Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00390000016534.A ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ENSGT00940000160171 #34 ENSGT00940000156406.b #35 Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 ENSGT00940000160562 #37 Cricetidae_B ANCESTRAL SPECIES 32 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00390000016534.A ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 Prairie vole MODERN SPECIES 352 Sdhaf4 (ENSMOCG00000019322) #7 Smap1 (ENSMOCG00000012663) #8 B3gat2 (ENSMOCG00000008496) #9 ENSMOCG00000008718 #10 Rims1 (ENSMOCG00000016536) #11 Kcnq5 (ENSMOCG00000020453) #12 ENSMOCG00000020341 #13 ENSMOCG00000005557 #14 ENSMOCG00000004441 #15 Rsph9 (ENSMOCG00000002026) #16 ENSMOCG00000021207 #17 Vegfa (ENSMOCG00000003577) #18 1600014C23Rik (ENSMOCG00000015577) #19 Mrpl14 (ENSMOCG00000013481) #20 Tmem63b (ENSMOCG00000014333) #21 Capn11 (ENSMOCG00000012508) #22 Mymx (ENSMOCG00000015430) #23 Slc29a1 (ENSMOCG00000020636) #24 Hsp90ab1 (ENSMOCG00000018428) #25 Slc35b2 (ENSMOCG00000016485) #26 Nfkbie (ENSMOCG00000005380) #27 Tmem151b (ENSMOCG00000022994) #28 Tcte1 (ENSMOCG00000015670) #29 Aars2 (ENSMOCG00000016383) #30 Spats1 (ENSMOCG00000012845) #31 ENSMOCG00000022910 #32 Supt3 (ENSMOCG00000001470) #33 Runx2 (ENSMOCG00000008760) #34 ENSMOCG00000011235 #35 Enpp4 (ENSMOCG00000020772) #36 Enpp5 (ENSMOCG00000022512) #37 Northern American deer mouse MODERN SPECIES 13 Abcc10 (ENSPEMG00000008293) Dlk2 (ENSPEMG00000014891) Tjap1 (ENSPEMG00000000063) Lrrc73 (ENSPEMG00000010422) Yipf3 (ENSPEMG00000013680) Polr1c (ENSPEMG00000006970) Xpo5 (ENSPEMG00000020387) Polh (ENSPEMG00000014884) Gtpbp2 (ENSPEMG00000021976) Mad2l1bp (ENSPEMG00000003113) Rsph9 (ENSPEMG00000011206) #16 Mrps18a (ENSPEMG00000000405) #17 Vegfa (ENSPEMG00000023496) #18 ENSPEMG00000007451 #20 Tmem63b (ENSPEMG00000020790) #21 Capn11 (ENSPEMG00000016267) #22 Mymx (ENSPEMG00000031136) #23 Slc29a1 (ENSPEMG00000012099) #24 ENSPEMG00000020801 #25 Slc35b2 (ENSPEMG00000010433) #26 Nfkbie (ENSPEMG00000009911) #27 Tmem151b (ENSPEMG00000020728) #28 Tcte1 (ENSPEMG00000016228) #29 Aars2 (ENSPEMG00000022933) #30 Spats1 (ENSPEMG00000015089) #31 ENSPEMG00000007860 #32 ENSPEMG00000019806 #33 ENSPEMG00000026605 Runx2 (ENSPEMG00000024867) #34 ENSPEMG00000025325 #35 Enpp4 (ENSPEMG00000025230) #36 Cricetinae ANCESTRAL SPECIES 28 ENSGT00940000161082 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 ENSGT00940000160562 #37 Golden Hamster MODERN SPECIES 649 Zfp318 (ENSMAUG00000016068) Abcc10 (ENSMAUG00000008720) Dlk2 (ENSMAUG00000005674) Tjap1 (ENSMAUG00000000201) Lrrc73 (ENSMAUG00000019479) Yipf3 (ENSMAUG00000019181) Polr1c (ENSMAUG00000014329) Xpo5 (ENSMAUG00000011670) Polh (ENSMAUG00000009711) Gtpbp2 (ENSMAUG00000011899) Mad2l1bp (ENSMAUG00000011492) Rsph9 (ENSMAUG00000010828) #16 Vegfa (ENSMAUG00000007292) #18 Mrpl14 (ENSMAUG00000017756) #20 Tmem63b (ENSMAUG00000007946) #21 Capn11 (ENSMAUG00000001798) #22 Slc29a1 (ENSMAUG00000006341) #24 Hsp90ab1 (ENSMAUG00000018422) #25 Slc35b2 (ENSMAUG00000017236) #26 Nfkbie (ENSMAUG00000012047) #27 ENSMAUG00000010907 Tmem151b (ENSMAUG00000009675) #28 Tcte1 (ENSMAUG00000007852) #29 Aars2 (ENSMAUG00000015966) #30 Spats1 (ENSMAUG00000014422) #31 ENSMAUG00000013120 #32 Supt3 (ENSMAUG00000002447) #33 Runx2 (ENSMAUG00000015728) #34 Enpp4 (ENSMAUG00000013309) #36 Enpp5 (ENSMAUG00000017567) #37 Rcan2 (ENSMAUG00000016625) Murinae ANCESTRAL SPECIES 9 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00390000016534.A ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ENSGT00940000160171 #34 ENSGT00940000156406.b #35 Mus ANCESTRAL SPECIES 16 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00940000168197 ENSGT00550000074922 #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 Mus_A ANCESTRAL SPECIES 10 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922.e.a #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 ENSGT00940000160562 #37 Mus_B ANCESTRAL SPECIES 9 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922.e.a #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 ENSGT00940000160562 #37 Mouse MODERN SPECIES 8 Dlk2 (ENSMUSG00000047428) Tjap1 (ENSMUSG00000012296) Lrrc73 (ENSMUSG00000071073) Yipf3 (ENSMUSG00000071074) Polr1c (ENSMUSG00000067148) Xpo5 (ENSMUSG00000067150) Polh (ENSMUSG00000023953) Gtpbp2 (ENSMUSG00000023952) Mad2l1bp (ENSMUSG00000034509) Rsph9 (ENSMUSG00000023966) #16 Mrps18a (ENSMUSG00000023967) #17 Vegfa (ENSMUSG00000023951) #18 1600014C23Rik (ENSMUSG00000094690) #19 Mrpl14 (ENSMUSG00000023939) #20 Tmem63b (ENSMUSG00000036026) #21 Capn11 (ENSMUSG00000058626) #22 Mymx (ENSMUSG00000079471) #23 Slc29a1 (ENSMUSG00000023942) #24 Hsp90ab1 (ENSMUSG00000023944) #25 Slc35b2 (ENSMUSG00000037089) #26 Nfkbie (ENSMUSG00000023947) #27 Tmem151b (ENSMUSG00000096847) #28 Tcte1 (ENSMUSG00000023949) #29 Aars2 (ENSMUSG00000023938) #30 Spats1 (ENSMUSG00000023935) #31 Cdc5l (ENSMUSG00000023932) #32 Supt3 (ENSMUSG00000038954) #33 Runx2 (ENSMUSG00000039153) #34 Clic5 (ENSMUSG00000023959) #35 Enpp4 (ENSMUSG00000023961) #36 Enpp5 (ENSMUSG00000023960) #37 Mus_C ANCESTRAL SPECIES 9 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 #16 ENSGT00390000006493 #17 ENSGT00940000157284 #18 ENSGT00860000135742 #19 ENSGT00390000001121 #20 ENSGT00940000157084 #21 ENSGT00940000158672 #22 ENSGT00490000044373 #23 ENSGT00950000182898.a.a.a.a.b #24 ENSGT01020000230401.a.a.a.i.a.a #25 ENSGT00940000157927 #26 ENSGT00940000159120 #27 ENSGT00390000013762.b.a #28 ENSGT00940000159341 #29 ENSGT00940000158246 #30 ENSGT00390000006786 #31 ENSGT00550000074922.f #32 ENSGT00390000010738 #33 ENSGT00940000160171 #34 ENSGT00940000156406.b #35 ENSGT00940000158831 #36 ENSGT00940000160562 #37 spretus MODERN SPECIES 8 Dlk2 (MGP_SPRETEiJ_G0022578) Tjap1 (MGP_SPRETEiJ_G0022577) Lrrc73 (MGP_SPRETEiJ_G0022576) Yipf3 (MGP_SPRETEiJ_G0022575) Polr1c (MGP_SPRETEiJ_G0022574) Xpo5 (MGP_SPRETEiJ_G0022573) Polh (MGP_SPRETEiJ_G0022572) Gtpbp2 (MGP_SPRETEiJ_G0022571) Mad2l1bp (MGP_SPRETEiJ_G0022570) Rsph9 (MGP_SPRETEiJ_G0022569) #16 Mrps18a (MGP_SPRETEiJ_G0022568) #17 Vegfa (MGP_SPRETEiJ_G0022567) #18 1600014C23Rik (MGP_SPRETEiJ_G0022566) #19 Mrpl14 (MGP_SPRETEiJ_G0022565) #20 Tmem63b (MGP_SPRETEiJ_G0022564) #21 Capn11 (MGP_SPRETEiJ_G0022563) #22 Mymx (MGP_SPRETEiJ_G0022562) #23 Slc29a1 (MGP_SPRETEiJ_G0022561) #24 Hsp90ab1 (MGP_SPRETEiJ_G0022560) #25 Slc35b2 (MGP_SPRETEiJ_G0022559) #26 Nfkbie (MGP_SPRETEiJ_G0022558) #27 Tmem151b (MGP_SPRETEiJ_G0022557) #28 Tcte1 (MGP_SPRETEiJ_G0022556) #29 Aars2 (MGP_SPRETEiJ_G0022555) #30 MGP_SPRETEiJ_G0022554 #31 MGP_SPRETEiJ_G0022553 #32 Supt3 (MGP_SPRETEiJ_G0022552) #33 Runx2 (MGP_SPRETEiJ_G0022551) #34 MGP_SPRETEiJ_G0022550 #35 Enpp4 (MGP_SPRETEiJ_G0022549) #36 Enpp5 (MGP_SPRETEiJ_G0022548) #37 Steppe mouse MODERN SPECIES 3324 Tmem63b (ENSMSIG00000023301) #21 Capn11 (ENSMSIG00000023352) #22 Mymx (ENSMSIG00000023403) #23 Slc29a1 (ENSMSIG00000023420) #24 ENSMSIG00000023496 ##25 Slc35b2 (ENSMSIG00000023500) #26 Nfkbie (ENSMSIG00000023528) #27 Tmem151b (ENSMSIG00000023557) #28 Tcte1 (ENSMSIG00000023567) #29 Aars2 (ENSMSIG00000023583) #30 Spats1 (ENSMSIG00000023603) #31 ENSMSIG00000023672 ENSMSIG00000023679 Cdc5l (ENSMSIG00000023681) #32 ENSMSIG00000023729 Supt3 (ENSMSIG00000023732) #33 ENSMSIG00000023769 #34 Ryukyu mouse MODERN SPECIES 8 Dlk2 (MGP_CAROLIEiJ_G0021666) Tjap1 (MGP_CAROLIEiJ_G0021665) Lrrc73 (MGP_CAROLIEiJ_G0021664) Yipf3 (MGP_CAROLIEiJ_G0021663) Polr1c (MGP_CAROLIEiJ_G0021662) Xpo5 (MGP_CAROLIEiJ_G0021661) Polh (MGP_CAROLIEiJ_G0021660) Gtpbp2 (MGP_CAROLIEiJ_G0021659) Mad2l1bp (MGP_CAROLIEiJ_G0021658) Rsph9 (MGP_CAROLIEiJ_G0021657) #16 Mrps18a (MGP_CAROLIEiJ_G0021656) #17 MGP_CAROLIEiJ_G0021655 #18 MGP_CAROLIEiJ_G0021654 #19 Mrpl14 (MGP_CAROLIEiJ_G0021653) #20 Tmem63b (MGP_CAROLIEiJ_G0021652) #21 Capn11 (MGP_CAROLIEiJ_G0021651) #22 MGP_CAROLIEiJ_G0021650 #23 Slc29a1 (MGP_CAROLIEiJ_G0021649) #24 Hsp90ab1 (MGP_CAROLIEiJ_G0021648) #25 Slc35b2 (MGP_CAROLIEiJ_G0021647) #26 Nfkbie (MGP_CAROLIEiJ_G0021646) #27 Tmem151b (MGP_CAROLIEiJ_G0021645) #28 Tcte1 (MGP_CAROLIEiJ_G0021644) #29 Aars2 (MGP_CAROLIEiJ_G0021643) #30 MGP_CAROLIEiJ_G0021642 #31 Cdc5l (MGP_CAROLIEiJ_G0021641) #32 Supt3 (MGP_CAROLIEiJ_G0021640) #33 Runx2 (MGP_CAROLIEiJ_G0021639) #34 MGP_CAROLIEiJ_G0021638 #35 Enpp4 (MGP_CAROLIEiJ_G0021637) #36 Enpp5 (MGP_CAROLIEiJ_G0021636) #37 Shrew mouse MODERN SPECIES 9 Dlk2 (MGP_PahariEiJ_G0020658) MGP_PahariEiJ_G0020657 Lrrc73 (MGP_PahariEiJ_G0020656) Yipf3 (MGP_PahariEiJ_G0020655) Polr1c (MGP_PahariEiJ_G0020654) Xpo5 (MGP_PahariEiJ_G0020653) Polh (MGP_PahariEiJ_G0020652) Gtpbp2 (MGP_PahariEiJ_G0020651) Mad2l1bp (MGP_PahariEiJ_G0020650) Rsph9 (MGP_PahariEiJ_G0020649) #16 Mrps18a (MGP_PahariEiJ_G0020648) #17 Vegfa (MGP_PahariEiJ_G0020647) #18 1600014C23Rik (MGP_PahariEiJ_G0020646) #19 Mrpl14 (MGP_PahariEiJ_G0020645) #20 Tmem63b (MGP_PahariEiJ_G0020644) #21 Capn11 (MGP_PahariEiJ_G0020643) #22 MGP_PahariEiJ_G0020642 #23 Slc29a1 (MGP_PahariEiJ_G0020641) #24 MGP_PahariEiJ_G0020640 ##25 Slc35b2 (MGP_PahariEiJ_G0020639) #26 Nfkbie (MGP_PahariEiJ_G0020638) #27 Tmem151b (MGP_PahariEiJ_G0020637) #28 Tcte1 (MGP_PahariEiJ_G0020636) #29 Aars2 (MGP_PahariEiJ_G0020635) #30 MGP_PahariEiJ_G0020634 MGP_PahariEiJ_G0020633 #32 Supt3 (MGP_PahariEiJ_G0020632) #33 Runx2 (MGP_PahariEiJ_G0020631) #34 MGP_PahariEiJ_G0020630 #35 Enpp4 (MGP_PahariEiJ_G0020629) #36 Enpp5 (MGP_PahariEiJ_G0020628) #37 Rat MODERN SPECIES 19 Tjap1 (ENSRNOG00000018980) Lrrc73 (ENSRNOG00000039856) Yipf3 (ENSRNOG00000018998) Polr1c (ENSRNOG00000019079) Xpo5 (ENSRNOG00000019085) Polh (ENSRNOG00000019195) Gtpbp2 (ENSRNOG00000019332) Rps2-ps6 (ENSRNOG00000022934) Mad2l1bp (ENSRNOG00000019463) Rsph9 (ENSRNOG00000019474) #16 Mrps18a (ENSRNOG00000019511) #17 Vegfa (ENSRNOG00000019598) #18 Aars2 (ENSRNOG00000025808) #30 Mrpl14 (ENSRNOG00000019734) #20 Tmem63b (ENSRNOG00000019743) #21 Capn11 (ENSRNOG00000026025) #22 Mymx (ENSRNOG00000042497) #23 Slc29a1 (ENSRNOG00000019752) #24 Hsp90ab1 (ENSRNOG00000019834) #25 Nfkbie (ENSRNOG00000019907) #27 Slc35b2 (ENSRNOG00000019900) #26 Tmem151b (ENSRNOG00000019961) #28 Tcte1 (ENSRNOG00000065569) #29 Spats1 (ENSRNOG00000019963) #31 LOC103690502 (ENSRNOG00000064080) Cdc5l (ENSRNOG00000019975) #32 LOC102551267 (ENSRNOG00000049311) Supt3h (ENSRNOG00000020153) #33 Znrd1as (ENSRNOG00000020166) Runx2 (ENSRNOG00000020193) #34 Clic5 (ENSRNOG00000047218) #35