 (ENSSMRG00000006133) #31	ODC1 (ENSSMRG00000006061) #32	NOL10 (ENSSMRG00000006057) #33	ATP6V1C2 (ENSSMRG00000006042) #34	PDIA6 (ENSSMRG00000006032) #35	KCNF1 (ENSSMRG00000006005) #36	SLC66A3 (ENSSMRG00000006003)
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Elapidae	ANCESTRAL SPECIES		ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827.c #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000011297	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Eastern brown snake	MODERN SPECIES	4	ADI1 (ENSPTXG00000010914)	RNASEH1 (ENSPTXG00000010917)	RPS7 (ENSPTXG00000010919) #8	ENSPTXG00000010920	COLEC11 (ENSPTXG00000010922) #9	DCDC2C (ENSPTXG00000010924) #11	SOX11 (ENSPTXG00000010926) #13	CMPK2 (ENSPTXG00000010928) #14	RSAD2 (ENSPTXG00000010934) #15	RNF144A (ENSPTXG00000010943) #16	ID2 (ENSPTXG00000010944) #17	KIDINS220 (ENSPTXG00000010945) #18	MBOAT2 (ENSPTXG00000010950) #19	ASAP2 (ENSPTXG00000010952) #20	ITGB1BP1 (ENSPTXG00000010957) #21	CPSF3 (ENSPTXG00000010959) #22	IAH1 (ENSPTXG00000010961) #23	ADAM17 (ENSPTXG00000010969) #24	YWHAQ (ENSPTXG00000012051) #25	ENSPTXG00000012054 #26	ENSPTXG00000012055 #26	GRHL1 (ENSPTXG00000012057) #27	KLF11 (ENSPTXG00000012059) #28	MTO1 (ENSPTXG00000012060)	RRM2 (ENSPTXG00000012071) #30	HPCAL1 (ENSPTXG00000012834) #31	ODC1 (ENSPTXG00000012836) #32	NOL10 (ENSPTXG00000012838) #33	ATP6V1C2 (ENSPTXG00000012840) #34	PDIA6 (ENSPTXG00000012842) #35	KCNF1 (ENSPTXG00000012843) #36
Mainland tiger snake	MODERN SPECIES	61						SOX11 (ENSNSUG00000020465) #13	CMPK2 (ENSNSUG00000020464) #14	RSAD2 (ENSNSUG00000020463) #15	RNF144A (ENSNSUG00000020462) #16	ID2 (ENSNSUG00000020460) #17	KIDINS220 (ENSNSUG00000020459) #18	MBOAT2 (ENSNSUG00000020458) #19	ENSNSUG00000020457	ASAP2 (ENSNSUG00000020456) #20	ITGB1BP1 (ENSNSUG00000020455) #21	CPSF3 (ENSNSUG00000020429) #22	IAH1 (ENSNSUG00000020427) #23	ADAM17 (ENSNSUG00000020420) #24	YWHAQ (ENSNSUG00000020419) #25	TAF1B (ENSNSUG00000020418) #26	GRHL1 (ENSNSUG00000020417) #27	KLF11 (ENSNSUG00000020416) #28	MTO1 (ENSNSUG00000020415)	RRM2 (ENSNSUG00000020414) #30	HPCAL1 (ENSNSUG00000020412) #31	ODC1 (ENSNSUG00000020411) #32	NOL10 (ENSNSUG00000020410) #33	ATP6V1C2 (ENSNSUG00000020409) #34	PDIA6 (ENSNSUG00000020408) #35	KCNF1 (ENSNSUG00000020407) #36	C2orf50 (ENSNSUG00000020406) #37
Blue-lipped sea krait	MODERN SPECIES	2390															ITGB1BP1 (ENSLLTG00000001900) #21	CPSF3 (ENSLLTG00000001877) #22	IAH1 (ENSLLTG00000001860) #23	ADAM17 (ENSLLTG00000001846) #24
Indian cobra	MODERN SPECIES		RNASEH1 (ENSNNAG00000010875)	RPS7 (ENSNNAG00000010947) #8	COLEC11 (ENSNNAG00000010989) #9	DCDC2C (ENSNNAG00000011041) #11	SOX11 (ENSNNAG00000011078) #13	CMPK2 (ENSNNAG00000011083) #14	RSAD2 (ENSNNAG00000011105) #15	RNF144A (ENSNNAG00000011228) #16	ID2 (ENSNNAG00000011245) #17	ENSNNAG00000011258	KIDINS220 (ENSNNAG00000011277) #18	MBOAT2 (ENSNNAG00000011525) #19	ASAP2 (ENSNNAG00000011592) #20	ITGB1BP1 (ENSNNAG00000011812) #21	ENSNNAG00000011863	CPSF3 (ENSNNAG00000011872) #22	IAH1 (ENSNNAG00000011930) #23	ADAM17 (ENSNNAG00000011958) #24	YWHAQ (ENSNNAG00000012018) #25	TAF1B (ENSNNAG00000012041) #26	GRHL1 (ENSNNAG00000012148) #27	KLF11 (ENSNNAG00000012239) #28	ENSNNAG00000012268	ENSNNAG00000012297	ENSNNAG00000012340	ENSNNAG00000012348	RRM2 (ENSNNAG00000012363) #30	HPCAL1 (ENSNNAG00000012397) #31	ODC1 (ENSNNAG00000012411) #32	NOL10 (ENSNNAG00000012445) #33	ATP6V1C2 (ENSNNAG00000012518) #34
Lizard	MODERN SPECIES		KLHL31 (ENSACAG00000008404)	ENSACAG00000036656	ENSACAG00000035511	CMPK2 (ENSACAG00000007078) #14	RSAD2 (ENSACAG00000039042) #15	RNF144A (ENSACAG00000007048) #16	ENSACAG00000039383	ENSACAG00000040261	ID2 (ENSACAG00000042556) #17	KIDINS220 (ENSACAG00000002386) #18	ENSACAG00000037631	MBOAT2 (ENSACAG00000002267) #19	ENSACAG00000041154	ASAP2 (ENSACAG00000002004) #20	ITGB1BP1 (ENSACAG00000001993) #21	CPSF3 (ENSACAG00000001759) #22	ENSACAG00000021110	IAH1 (ENSACAG00000001615) #23	ADAM17 (ENSACAG00000001356) #24	YWHAQ (ENSACAG00000001306) #25	ENSACAG00000039990	ENSACAG00000040391	ENSACAG00000040523	TAF1B (ENSACAG00000000152) #26	ENSACAG00000040408	GRHL1 (ENSACAG00000000132) #27	KLF11 (ENSACAG00000000128) #28	RRM2 (ENSACAG00000000112) #30	HPCAL1 (ENSACAG00000012561) #31	ODC1 (ENSACAG00000012600) #32	NOL10 (ENSACAG00000012738) #33
tuatara	MODERN SPECIES	1059						ENSSPUG00000015261	SRSF4 (ENSSPUG00000015318)	MECR (ENSSPUG00000015330)	PTPRU (ENSSPUG00000015342)	ENSSPUG00000015377	ID2 (ENSSPUG00000015382) #17	KIDINS220 (ENSSPUG00000015402) #18	MBOAT2 (ENSSPUG00000015454) #19	ASAP2 (ENSSPUG00000015478) #20	ITGB1BP1 (ENSSPUG00000015506) #21	CPSF3 (ENSSPUG00000015525) #22	IAH1 (ENSSPUG00000015596) #23	ADAM17 (ENSSPUG00000015632) #24	YWHAQ (ENSSPUG00000015663) #25	TAF1B (ENSSPUG00000015685) #26	GRHL1 (ENSSPUG00000015713) #27	KLF11 (ENSSPUG00000015734) #28	HPCAL1 (ENSSPUG00000015772) #31	ODC1 (ENSSPUG00000015782) #32	NOL10 (ENSSPUG00000015811) #33	ENSSPUG00000015855 #34	PDIA6 (ENSSPUG00000015876) #35
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
Emydidae	ANCESTRAL SPECIES	8	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT01050000247847	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37
painted turtle	MODERN SPECIES	2390							SOX11 (ENSCPBG00000014153) #13	CMPK2 (ENSCPBG00000014149) #14	RSAD2 (ENSCPBG00000014146) #15	RNF144A (ENSCPBG00000014144) #16	ID2 (ENSCPBG00000014130) #17	KIDINS220 (ENSCPBG00000014107) #18	MBOAT2 (ENSCPBG00000014088) #19	ASAP2 (ENSCPBG00000014081) #20	ITGB1BP1 (ENSCPBG00000014075) #21	CPSF3 (ENSCPBG00000014074) #22	IAH1 (ENSCPBG00000014070) #23	ADAM17 (ENSCPBG00000014063) #24	YWHAQ (ENSCPBG00000014061) #25	TAF1B (ENSCPBG00000014058) #26	GRHL1 (ENSCPBG00000014054) #27	KLF11 (ENSCPBG00000014051) #28	ENSCPBG00000014048	RRM2 (ENSCPBG00000014047) #30	ATP6V1C2 (ENSCPBG00000014032) #34	PDIA6 (ENSCPBG00000014031) #35	KCNF1 (ENSCPBG00000014030) #36	C2orf50 (ENSCPBG00000014027) #37	SLC66A3 (ENSCPBG00000014025)	ROCK2 (ENSCPBG00000014009)	E2F6 (ENSCPBG00000014007)
Three-toed box turtle	MODERN SPECIES	15	RNASEH1 (ENSTMTG00000001541)	RPS7 (ENSTMTG00000001554) #8	COLEC11 (ENSTMTG00000001570) #9	ALLC (ENSTMTG00000001582) #10	DCDC2C (ENSTMTG00000001593) #11	ENSTMTG00000001613	SOX11 (ENSTMTG00000001626) #13	CMPK2 (ENSTMTG00000001631) #14	RSAD2 (ENSTMTG00000001639) #15	RNF144A (ENSTMTG00000001652) #16	ID2 (ENSTMTG00000001659) #17	KIDINS220 (ENSTMTG00000001670) #18	MBOAT2 (ENSTMTG00000001696) #19	ASAP2 (ENSTMTG00000001754) #20	ITGB1BP1 (ENSTMTG00000002109) #21	CPSF3 (ENSTMTG00000002118) #22	IAH1 (ENSTMTG00000002139) #23	ADAM17 (ENSTMTG00000002145) #24	YWHAQ (ENSTMTG00000002159) #25	TAF1B (ENSTMTG00000002170) #26	ENSTMTG00000002182 #27	ENSTMTG00000002187 #27	KLF11 (ENSTMTG00000002194) #28	RRM2 (ENSTMTG00000002199) #30	HPCAL1 (ENSTMTG00000002212) #31	ODC1 (ENSTMTG00000002221) #32	NOL10 (ENSTMTG00000002231) #33	ATP6V1C2 (ENSTMTG00000002250) #34	PDIA6 (ENSTMTG00000002306) #35	KCNF1 (ENSTMTG00000002317) #36	C2orf50 (ENSTMTG00000002318) #37
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Goode s thornscrub tortoise	MODERN SPECIES	17	RPS7 (ENSGEVG00005009060) #8	COLEC11 (ENSGEVG00005009003) #9	ALLC (ENSGEVG00005008921) #10	DCDC2C (ENSGEVG00005008873) #11	ENSGEVG00005008842	SOX11 (ENSGEVG00005008815) #13	ENSGEVG00005008806	CMPK2 (ENSGEVG00005008784) #14	RSAD2 (ENSGEVG00005008769) #15	RNF144A (ENSGEVG00005008742) #16	ID2 (ENSGEVG00005008728) #17	KIDINS220 (ENSGEVG00005008688) #18	MBOAT2 (ENSGEVG00005008645) #19	ASAP2 (ENSGEVG00005008532) #20	ITGB1BP1 (ENSGEVG00005008492) #21	CPSF3 (ENSGEVG00005008438) #22	IAH1 (ENSGEVG00005008414) #23	ADAM17 (ENSGEVG00005008380) #24	YWHAQ (ENSGEVG00005008366) #25	TAF1B (ENSGEVG00005008345) #26	GRHL1 (ENSGEVG00005008039) #27	KLF11 (ENSGEVG00005007934) #28	RRM2 (ENSGEVG00005007899) #30	HPCAL1 (ENSGEVG00005007881) #31	ODC1 (ENSGEVG00005007862) #32	NOL10 (ENSGEVG00005007769) #33	ATP6V1C2 (ENSGEVG00005007637) #34	PDIA6 (ENSGEVG00005007586) #35	KCNF1 (ENSGEVG00005007578) #36	C2orf50 (ENSGEVG00005007561) #37	SLC66A3 (ENSGEVG00005007519)
Abingdon island giant tortoise	MODERN SPECIES	1873											ID2 (ENSCABG00000022747) #17	KIDINS220 (ENSCABG00000022761) #18	MBOAT2 (ENSCABG00000022871) #19	ASAP2 (ENSCABG00000022892) #20	ITGB1BP1 (ENSCABG00000022906) #21	CPSF3 (ENSCABG00000022908) #22
Chinese turtle	MODERN SPECIES	1137										RNF144A (ENSPSIG00000004494) #16	ID2 (ENSPSIG00000004438) #17	KIDINS220 (ENSPSIG00000017562) #18	MBOAT2 (ENSPSIG00000017486) #19	ASAP2 (ENSPSIG00000017299) #20	ITGB1BP1 (ENSPSIG00000016662) #21	CPSF3 (ENSPSIG00000016144) #22	IAH1 (ENSPSIG00000015583) #23	ADAM17 (ENSPSIG00000013693) #24	YWHAQ (ENSPSIG00000012692) #25	TAF1B (ENSPSIG00000012081) #26	GRHL1 (ENSPSIG00000010930) #27	KLF11 (ENSPSIG00000010816) #28	RRM2 (ENSPSIG00000009363) #30
Archosauria	ANCESTRAL SPECIES	3	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000162396 #11	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Australian saltwater crocodile	MODERN SPECIES	38	ENSCPRG00005008536	ENSCPRG00005008530	COLEC11 (ENSCPRG00005008511) #9	ALLC (ENSCPRG00005008494) #10	DCDC2C (ENSCPRG00005008489) #11	SOX11 (ENSCPRG00005008466) #13	CMPK2 (ENSCPRG00005008440) #14	RSAD2 (ENSCPRG00005008433) #15	RNF144A (ENSCPRG00005008430) #16	UBE2F (ENSCPRG00005008370)	ID2 (ENSCPRG00005008324) #17	KIDINS220 (ENSCPRG00005007277) #18	MBOAT2 (ENSCPRG00005007103) #19	ASAP2 (ENSCPRG00005007065) #20	ITGB1BP1 (ENSCPRG00005007062) #21	CPSF3 (ENSCPRG00005007046) #22	IAH1 (ENSCPRG00005007037) #23	ADAM17 (ENSCPRG00005006916) #24	ENSCPRG00005006866 ##25	YWHAQ (ENSCPRG00005006856) #25	TAF1B (ENSCPRG00005006808) #26	GRHL1 (ENSCPRG00005006677) #27	KLF11 (ENSCPRG00005006661) #28	RRM2 (ENSCPRG00005006653) #30	HPCAL1 (ENSCPRG00005006636) #31	ODC1 (ENSCPRG00005006625) #32	NOL10 (ENSCPRG00005006615) #33	ATP6V1C2 (ENSCPRG00005006593) #34	PDIA6 (ENSCPRG00005006586) #35	KCNF1 (ENSCPRG00005006569) #36	C2orf50 (ENSCPRG00005006553) #37
Aves	ANCESTRAL SPECIES	10	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
African ostrich	MODERN SPECIES	790												KIDINS220 (ENSSCUG00000012039) #18	MBOAT2 (ENSSCUG00000012046) #19	ASAP2 (ENSSCUG00000012052) #20	ITGB1BP1 (ENSSCUG00000012054) #21	CPSF3 (ENSSCUG00000012059) #22	IAH1 (ENSSCUG00000012062) #23	ADAM17 (ENSSCUG00000012064) #24	YWHAQ (ENSSCUG00000012068) #25	RRM2 (ENSSCUG00000012069) #30	ENSSCUG00000012072
Neognathae	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B	ENSGT01030000234517.D
Great tit	MODERN SPECIES	22	EIPR1 (ENSPMJG00000010339)	TRAPPC12 (ENSPMJG00000010410)	ADI1 (ENSPMJG00000010411)	RNASEH1 (ENSPMJG00000010412)	RPS7 (ENSPMJG00000010413) #8	COLEC11 (ENSPMJG00000010415) #9	SOX11 (ENSPMJG00000010517) #13	CMPK2 (ENSPMJG00000010562) #14	RSAD2 (ENSPMJG00000010563) #15	RNF144A (ENSPMJG00000010564) #16	ID2 (ENSPMJG00000010632) #17	KIDINS220 (ENSPMJG00000010635) #18	MBOAT2 (ENSPMJG00000010666) #19	ASAP2 (ENSPMJG00000010679) #20	ITGB1BP1 (ENSPMJG00000012392) #21	CPSF3 (ENSPMJG00000012393) #22	IAH1 (ENSPMJG00000012394) #23	ADAM17 (ENSPMJG00000012400) #24	YWHAQ (ENSPMJG00000012403) #25	TAF1B (ENSPMJG00000012405) #26	GRHL1 (ENSPMJG00000012412) #27	KLF11 (ENSPMJG00000012416) #28	RRM2 (ENSPMJG00000012420) #30	HPCAL1 (ENSPMJG00000012424) #31	ODC1 (ENSPMJG00000012426) #32	NOL10 (ENSPMJG00000012429) #33	ATP6V1C2 (ENSPMJG00000012432) #34	PDIA6 (ENSPMJG00000012436) #35	SLC66A3 (ENSPMJG00000012442)	ROCK2 (ENSPMJG00000012447)	E2F6 (ENSPMJG00000012450)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612.p #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B	ENSGT01030000234517.D
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612.p #27	ENSGT00940000157612.o #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	21							ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473) #15	RNF144A (ENSGFOG00000008461) #16	ID2 (ENSGFOG00000008458) #17	KIDINS220 (ENSGFOG00000008427) #18	MBOAT2 (ENSGFOG00000008417) #19	ASAP2 (ENSGFOG00000008371) #20	ITGB1BP1 (ENSGFOG00000008352) #21	ENSGFOG00000008345 #22	ENSGFOG00000008332 #22	IAH1 (ENSGFOG00000008321) #23	ADAM17 (ENSGFOG00000008025) #24	YWHAQ (ENSGFOG00000007990) #25	TAF1B (ENSGFOG00000007971) #26	ENSGFOG00000007959 #27	ENSGFOG00000007956 #27	KLF11 (ENSGFOG00000007951) #28	RRM2 (ENSGFOG00000007690) #30	HPCAL1 (ENSGFOG00000007664) #31	ODC1 (ENSGFOG00000007655) #32	NOL10 (ENSGFOG00000007627) #33	ATP6V1C2 (ENSGFOG00000007570) #34	PDIA6 (ENSGFOG00000007553) #35	KCNF1 (ENSGFOG00000007549) #36	SLC66A3 (ENSGFOG00000007534)
Medium ground finch	MODERN SPECIES	21								ENSGFOG00000008493	RSAD2 (ENSGFOG00000008473) #15	RNF144A (ENSGFOG00000008461) #16	ID2 (ENSGFOG00000008458) #17	KIDINS220 (ENSGFOG00000008427) #18	MBOAT2 (ENSGFOG00000008417) #19	ASAP2 (ENSGFOG00000008371) #20	ITGB1BP1 (ENSGFOG00000008352) #21	ENSGFOG00000008345 #22	ENSGFOG00000008332 #22	IAH1 (ENSGFOG00000008321) #23	ADAM17 (ENSGFOG00000008025) #24	YWHAQ (ENSGFOG00000007990) #25	TAF1B (ENSGFOG00000007971) #26	ENSGFOG00000007959 #27	ENSGFOG00000007956 #27	KLF11 (ENSGFOG00000007951) #28	RRM2 (ENSGFOG00000007690) #30	HPCAL1 (ENSGFOG00000007664) #31	ODC1 (ENSGFOG00000007655) #32	NOL10 (ENSGFOG00000007627) #33	ATP6V1C2 (ENSGFOG00000007570) #34	PDIA6 (ENSGFOG00000007553) #35	KCNF1 (ENSGFOG00000007549) #36
Passeroidea	ANCESTRAL SPECIES		ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00990000204270	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612.o #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000153916.B	ENSGT00990000205825
Zebra finch	MODERN SPECIES	23	MYT1L (ENSTGUG00000012971)	EIPR1 (ENSTGUG00000012973)	TRAPPC12 (ENSTGUG00000012974)	RNASEH1 (ENSTGUG00000012980)	RPS7 (ENSTGUG00000012983) #8	COLEC11 (ENSTGUG00000022930) #9	SOX11 (ENSTGUG00000012987) #13	ENSTGUG00000022230	RSAD2 (ENSTGUG00000012992) #15	RNF144A (ENSTGUG00000022180) #16	ID2 (ENSTGUG00000012998) #17	KIDINS220 (ENSTGUG00000012999) #18	MBOAT2 (ENSTGUG00000013004) #19	ASAP2 (ENSTGUG00000013006) #20	ITGB1BP1 (ENSTGUG00000013015) #21	CPSF3 (ENSTGUG00000013016) #22	IAH1 (ENSTGUG00000013025) #23	ADAM17 (ENSTGUG00000013028) #24	YWHAQ (ENSTGUG00000013035) #25	TAF1B (ENSTGUG00000013037) #26	GRHL1 (ENSTGUG00000013038) #27	KLF11 (ENSTGUG00000013041) #28	RRM2 (ENSTGUG00000013042) #30	HPCAL1 (ENSTGUG00000013044) #31	ODC1 (ENSTGUG00000013045) #32	NOL10 (ENSTGUG00000013047) #33	ATP6V1C2 (ENSTGUG00000013053) #34	PDIA6 (ENSTGUG00000013056) #35	SLC66A3 (ENSTGUG00000026462)	ENSTGUG00000023758	ROCK2 (ENSTGUG00000013067)
Common canary	MODERN SPECIES	1	MYT1L (ENSSCAG00000012053)	EIPR1 (ENSSCAG00000012104)	TRAPPC12 (ENSSCAG00000012110)	ADI1 (ENSSCAG00000012116)	RNASEH1 (ENSSCAG00000012122)	RPS7 (ENSSCAG00000012160) #8	COLEC11 (ENSSCAG00000012167) #9	ENSSCAG00000012187	RSAD2 (ENSSCAG00000012190) #15	RNF144A (ENSSCAG00000012205) #16	ID2 (ENSSCAG00000012234) #17	KIDINS220 (ENSSCAG00000012242) #18	MBOAT2 (ENSSCAG00000012256) #19	ASAP2 (ENSSCAG00000012272) #20	ITGB1BP1 (ENSSCAG00000012285) #21	CPSF3 (ENSSCAG00000012290) #22	IAH1 (ENSSCAG00000012295) #23	ADAM17 (ENSSCAG00000012301) #24	YWHAQ (ENSSCAG00000012308) #25	GRHL1 (ENSSCAG00000012341) #27	KLF11 (ENSSCAG00000012362) #28	RRM2 (ENSSCAG00000012371) #30	HPCAL1 (ENSSCAG00000012381) #31	ODC1 (ENSSCAG00000012395) #32	NOL10 (ENSSCAG00000012402) #33	ATP6V1C2 (ENSSCAG00000012422) #34	PDIA6 (ENSSCAG00000012514) #35	KCNF1 (ENSSCAG00000012548) #36	SLC66A3 (ENSSCAG00000012565)	ROCK2 (ENSSCAG00000012610)	E2F6 (ENSSCAG00000012631)
Flycatcher	MODERN SPECIES	21	ADI1 (ENSFALG00000028712)	RNASEH1 (ENSFALG00000027698)	RPS7 (ENSFALG00000024743) #8	COLEC11 (ENSFALG00000002076) #9	ENSFALG00000024355	SOX11 (ENSFALG00000014554) #13	ENSFALG00000025049	CMPK2 (ENSFALG00000023392) #14	RSAD2 (ENSFALG00000006483) #15	RNF144A (ENSFALG00000027037) #16	ID2 (ENSFALG00000006518) #17	KIDINS220 (ENSFALG00000006522) #18	MBOAT2 (ENSFALG00000006544) #19	ASAP2 (ENSFALG00000006556) #20	ITGB1BP1 (ENSFALG00000026175) #21	CPSF3 (ENSFALG00000006572) #22	IAH1 (ENSFALG00000006579) #23	ADAM17 (ENSFALG00000006611) #24	YWHAQ (ENSFALG00000023362) #25	TAF1B (ENSFALG00000006636) #26	GRHL1 (ENSFALG00000006639) #27	KLF11 (ENSFALG00000006648) #28	ENSFALG00000027922	RRM2 (ENSFALG00000022902) #30	HPCAL1 (ENSFALG00000006653) #31	ODC1 (ENSFALG00000006656) #32	NOL10 (ENSFALG00000006658) #33	ATP6V1C2 (ENSFALG00000006666) #34	PDIA6 (ENSFALG00000006683) #35	KCNF1 (ENSFALG00000014627) #36	SLC66A3 (ENSFALG00000024817)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Kakapo	MODERN SPECIES	23	MYT1L (ENSSHBG00005000594)	EIPR1 (ENSSHBG00005000602)	TRAPPC12 (ENSSHBG00005000603)	ADI1 (ENSSHBG00005006001)	RNASEH1 (ENSSHBG00005006018)	RPS7 (ENSSHBG00005006046) #8	COLEC11 (ENSSHBG00005006078) #9	ENSSHBG00005006101	RSAD2 (ENSSHBG00005006118) #15	RNF144A (ENSSHBG00005006232) #16	ID2 (ENSSHBG00005006245) #17	KIDINS220 (ENSSHBG00005006291) #18	MBOAT2 (ENSSHBG00005006345) #19	ASAP2 (ENSSHBG00005006393) #20	ITGB1BP1 (ENSSHBG00005006432) #21	CPSF3 (ENSSHBG00005006481) #22	IAH1 (ENSSHBG00005006527) #23	ADAM17 (ENSSHBG00005006619) #24	YWHAQ (ENSSHBG00005006806) #25	TAF1B (ENSSHBG00005006841) #26	ENSSHBG00005006892 #27	ENSSHBG00005006922 #27	KLF11 (ENSSHBG00005006947) #28	RRM2 (ENSSHBG00005006975) #30	HPCAL1 (ENSSHBG00005007002) #31	ODC1 (ENSSHBG00005007026) #32	NOL10 (ENSSHBG00005007121) #33	ATP6V1C2 (ENSSHBG00005007157) #34	PDIA6 (ENSSHBG00005007211) #35	KCNF1 (ENSSHBG00005007231) #36	C2orf50 (ENSSHBG00005007249) #37
Golden eagle	MODERN SPECIES	6	TRAPPC12 (ENSACCG00020004825)	ADI1 (ENSACCG00020004813)	RNASEH1 (ENSACCG00020004806)	RPS7 (ENSACCG00020004797) #8	COLEC11 (ENSACCG00020004791) #9	SOX11 (ENSACCG00020004781) #13	CMPK2 (ENSACCG00020004778) #14	RSAD2 (ENSACCG00020004774) #15	RNF144A (ENSACCG00020004762) #16	ENSACCG00020004746	ID2 (ENSACCG00020004736) #17	KIDINS220 (ENSACCG00020014291) #18	MBOAT2 (ENSACCG00020014234) #19	ASAP2 (ENSACCG00020013669) #20	ITGB1BP1 (ENSACCG00020012708) #21	CPSF3 (ENSACCG00020012650) #22	IAH1 (ENSACCG00020012620) #23	ADAM17 (ENSACCG00020012584) #24	YWHAQ (ENSACCG00020012565) #25	TAF1B (ENSACCG00020012536) #26	ENSACCG00020012519 #27	KLF11 (ENSACCG00020012500) #28	RRM2 (ENSACCG00020012338) #30	HPCAL1 (ENSACCG00020012207) #31	ODC1 (ENSACCG00020012187) #32	NOL10 (ENSACCG00020012136) #33	ATP6V1C2 (ENSACCG00020012041) #34	PDIA6 (ENSACCG00020011924) #35	KCNF1 (ENSACCG00020011878) #36	C2orf50 (ENSACCG00020011859) #37	SLC66A3 (ENSACCG00020011809)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Chicken	MODERN SPECIES	22	ADI1 (ENSGALG00010003471)	RNASEH1 (ENSGALG00010002291)	RPS7 (ENSGALG00010003474) #8	COLEC11 (ENSGALG00010003478) #9	SOX11 (ENSGALG00010003543) #13	CMPK2 (ENSGALG00010002380) #14	RSAD2 (ENSGALG00010003583) #15	RNF144A (ENSGALG00010003597) #16	ENSGALG00010003853	ID2 (ENSGALG00010003117) #17	KIDINS220 (ENSGALG00010003160) #18	MBOAT2 (ENSGALG00010003201) #19	ASAP2 (ENSGALG00010003242) #20	ENSGALG00010003244	ITGB1BP1 (ENSGALG00010003253) #21	CPSF3 (ENSGALG00010003272) #22	IAH1 (ENSGALG00010003295) #23	ADAM17 (ENSGALG00010003348) #24	YWHAQ (ENSGALG00010003375) #25	TAF1B (ENSGALG00010004230) #26	GRHL1 (ENSGALG00010002433) #27	KLF11 (ENSGALG00010002444) #28	RRM2 (ENSGALG00010002462) #30	HPCAL1 (ENSGALG00010002474) #31	ODC (ENSGALG00010003604) #32	NOL10 (ENSGALG00010003525) #33	ATP6V1C2 (ENSGALG00010002590) #34	PDIA6 (ENSGALG00010002609) #35	KCNF1 (ENSGALG00010002644) #36	C2orf50 (ENSGALG00010002657) #37	SLC66A3 (ENSGALG00010002673)
Turkey	MODERN SPECIES	11	ENSMGAG00000015960 #36	ENSMGAG00000014013 #34	ENSMGAG00000014014 #35	ENSMGAG00000014012 #33	ENSMGAG00000020117 #33	ENSMGAG00000014011 #32	ENSMGAG00000014010 #31	ENSMGAG00000014009 #30	ENSMGAG00000014008 #28	ENSMGAG00000017891 #27	ENSMGAG00000014007 #27	TAF1B (ENSMGAG00000014006) #26	ENSMGAG00000018898 ##25	ENSMGAG00000014000 #24	ENSMGAG00000014004 #25	CPSF3 (ENSMGAG00000013995) #22	ENSMGAG00000013988 #20	ENSMGAG00000013993 #21	ENSMGAG00000017593	ID2 (ENSMGAG00000013985) #17	ENSMGAG00000013984 #16	ENSMGAG00000019604 #15	ENSMGAG00000013982 #14	ENSMGAG00000019338 #13	ENSMGAG00000013980 #9	RPS7 (ENSMGAG00000013978) #8	ENSMGAG00000013979	ENSMGAG00000013977	ENSMGAG00000013975	ENSMGAG00000013974	TRIB2 (ENSMGAG00000019802)
Japanese quail	MODERN SPECIES	21	EIPR1 (ENSCJPG00005008562)	TRAPPC12 (ENSCJPG00005008564)	ADI1 (ENSCJPG00005008568)	RNASEH1 (ENSCJPG00005008569)	RPS7 (ENSCJPG00005008570) #8	COLEC11 (ENSCJPG00005008571) #9	SOX11 (ENSCJPG00005008603) #13	CMPK2 (ENSCJPG00005008614) #14	RSAD2 (ENSCJPG00005008615) #15	RNF144A (ENSCJPG00005008634) #16	Id2 (ENSCJPG00005008665) #17	KIDINS220 (ENSCJPG00005008683) #18	MBOAT2 (ENSCJPG00005011009) #19	ASAP2 (ENSCJPG00005011015) #20	ITGB1BP1 (ENSCJPG00005011017) #21	CPSF3 (ENSCJPG00005011027) #22	IAH1 (ENSCJPG00005011028) #23	ADAM17 (ENSCJPG00005011030) #24	YWHAQ (ENSCJPG00005011031) #25	TAF1B (ENSCJPG00005011032) #26	GRHL1 (ENSCJPG00005011034) #27	KLF11 (ENSCJPG00005011036) #28	ENSCJPG00005011037	RRM2 (ENSCJPG00005011038) #30	HPCAL1 (ENSCJPG00005011043) #31	ODC1 (ENSCJPG00005011044) #32	NOL10 (ENSCJPG00005011045) #33	ATP6V1C2 (ENSCJPG00005011046) #34	PDIA6 (ENSCJPG00005011047) #35	KCNF1 (ENSCJPG00005011049) #36	C2orf50 (ENSCJPG00005011052) #37
Anatidae	DUPLICATION
Anatidae	ANCESTRAL SPECIES																	ENSGT00940000155699.g #22
Duck	MODERN SPECIES	494																ENSAPLG00000016825 #22
Anatidae	ANCESTRAL SPECIES		ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623.a #20	ENSGT00390000003990 #21	ENSGT00940000155699.h #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT01000000216411	ENSGT00940000154459.B #37
Pink-footed goose	MODERN SPECIES	48	ADI1 (ENSABRG00000009028)	RNASEH1 (ENSABRG00000009041)	RPS7 (ENSABRG00000009056) #8	COLEC11 (ENSABRG00000009065) #9	SOX11 (ENSABRG00000009128) #13	CMPK2 (ENSABRG00000009165) #14	RSAD2 (ENSABRG00000009173) #15	RNF144A (ENSABRG00000009186) #16	ENSABRG00000009192	ENSABRG00000009198	ID2 (ENSABRG00000009225) #17	KIDINS220 (ENSABRG00000009278) #18	MBOAT2 (ENSABRG00000009397) #19	ASAP2 (ENSABRG00000009432) #20	ITGB1BP1 (ENSABRG00000009505) #21	CPSF3 (ENSABRG00000009595) #22	IAH1 (ENSABRG00000010649) #23	ADAM17 (ENSABRG00000010665) #24	YWHAQ (ENSABRG00000010695) #25	TAF1B (ENSABRG00000010705) #26	GRHL1 (ENSABRG00000010717) #27	KLF11 (ENSABRG00000010724) #28	RRM2 (ENSABRG00000010731) #30	HPCAL1 (ENSABRG00000010754) #31	ODC1 (ENSABRG00000010758) #32	NOL10 (ENSABRG00000010777) #33	ATP6V1C2 (ENSABRG00000010781) #34	PDIA6 (ENSABRG00000010799) #35	KCNF1 (ENSABRG00000010814) #36	ENSABRG00000010830	C2orf50 (ENSABRG00000010843) #37
Duck	MODERN SPECIES	21	TRAPPC12 (ENSAPLG00000000576)	ADI1 (ENSAPLG00000001901)	RNASEH1 (ENSAPLG00000001961)	RPS7 (ENSAPLG00000002438) #8	COLEC11 (ENSAPLG00000025748) #9	SOX11 (ENSAPLG00000025127) #13	ENSAPLG00000017954	ENSAPLG00000022011	RSAD2 (ENSAPLG00000006016) #15	RNF144A (ENSAPLG00000006187) #16	ID2 (ENSAPLG00000020880) #17	KIDINS220 (ENSAPLG00000015856) #18	MBOAT2 (ENSAPLG00000015705) #19	ASAP2 (ENSAPLG00000006573) #20	ITGB1BP1 (ENSAPLG00000006929) #21	CPSF3 (ENSAPLG00000006941) #22	IAH1 (ENSAPLG00000007422) #23	ADAM17 (ENSAPLG00000007716) #24	YWHAQ (ENSAPLG00000023697) #25	TAF1B (ENSAPLG00000008537) #26	GRHL1 (ENSAPLG00000008667) #27	KLF11 (ENSAPLG00000009146) #28	ENSAPLG00000030281	RRM2 (ENSAPLG00000009301) #30	ODC1 (ENSAPLG00000009531) #32	NOL10 (ENSAPLG00000009885) #33	ATP6V1C2 (ENSAPLG00000010549) #34	PDIA6 (ENSAPLG00000010864) #35	ENSAPLG00000027989	ENSAPLG00000001506	C2orf50 (ENSAPLG00000011213) #37
Anura	ANCESTRAL SPECIES	32		ENSGT00390000008195	ENSGT00390000003466	ENSGT00390000014122 #8	ENSGT00940000159468 #9	ENSGT00390000001793 #10	ENSGT00940000161652 #13	ENSGT00940000154030.a.b #14	ENSGT00390000013670 #15	ENSGT00940000157701 #16	ENSGT00940000156464 #17	ENSGT00940000156714 #18	ENSGT01030000234564.a.a.a.a.b #19	ENSGT00940000155623 #20	ENSGT00390000003990 #21	ENSGT00940000155699 #22	ENSGT00390000008069 #23	ENSGT00940000155443 #24	ENSGT01090000260040.b.b.b.b #25	ENSGT00440000033827 #26	ENSGT00940000157612 #27	ENSGT00940000155982 #28	ENSGT00390000013305.a.a #30	ENSGT00940000154645.A #31	ENSGT00950000182995.e.a.a.a #32	ENSGT00390000007900 #33	ENSGT00390000004263.b #34	ENSGT00940000155646 #35	ENSGT00940000160213 #36	ENSGT00940000154459.B #37	ENSGT00940000153916.B
Frog	MODERN SPECIES	5	rps7 (ENSXETG00000001209) #8	colec11 (ENSXETG00000001204) #9	allc (ENSXETG00000001201) #10	ENSXETG00000042475	sox11 (ENSXETG00000038964) #13	ENSXETG00000042607	cmpk2 (ENSXETG00000023437) #14	ENSXETG00000046085	rsad2 (ENSXETG00000023435) #15	rnf144a (ENSXETG00000023433) #16	id2 (ENSXETG00000040416) #17	kidins220 (ENSXETG00000008271) #18	mboat2 (ENSXETG00000036035) #19	asap2 (ENSXETG00000008265) #20	itgb1bp1 (ENSXETG00000008264) #21	cpsf3 (ENSXETG00000008263) #22	iah1 (ENSXETG00000026506) #23	adam17 (ENSXETG00000008262) #24	ywhaq (ENSXETG00000007010) #25	taf1b (ENSXETG00000007011) #26	grhl1 (ENSXETG00000007012) #27	klf11 (ENSXETG00000007013) #28	MGC147302 (ENSXETG00000031276)	rrm2.2 (ENSXETG00000036052) #30	ENSXETG00000043226	hpcal1 (ENSXETG00000003521) #31	odc1 (ENSXETG00000003519) #32	nol10 (ENSXETG00000003518) #33	atp6v1c2 (ENSXETG00000003516) #34	pdia6 (ENSXETG00000003512) #35	KCNF1 (ENSXETG00000003508) #36
Leishan spiny toad	MODERN SPECIES	7	KCNF1 (ENSLLEG00000022578) #36	ENSLLEG00000022561	RNF144A (ENSLLEG00000022290) #16	RSAD2 (ENSLLEG00000022201) #15	ENSLLEG00000022143 #14	ENSLLEG00000022123	ENSLLEG00000022091	ID2 (ENSLLEG00000021970) #17	ENSLLEG00000021946	ENSLLEG00000021889	KIDINS220 (ENSLLEG00000021372) #18	MBOAT2 (ENSLLEG00000021230) #19	ASAP2 (ENSLLEG00000019352) #20	ENSLLEG00000019276	ITGB1BP1 (ENSLLEG00000019225) #21	CPSF3 (ENSLLEG00000018593) #22	IAH1 (ENSLLEG00000018504) #23	ENSLLEG00000018485	ADAM17 (ENSLLEG00000017494) #24	YWHAQ (ENSLLEG00000017369) #25	ENSLLEG00000017339	TAF1B (ENSLLEG00000016913) #26	GRHL1 (ENSLLEG00000016275) #27	KLF11 (ENSLLEG00000016184) #28	RRM2 (ENSLLEG00000015723) #30	COPS9 (ENSLLEG00000015618)	ENSLLEG00000015595	ENSLLEG00000015564	ENSLLEG00000015548	ENSLLEG00000015508	ENSLLEG00000015438