Vertebrata ANCESTRAL SPECIES ENSGT00950000182848.c.b.b #22 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 1155 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 Euteleostomi ANCESTRAL SPECIES 67 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000162362 #17 ENSGT00950000182844.b.a #9 ENSGT00390000011892 ENSGT01100000263524.D ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 ENSGT00940000153141.A ENSGT00940000160098 ENSGT00940000161217 ENSGT00390000017067 Sarcopterygii ANCESTRAL SPECIES 615 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159693 ENSGT00940000163547 Amniota ANCESTRAL SPECIES 1 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000162013 #14 ENSGT00940000162362 #17 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097 ENSGT00390000014037 Mammalia ANCESTRAL SPECIES 38 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b Theria ANCESTRAL SPECIES 4 ENSGT00940000157566 ENSGT00940000162401 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000161750 ENSGT00940000154526.h #32 ENSGT00940000158807 ENSGT00390000014256 Eutheria ANCESTRAL SPECIES 9 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00410000029004 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Glires ANCESTRAL SPECIES 5 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Rodentia ANCESTRAL SPECIES 6 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Rodentia_B ANCESTRAL SPECIES 8 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00390000011908 Myomorpha ANCESTRAL SPECIES 11 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h.i.b ##32 Muroidea ANCESTRAL SPECIES 42 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h.i.b ##32 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00840000130532 #11 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000163367.g.a ##31 ENSGT00940000154526.h.i.b ##32 ENSGT00940000154353.A #33 ENSGT00940000155933.b.a #34 ENSGT00940000155933.b.b ##34 ENSGT00940000155134 #35 Murinae ANCESTRAL SPECIES 9 ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00840000130532.b.a.a #11 ENSGT00840000130532.b.a.b #12 ENSGT00840000130532.a.a #13 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT01000000215862 #16 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000154526.h.j #32 ENSGT00940000154353.A.b #33 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 ENSGT00940000159583 #37 Mus ANCESTRAL SPECIES 5 ENSGT00940000162362 #17 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000154353.A.a ##33 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 ENSGT00940000159583 #37 ENSGT00940000155884 Mus_A ANCESTRAL SPECIES 5 ENSGT00950000182878.b.a.c.a.b ENSGT00940000157063 ENSGT00940000154977 ENSGT00940000156908 ENSGT00390000011717 ENSGT00390000018710 ENSGT00390000000742 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 #17 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000154353.A.a ##33 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 ENSGT00940000159583 #37 ENSGT00940000155884 Mus_B ANCESTRAL SPECIES 21 ENSGT00950000182878.b.a.c.a.b ENSGT00940000157063 ENSGT00940000154977 ENSGT00940000156908 ENSGT00390000011717 ENSGT00390000018710 ENSGT00390000000742 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 #17 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000154353.A.a.b ##33 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00950000182985.b.b ENSGT00390000018730.B #36 ENSGT00940000159583 #37 Mus_C ANCESTRAL SPECIES 1 ENSGT00950000182878.b.a.c.a.b ENSGT00940000157063 ENSGT00940000154977 ENSGT00940000156908 ENSGT00390000011717 ENSGT00390000018710 ENSGT00390000000742 ENSGT00940000156130.b ENSGT00940000159124 ENSGT00940000158635 ENSGT00940000156473 ENSGT00940000162362 #17 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000154353.A.a.b ##33 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00950000182985.b.b ENSGT00390000018730.B #36 ENSGT00940000159583 #37 ENSGT00940000155884 ENSGT00390000009155 Steppe mouse MODERN SPECIES 2691 Tfap2d (ENSMSIG00000019367) #21 Tfap2b (ENSMSIG00000019378) #22 ENSMSIG00000019444 spretus MODERN SPECIES Rpl7 (MGP_SPRETEiJ_G0014770) Rdh10 (MGP_SPRETEiJ_G0014771) Stau2 (MGP_SPRETEiJ_G0014772) MGP_SPRETEiJ_G0014773 Eloc (MGP_SPRETEiJ_G0014774) Tmem70 (MGP_SPRETEiJ_G0014775) Ly96 (MGP_SPRETEiJ_G0014776) Jph1 (MGP_SPRETEiJ_G0014777) Gdap1 (MGP_SPRETEiJ_G0014778) Pi15 (MGP_SPRETEiJ_G0014779) Crispld1 (MGP_SPRETEiJ_G0014780) Crisp4 (MGP_SPRETEiJ_G0014781) #17 Defb18 (MGP_SPRETEiJ_G0014782) #19 Defb41 (MGP_SPRETEiJ_G0014783) #20 Tfap2d (MGP_SPRETEiJ_G0014784) #21 Tfap2b (MGP_SPRETEiJ_G0014785) #22 MGP_SPRETEiJ_G0014786 #23 Il17a (MGP_SPRETEiJ_G0014787) #24 Il17f (MGP_SPRETEiJ_G0014788) #25 Mcm3 (MGP_SPRETEiJ_G0014789) #26 Paqr8 (MGP_SPRETEiJ_G0014790) #27 Efhc1 (MGP_SPRETEiJ_G0014791) #28 Tram2 (MGP_SPRETEiJ_G0014792) #29 MGP_SPRETEiJ_G0014793 #30 Gsta3 (MGP_SPRETEiJ_G0014794) #31 Kcnq5 (MGP_SPRETEiJ_G0014795) #34 MGP_SPRETEiJ_G0014796 #35 Ppp1r14bl (MGP_SPRETEiJ_G0014797) Ogfrl1 (MGP_SPRETEiJ_G0014798) #36 B3gat2 (MGP_SPRETEiJ_G0014799) #37 Smap1 (MGP_SPRETEiJ_G0014800) Mouse MODERN SPECIES Rpl7 (ENSMUSG00000043716) Rdh10 (ENSMUSG00000025921) Stau2 (ENSMUSG00000025920) Ube2w (ENSMUSG00000025939) Eloc (ENSMUSG00000079658) Tmem70 (ENSMUSG00000025940) Ly96 (ENSMUSG00000025779) Jph1 (ENSMUSG00000042686) Gdap1 (ENSMUSG00000025777) Pi15 (ENSMUSG00000067780) Crispld1 (ENSMUSG00000025776) Crisp4 (ENSMUSG00000025774) #17 Defb18 (ENSMUSG00000073735) #19 Defb41 (ENSMUSG00000067773) #20 Tfap2d (ENSMUSG00000042596) #21 Tfap2b (ENSMUSG00000025927) #22 Pkhd1 (ENSMUSG00000043760) #23 Il17a (ENSMUSG00000025929) #24 Il17f (ENSMUSG00000041872) #25 Mcm3 (ENSMUSG00000041859) #26 Paqr8 (ENSMUSG00000025931) #27 Efhc1 (ENSMUSG00000041809) #28 Tram2 (ENSMUSG00000041779) #29 Tmem14a (ENSMUSG00000025933) #30 Gsta3 (ENSMUSG00000025934) #31 Khdc1a (ENSMUSG00000067750) ##33 Khdc1c (ENSMUSG00000041722) ##33 Khdc1b (ENSMUSG00000085079) ##33 Kcnq5 (ENSMUSG00000028033) #34 Rims1 (ENSMUSG00000041670) #35 Ppp1r14bl (ENSMUSG00000073730) Ryukyu mouse MODERN SPECIES Rpl7 (MGP_CAROLIEiJ_G0013965) Rdh10 (MGP_CAROLIEiJ_G0013966) Stau2 (MGP_CAROLIEiJ_G0013967) MGP_CAROLIEiJ_G0013968 Eloc (MGP_CAROLIEiJ_G0013969) Tmem70 (MGP_CAROLIEiJ_G0013970) Ly96 (MGP_CAROLIEiJ_G0013971) Jph1 (MGP_CAROLIEiJ_G0013972) Gdap1 (MGP_CAROLIEiJ_G0013973) Pi15 (MGP_CAROLIEiJ_G0013974) Crispld1 (MGP_CAROLIEiJ_G0013975) Crisp4 (MGP_CAROLIEiJ_G0013976) #17 Defb18 (MGP_CAROLIEiJ_G0013977) #19 Defb41 (MGP_CAROLIEiJ_G0013978) #20 Tfap2d (MGP_CAROLIEiJ_G0013979) #21 Tfap2b (MGP_CAROLIEiJ_G0013980) #22 Pkhd1 (MGP_CAROLIEiJ_G0013981) #23 Il17a (MGP_CAROLIEiJ_G0013982) #24 Il17f (MGP_CAROLIEiJ_G0013983) #25 Mcm3 (MGP_CAROLIEiJ_G0013984) #26 Paqr8 (MGP_CAROLIEiJ_G0013985) #27 Efhc1 (MGP_CAROLIEiJ_G0013986) #28 Tram2 (MGP_CAROLIEiJ_G0013987) #29 Tmem14a (MGP_CAROLIEiJ_G0013988) #30 MGP_CAROLIEiJ_G0013989 ##33 MGP_CAROLIEiJ_G0013990 ##33 MGP_CAROLIEiJ_G0013991 #34 MGP_CAROLIEiJ_G0013992 #35 Ppp1r14bl (MGP_CAROLIEiJ_G0013993) Ogfrl1 (MGP_CAROLIEiJ_G0013994) #36 B3gat2 (MGP_CAROLIEiJ_G0013995) #37 Shrew mouse MODERN SPECIES 18 Crisp4 (MGP_PahariEiJ_G0027226) #17 Defb18 (MGP_PahariEiJ_G0027227) #19 Defb41 (MGP_PahariEiJ_G0027228) #20 Tfap2d (MGP_PahariEiJ_G0027229) #21 Tfap2b (MGP_PahariEiJ_G0027230) #22 Pkhd1 (MGP_PahariEiJ_G0027231) #23 Il17a (MGP_PahariEiJ_G0027232) #24 Il17f (MGP_PahariEiJ_G0027233) #25 Mcm3 (MGP_PahariEiJ_G0027234) #26 Paqr8 (MGP_PahariEiJ_G0027235) #27 Efhc1 (MGP_PahariEiJ_G0027236) #28 Tram2 (MGP_PahariEiJ_G0027237) #29 Tmem14a (MGP_PahariEiJ_G0027238) #30 Gsta3 (MGP_PahariEiJ_G0027239) #31 Kcnq5 (MGP_PahariEiJ_G0027240) #34 MGP_PahariEiJ_G0027241 #35 Ppp1r14bl (MGP_PahariEiJ_G0027242) MGP_PahariEiJ_G0027243 #36 B3gat2 (MGP_PahariEiJ_G0027244) #37 Smap1 (MGP_PahariEiJ_G0027245) Rat MODERN SPECIES 19 Crisp2 (ENSRNOG00000013225) #10 ENSRNOG00000068915 #11 LOC102553880 (ENSRNOG00000039663) #12 LOC108351994 (ENSRNOG00000063860) ##11 ENSRNOG00000066672 ##11 Crisp3 (ENSRNOG00000013496) #14 Pgk2 (ENSRNOG00000013600) #15 ENSRNOG00000066520 #16 Crisp1 (ENSRNOG00000013612) #17 Defb49 (ENSRNOG00000039651) #18 Defb18 (ENSRNOG00000039650) #19 Defb16 (ENSRNOG00000066154) ENSRNOG00000069864 ENSRNOG00000064433 Tfap2d (ENSRNOG00000011642) #21 Tfap2b (ENSRNOG00000011823) #22 Pkhd1 (ENSRNOG00000058742) #23 Il17a (ENSRNOG00000012467) #24 Il17f (ENSRNOG00000012509) #25 Mcm3 (ENSRNOG00000012543) #26 Paqr8 (ENSRNOG00000067120) #27 Efhc1 (ENSRNOG00000042729) #28 Tram2 (ENSRNOG00000013046) #29 RGD1562107 (ENSRNOG00000024755) Tmem14a (ENSRNOG00000013238) #30 Gsta3 (ENSRNOG00000056847) #31 ENSRNOG00000064063 Gsta1 (ENSRNOG00000013484) ##31 Rpl10a-ps1 (ENSRNOG00000063674) Tmem14a (ENSRNOG00000046593) #30 Gsta6 (ENSRNOG00000033402) ##32 Cricetidae ANCESTRAL SPECIES 9 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.l #10 ENSGT00840000130532 #11 ENSGT00940000162013 #14 ENSGT00940000156439.k #10 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000154526.h.i.b ##32 ENSGT00940000163367.g.a ##31 ENSGT00940000155933.b.a #34 ENSGT00940000155933.b.b ##34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 Cricetinae ANCESTRAL SPECIES 28 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439.l #10 ENSGT01000000215862 #16 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367.g.b #31 ENSGT00940000163367.g.a ##31 ENSGT00940000154526.h.i.b ##32 ENSGT00940000155933.b.a #34 ENSGT00940000155933.b.b ##34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 Golden Hamster MODERN SPECIES 649 Ptchd4 (ENSMAUG00000013409) ENSMAUG00000012583 Mmut (ENSMAUG00000010779) Cenpq (ENSMAUG00000013423) Glyatl3 (ENSMAUG00000013095) 9130008F23Rik (ENSMAUG00000012110) #7 Rhag (ENSMAUG00000010616) #9 Crisp2 (ENSMAUG00000008482) #10 ENSMAUG00000010754 #16 ENSMAUG00000017696 ENSMAUG00000009650 #14 Pgk2 (ENSMAUG00000017658) #15 Crisp4 (ENSMAUG00000007766) #17 Defb41 (ENSMAUG00000005698) #20 Tfap2d (ENSMAUG00000004727) #21 Tfap2b (ENSMAUG00000017922) #22 Pkhd1 (ENSMAUG00000017819) #23 Il17a (ENSMAUG00000014054) #24 Il17f (ENSMAUG00000014457) #25 Mcm3 (ENSMAUG00000012859) #26 Paqr8 (ENSMAUG00000011171) #27 Efhc1 (ENSMAUG00000010139) #28 Tram2 (ENSMAUG00000001094) #29 Tmem14a (ENSMAUG00000014884) #30 Gsta3 (ENSMAUG00000014278) #31 ENSMAUG00000013236 ##31 Kcnq5 (ENSMAUG00000012668) #34 ENSMAUG00000011817 #35 ENSMAUG00000017764 ENSMAUG00000009953 #36 B3gat2 (ENSMAUG00000012703) #37 Chinese hamster chok1gshd MODERN SPECIES 165 Adgrf2 (ENSCGRG00001009019) Adgrf4 (ENSCGRG00001021720) Opn5 (ENSCGRG00001011285) Ptchd4 (ENSCGRG00001003471) Mmut (ENSCGRG00001019456) Cenpq (ENSCGRG00001010699) Glyatl3 (ENSCGRG00001016869) 9130008F23Rik (ENSCGRG00001006784) #7 Rhag (ENSCGRG00001011984) #9 Crisp2 (ENSCGRG00001007053) #10 ENSCGRG00001018785 #16 ENSCGRG00001000239 #14 Pgk2 (ENSCGRG00001002124) #15 Crisp4 (ENSCGRG00001015574) #17 Tfap2d (ENSCGRG00001003273) #21 Tfap2b (ENSCGRG00001014115) #22 Pkhd1 (ENSCGRG00001020061) #23 Il17a (ENSCGRG00001015169) #24 Il17f (ENSCGRG00001020910) #25 Mcm3 (ENSCGRG00001009748) #26 Paqr8 (ENSCGRG00001004665) #27 Efhc1 (ENSCGRG00001022397) #28 Tram2 (ENSCGRG00001015106) #29 Tmem14a (ENSCGRG00001009902) #30 Gsta3 (ENSCGRG00001023755) #31 ENSCGRG00001017591 ##31 ENSCGRG00001021036 ##32 Kcnq5 (ENSCGRG00001009953) #34 ENSCGRG00001017322 ##34 Rims1 (ENSCGRG00001019526) #35 Ogfrl1 (ENSCGRG00001008053) #36 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000163367.h ##31 ENSGT00940000166012 ENSGT00940000158206 #30 ENSGT00940000163367.g.a ##31 ENSGT00940000154526.h.i.b ##32 ENSGT00940000155933.b.a #34 ENSGT00940000155134 #35 ENSGT00390000018730.B #36 Northern American deer mouse MODERN SPECIES 13 ENSPEMG00000027863 #35 ENSPEMG00000031021 #35 Kcnq5 (ENSPEMG00000017858) #34 ENSPEMG00000029990 #10 ENSPEMG00000021612 #14 ENSPEMG00000021831 #11 ENSPEMG00000030274 #11 Crisp2 (ENSPEMG00000022961) #10 Rhag (ENSPEMG00000003150) #9 ENSPEMG00000027470 #8 9130008F23Rik (ENSPEMG00000002757) #7 Glyatl3 (ENSPEMG00000000995) Cenpq (ENSPEMG00000013318) Mmut (ENSPEMG00000009713) Tfap2d (ENSPEMG00000012171) #21 Tfap2b (ENSPEMG00000020723) #22 ENSPEMG00000029888 ENSPEMG00000026183 Pkhd1 (ENSPEMG00000030256) #23 Il17a (ENSPEMG00000020016) #24 Il17f (ENSPEMG00000019678) #25 Mcm3 (ENSPEMG00000019473) #26 Paqr8 (ENSPEMG00000019532) #27 Efhc1 (ENSPEMG00000014331) #28 Tram2 (ENSPEMG00000006945) #29 ENSPEMG00000031008 ##31 ENSPEMG00000027417 Tmem14a (ENSPEMG00000020022) #30 ENSPEMG00000015141 ##31 Gsta3 (ENSPEMG00000002630) #31 ENSPEMG00000023708 ##32 Prairie vole MODERN SPECIES 135 Pgk2 (ENSMOCG00000022317) #15 Crisp4 (ENSMOCG00000001532) #17 Defb41 (ENSMOCG00000014245) #20 Tfap2d (ENSMOCG00000015633) #21 Tfap2b (ENSMOCG00000015002) #22 Pkhd1 (ENSMOCG00000020192) #23 Il17a (ENSMOCG00000000135) #24 Il17f (ENSMOCG00000005401) #25 Mcm3 (ENSMOCG00000006791) #26 Paqr8 (ENSMOCG00000011453) #27 Efhc1 (ENSMOCG00000012258) #28 Tram2 (ENSMOCG00000018961) #29 Upper Galilee mountains blind mole rat MODERN SPECIES 1882 Mmut (ENSNGAG00000012472) Cenpq (ENSNGAG00000006423) Glyatl3 (ENSNGAG00000017110) 9130008F23Rik (ENSNGAG00000014630) #7 Rhag (ENSNGAG00000014043) #9 ENSNGAG00000000227 #10 ENSNGAG00000008808 #14 ENSNGAG00000000270 #15 ENSNGAG00000000040 #17 Defb18 (ENSNGAG00000009235) #19 ENSNGAG00000008579 Tfap2d (ENSNGAG00000020572) #21 Tfap2b (ENSNGAG00000011310) #22 Pkhd1 (ENSNGAG00000009481) #23 Il17a (ENSNGAG00000003868) #24 Il17f (ENSNGAG00000019809) #25 Mcm3 (ENSNGAG00000009877) #26 Paqr8 (ENSNGAG00000019180) #27 Efhc1 (ENSNGAG00000015995) #28 Tram2 (ENSNGAG00000003316) #29 ENSNGAG00000018209 #30 ENSNGAG00000008046 #31 ENSNGAG00000011078 #31 Lesser Egyptian jerboa MODERN SPECIES 41 Nfkbie (ENSJJAG00000021238) Tmem151b (ENSJJAG00000019960) Tcte1 (ENSJJAG00000019641) Aars2 (ENSJJAG00000015691) Paqr8 (ENSJJAG00000002669) #27 Efhc1 (ENSJJAG00000019979) #28 Tram2 (ENSJJAG00000019249) #29 ENSJJAG00000022957 #30 Gsta3 (ENSJJAG00000022357) #31 ENSJJAG00000021834 Crisp2 (ENSJJAG00000018523) #10 Pgk2 (ENSJJAG00000003644) #15 ENSJJAG00000020807 #14 ENSJJAG00000000785 #17 Tfap2d (ENSJJAG00000013114) #21 Tfap2b (ENSJJAG00000018867) #22 Pkhd1 (ENSJJAG00000020101) #23 Il17a (ENSJJAG00000003345) #24 Il17f (ENSJJAG00000020203) #25 Mcm3 (ENSJJAG00000019109) #26 Rhag (ENSJJAG00000017373) #9 Glyatl3 (ENSJJAG00000016081) Cenpq (ENSJJAG00000016270) ENSJJAG00000002394 Mmut (ENSJJAG00000020693) ENSJJAG00000004017 Ptchd4 (ENSJJAG00000012388) Opn5 (ENSJJAG00000023915) Adgrf4 (ENSJJAG00000022843) Adgrf2 (ENSJJAG00000016491) Cd2ap (ENSJJAG00000018750) Kangaroo rat MODERN SPECIES 363 Mep1a (ENSDORG00000002552) Adgrf5 (ENSDORG00000002553) Adgrf1 (ENSDORG00000002560) Tnfrsf21 (ENSDORG00000008533) Cd2ap (ENSDORG00000007826) Adgrf2 (ENSDORG00000007827) Opn5 (ENSDORG00000007833) Ptchd4 (ENSDORG00000014666) Mmut (ENSDORG00000002052) Glyatl3 (ENSDORG00000006589) Rhag (ENSDORG00000024892) #9 ENSDORG00000011413 #10 ENSDORG00000011420 #14 ENSDORG00000028707 Tfap2d (ENSDORG00000003703) #21 Tfap2b (ENSDORG00000025666) #22 Pkhd1 (ENSDORG00000002272) #23 Il17a (ENSDORG00000008932) #24 Il17f (ENSDORG00000006136) #25 Mcm3 (ENSDORG00000006138) #26 Efhc1 (ENSDORG00000006864) #28 Tram2 (ENSDORG00000006868) #29 ENSDORG00000012421 #30 ENSDORG00000014473 ##32 ENSDORG00000029294 ##32 Gsta4 (ENSDORG00000029976) Cilk1 (ENSDORG00000003623) Fbxo9 (ENSDORG00000003625) Gcm1 (ENSDORG00000003627) Elovl5 (ENSDORG00000014395) Gclc (ENSDORG00000026700) Rodentia_A ANCESTRAL SPECIES 8 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Hystricomorpha ANCESTRAL SPECIES 41 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00390000011892 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a.r ##32 ENSGT00940000154526.h.i.a.q ##32 Naked mole-rat female MODERN SPECIES ENSHGLG00000003363 ENSHGLG00000032662 ENSHGLG00000036762 ENSHGLG00000032562 ENSHGLG00000002149 ENSHGLG00000002224 ENSHGLG00000002312 #9 ENSHGLG00000002573 ENSHGLG00000002662 #15 CRISP3 (ENSHGLG00000043304) #14 ENSHGLG00000032826 DEFB110 (ENSHGLG00000004350) #20 ENSHGLG00000020379 ENSHGLG00000032464 TFAP2D (ENSHGLG00000003984) #21 TFAP2B (ENSHGLG00000008303) #22 ENSHGLG00000005244 PKHD1 (ENSHGLG00000018109) #23 ENSHGLG00000021226 IL17A (ENSHGLG00000014659) #24 IL17F (ENSHGLG00000017633) #25 MCM3 (ENSHGLG00000016531) #26 PAQR8 (ENSHGLG00000010601) #27 EFHC1 (ENSHGLG00000009785) #28 ENSHGLG00000009261 #29 ENSHGLG00000047464 ENSHGLG00000035426 #30 GSTA3 (ENSHGLG00000041079) ##32 ENSHGLG00000043320 ##32 ENSHGLG00000007131 ENSHGLG00000048454 Hystricomorpha_a ANCESTRAL SPECIES 46 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00390000011892 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a.r ##32 ENSGT00940000154526.h.i.a.q ##32 Hystricomorpha_b ANCESTRAL SPECIES 41 ENSGT00940000168604 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00390000011892 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.a.r ##32 ENSGT00940000154526.h.i.a.q ##32 ENSGT00950000183181.A.a ENSGT00390000018436.a.b ENSGT00940000157846 ENSGT00390000012017 ENSGT00390000018879 Long-tailed chinchilla MODERN SPECIES 118 ME1 (ENSCLAG00000015383) RWDD2A (ENSCLAG00000013197) PGM3 (ENSCLAG00000011213) DOP1A (ENSCLAG00000011249) UBE3D (ENSCLAG00000010406) IBTK (ENSCLAG00000008463) TENT5A (ENSCLAG00000013935) BCKDHB (ENSCLAG00000013713) MMUT (ENSCLAG00000011186) RHAG (ENSCLAG00000009257) #9 CRISP2 (ENSCLAG00000009665) #10 CRISP3 (ENSCLAG00000010600) #14 DEFB113 (ENSCLAG00000010106) #19 DEFB110 (ENSCLAG00000011894) #20 TFAP2D (ENSCLAG00000012034) #21 TFAP2B (ENSCLAG00000008266) #22 PKHD1 (ENSCLAG00000010173) #23 IL17A (ENSCLAG00000012310) #24 IL17F (ENSCLAG00000011803) #25 MCM3 (ENSCLAG00000015905) #26 PAQR8 (ENSCLAG00000017940) #27 EFHC1 (ENSCLAG00000017038) #28 TRAM2 (ENSCLAG00000012768) #29 TMEM14A (ENSCLAG00000012364) #30 ENSCLAG00000011460 ##32 ENSCLAG00000011232 ##32 ENSCLAG00000015569 ##32 ENSCLAG00000015281 SMOC2 (ENSCLAG00000014318) THBS2 (ENSCLAG00000015165) WDR27 (ENSCLAG00000008515) Degu MODERN SPECIES 63 RWDD2A (ENSODEG00000008183) PGM3 (ENSODEG00000008826) DOP1A (ENSODEG00000010095) ENSODEG00000010311 ENSODEG00000009092 TPBG (ENSODEG00000009537) IBTK (ENSODEG00000010597) TENT5A (ENSODEG00000008776) BCKDHB (ENSODEG00000010271) ENSODEG00000019538 MMUT (ENSODEG00000008529) RHAG (ENSODEG00000010420) #9 CRISP2 (ENSODEG00000009452) #10 TFAP2D (ENSODEG00000009777) #21 ENSODEG00000009809 TFAP2B (ENSODEG00000010145) #22 PKHD1 (ENSODEG00000011040) #23 IL17A (ENSODEG00000010713) #24 IL17F (ENSODEG00000010370) #25 ENSODEG00000009125 #26 PAQR8 (ENSODEG00000008711) #27 EFHC1 (ENSODEG00000010266) #28 TRAM2 (ENSODEG00000008597) #29 TMEM14A (ENSODEG00000009025) #30 ENSODEG00000009677 ##32 DACT2 (ENSODEG00000009034) SMOC2 (ENSODEG00000008584) THBS2 (ENSODEG00000009890) ENSODEG00000010394 ENSODEG00000009298 C6orf120 (ENSODEG00000019614) Guinea pig MODERN SPECIES 12 ME1 (ENSCPOG00000002656) RWDD2A (ENSCPOG00000002653) PGM3 (ENSCPOG00000002649) DOP1A (ENSCPOG00000002636) UBE3D (ENSCPOG00000012708) TPBG (ENSCPOG00000002388) IBTK (ENSCPOG00000010950) TENT5A (ENSCPOG00000033104) BCKDHB (ENSCPOG00000010332) MMUT (ENSCPOG00000014677) RHAG (ENSCPOG00000014678) #9 CRISP2 (ENSCPOG00000011111) #10 DEFB113 (ENSCPOG00000026683) #19 DEFB110 (ENSCPOG00000004557) #20 TFAP2D (ENSCPOG00000026397) #21 TFAP2B (ENSCPOG00000022967) #22 PKHD1 (ENSCPOG00000010473) #23 IL17A (ENSCPOG00000035708) #24 IL17F (ENSCPOG00000012646) #25 MCM3 (ENSCPOG00000000867) #26 PAQR8 (ENSCPOG00000039705) #27 EFHC1 (ENSCPOG00000001955) #28 TRAM2 (ENSCPOG00000034245) #29 TMEM14A (ENSCPOG00000009279) #30 ENSCPOG00000004186 ##32 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Marmotini ANCESTRAL SPECIES 18 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367.c.a #31 ENSGT00940000163367.c.b #31 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Marmotini_b ANCESTRAL SPECIES 8 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00940000162362 #17 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367.c.a #31 ENSGT00940000163367.c.b #31 ENSGT00940000154526.h.i.a ##32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Squirrel MODERN SPECIES 76 ADGRF4 (ENSSTOG00000002876) OPN5 (ENSSTOG00000002889) PTCHD4 (ENSSTOG00000002903) ENSSTOG00000033723 MMUT (ENSSTOG00000001420) CENPQ (ENSSTOG00000001426) GLYATL3 (ENSSTOG00000001428) ENSSTOG00000001431 #7 ENSSTOG00000020139 #8 RHAG (ENSSTOG00000001434) #9 CRISP2 (ENSSTOG00000013131) #10 CRISP3 (ENSSTOG00000033453) #14 CRISP1 (ENSSTOG00000025570) #17 DEFB110 (ENSSTOG00000033113) #20 TFAP2D (ENSSTOG00000011817) #21 TFAP2B (ENSSTOG00000025602) #22 PKHD1 (ENSSTOG00000013374) #23 IL17A (ENSSTOG00000008569) #24 IL17F (ENSSTOG00000002268) #25 MCM3 (ENSSTOG00000001358) #26 PAQR8 (ENSSTOG00000013049) #27 EFHC1 (ENSSTOG00000012272) #28 TRAM2 (ENSSTOG00000013535) #29 TMEM14A (ENSSTOG00000034800) #30 ENSSTOG00000028449 #31 ENSSTOG00000028252 #31 ENSSTOG00000020625 #31 ENSSTOG00000003609 ##32 ENSSTOG00000019919 GSTA4 (ENSSTOG00000012502) CILK1 (ENSSTOG00000012510) Arctic ground squirrel MODERN SPECIES 237 CRISP1 (ENSUPAG00010018274) #17 ENSUPAG00010018290 TFAP2D (ENSUPAG00010018299) #21 TFAP2B (ENSUPAG00010018310) #22 PKHD1 (ENSUPAG00010018346) #23 IL17A (ENSUPAG00010018457) #24 IL17F (ENSUPAG00010018464) #25 MCM3 (ENSUPAG00010018473) #26 PAQR8 (ENSUPAG00010018506) #27 EFHC1 (ENSUPAG00010018516) #28 TRAM2 (ENSUPAG00010018531) #29 ENSUPAG00010018545 TMEM14A (ENSUPAG00010018549) #30 ENSUPAG00010018562 ENSUPAG00010018624 #31 ENSUPAG00010018634 #31 Alpin marmot MODERN SPECIES 20 ENSMMMG00000024610 MMUT (ENSMMMG00000024611) ENSMMMG00000024612 GLYATL3 (ENSMMMG00000024613) ENSMMMG00000024614 #7 ENSMMMG00000024615 #8 RHAG (ENSMMMG00000024616) #9 ENSMMMG00000024617 CRISP2 (ENSMMMG00000024618) #10 CRISP3 (ENSMMMG00000024619) #14 ENSMMMG00000024620 #15 ENSMMMG00000024621 #15 CRISP1 (ENSMMMG00000024622) #17 DEFB114 (ENSMMMG00000024623) ENSMMMG00000024624 TFAP2B (ENSMMMG00000024628) #22 PKHD1 (ENSMMMG00000024629) #23 IL17A (ENSMMMG00000024632) #24 IL17F (ENSMMMG00000024633) #25 MCM3 (ENSMMMG00000024634) #26 ENSMMMG00000024635 PAQR8 (ENSMMMG00000024636) #27 EFHC1 (ENSMMMG00000024637) #28 TRAM2 (ENSMMMG00000024638) #29 TMEM14A (ENSMMMG00000000009) #30 ENSMMMG00000000069 #31 ENSMMMG00000000189 #31 ENSMMMG00000000204 ##32 GSTA4 (ENSMMMG00000000272) CILK1 (ENSMMMG00000000307) ENSMMMG00000000398 Eurasian red squirrel MODERN SPECIES 16 CENPQ (ENSSVLG00005011381) GLYATL3 (ENSSVLG00005011315) C6orf141 (ENSSVLG00005011288) #7 RHAG (ENSSVLG00005011002) #9 ENSSVLG00005010899 CRISP2 (ENSSVLG00005010832) #10 ENSSVLG00005010778 #15 CRISP3 (ENSSVLG00005010598) #14 ENSSVLG00005010570 #15 ENSSVLG00005010557 #15 CRISP1 (ENSSVLG00005010451) #17 ENSSVLG00005010409 DEFB113 (ENSSVLG00005010331) #19 DEFB110 (ENSSVLG00005010300) #20 TFAP2D (ENSSVLG00005010245) #21 TFAP2B (ENSSVLG00005010190) #22 ENSSVLG00005010145 PKHD1 (ENSSVLG00005009423) #23 IL17A (ENSSVLG00005009355) #24 IL17F (ENSSVLG00005009322) #25 MCM3 (ENSSVLG00005009178) #26 ENSSVLG00005009141 EFHC1 (ENSSVLG00005008978) #28 TRAM2 (ENSSVLG00005008921) #29 ENSSVLG00005008875 ENSSVLG00005008845 #31 ENSSVLG00005008800 #31 TMEM14A (ENSSVLG00005008760) #30 ENSSVLG00005008692 GSTA3 (ENSSVLG00005008617) ENSSVLG00005008575 Lagomorpha ANCESTRAL SPECIES 2 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h.i.b ##32 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Pika MODERN SPECIES 3999 ENSOPRG00000010228 #21 TFAP2B (ENSOPRG00000010247) #22 Rabbit MODERN SPECIES 3 GLYATL3 (ENSOCUG00000006111) ENSOCUG00000033788 #7 ENSOCUG00000033551 #8 RHAG (ENSOCUG00000016186) #9 CRISP2 (ENSOCUG00000022149) #10 CRISP3 (ENSOCUG00000012801) #14 CRISP1 (ENSOCUG00000025156) #17 ENSOCUG00000035733 ENSOCUG00000032803 ENSOCUG00000039348 DEFB114 (ENSOCUG00000032209) DEFB113 (ENSOCUG00000022579) #19 ENSOCUG00000024437 DEFB110 (ENSOCUG00000015973) #20 TFAP2D (ENSOCUG00000025550) #21 TFAP2B (ENSOCUG00000025542) #22 PKHD1 (ENSOCUG00000004246) #23 IL17A (ENSOCUG00000004270) #24 MCM3 (ENSOCUG00000004273) #26 IL17F (ENSOCUG00000004271) #25 PAQR8 (ENSOCUG00000003946) #27 EFHC1 (ENSOCUG00000012087) #28 TRAM2 (ENSOCUG00000012094) #29 ENSOCUG00000012895 ##32 ENSOCUG00000038012 ENSOCUG00000012902 #31 GSTA5 (ENSOCUG00000029486) #31 ENSOCUG00000034994 GSTA4 (ENSOCUG00000003680) CILK1 (ENSOCUG00000027465) FBXO9 (ENSOCUG00000011388) Tree shrew MODERN SPECIES 5787 TFAP2D (ENSTBEG00000015689) #21 ENSTBEG00000015878 #22 Primates ANCESTRAL SPECIES 5 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h.e.a #32 ENSGT00940000163367 #31 ENSGT00940000154526.h.e.b #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00910000147043 ENSGT00900000143290 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h.e.a #32 ENSGT00940000163367 #31 ENSGT00940000154526.h.e.b #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Mouse lemur MODERN SPECIES 28 ENSMICG00000036368 ENSMICG00000032805 MMUT (ENSMICG00000008076) CENPQ (ENSMICG00000042405) GLYATL3 (ENSMICG00000002636) ENSMICG00000046680 RHAG (ENSMICG00000008366) #9 CRISP2 (ENSMICG00000014964) #10 CRISP3 (ENSMICG00000002617) #14 CRISP1 (ENSMICG00000002786) #17 DEFB114 (ENSMICG00000044264) DEFB113 (ENSMICG00000032756) #19 DEFB110 (ENSMICG00000047331) #20 ENSMICG00000047064 TFAP2D (ENSMICG00000005507) #21 TFAP2B (ENSMICG00000017317) #22 PKHD1 (ENSMICG00000008392) #23 IL17A (ENSMICG00000043002) #24 IL17F (ENSMICG00000026740) #25 MCM3 (ENSMICG00000011430) #26 PAQR8 (ENSMICG00000044671) #27 EFHC1 (ENSMICG00000004321) #28 TRAM2 (ENSMICG00000032391) #29 ENSMICG00000042743 #30 ENSMICG00000026922 #32 ENSMICG00000001561 #32 ENSMICG00000041824 #32 ENSMICG00000029781 GSTA4 (ENSMICG00000005858) CILK1 (ENSMICG00000038462) FBXO9 (ENSMICG00000008924) Lemuriformes_a ANCESTRAL SPECIES 4 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h.e.a #32 ENSGT00940000163367 #31 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Greater bamboo lemur MODERN SPECIES 655 MMUT (ENSPSMG00000015693) CENPQ (ENSPSMG00000015727) GLYATL3 (ENSPSMG00000015729) C6orf141 (ENSPSMG00000015737) #7 ENSPSMG00000015759 #8 RHAG (ENSPSMG00000015777) #9 ENSPSMG00000015791 CRISP2 (ENSPSMG00000015837) #10 CRISP3 (ENSPSMG00000015857) #14 PGK2 (ENSPSMG00000015865) #15 CRISP1 (ENSPSMG00000015890) #17 DEFB114 (ENSPSMG00000015897) DEFB113 (ENSPSMG00000015905) #19 ENSPSMG00000015914 TFAP2D (ENSPSMG00000015932) #21 TFAP2B (ENSPSMG00000015936) #22 PKHD1 (ENSPSMG00000016108) #23 IL17A (ENSPSMG00000016139) #24 IL17F (ENSPSMG00000016144) #25 MCM3 (ENSPSMG00000016201) #26 PAQR8 (ENSPSMG00000016211) #27 EFHC1 (ENSPSMG00000016338) #28 TRAM2 (ENSPSMG00000016397) #29 TMEM14A (ENSPSMG00000016417) #30 ENSPSMG00000016464 ENSPSMG00000016475 #31 ENSPSMG00000016493 #32 Coquerels sifaka MODERN SPECIES 412 GTF2E2 (ENSPCOG00000019618) GSR (ENSPCOG00000026003) UBXN8 (ENSPCOG00000015515) PPP2CB (ENSPCOG00000014536) TEX15 (ENSPCOG00000023764) PURG (ENSPCOG00000005104) WRN (ENSPCOG00000012938) NRG1 (ENSPCOG00000015684) FUT10 (ENSPCOG00000025506) ENSPCOG00000018065 TTI2 (ENSPCOG00000018445) RNF122 (ENSPCOG00000018082) DUSP26 (ENSPCOG00000023702) ENSPCOG00000019467 TFAP2D (ENSPCOG00000023340) #21 TFAP2B (ENSPCOG00000019712) #22 PKHD1 (ENSPCOG00000025913) #23 IL17A (ENSPCOG00000021965) #24 ENSPCOG00000015611 IL17F (ENSPCOG00000018992) #25 MCM3 (ENSPCOG00000014588) #26 PAQR8 (ENSPCOG00000013953) #27 EFHC1 (ENSPCOG00000026614) #28 TRAM2 (ENSPCOG00000020466) #29 TMEM14A (ENSPCOG00000019026) #30 ENSPCOG00000027305 #32 ENSPCOG00000018411 #32 GSTA5 (ENSPCOG00000020631) #31 ENSPCOG00000017536 GSTA4 (ENSPCOG00000024795) CILK1 (ENSPCOG00000025293) Bushbaby MODERN SPECIES 384 PGK2 (ENSOGAG00000016635) #15 CRISP1 (ENSOGAG00000016638) #17 DEFB110 (ENSOGAG00000016643) #20 ENSOGAG00000016646 TFAP2D (ENSOGAG00000000700) #21 TFAP2B (ENSOGAG00000000701) #22 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 Tarsier MODERN SPECIES 3926 TFAP2D (ENSTSYG00000001866) #21 TFAP2B (ENSTSYG00000013694) #22 Simiiformes ANCESTRAL SPECIES 5 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Catarrhini ANCESTRAL SPECIES 5 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000164034.b ENSGT00940000164034.a Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 Rhinopithecus ANCESTRAL SPECIES 86 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00950000182844.b.a #9 ENSGT00940000153232.a.b.k.a ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00910000144211.n.a ENSGT00940000161211 ENSGT00390000004385 ENSGT00390000017600 ENSGT00730000111317.c ENSGT00940000158167 ENSGT01030000234510.a.a.a.a.a.b ENSGT00390000015066.d Golden snub-nosed monkey MODERN SPECIES 617 TFAP2D (ENSRROG00000043555) #21 ENSRROG00000014074 TFAP2B (ENSRROG00000036382) #22 PKHD1 (ENSRROG00000035962) #23 IL17A (ENSRROG00000040427) #24 ENSRROG00000043580 IL17F (ENSRROG00000010614) #25 ENSRROG00000040384 MCM3 (ENSRROG00000045226) #26 PAQR8 (ENSRROG00000006635) #27 ENSRROG00000039209 ENSRROG00000023565 EFHC1 (ENSRROG00000022951) #28 TRAM2 (ENSRROG00000036043) #29 ENSRROG00000030207 TMEM14A (ENSRROG00000041634) #30 ENSRROG00000041870 GSTA1 (ENSRROG00000044471) Black snub-nosed monkey MODERN SPECIES 1471 DEFB114 (ENSRBIG00000042286) DEFB113 (ENSRBIG00000038298) #19 DEFB110 (ENSRBIG00000030990) #20 DEFB112 (ENSRBIG00000006289) ENSRBIG00000027571 TFAP2D (ENSRBIG00000027596) #21 TFAP2B (ENSRBIG00000040359) #22 PKHD1 (ENSRBIG00000044462) #23 IL17A (ENSRBIG00000044223) #24 ENSRBIG00000033175 IL17F (ENSRBIG00000036495) #25 ENSRBIG00000027505 MCM3 (ENSRBIG00000036354) #26 PAQR8 (ENSRBIG00000031177) #27 ENSRBIG00000032677 ENSRBIG00000021464 EFHC1 (ENSRBIG00000040029) #28 TRAM2 (ENSRBIG00000042642) #29 ENSRBIG00000042424 TMEM14A (ENSRBIG00000030712) #30 LARS2 (ENSRBIG00000038739) Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 Vervet Monkey MODERN SPECIES 8 PTCHD4 (ENSCSAG00000012696) MMUT (ENSCSAG00000012707) CENPQ (ENSCSAG00000012726) GLYATL3 (ENSCSAG00000012740) C6orf141 (ENSCSAG00000019297) #7 RHAG (ENSCSAG00000012820) #9 CRISP2 (ENSCSAG00000012852) #10 CRISP3 (ENSCSAG00000012862) #14 PGK2 (ENSCSAG00000019296) #15 CRISP1 (ENSCSAG00000012884) #17 ENSCSAG00000019295 #18 DEFB114 (ENSCSAG00000012897) DEFB113 (ENSCSAG00000012901) #19 DEFB110 (ENSCSAG00000012904) #20 TFAP2D (ENSCSAG00000012915) #21 TFAP2B (ENSCSAG00000012975) #22 PKHD1 (ENSCSAG00000013005) #23 ENSCSAG00000013016 IL17A (ENSCSAG00000013028) #24 IL17F (ENSCSAG00000013043) #25 MCM3 (ENSCSAG00000013052) #26 PAQR8 (ENSCSAG00000019294) #27 EFHC1 (ENSCSAG00000013059) #28 TRAM2 (ENSCSAG00000013065) #29 TMEM14A (ENSCSAG00000013069) #30 GSTA1 (ENSCSAG00000013074) GSTA5 (ENSCSAG00000013097) #31 GSTA2 (ENSCSAG00000013108) ENSCSAG00000013119 GSTA4 (ENSCSAG00000013126) CILK1 (ENSCSAG00000013132) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000153232.a.b.m.b.a ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 ENSGT00940000164319 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000153232.a.b.m.b.a ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 ENSGT00940000164319 Olive baboon MODERN SPECIES 16 MMUT (ENSPANG00000013802) CENPQ (ENSPANG00000009023) GLYATL3 (ENSPANG00000039098) C6orf141 (ENSPANG00000043528) #7 RHAG (ENSPANG00000006260) #9 ENSPANG00000036186 CRISP2 (ENSPANG00000020813) #10 PGK2 (ENSPANG00000003184) #15 CRISP1 (ENSPANG00000005250) #17 ENSPANG00000008642 DEFB114 (ENSPANG00000009022) DEFB113 (ENSPANG00000015184) #19 DEFB110 (ENSPANG00000006857) #20 DEFB112 (ENSPANG00000050890) TFAP2D (ENSPANG00000017493) #21 TFAP2B (ENSPANG00000026000) #22 PKHD1 (ENSPANG00000020811) #23 ENSPANG00000024397 IL17A (ENSPANG00000043854) #24 IL17F (ENSPANG00000011221) #25 MCM3 (ENSPANG00000017188) #26 PAQR8 (ENSPANG00000005625) #27 EFHC1 (ENSPANG00000020492) #28 TRAM2 (ENSPANG00000005247) #29 TMEM14A (ENSPANG00000045952) #30 GSTA3 (ENSPANG00000017005) GSTA1 (ENSPANG00000046442) GSTA4 (ENSPANG00000007356) CILK1 (ENSPANG00000016921) FBXO9 (ENSPANG00000015587) GCM1 (ENSPANG00000037213) Cercopithecinae_d ANCESTRAL SPECIES 13 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00950000182844.b.a #9 ENSGT00940000153232.a.b.m.b.a ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT00940000157863.h ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 ENSGT00940000164319 Sooty mangabey MODERN SPECIES 97 CENPQ (ENSCATG00000010208) GLYATL3 (ENSCATG00000041246) RHAG (ENSCATG00000043058) #9 ENSCATG00000041911 CRISP2 (ENSCATG00000031597) #10 CRISP3 (ENSCATG00000039496) #14 PGK2 (ENSCATG00000021299) #15 CRISP1 (ENSCATG00000039100) #17 ENSCATG00000038484 DEFB114 (ENSCATG00000033669) DEFB113 (ENSCATG00000031427) #19 DEFB110 (ENSCATG00000038500) #20 DEFB112 (ENSCATG00000031101) ENSCATG00000040634 TFAP2D (ENSCATG00000031294) #21 TFAP2B (ENSCATG00000033725) #22 PKHD1 (ENSCATG00000039572) #23 IL17A (ENSCATG00000036902) #24 ENSCATG00000035212 IL17F (ENSCATG00000041329) #25 MCM3 (ENSCATG00000031333) #26 PAQR8 (ENSCATG00000020608) #27 ENSCATG00000021876 EFHC1 (ENSCATG00000038309) #28 TRAM2 (ENSCATG00000029584) #29 TMEM14A (ENSCATG00000043586) #30 GSTA2 (ENSCATG00000033148) ENSCATG00000040439 GSTA4 (ENSCATG00000027052) CILK1 (ENSCATG00000041316) FBXO9 (ENSCATG00000019206) Drill MODERN SPECIES 174 ENSMLEG00000030708 TFAP2D (ENSMLEG00000041732) #21 TFAP2B (ENSMLEG00000038170) #22 ENSMLEG00000016267 Macaca ANCESTRAL SPECIES 9 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000153232.a.b.n ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Pig-tailed macaque MODERN SPECIES 174 CENPQ (ENSMNEG00000043083) GLYATL3 (ENSMNEG00000040508) RHAG (ENSMNEG00000030983) #9 ENSMNEG00000043727 CRISP2 (ENSMNEG00000030642) #10 CRISP3 (ENSMNEG00000035624) #14 PGK2 (ENSMNEG00000038249) #15 CRISP1 (ENSMNEG00000040906) #17 DEFB114 (ENSMNEG00000028375) DEFB113 (ENSMNEG00000035185) #19 DEFB110 (ENSMNEG00000042902) #20 DEFB112 (ENSMNEG00000036563) ENSMNEG00000044311 TFAP2D (ENSMNEG00000039212) #21 ENSMNEG00000011383 TFAP2B (ENSMNEG00000044465) #22 PKHD1 (ENSMNEG00000037126) #23 IL17A (ENSMNEG00000041013) #24 ENSMNEG00000033057 IL17F (ENSMNEG00000038791) #25 MCM3 (ENSMNEG00000035280) #26 PAQR8 (ENSMNEG00000011526) #27 ENSMNEG00000007313 EFHC1 (ENSMNEG00000041404) #28 TRAM2 (ENSMNEG00000032001) #29 TMEM14A (ENSMNEG00000035396) #30 GSTA3 (ENSMNEG00000037930) ENSMNEG00000034303 GSTA4 (ENSMNEG00000018065) CILK1 (ENSMNEG00000032820) FBXO9 (ENSMNEG00000041281) Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164319 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00390000011908 Rhesus MODERN SPECIES 14 CENPQ (ENSMMUG00000048193) GLYATL3 (ENSMMUG00000046051) C4H6orf141 (ENSMMUG00000039015) #7 RHAG (ENSMMUG00000012079) #9 ENSMMUG00000046373 ENSMMUG00000029619 ENSMMUG00000054154 CRISP3 (ENSMMUG00000019818) #14 PGK2 (ENSMMUG00000011998) #15 CRISP1 (ENSMMUG00000004190) #17 DEFB114 (ENSMMUG00000004191) DEFB113 (ENSMMUG00000029617) #19 DEFB110 (ENSMMUG00000029616) #20 DEFB112 (ENSMMUG00000038276) TFAP2D (ENSMMUG00000002867) #21 TFAP2B (ENSMMUG00000002869) #22 PKHD1 (ENSMMUG00000016993) #23 IL17A (ENSMMUG00000007403) #24 IL17F (ENSMMUG00000006691) #25 MCM3 (ENSMMUG00000021149) #26 PAQR8 (ENSMMUG00000052626) #27 EFHC1 (ENSMMUG00000013716) #28 TRAM2 (ENSMMUG00000013718) #29 TMEM14A (ENSMMUG00000060163) #30 GSTA2 (ENSMMUG00000017137) GSTA4 (ENSMMUG00000014899) ENSMMUG00000058208 CILK1 (ENSMMUG00000005344) FBXO9 (ENSMMUG00000005340) GCM1 (ENSMMUG00000022083) ELOVL5 (ENSMMUG00000006422) Crab-eating macaque MODERN SPECIES 14 MMUT (ENSMFAG00000046407) CENPQ (ENSMFAG00000045783) GLYATL3 (ENSMFAG00000000593) C6orf141 (ENSMFAG00000063757) #7 RHAG (ENSMFAG00000042670) #9 ENSMFAG00000043215 CRISP2 (ENSMFAG00000037005) #10 CRISP3 (ENSMFAG00000037975) #14 PGK2 (ENSMFAG00000007944) #15 CRISP1 (ENSMFAG00000035443) #17 DEFB114 (ENSMFAG00000039532) DEFB113 (ENSMFAG00000052987) #19 DEFB110 (ENSMFAG00000045112) #20 DEFB112 (ENSMFAG00000035902) TFAP2D (ENSMFAG00000040653) #21 TFAP2B (ENSMFAG00000046210) #22 PKHD1 (ENSMFAG00000031421) #23 IL17A (ENSMFAG00000059281) #24 IL17F (ENSMFAG00000044851) #25 MCM3 (ENSMFAG00000001888) #26 PAQR8 (ENSMFAG00000004629) #27 EFHC1 (ENSMFAG00000036082) #28 TRAM2 (ENSMFAG00000042433) #29 ENSMFAG00000059971 PTP4A1 (ENSMFAG00000046284) PHF3 (ENSMFAG00000046395) ENSMFAG00000064522 ENSMFAG00000064767 EYS (ENSMFAG00000032080) ENSMFAG00000052667 ADGRB3 (ENSMFAG00000003819) Hominoidea ANCESTRAL SPECIES 4 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 Gibbon MODERN SPECIES 14 PTCHD4 (ENSNLEG00000004199) ENSNLEG00000036272 MMUT (ENSNLEG00000004175) CENPQ (ENSNLEG00000035124) GLYATL3 (ENSNLEG00000031402) RHAG (ENSNLEG00000004130) #9 CRISP2 (ENSNLEG00000004061) #10 CRISP3 (ENSNLEG00000004028) #14 PGK2 (ENSNLEG00000018744) #15 CRISP1 (ENSNLEG00000003999) #17 ENSNLEG00000003997 DEFB110 (ENSNLEG00000003996) #20 ENSNLEG00000029907 TFAP2D (ENSNLEG00000003990) #21 ENSNLEG00000029633 TFAP2B (ENSNLEG00000003972) #22 ENSNLEG00000031575 ENSNLEG00000032903 PKHD1 (ENSNLEG00000003892) #23 IL17A (ENSNLEG00000003884) #24 ENSNLEG00000034287 IL17F (ENSNLEG00000003875) #25 MCM3 (ENSNLEG00000003799) #26 PAQR8 (ENSNLEG00000028996) #27 EFHC1 (ENSNLEG00000003764) #28 TRAM2 (ENSNLEG00000003748) #29 TMEM14A (ENSNLEG00000027983) #30 GSTA1 (ENSNLEG00000003684) GSTA5 (ENSNLEG00000027295) #31 GSTA3 (ENSNLEG00000003666) GSTA4 (ENSNLEG00000003648) Hominidae ANCESTRAL SPECIES 5 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000164034.b ENSGT00940000164034.a ENSGT00940000163367 #31 Orangutan MODERN SPECIES 19 MMUT (ENSPPYG00000016685) CENPQ (ENSPPYG00000016686) GLYATL3 (ENSPPYG00000016687) C6orf141 (ENSPPYG00000016688) #7 RHAG (ENSPPYG00000016689) #9 CRISP2 (ENSPPYG00000016690) #10 CRISP3 (ENSPPYG00000016691) #14 PGK2 (ENSPPYG00000016692) #15 CRISP1 (ENSPPYG00000016693) #17 ENSPPYG00000016694 DEFB114 (ENSPPYG00000016695) DEFB113 (ENSPPYG00000016696) #19 ENSPPYG00000016697 ENSPPYG00000016698 TFAP2D (ENSPPYG00000016699) #21 TFAP2B (ENSPPYG00000034593) #22 ENSPPYG00000033183 PKHD1 (ENSPPYG00000016702) #23 IL17A (ENSPPYG00000016703) #24 IL17F (ENSPPYG00000016704) #25 MCM3 (ENSPPYG00000016705) #26 EFHC1 (ENSPPYG00000016707) #28 ENSPPYG00000039550 TRAM2 (ENSPPYG00000016708) #29 TMEM14A (ENSPPYG00000030434) #30 ENSPPYG00000038815 GSTA3 (ENSPPYG00000016714) GSTA4 (ENSPPYG00000016715) CILK1 (ENSPPYG00000016716) FBXO9 (ENSPPYG00000016718) GCM1 (ENSPPYG00000016719) Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000147663 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a.a ENSGT00940000163367 #31 ENSGT00940000164034.a.b ENSGT00940000164319 Gorilla MODERN SPECIES 19 MMUT (ENSGGOG00000009287) CENPQ (ENSGGOG00000024998) GLYATL3 (ENSGGOG00000016677) C6orf141 (ENSGGOG00000000631) #7 RHAG (ENSGGOG00000012398) #9 CRISP2 (ENSGGOG00000024118) #10 CRISP3 (ENSGGOG00000010906) #14 PGK2 (ENSGGOG00000026767) #15 CRISP1 (ENSGGOG00000010522) #17 ENSGGOG00000022278 ENSGGOG00000025750 #19 DEFB110 (ENSGGOG00000001322) #20 ENSGGOG00000025282 ENSGGOG00000043782 TFAP2D (ENSGGOG00000003510) #21 TFAP2B (ENSGGOG00000014613) #22 ENSGGOG00000041412 ENSGGOG00000041406 PKHD1 (ENSGGOG00000010943) #23 IL17A (ENSGGOG00000009736) #24 ENSGGOG00000039441 IL17F (ENSGGOG00000005003) #25 MCM3 (ENSGGOG00000005009) #26 PAQR8 (ENSGGOG00000038667) #27 EFHC1 (ENSGGOG00000023504) #28 ENSGGOG00000039603 TRAM2 (ENSGGOG00000011922) #29 TMEM14A (ENSGGOG00000000773) #30 GSTA2 (ENSGGOG00000026997) GSTA5 (ENSGGOG00000027587) #31 ENSGGOG00000024635 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a.a ENSGT00940000163367 #31 ENSGT00940000164034.a.b ENSGT00940000164319 ENSGT00940000162778 Human MODERN SPECIES 18 PTCHD4 (ENSG00000244694) MMUT (ENSG00000146085) CENPQ (ENSG00000031691) GLYATL3 (ENSG00000203972) C6orf141 (ENSG00000197261) #7 RHAG (ENSG00000112077) #9 CRISP2 (ENSG00000124490) #10 CRISP3 (ENSG00000096006) #14 PGK2 (ENSG00000170950) #15 CRISP1 (ENSG00000124812) #17 DEFB114 (ENSG00000177684) DEFB113 (ENSG00000214642) #19 DEFB110 (ENSG00000203970) #20 DEFB112 (ENSG00000180872) TFAP2D (ENSG00000008197) #21 TFAP2B (ENSG00000008196) #22 PKHD1 (ENSG00000170927) #23 IL17A (ENSG00000112115) #24 IL17F (ENSG00000112116) #25 MCM3 (ENSG00000112118) #26 PAQR8 (ENSG00000170915) #27 EFHC1 (ENSG00000096093) #28 TRAM2 (ENSG00000065308) #29 TMEM14A (ENSG00000096092) #30 GSTA2 (ENSG00000244067) GSTA1 (ENSG00000243955) GSTA5 (ENSG00000182793) #31 GSTA3 (ENSG00000174156) GSTA4 (ENSG00000170899) CILK1 (ENSG00000112144) ENSG00000288614 Pan ANCESTRAL SPECIES 5 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00390000006548.b.j.b.d ENSGT00390000013931.a.a ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00910000147062 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00910000148681 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034.b ENSGT00940000164034.a.a Chimpanzee MODERN SPECIES 19 MMUT (ENSPTRG00000018256) CENPQ (ENSPTRG00000018257) GLYATL3 (ENSPTRG00000029617) C6H6orf141 (ENSPTRG00000018259) #7 RHAG (ENSPTRG00000018261) #9 CRISP2 (ENSPTRG00000018262) #10 PGK2 (ENSPTRG00000018264) #15 CRISP1 (ENSPTRG00000018265) #17 DEFB133 (ENSPTRG00000032458) DEFB114 (ENSPTRG00000018266) DEFB113 (ENSPTRG00000032456) #19 DEFB110 (ENSPTRG00000029615) #20 DEFB112 (ENSPTRG00000018267) ENSPTRG00000052375 TFAP2D (ENSPTRG00000018268) #21 TFAP2B (ENSPTRG00000018269) #22 ENSPTRG00000043674 ENSPTRG00000007377 ENSPTRG00000051627 PKHD1 (ENSPTRG00000018272) #23 IL17A (ENSPTRG00000018273) #24 ENSPTRG00000052866 IL17F (ENSPTRG00000018274) #25 MCM3 (ENSPTRG00000018275) #26 PAQR8 (ENSPTRG00000047053) #27 EFHC1 (ENSPTRG00000018277) #28 ENSPTRG00000044462 TRAM2 (ENSPTRG00000040958) #29 TMEM14A (ENSPTRG00000018279) #30 GSTA2 (ENSPTRG00000032454) GSTA1 (ENSPTRG00000018280) Bonobo MODERN SPECIES 19 ENSPPAG00000007933 ENSPPAG00000042078 MMUT (ENSPPAG00000034648) CENPQ (ENSPPAG00000038636) GLYATL3 (ENSPPAG00000036205) C6orf141 (ENSPPAG00000025064) #7 RHAG (ENSPPAG00000034078) #9 CRISP2 (ENSPPAG00000014874) #10 CRISP3 (ENSPPAG00000041881) #14 PGK2 (ENSPPAG00000005435) #15 CRISP1 (ENSPPAG00000029268) #17 DEFB114 (ENSPPAG00000030543) DEFB110 (ENSPPAG00000042577) #20 ENSPPAG00000036979 TFAP2D (ENSPPAG00000038341) #21 TFAP2B (ENSPPAG00000031196) #22 ENSPPAG00000027898 PKHD1 (ENSPPAG00000040343) #23 IL17A (ENSPPAG00000028707) #24 ENSPPAG00000007695 IL17F (ENSPPAG00000039561) #25 MCM3 (ENSPPAG00000028475) #26 PAQR8 (ENSPPAG00000026339) #27 EFHC1 (ENSPPAG00000009640) #28 ENSPPAG00000043386 TRAM2 (ENSPPAG00000010782) #29 TMEM14A (ENSPPAG00000035341) #30 GSTA2 (ENSPPAG00000034591) GSTA5 (ENSPPAG00000039462) #31 ENSPPAG00000008098 GSTA3 (ENSPPAG00000033156) Platyrrhini ANCESTRAL SPECIES 2 ENSGT00390000011892 ENSGT00390000005599.c ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B.gb #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034 ENSGT00940000164319.a.a ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Mas night monkey MODERN SPECIES 993 PTCHD4 (ENSANAG00000030161) MMUT (ENSANAG00000025618) ENSANAG00000035608 GLYATL3 (ENSANAG00000030259) RHAG (ENSANAG00000024380) #9 CRISP2 (ENSANAG00000022988) #10 CRISP3 (ENSANAG00000035593) #14 PGK2 (ENSANAG00000011649) #15 CRISP1 (ENSANAG00000033292) #17 ENSANAG00000030784 DEFB114 (ENSANAG00000028900) DEFB113 (ENSANAG00000028898) #19 DEFB110 (ENSANAG00000027463) #20 DEFB112 (ENSANAG00000036019) TFAP2D (ENSANAG00000026393) #21 TFAP2B (ENSANAG00000019812) #22 PKHD1 (ENSANAG00000022549) #23 IL17A (ENSANAG00000036235) #24 IL17F (ENSANAG00000036118) #25 MCM3 (ENSANAG00000024257) #26 PAQR8 (ENSANAG00000003283) #27 ENSANAG00000030513 EFHC1 (ENSANAG00000032647) #28 TRAM2 (ENSANAG00000024793) #29 ENSANAG00000030800 TMEM14A (ENSANAG00000021933) #30 ENSANAG00000016846 ENSANAG00000037760 ENSANAG00000014954 GSTA4 (ENSANAG00000037353) CILK1 (ENSANAG00000018446) Cebidae ANCESTRAL SPECIES 5 ENSGT00390000011892 ENSGT00390000005599.c ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B.gb #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000164034 ENSGT00940000164319.a.a ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Cebidae_a ANCESTRAL SPECIES 25 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599.c ENSGT00950000183133.f ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B.gb #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000163367 #31 ENSGT00940000164319.a.b ENSGT00940000164319.a.a ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Bolivian squirrel monkey MODERN SPECIES 49 ENSSBOG00000030683 MMUT (ENSSBOG00000023914) CENPQ (ENSSBOG00000007847) GLYATL3 (ENSSBOG00000035954) RHAG (ENSSBOG00000019628) #9 CRISP2 (ENSSBOG00000012807) #10 CRISP3 (ENSSBOG00000026829) #14 PGK2 (ENSSBOG00000018220) #15 CRISP1 (ENSSBOG00000031933) #17 ENSSBOG00000025633 DEFB114 (ENSSBOG00000036180) DEFB113 (ENSSBOG00000035856) #19 DEFB110 (ENSSBOG00000019583) #20 DEFB112 (ENSSBOG00000031354) TFAP2D (ENSSBOG00000033191) #21 TFAP2B (ENSSBOG00000021734) #22 ENSSBOG00000033280 PKHD1 (ENSSBOG00000026830) #23 IL17A (ENSSBOG00000031117) #24 IL17F (ENSSBOG00000022387) #25 MCM3 (ENSSBOG00000019946) #26 PAQR8 (ENSSBOG00000008561) #27 EFHC1 (ENSSBOG00000023512) #28 TRAM2 (ENSSBOG00000033153) #29 HLA-DMB (ENSSBOG00000028499) HLA-DMA (ENSSBOG00000020585) ENSSBOG00000034712 ENSSBOG00000033070 HLA-DOA (ENSSBOG00000022957) HLA-DPA1 (ENSSBOG00000026139) HLA-DPB1 (ENSSBOG00000023374) Capuchin MODERN SPECIES 248 SMAD6 (ENSCCAG00000026913) LCTL (ENSCCAG00000000633) ZWILCH (ENSCCAG00000027333) ENSCCAG00000022533 SNAPC5 (ENSCCAG00000020529) MAP2K1 (ENSCCAG00000024279) RHAG (ENSCCAG00000027136) #9 CRISP2 (ENSCCAG00000035454) #10 CRISP3 (ENSCCAG00000027207) #14 PGK2 (ENSCCAG00000004646) #15 CRISP1 (ENSCCAG00000024689) #17 DEFB114 (ENSCCAG00000027397) DEFB113 (ENSCCAG00000014271) #19 DEFB110 (ENSCCAG00000030485) #20 TFAP2D (ENSCCAG00000027869) #21 TFAP2B (ENSCCAG00000036297) #22 PKHD1 (ENSCCAG00000004027) #23 IL17A (ENSCCAG00000021789) #24 Marmoset MODERN SPECIES 16 MMUT (ENSCJAG00000011774) CENPQ (ENSCJAG00000011759) GLYATL3 (ENSCJAG00000083861) C6orf141 (ENSCJAG00000075192) #7 RHAG (ENSCJAG00000011684) #9 CRISP2 (ENSCJAG00000047298) #10 PGK2 (ENSCJAG00000022394) #15 CRISP1 (ENSCJAG00000011614) #17 ENSCJAG00000011612 DEFB114 (ENSCJAG00000011608) DEFB113 (ENSCJAG00000011605) #19 DEFB110 (ENSCJAG00000076216) #20 DEFB112 (ENSCJAG00000052292) ENSCJAG00000083090 TFAP2D (ENSCJAG00000011580) #21 TFAP2B (ENSCJAG00000011561) #22 ENSCJAG00000078173 PKHD1 (ENSCJAG00000011434) #23 IL17A (ENSCJAG00000011432) #24 IL17F (ENSCJAG00000043579) #25 ENSCJAG00000011389 #26 ENSCJAG00000080533 ENSCJAG00000080195 PAQR8 (ENSCJAG00000011379) #27 EFHC1 (ENSCJAG00000011346) #28 TRAM2 (ENSCJAG00000011314) #29 ENSCJAG00000082568 TMEM14A (ENSCJAG00000011309) #30 ENSCJAG00000066217 ENSCJAG00000060605 ENSCJAG00000034823 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000166012 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 Suina ANCESTRAL SPECIES 17 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00900000143290 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h.q.a #32 ENSGT00940000154526.h.r #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Chacoan peccary MODERN SPECIES 781 MMUT (ENSCWAG00000010929) CENPQ (ENSCWAG00000010863) GLYATL3 (ENSCWAG00000010808) ENSCWAG00000010797 #7 ENSCWAG00000010662 #8 RHAG (ENSCWAG00000009972) #9 CRISP2 (ENSCWAG00000009872) #10 CRISP3 (ENSCWAG00000009771) #14 PGK2 (ENSCWAG00000009751) #15 CRISP1 (ENSCWAG00000009604) #17 ENSCWAG00000009550 DEFB114 (ENSCWAG00000009520) ENSCWAG00000009493 #19 ENSCWAG00000009466 TFAP2D (ENSCWAG00000009359) #21 TFAP2B (ENSCWAG00000009267) #22 ENSCWAG00000009248 PKHD1 (ENSCWAG00000008121) #23 IL17A (ENSCWAG00000007969) #24 IL17F (ENSCWAG00000019202) #25 MCM3 (ENSCWAG00000019032) #26 PAQR8 (ENSCWAG00000019013) #27 EFHC1 (ENSCWAG00000018950) #28 TRAM2 (ENSCWAG00000018920) #29 TMEM14A (ENSCWAG00000018901) #30 ENSCWAG00000018876 #32 ENSCWAG00000018859 #32 ENSCWAG00000018798 GSTA4 (ENSCWAG00000018735) CILK1 (ENSCWAG00000018689) FBXO9 (ENSCWAG00000018597) Pig MODERN SPECIES 15 MMUT (ENSSSCG00000001732) CENPQ (ENSSSCG00000001731) GLYATL3 (ENSSSCG00000033245) ENSSSCG00000001734 #7 RHAG (ENSSSCG00000001735) #9 CRISP2 (ENSSSCG00000001736) #10 CRISP3 (ENSSSCG00000024347) #14 PGK2 (ENSSSCG00000001738) #15 CRISP1 (ENSSSCG00000001739) #17 ENSSSCG00000031069 DEFB114 (ENSSSCG00000001741) DEFB113 (ENSSSCG00000034490) #19 DEFB110 (ENSSSCG00000001743) #20 ENSSSCG00000036460 TFAP2D (ENSSSCG00000001744) #21 TFAP2B (ENSSSCG00000025535) #22 ENSSSCG00000056595 PKHD1 (ENSSSCG00000001746) #23 ENSSSCG00000039768 IL17A (ENSSSCG00000001748) #24 IL17F (ENSSSCG00000054125) #25 MCM3 (ENSSSCG00000025488) #26 PAQR8 (ENSSSCG00000001750) #27 EFHC1 (ENSSSCG00000002620) #28 TRAM2 (ENSSSCG00000038401) #29 ENSSSCG00000058149 TMEM14A (ENSSSCG00000002622) #30 GSTA1 (ENSSSCG00000052947) #32 ENSSSCG00000002623 #32 ENSSSCG00000058308 #32 ENSSSCG00000023467 Artiodactyla_a ANCESTRAL SPECIES 19 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000166012 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000158206.p #30 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Cetacea ANCESTRAL SPECIES 7 ENSGT00390000011892 ENSGT00390000005599 ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00390000008767.a.b ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00390000007738 #7 ENSGT01000000219458 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00390000008767.a.b ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00940000154723.b Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000154603.B ENSGT00940000161228 ENSGT00940000156212 ENSGT00940000157566 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00390000007738 #7 ENSGT01000000219458 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00390000008767.a.b ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00940000154723.b Dolphin MODERN SPECIES 2969 TFAP2B (ENSTTRG00000003800) #22 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000154603.B ENSGT00940000161228 ENSGT00940000156212 ENSGT00940000157566 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00390000007738 #7 ENSGT01000000219458 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00390000008767.a.b ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00940000154723.b Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000154603.B ENSGT00940000161228 ENSGT00940000156212 ENSGT00940000157566 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00390000007738 #7 ENSGT01000000219458 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00390000008767.a.b ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.o.a #30 ENSGT00940000154526.h #32 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00940000154723.b Beluga whale MODERN SPECIES 8 MEP1A (ENSDLEG00000000867) ADGRF5 (ENSDLEG00000000904) ADGRF1 (ENSDLEG00000000980) TNFRSF21 (ENSDLEG00000001016) CD2AP (ENSDLEG00000001041) OPN5 (ENSDLEG00000001084) PTCHD4 (ENSDLEG00000001112) MUT (ENSDLEG00000001129) CENPQ (ENSDLEG00000001158) ENSDLEG00000001190 RHAG (ENSDLEG00000001216) #9 CRISP2 (ENSDLEG00000001268) #10 ENSDLEG00000001355 #17 TFAP2D (ENSDLEG00000001397) #21 ENSDLEG00000001409 TFAP2B (ENSDLEG00000001419) #22 PKHD1 (ENSDLEG00000001491) #23 ENSDLEG00000001960 IL17A (ENSDLEG00000001992) #24 MCM3 (ENSDLEG00000002008) #26 PAQR8 (ENSDLEG00000002037) #27 EFHC1 (ENSDLEG00000002046) #28 TRAM2 (ENSDLEG00000002065) #29 TMEM14A (ENSDLEG00000002084) #30 ENSDLEG00000002101 #32 GSTA4 (ENSDLEG00000002121) ICK (ENSDLEG00000002133) FBXO9 (ENSDLEG00000002148) GCM1 (ENSDLEG00000002174) ELOVL5 (ENSDLEG00000002205) HLA-DQB1 (ENSDLEG00000002245) Narwhal MODERN SPECIES 310 ADGRF1 (ENSMMNG00015017176) TNFRSF21 (ENSMMNG00015017118) CD2AP (ENSMMNG00015017073) OPN5 (ENSMMNG00015016991) PTCHD4 (ENSMMNG00015016953) ENSMMNG00015016931 MMUT (ENSMMNG00015016903) CENPQ (ENSMMNG00015016873) ENSMMNG00015016858 #7 ENSMMNG00015016848 RHAG (ENSMMNG00015016693) #9 CRISP2 (ENSMMNG00015016586) #10 CRISP1 (ENSMMNG00015016511) #17 TFAP2D (ENSMMNG00015016446) #21 ENSMMNG00015016422 TFAP2B (ENSMMNG00015016361) #22 ENSMMNG00015016265 PKHD1 (ENSMMNG00015015772) #23 IL17A (ENSMMNG00015015597) #24 IL17F (ENSMMNG00015015583) #25 MCM3 (ENSMMNG00015015544) #26 PAQR8 (ENSMMNG00015015528) #27 EFHC1 (ENSMMNG00015015488) #28 TRAM2 (ENSMMNG00015015438) #29 ENSMMNG00015015418 #30 ENSMMNG00015015404 #32 GSTA4 (ENSMMNG00015015395) CILK1 (ENSMMNG00015015375) FBXO9 (ENSMMNG00015015321) GCM1 (ENSMMNG00015015289) ENSMMNG00015015268 Vaquita MODERN SPECIES 2 ADGRF5 (ENSPSNG00000008857) ADGRF1 (ENSPSNG00000009011) TNFRSF21 (ENSPSNG00000009140) CD2AP (ENSPSNG00000009294) OPN5 (ENSPSNG00000009417) PTCHD4 (ENSPSNG00000009578) ENSPSNG00000009630 MMUT (ENSPSNG00000009697) CENPQ (ENSPSNG00000009856) ENSPSNG00000009943 #7 RHAG (ENSPSNG00000010096) #9 CRISP2 (ENSPSNG00000010467) #10 CRISP1 (ENSPSNG00000010733) #17 ENSPSNG00000010938 TFAP2D (ENSPSNG00000010982) #21 TFAP2B (ENSPSNG00000011121) #22 PKHD1 (ENSPSNG00000011341) #23 IL17A (ENSPSNG00000012960) #24 IL17F (ENSPSNG00000013032) #25 MCM3 (ENSPSNG00000013109) #26 PAQR8 (ENSPSNG00000013353) #27 EFHC1 (ENSPSNG00000013416) #28 TRAM2 (ENSPSNG00000013712) #29 ENSPSNG00000013758 #30 ENSPSNG00000013816 #32 GSTA4 (ENSPSNG00000013846) CILK1 (ENSPSNG00000013951) FBXO9 (ENSPSNG00000014029) GCM1 (ENSPSNG00000014108) ELOVL5 (ENSPSNG00000014225) ENSPSNG00000014305 Sperm whale MODERN SPECIES 9 PTCHD4 (ENSPCTG00005009297) ENSPCTG00005009345 MMUT (ENSPCTG00005009393) CENPQ (ENSPCTG00005009458) ENSPCTG00005009533 #7 ENSPCTG00005009572 RHAG (ENSPCTG00005009633) #9 CRISP2 (ENSPCTG00005010038) #10 CRISP1 (ENSPCTG00005010113) #17 DEFB133 (ENSPCTG00005010282) #18 DEFB114 (ENSPCTG00005010314) ENSPCTG00005010352 #19 ENSPCTG00005010390 ENSPCTG00005010431 TFAP2D (ENSPCTG00005010496) #21 TFAP2B (ENSPCTG00005010627) #22 PKHD1 (ENSPCTG00005010720) #23 ENSPCTG00005011885 IL17A (ENSPCTG00005004302) #24 IL17F (ENSPCTG00005004341) #25 MCM3 (ENSPCTG00005004374) #26 PAQR8 (ENSPCTG00005004467) #27 EFHC1 (ENSPCTG00005004508) #28 TRAM2 (ENSPCTG00005004651) #29 TMEM14A (ENSPCTG00005004702) #30 ENSPCTG00005004724 #32 GSTA4 (ENSPCTG00005004750) CILK1 (ENSPCTG00005004767) ENSPCTG00005004822 ENSPCTG00005004880 ELOVL5 (ENSPCTG00005004916) Blue whale MODERN SPECIES 2 PTCHD4 (ENSBMSG00010017196) MMUT (ENSBMSG00010017181) CENPQ (ENSBMSG00010017155) ENSBMSG00010017139 #7 RHAG (ENSBMSG00010016450) #9 CRISP2 (ENSBMSG00010016371) #10 PGK2 (ENSBMSG00010016360) #15 CRISP1 (ENSBMSG00010016283) #17 ENSBMSG00010016251 ENSBMSG00010016221 DEFB114 (ENSBMSG00010016205) ENSBMSG00010016185 #19 ENSBMSG00010016161 TFAP2D (ENSBMSG00010016123) #21 ENSBMSG00010016081 TFAP2B (ENSBMSG00010016047) #22 ENSBMSG00010016025 PKHD1 (ENSBMSG00010015888) #23 IL17A (ENSBMSG00010015822) #24 IL17F (ENSBMSG00010015799) #25 MCM3 (ENSBMSG00010015679) #26 PAQR8 (ENSBMSG00010015634) #27 EFHC1 (ENSBMSG00010015480) #28 TRAM2 (ENSBMSG00010015431) #29 TMEM14A (ENSBMSG00010015410) #30 ENSBMSG00010015390 #32 ENSBMSG00010015367 #32 ENSBMSG00010015322 GSTA4 (ENSBMSG00010015291) CILK1 (ENSBMSG00010015250) FBXO9 (ENSBMSG00010015186) Pecora ANCESTRAL SPECIES 21 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000164319 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Percora_a ANCESTRAL SPECIES 12 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000164319 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Bovidae ANCESTRAL SPECIES 13 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Bovinae ANCESTRAL SPECIES 9 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00390000003710.c.a.b.a.b ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 American bison MODERN SPECIES 3345 PTCHD4 (ENSBBBG00000019807) ENSBBBG00000019808 MMUT (ENSBBBG00000019823) CENPQ (ENSBBBG00000019831) GLYATL3 (ENSBBBG00000008017) RHAG (ENSBBBG00000019904) #9 CRISP2 (ENSBBBG00000019922) #10 CRISP3 (ENSBBBG00000019958) #14 PGK2 (ENSBBBG00000005127) #15 CRISP1 (ENSBBBG00000005404) #17 ENSBBBG00000019989 DEFB114 (ENSBBBG00000005405) ENSBBBG00000020001 #19 ENSBBBG00000020004 TFAP2D (ENSBBBG00000020011) #21 TFAP2B (ENSBBBG00000020023) #22 PKHD1 (ENSBBBG00000020399) #23 ENSBBBG00000000695 IL17A (ENSBBBG00000000680) #24 ENSBBBG00000000676 IL17F (ENSBBBG00000000666) #25 MCM3 (ENSBBBG00000000609) #26 ENSBBBG00000000602 PAQR8 (ENSBBBG00000000596) #27 EFHC1 (ENSBBBG00000020498) #28 TRAM2 (ENSBBBG00000020513) #29 TMEM14A (ENSBBBG00000005538) #30 ENSBBBG00000020535 #32 ENSBBBG00000005545 #32 Bos ANCESTRAL SPECIES 17 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00390000003710.c.a.b.a.b ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Bos_b ANCESTRAL SPECIES 8 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01090000261241 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Hybrid Bos Indicus MODERN SPECIES 15 MMUT (ENSBIXG00005027196) CENPQ (ENSBIXG00005027159) GLYATL3 (ENSBIXG00005027142) ENSBIXG00005027122 #7 RHAG (ENSBIXG00005027089) #9 CRISP2 (ENSBIXG00005004644) #10 CRISP3 (ENSBIXG00005027026) #14 PGK2 (ENSBIXG00005026974) #15 CRISP1 (ENSBIXG00005004613) #17 ENSBIXG00005026869 DEFB114 (ENSBIXG00005026856) ENSBIXG00005026837 #19 ENSBIXG00005006615 ENSBIXG00005026805 TFAP2D (ENSBIXG00005026782) #21 TFAP2B (ENSBIXG00005026756) #22 PKHD1 (ENSBIXG00005026553) #23 ENSBIXG00005025213 IL17A (ENSBIXG00005025184) #24 IL17F (ENSBIXG00005007088) #25 MCM3 (ENSBIXG00005025134) #26 PAQR8 (ENSBIXG00005025001) #27 ENSBIXG00005024978 EFHC1 (ENSBIXG00005024957) #28 TRAM2 (ENSBIXG00005024830) #29 ENSBIXG00005024796 TMEM14A (ENSBIXG00005024760) #30 ENSBIXG00005024698 #32 ENSBIXG00005024575 CILK1 (ENSBIXG00005024517) FBXO9 (ENSBIXG00005024313) Cow MODERN SPECIES 15 ENSBTAG00000054235 MMUT (ENSBTAG00000014272) CENPQ (ENSBTAG00000020710) GLYATL3 (ENSBTAG00000025535) C23H6orf141 (ENSBTAG00000047591) #7 RHAG (ENSBTAG00000011300) #9 CRISP2 (ENSBTAG00000002166) #10 CRISP3 (ENSBTAG00000012918) #14 ENSBTAG00000053808 CRISP1 (ENSBTAG00000008085) #17 DEFB114 (ENSBTAG00000054219) DEFB113 (ENSBTAG00000054396) #19 DEFB110 (ENSBTAG00000051453) #20 ENSBTAG00000046711 TFAP2D (ENSBTAG00000020425) #21 TFAP2B (ENSBTAG00000020426) #22 ENSBTAG00000053324 PKHD1 (ENSBTAG00000011237) #23 IL17A (ENSBTAG00000002150) #24 IL17F (ENSBTAG00000016835) #25 MCM3 (ENSBTAG00000010721) #26 PAQR8 (ENSBTAG00000025494) #27 EFHC1 (ENSBTAG00000017810) #28 TRAM2 (ENSBTAG00000009112) #29 ENSBTAG00000055192 TMEM14A (ENSBTAG00000005206) #30 GSTA2 (ENSBTAG00000006546) #32 ENSBTAG00000025485 #32 GSTA1 (ENSBTAG00000021516) #32 GSTA5 (ENSBTAG00000037949) #32 GSTA3 (ENSBTAG00000032642) Bos_a ANCESTRAL SPECIES 11 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00970000198301 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00390000003710.c.a.b.a.b ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.m.b.a #32 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Wild yak MODERN SPECIES 1760 TFAP2D (ENSBMUG00000022795) #21 TFAP2B (ENSBMUG00000022804) #22 ENSBMUG00000022816 PKHD1 (ENSBMUG00000022882) #23 Domestic yak MODERN SPECIES 16 GLYATL3 (ENSBGRG00000024211) ENSBGRG00000024183 #7 RHAG (ENSBGRG00000024029) #9 CRISP2 (ENSBGRG00000023959) #10 ENSBGRG00000023933 ENSBGRG00000023897 CRISP3 (ENSBGRG00000023771) #14 PGK2 (ENSBGRG00000023754) #15 CRISP1 (ENSBGRG00000023658) #17 ENSBGRG00000023617 DEFB114 (ENSBGRG00000023574) ENSBGRG00000023558 #19 ENSBGRG00000023539 ENSBGRG00000023509 TFAP2D (ENSBGRG00000023390) #21 TFAP2B (ENSBGRG00000023229) #22 ENSBGRG00000023198 PKHD1 (ENSBGRG00000021566) #23 ENSBGRG00000021362 #24 ENSBGRG00000021331 #25 MCM3 (ENSBGRG00000020908) #26 ENSBGRG00000020869 PAQR8 (ENSBGRG00000020850) #27 ENSBGRG00000020825 EFHC1 (ENSBGRG00000020698) #28 TRAM2 (ENSBGRG00000020480) #29 TMEM14A (ENSBGRG00000020421) #30 ENSBGRG00000020093 #32 GSTA4 (ENSBGRG00000019949) CILK1 (ENSBGRG00000019840) FBXO9 (ENSBGRG00000019692) Caprinae ANCESTRAL SPECIES 16 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00900000143290 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000154526.h.m.a #32 ENSGT00940000154526.h.m.b.b.b #32 ENSGT00940000154526.h.n #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Goat MODERN SPECIES 15 PTCHD4 (ENSCHIG00000007711) MMUT (ENSCHIG00000023231) CENPQ (ENSCHIG00000021694) GLYATL3 (ENSCHIG00000019294) RHAG (ENSCHIG00000019103) #9 CRISP2 (ENSCHIG00000009328) #10 CRISP3 (ENSCHIG00000012989) #14 PGK2 (ENSCHIG00000003650) #15 ENSCHIG00000004238 ENSCHIG00000010083 CRISP1 (ENSCHIG00000015225) #17 DEFB114 (ENSCHIG00000020648) DEFB110 (ENSCHIG00000017625) #20 ENSCHIG00000008615 TFAP2D (ENSCHIG00000023280) #21 TFAP2B (ENSCHIG00000007665) #22 PKHD1 (ENSCHIG00000021972) #23 IL17A (ENSCHIG00000022239) #24 ENSCHIG00000008358 #25 MCM3 (ENSCHIG00000020423) #26 PAQR8 (ENSCHIG00000004272) #27 EFHC1 (ENSCHIG00000014186) #28 TRAM2 (ENSCHIG00000014597) #29 TMEM14A (ENSCHIG00000018513) #30 ENSCHIG00000008585 #32 ENSCHIG00000013282 #32 ENSCHIG00000026143 #32 ENSCHIG00000006022 #32 ENSCHIG00000008471 GSTA4 (ENSCHIG00000016853) CILK1 (ENSCHIG00000010890) Rambouillet Sheep MODERN SPECIES 12 ENSOARG00020014483 MMUT (ENSOARG00020014615) CENPQ (ENSOARG00020014709) GLYATL3 (ENSOARG00020014786) ENSOARG00020014845 #7 RHAG (ENSOARG00020014891) #9 CRISP3 (ENSOARG00020015128) #14 PGK2 (ENSOARG00020015502) #15 CRISP1 (ENSOARG00020015573) #17 ENSOARG00020015759 DEFB114 (ENSOARG00020015818) ENSOARG00020015856 #19 ENSOARG00020015886 ENSOARG00020015930 TFAP2D (ENSOARG00020015981) #21 TFAP2B (ENSOARG00020016055) #22 PKHD1 (ENSOARG00020016458) #23 IL17A (ENSOARG00020019903) #24 ENSOARG00020019944 #25 MCM3 (ENSOARG00020019991) #26 PAQR8 (ENSOARG00020020203) #27 EFHC1 (ENSOARG00020020221) #28 ENSOARG00020020412 TRAM2 (ENSOARG00020020430) #29 TMEM14A (ENSOARG00020020512) #30 ENSOARG00020020565 #32 ENSOARG00020020785 #32 ENSOARG00020020898 #32 ENSOARG00020020938 GSTA4 (ENSOARG00020021007) CILK1 (ENSOARG00020021095) Siberian musk deer MODERN SPECIES 355 ENSMMSG00000010087 MMUT (ENSMMSG00000010109) CENPQ (ENSMMSG00000010166) GLYATL3 (ENSMMSG00000010191) ENSMMSG00000010229 #7 RHAG (ENSMMSG00000010283) #9 CRISP2 (ENSMMSG00000010560) #10 CRISP3 (ENSMMSG00000010609) #14 PGK2 (ENSMMSG00000010682) #15 CRISP1 (ENSMMSG00000010711) #17 ENSMMSG00000010809 DEFB114 (ENSMMSG00000010840) ENSMMSG00000010864 #19 ENSMMSG00000010891 TFAP2D (ENSMMSG00000010911) #21 TFAP2B (ENSMMSG00000010960) #22 PKHD1 (ENSMMSG00000011131) #23 ENSMMSG00000012401 IL17A (ENSMMSG00000012428) #24 IL17F (ENSMMSG00000012453) #25 MCM3 (ENSMMSG00000012469) #26 PAQR8 (ENSMMSG00000012597) #27 EFHC1 (ENSMMSG00000012624) #28 TRAM2 (ENSMMSG00000012917) #29 TMEM14A (ENSMMSG00000007019) #30 ENSMMSG00000007076 #32 GSTA3 (ENSMMSG00000007165) ENSMMSG00000007230 GSTA4 (ENSMMSG00000007272) CILK1 (ENSMMSG00000007320) FBXO9 (ENSMMSG00000007357) Yarkand deer MODERN SPECIES 30 CENPQ (ENSCHYG00000004428) GLYATL3 (ENSCHYG00000004451) ENSCHYG00000004460 #7 RHAG (ENSCHYG00000004495) #9 CRISP2 (ENSCHYG00000004535) #10 CRISP3 (ENSCHYG00000004545) #14 PGK2 (ENSCHYG00000004559) #15 CRISP1 (ENSCHYG00000004574) #17 ENSCHYG00000004600 DEFB114 (ENSCHYG00000004611) ENSCHYG00000004622 #19 ENSCHYG00000000185 ENSCHYG00000000193 ENSCHYG00000000206 TFAP2D (ENSCHYG00000000212) #21 TFAP2B (ENSCHYG00000000256) #22 PKHD1 (ENSCHYG00000000348) #23 IL17A (ENSCHYG00000000544) #24 IL17F (ENSCHYG00000000554) #25 MCM3 (ENSCHYG00000000583) #26 PAQR8 (ENSCHYG00000000660) #27 EFHC1 (ENSCHYG00000000722) #28 TRAM2 (ENSCHYG00000000901) #29 ENSCHYG00000000961 TMEM14A (ENSCHYG00000000971) #30 ENSCHYG00000001040 #32 ENSCHYG00000001165 GSTA4 (ENSCHYG00000001213) CILK1 (ENSCHYG00000001256) FBXO9 (ENSCHYG00000001319) GCM1 (ENSCHYG00000001431) Camelidae ANCESTRAL SPECIES 13 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00900000143290 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.p #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Arabian camel MODERN SPECIES 12 CENPQ (ENSCDRG00005018406) GLYATL3 (ENSCDRG00005018441) ENSCDRG00005018467 #7 ENSCDRG00005018485 #8 RHAG (ENSCDRG00005018599) #9 CRISP2 (ENSCDRG00005019315) #10 CRISP3 (ENSCDRG00005019335) #14 ENSCDRG00005019362 PGK2 (ENSCDRG00005008847) #15 CRISP1 (ENSCDRG00005008884) #17 ENSCDRG00005009079 DEFB114 (ENSCDRG00005009130) ENSCDRG00005009165 #19 ENSCDRG00005009210 TFAP2D (ENSCDRG00005009248) #21 TFAP2B (ENSCDRG00005009426) #22 PKHD1 (ENSCDRG00005009579) #23 IL17A (ENSCDRG00005010750) #24 IL17F (ENSCDRG00005010775) #25 MCM3 (ENSCDRG00005010811) #26 ENSCDRG00005011086 PAQR8 (ENSCDRG00005011116) #27 EFHC1 (ENSCDRG00005011151) #28 TRAM2 (ENSCDRG00005011552) #29 ENSCDRG00005011642 #30 ENSCDRG00005011698 ENSCDRG00005011762 #32 ENSCDRG00005012038 GSTA4 (ENSCDRG00005012092) CILK1 (ENSCDRG00005012148) FBXO9 (ENSCDRG00005012262) Alpaca MODERN SPECIES 1946 PGK2 (ENSVPAG00000012123) #15 ENSVPAG00000012124 ENSVPAG00000012125 DEFB113 (ENSVPAG00000012126) #19 DEFB110 (ENSVPAG00000012129) #20 ENSVPAG00000012132 TFAP2D (ENSVPAG00000012135) #21 ENSVPAG00000012139 #22 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00940000167568 #18 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000164319 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 Carnivora ANCESTRAL SPECIES 4 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Caniformia ANCESTRAL SPECIES 3 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Canidae ANCESTRAL SPECIES 6 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778.a.a.a ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Red fox MODERN SPECIES 7 OPN5 (ENSVVUG00000029319) PTCHD4 (ENSVVUG00000029322) MUT (ENSVVUG00000029325) CENPQ (ENSVVUG00000029327) GLYATL3 (ENSVVUG00000029329) ENSVVUG00000029330 #8 RHAG (ENSVVUG00000029332) #9 CRISP2 (ENSVVUG00000029335) #10 PGK2 (ENSVVUG00000029337) #15 CRISP1 (ENSVVUG00000029339) #17 DEFB114 (ENSVVUG00000029340) DEFB113 (ENSVVUG00000029341) #19 DEFB110 (ENSVVUG00000029342) #20 ENSVVUG00000029343 TFAP2D (ENSVVUG00000029349) #21 TFAP2B (ENSVVUG00000029350) #22 PKHD1 (ENSVVUG00000029354) #23 IL17A (ENSVVUG00000029390) #24 ENSVVUG00000000020 #25 MCM3 (ENSVVUG00000000023) #26 PAQR8 (ENSVVUG00000000031) #27 EFHC1 (ENSVVUG00000000034) #28 TRAM2 (ENSVVUG00000000039) #29 ENSVVUG00000000047 #30 ENSVVUG00000000107 GSTA3 (ENSVVUG00000000776) ENSVVUG00000000787 GSTA4 (ENSVVUG00000000802) ICK (ENSVVUG00000000836) FBXO9 (ENSVVUG00000000847) GCM1 (ENSVVUG00000000853) Canis_lupus ANCESTRAL SPECIES 11 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778.a.a.a ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000009040.f Dingo MODERN SPECIES 276 MMUT (ENSCAFG00020012887) CENPQ (ENSCAFG00020012888) GLYATL3 (ENSCAFG00020012891) ENSCAFG00020012895 #7 ENSCAFG00020012900 #8 RHAG (ENSCAFG00020012930) #9 CRISP2 (ENSCAFG00020012945) #10 CRISP3 (ENSCAFG00020012950) #14 PGK2 (ENSCAFG00020012973) #15 CRISP1 (ENSCAFG00020012976) #17 DEFB114 (ENSCAFG00020012990) DEFB113 (ENSCAFG00020012992) #19 DEFB110 (ENSCAFG00020012995) #20 ENSCAFG00020012997 TFAP2D (ENSCAFG00020013014) #21 TFAP2B (ENSCAFG00020013037) #22 ENSCAFG00020013074 ENSCAFG00020013095 #23 ENSCAFG00020013106 ENSCAFG00020013110 IL17A (ENSCAFG00020013118) #24 IL17F (ENSCAFG00020013124) #25 MCM3 (ENSCAFG00020013128) #26 PAQR8 (ENSCAFG00020013138) #27 EFHC1 (ENSCAFG00020013152) #28 TRAM2 (ENSCAFG00020013215) #29 TMEM14A (ENSCAFG00020013218) #30 ENSCAFG00020013223 ENSCAFG00020013267 #32 ENSCAFG00020013286 ENSCAFG00020013287 Dog MODERN SPECIES 3 ENSCAFG00845006435 MMUT (ENSCAFG00845006463) CENPQ (ENSCAFG00845006498) GLYATL3 (ENSCAFG00845006531) ENSCAFG00845006548 #7 ENSCAFG00845006583 #8 RHAG (ENSCAFG00845006661) #9 CRISP2 (ENSCAFG00845006782) #14 PGK2 (ENSCAFG00845006942) #15 ENSCAFG00845006978 #17 DEFB114 (ENSCAFG00845007058) DEFB113 (ENSCAFG00845007099) #19 DEFB110 (ENSCAFG00845007134) #20 DEFB112 (ENSCAFG00845007163) TFAP2D (ENSCAFG00845007225) #21 TFAP2B (ENSCAFG00845007336) #22 PKHD1 (ENSCAFG00845007749) #23 ENSCAFG00845008776 #24 ENSCAFG00845008815 #25 MCM3 (ENSCAFG00845008858) #26 PAQR8 (ENSCAFG00845008976) #27 EFHC1 (ENSCAFG00845009042) #28 TRAM2 (ENSCAFG00845009321) #29 ENSCAFG00845009462 ENSCAFG00845009512 #30 ENSCAFG00845009595 ENSCAFG00845009638 #32 ENSCAFG00845009716 GSTA4 (ENSCAFG00845009775) CILK1 (ENSCAFG00845009901) FBXO9 (ENSCAFG00845010007) Caniformia_b ANCESTRAL SPECIES 6 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT01040000243268 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Ursidae ANCESTRAL SPECIES 35 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT01040000243268 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Ursus ANCESTRAL SPECIES 28 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h.y.b #32 ENSGT00940000154526.h.y.a #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Polar bear MODERN SPECIES 174 OPN5 (ENSUMAG00000004947) PTCHD4 (ENSUMAG00000004941) MMUT (ENSUMAG00000004937) CENPQ (ENSUMAG00000004933) GLYATL3 (ENSUMAG00000004931) ENSUMAG00000004674 #8 RHAG (ENSUMAG00000004639) #9 CRISP2 (ENSUMAG00000004625) #10 CRISP3 (ENSUMAG00000004620) #14 PGK2 (ENSUMAG00000004614) #15 CRISP1 (ENSUMAG00000004606) #17 DEFB114 (ENSUMAG00000004596) DEFB113 (ENSUMAG00000004594) #19 DEFB110 (ENSUMAG00000004590) #20 TFAP2D (ENSUMAG00000004569) #21 TFAP2B (ENSUMAG00000004537) #22 PKHD1 (ENSUMAG00000004400) #23 IL17A (ENSUMAG00000004369) #24 IL17F (ENSUMAG00000004365) #25 MCM3 (ENSUMAG00000004355) #26 PAQR8 (ENSUMAG00000004353) #27 EFHC1 (ENSUMAG00000004342) #28 TRAM2 (ENSUMAG00000004285) #29 TMEM14A (ENSUMAG00000004281) #30 ENSUMAG00000004280 ENSUMAG00000004271 #32 ENSUMAG00000004238 #32 ENSUMAG00000004224 GSTA4 (ENSUMAG00000004218) CILK1 (ENSUMAG00000004198) FBXO9 (ENSUMAG00000004188) American black bear MODERN SPECIES 1795 TFAP2D (ENSUAMG00000023317) #21 TFAP2B (ENSUAMG00000023323) #22 Giant Panda MODERN SPECIES 10 CENPQ (ENSAMEG00000024635) GLYATL3 (ENSAMEG00000026633) ENSAMEG00000008889 #7 ENSAMEG00000008867 #8 RHAG (ENSAMEG00000008815) #9 CRISP3 (ENSAMEG00000008761) #14 PGK2 (ENSAMEG00000019293) #15 CRISP1 (ENSAMEG00000030508) #17 ENSAMEG00000031410 DEFB114 (ENSAMEG00000008754) DEFB113 (ENSAMEG00000008753) #19 ENSAMEG00000024830 ENSAMEG00000008748 ENSAMEG00000028632 TFAP2D (ENSAMEG00000008744) #21 TFAP2B (ENSAMEG00000008680) #22 ENSAMEG00000029833 PKHD1 (ENSAMEG00000008599) #23 IL17A (ENSAMEG00000025948) #24 IL17F (ENSAMEG00000025810) #25 MCM3 (ENSAMEG00000008540) #26 PAQR8 (ENSAMEG00000019263) #27 EFHC1 (ENSAMEG00000008516) #28 TRAM2 (ENSAMEG00000008465) #29 TMEM14A (ENSAMEG00000002373) #30 ENSAMEG00000002320 #32 ENSAMEG00000005598 GSTA4 (ENSAMEG00000005658) CILK1 (ENSAMEG00000005669) FBXO9 (ENSAMEG00000005714) GCM1 (ENSAMEG00000005755) Mustelinae ANCESTRAL SPECIES 8 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.d ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT01040000243268 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000163367 #31 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778.d ENSGT00940000158807 ENSGT00390000014256 American mink MODERN SPECIES 263 ENSNVIG00000004623 NOC2L (ENSNVIG00000004601) KLHL17 (ENSNVIG00000004581) PLEKHN1 (ENSNVIG00000004508) ENSNVIG00000004505 ISG15 (ENSNVIG00000004492) CRISP3 (ENSNVIG00000004466) #14 PGK2 (ENSNVIG00000004461) #15 ENSNVIG00000004438 #17 ENSNVIG00000004434 DEFB114 (ENSNVIG00000004427) DEFB113 (ENSNVIG00000004421) #19 DEFB110 (ENSNVIG00000004419) #20 ENSNVIG00000004413 TFAP2D (ENSNVIG00000004380) #21 TFAP2B (ENSNVIG00000004368) #22 ENSNVIG00000004360 PKHD1 (ENSNVIG00000004232) #23 IL17A (ENSNVIG00000004217) #24 Ferret MODERN SPECIES 328 ENSMPUG00000009342 ENSMPUG00000009246 #8 RHAG (ENSMPUG00000009226) #9 CRISP2 (ENSMPUG00000009206) #10 CRISP3 (ENSMPUG00000009188) #14 PGK2 (ENSMPUG00000009179) #15 CRISP1 (ENSMPUG00000009126) #17 ENSMPUG00000009106 TFAP2D (ENSMPUG00000009095) #21 TFAP2B (ENSMPUG00000009084) #22 PKHD1 (ENSMPUG00000009027) #23 IL17A (ENSMPUG00000009002) #24 ENSMPUG00000008998 #25 MCM3 (ENSMPUG00000008986) #26 PAQR8 (ENSMPUG00000008975) #27 EFHC1 (ENSMPUG00000008966) #28 TRAM2 (ENSMPUG00000008954) #29 ENSMPUG00000008935 #30 ENSMPUG00000008923 #32 ENSMPUG00000008918 ENSMPUG00000008911 CILK1 (ENSMPUG00000008895) FBXO9 (ENSMPUG00000008879) GCM1 (ENSMPUG00000008870) ELOVL5 (ENSMPUG00000008865) Felidae ANCESTRAL SPECIES 5 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Panthera ANCESTRAL SPECIES 7 ENSGT00390000011892 ENSGT00390000005599.k ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00910000147043 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Tiger MODERN SPECIES 502 MMUT (ENSPTIG00000002070) ENSPTIG00000005493 GLYATL3 (ENSPTIG00000006124) RHAG (ENSPTIG00000006917) #9 CRISP2 (ENSPTIG00000007728) #10 CRISP3 (ENSPTIG00000008183) #14 PGK2 (ENSPTIG00000005933) #15 CRISP1 (ENSPTIG00000010800) #17 ENSPTIG00000013176 #18 DEFB114 (ENSPTIG00000013188) DEFB113 (ENSPTIG00000013601) #19 DEFB110 (ENSPTIG00000013917) #20 ENSPTIG00000014718 TFAP2D (ENSPTIG00000014790) #21 TFAP2B (ENSPTIG00000015692) #22 PKHD1 (ENSPTIG00000016269) #23 IL17A (ENSPTIG00000013074) #24 ENSPTIG00000014469 #25 MCM3 (ENSPTIG00000014984) #26 PAQR8 (ENSPTIG00000006353) #27 EFHC1 (ENSPTIG00000020087) #28 TRAM2 (ENSPTIG00000011782) #29 TMEM14A (ENSPTIG00000012513) #30 ENSPTIG00000012893 ENSPTIG00000019425 #32 ENSPTIG00000019692 GSTA4 (ENSPTIG00000001771) CILK1 (ENSPTIG00000005233) FBXO9 (ENSPTIG00000006392) GCM1 (ENSPTIG00000008977) Panthera_a ANCESTRAL SPECIES 4 ENSGT00390000005599.k ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00910000147043 ENSGT00900000143290 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 leopard MODERN SPECIES 30 MMUT (ENSPPRG00000002273) ENSPPRG00000002113 GLYATL3 (ENSPPRG00000002024) ENSPPRG00000000728 #7 RHAG (ENSPPRG00000023070) #9 CRISP2 (ENSPPRG00000023239) #10 CRISP3 (ENSPPRG00000023334) #14 PGK2 (ENSPPRG00000014531) #15 ENSPPRG00000023824 #17 ENSPPRG00000014518 #18 DEFB114 (ENSPPRG00000024231) DEFB113 (ENSPPRG00000024287) #19 DEFB110 (ENSPPRG00000024311) #20 ENSPPRG00000024419 TFAP2D (ENSPPRG00000024559) #21 TFAP2B (ENSPPRG00000024586) #22 ENSPPRG00000014502 PKHD1 (ENSPPRG00000024687) #23 IL17A (ENSPPRG00000024972) #24 IL17F (ENSPPRG00000025009) #25 MCM3 (ENSPPRG00000025020) #26 PAQR8 (ENSPPRG00000014367) #27 EFHC1 (ENSPPRG00000017929) #28 TRAM2 (ENSPPRG00000013374) #29 TMEM14A (ENSPPRG00000013164) #30 ENSPPRG00000012997 ENSPPRG00000012829 #32 ENSPPRG00000012459 #32 ENSPPRG00000010128 GSTA4 (ENSPPRG00000010076) CILK1 (ENSPPRG00000009939) lion MODERN SPECIES 5 MMUT (ENSPLOG00000002400) ENSPLOG00000002431 GLYATL3 (ENSPLOG00000002445) ENSPLOG00000002459 #7 RHAG (ENSPLOG00000002490) #9 CRISP2 (ENSPLOG00000002530) #10 CRISP3 (ENSPLOG00000002561) #14 PGK2 (ENSPLOG00000002586) #15 CRISP1 (ENSPLOG00000002615) #17 ENSPLOG00000002728 DEFB114 (ENSPLOG00000002746) DEFB113 (ENSPLOG00000002765) #19 ENSPLOG00000002784 ENSPLOG00000002805 TFAP2D (ENSPLOG00000002828) #21 TFAP2B (ENSPLOG00000002864) #22 PKHD1 (ENSPLOG00000002992) #23 IL17A (ENSPLOG00000003180) #24 IL17F (ENSPLOG00000003194) #25 MCM3 (ENSPLOG00000003222) #26 PAQR8 (ENSPLOG00000003284) #27 EFHC1 (ENSPLOG00000003384) #28 TRAM2 (ENSPLOG00000003508) #29 TMEM14A (ENSPLOG00000003538) #30 ENSPLOG00000003623 ENSPLOG00000003645 ENSPLOG00000003654 #32 ENSPLOG00000003677 GSTA4 (ENSPLOG00000003698) CILK1 (ENSPLOG00000003736) FBXO9 (ENSPLOG00000003770) Cat MODERN SPECIES 236 ENSFCAG00000047070 MMUT (ENSFCAG00000025853) CENPQ (ENSFCAG00000022301) GLYATL3 (ENSFCAG00000003022) ENSFCAG00000051234 #7 RHAG (ENSFCAG00000001258) #9 CRISP3 (ENSFCAG00000028647) #14 PGK2 (ENSFCAG00000025078) #15 CRISP1 (ENSFCAG00000002580) #17 ENSFCAG00000045877 DEFB114 (ENSFCAG00000039120) DEFB113 (ENSFCAG00000038240) #19 DEFB110 (ENSFCAG00000024655) #20 DEFB112 (ENSFCAG00000010863) TFAP2D (ENSFCAG00000003435) #21 TFAP2B (ENSFCAG00000015482) #22 PKHD1 (ENSFCAG00000009219) #23 IL17A (ENSFCAG00000033485) #24 IL17F (ENSFCAG00000008513) #25 MCM3 (ENSFCAG00000026755) #26 PAQR8 (ENSFCAG00000031260) #27 EFHC1 (ENSFCAG00000011487) #28 TRAM2 (ENSFCAG00000002975) #29 TMEM14A (ENSFCAG00000025366) #30 ENSFCAG00000034807 ENSFCAG00000005236 #32 ENSFCAG00000049404 ENSFCAG00000024966 GSTA4 (ENSFCAG00000036046) CILK1 (ENSFCAG00000005238) FBXO9 (ENSFCAG00000029612) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a Equus ANCESTRAL SPECIES 10 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00950000182891.a.a.b.a.a.a.b.a.a ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000165202.C.l ENSGT00940000158206 #30 ENSGT00940000154526.h.v #32 ENSGT00940000164319 ENSGT00940000154526.h.u.a.b.a.b #32 ENSGT00940000154526.h.u.a.a.a #32 Donkey MODERN SPECIES 28 PTCHD4 (ENSEASG00005004051) MMUT (ENSEASG00005004053) CENPQ (ENSEASG00005004059) GLYATL3 (ENSEASG00005004063) ENSEASG00005004066 #7 RHAG (ENSEASG00005004079) #9 ENSEASG00005004108 CRISP2 (ENSEASG00005004114) #10 CRISP3 (ENSEASG00005004119) #14 PGK2 (ENSEASG00005033787) #15 CRISP1 (ENSEASG00005004126) #17 DEFB114 (ENSEASG00005025998) DEFB113 (ENSEASG00005004132) #19 DEFB110 (ENSEASG00005028434) #20 TFAP2D (ENSEASG00005004143) #21 TFAP2B (ENSEASG00005004150) #22 ENSEASG00005004154 ENSEASG00005026197 PKHD1 (ENSEASG00005004167) #23 IL17A (ENSEASG00005004197) #24 IL17F (ENSEASG00005029310) #25 MCM3 (ENSEASG00005004205) #26 EFHC1 (ENSEASG00005004217) #28 TRAM2 (ENSEASG00005004236) #29 ENSEASG00005004245 ENSEASG00005033157 ENSEASG00005028323 #30 ENSEASG00005027355 #32 ENSEASG00005024395 #32 ENSEASG00005004299 #32 ENSEASG00005030146 #32 Horse MODERN SPECIES 12 ENSECAG00000052840 MMUT (ENSECAG00000007779) CENPQ (ENSECAG00000011226) ENSECAG00000056649 GLYATL3 (ENSECAG00000011755) RHAG (ENSECAG00000012957) #9 ENSECAG00000019920 CRISP2 (ENSECAG00000006482) #10 PGK2 (ENSECAG00000003389) #15 CRISP1 (ENSECAG00000011049) #17 DEFB114 (ENSECAG00000040842) DEFB113 (ENSECAG00000033376) #19 DEFB110 (ENSECAG00000058073) #20 ENSECAG00000032228 TFAP2D (ENSECAG00000012285) #21 TFAP2B (ENSECAG00000015046) #22 ENSECAG00000046206 PKHD1 (ENSECAG00000022699) #23 IL17A (ENSECAG00000038266) #24 ENSECAG00000031935 #25 MCM3 (ENSECAG00000020506) #26 PAQR8 (ENSECAG00000005594) #27 EFHC1 (ENSECAG00000008434) #28 TRAM2 (ENSECAG00000010916) #29 ENSECAG00000030805 TMEM14A (ENSECAG00000015579) #30 ENSECAG00000052505 ENSECAG00000044907 #32 ENSECAG00000046735 #32 ENSECAG00000033172 ENSECAG00000039093 #32 Chiroptera ANCESTRAL SPECIES 3 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Megabat MODERN SPECIES 3595 TFAP2D (ENSPVAG00000007478) #21 TFAP2B (ENSPVAG00000007479) #22 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00940000162362 #17 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00390000006761 #20 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Greater horseshoe bat MODERN SPECIES 21 CENPQ (ENSRFEG00010008306) GLYATL3 (ENSRFEG00010008340) ENSRFEG00010008392 #7 RHAG (ENSRFEG00010008443) #9 ENSRFEG00010008558 ENSRFEG00010008592 CRISP2 (ENSRFEG00010008622) #10 CRISP3 (ENSRFEG00010008695) #14 PGK2 (ENSRFEG00010008789) #15 CRISP1 (ENSRFEG00010008812) #17 ENSRFEG00010008951 DEFB114 (ENSRFEG00010008975) DEFB113 (ENSRFEG00010009018) #19 ENSRFEG00010009052 TFAP2D (ENSRFEG00010009088) #21 TFAP2B (ENSRFEG00010009189) #22 ENSRFEG00010009444 PKHD1 (ENSRFEG00010009512) #23 IL17A (ENSRFEG00010010796) #24 IL17F (ENSRFEG00010010852) #25 MCM3 (ENSRFEG00010010927) #26 PAQR8 (ENSRFEG00010011220) #27 EFHC1 (ENSRFEG00010011237) #28 TRAM2 (ENSRFEG00010011364) #29 TMEM14A (ENSRFEG00010011433) #30 ENSRFEG00010011486 #32 ENSRFEG00010011511 GSTA4 (ENSRFEG00010011544) CILK1 (ENSRFEG00010011638) FBXO9 (ENSRFEG00010011690) GCM1 (ENSRFEG00010011767) Microbat MODERN SPECIES 1048 PTCHD4 (ENSMLUG00000002884) OPN5 (ENSMLUG00000002878) ENSMLUG00000030405 ENSMLUG00000002858 RHAG (ENSMLUG00000012875) #9 ENSMLUG00000010302 #10 ENSMLUG00000026053 #10 CRISP3 (ENSMLUG00000002126) #14 CRISP1 (ENSMLUG00000017580) #17 DEFB114 (ENSMLUG00000011206) DEFB113 (ENSMLUG00000025016) #19 DEFB110 (ENSMLUG00000006294) #20 ENSMLUG00000025685 ENSMLUG00000015666 TFAP2D (ENSMLUG00000005054) #21 TFAP2B (ENSMLUG00000016209) #22 PKHD1 (ENSMLUG00000014592) #23 IL17A (ENSMLUG00000001736) #24 IL17F (ENSMLUG00000001744) #25 MCM3 (ENSMLUG00000001752) #26 PAQR8 (ENSMLUG00000001768) #27 EFHC1 (ENSMLUG00000013628) #28 TRAM2 (ENSMLUG00000013636) #29 ENSMLUG00000023726 TMEM14A (ENSMLUG00000030435) #30 ENSMLUG00000010177 #32 ENSMLUG00000029046 #32 ENSMLUG00000025719 #32 ENSMLUG00000030329 GSTA4 (ENSMLUG00000002733) CILK1 (ENSMLUG00000002739) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182848.c.b.b.b #22 Common shrew MODERN SPECIES 7278 TFAP2B (ENSSARG00000005232) #22 Hedgehog MODERN SPECIES 15530 TFAP2B (ENSEEUG00000014925) #22 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00400000023650 ENSGT00390000016155 ENSGT00400000023306 #19 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Xenarthra ANCESTRAL SPECIES 1597 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 Armadillo MODERN SPECIES 2588 TFAP2D (ENSDNOG00000008143) #21 TFAP2B (ENSDNOG00000041262) #22 Afrotheria ANCESTRAL SPECIES 24 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00400000023306 #19 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Tenrec MODERN SPECIES 17188 TFAP2B (ENSETEG00000009017) #22 Afrotheria_a ANCESTRAL SPECIES 23 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00390000007738 #7 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162013 #14 ENSGT00390000008820.e.a #15 ENSGT00400000023306 #19 ENSGT00410000029004 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00910000145322 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000154526.h #32 ENSGT00940000161750 ENSGT00940000162778 ENSGT00940000158807 ENSGT00390000014256 Elephant MODERN SPECIES 1 OPN5 (ENSLAFG00000016762) PTCHD4 (ENSLAFG00000016766) ENSLAFG00000031546 MMUT (ENSLAFG00000003857) CENPQ (ENSLAFG00000003858) GLYATL3 (ENSLAFG00000003861) ENSLAFG00000002791 #7 RHAG (ENSLAFG00000004728) #9 ENSLAFG00000031706 CRISP2 (ENSLAFG00000005361) #10 ENSLAFG00000000995 #14 PGK2 (ENSLAFG00000008546) #15 DEFB113 (ENSLAFG00000020991) #19 ENSLAFG00000016703 TFAP2D (ENSLAFG00000006172) #21 TFAP2B (ENSLAFG00000027209) #22 ENSLAFG00000030680 ENSLAFG00000032031 #23 ENSLAFG00000012699 #23 ENSLAFG00000031836 IL17A (ENSLAFG00000001544) #24 IL17F (ENSLAFG00000002150) #25 MCM3 (ENSLAFG00000010584) #26 PAQR8 (ENSLAFG00000009293) #27 EFHC1 (ENSLAFG00000005509) #28 TRAM2 (ENSLAFG00000005516) #29 TMEM14A (ENSLAFG00000001644) #30 ENSLAFG00000026604 ENSLAFG00000027205 #32 ENSLAFG00000031720 #32 ENSLAFG00000031171 Hyrax MODERN SPECIES 7622 TFAP2B (ENSPCAG00000015999) #22 Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000156212 ENSGT00940000157566 ENSGT00940000162401 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000161750 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00390000011908 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000156212 ENSGT00940000157566 ENSGT00940000162401 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000161750 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00390000011908 Diprotodontia ANCESTRAL SPECIES 37 ENSGT00940000156212 ENSGT00940000157566 ENSGT00940000162401 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206 #30 ENSGT00940000166012 ENSGT00940000161750 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b ENSGT00390000011908 Diprotodontia_a ANCESTRAL SPECIES 36 ENSGT00940000156212 ENSGT00940000157566 ENSGT00940000162401 ENSGT00940000161797 ENSGT01100000263524.B.a ENSGT00940000156827 ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000167629 ENSGT00940000156439 #10 ENSGT00940000162362 #17 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000161882 #24 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000158206.f #30 ENSGT00940000166012.a.a ENSGT00940000166012.b ENSGT00940000161750 ENSGT00940000158807 ENSGT00390000014256 ENSGT00390000006777.a ENSGT01050000244838.C.b Common wonbat MODERN SPECIES 1061 ENSVURG00010003986 ADGRF4 (ENSVURG00010003970) OPN5 (ENSVURG00010003945) ENSVURG00010003932 ENSVURG00010003918 ENSVURG00010003910 MMUT (ENSVURG00010003869) ENSVURG00010003846 GLYATL3 (ENSVURG00010003832) RHAG (ENSVURG00010003442) #9 ENSVURG00010003403 ENSVURG00010003400 CRISP2 (ENSVURG00010003390) #10 ENSVURG00010003360 #17 TFAP2D (ENSVURG00010003345) #21 TFAP2B (ENSVURG00010003333) #22 koala MODERN SPECIES 54 OPN5 (ENSPCIG00000012632) ENSPCIG00000012631 ENSPCIG00000012630 MMUT (ENSPCIG00000013001) ENSPCIG00000012996 GLYATL3 (ENSPCIG00000032282) ENSPCIG00000030199 #8 RHAG (ENSPCIG00000030203) #9 ENSPCIG00000030205 ENSPCIG00000015108 CRISP2 (ENSPCIG00000019841) #10 ENSPCIG00000019838 ENSPCIG00000036631 #17 ENSPCIG00000023828 TFAP2D (ENSPCIG00000007171) #21 TFAP2B (ENSPCIG00000007165) #22 PKHD1 (ENSPCIG00000003504) #23 IL17A (ENSPCIG00000035772) #24 ENSPCIG00000034042 #25 MCM3 (ENSPCIG00000014331) #26 ENSPCIG00000014334 PAQR8 (ENSPCIG00000037305) #27 EFHC1 (ENSPCIG00000003906) #28 TRAM2 (ENSPCIG00000003947) #29 ENSPCIG00000013272 ENSPCIG00000003985 ENSPCIG00000013280 ENSPCIG00000032157 ENSPCIG00000030864 CILK1 (ENSPCIG00000034988) FBXO9 (ENSPCIG00000012476) Wallaby MODERN SPECIES 815 TFAP2B (ENSMEUG00000013073) #22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000028018 ADGRF4 (ENSSHAG00000007150) OPN5 (ENSSHAG00000008253) PTCHD4 (ENSSHAG00000009441) MMUT (ENSSHAG00000001599) ENSSHAG00000003275 GLYATL3 (ENSSHAG00000004258) ENSSHAG00000031560 ENSSHAG00000023038 #8 CRISP2 (ENSSHAG00000001880) #10 ENSSHAG00000000853 #17 ENSSHAG00000006653 ENSSHAG00000022744 ENSSHAG00000029329 TFAP2D (ENSSHAG00000028854) #21 TFAP2B (ENSSHAG00000012585) #22 PKHD1 (ENSSHAG00000010639) #23 IL17A (ENSSHAG00000012109) #24 ENSSHAG00000032353 #25 MCM3 (ENSSHAG00000012437) #26 PAQR8 (ENSSHAG00000031854) #27 EFHC1 (ENSSHAG00000013635) #28 TRAM2 (ENSSHAG00000014037) #29 TMEM14A (ENSSHAG00000014906) #30 ENSSHAG00000026000 ENSSHAG00000028098 CILK1 (ENSSHAG00000015447) FBXO9 (ENSSHAG00000015737) GCM1 (ENSSHAG00000015905) ELOVL5 (ENSSHAG00000028536) GCLC (ENSSHAG00000016777) Opossum MODERN SPECIES 1 ADGRF4 (ENSMODG00000018861) OPN5 (ENSMODG00000018859) ENSMODG00000023522 ENSMODG00000018858 ENSMODG00000043712 MMUT (ENSMODG00000018855) GLYATL3 (ENSMODG00000041446) ENSMODG00000018850 #8 RHAG (ENSMODG00000018849) #9 ENSMODG00000018846 #10 ENSMODG00000018844 ENSMODG00000039954 CRISP2 (ENSMODG00000025686) #10 ENSMODG00000018838 #17 TFAP2D (ENSMODG00000018834) #21 TFAP2B (ENSMODG00000018831) #22 PKHD1 (ENSMODG00000018828) #23 IL17A (ENSMODG00000018824) #24 ENSMODG00000018823 #25 MCM3 (ENSMODG00000018822) #26 PAQR8 (ENSMODG00000023518) #27 EFHC1 (ENSMODG00000018819) #28 TRAM2 (ENSMODG00000018818) #29 ENSMODG00000039234 #30 ENSMODG00000018815 ENSMODG00000018812 ENSMODG00000018813 CILK1 (ENSMODG00000018808) FBXO9 (ENSMODG00000018806) GCM1 (ENSMODG00000018803) ELOVL5 (ENSMODG00000018802) Platypus MODERN SPECIES 84 SRD5A2 (ENSOANG00000003946) ENSOANG00000003947 ENSOANG00000029648 ENSOANG00000003950 ENSOANG00000012924 ENSOANG00000002004 ENSOANG00000003948 ENSOANG00000012923 ENSOANG00000029415 #10 CRISP2 (ENSOANG00000032114) #10 ENSOANG00000014322 #17 ENSOANG00000046212 ENSOANG00000037001 ENSOANG00000041605 TFAP2D (ENSOANG00000003129) #21 TFAP2B (ENSOANG00000003130) #22 PKHD1 (ENSOANG00000003131) #23 MCM3 (ENSOANG00000039131) #26 ENSOANG00000003133 #24 PAQR8 (ENSOANG00000003985) #27 EFHC1 (ENSOANG00000003986) #28 TRAM2 (ENSOANG00000020088) #29 ENSOANG00000003988 ENSOANG00000042936 GRPEL2 (ENSOANG00000011040) PCYOX1L (ENSOANG00000013478) ENSOANG00000013479 CSNK1A1 (ENSOANG00000002863) ARHGEF37 (ENSOANG00000039639) PPARGC1B (ENSOANG00000009368) PDE6A (ENSOANG00000009367) Sauria ANCESTRAL SPECIES 1 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162362 #17 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00940000156439.s #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00710000108307 ENSGT01040000244791 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097 Lepidosauria ANCESTRAL SPECIES ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00940000156439.s #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00710000108307 ENSGT00940000162362 #17 ENSGT00940000156439.r.b #10 ENSGT00950000182844.b.a #9 ENSGT00940000162510 #8 ENSGT00950000183133.f.h ENSGT00390000005599 ENSGT00390000011892 ENSGT01100000263524.D Episquamata ANCESTRAL SPECIES ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00940000156439.s #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00710000108307 ENSGT00940000162362.b #17 ENSGT00950000182844.b.a #9 ENSGT00940000162510 #8 ENSGT00950000183133.f.h ENSGT00390000005599 ENSGT00390000011892 ENSGT01100000263524.D ENSGT00550000074922 Laterata ANCESTRAL SPECIES 13 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00940000156439.s #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a.c #28 ENSGT00510000046470.a.b #29 ENSGT00710000108307 ENSGT00940000162362.a.a #17 ENSGT00940000156439.r.b #10 ENSGT00950000182844.b.a #9 ENSGT00940000162510 #8 ENSGT00950000183133.f.h ENSGT00390000005599 ENSGT00390000011892 ENSGT01100000263524.D Common wall lizard MODERN SPECIES 11 ENSPMRG00000006857 MDH1 (ENSPMRG00000006861) WDPCP (ENSPMRG00000006873) OTX1 (ENSPMRG00000006891) EHBP1 (ENSPMRG00000006897) TMEM17 (ENSPMRG00000006917) ENSPMRG00000006943 COMMD1 (ENSPMRG00000006951) CCT4 (ENSPMRG00000006964) FAM161A (ENSPMRG00000006987) ENSPMRG00000006997 #10 ENSPMRG00000007046 #10 ENSPMRG00000007239 #14 ENSPMRG00000007258 #10 TFAP2D (ENSPMRG00000007272) #21 TFAP2B (ENSPMRG00000007290) #22 ENSPMRG00000007318 PKHD1 (ENSPMRG00000007352) #23 IL17F (ENSPMRG00000002301) #25 MCM3 (ENSPMRG00000002305) #26 ENSPMRG00000002318 ENSPMRG00000002325 PAQR8 (ENSPMRG00000002330) #27 ENSPMRG00000002354 #28 TRAM2 (ENSPMRG00000002403) #29 ENSPMRG00000002457 #28 ENSPMRG00000002460 ENSPMRG00000002463 RHAG (ENSPMRG00000002467) #9 ENSPMRG00000002473 #8 ENSPMRG00000002482 #8 Argentine black and white tegu MODERN SPECIES 54 UGP2 (ENSSMRG00000005430) MDH1 (ENSSMRG00000005439) WDPCP (ENSSMRG00000005490) OTX1 (ENSSMRG00000005510) EHBP1 (ENSSMRG00000005524) TMEM17 (ENSSMRG00000005554) ENSSMRG00000005599 B3GNT2 (ENSSMRG00000005605) COMMD1 (ENSSMRG00000005611) CCT4 (ENSSMRG00000005614) FAM161A (ENSSMRG00000005692) ENSSMRG00000005739 #10 ENSSMRG00000005909 #10 ENSSMRG00000005927 #10 TFAP2D (ENSSMRG00000005974) #21 TFAP2B (ENSSMRG00000005975) #22 ENSSMRG00000005977 IL17F (ENSSMRG00000005978) #25 MCM3 (ENSSMRG00000005991) #26 ENSSMRG00000005995 #27 EFHC1 (ENSSMRG00000005996) #28 TRAM2 (ENSSMRG00000006014) #29 ENSSMRG00000006016 ENSSMRG00000006037 #17 CRISP3 (ENSSMRG00000006050) #14 ENSSMRG00000006058 #17 ENSSMRG00000006060 #10 RHAG (ENSSMRG00000006066) #9 ENSSMRG00000006082 MMUT (ENSSMRG00000006094) ENSSMRG00000006098 Toxicofera ANCESTRAL SPECIES ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00940000162362.b #17 ENSGT00950000182844.b.a #9 ENSGT00940000162510 #8 ENSGT00950000183133.f.h ENSGT00390000005599 ENSGT00390000011892 ENSGT01100000263524.D ENSGT00550000074922 ENSGT00390000010738 Elapidae ANCESTRAL SPECIES ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a.d #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00950000182844.b.a #9 ENSGT00940000162510.t.b #8 ENSGT00940000162510.t.a #8 ENSGT00940000162510.s.b #8 ENSGT00940000162510.s.a.a.a.b #8 ENSGT00940000162510.s.a.a.a.a.a #8 ENSGT00940000162510.s.a.b.b #8 ENSGT00940000162510.s.a.a.b #8 ENSGT00950000183133.f.h Indian cobra MODERN SPECIES UGP2 (ENSNNAG00000013510) MDH1 (ENSNNAG00000013583) WDPCP (ENSNNAG00000013610) OTX1 (ENSNNAG00000013651) EHBP1 (ENSNNAG00000013729) TMEM17 (ENSNNAG00000014018) B3GNT2 (ENSNNAG00000014031) ENSNNAG00000014035 ENSNNAG00000014050 CCT4 (ENSNNAG00000014059) FAM161A (ENSNNAG00000014113) ENSNNAG00000014151 #10 ENSNNAG00000014282 #10 ENSNNAG00000014300 ENSNNAG00000014311 TFAP2B (ENSNNAG00000014323) #22 PKHD1 (ENSNNAG00000014363) #23 IL17F (ENSNNAG00000014489) #25 MCM3 (ENSNNAG00000014512) #26 PAQR8 (ENSNNAG00000014541) #27 EFHC1 (ENSNNAG00000014556) #28 TRAM2 (ENSNNAG00000014579) #29 RHAG (ENSNNAG00000014592) #9 ENSNNAG00000014612 #8 ENSNNAG00000014629 #8 ENSNNAG00000000226 #8 ENSNNAG00000000234 #8 ENSNNAG00000000238 #8 ENSNNAG00000000271 #8 ENSNNAG00000000364 #8 ENSNNAG00000000401 #8 Elapidae_a ANCESTRAL SPECIES 6 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a.d #10 ENSGT00940000162013.p #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00950000182844.b.a #9 ENSGT00940000162510.t.b #8 ENSGT00940000162510.t.a #8 ENSGT00940000162510.s.b #8 ENSGT00940000162510.s.a.a.a.b #8 ENSGT00940000162510.s.a.a.a.a.a.b #8 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000156439.r.a.d #10 ENSGT00940000162013.p #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618 #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT00950000182844.b.a #9 ENSGT00940000162510.t.b #8 ENSGT00940000162510.t.a #8 ENSGT00940000162510.s.b #8 ENSGT00940000162510.s.a.a.a.b #8 ENSGT00940000162510.s.a.a.a.a.a.b #8 Eastern brown snake MODERN SPECIES 56 UGP2 (ENSPTXG00000006524) MDH1 (ENSPTXG00000006523) ENSPTXG00000006522 OTX1 (ENSPTXG00000006521) EHBP1 (ENSPTXG00000006520) TMEM17 (ENSPTXG00000006519) B3GNT2 (ENSPTXG00000006518) COMMD1 (ENSPTXG00000006517) CCT4 (ENSPTXG00000006490) ENSPTXG00000006489 ENSPTXG00000006487 ENSPTXG00000006485 #10 ENSPTXG00000006483 ENSPTXG00000006481 #14 TFAP2D (ENSPTXG00000006480) #21 TFAP2B (ENSPTXG00000006479) #22 IL17F (ENSPTXG00000006464) #25 MCM3 (ENSPTXG00000006453) #26 EFHC1 (ENSPTXG00000006452) #28 TRAM2 (ENSPTXG00000006451) #29 ENSPTXG00000006448 #9 ENSPTXG00000006447 ENSPTXG00000006444 #8 ENSPTXG00000006003 #8 ENSPTXG00000006002 #8 Mainland tiger snake MODERN SPECIES 177 ENSNSUG00000003265 TFAP2D (ENSNSUG00000003267) #21 TFAP2B (ENSNSUG00000003274) #22 PKHD1 (ENSNSUG00000003277) #23 IL17F (ENSNSUG00000003284) #25 MCM3 (ENSNSUG00000003293) #26 PAQR8 (ENSNSUG00000003301) #27 EFHC1 (ENSNSUG00000003302) #28 TRAM2 (ENSNSUG00000003305) #29 ENSNSUG00000003316 #9 ENSNSUG00000003318 #8 ENSNSUG00000003319 #8 ENSNSUG00000003324 #8 ENSNSUG00000003326 #8 Blue-lipped sea krait MODERN SPECIES 3633 TFAP2B (ENSLLTG00000000271) #22 Lizard MODERN SPECIES ENSACAG00000005852 WDPCP (ENSACAG00000005832) OTX1 (ENSACAG00000005818) EHBP1 (ENSACAG00000005744) ENSACAG00000037825 ENSACAG00000037410 ENSACAG00000040766 B3GNT2 (ENSACAG00000005727) COMMD1 (ENSACAG00000005706) ENSACAG00000034625 CCT4 (ENSACAG00000005569) FAM161A (ENSACAG00000005568) CRISP3 (ENSACAG00000005469) #10 ENSACAG00000005354 #10 TFAP2D (ENSACAG00000005336) #21 TFAP2B (ENSACAG00000005251) #22 IL17F (ENSACAG00000005245) #25 MCM3 (ENSACAG00000005146) #26 EFHC1 (ENSACAG00000005118) #28 TRAM2 (ENSACAG00000005070) #29 YBEY (ENSACAG00000005066) MCM3AP (ENSACAG00000004980) LSS (ENSACAG00000004914) SPATC1L (ENSACAG00000042410) FTCD (ENSACAG00000004847) COL6A2 (ENSACAG00000004843) ENSACAG00000004735 ENSACAG00000036057 ENSACAG00000043473 ENSACAG00000004607 RAB17 (ENSACAG00000004554) tuatara MODERN SPECIES 1188 ENSSPUG00000017565 ENSSPUG00000017670 #14 ENSSPUG00000017951 #14 TFAP2D (ENSSPUG00000018162) #21 TFAP2B (ENSSPUG00000018170) #22 PKHD1 (ENSSPUG00000018228) #23 ENSSPUG00000018359 ANKRD66 (ENSSPUG00000018380) PLA2G7 (ENSSPUG00000018383) CYP39A1 (ENSSPUG00000018412) GPCPD1 (ENSSPUG00000018485) CRLS1 (ENSSPUG00000018506) Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000160171 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.f.a #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01030000235368 ENSGT01030000235367 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 ENSGT00940000159097 Archosauria ANCESTRAL SPECIES 3 ENSGT00940000160171 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510 #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.e #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235368 ENSGT01030000235367 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 Aves ANCESTRAL SPECIES 10 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 Neognathae ANCESTRAL SPECIES 2 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710 Galloanserae ANCESTRAL SPECIES 2 ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710 Anatidae ANCESTRAL SPECIES ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710 Duck MODERN SPECIES 21 SLC25A27 (ENSAPLG00000013008) TDRD6 (ENSAPLG00000021604) PLA2G7 (ENSAPLG00000012546) IMP3 (ENSAPLG00000016868) ENSAPLG00000005460 ENSAPLG00000004740 ADGRF5 (ENSAPLG00000004634) ENSAPLG00000019835 TNFRSF21 (ENSAPLG00000003358) ENSAPLG00000015871 #8 ENSAPLG00000015676 #8 RHAG (ENSAPLG00000015305) #9 CRISP2 (ENSAPLG00000018429) #10 CRISP3 (ENSAPLG00000014850) #14 TFAP2D (ENSAPLG00000014639) #21 TFAP2B (ENSAPLG00000013905) #22 ENSAPLG00000016671 PKHD1 (ENSAPLG00000013410) #23 ENSAPLG00000028302 #25 ENSAPLG00000013357 #25 MCM3 (ENSAPLG00000013058) #26 PAQR8 (ENSAPLG00000001301) #27 EFHC1 (ENSAPLG00000012873) #28 TRAM2 (ENSAPLG00000012648) #29 ENSAPLG00000012580 ENSAPLG00000001297 ENSAPLG00000027564 ENSAPLG00000027595 ENSAPLG00000012287 ENSAPLG00000012251 ENSAPLG00000031088 Pink-footed goose MODERN SPECIES 47 CLIC5 (ENSABRG00000003150) RUNX2 (ENSABRG00000003191) SUPT3H (ENSABRG00000003314) CDC5L (ENSABRG00000003359) ENSABRG00000003390 ENSABRG00000003415 MMUT (ENSABRG00000003449) CENPQ (ENSABRG00000003478) GLYATL3 (ENSABRG00000003506) ENSABRG00000003534 #8 ENSABRG00000003543 #8 RHAG (ENSABRG00000003580) #9 CRISP2 (ENSABRG00000003618) #10 ENSABRG00000003661 #10 TFAP2D (ENSABRG00000003701) #21 TFAP2B (ENSABRG00000003733) #22 ENSABRG00000003752 PKHD1 (ENSABRG00000003777) #23 ENSABRG00000003911 #25 ENSABRG00000003923 #25 MCM3 (ENSABRG00000003938) #26 PAQR8 (ENSABRG00000003957) #27 EFHC1 (ENSABRG00000003968) #28 TRAM2 (ENSABRG00000003981) #29 XKR5 (ENSABRG00000003990) ENSABRG00000004002 ENSABRG00000004011 ENSABRG00000004022 Phasianidae ANCESTRAL SPECIES 28 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710.b ENSGT00530000067237 Phasianidae_b ANCESTRAL SPECIES 29 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00940000162510.k #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01010000224714 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710.b ENSGT00420000030710.a Turkey DUPLICATION Turkey MODERN SPECIES 11 ENSMGAG00000014220 ENSMGAG00000021776 ENSMGAG00000014212 ENSMGAG00000014213 ENSMGAG00000016469 ENSMGAG00000005535 ENSMGAG00000021529 ENSMGAG00000005531 ENSMGAG00000014222 PAQR8 (ENSMGAG00000015659) #27 ENSMGAG00000014226 #28 TRAM2 (ENSMGAG00000014225) #29 ENSMGAG00000014238 #25 ENSMGAG00000014236 #25 ENSMGAG00000014229 #26 ENSMGAG00000014245 #22 ENSMGAG00000020296 #22 ENSMGAG00000017668 #21 ENSMGAG00000014249 #10 CRISP2 (ENSMGAG00000020479) #10 ENSMGAG00000014257 ENSMGAG00000014251 #8 ENSMGAG00000014250 #9 ENSMGAG00000019876 ENSMGAG00000014261 ENSMGAG00000014259 ENSMGAG00000014263 ENSMGAG00000018734 ENSMGAG00000014265 ENSMGAG00000020465 ENSMGAG00000014267 Turkey MODERN SPECIES 11 ENSMGAG00000021776 ENSMGAG00000014212 ENSMGAG00000014213 ENSMGAG00000016469 ENSMGAG00000005535 ENSMGAG00000021529 ENSMGAG00000005531 ENSMGAG00000014222 PAQR8 (ENSMGAG00000015659) #27 ENSMGAG00000014226 #28 TRAM2 (ENSMGAG00000014225) #29 ENSMGAG00000014238 #25 ENSMGAG00000014236 #25 ENSMGAG00000014229 #26 ENSMGAG00000014245 #22 ENSMGAG00000020296 #22 ENSMGAG00000017668 #21 ENSMGAG00000014249 #10 CRISP2 (ENSMGAG00000020479) #10 ENSMGAG00000014257 ENSMGAG00000014251 #8 ENSMGAG00000014250 #9 ENSMGAG00000019876 ENSMGAG00000014261 ENSMGAG00000014259 ENSMGAG00000014263 ENSMGAG00000018734 ENSMGAG00000014265 ENSMGAG00000020465 ENSMGAG00000014267 ENSMGAG00000014269 Chicken MODERN SPECIES 22 ENPP4 (ENSGALG00010008201) CLIC5 (ENSGALG00010008182) RUNX2 (ENSGALG00010008166) SUPT3H (ENSGALG00010008159) ENSGALG00010008124 CDC5L (ENSGALG00010008120) OPN5L2 (ENSGALG00010008109) MMUT (ENSGALG00010008105) CENPQ (ENSGALG00010008101) CYP2AC2 (ENSGALG00010011879) #8 CYP2AC1 (ENSGALG00010008084) #8 RHAG (ENSGALG00010008074) #9 CRISP2 (ENSGALG00010008061) #10 CRISP2 (ENSGALG00010008054) #14 TFAP2D (ENSGALG00010007848) #21 TFAP2B (ENSGALG00010007845) #22 PKHD1 (ENSGALG00010007934) #23 IL17A (ENSGALG00010007922) #25 IL17F (ENSGALG00010007919) #25 MCM3 (ENSGALG00010007916) #26 PAQR8 (ENSGALG00010007914) #27 EFHC1 (ENSGALG00010007897) #28 ENSGALG00010007890 AvBD14 (ENSGALG00010007881) AvBD4 (ENSGALG00010007875) AvBD3 (ENSGALG00010007870) AvBD1 (ENSGALG00010007863) DEFB4A (ENSGALG00010007860) AvBD6 (ENSGALG00010011870) AvBD7 (ENSGALG00010007851) AvBD8 (ENSGALG00010011455) Japanese quail MODERN SPECIES 21 ENPP4 (ENSCJPG00005002745) CLIC5 (ENSCJPG00005002744) RUNX2 (ENSCJPG00005002743) SUPT3H (ENSCJPG00005002741) CDC5L (ENSCJPG00005002523) ENSCJPG00005002519 ENSCJPG00005002516 MMUT (ENSCJPG00005002514) CENPQ (ENSCJPG00005002511) ENSCJPG00005002508 #8 ENSCJPG00005002505 #8 RHAG (ENSCJPG00005002504) #9 CRISP2 (ENSCJPG00005002502) #10 ENSCJPG00005002501 #10 TFAP2D (ENSCJPG00005002497) #21 TFAP2B (ENSCJPG00005002491) #22 PKHD1 (ENSCJPG00005001217) #23 ENSCJPG00005001139 #25 ENSCJPG00005001135 #25 MCM3 (ENSCJPG00005001126) #26 PAQR8 (ENSCJPG00005001120) #27 EFHC1 (ENSCJPG00005001110) #28 TRAM2 (ENSCJPG00005001100) #29 XKR5 (ENSCJPG00005001097) ENSCJPG00005001086 ENSCJPG00005001077 AvBD5 (ENSCJPG00005001067) AvBD1 (ENSCJPG00005001050) ENSCJPG00005001043 ENSCJPG00005001035 ENSCJPG00005001019 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT00730000114755 ENSGT00530000068084 ENSGT00420000030710 ENSGT00530000067237 Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT01030000235503 ENSGT01030000235483 ENSGT01030000235606.a.b ENSGT00730000114755.d ENSGT00530000068084 ENSGT00420000030710 ENSGT00530000067237 Great tit MODERN SPECIES 22 CLIC5 (ENSPMJG00000012987) RUNX2 (ENSPMJG00000012989) ENSPMJG00000012990 SUPT3H (ENSPMJG00000012991) CDC5L (ENSPMJG00000012995) ENSPMJG00000012996 ENSPMJG00000012997 MMUT (ENSPMJG00000012998) CENPQ (ENSPMJG00000012999) ENSPMJG00000013000 #8 RHAG (ENSPMJG00000013001) #9 CRISP2 (ENSPMJG00000013002) #10 ENSPMJG00000013003 #10 ENSPMJG00000013005 TFAP2D (ENSPMJG00000013006) #21 TFAP2B (ENSPMJG00000013007) #22 PKHD1 (ENSPMJG00000013009) #23 ENSPMJG00000013010 #25 ENSPMJG00000013012 #25 MCM3 (ENSPMJG00000013013) #26 PAQR8 (ENSPMJG00000013015) #27 EFHC1 (ENSPMJG00000013016) #28 TRAM2 (ENSPMJG00000013017) #29 XKR5 (ENSPMJG00000013018) ENSPMJG00000013019 ENSPMJG00000013020 ENSPMJG00000013021 ENSPMJG00000013022 ENSPMJG00000013023 ENSPMJG00000013024 ENSPMJG00000013025 Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171.f ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT01030000235503 ENSGT01030000235483 ENSGT01030000235606.a.b ENSGT01030000235606.a.a ENSGT00530000068084 ENSGT00420000030710 ENSGT00530000067237 Flycatcher MODERN SPECIES 21 ENPP4 (ENSFALG00000001500) ENPP5 (ENSFALG00000023301) CLIC5 (ENSFALG00000001496) RUNX2 (ENSFALG00000001493) SUPT3H (ENSFALG00000012672) CDC5L (ENSFALG00000012688) ENSFALG00000025757 ENSFALG00000012705 MMUT (ENSFALG00000012716) CENPQ (ENSFALG00000012725) ENSFALG00000023033 #8 RHAG (ENSFALG00000012740) #9 CRISP2 (ENSFALG00000012752) #10 ENSFALG00000012765 #10 TFAP2D (ENSFALG00000012770) #21 TFAP2B (ENSFALG00000012772) #22 ENSFALG00000028076 PKHD1 (ENSFALG00000002049) #23 ENSFALG00000002061 #25 ENSFALG00000002066 #25 MCM3 (ENSFALG00000002082) #26 PAQR8 (ENSFALG00000014850) #27 EFHC1 (ENSFALG00000002100) #28 TRAM2 (ENSFALG00000027316) #29 ENSFALG00000025192 ENSFALG00000002122 ENSFALG00000024001 ENSFALG00000027745 ENSFALG00000027123 ENSFALG00000023742 ENSFALG00000023902 Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171.f ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT01030000235503 ENSGT01030000235483 ENSGT01030000237530 ENSGT01030000235606.a.a ENSGT00730000114755.d ENSGT00530000068084 ENSGT00420000030710 Passeroidea ANCESTRAL SPECIES ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171.f ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT01030000235503 ENSGT01030000235483 ENSGT01030000237530 ENSGT01030000235606.a.a ENSGT00730000114755.d ENSGT00530000068084 ENSGT00420000030710 Zebra finch MODERN SPECIES 23 ENPP5 (ENSTGUG00000023070) ENPP4 (ENSTGUG00000013245) CLIC5 (ENSTGUG00000023278) RUNX2 (ENSTGUG00000023364) SUPT3H (ENSTGUG00000013250) CDC5L (ENSTGUG00000013251) ENSTGUG00000023300 ENSTGUG00000013256 MMUT (ENSTGUG00000013257) ENSTGUG00000023639 ENSTGUG00000013260 #8 RHAG (ENSTGUG00000013262) #9 CRISP2 (ENSTGUG00000024271) #10 ENSTGUG00000013263 #10 TFAP2D (ENSTGUG00000013264) #21 TFAP2B (ENSTGUG00000022691) #22 PKHD1 (ENSTGUG00000013268) #23 ENSTGUG00000013272 #25 ENSTGUG00000013274 #25 MCM3 (ENSTGUG00000013275) #26 PAQR8 (ENSTGUG00000020284) #27 EFHC1 (ENSTGUG00000013278) #28 TRAM2 (ENSTGUG00000013281) #29 XKR5 (ENSTGUG00000024722) ENSTGUG00000020291 ENSTGUG00000013282 ENSTGUG00000024610 ENSTGUG00000025056 ENSTGUG00000020849 ENSTGUG00000020966 ENSTGUG00000026460 Common canary MODERN SPECIES 1 ENPP5 (ENSSCAG00000014161) ENPP4 (ENSSCAG00000014158) CLIC5 (ENSSCAG00000014165) RUNX2 (ENSSCAG00000014170) SUPT3H (ENSSCAG00000014193) CDC5L (ENSSCAG00000014215) ENSSCAG00000014225 ENSSCAG00000014230 MMUT (ENSSCAG00000014237) CENPQ (ENSSCAG00000014246) ENSSCAG00000014256 #8 RHAG (ENSSCAG00000014264) #9 CRISP2 (ENSSCAG00000014273) #10 ENSSCAG00000014279 #10 TFAP2D (ENSSCAG00000014286) #21 TFAP2B (ENSSCAG00000014289) #22 PKHD1 (ENSSCAG00000014315) #23 ENSSCAG00000014390 #25 ENSSCAG00000014404 #25 MCM3 (ENSSCAG00000014410) #26 PAQR8 (ENSSCAG00000014415) #27 ENSSCAG00000014417 EFHC1 (ENSSCAG00000014419) #28 TRAM2 (ENSSCAG00000014440) #29 ENSSCAG00000014442 ENSSCAG00000014444 ENSSCAG00000014445 ENSSCAG00000014449 ENSSCAG00000014447 ENSSCAG00000014450 ENSSCAG00000014454 Medium ground finch MODERN SPECIES 80 ENSGFOG00000001014 RUNX2 (ENSGFOG00000001030) SUPT3H (ENSGFOG00000001051) CDC5L (ENSGFOG00000001077) ENSGFOG00000001103 ENSGFOG00000001113 MMUT (ENSGFOG00000001120) CENPQ (ENSGFOG00000001131) ENSGFOG00000001156 #8 RHAG (ENSGFOG00000001210) #9 CRISP2 (ENSGFOG00000001225) #10 ENSGFOG00000001233 #10 TFAP2D (ENSGFOG00000001241) #21 TFAP2B (ENSGFOG00000001259) #22 ENSGFOG00000001279 PKHD1 (ENSGFOG00000001306) #23 ENSGFOG00000001354 #25 ENSGFOG00000001374 #25 MCM3 (ENSGFOG00000001382) #26 ENSGFOG00000001399 #28 ENSGFOG00000001414 #28 TRAM2 (ENSGFOG00000001428) #29 XKR5 (ENSGFOG00000001438) ENSGFOG00000001448 ENSGFOG00000001454 ENSGFOG00000001460 ENSGFOG00000001465 ENSGFOG00000001472 ENSGFOG00000001478 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00600000085213 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00940000162510.l #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.e.a #25 ENSGT00940000156618.e.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235503 ENSGT01030000235483 ENSGT01030000235606 ENSGT00960000189777 ENSGT00730000114755.a ENSGT00530000068084 Golden eagle MODERN SPECIES 6 RCAN2 (ENSACCG00020008131) ENPP5 (ENSACCG00020008124) ENPP4 (ENSACCG00020008118) CLIC5 (ENSACCG00020008109) RUNX2 (ENSACCG00020008097) SUPT3H (ENSACCG00020008080) CDC5L (ENSACCG00020008066) ENSACCG00020009222 ENSACCG00020009214 MMUT (ENSACCG00020009201) CENPQ (ENSACCG00020009178) ENSACCG00020009158 #8 RHAG (ENSACCG00020009143) #9 CRISP2 (ENSACCG00020009125) #10 TFAP2D (ENSACCG00020009109) #21 TFAP2B (ENSACCG00020009084) #22 PKHD1 (ENSACCG00020009046) #23 ENSACCG00020008978 #25 ENSACCG00020008950 #25 MCM3 (ENSACCG00020008930) #26 PAQR8 (ENSACCG00020008905) #27 EFHC1 (ENSACCG00020008887) #28 TRAM2 (ENSACCG00020008859) #29 XKR5 (ENSACCG00020008835) ENSACCG00020008813 ENSACCG00020008805 ENSACCG00020008784 ENSACCG00020008771 ENSACCG00020008760 ENSACCG00020008743 ENSACCG00020008737 Kakapo MODERN SPECIES 23 ENPP4 (ENSSHBG00005011788) CLIC5 (ENSSHBG00005011817) RUNX2 (ENSSHBG00005011855) SUPT3H (ENSSHBG00005011873) ENSSHBG00005011887 CDC5L (ENSSHBG00005011911) ENSSHBG00005011936 ENSSHBG00005011951 MMUT (ENSSHBG00005011965) CENPQ (ENSSHBG00005011988) ENSSHBG00005012003 #8 RHAG (ENSSHBG00005012046) #9 CRISP2 (ENSSHBG00005012078) #10 ENSSHBG00005012112 #10 TFAP2D (ENSSHBG00005012161) #21 TFAP2B (ENSSHBG00005012191) #22 ENSSHBG00005012349 #25 ENSSHBG00005012367 #25 MCM3 (ENSSHBG00005012482) #26 PAQR8 (ENSSHBG00005012766) #27 EFHC1 (ENSSHBG00005012808) #28 TRAM2 (ENSSHBG00005012874) #29 XKR5 (ENSSHBG00005012889) ENSSHBG00005012911 ENSSHBG00005012931 ENSSHBG00005012961 ENSSHBG00005013039 ENSSHBG00005013046 ENSSHBG00005013058 ENSSHBG00005013080 ENSSHBG00005013104 African ostrich MODERN SPECIES 677 RHAG (ENSSCUG00000008452) #9 CRISP2 (ENSSCUG00000008449) #10 ENSSCUG00000008446 #10 TFAP2D (ENSSCUG00000008443) #21 TFAP2B (ENSSCUG00000008439) #22 ENSSCUG00000008436 PKHD1 (ENSSCUG00000008417) #23 ENSSCUG00000008406 #25 ENSSCUG00000008402 #25 MCM3 (ENSSCUG00000008397) #26 PAQR8 (ENSSCUG00000008393) #27 EFHC1 (ENSSCUG00000008389) #28 TRAM2 (ENSSCUG00000008384) #29 XKR5 (ENSSCUG00000008381) ENSSCUG00000008377 ENSSCUG00000008376 ENSSCUG00000008374 ENSSCUG00000008372 Australian saltwater crocodile MODERN SPECIES 38 SUPT3H (ENSCPRG00005001030) CDC5L (ENSCPRG00005001067) ENSCPRG00005001084 MMUT (ENSCPRG00005001087) CENPQ (ENSCPRG00005001090) GLYATL3 (ENSCPRG00005001102) ENSCPRG00005001147 #8 RHAG (ENSCPRG00005001518) #9 ENSCPRG00005001534 CRISP2 (ENSCPRG00005001568) #10 ENSCPRG00005001610 #10 ENSCPRG00005001719 #10 ENSCPRG00005001748 ENSCPRG00005001766 TFAP2D (ENSCPRG00005001788) #21 TFAP2B (ENSCPRG00005001794) #22 ENSCPRG00005001798 PKHD1 (ENSCPRG00005001865) #23 ENSCPRG00005001893 #25 ENSCPRG00005001908 #25 MCM3 (ENSCPRG00005001928) #26 PAQR8 (ENSCPRG00005001965) #27 EFHC1 (ENSCPRG00005001978) #28 TRAM2 (ENSCPRG00005002038) #29 XKR5 (ENSCPRG00005002053) ENSCPRG00005002057 ENSCPRG00005002060 ENSCPRG00005002069 ENSCPRG00005002071 ENSCPRG00005002079 ENSCPRG00005002086 Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000162013 #14 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.f.b #25 ENSGT00940000156618.f.a #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT01030000235368 ENSGT01030000235367 ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.f.b #25 ENSGT00940000156618.f.a #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT00960000188922 ENSGT00990000207928 ENSGT00960000192217 ENSGT01030000235368 ENSGT00980000200519 ENSGT00950000186370 Emydidae ANCESTRAL SPECIES 8 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000183133.f.h ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00940000162013 #14 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.f.b #25 ENSGT00940000156618.f.a #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT00960000188922 painted turtle MODERN SPECIES 2397 ANKRD66 (ENSCPBG00000021658) PLA2G7 (ENSCPBG00000021659) IMP3 (ENSCPBG00000021662) TDRD6 (ENSCPBG00000021664) SLC25A27 (ENSCPBG00000021665) ENSCPBG00000021668 ENSCPBG00000021672 ENPP5 (ENSCPBG00000021673) ENPP4 (ENSCPBG00000021674) CLIC5 (ENSCPBG00000021676) RUNX2 (ENSCPBG00000021680) SUPT3H (ENSCPBG00000021682) SCAMP1 (ENSCPBG00000021684) ENSCPBG00000021687 TFAP2D (ENSCPBG00000021688) #21 TFAP2B (ENSCPBG00000021691) #22 PKHD1 (ENSCPBG00000021692) #23 ENSCPBG00000021703 #25 ENSCPBG00000002351 #25 ENSCPBG00000002473 #25 MCM3 (ENSCPBG00000002873) #26 PAQR8 (ENSCPBG00000002902) #27 EFHC1 (ENSCPBG00000002922) #28 TRAM2 (ENSCPBG00000002965) #29 XKR5 (ENSCPBG00000002982) ENSCPBG00000003006 ENSCPBG00000003028 ENSCPBG00000003054 ENSCPBG00000003079 Three-toed box turtle MODERN SPECIES 15 ENPP4 (ENSTMTG00000007316) CLIC5 (ENSTMTG00000007327) RUNX2 (ENSTMTG00000007345) SUPT3H (ENSTMTG00000007385) CDC5L (ENSTMTG00000007409) ENSTMTG00000007443 MMUT (ENSTMTG00000007460) CENPQ (ENSTMTG00000007473) GLYATL3 (ENSTMTG00000007494) RHAG (ENSTMTG00000007519) #9 CRISP2 (ENSTMTG00000007573) #10 ENSTMTG00000007961 #10 CRISP3 (ENSTMTG00000007986) #14 ENSTMTG00000008013 TFAP2D (ENSTMTG00000008019) #21 TFAP2B (ENSTMTG00000008044) #22 PKHD1 (ENSTMTG00000008105) #23 ENSTMTG00000008721 #25 ENSTMTG00000008740 #25 MCM3 (ENSTMTG00000008814) #26 PAQR8 (ENSTMTG00000009614) #27 EFHC1 (ENSTMTG00000009658) #28 TRAM2 (ENSTMTG00000009801) #29 XKR5 (ENSTMTG00000009831) ENSTMTG00000009872 Testudinidae ANCESTRAL SPECIES 10 ENSGT00940000159767 ENSGT00940000160562 ENSGT00940000158831 ENSGT00940000156406.b ENSGT00940000160171 ENSGT00390000010738 ENSGT00550000074922 ENSGT00940000161979.B ENSGT01100000263524.D ENSGT00390000011892 ENSGT00390000005599 ENSGT00950000182844.b.a #9 ENSGT00940000156439.r.b #10 ENSGT00940000156439.r.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000160697 #23 ENSGT00940000156618.f.b #25 ENSGT00940000156618.f.a #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00710000108307 ENSGT00960000188922 Goode s thornscrub tortoise MODERN SPECIES 17 ENPP4 (ENSGEVG00005010123) CLIC5 (ENSGEVG00005010047) RUNX2 (ENSGEVG00005010022) SUPT3H (ENSGEVG00005009630) CDC5L (ENSGEVG00005009562) ENSGEVG00005009530 ENSGEVG00005009501 MMUT (ENSGEVG00005009448) CENPQ (ENSGEVG00005009413) ENSGEVG00005009242 #8 ENSGEVG00005009050 #8 RHAG (ENSGEVG00005009014) #9 CRISP2 (ENSGEVG00005008958) #10 ENSGEVG00005008897 #10 TFAP2D (ENSGEVG00005008838) #21 TFAP2B (ENSGEVG00005008797) #22 PKHD1 (ENSGEVG00005008582) #23 ENSGEVG00005008539 #25 ENSGEVG00005008475 #25 MCM3 (ENSGEVG00005008431) #26 PAQR8 (ENSGEVG00005008419) #27 EFHC1 (ENSGEVG00005008122) #28 TRAM2 (ENSGEVG00005007985) #29 ENSGEVG00005007962 ENSGEVG00005007927 ENSGEVG00005007902 ENSGEVG00005007883 ENSGEVG00005007864 ENSGEVG00005007854 ENSGEVG00005007835 ENSGEVG00005007821 Abingdon island giant tortoise MODERN SPECIES 2274 RHAG (ENSCABG00000016805) #9 CRISP2 (ENSCABG00000016826) #10 ENSCABG00000016829 #10 TFAP2D (ENSCABG00000016832) #21 TFAP2B (ENSCABG00000016833) #22 Chinese turtle MODERN SPECIES 2172 DCK (ENSPSIG00000014315) MOB1B (ENSPSIG00000014283) ENSPSIG00000014267 CENPQ (ENSPSIG00000014207) ENSPSIG00000014061 #8 RHAG (ENSPSIG00000013778) #9 ENSPSIG00000013188 #17 ENSPSIG00000013152 #10 ENSPSIG00000011704 #10 ENSPSIG00000009967 #10 CRISP3 (ENSPSIG00000008972) #14 ENSPSIG00000008487 #10 ENSPSIG00000008444 #10 ENSPSIG00000008437 TFAP2D (ENSPSIG00000008307) #21 TFAP2B (ENSPSIG00000008002) #22 ENSPSIG00000000897 #23 ENSPSIG00000007951 #25 ENSPSIG00000007604 #25 MCM3 (ENSPSIG00000006428) #26 EFHC1 (ENSPSIG00000006183) #28 TRAM2 (ENSPSIG00000014870) #29 XKR5 (ENSPSIG00000014857) Anura ANCESTRAL SPECIES 37 ENSGT00940000162510.g.b #8 ENSGT00950000182844.b.a #9 ENSGT00940000156439.f.a #10 ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00900000143764 ENSGT00940000160697 #23 ENSGT00940000156618.g.a #25 ENSGT00940000156618.h #25 ENSGT00940000156618.g.b #25 ENSGT01050000244824.B #26 ENSGT00940000159860 #27 ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b ENSGT00940000158680 ENSGT00390000016034 ENSGT00940000153230.B ENSGT00940000158349 ENSGT00940000159864 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000004842 #8 ENSLLEG00000004789 #8 ENSLLEG00000004702 #8 ENSLLEG00000004664 ENSLLEG00000004651 #8 ENSLLEG00000012183 #8 ENSLLEG00000012115 #8 ENSLLEG00000012053 #8 ENSLLEG00000012004 #8 ENSLLEG00000011925 ENSLLEG00000011746 #8 ENSLLEG00000011661 #8 ENSLLEG00000011594 #8 ENSLLEG00000011563 #8 TFAP2D (ENSLLEG00000011441) #21 TFAP2B (ENSLLEG00000011293) #22 ENSLLEG00000011234 ENSLLEG00000011218 ENSLLEG00000011205 ENSLLEG00000011183 PKHD1 (ENSLLEG00000010615) #23 ENSLLEG00000010417 ENSLLEG00000010392 ENSLLEG00000010372 ENSLLEG00000010265 ENSLLEG00000010209 ENSLLEG00000010166 ENSLLEG00000010137 ENSLLEG00000010116 TDRD15 (ENSLLEG00000010039) APOB (ENSLLEG00000009782) Frog MODERN SPECIES 5 cyp2b6 (ENSXETG00000011117) #8 cyp2e1 (ENSXETG00000033380) #8 ENSXETG00000033141 #8 cyp2a13l (ENSXETG00000011104) #8 XB5952314 (ENSXETG00000026927) #8 ENSXETG00000034657 #8 XB5848842 [provisional] (ENSXETG00000026926) #8 rhag (ENSXETG00000011140) #9 ENSXETG00000036278 #14 crisp1.7 (ENSXETG00000011152) #10 ENSXETG00000039459 crispl (ENSXETG00000011148) #10 ENSXETG00000031486 crisp2-like (ENSXETG00000010986) #10 tfap2d (ENSXETG00000032997) #21 tfap2b (ENSXETG00000021674) #22 ENSXETG00000035528 pkhd1 (ENSXETG00000021681) #23 ENSXETG00000037552 ENSXETG00000026914 #25 ENSXETG00000021699 #25 ENSXETG00000042645 #25 ENSXETG00000043603 #25 ENSXETG00000046398 #25 zmcm3 (ENSXETG00000021701) #26 paqr8 (ENSXETG00000046634) #27 efhc1 (ENSXETG00000000659) #28 tram2 (ENSXETG00000044336) #29 xkr5 (ENSXETG00000042442) ctsb (ENSXETG00000000671) fdft1 (ENSXETG00000033587) Coelacanth MODERN SPECIES 445 TFAP2D (ENSLACG00000007917) #21 TFAP2B (ENSLACG00000009501) #22 PKHD1 (ENSLACG00000014664) #23 PBK (ENSLACG00000016950) ESCO2 (ENSLACG00000017000) Actinopterygii ANCESTRAL SPECIES 180 ENSGT00490000043329.a.b ENSGT01030000234527.A.a.a.b ENSGT00940000155459 ENSGT00940000153897.b.a.b ENSGT00940000164272 ENSGT00520000055578.a.b ENSGT00940000153739.a.b.t ENSGT00940000177261 ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00390000016613.d ENSGT00940000156439.c #10 ENSGT00940000167629 ENSGT00950000182844.b.a #9 Reedfish MODERN SPECIES 11 SCAF8 (ENSECRG00000002175) TIAM2 (ENSECRG00000002253) tfb1m (ENSECRG00000002284) CLDN20 (ENSECRG00000002298) NOX3 (ENSECRG00000002409) ENSECRG00000002831 arid1b (ENSECRG00000002888) tmem242 (ENSECRG00000002981) zdhhc14 (ENSECRG00000002997) LGALS8 (ENSECRG00000003017) rab10 (ENSECRG00000003037) GAREM2 (ENSECRG00000003070) hadhab (ENSECRG00000003145) hadhb (ENSECRG00000003179) tfap2d (ENSECRG00000003201) #21 tfap2b (ENSECRG00000003224) #22 ENSECRG00000003255 ENSECRG00000003259 ENSECRG00000003277 #10 CRISP2 (ENSECRG00000003288) #10 CRISP1 (ENSECRG00000003302) #17 rhag (ENSECRG00000003316) #9 si:dkey-119f1.1 (ENSECRG00000003334) GEN1 (ENSECRG00000003354) msgn1 (ENSECRG00000003368) ENSECRG00000003382 kcns3a (ENSECRG00000003399) mocs3 (ENSECRG00000003408) ENSECRG00000003424 ENSECRG00000003433 ENSECRG00000003472 Neopterygii ANCESTRAL SPECIES 60 ENSGT00490000043329.a.b ENSGT01030000234527.A.a.a.b ENSGT00940000155459 ENSGT00940000153897.b.a.b ENSGT00940000164272 ENSGT00520000055578.a.b ENSGT00940000153739.a.b.t ENSGT00940000177261 ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00390000016613.d ENSGT00940000156439.c #10 ENSGT00940000167629 ENSGT00950000182844.b.a #9 ENSGT00730000112900 ENSGT00390000002089.a.a.a ENSGT00940000156484.b ENSGT01030000235236 ENSGT00940000156989 ENSGT00950000182836.b.a.b ENSGT00390000011724 ENSGT00530000064210 ENSGT01030000234620.a.b.b.b ENSGT00390000017528 ENSGT00940000163755 Osteoglossocephalai ANCESTRAL SPECIES 60 ENSGT00940000153897.b.a.a.b ENSGT00940000155459.x.a ENSGT00940000153897.b.a.b ENSGT00940000164272 ENSGT00520000055578.a.b ENSGT00940000153739.a.b.t ENSGT00940000154677.b.a ENSGT00940000177261 ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00390000016613.d ENSGT00940000156439.c #10 ENSGT00940000167629 ENSGT00940000162013 #14 ENSGT00950000182844.b.a #9 ENSGT00730000112900 ENSGT00390000002089.a.a.a ENSGT00940000156484.b ENSGT01030000235236 ENSGT00940000156989 ENSGT00950000182836.b.a.b ENSGT00390000011724 ENSGT00530000064210 ENSGT01030000234620.a.b.b.b ENSGT01100000263524.F Osteoglossiformes ANCESTRAL SPECIES 96 ENSGT00390000002693 ENSGT00490000043329.a.b.g.a.j ENSGT01030000234527.A.a.a.b ENSGT00940000155459.x.a ENSGT00940000153897.b.a.b ENSGT00520000055578.a.b ENSGT00940000153739.a.b.s ENSGT00940000156975.d.b ENSGT00940000177261 ENSGT00940000156975.c ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00900000143764 ENSGT00950000182848.c.b.b.b #22 ENSGT00390000016613.d ENSGT00950000182844.b.a #9 ENSGT00390000002089.a.a.a ENSGT00940000156484.b.d ENSGT01030000235236 ENSGT00940000156989 ENSGT00950000182836.b.a.b ENSGT00390000011724 ENSGT00530000064210 ENSGT01030000234620.a.b.b.b ENSGT01100000263524.F ENSGT00940000157993 ENSGT00390000004172 ENSGT01090000260082.d.b.b ENSGT00940000160610 Asian bonytongue MODERN SPECIES agbl5 (ENSSFOG00015005857) tmem214 (ENSSFOG00015005891) mapre3a (ENSSFOG00015005918) dpysl5a (ENSSFOG00015005937) DNMT3A (ENSSFOG00015006003) dtnbb (ENSSFOG00015006252) hspb9l (ENSSFOG00015006397) ASXL2 (ENSSFOG00015006380) KIF3C (ENSSFOG00015006428) rab10 (ENSSFOG00015027492) GAREM2 (ENSSFOG00015006462) hadhaa (ENSSFOG00015006508) hadhb (ENSSFOG00015006603) tfap2d (ENSSFOG00015006620) #21 ENSSFOG00015027405 tfap2b (ENSSFOG00015006654) #22 ENSSFOG00015006673 rhag (ENSSFOG00015006691) #9 rd3 (ENSSFOG00015027647) slc30a1a (ENSSFOG00015027996) ENSSFOG00015006757 nek2 (ENSSFOG00015006772) ENSSFOG00015027071 lpgat1 (ENSSFOG00015027445) ints7 (ENSSFOG00015006821) dtl (ENSSFOG00015006892) PPP2R5A (ENSSFOG00015006942) opn8c (ENSSFOG00015026570) tagapb (ENSSFOG00015006564) rsph3 (ENSSFOG00015007023) rsph3 (ENSSFOG00015007102) P. kingsleyae MODERN SPECIES 340 tfap2d (ENSPKIG00000021570) #21 tfap2b (ENSPKIG00000021538) #22 ENSPKIG00000021516 ENSPKIG00000021468 rhag (ENSPKIG00000021430) #9 rd3 (ENSPKIG00000021412) slc30a1a (ENSPKIG00000021406) ENSPKIG00000021399 nek2 (ENSPKIG00000021375) lpgat1 (ENSPKIG00000021349) ints7 (ENSPKIG00000021288) dtl (ENSPKIG00000021256) PPP2R5A (ENSPKIG00000021218) tagapb (ENSPKIG00000021199) rsph3 (ENSPKIG00000021155) ezrb (ENSPKIG00000021097) SYTL3 (ENSPKIG00000021064) Clupeocephala ANCESTRAL SPECIES 140 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 Otomorpha ANCESTRAL SPECIES 165 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00530000064185 ENSGT00940000155936.b ENSGT00940000164632.b.b ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000157219.e Otophysi ANCESTRAL SPECIES 55 ENSGT00940000153634.b.b ENSGT00390000017627.a.a.a ENSGT00940000165654 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00980000202516 ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00940000164632.b.b.a ENSGT00940000171406 Cyprinoidei ANCESTRAL SPECIES 100 ENSGT00390000008608 ENSGT00740000116213 ENSGT01100000263662 ENSGT00530000063347.A.b ENSGT00940000154096.b.b.a ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b #29 ENSGT01070000253766.A.a.a.b.a.b ENSGT00940000154798.a.d.b ENSGT00530000063426.b.b ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00980000202516 ENSGT00940000153295.b ENSGT00940000156975.e.a ENSGT00940000153739.a.b.s ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT00520000055570.B.l ENSGT00940000157219.e ENSGT00410000025698.a ENSGT00940000153433.B.a.a ENSGT00940000165654 ENSGT00390000017627.a.a.a ENSGT00940000153634.b.b ENSGT00940000156549.a.b ENSGT00940000159745 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 314 ENSGT00530000063426.b.b.f ENSGT00530000063834.e.b.d ENSGT00940000154677.b.b.d ENSGT01030000234626.A.b.c ENSGT01100000263662.a ENSGT00530000063347.A.b.g.b ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b.j #29 ENSGT00940000154798.a.d.b.b.b ENSGT00530000063426.b.b.e ENSGT00530000063834.e.b.c ENSGT00940000154677.b.b.c ENSGT01030000234626.A.b.d ENSGT00950000182848.d.b #21 ENSGT00950000182848.c.b.b.b.c #22 ENSGT00940000153295.b.l ENSGT00940000156975.e.a.d ENSGT00940000153739.a.b.s.c ENSGT00940000153897.b.b.f ENSGT00940000155459.x.a.c ENSGT00520000055570.B.l.d ENSGT00940000157219.e.l ENSGT00410000025698.a.f ENSGT00940000153433.B.a.a.a ENSGT00390000017627.a.a.a.b ENSGT00940000153634.b.b.d ENSGT00940000156549.a.b.b ENSGT00940000159745.b.a ENSGT00940000155693.a.a.b Goldfish MODERN SPECIES 645 ENSCARG00000025987 ENSCARG00000025976 efhc1 (ENSCARG00000025950) #28 tram2 (ENSCARG00000025886) #29 ENSCARG00000025869 prep (ENSCARG00000025628) GAREM2 (ENSCARG00000025515) hadhaa (ENSCARG00000025436) hadhb (ENSCARG00000025176) ENSCARG00000025113 tfap2d (ENSCARG00000025057) #21 tfap2b (ENSCARG00000025023) #22 lin28b (ENSCARG00000025002) rab10 (ENSCARG00000024986) KIF3C (ENSCARG00000024977) dtnba (ENSCARG00000024814) dnmt3aa (ENSCARG00000024559) ENSCARG00000024497 ENSCARG00000024422 si:ch73-21k16.4 (ENSCARG00000024384) esrrgb (ENSCARG00000024358) fez2b (ENSCARG00000024333) wdr26b (ENSCARG00000024156) ENSCARG00000024124 batf (ENSCARG00000024033) jdp2b (ENSCARG00000069561) Cyprininae_a ANCESTRAL SPECIES 297 ENSGT00390000008608 ENSGT01100000263662.a ENSGT00530000063347.A.b.g.b ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063528.A.a #28 ENSGT00510000046470.a.b.j #29 ENSGT00940000154798.a.d.b.a ENSGT00530000063426.b.b.e ENSGT00530000063834.e.b.c ENSGT00940000154677.b.b.c ENSGT01030000234626.A.b.d ENSGT00950000182848.d.b #21 ENSGT00950000182848.c.b.b.b.c #22 ENSGT00940000153295.b.l ENSGT00940000156975.e.a.d ENSGT00940000153739.a.b.s.c ENSGT00940000153897.b.b.f ENSGT00940000155459.x.a.c ENSGT00520000055570.B.l.d ENSGT00940000157219.e.l ENSGT00410000025698.a.f ENSGT00940000153433.B.a.a.a ENSGT00390000017627.a.a.a.b ENSGT00940000153634.b.b.d ENSGT00940000156549.a.b.b ENSGT00940000159745.b.a ENSGT00940000155693.a.a.b ENSGT00940000164930.b.b Common carp reference MODERN SPECIES 28 xrn2 (ENSCCRG00000041635) nkx2.4b (ENSCCRG00000041582) nkx2.2b (ENSCCRG00000041579) PAX1 (ENSCCRG00000041349) ENSCCRG00000041541 ENSCCRG00000008668 ENSCCRG00000065663 efhc1 (ENSCCRG00000028193) #28 tram2 (ENSCCRG00000028190) #29 prep (ENSCCRG00000010847) ENSCCRG00000010851 GAREM2 (ENSCCRG00000010843) hadhaa (ENSCCRG00000074806) hadhb (ENSCCRG00000010774) tfap2d (ENSCCRG00000025627) #21 tfap2b (ENSCCRG00000078327) #22 lin28b (ENSCCRG00000063422) RAB10 (ENSCCRG00000082614) KIF3C (ENSCCRG00000043861) dtnba (ENSCCRG00000074769) dnmt3aa (ENSCCRG00000012465) ENSCCRG00000012420 ENSCCRG00000012411 si:ch73-21k16.4 (ENSCCRG00000080993) esrrgb (ENSCCRG00000012875) fez2b (ENSCCRG00000013917) wdr26b (ENSCCRG00000045952) ENSCCRG00000033462 batf (ENSCCRG00000077530) jdp2b (ENSCCRG00000060927) fosab (ENSCCRG00000072619) Golden-line barbel MODERN SPECIES 396 ENSSGRG00000041849 ENSSGRG00000041853 prep (ENSSGRG00000041858) GAREM2 (ENSSGRG00000041875) hadhaa (ENSSGRG00000041894) hadhb (ENSSGRG00000042205) tfap2d (ENSSGRG00000042501) #21 tfap2b (ENSSGRG00000042505) #22 lin28b (ENSSGRG00000042506) rab10 (ENSSGRG00000042507) KIF3C (ENSSGRG00000042512) dtnba (ENSSGRG00000042521) dnmt3aa (ENSSGRG00000043238) ENSSGRG00000044366 si:ch73-21k16.4 (ENSSGRG00000044564) esrrgb (ENSSGRG00000044565) fez2b (ENSSGRG00000044568) wdr26b (ENSSGRG00000044569) batf (ENSSGRG00000044571) jdp2b (ENSSGRG00000044572) ENSSGRG00000044574 fosab (ENSSGRG00000044575) tmed10 (ENSSGRG00000044579) Cyprininae ANCESTRAL SPECIES 198 ENSGT00950000182848.d.a #21 ENSGT00950000182848.c.b.b.b.d #22 ENSGT00980000202516 ENSGT00940000153295.b.k ENSGT00940000156975.e.a.c ENSGT00940000153739.a.b.s.d ENSGT00940000153897.b.b.e ENSGT00940000155459.x.a.d ENSGT00520000055570.B.l.c ENSGT00940000157219.e.k ENSGT00410000025698.a.e ENSGT00940000153433.B.a.a.b ENSGT00390000017627.a.a.a.a ENSGT00940000153634.b.b.c ENSGT00940000156549.a.b.a ENSGT00940000159745.b.b ENSGT00940000155693.a.a.a Goldfish MODERN SPECIES 12 hsdl1 (ENSCARG00000012196) tbc1d32 (ENSCARG00000012160) MAN1A1 (ENSCARG00000011789) plg (ENSCARG00000010197) ENSCARG00000010140 unc93a (ENSCARG00000010132) TRIB2 (ENSCARG00000010125) IPO13 (ENSCARG00000009286) ENSCARG00000009235 mgst3a (ENSCARG00000009226) prep (ENSCARG00000009153) GAREM2 (ENSCARG00000009137) hadhb (ENSCARG00000006895) tfap2d (ENSCARG00000006815) #21 ENSCARG00000006804 tfap2b (ENSCARG00000006748) #22 lin28b (ENSCARG00000006722) rab10 (ENSCARG00000006707) KIF3C (ENSCARG00000006701) dtnba (ENSCARG00000006540) dnmt3aa (ENSCARG00000005107) GNPAT (ENSCARG00000004999) ENSCARG00000004961 si:ch73-21k16.4 (ENSCARG00000004938) esrrgb (ENSCARG00000004925) fez2b (ENSCARG00000004904) wdr26b (ENSCARG00000004633) ENSCARG00000004465 batf (ENSCARG00000004443) jdp2b (ENSCARG00000004431) fosab (ENSCARG00000004417) Cyprininae_a ANCESTRAL SPECIES 130 ENSGT00740000116213 ENSGT01100000263662.b ENSGT00530000063347.A.b.g.a ENSGT00940000154096.b.b.a.g ENSGT00940000154096.b.b.a.h.b.a ENSGT00510000046470.a.b.i #29 ENSGT01070000253766.A.a.a.b.a.b ENSGT00940000154798.a.d.b.b.a ENSGT00530000063426.b.b.f ENSGT00530000063834.e.b.d ENSGT00940000154677.b.b.d ENSGT01030000234626.A.b.c ENSGT00950000182848.d.a #21 ENSGT00950000182848.c.b.b.b.d #22 ENSGT00940000153295.b.k ENSGT00940000156975.e.a.c ENSGT00940000153739.a.b.s.d ENSGT00940000153897.b.b.e ENSGT00940000155459.x.a.d ENSGT00520000055570.B.l.c ENSGT00940000157219.e.k ENSGT00410000025698.a.e ENSGT00940000153433.B.a.a.b ENSGT00390000017627.a.a.a.a ENSGT00940000153634.b.b.c ENSGT00940000156549.a.b.a ENSGT00940000159745.b.b ENSGT00940000155693.a.a.a ENSGT00940000164930.b.a Common carp reference MODERN SPECIES 34 nkx2.4b (ENSCCRG00000012144) nkx2.2b (ENSCCRG00000012145) PAX1 (ENSCCRG00000034722) ENSCCRG00000034744 ENSCCRG00000077241 ENSCCRG00000028238 ENSCCRG00000076012 tram2 (ENSCCRG00000004112) #29 xkr5a (ENSCCRG00000010765) prep (ENSCCRG00000010038) ENSCCRG00000023759 GAREM2 (ENSCCRG00000010023) hadhaa (ENSCCRG00000010021) hadhb (ENSCCRG00000055821) tfap2d (ENSCCRG00000003096) #21 tfap2b (ENSCCRG00000003128) #22 rab10 (ENSCCRG00000043765) lin28b (ENSCCRG00000043756) ENSCCRG00000079344 dtnba (ENSCCRG00000058037) dnmt3aa (ENSCCRG00000058953) ENSCCRG00000013654 ENSCCRG00000012939 si:ch73-21k16.4 (ENSCCRG00000012895) esrrgb (ENSCCRG00000053761) fez2b (ENSCCRG00000045991) wdr26b (ENSCCRG00000013666) ENSCCRG00000033792 ENSCCRG00000033794 jdp2b (ENSCCRG00000033796) ENSCCRG00000033798 Golden-line barbel MODERN SPECIES 167 mgst3a (ENSSGRG00000054849) ENSSGRG00000054846 IPO13 (ENSSGRG00000054790) ENSSGRG00000054758 efhc1 (ENSSGRG00000054756) #28 xkr5a (ENSSGRG00000054722) ENSSGRG00000054719 prep (ENSSGRG00000054676) GAREM2 (ENSSGRG00000054673) hadhaa (ENSSGRG00000054647) hadhb (ENSSGRG00000054555) tfap2d (ENSSGRG00000054518) #21 tfap2b (ENSSGRG00000054508) #22 lin28b (ENSSGRG00000054505) rab10 (ENSSGRG00000054493) KIF3C (ENSSGRG00000054489) ENSSGRG00000054487 dtnba (ENSSGRG00000053980) dnmt3aa (ENSSGRG00000053690) GNPAT (ENSSGRG00000053661) ENSSGRG00000053549 si:ch73-21k16.4 (ENSSGRG00000053536) esrrgb (ENSSGRG00000053535) fez2b (ENSSGRG00000053533) wdr26b (ENSSGRG00000053410) ENSSGRG00000053384 batf (ENSSGRG00000053373) jdp2b (ENSSGRG00000053372) Zebrafish MODERN SPECIES 12 ENSDARG00000106343 ENSDARG00000079997 insm1a (ENSDARG00000091756) ENSDARG00000100162 ENSDARG00000099804 IPO13 (ENSDARG00000060618) ENSDARG00000067927 tram2 (ENSDARG00000030092) #29 xkr5a (ENSDARG00000103017) efhc1 (ENSDARG00000009743) #28 prep (ENSDARG00000057151) GAREM2 (ENSDARG00000073933) hadhaa (ENSDARG00000057128) hadhb (ENSDARG00000102055) tfap2d (ENSDARG00000023272) #21 tfap2b (ENSDARG00000012667) #22 ENSDARG00000116759 lin28b (ENSDARG00000052511) rab10 (ENSDARG00000046106) KIF3C (ENSDARG00000017162) dtnba (ENSDARG00000077694) ENSDARG00000096708 ENSDARG00000091243 ENSDARG00000096715 ENSDARG00000089158 dnmt3aa (ENSDARG00000005394) GNPAT (ENSDARG00000078770) ENSDARG00000103380 GPATCH2 (ENSDARG00000101260) esrrgb (ENSDARG00000011696) ENSDARG00000041375 Characiphysae ANCESTRAL SPECIES 167 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00940000177261 ENSGT00940000156975.f ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00980000202516 ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00390000009415.a.a ENSGT00940000155936.a.b ENSGT00940000164632.b.b.a ENSGT00940000171406 Channel catfish MODERN SPECIES 11 ENSIPUG00000014006 ENSIPUG00000013997 ENSIPUG00000013989 ENSIPUG00000013982 ENSIPUG00000013966 ENSIPUG00000013911 ENSIPUG00000013899 ENSIPUG00000013879 ENSIPUG00000013856 KIF3C (ENSIPUG00000013843) RAB10 (ENSIPUG00000013780) GAREM2 (ENSIPUG00000013762) hadha (ENSIPUG00000013705) HADHB (ENSIPUG00000013604) tfap2d (ENSIPUG00000013571) #21 tfap2b (ENSIPUG00000013550) #22 ENSIPUG00000013539 lin28b (ENSIPUG00000013520) prep (ENSIPUG00000013489) xkr5 (ENSIPUG00000013477) tram2 (ENSIPUG00000013446) #29 efhc1 (ENSIPUG00000013427) #28 ENSIPUG00000013406 mrpl19 (ENSIPUG00000013395) ENSIPUG00000013382 ENSIPUG00000013369 ENSIPUG00000013363 ENSIPUG00000013349 ENSIPUG00000013341 ENSIPUG00000013333 ENSIPUG00000013319 Characiphysae_b ANCESTRAL SPECIES 175 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00940000177261 ENSGT00940000156975.f ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ENSGT00940000164632.b.b.a ENSGT00940000171406 Characoidei ANCESTRAL SPECIES 206 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00940000177261 ENSGT00940000156975.f ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ENSGT00940000164632.b.b.a ENSGT00940000171406 Red-bellied piranha MODERN SPECIES 237 ENSPNAG00000012500 si:ch73-21k16.4 (ENSPNAG00000002288) esrrgb (ENSPNAG00000002297) fam228a (ENSPNAG00000002303) ENSPNAG00000012591 KIF3C (ENSPNAG00000002327) rab10 (ENSPNAG00000004858) GAREM2 (ENSPNAG00000002533) hadhaa (ENSPNAG00000004902) hadhb (ENSPNAG00000002582) tfap2d (ENSPNAG00000013179) #21 tfap2b (ENSPNAG00000013199) #22 lin28b (ENSPNAG00000002632) prep (ENSPNAG00000013256) xkr5a (ENSPNAG00000002666) tram2 (ENSPNAG00000013362) #29 efhc1 (ENSPNAG00000002720) #28 ENSPNAG00000013385 mrpl19 (ENSPNAG00000002735) ENSPNAG00000002744 ENSPNAG00000002765 ENSPNAG00000002827 ENSPNAG00000002845 ENSPNAG00000013634 ENSPNAG00000013662 ENSPNAG00000013957 ENSPNAG00000014051 Mexicana tetra MODERN SPECIES 18 LIMD2 (ENSAMXG00000002170) csrnp1b (ENSAMXG00000034148) esrrgb (ENSAMXG00000001660) si:ch73-21k16.4 (ENSAMXG00000001662) LPIN1 (ENSAMXG00000032749) GNPAT (ENSAMXG00000001670) dnmt3aa (ENSAMXG00000001678) dtnba (ENSAMXG00000001714) KIF3C (ENSAMXG00000035039) ENSAMXG00000032714 RAB10 (ENSAMXG00000034090) GAREM2 (ENSAMXG00000001775) hadhaa (ENSAMXG00000001804) hadhb (ENSAMXG00000001836) tfap2d (ENSAMXG00000001854) #21 tfap2b (ENSAMXG00000034876) #22 lin28b (ENSAMXG00000001888) prep (ENSAMXG00000001896) xkr5a (ENSAMXG00000001910) tram2 (ENSAMXG00000042373) #29 efhc1 (ENSAMXG00000001941) #28 ENSAMXG00000041061 mrpl19 (ENSAMXG00000001955) ENSAMXG00000040080 ENSAMXG00000029292 ENSAMXG00000036485 ENSAMXG00000029263 ENSAMXG00000035951 ENSAMXG00000002003 ENSAMXG00000030490 cfap206 (ENSAMXG00000002017) Electric eel MODERN SPECIES 486 gsc (ENSEEEG00000015682) dicer1 (ENSEEEG00000015686) CLMN (ENSEEEG00000015713) tfap2d (ENSEEEG00000015715) #21 tfap2b (ENSEEEG00000015718) #22 smn1 (ENSEEEG00000015722) hspb11 (ENSEEEG00000015723) mccc2 (ENSEEEG00000015725) DAB2 (ENSEEEG00000015732) Clupeiformes ANCESTRAL SPECIES 235 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975.e.a ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b #29 ENSGT00530000063528.A.a #28 ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000157219.e ENSGT00410000025698.a ENSGT00940000156714.b Atlantic herring MODERN SPECIES 6 WASF1 (ENSCHAG00000022646) ENSCHAG00000022652 cdc40 (ENSCHAG00000022664) METTL24 (ENSCHAG00000022690) mapre3b (ENSCHAG00000022700) dpysl5b (ENSCHAG00000022720) dnmt3aa (ENSCHAG00000022822) dtnba (ENSCHAG00000023843) KIF3C (ENSCHAG00000023912) ENSCHAG00000023917 rab10 (ENSCHAG00000023924) GAREM2 (ENSCHAG00000023933) hadhaa (ENSCHAG00000023963) hadhb (ENSCHAG00000024547) tfap2d (ENSCHAG00000025039) #21 tfap2b (ENSCHAG00000025062) #22 lin28b (ENSCHAG00000025081) prep (ENSCHAG00000025117) ENSCHAG00000025209 xkr5a (ENSCHAG00000025213) tram2 (ENSCHAG00000025217) #29 efhc1 (ENSCHAG00000025291) #28 ENSCHAG00000025313 ENSCHAG00000025325 ENSCHAG00000025330 mrpl19 (ENSCHAG00000025333) itsn2a (ENSCHAG00000025403) ENSCHAG00000026148 GNPAT (ENSCHAG00000026157) mxg (ENSCHAG00000026181) LPIN1 (ENSCHAG00000026202) Denticle herring DUPLICATION Denticle herring MODERN SPECIES 5 ENSDCDG00000016329 efhc1 (ENSDCDG00000016326) #28 tram2 (ENSDCDG00000016300) #29 tmem214 (ENSDCDG00000014867) mapre3b (ENSDCDG00000014825) dpysl5b (ENSDCDG00000014792) dnmt3aa (ENSDCDG00000009632) dtnba (ENSDCDG00000005514) KIF3C (ENSDCDG00000005497) rab10 (ENSDCDG00000005493) GAREM2 (ENSDCDG00000005491) hadhaa (ENSDCDG00000005346) hadhb (ENSDCDG00000004689) tfap2d (ENSDCDG00000004624) #21 ENSDCDG00000004622 tfap2b (ENSDCDG00000004613) #22 acadl (ENSDCDG00000004606) acadl (ENSDCDG00000004602) ENSDCDG00000004598 lin28b (ENSDCDG00000004581) prep (ENSDCDG00000004295) ENSDCDG00000004222 xkr5a (ENSDCDG00000004215) saysd1 (ENSDCDG00000004214) ypel5 (ENSDCDG00000004213) ppp1cb (ENSDCDG00000003849) bpnt1 (ENSDCDG00000003806) ZFAND3 (ENSDCDG00000003793) wdr26b (ENSDCDG00000003734) ENSDCDG00000003534 naga (ENSDCDG00000003459) Denticle herring MODERN SPECIES 308 KIF3C (ENSDCDG00000030695) rab10 (ENSDCDG00000030692) GAREM2 (ENSDCDG00000030691) hadhaa (ENSDCDG00000030490) hadhb (ENSDCDG00000029680) tfap2d (ENSDCDG00000029659) #21 tfap2b (ENSDCDG00000029651) #22 Euteleosteomorpha ANCESTRAL SPECIES 92 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 Acanthomorphata ANCESTRAL SPECIES 219 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 Euacanthomorphacea ANCESTRAL SPECIES 13 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 ENSGT00940000158598 Percomorphaceae ANCESTRAL SPECIES 14 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Tiger tail seahorse MODERN SPECIES 404 lancl1 (ENSHCOG00000009845) erbb4a (ENSHCOG00000009913) RAMP1 (ENSHCOG00000009924) si:ch211-93g23.2 (ENSHCOG00000009980) klf7a (ENSHCOG00000009996) CREB1 (ENSHCOG00000010030) mettl21a (ENSHCOG00000010040) ENSHCOG00000010088 ENSHCOG00000010143 ENSHCOG00000010154 atp5mj (ENSHCOG00000010159) GAREM2 (ENSHCOG00000010186) hadhaa (ENSHCOG00000010233) hadhb (ENSHCOG00000010250) tfap2d (ENSHCOG00000010271) #21 tfap2b (ENSHCOG00000010301) #22 ENSHCOG00000010312 map3k5 (ENSHCOG00000010382) lrp11 (ENSHCOG00000010396) pcmt (ENSHCOG00000010431) nup43 (ENSHCOG00000010466) lats1 (ENSHCOG00000000325) rab10 (ENSHCOG00000010514) KIF3C (ENSHCOG00000010641) ENSHCOG00000010657 dtnba (ENSHCOG00000010711) ENSHCOG00000010737 dnmt3aa (ENSHCOG00000010776) dpysl5b (ENSHCOG00000010906) mapre3b (ENSHCOG00000010940) tmem214 (ENSHCOG00000010965) Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT01030000236465 ENSGT00940000156521.b ENSGT00940000155691.c.b ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Pomacentridae ANCESTRAL SPECIES 21 ENSGT00390000014424 ENSGT00940000155621 ENSGT00950000183053.B ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01100000263794 ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Pomacentridae_A ANCESTRAL SPECIES 25 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B.g ENSGT00940000154656.ob.b ENSGT01100000263794 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000017237 Amphiprion ANCESTRAL SPECIES 14 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B.g ENSGT00940000154656.ob.b ENSGT00940000162226.a ENSGT01100000263794 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000164472.a.b.c.a.a.a ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000017237 ENSGT00940000158248.b Clown anemonefish MODERN SPECIES 3418 mtif3 (ENSAOCG00000022968) ENSAOCG00000022958 knstrn (ENSAOCG00000022946) ENSAOCG00000022932 ENSAOCG00000001653 nudt14 (ENSAOCG00000022892) jag2b (ENSAOCG00000022865) esr2a (ENSAOCG00000022759) ENSAOCG00000022740 ENSAOCG00000022714 ENSAOCG00000022706 GAREM2 (ENSAOCG00000022689) hadhaa (ENSAOCG00000022641) hadhb (ENSAOCG00000022509) tfap2d (ENSAOCG00000022463) #21 tfap2b (ENSAOCG00000022433) #22 map3k5 (ENSAOCG00000022391) ENSAOCG00000022299 lrp11 (ENSAOCG00000022286) pcmt (ENSAOCG00000002467) nup43 (ENSAOCG00000022255) lats1 (ENSAOCG00000022237) rab10 (ENSAOCG00000022208) KIF3C (ENSAOCG00000022180) dtnba (ENSAOCG00000022134) ENSAOCG00000022006 dnmt3aa (ENSAOCG00000021991) dpysl5b (ENSAOCG00000021925) mapre3b (ENSAOCG00000021865) tmem214 (ENSAOCG00000021837) slc35f6 (ENSAOCG00000001957) Orange clownfish MODERN SPECIES 2 reps1 (ENSAPEG00000006646) abracl (ENSAPEG00000006623) heca (ENSAPEG00000006599) mtif3 (ENSAPEG00000006581) knstrn (ENSAPEG00000006566) nudt14 (ENSAPEG00000006558) jag2b (ENSAPEG00000006434) esr2a (ENSAPEG00000006416) ENSAPEG00000006397 ENSAPEG00000006379 ENSAPEG00000006373 GAREM2 (ENSAPEG00000006332) hadhaa (ENSAPEG00000006281) hadhb (ENSAPEG00000006210) tfap2d (ENSAPEG00000006165) #21 tfap2b (ENSAPEG00000006137) #22 map3k5 (ENSAPEG00000006044) ENSAPEG00000006025 lrp11 (ENSAPEG00000006012) pcmt (ENSAPEG00000005991) nup43 (ENSAPEG00000005959) lats1 (ENSAPEG00000005925) rab10 (ENSAPEG00000005895) KIF3C (ENSAPEG00000005875) dtnba (ENSAPEG00000005713) ENSAPEG00000005524 dnmt3aa (ENSAPEG00000005497) dpysl5b (ENSAPEG00000005446) mapre3b (ENSAPEG00000005411) tmem214 (ENSAPEG00000005390) slc35f6 (ENSAPEG00000005371) Spiny chromis MODERN SPECIES 443 ctsh (ENSAPOG00000000492) BLM (ENSAPOG00000017966) FRMD5 (ENSAPOG00000000489) jag2b (ENSAPOG00000017878) ENSAPOG00000017860 esr2a (ENSAPOG00000017834) ENSAPOG00000017777 ENSAPOG00000017753 GAREM2 (ENSAPOG00000017745) hadhaa (ENSAPOG00000017730) hadhb (ENSAPOG00000017550) tfap2d (ENSAPOG00000017460) #21 tfap2b (ENSAPOG00000017420) #22 Bicolor damselfish MODERN SPECIES 378 ENSSPAG00000016790 atp5mj (ENSSPAG00000016776) GAREM2 (ENSSPAG00000016759) hadhaa (ENSSPAG00000016716) hadhb (ENSSPAG00000016668) tfap2d (ENSSPAG00000016633) #21 tfap2b (ENSSPAG00000016614) #22 map3k5 (ENSSPAG00000016490) ENSSPAG00000016472 ENSSPAG00000016462 pcmt (ENSSPAG00000016434) nup43 (ENSSPAG00000016389) lats1 (ENSSPAG00000016362) rab10 (ENSSPAG00000016339) KIF3C (ENSSPAG00000016323) ENSSPAG00000016314 dtnba (ENSSPAG00000016121) dnmt3aa (ENSSPAG00000015957) dpysl5b (ENSSPAG00000015889) mapre3b (ENSSPAG00000015835) tmem214 (ENSSPAG00000015806) ccdc25 (ENSSPAG00000015787) Cichlidae ANCESTRAL SPECIES 12 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000159678 ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b Haplochromini ANCESTRAL SPECIES 13 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000159678 ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a.f.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000159678 ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Haplochromini_B ANCESTRAL SPECIES 34 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a.f.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000159678 ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Zebra mbuna MODERN SPECIES 1097 heca (ENSMZEG00005004361) mtif3 (ENSMZEG00005004382) ENSMZEG00005004391 ENSMZEG00005004400 ENSMZEG00005004409 nudt14 (ENSMZEG00005004433) jag2b (ENSMZEG00005004473) esr2a (ENSMZEG00005004568) ENSMZEG00005004581 ENSMZEG00005004620 atp5mj (ENSMZEG00005004660) GAREM2 (ENSMZEG00005004673) hadhaa (ENSMZEG00005004774) hadhb (ENSMZEG00005004793) tfap2d (ENSMZEG00005004802) #21 tfap2b (ENSMZEG00005004825) #22 ENSMZEG00005004842 map3k5 (ENSMZEG00005004868) ENSMZEG00005004945 ENSMZEG00005004955 pcmt (ENSMZEG00005004971) nup43 (ENSMZEG00005004999) lats1 (ENSMZEG00005005028) rab10 (ENSMZEG00005005043) KIF3C (ENSMZEG00005005122) ENSMZEG00005005140 dtnba (ENSMZEG00005005170) dnmt3aa (ENSMZEG00005005225) dpysl5b (ENSMZEG00005005296) mapre3b (ENSMZEG00005005343) tmem214 (ENSMZEG00005005380) Eastern happy MODERN SPECIES 6 mtif3 (ENSACLG00000026944) ENSACLG00000026948 knstrn (ENSACLG00000026954) ENSACLG00000026965 nudt14 (ENSACLG00000026993) jag2b (ENSACLG00000027008) ENSACLG00000027079 esr2a (ENSACLG00000027089) ENSACLG00000027097 ENSACLG00000027105 atp5mj (ENSACLG00000027118) GAREM2 (ENSACLG00000027126) hadhaa (ENSACLG00000027153) hadhb (ENSACLG00000027202) tfap2d (ENSACLG00000027212) #21 tfap2b (ENSACLG00000027222) #22 ENSACLG00000027229 map3k5 (ENSACLG00000027238) ENSACLG00000027285 ENSACLG00000027288 ENSACLG00000027292 pcmt (ENSACLG00000027300) nup43 (ENSACLG00000027309) lats1 (ENSACLG00000027320) ENSACLG00000027325 rab10 (ENSACLG00000027326) KIF3C (ENSACLG00000027331) ENSACLG00000027339 dtnba (ENSACLG00000027349) dnmt3aa (ENSACLG00000027364) ENSACLG00000027381 P. nyererei MODERN SPECIES 369 clu (ENSPNYG00000001680) reps1 (ENSPNYG00000001637) abracl (ENSPNYG00000001611) heca (ENSPNYG00000001579) mtif3 (ENSPNYG00000001571) ENSPNYG00000001558 ENSPNYG00000001521 nudt14 (ENSPNYG00000001467) jag2b (ENSPNYG00000001393) esr2a (ENSPNYG00000001357) ENSPNYG00000001312 GAREM2 (ENSPNYG00000001278) hadhaa (ENSPNYG00000001189) hadhb (ENSPNYG00000001173) tfap2d (ENSPNYG00000001125) #21 tfap2b (ENSPNYG00000001101) #22 ENSPNYG00000001091 map3k5 (ENSPNYG00000000969) ENSPNYG00000000948 ENSPNYG00000000921 pcmt (ENSPNYG00000000882) nup43 (ENSPNYG00000000835) lats1 (ENSPNYG00000000828) rab10 (ENSPNYG00000000820) KIF3C (ENSPNYG00000000722) ENSPNYG00000000695 dtnba (ENSPNYG00000022207) ENSPNYG00000022195 dnmt3aa (ENSPNYG00000022177) dpysl5b (ENSPNYG00000022155) mapre3b (ENSPNYG00000022130) Burton s mouthbrooder MODERN SPECIES 401 heca (ENSHBUG00000011698) mtif3 (ENSHBUG00000011667) ENSHBUG00000011654 ENSHBUG00000011639 ENSHBUG00000011616 nudt14 (ENSHBUG00000011602) jag2b (ENSHBUG00000011589) esr2a (ENSHBUG00000011554) ENSHBUG00000011495 ENSHBUG00000011408 atp5mj (ENSHBUG00000011374) GAREM2 (ENSHBUG00000011363) hadhaa (ENSHBUG00000011334) hadhb (ENSHBUG00000011032) tfap2d (ENSHBUG00000011014) #21 tfap2b (ENSHBUG00000010991) #22 ENSHBUG00000010951 map3k5 (ENSHBUG00000010928) lrp11 (ENSHBUG00000010779) pcmt (ENSHBUG00000010762) nup43 (ENSHBUG00000010733) lats1 (ENSHBUG00000010689) rab10 (ENSHBUG00000010649) KIF3C (ENSHBUG00000010630) ENSHBUG00000010621 ENSHBUG00000010618 dtnba (ENSHBUG00000010600) Lyretail cichlid MODERN SPECIES 314 clu (ENSNBRG00000002113) reps1 (ENSNBRG00000002131) abracl (ENSNBRG00000002197) heca (ENSNBRG00000002211) mtif3 (ENSNBRG00000002243) ENSNBRG00000002251 ENSNBRG00000002292 nudt14 (ENSNBRG00000002306) jag2b (ENSNBRG00000002325) esr2a (ENSNBRG00000002405) ENSNBRG00000002450 GAREM2 (ENSNBRG00000002514) hadhaa (ENSNBRG00000002547) hadhb (ENSNBRG00000002804) tfap2d (ENSNBRG00000002857) #21 tfap2b (ENSNBRG00000002887) #22 map3k5 (ENSNBRG00000002912) ENSNBRG00000003008 ENSNBRG00000003018 pcmt (ENSNBRG00000003034) nup43 (ENSNBRG00000003075) lats1 (ENSNBRG00000003131) rab10 (ENSNBRG00000003165) KIF3C (ENSNBRG00000003196) ENSNBRG00000003232 dtnba (ENSNBRG00000003263) dnmt3aa (ENSNBRG00000003312) dpysl5b (ENSNBRG00000003386) mapre3b (ENSNBRG00000003445) tmem214 (ENSNBRG00000003477) ENSNBRG00000003523 Nile tilapia MODERN SPECIES 6 clu (ENSONIG00000005663) reps1 (ENSONIG00000005660) heca (ENSONIG00000005653) mtif3 (ENSONIG00000005651) knstrn (ENSONIG00000005650) ENSONIG00000005647 nudt14 (ENSONIG00000005646) jag2b (ENSONIG00000005636) esr2a (ENSONIG00000005633) ENSONIG00000005623 atp5mj (ENSONIG00000035166) GAREM2 (ENSONIG00000005617) hadhaa (ENSONIG00000005605) hadhb (ENSONIG00000005593) tfap2d (ENSONIG00000005592) #21 tfap2b (ENSONIG00000005583) #22 map3k5 (ENSONIG00000005579) ENSONIG00000029607 lrp11 (ENSONIG00000005575) pcmt (ENSONIG00000005572) nup43 (ENSONIG00000005570) lats1 (ENSONIG00000005566) rab10 (ENSONIG00000028151) KIF3C (ENSONIG00000005560) ENSONIG00000005558 dtnba (ENSONIG00000005550) dnmt3aa (ENSONIG00000005542) dpysl5b (ENSONIG00000005535) mapre3b (ENSONIG00000005534) tmem214 (ENSONIG00000005531) ENSONIG00000028740 Midas cichlid MODERN SPECIES 96 atp5mj (ENSACIG00000023468) GAREM2 (ENSACIG00000023472) hadhaa (ENSACIG00000023477) hadhb (ENSACIG00000023487) tfap2d (ENSACIG00000023523) #21 tfap2b (ENSACIG00000023602) #22 ENSACIG00000023743 ENSACIG00000023746 map3k5 (ENSACIG00000023750) ENSACIG00000023755 ENSACIG00000023757 pcmt (ENSACIG00000023767) nup43 (ENSACIG00000023771) lats1 (ENSACIG00000023776) rab10 (ENSACIG00000023777) KIF3C (ENSACIG00000023781) ENSACIG00000023799 dtnba (ENSACIG00000023804) dnmt3aa (ENSACIG00000023812) dpysl5b (ENSACIG00000023831) Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Aplocheiloidei ANCESTRAL SPECIES 27 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Mangrove rivulus MODERN SPECIES 20 abracl (ENSKMAG00000022154) heca (ENSKMAG00000022155) mtif3 (ENSKMAG00000022157) ENSKMAG00000022159 ENSKMAG00000022160 nudt14 (ENSKMAG00000022162) jag2b (ENSKMAG00000022164) ENSKMAG00000022168 esr2a (ENSKMAG00000022169) ENSKMAG00000022182 atp5mj (ENSKMAG00000022186) GAREM2 (ENSKMAG00000022189) hadhb (ENSKMAG00000022192) ENSKMAG00000022194 tfap2d (ENSKMAG00000022196) #21 tfap2b (ENSKMAG00000022197) #22 ENSKMAG00000022199 map3k5 (ENSKMAG00000022202) lrp11 (ENSKMAG00000022206) pcmt (ENSKMAG00000022208) nup43 (ENSKMAG00000022209) lats1 (ENSKMAG00000022210) rab10 (ENSKMAG00000022212) KIF3C (ENSKMAG00000022214) ENSKMAG00000022215 dtnba (ENSKMAG00000022216) dnmt3aa (ENSKMAG00000022221) dpysl5b (ENSKMAG00000022225) mapre3b (ENSKMAG00000022229) tmem214 (ENSKMAG00000022232) Turquoise killifish MODERN SPECIES 1613 clu (ENSNFUG00015002311) reps1 (ENSNFUG00015001994) abracl (ENSNFUG00015001908) ENSNFUG00015001898 MTIF3 (ENSNFUG00015001886) ENSNFUG00015001878 ENSNFUG00015001864 NUDT14 (ENSNFUG00015001854) jag2b (ENSNFUG00015001390) esr2a (ENSNFUG00015001117) ENSNFUG00015001035 atp5mj (ENSNFUG00015001030) GAREM2 (ENSNFUG00015001027) hadhb (ENSNFUG00015000932) TFAP2D (ENSNFUG00015000914) #21 TFAP2B (ENSNFUG00015000900) #22 ENSNFUG00015000894 ENSNFUG00015000891 map3k5 (ENSNFUG00015000396) ENSNFUG00015000064 ENSNFUG00015000060 pcmt (ENSNFUG00015005708) NUP43 (ENSNFUG00015005692) lats1 (ENSNFUG00015005664) RAB10 (ENSNFUG00015005646) ENSNFUG00015005601 KIF3C (ENSNFUG00015005555) ENSNFUG00015005529 DTNB (ENSNFUG00015004216) dnmt3aa (ENSNFUG00015003738) dpysl5b (ENSNFUG00015003617) Cyprinodontoidei ANCESTRAL SPECIES 12 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00410000025918 ENSGT00390000010376 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01100000263794 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 NAME_4 ANCESTRAL SPECIES 84 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00410000025918 ENSGT00390000010376 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01100000263794 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Mummichog MODERN SPECIES 2354 reps1 (ENSFHEG00000015654) abracl (ENSFHEG00000015664) heca (ENSFHEG00000015670) mtif3 (ENSFHEG00000015675) ENSFHEG00000015684 knstrn (ENSFHEG00000015691) nudt14 (ENSFHEG00000015702) jag2b (ENSFHEG00000015794) esr2a (ENSFHEG00000015962) ENSFHEG00000016059 ENSFHEG00000016077 ENSFHEG00000016105 GAREM2 (ENSFHEG00000016152) hadhb (ENSFHEG00000016241) tfap2d (ENSFHEG00000016270) #21 tfap2b (ENSFHEG00000016294) #22 ENSFHEG00000016302 map3k5 (ENSFHEG00000016450) lrp11 (ENSFHEG00000016464) pcmt (ENSFHEG00000016480) nup43 (ENSFHEG00000016531) lats1 (ENSFHEG00000016564) rab10 (ENSFHEG00000016577) KIF3C (ENSFHEG00000016624) ENSFHEG00000016630 ENSFHEG00000016637 Sheepshead minnow MODERN SPECIES 176 ENSCVAG00000021085 hadhb (ENSCVAG00000021297) tfap2d (ENSCVAG00000021356) #21 tfap2b (ENSCVAG00000021386) #22 map3k5 (ENSCVAG00000021465) lrp11 (ENSCVAG00000021482) pcmt (ENSCVAG00000021517) nup43 (ENSCVAG00000021546) lats1 (ENSCVAG00000021576) rab10 (ENSCVAG00000021597) KIF3C (ENSCVAG00000021603) ENSCVAG00000021605 dtnba (ENSCVAG00000021632) dnmt3aa (ENSCVAG00000021660) dpysl5b (ENSCVAG00000021693) mapre3b (ENSCVAG00000000554) tmem214 (ENSCVAG00000021738) ENSCVAG00000021747 ccdc25 (ENSCVAG00000021759) Poeciliinae ANCESTRAL SPECIES 15 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00410000025918 ENSGT00390000010376 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Poecilia ANCESTRAL SPECIES 9 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00410000025918 ENSGT00390000010376 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b.z.b ENSGT00940000178561 ENSGT00940000154656.ob.b.y ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 NAME_6 ANCESTRAL SPECIES 2 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00410000025918 ENSGT00390000010376 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b.z.b ENSGT00940000154656.ob.b.y ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Amazon molly MODERN SPECIES 253 abracl (ENSPFOG00000016428) heca (ENSPFOG00000016417) mtif3 (ENSPFOG00000016409) ENSPFOG00000016388 ENSPFOG00000016360 knstrn (ENSPFOG00000016353) nudt14 (ENSPFOG00000016378) jag2b (ENSPFOG00000016087) esr2a (ENSPFOG00000016031) ENSPFOG00000015966 ENSPFOG00000015957 GAREM2 (ENSPFOG00000015932) hadhb (ENSPFOG00000015886) ENSPFOG00000015882 tfap2d (ENSPFOG00000015857) #21 tfap2b (ENSPFOG00000015812) #22 map3k5 (ENSPFOG00000015511) lrp11 (ENSPFOG00000015406) pcmt (ENSPFOG00000015367) nup43 (ENSPFOG00000023118) lats1 (ENSPFOG00000015291) rab10 (ENSPFOG00000015245) KIF3C (ENSPFOG00000015190) ENSPFOG00000020606 dtnba (ENSPFOG00000014988) dnmt3aa (ENSPFOG00000014869) dpysl5b (ENSPFOG00000014704) mapre3b (ENSPFOG00000024031) tmem214 (ENSPFOG00000014631) ccdc25 (ENSPFOG00000014567) esco2 (ENSPFOG00000014531) Sailfin molly MODERN SPECIES 564 tfap2d (ENSPLAG00000003872) #21 tfap2b (ENSPLAG00000003880) #22 ENSPLAG00000003886 map3k5 (ENSPLAG00000003973) lrp11 (ENSPLAG00000004007) pcmt (ENSPLAG00000004032) nup43 (ENSPLAG00000004056) lats1 (ENSPLAG00000004063) rab10 (ENSPLAG00000004067) Guppy MODERN SPECIES 452 ENSPREG00000015432 heca (ENSPREG00000015445) mtif3 (ENSPREG00000015455) ENSPREG00000015463 ENSPREG00000015494 knstrn (ENSPREG00000015561) nudt14 (ENSPREG00000015593) jag2b (ENSPREG00000015614) esr2a (ENSPREG00000015654) ENSPREG00000015679 ENSPREG00000015712 ENSPREG00000015725 GAREM2 (ENSPREG00000015750) hadhb (ENSPREG00000015797) tfap2d (ENSPREG00000015826) #21 tfap2b (ENSPREG00000015846) #22 ENSPREG00000015861 map3k5 (ENSPREG00000015885) ENSPREG00000015933 ENSPREG00000015950 pcmt (ENSPREG00000015965) nup43 (ENSPREG00000015983) lats1 (ENSPREG00000016002) rab10 (ENSPREG00000016055) KIF3C (ENSPREG00000016235) ENSPREG00000016325 dtnba (ENSPREG00000016330) dnmt3aa (ENSPREG00000016371) dpysl5b (ENSPREG00000016401) mapre3b (ENSPREG00000016432) tmem214 (ENSPREG00000016453) Platyfish MODERN SPECIES 6 nudt14 (ENSXMAG00000006125) jag2b (ENSXMAG00000025537) esr2a (ENSXMAG00000006136) ENSXMAG00000006145 ENSXMAG00000006155 ENSXMAG00000028960 hadhb (ENSXMAG00000006169) tfap2d (ENSXMAG00000021464) #21 tfap2b (ENSXMAG00000029265) #22 map3k5 (ENSXMAG00000016278) lrp11 (ENSXMAG00000021431) pcmt (ENSXMAG00000006249) nup43 (ENSXMAG00000006262) lats1 (ENSXMAG00000006278) rab10 (ENSXMAG00000023858) KIF3C (ENSXMAG00000006298) ENSXMAG00000006310 dtnba (ENSXMAG00000006317) dnmt3aa (ENSXMAG00000015620) dpysl5b (ENSXMAG00000013095) mapre3b (ENSXMAG00000013109) tmem214 (ENSXMAG00000013122) ccdc25 (ENSXMAG00000010835) esco2 (ENSXMAG00000010833) Oryzias ANCESTRAL SPECIES 50 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00940000158188 Oryzias_b ANCESTRAL SPECIES 74 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 Javanese ricefish MODERN SPECIES 16 ak7a (ENSOJAG00000014566) ENSOJAG00000014539 clu (ENSOJAG00000014520) abracl (ENSOJAG00000014410) heca (ENSOJAG00000014347) mtif3 (ENSOJAG00000014341) ENSOJAG00000014327 ENSOJAG00000014304 nudt14 (ENSOJAG00000014294) jag2b (ENSOJAG00000013384) esr2a (ENSOJAG00000012878) atp5mj (ENSOJAG00000012832) GAREM2 (ENSOJAG00000012736) hadhb (ENSOJAG00000012650) tfap2d (ENSOJAG00000012592) #21 tfap2b (ENSOJAG00000012496) #22 map3k5 (ENSOJAG00000011429) MAN1A1 (ENSOJAG00000011012) tmem214 (ENSOJAG00000010825) ENSOJAG00000010800 dpysl5b (ENSOJAG00000010611) ENSOJAG00000009087 dtnba (ENSOJAG00000006738) ENSOJAG00000006367 KIF3C (ENSOJAG00000006190) rab10 (ENSOJAG00000006154) lats1 (ENSOJAG00000006124) nup43 (ENSOJAG00000006037) pcmt (ENSOJAG00000005946) lrp11 (ENSOJAG00000005919) ENSOJAG00000005878 Indian medaka MODERN SPECIES 22 smim8 (ENSOMEG00000001906) znf292b (ENSOMEG00000001900) ENSOMEG00000001891 zgc:112001 (ENSOMEG00000001887) LRFN2 (ENSOMEG00000001883) ENSOMEG00000000679 ENSOMEG00000001870 nudt14 (ENSOMEG00000023642) jag2b (ENSOMEG00000023627) esr2a (ENSOMEG00000023615) ENSOMEG00000023577 atp5mj (ENSOMEG00000023533) GAREM2 (ENSOMEG00000023521) hadhb (ENSOMEG00000023484) tfap2d (ENSOMEG00000023441) #21 tfap2b (ENSOMEG00000023419) #22 ENSOMEG00000023399 ENSOMEG00000023377 map3k5 (ENSOMEG00000023352) ENSOMEG00000023267 ENSOMEG00000023259 hsdl1 (ENSOMEG00000023251) gja11 (ENSOMEG00000023241) ENSOMEG00000023235 gja12.1 (ENSOMEG00000023224) si:ch73-111k22.2 (ENSOMEG00000023212) ENSOMEG00000023194 ENSOMEG00000000626 ttc13 (ENSOMEG00000023180) arv1 (ENSOMEG00000023157) FAM89A (ENSOMEG00000023151) Oryzias_a ANCESTRAL SPECIES 72 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621.uc.b ENSGT00980000202865 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b.`b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.b Japanese Medaka HdrR MODERN SPECIES 16 mtif3 (ENSORLG00000017742) knstrn (ENSORLG00000017740) ENSORLG00000023507 nudt14 (ENSORLG00000017732) ENSORLG00000029336 ENSORLG00000026890 ENSORLG00000027404 esr2a (ENSORLG00000017721) ENSORLG00000017714 ENSORLG00000023348 atp5mj (ENSORLG00000021792) GAREM2 (ENSORLG00000017705) hadhb (ENSORLG00000018829) ENSORLG00000023310 tfap2d (ENSORLG00000017699) #21 tfap2b (ENSORLG00000017695) #22 ENSORLG00000025213 map3k5 (ENSORLG00000017694) lrp11 (ENSORLG00000017688) ENSORLG00000029363 ENSORLG00000027956 prrc1 (ENSORLG00000022750) YTHDC2 (ENSORLG00000019098) ENSORLG00000023245 ENSORLG00000024078 dcp2 (ENSORLG00000019046) ENSORLG00000017683 tmem214 (ENSORLG00000017680) mapre3b (ENSORLG00000017672) dpysl5b (ENSORLG00000017657) ENSORLG00000028694 Chinese medaka MODERN SPECIES 118 tfap2d (ENSOSIG00000017349) #21 tfap2b (ENSOSIG00000017352) #22 map3k5 (ENSOSIG00000017386) ENSOSIG00000017606 Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Eupercaria ANCESTRAL SPECIES 16 ENSGT00940000157012.l ENSGT00940000161252.h ENSGT00940000160560.b.f.a.a.b ENSGT00940000160560.b.f.a.a.a ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Tetraodontidae ANCESTRAL SPECIES 63 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b.d ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01100000264937 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT01060000248856 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 valopa (ENSTNIG00000017085) ENSTNIG00000000187 ENSTNIG00000017084 ENSTNIG00000017083 ADGRA1 (ENSTNIG00000017082) KNDC1 (ENSTNIG00000017081) vox (ENSTNIG00000001621) ENSTNIG00000017080 ENSTNIG00000017079 dntt (ENSTNIG00000017078) blnk (ENSTNIG00000001501) tiprl (ENSTNIG00000014243) PPP1R14A (ENSTNIG00000014242) ENSTNIG00000014241 tfap2b (ENSTNIG00000014240) #22 tfap2b (ENSTNIG00000014239) #22 ENSTNIG00000014237 ENSTNIG00000014236 ENSTNIG00000014204 bves (ENSTNIG00000014202) HACE1 (ENSTNIG00000014201) aip (ENSTNIG00000014182) cdk2ap2 (ENSTNIG00000014181) GPR83 (ENSTNIG00000014180) ankrd49 (ENSTNIG00000014179) cacna1fb (ENSTNIG00000014174) ENSTNIG00000014173 ENSTNIG00000014172 ENSTNIG00000014171 ENSTNIG00000001067 hccsb (ENSTNIG00000014170) Tetraodon MODERN SPECIES 26 nkx6.2 (ENSTNIG00000017086) valopa (ENSTNIG00000017085) ENSTNIG00000000187 ENSTNIG00000017084 ENSTNIG00000017083 ADGRA1 (ENSTNIG00000017082) KNDC1 (ENSTNIG00000017081) vox (ENSTNIG00000001621) ENSTNIG00000017080 ENSTNIG00000017079 dntt (ENSTNIG00000017078) blnk (ENSTNIG00000001501) tiprl (ENSTNIG00000014243) PPP1R14A (ENSTNIG00000014242) ENSTNIG00000014241 tfap2b (ENSTNIG00000014240) #22 tfap2b (ENSTNIG00000014239) #22 ENSTNIG00000014237 ENSTNIG00000014236 ENSTNIG00000014204 bves (ENSTNIG00000014202) HACE1 (ENSTNIG00000014201) aip (ENSTNIG00000014182) cdk2ap2 (ENSTNIG00000014181) GPR83 (ENSTNIG00000014180) ankrd49 (ENSTNIG00000014179) cacna1fb (ENSTNIG00000014174) ENSTNIG00000014173 ENSTNIG00000014172 ENSTNIG00000014171 ENSTNIG00000001067 Fugu MODERN SPECIES 7 reps1 (ENSTRUG00000013302) abracl (ENSTRUG00000032815) heca (ENSTRUG00000021361) mtif3 (ENSTRUG00000026716) knstrn (ENSTRUG00000025048) ENSTRUG00000013401 nudt14 (ENSTRUG00000028318) jag2b (ENSTRUG00000013426) esr2a (ENSTRUG00000013709) ENSTRUG00000020849 ENSTRUG00000023535 ENSTRUG00000024216 GAREM2 (ENSTRUG00000033254) hadhb (ENSTRUG00000013847) tfap2d (ENSTRUG00000000856) #21 tfap2b (ENSTRUG00000001332) #22 ENSTRUG00000031830 map3k5 (ENSTRUG00000001070) ENSTRUG00000001331 ENSTRUG00000021200 pcmt (ENSTRUG00000024022) nup43 (ENSTRUG00000001466) lats1 (ENSTRUG00000001479) rab10 (ENSTRUG00000001680) ENSTRUG00000030265 ENSTRUG00000026009 KIF3C (ENSTRUG00000001953) ENSTRUG00000023527 ENSTRUG00000002345 dtnba (ENSTRUG00000002471) dnmt3aa (ENSTRUG00000003838) Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00950000183053.B ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00950000183053.B ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Perciformes ANCESTRAL SPECIES 14 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Cottioidei ANCESTRAL SPECIES 25 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00940000155621 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000159678 ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Lumpfish MODERN SPECIES 16 knstrn (ENSCLMG00005022658) ENSCLMG00005022657 mtif3 (ENSCLMG00005022656) heca (ENSCLMG00005022655) ABRACL (ENSCLMG00005022653) ENSCLMG00005022651 nudt14 (ENSCLMG00005022648) jag2b (ENSCLMG00005022643) esr2a (ENSCLMG00005022641) ENSCLMG00005022633 ENSCLMG00005022624 atp5mj (ENSCLMG00005022622) GAREM2 (ENSCLMG00005022620) hadhb (ENSCLMG00005022567) tfap2d (ENSCLMG00005022563) #21 tfap2b (ENSCLMG00005022560) #22 ENSCLMG00005022558 map3k5 (ENSCLMG00005022543) lrp11 (ENSCLMG00005022540) pcmt (ENSCLMG00005022539) nup43 (ENSCLMG00005022538) lats1 (ENSCLMG00005022537) rab10 (ENSCLMG00005022536) KIF3C (ENSCLMG00005022533) ENSCLMG00005022531 dtnba (ENSCLMG00005022513) dnmt3aa (ENSCLMG00005022191) dpysl5b (ENSCLMG00005022181) mapre3b (ENSCLMG00005022180) tmem214 (ENSCLMG00005022179) ccdc25 (ENSCLMG00005022176) Stickleback MODERN SPECIES 18 heca (ENSGACG00000007571) mtif3 (ENSGACG00000007565) ENSGACG00000007561 ENSGACG00000007552 nudt14 (ENSGACG00000007543) jag2b (ENSGACG00000007522) esr2a (ENSGACG00000007514) ENSGACG00000007483 ENSGACG00000007478 ENSGACG00000007470 ENSGACG00000007466 ENSGACG00000007463 GAREM2 (ENSGACG00000007459) hadhb (ENSGACG00000007328) tfap2d (ENSGACG00000007319) #21 tfap2b (ENSGACG00000007277) #22 map3k5 (ENSGACG00000007264) lrp11 (ENSGACG00000007258) pcmt (ENSGACG00000007215) nup43 (ENSGACG00000007209) lats1 (ENSGACG00000007187) rab10 (ENSGACG00000007169) KIF3C (ENSGACG00000007156) ENSGACG00000007154 ENSGACG00000007147 dtnba (ENSGACG00000007107) dnmt3aa (ENSGACG00000007097) dpysl5b (ENSGACG00000007021) mapre3b (ENSGACG00000007011) tmem214 (ENSGACG00000006995) ccdc25 (ENSGACG00000006958) Perciformes_a ANCESTRAL SPECIES 15 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00940000154677.b.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Channel bull blenny MODERN SPECIES 16 clu (ENSCGOG00000011917) reps1 (ENSCGOG00000011233) abracl (ENSCGOG00000011222) heca (ENSCGOG00000011219) mtif3 (ENSCGOG00000011217) knstrn (ENSCGOG00000011212) nudt14 (ENSCGOG00000011205) jag2b (ENSCGOG00000009934) esr2a (ENSCGOG00000009032) ENSCGOG00000008997 ENSCGOG00000008987 ENSCGOG00000008984 GAREM2 (ENSCGOG00000008980) hadhb (ENSCGOG00000008141) tfap2d (ENSCGOG00000008090) #21 tfap2b (ENSCGOG00000008070) #22 map3k5 (ENSCGOG00000007171) lrp11 (ENSCGOG00000007153) pcmt (ENSCGOG00000007149) dnmt3aa (ENSCGOG00000005841) dpysl5b (ENSCGOG00000005773) mapre3b (ENSCGOG00000005731) tmem214 (ENSCGOG00000005705) esco2 (ENSCGOG00000005698) ENSCGOG00000005694 dpysl5b (ENSCGOG00000005619) mapre3b (ENSCGOG00000005599) tmem214 (ENSCGOG00000005589) ccdc25 (ENSCGOG00000005575) esco2 (ENSCGOG00000005569) pbk (ENSCGOG00000005565) Pike perch MODERN SPECIES 4 reps1 (ENSSLUG00000001034) abracl (ENSSLUG00000001008) heca (ENSSLUG00000001004) mtif3 (ENSSLUG00000001000) knstrn (ENSSLUG00000000996) ENSSLUG00000000991 nudt14 (ENSSLUG00000000989) jag2b (ENSSLUG00000000947) esr2a (ENSSLUG00000000891) ENSSLUG00000000868 atp5mj (ENSSLUG00000000864) GAREM2 (ENSSLUG00000000858) hadhaa (ENSSLUG00000000834) hadhb (ENSSLUG00000000705) tfap2d (ENSSLUG00000000640) #21 tfap2b (ENSSLUG00000000633) #22 ENSSLUG00000000628 map3k5 (ENSSLUG00000000392) lrp11 (ENSSLUG00000000297) pcmt (ENSSLUG00000000285) nup43 (ENSSLUG00000000258) lats1 (ENSSLUG00000000228) rab10 (ENSSLUG00000000210) KIF3C (ENSSLUG00000000179) ENSSLUG00000000169 dtnba (ENSSLUG00000000111) dnmt3aa (ENSSLUG00000012065) dpysl5b (ENSSLUG00000011961) mapre3b (ENSSLUG00000011889) mapre3b (ENSSLUG00000011871) tmem214 (ENSSLUG00000011508) Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 European seabass MODERN SPECIES 7 ENSDLAG00005005500 reps1 (ENSDLAG00005005490) ENSDLAG00005005363 ENSDLAG00005026844 ENSDLAG00005005460 ENSDLAG00005005449 ENSDLAG00005005396 nudt14 (ENSDLAG00005005352) jag2b (ENSDLAG00005002137) esr2a (ENSDLAG00005001770) ENSDLAG00005001702 ENSDLAG00005030584 ENSDLAG00005001693 hadhb (ENSDLAG00005001480) tfap2d (ENSDLAG00005034048) #21 tfap2b (ENSDLAG00005001349) #22 ENSDLAG00005001123 ENSDLAG00005001096 ENSDLAG00005001093 PCMT1 (ENSDLAG00005001077) nup43 (ENSDLAG00005001065) LATS1 (ENSDLAG00005001055) rab10 (ENSDLAG00005027287) KIF3C (ENSDLAG00005001041) ENSDLAG00005001039 dtnba (ENSDLAG00005000781) dnmt3aa (ENSDLAG00005000339) dpysl5b (ENSDLAG00005000252) ENSDLAG00005000225 tmem214 (ENSDLAG00005000178) ENSDLAG00005019404 Large yellow croaker MODERN SPECIES 482 reps1 (ENSLCRG00005020079) abracl (ENSLCRG00005020097) heca (ENSLCRG00005020099) mtif3 (ENSLCRG00005020104) ENSLCRG00005020113 knstrn (ENSLCRG00005020118) ENSLCRG00005020123 nudt14 (ENSLCRG00005020133) jag2b (ENSLCRG00005020318) esr2a (ENSLCRG00005021315) ENSLCRG00005021325 ENSLCRG00005021326 GAREM2 (ENSLCRG00005021332) hadhb (ENSLCRG00005021353) tfap2d (ENSLCRG00005021555) #21 tfap2b (ENSLCRG00005021570) #22 map3k5 (ENSLCRG00005021692) lrp11 (ENSLCRG00005021927) pcmt (ENSLCRG00005021933) nup43 (ENSLCRG00005021949) lats1 (ENSLCRG00005021960) rab10 (ENSLCRG00005021968) KIF3C (ENSLCRG00005021975) ENSLCRG00005021978 dtnba (ENSLCRG00005022039) dnmt3aa (ENSLCRG00005022244) dpysl5b (ENSLCRG00005022480) ENSLCRG00005022509 tmem214 (ENSLCRG00005022518) ccdc25 (ENSLCRG00005022536) esco2 (ENSLCRG00005022538) Gilthead seabream MODERN SPECIES 14 clu (ENSSAUG00010015503) reps1 (ENSSAUG00010013082) abracl (ENSSAUG00010013058) heca (ENSSAUG00010013052) mtif3 (ENSSAUG00010013051) knstrn (ENSSAUG00010013050) ENSSAUG00010013041 nudt14 (ENSSAUG00010013037) jag2b (ENSSAUG00010012094) esr2a (ENSSAUG00010012071) ENSSAUG00010012070 atp5mj (ENSSAUG00010012064) GAREM2 (ENSSAUG00010012062) hadhb (ENSSAUG00010010935) tfap2d (ENSSAUG00010010926) #21 tfap2b (ENSSAUG00010010916) #22 map3k5 (ENSSAUG00010010318) lrp11 (ENSSAUG00010010307) pcmt (ENSSAUG00010010301) lats1 (ENSSAUG00010010298) rab10 (ENSSAUG00010010294) KIF3C (ENSSAUG00010010278) ENSSAUG00010010271 dtnba (ENSSAUG00010008826) dnmt3aa (ENSSAUG00010003393) dpysl5b (ENSSAUG00010003360) ENSSAUG00010003358 mapre3b (ENSSAUG00010003357) tmem214 (ENSSAUG00010002876) ENSSAUG00010012253 ENSSAUG00010012250 Ballan wrasse MODERN SPECIES 138 heca (ENSLBEG00000016236) mtif3 (ENSLBEG00000016247) ENSLBEG00000016255 ENSLBEG00000016286 nudt14 (ENSLBEG00000016329) jag2b (ENSLBEG00000016381) esr2a (ENSLBEG00000016458) ENSLBEG00000016481 ENSLBEG00000016505 atp5mj (ENSLBEG00000016525) ENSLBEG00000016538 GAREM2 (ENSLBEG00000016558) hadhaa (ENSLBEG00000016662) hadhb (ENSLBEG00000016901) tfap2d (ENSLBEG00000016981) #21 tfap2b (ENSLBEG00000017035) #22 map3k5 (ENSLBEG00000017084) lrp11 (ENSLBEG00000017146) pcmt (ENSLBEG00000017170) nup43 (ENSLBEG00000017200) lats1 (ENSLBEG00000017235) rab10 (ENSLBEG00000017280) KIF3C (ENSLBEG00000017299) ENSLBEG00000017322 dtnba (ENSLBEG00000017416) dnmt3aa (ENSLBEG00000017607) dpysl5b (ENSLBEG00000017678) ENSLBEG00000017739 tmem214 (ENSLBEG00000017793) ccdc25 (ENSLBEG00000017845) esco2 (ENSLBEG00000017871) Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b Anabantaria ANCESTRAL SPECIES 20 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Zig-zag eel MODERN SPECIES 16 ENSMAMG00000001730 HECA (ENSMAMG00000001696) ENSMAMG00000001683 ENSMAMG00000001676 ENSMAMG00000001645 nudt14 (ENSMAMG00000001622) jag2b (ENSMAMG00000001486) esr2a (ENSMAMG00000025854) ENSMAMG00000001382 ENSMAMG00000001336 ENSMAMG00000024983 ENSMAMG00000001303 hadhb (ENSMAMG00000001232) tfap2d (ENSMAMG00000001191) #21 ENSMAMG00000025165 tfap2b (ENSMAMG00000001154) #22 ENSMAMG00000001009 lrp11 (ENSMAMG00000000977) PCMT1 (ENSMAMG00000000917) nup43 (ENSMAMG00000000858) LATS1 (ENSMAMG00000000819) rab10 (ENSMAMG00000000782) KIF3C (ENSMAMG00000000705) ENSMAMG00000024445 dtnba (ENSMAMG00000000593) dnmt3aa (ENSMAMG00000000518) dpysl5b (ENSMAMG00000000436) ENSMAMG00000000408 tmem214 (ENSMAMG00000000376) ccdc25 (ENSMAMG00000000355) ESCO2 (ENSMAMG00000000348) Anabantoidei ANCESTRAL SPECIES 15 ENSGT00530000063668.B ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Siamese fighting fish MODERN SPECIES 13 mtif3 (ENSBSLG00000018308) ENSBSLG00000018268 ENSBSLG00000018239 ENSBSLG00000018183 nudt14 (ENSBSLG00000018161) jag2b (ENSBSLG00000017823) esr2a (ENSBSLG00000017075) ENSBSLG00000016996 ENSBSLG00000016965 ENSBSLG00000016941 hadhb (ENSBSLG00000016858) ENSBSLG00000016821 GAREM2 (ENSBSLG00000022699) hadhb (ENSBSLG00000021981) tfap2d (ENSBSLG00000021890) #21 tfap2b (ENSBSLG00000021793) #22 ENSBSLG00000021775 map3k5 (ENSBSLG00000021275) lrp11 (ENSBSLG00000020946) pcmt (ENSBSLG00000020040) nup43 (ENSBSLG00000019995) lats1 (ENSBSLG00000019976) rab10 (ENSBSLG00000019960) KIF3C (ENSBSLG00000019951) ENSBSLG00000019946 dtnba (ENSBSLG00000019807) dnmt3aa (ENSBSLG00000019122) dpysl5b (ENSBSLG00000019013) mapre3b (ENSBSLG00000018993) tmem214 (ENSBSLG00000018049) ccdc25 (ENSBSLG00000018011) Climbing perch MODERN SPECIES 15 ENSATEG00000021296 HECA (ENSATEG00000021282) ENSATEG00000030031 ENSATEG00000021224 ENSATEG00000025636 ENSATEG00000021191 nudt14 (ENSATEG00000021170) jag2b (ENSATEG00000021122) esr2a (ENSATEG00000021093) ENSATEG00000021057 ENSATEG00000021045 ENSATEG00000021040 ENSATEG00000021012 hadhb (ENSATEG00000020947) tfap2d (ENSATEG00000020916) #21 tfap2b (ENSATEG00000020889) #22 ENSATEG00000030070 ENSATEG00000020817 lrp11 (ENSATEG00000020789) PCMT1 (ENSATEG00000020772) nup43 (ENSATEG00000020726) LATS1 (ENSATEG00000020702) rab10 (ENSATEG00000020686) KIF3C (ENSATEG00000020596) ENSATEG00000020537 dtnba (ENSATEG00000020468) dnmt3aa (ENSATEG00000020419) dpysl5b (ENSATEG00000020376) ENSATEG00000020361 tmem214 (ENSATEG00000020343) ccdc25 (ENSATEG00000026569) Carangaria ANCESTRAL SPECIES 18 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00510000047967 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00940000165711.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b Carangaria_A ANCESTRAL SPECIES 13 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00510000047967 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00940000165711.a.b ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT00390000004380 Seriola ANCESTRAL SPECIES 4 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01100000263794 ENSGT00530000063834.e.b ENSGT00510000047967 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000159155 ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 ENSGT01030000234597.a.b.a.b ENSGT00940000156618.c.a #25 Greater amberjack MODERN SPECIES 10 heca (ENSSDUG00000006792) mtif3 (ENSSDUG00000006816) ENSSDUG00000006822 knstrn (ENSSDUG00000006830) nudt14 (ENSSDUG00000006844) jag2b (ENSSDUG00000006894) esr2a (ENSSDUG00000007093) ENSSDUG00000007119 ENSSDUG00000007133 ENSSDUG00000007145 ENSSDUG00000007159 GAREM2 (ENSSDUG00000007171) fhit (ENSSDUG00000007190) hadhb (ENSSDUG00000007201) tfap2d (ENSSDUG00000007245) #21 tfap2b (ENSSDUG00000007261) #22 map3k5 (ENSSDUG00000007290) lrp11 (ENSSDUG00000007384) pcmt (ENSSDUG00000007397) nup43 (ENSSDUG00000007426) lats1 (ENSSDUG00000007453) rab10 (ENSSDUG00000007478) KIF3C (ENSSDUG00000007492) ENSSDUG00000007522 dtnba (ENSSDUG00000007553) dnmt3aa (ENSSDUG00000007664) dpysl5b (ENSSDUG00000007700) mapre3b (ENSSDUG00000007781) tmem214 (ENSSDUG00000007836) stmn4 (ENSSDUG00000007867) il17a/f3 (ENSSDUG00000007890) #25 Yellowtail amberjack MODERN SPECIES 2936 reps1 (ENSSLDG00000022652) abracl (ENSSLDG00000022637) heca (ENSSLDG00000022606) mtif3 (ENSSLDG00000022634) knstrn (ENSSLDG00000022593) ENSSLDG00000022556 ENSSLDG00000022530 jag2b (ENSSLDG00000022478) esr2a (ENSSLDG00000020964) ENSSLDG00000020693 ENSSLDG00000020673 GAREM2 (ENSSLDG00000020659) fhit (ENSSLDG00000020653) hadhb (ENSSLDG00000020610) tfap2d (ENSSLDG00000020577) #21 tfap2b (ENSSLDG00000020559) #22 map3k5 (ENSSLDG00000020493) lrp11 (ENSSLDG00000020480) ENSSLDG00000020473 pcmt (ENSSLDG00000020446) nup43 (ENSSLDG00000020406) lats1 (ENSSLDG00000020377) rab10 (ENSSLDG00000020361) KIF3C (ENSSLDG00000020350) ENSSLDG00000020328 ENSSLDG00000020301 dnmt3aa (ENSSLDG00000020176) dpysl5b (ENSSLDG00000020131) mapre3b (ENSSLDG00000020081) tmem214 (ENSSLDG00000020045) stmn4 (ENSSLDG00000020032) Barramundi perch MODERN SPECIES 317 ENSLCAG00010012775 ENSLCAG00010012739 atp5mj (ENSLCAG00010012736) GAREM2 (ENSLCAG00010012732) fhit (ENSLCAG00010012729) hadhb (ENSLCAG00010012538) tfap2d (ENSLCAG00010012461) #21 ENSLCAG00010012453 tfap2b (ENSLCAG00010012440) #22 map3k5 (ENSLCAG00010012094) lrp11 (ENSLCAG00010011988) ENSLCAG00010011987 pcmt (ENSLCAG00010011980) nup43 (ENSLCAG00010011975) lats1 (ENSLCAG00010011966) rab10 (ENSLCAG00010011953) KIF3C (ENSLCAG00010011929) ENSLCAG00010011916 dtnba (ENSLCAG00010011903) dnmt3aa (ENSLCAG00010011402) dpysl5b (ENSLCAG00010011282) mapre3b (ENSLCAG00010011273) tmem214 (ENSLCAG00010011167) ccdc25 (ENSLCAG00010011148) Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00940000158749 ENSGT00470000042287 ENSGT00500000044928 ENSGT00390000014424 ENSGT00390000010376 ENSGT00410000025918 ENSGT00940000154045.b ENSGT00940000164854.b ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT01060000248685 ENSGT00530000063834.e.b ENSGT00510000047967 ENSGT01030000234626.A.b ENSGT00950000182848.d #21 ENSGT00950000182848.c.b.b.b #22 ENSGT00940000177318 ENSGT00940000159155 ENSGT00940000165711.b ENSGT00940000165711.a.a ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 ENSGT00940000156975 ENSGT00940000153739.a.b.s ENSGT00940000162464.r ENSGT00940000153897.b.b ENSGT00940000155459.x.a ENSGT01030000234527.A.a.a.b.b ENSGT00490000043329.a.b.g.b ENSGT00390000002693 Tongue sole MODERN SPECIES 17 GREM1 (ENSCSEG00000003590) ENSCSEG00000003587 FMN1 (ENSCSEG00000003577) ENSCSEG00000003572 ENSCSEG00000003565 nudt14 (ENSCSEG00000003551) jag2b (ENSCSEG00000003522) esr2a (ENSCSEG00000003503) ENSCSEG00000003494 ENSCSEG00000003491 ENSCSEG00000003484 GAREM2 (ENSCSEG00000003471) fhit (ENSCSEG00000003468) hadhb (ENSCSEG00000003460) tfap2d (ENSCSEG00000003456) #21 tfap2b (ENSCSEG00000003448) #22 map3k5 (ENSCSEG00000003420) ENSCSEG00000003402 lrp11 (ENSCSEG00000003398) pcmt (ENSCSEG00000003382) nup43 (ENSCSEG00000003372) lats1 (ENSCSEG00000003366) rab10 (ENSCSEG00000003363) KIF3C (ENSCSEG00000003356) ENSCSEG00000003350 dtnba (ENSCSEG00000003317) dnmt3aa (ENSCSEG00000003308) dpysl5b (ENSCSEG00000003300) mapre3b (ENSCSEG00000003286) hist1h2a3 (ENSCSEG00000003283) tmem214 (ENSCSEG00000003274) Turbot MODERN SPECIES 12 hsp90ab1 (ENSSMAG00000002596) slc35b2 (ENSSMAG00000002710) ENSSMAG00000021901 ENSSMAG00000002743 ENSSMAG00000002764 ENSSMAG00000025667 ENSSMAG00000002852 nudt14 (ENSSMAG00000033696) ENSSMAG00000002917 ENSSMAG00000034001 ENSSMAG00000003111 ENSSMAG00000003120 ENSSMAG00000003151 hadhb (ENSSMAG00000003155) tfap2d (ENSSMAG00000003201) #21 tfap2b (ENSSMAG00000003234) #22 ENSSMAG00000003239 ENSSMAG00000003253 ENSSMAG00000026387 PCMT1 (ENSSMAG00000003401) nup43 (ENSSMAG00000003424) LATS1 (ENSSMAG00000034320) rab10 (ENSSMAG00000034648) KIF3C (ENSSMAG00000003483) ENSSMAG00000003516 dtnba (ENSSMAG00000003535) dnmt3aa (ENSSMAG00000003540) dpysl5b (ENSSMAG00000003581) ENSSMAG00000003610 tmem214 (ENSSMAG00000003636) ccdc25 (ENSSMAG00000003651) Pinecone sodierfish MODERN SPECIES 16 knstrn (ENSMMDG00005014837) ENSMMDG00005014831 nudt14 (ENSMMDG00005021240) jag2b (ENSMMDG00005020211) ENSMMDG00005020173 esr2a (ENSMMDG00005020155) ENSMMDG00005020151 ENSMMDG00005020149 ENSMMDG00005020148 atp5mj (ENSMMDG00005020147) GAREM2 (ENSMMDG00005020145) hadhaa (ENSMMDG00005020004) ENSMMDG00005019999 hadhb (ENSMMDG00005018017) tfap2d (ENSMMDG00005017956) #21 tfap2b (ENSMMDG00005017943) #22 map3k5 (ENSMMDG00005017836) lrp11 (ENSMMDG00005017821) pcmt (ENSMMDG00005017804) nup43 (ENSMMDG00005017802) lats1 (ENSMMDG00005017801) rab10 (ENSMMDG00005017800) KIF3C (ENSMMDG00005017774) ENSMMDG00005017772 dtnba (ENSMMDG00005017699) dnmt3aa (ENSMMDG00005017623) dpysl5b (ENSMMDG00005017618) mapre3b (ENSMMDG00005017613) tmem214 (ENSMMDG00005016934) ccdc25 (ENSMMDG00005016926) esco2 (ENSMMDG00005016925) Cod MODERN SPECIES 13 SCG5 (ENSGMOG00000001443) ENSGMOG00000001432 ENSGMOG00000035136 ENSGMOG00000001376 tmem214 (ENSGMOG00000018357) ENSGMOG00000018388 dpysl5b (ENSGMOG00000018400) dnmt3aa (ENSGMOG00000018426) dtnba (ENSGMOG00000018464) KIF3C (ENSGMOG00000028919) rab10 (ENSGMOG00000018515) GAREM2 (ENSGMOG00000022304) ENSGMOG00000034882 hadhb (ENSGMOG00000017832) tfap2d (ENSGMOG00000030903) #21 tfap2b (ENSGMOG00000017800) #22 ENSGMOG00000017733 lrp11 (ENSGMOG00000017710) PCMT1 (ENSGMOG00000017692) nup43 (ENSGMOG00000017672) LATS1 (ENSGMOG00000017653) ENSGMOG00000030403 ENSGMOG00000034841 CFAP206 (ENSGMOG00000012916) ENSGMOG00000024555 smim8 (ENSGMOG00000023348) gjb7 (ENSGMOG00000020475) znf292b (ENSGMOG00000036240) HTR1E (ENSGMOG00000032964) ENSGMOG00000024719 ENSGMOG00000013006 Spotted gar MODERN SPECIES 647 ENSLOCG00000016304 ENSLOCG00000016305 stx11a (ENSLOCG00000017995) tmem214 (ENSLOCG00000016307) mapre3b (ENSLOCG00000016310) dpysl5a (ENSLOCG00000016314) dnmt3ab (ENSLOCG00000016317) dtnbb (ENSLOCG00000016318) ASXL2 (ENSLOCG00000016319) KIF3C (ENSLOCG00000016321) rab10 (ENSLOCG00000016323) GAREM2 (ENSLOCG00000016328) hadhab (ENSLOCG00000016329) hadhb (ENSLOCG00000016333) tfap2d (ENSLOCG00000016336) #21 tfap2b (ENSLOCG00000016338) #22 ENSLOCG00000016341 ENSLOCG00000016342 #10 CRISP1 (ENSLOCG00000016346) #17 rhag (ENSLOCG00000016348) #9 si:ch211-22i13.2 (ENSLOCG00000016352) rd3 (ENSLOCG00000016354) slc30a1a (ENSLOCG00000016355) nek2 (ENSLOCG00000016356) lpgat1 (ENSLOCG00000016357) ints7 (ENSLOCG00000016358) dtl (ENSLOCG00000016359) PPP2R5A (ENSLOCG00000016361) pacc1 (ENSLOCG00000016363) nenf (ENSLOCG00000016364) opn8c (ENSLOCG00000016365) Elephant shark MODERN SPECIES 1511 ENSCMIG00000015531 ENSCMIG00000015536 usp45 (ENSCMIG00000015574) ENSCMIG00000015637 ccnc (ENSCMIG00000015645) ngs (ENSCMIG00000015651) prdm13 (ENSCMIG00000015654) MCHR2 (ENSCMIG00000015655) SNAP91 (ENSCMIG00000015750) ENSCMIG00000016030 prss35 (ENSCMIG00000016034) me1 (ENSCMIG00000016056) ENSCMIG00000016098 ENSCMIG00000016100 tfap2d (ENSCMIG00000016101) #21 tfap2b (ENSCMIG00000016103) #22 ENSCMIG00000016105 ENSCMIG00000016107 eif2b4 (ENSCMIG00000016132) snx17 (ENSCMIG00000016186) ENSCMIG00000016194 ENSCMIG00000016200 TNFAIP3 (ENSCMIG00000016215) ENSCMIG00000016220 ENSCMIG00000016222 ENSCMIG00000016227 ENSCMIG00000016230 SLC35D3 (ENSCMIG00000016233) pex7 (ENSCMIG00000016246) MAP3K5 (ENSCMIG00000016309) ENSCMIG00000016396 Gnathostomata ANCESTRAL SPECIES 901 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 Euteleostomi ANCESTRAL SPECIES 112 ENSGT00940000157491 ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D Sarcopterygii ANCESTRAL SPECIES 53 ENSGT01030000234513.A.a.a.a.b ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00390000003465.b.a ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Tetrapoda ANCESTRAL SPECIES 60 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00390000003465.b.a ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Anura ANCESTRAL SPECIES 132 ENSGT00940000154325.b ENSGT00940000156221.p ENSGT00940000159513 ENSGT00390000003465.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000158915 Frog MODERN SPECIES 2 matn1 (ENSXETG00000005940) laptm5 (ENSXETG00000024817) sdc3 (ENSXETG00000007104) atp5if1 (ENSXETG00000007103) hnrnpr (ENSXETG00000007102) htr1d (ENSXETG00000047747) ENSXETG00000043659 dlgap3 (ENSXETG00000007097) ENSXETG00000047451 tmem35b (ENSXETG00000007096) sfpq (ENSXETG00000009682) znf706l (ENSXETG00000027722) zmym4 (ENSXETG00000009675) kiaa0319l (ENSXETG00000039085) ncdn (ENSXETG00000009669) tfap2e (ENSXETG00000027719) ##21 c1orf216 (ENSXETG00000009667) ago4 (ENSXETG00000009664) clspn (ENSXETG00000009662) psmb2 (ENSXETG00000009668) ago1 (ENSXETG00000004364) ago3 (ENSXETG00000042716) tekt2 (ENSXETG00000004373) adprs (ENSXETG00000004374) col8a2 (ENSXETG00000004376) trappc3 (ENSXETG00000004378) ENSXETG00000004379 map7d1 (ENSXETG00000004382) ENSXETG00000047207 thrap3 (ENSXETG00000003925) sh3d21 (ENSXETG00000030848) Amniota ANCESTRAL SPECIES 39 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Mammalia ANCESTRAL SPECIES 19 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Theria ANCESTRAL SPECIES 36 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Eutheria ANCESTRAL SPECIES ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Boreoeutheria ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Laurasiatheria ANCESTRAL SPECIES ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000168963 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182848.c.b.b.a ##21 Hedgehog MODERN SPECIES 1848 ENSEEUG00000012753 ##21 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Laurasiatheria_b ANCESTRAL SPECIES ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Carnivora ANCESTRAL SPECIES 1 ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Caniformia ANCESTRAL SPECIES 2 ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Canidae ANCESTRAL SPECIES 12 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Canis_lupus ANCESTRAL SPECIES 16 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738.k ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Dingo MODERN SPECIES 344 HMGB4 (ENSCAFG00020010772) ENSCAFG00020010767 GJB5 (ENSCAFG00020010763) GJB4 (ENSCAFG00020010760) GJB3 (ENSCAFG00020010757) GJA4 (ENSCAFG00020010754) ENSCAFG00020010750 SMIM12 (ENSCAFG00020010747) ENSCAFG00020010745 DLGAP3 (ENSCAFG00020010742) ZMYM6 (ENSCAFG00020010705) ENSCAFG00020010702 ZMYM4 (ENSCAFG00020009999) KIAA0319L (ENSCAFG00020009949) NCDN (ENSCAFG00020009945) TFAP2E (ENSCAFG00020009931) ##21 PSMB2 (ENSCAFG00020009927) ENSCAFG00020009913 ENSCAFG00020009910 AGO1 (ENSCAFG00020009251) AGO3 (ENSCAFG00020009051) TEKT2 (ENSCAFG00020009035) ADPRS (ENSCAFG00020009028) COL8A2 (ENSCAFG00020009026) TRAPPC3 (ENSCAFG00020009022) MAP7D1 (ENSCAFG00020009006) THRAP3 (ENSCAFG00020008982) ENSCAFG00020008975 SH3D21 (ENSCAFG00020008955) STK40 (ENSCAFG00020008930) LSM10 (ENSCAFG00020008920) Dog MODERN SPECIES 6 ENSCAFG00845015809 C1orf94 (ENSCAFG00845015523) GJB5 (ENSCAFG00845015493) GJB4 (ENSCAFG00845015477) GJB3 (ENSCAFG00845015452) ENSCAFG00845015430 GJA4 (ENSCAFG00845015410) SMIM12 (ENSCAFG00845015395) DLGAP3 (ENSCAFG00845015341) ZMYM6 (ENSCAFG00845015247) ZMYM1 (ENSCAFG00845015149) ENSCAFG00845015011 ZMYM4 (ENSCAFG00845014825) KIAA0319L (ENSCAFG00845014738) NCDN (ENSCAFG00845014699) TFAP2E (ENSCAFG00845014665) ##21 PSMB2 (ENSCAFG00845014631) C15H1orf216 (ENSCAFG00845014608) CLSPN (ENSCAFG00845014565) AGO1 (ENSCAFG00845030992) AGO3 (ENSCAFG00845030956) ADPRHL2 (ENSCAFG00845030916) COL8A2 (ENSCAFG00845030898) TRAPPC3 (ENSCAFG00845030892) THRAP3 (ENSCAFG00845030875) ENSCAFG00845030851 ENSCAFG00845030827 ENSCAFG00845030799 STK40 (ENSCAFG00845030786) LSM10 (ENSCAFG00845030776) OSCP1 (ENSCAFG00845030771) Caniformia_b ANCESTRAL SPECIES 1 ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Mustelinae ANCESTRAL SPECIES ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b American mink MODERN SPECIES 99 GJB5 (ENSNVIG00000011508) GJB4 (ENSNVIG00000011511) ENSNVIG00000011514 GJB3 (ENSNVIG00000011521) GJA4 (ENSNVIG00000011540) CA212 (ENSNVIG00000011547) DLGAP3 (ENSNVIG00000011564) TMEM35B (ENSNVIG00000011594) ZMYM6 (ENSNVIG00000011609) ZMYM1 (ENSNVIG00000011646) SFPQ (ENSNVIG00000011654) ZMYM4 (ENSNVIG00000011677) KIAA0319L (ENSNVIG00000011748) NCDN (ENSNVIG00000011790) TFAP2E (ENSNVIG00000011827) ##21 PSMB2 (ENSNVIG00000011855) CA216 (ENSNVIG00000011868) CLSPN (ENSNVIG00000011881) AGO1 (ENSNVIG00000012004) ENSNVIG00000012133 TEKT2 (ENSNVIG00000012158) ADPRS (ENSNVIG00000012218) COL8A2 (ENSNVIG00000012227) TPPC3 (ENSNVIG00000012239) MAP7D1 (ENSNVIG00000012295) THRAP3 (ENSNVIG00000012429) ENSNVIG00000012530 EVA1B (ENSNVIG00000012547) STK40 (ENSNVIG00000012562) LSM10 (ENSNVIG00000012589) Ferret MODERN SPECIES 167 CSMD2 (ENSMPUG00000014956) HMGB4 (ENSMPUG00000018611) C1orf94 (ENSMPUG00000014954) GJB5 (ENSMPUG00000018608) GJB4 (ENSMPUG00000018605) GJB3 (ENSMPUG00000018603) GJA4 (ENSMPUG00000018601) SMIM12 (ENSMPUG00000018598) DLGAP3 (ENSMPUG00000014953) ENSMPUG00000014941 ZMYM1 (ENSMPUG00000014937) ENSMPUG00000014931 ZMYM4 (ENSMPUG00000014924) KIAA0319L (ENSMPUG00000014917) NCDN (ENSMPUG00000014913) TFAP2E (ENSMPUG00000014894) ##21 PSMB2 (ENSMPUG00000014891) C1orf216 (ENSMPUG00000018596) CLSPN (ENSMPUG00000014881) AGO4 (ENSMPUG00000014876) AGO1 (ENSMPUG00000014872) ENSMPUG00000014871 TEKT2 (ENSMPUG00000014823) ADPRS (ENSMPUG00000014821) COL8A2 (ENSMPUG00000014818) TRAPPC3 (ENSMPUG00000014815) ENSMPUG00000018594 MAP7D1 (ENSMPUG00000014812) THRAP3 (ENSMPUG00000014809) ENSMPUG00000014783 EVA1B (ENSMPUG00000014781) Ursidae ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.f ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Giant Panda MODERN SPECIES 11 GJB4 (ENSAMEG00000018567) ENSAMEG00000030309 ENSAMEG00000028406 GJB3 (ENSAMEG00000018560) GJA4 (ENSAMEG00000018550) ENSAMEG00000029326 DLGAP3 (ENSAMEG00000000892) ENSAMEG00000029903 TMEM35B (ENSAMEG00000000890) ZMYM6 (ENSAMEG00000000868) ZMYM1 (ENSAMEG00000000859) SFPQ (ENSAMEG00000000815) ZMYM4 (ENSAMEG00000000760) KIAA0319L (ENSAMEG00000000737) NCDN (ENSAMEG00000000724) TFAP2E (ENSAMEG00000028474) ##21 PSMB2 (ENSAMEG00000000715) C1orf216 (ENSAMEG00000018544) CLSPN (ENSAMEG00000000679) AGO4 (ENSAMEG00000000573) AGO1 (ENSAMEG00000000504) AGO3 (ENSAMEG00000000497) TEKT2 (ENSAMEG00000000473) ADPRS (ENSAMEG00000025564) COL8A2 (ENSAMEG00000000461) TRAPPC3 (ENSAMEG00000000457) MAP7D1 (ENSAMEG00000000412) ENSAMEG00000024644 ENSAMEG00000028122 ENSAMEG00000001385 EVA1B (ENSAMEG00000031396) Ursus ANCESTRAL SPECIES ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.f ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Polar bear MODERN SPECIES 189 ENSUMAG00000008148 GJB5 (ENSUMAG00000008137) ENSUMAG00000008132 GJB4 (ENSUMAG00000008127) GJB3 (ENSUMAG00000008123) GJA4 (ENSUMAG00000008121) ENSUMAG00000008116 SMIM12 (ENSUMAG00000008110) ZMYM6 (ENSUMAG00000008096) ZMYM1 (ENSUMAG00000008070) ENSUMAG00000008056 ZMYM4 (ENSUMAG00000007600) KIAA0319L (ENSUMAG00000007562) ENSUMAG00000007559 NCDN (ENSUMAG00000007557) TFAP2E (ENSUMAG00000007555) ##21 PSMB2 (ENSUMAG00000007547) C1orf216 (ENSUMAG00000007539) ENSUMAG00000007536 ENSUMAG00000007529 AGO4 (ENSUMAG00000006297) AGO1 (ENSUMAG00000002480) ENSUMAG00000002065 ENSUMAG00000002033 TEKT2 (ENSUMAG00000002004) ADPRS (ENSUMAG00000001988) COL8A2 (ENSUMAG00000001984) TRAPPC3 (ENSUMAG00000001979) MAP7D1 (ENSUMAG00000001773) THRAP3 (ENSUMAG00000001744) ENSUMAG00000001726 Felidae ANCESTRAL SPECIES 18 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Cat MODERN SPECIES 239 GJB5 (ENSFCAG00000014053) GJB4 (ENSFCAG00000014054) GJA4 (ENSFCAG00000014056) ENSFCAG00000045489 SMIM12 (ENSFCAG00000022713) DLGAP3 (ENSFCAG00000014060) ENSFCAG00000042433 TMEM35B (ENSFCAG00000027437) ZMYM6 (ENSFCAG00000029307) ZMYM1 (ENSFCAG00000024439) SFPQ (ENSFCAG00000042862) ZMYM4 (ENSFCAG00000029162) KIAA0319L (ENSFCAG00000013873) ENSFCAG00000038220 NCDN (ENSFCAG00000013876) TFAP2E (ENSFCAG00000013878) ##21 PSMB2 (ENSFCAG00000030845) CC1H1orf216 (ENSFCAG00000013881) CLSPN (ENSFCAG00000013882) AGO4 (ENSFCAG00000006218) AGO1 (ENSFCAG00000000746) AGO3 (ENSFCAG00000000747) TEKT2 (ENSFCAG00000012461) ADPRS (ENSFCAG00000012465) COL8A2 (ENSFCAG00000042990) TRAPPC3 (ENSFCAG00000043644) MAP7D1 (ENSFCAG00000012469) THRAP3 (ENSFCAG00000014127) SH3D21 (ENSFCAG00000051592) EVA1B (ENSFCAG00000026800) STK40 (ENSFCAG00000005262) Panthera ANCESTRAL SPECIES 4 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Panthera_a ANCESTRAL SPECIES 14 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b lion MODERN SPECIES 8 CSMD2 (ENSPLOG00000004921) C1orf94 (ENSPLOG00000004886) GJB5 (ENSPLOG00000004875) GJB4 (ENSPLOG00000004869) GJB3 (ENSPLOG00000004860) GJA4 (ENSPLOG00000004855) SMIM12 (ENSPLOG00000004850) DLGAP3 (ENSPLOG00000004837) TMEM35B (ENSPLOG00000004824) ZMYM6 (ENSPLOG00000004801) ZMYM1 (ENSPLOG00000004786) SFPQ (ENSPLOG00000004767) ZMYM4 (ENSPLOG00000004756) KIAA0319L (ENSPLOG00000022058) NCDN (ENSPLOG00000022040) TFAP2E (ENSPLOG00000022025) ##21 PSMB2 (ENSPLOG00000022003) C1orf216 (ENSPLOG00000021988) ENSPLOG00000021982 CLSPN (ENSPLOG00000021959) AGO1 (ENSPLOG00000021894) AGO4 (ENSPLOG00000021693) ENSPLOG00000021615 TEKT2 (ENSPLOG00000021579) ADPRS (ENSPLOG00000021546) COL8A2 (ENSPLOG00000021527) TRAPPC3 (ENSPLOG00000021495) MAP7D1 (ENSPLOG00000021300) THRAP3 (ENSPLOG00000021215) ENSPLOG00000021161 EVA1B (ENSPLOG00000021132) leopard MODERN SPECIES 130 ENSPPRG00000015478 ZMYM4 (ENSPPRG00000013260) KIAA0319L (ENSPPRG00000012492) ENSPPRG00000011950 NCDN (ENSPPRG00000010663) TFAP2E (ENSPPRG00000010109) ##21 PSMB2 (ENSPPRG00000009440) C1orf216 (ENSPPRG00000015355) CLSPN (ENSPPRG00000008963) AGO4 (ENSPPRG00000006520) AGO1 (ENSPPRG00000006475) AGO3 (ENSPPRG00000005934) TEKT2 (ENSPPRG00000005344) ADPRS (ENSPPRG00000004988) COL8A2 (ENSPPRG00000004825) TRAPPC3 (ENSPPRG00000004660) MAP7D1 (ENSPPRG00000003580) THRAP3 (ENSPPRG00000001735) SH3D21 (ENSPPRG00000001082) EVA1B (ENSPPRG00000023067) STK40 (ENSPPRG00000023089) Tiger MODERN SPECIES 383 ENSPTIG00000013436 C1orf94 (ENSPTIG00000013954) GJB5 (ENSPTIG00000002883) GJB4 (ENSPTIG00000002887) GJB3 (ENSPTIG00000002899) GJA4 (ENSPTIG00000002930) SMIM12 (ENSPTIG00000002947) DLGAP3 (ENSPTIG00000017431) TMEM35B (ENSPTIG00000019528) ZMYM6 (ENSPTIG00000020730) ZMYM1 (ENSPTIG00000005021) ENSPTIG00000007710 ZMYM4 (ENSPTIG00000008677) KIAA0319L (ENSPTIG00000011048) NCDN (ENSPTIG00000012074) TFAP2E (ENSPTIG00000014612) ##21 PSMB2 (ENSPTIG00000015407) C1orf216 (ENSPTIG00000003921) CLSPN (ENSPTIG00000016555) AGO4 (ENSPTIG00000020262) AGO1 (ENSPTIG00000020991) AGO3 (ENSPTIG00000001029) TEKT2 (ENSPTIG00000009996) ADPRS (ENSPTIG00000010575) COL8A2 (ENSPTIG00000011151) TRAPPC3 (ENSPTIG00000011666) MAP7D1 (ENSPTIG00000012934) THRAP3 (ENSPTIG00000016888) SH3D21 (ENSPTIG00000017828) ENSPTIG00000020226 STK40 (ENSPTIG00000020622) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Equus ANCESTRAL SPECIES 2 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Donkey MODERN SPECIES 25 C1orf94 (ENSEASG00005011987) ENSEASG00005006615 GJB5 (ENSEASG00005011990) ENSEASG00005027012 GJB3 (ENSEASG00005038362) GJA4 (ENSEASG00005035337) ENSEASG00005031601 DLGAP3 (ENSEASG00005011999) ENSEASG00005038698 ZMYM6 (ENSEASG00005012005) ZMYM1 (ENSEASG00005012007) SFPQ (ENSEASG00005012012) ZMYM4 (ENSEASG00005012020) KIAA0319L (ENSEASG00005012027) NCDN (ENSEASG00005012034) TFAP2E (ENSEASG00005012037) ##21 PSMB2 (ENSEASG00005012040) C1orf216 (ENSEASG00005029553) CLSPN (ENSEASG00005012055) AGO4 (ENSEASG00005012079) AGO1 (ENSEASG00005012086) AGO3 (ENSEASG00005012089) TEKT2 (ENSEASG00005012098) ADPRS (ENSEASG00005012163) COL8A2 (ENSEASG00005012168) TRAPPC3 (ENSEASG00005038259) MAP7D1 (ENSEASG00005012176) THRAP3 (ENSEASG00005012182) ENSEASG00005012187 EVA1B (ENSEASG00005012191) STK40 (ENSEASG00005012192) Horse MODERN SPECIES 11 CSMD2 (ENSECAG00000041448) C2H1orf94 (ENSECAG00000023699) GJB5 (ENSECAG00000050716) GJB3 (ENSECAG00000005150) ENSECAG00000057585 GJA4 (ENSECAG00000023685) SMIM12 (ENSECAG00000023494) DLGAP3 (ENSECAG00000018778) ZMYM6 (ENSECAG00000012042) ENSECAG00000048100 SFPQ (ENSECAG00000000642) ENSECAG00000055111 ZMYM4 (ENSECAG00000008800) NCDN (ENSECAG00000008891) KIAA0319L (ENSECAG00000012927) TFAP2E (ENSECAG00000003027) ##21 PSMB2 (ENSECAG00000021615) C2H1orf216 (ENSECAG00000005102) CLSPN (ENSECAG00000009472) AGO4 (ENSECAG00000023972) AGO1 (ENSECAG00000024353) AGO3 (ENSECAG00000051188) TEKT2 (ENSECAG00000017670) ADPRS (ENSECAG00000013445) COL8A2 (ENSECAG00000012799) TRAPPC3 (ENSECAG00000012569) MAP7D1 (ENSECAG00000001581) THRAP3 (ENSECAG00000021207) SH3D21 (ENSECAG00000020556) STK40 (ENSECAG00000015678) LSM10 (ENSECAG00000005071) Chiroptera ANCESTRAL SPECIES ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Megabat MODERN SPECIES 3057 ZMYM1 (ENSPVAG00000001864) SFPQ (ENSPVAG00000001865) ZMYM4 (ENSPVAG00000001866) KIAA0319L (ENSPVAG00000001867) NCDN (ENSPVAG00000001868) TFAP2E (ENSPVAG00000001869) ##21 PSMB2 (ENSPVAG00000001871) C1orf216 (ENSPVAG00000001873) CLSPN (ENSPVAG00000001874) Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Greater horseshoe bat MODERN SPECIES 27 CSMD2 (ENSRFEG00010000787) HMGB4 (ENSRFEG00010000993) C1orf94 (ENSRFEG00010001007) GJB5 (ENSRFEG00010001039) GJB4 (ENSRFEG00010001056) GJB3 (ENSRFEG00010001088) GJA4 (ENSRFEG00010001099) ENSRFEG00010001106 DLGAP3 (ENSRFEG00010001124) ZMYM6 (ENSRFEG00010001182) ZMYM1 (ENSRFEG00010001213) SFPQ (ENSRFEG00010001256) ZMYM4 (ENSRFEG00010001311) KIAA0319L (ENSRFEG00010001380) NCDN (ENSRFEG00010001441) TFAP2E (ENSRFEG00010001481) ##21 ENSRFEG00010001507 C1orf216 (ENSRFEG00010001522) CLSPN (ENSRFEG00010001591) AGO4 (ENSRFEG00010001742) AGO1 (ENSRFEG00010001802) AGO3 (ENSRFEG00010001891) TEKT2 (ENSRFEG00010001943) ADPRS (ENSRFEG00010001958) COL8A2 (ENSRFEG00010001979) TRAPPC3 (ENSRFEG00010002008) MAP7D1 (ENSRFEG00010002111) THRAP3 (ENSRFEG00010002289) ENSRFEG00010002356 EVA1B (ENSRFEG00010002372) STK40 (ENSRFEG00010002403) Microbat MODERN SPECIES 1068 GJB5 (ENSMLUG00000015470) GJB4 (ENSMLUG00000015467) GJB3 (ENSMLUG00000015464) GJA4 (ENSMLUG00000027855) ENSMLUG00000023367 DLGAP3 (ENSMLUG00000013681) TMEM35B (ENSMLUG00000029662) ENSMLUG00000024173 ENSMLUG00000013694 ZMYM1 (ENSMLUG00000013712) SFPQ (ENSMLUG00000027090) ZMYM4 (ENSMLUG00000004018) ENSMLUG00000026401 KIAA0319L (ENSMLUG00000004024) NCDN (ENSMLUG00000009374) TFAP2E (ENSMLUG00000009852) ##21 PSMB2 (ENSMLUG00000009862) C1orf216 (ENSMLUG00000017091) CLSPN (ENSMLUG00000017093) AGO4 (ENSMLUG00000017102) AGO1 (ENSMLUG00000009628) AGO3 (ENSMLUG00000009668) TEKT2 (ENSMLUG00000011491) ADPRS (ENSMLUG00000027862) COL8A2 (ENSMLUG00000011023) TRAPPC3 (ENSMLUG00000002140) MAP7D1 (ENSMLUG00000012362) THRAP3 (ENSMLUG00000006447) ENSMLUG00000006453 ENSMLUG00000006458 EVA1B (ENSMLUG00000024745) Artiodactyla ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Suina ANCESTRAL SPECIES 10 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Chacoan peccary MODERN SPECIES 39 GJB4 (ENSCWAG00000010317) GJB3 (ENSCWAG00000010313) ENSCWAG00000010289 GJA4 (ENSCWAG00000010269) SMIM12 (ENSCWAG00000010260) DLGAP3 (ENSCWAG00000010167) ENSCWAG00000010140 TMEM35B (ENSCWAG00000010108) ZMYM6 (ENSCWAG00000010047) ZMYM1 (ENSCWAG00000010008) SFPQ (ENSCWAG00000009898) ZMYM4 (ENSCWAG00000009815) ENSCWAG00000009794 KIAA0319L (ENSCWAG00000009706) NCDN (ENSCWAG00000009618) TFAP2E (ENSCWAG00000009465) ##21 PSMB2 (ENSCWAG00000009415) C1orf216 (ENSCWAG00000009403) CLSPN (ENSCWAG00000009253) ENSCWAG00000009201 AGO4 (ENSCWAG00000009127) AGO1 (ENSCWAG00000009026) ENSCWAG00000008976 ENSCWAG00000008735 TEKT2 (ENSCWAG00000008694) ADPRS (ENSCWAG00000008618) COL8A2 (ENSCWAG00000008567) TRAPPC3 (ENSCWAG00000008474) MAP7D1 (ENSCWAG00000008245) THRAP3 (ENSCWAG00000008133) ENSCWAG00000008017 Pig MODERN SPECIES 14 GJB3 (ENSSSCG00000038677) GJA4 (ENSSSCG00000039983) SMIM12 (ENSSSCG00000053136) DLGAP3 (ENSSSCG00000040173) ENSSSCG00000051533 TMEM35B (ENSSSCG00000032660) ZMYM6 (ENSSSCG00000034618) ENSSSCG00000050214 ZMYM1 (ENSSSCG00000034292) ENSSSCG00000032016 SFPQ (ENSSSCG00000035690) ZMYM4 (ENSSSCG00000003627) KIAA0319L (ENSSSCG00000037121) ENSSSCG00000062913 NCDN (ENSSSCG00000031786) TFAP2E (ENSSSCG00000040097) ##21 PSMB2 (ENSSSCG00000035914) ENSSSCG00000037699 C1orf216 (ENSSSCG00000037600) CLSPN (ENSSSCG00000003628) AGO3 (ENSSSCG00000003630) ENSSSCG00000055207 ENSSSCG00000003632 TEKT2 (ENSSSCG00000003633) ADPRS (ENSSSCG00000003634) COL8A2 (ENSSSCG00000033641) TRAPPC3 (ENSSSCG00000037213) MAP7D1 (ENSSSCG00000003637) THRAP3 (ENSSSCG00000029954) ENSSSCG00000028892 EVA1B (ENSSSCG00000033892) Artiodactyla_a ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Artiodactyla_b ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Cetacea ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000160627 Odontoceti ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000160627 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000160627 Odontoceti_b ANCESTRAL SPECIES ENSGT00390000009067.i ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a Monodontidae ANCESTRAL SPECIES ENSGT00390000017672 ENSGT00390000009067.i ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435.h.a ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a Beluga whale MODERN SPECIES 74 ENSDLEG00000020474 ENSDLEG00000020478 GJB5 (ENSDLEG00000020483) ENSDLEG00000020485 GJB3 (ENSDLEG00000020487) GJA4 (ENSDLEG00000020489) ENSDLEG00000020493 DLGAP3 (ENSDLEG00000020495) TMEM35B (ENSDLEG00000020501) ZMYM6 (ENSDLEG00000020503) ZMYM1 (ENSDLEG00000020518) SFPQ (ENSDLEG00000020526) ZMYM4 (ENSDLEG00000020543) KIAA0319L (ENSDLEG00000020588) NCDN (ENSDLEG00000020601) TFAP2E (ENSDLEG00000020609) ##21 PSMB2 (ENSDLEG00000020616) CUNH1orf216 (ENSDLEG00000020623) CLSPN (ENSDLEG00000020638) AGO4 (ENSDLEG00000020706) AGO1 (ENSDLEG00000020718) AGO3 (ENSDLEG00000020726) ENSDLEG00000020733 TEKT2 (ENSDLEG00000020737) COL8A2 (ENSDLEG00000020743) TRAPPC3 (ENSDLEG00000020746) MAP7D1 (ENSDLEG00000020755) THRAP3 (ENSDLEG00000020766) ENSDLEG00000020772 EVA1B (ENSDLEG00000020774) STK40 (ENSDLEG00000020778) Narwhal MODERN SPECIES 304 CSMD2 (ENSMMNG00015009910) C1orf94 (ENSMMNG00015009813) GJB5 (ENSMMNG00015009803) GJB3 (ENSMMNG00015009790) ENSMMNG00015009779 GJA4 (ENSMMNG00015009764) ENSMMNG00015009760 DLGAP3 (ENSMMNG00015009747) TMEM35B (ENSMMNG00015009734) ZMYM6 (ENSMMNG00015009706) ZMYM1 (ENSMMNG00015009679) SFPQ (ENSMMNG00015009628) ZMYM4 (ENSMMNG00015009519) KIAA0319L (ENSMMNG00015009434) NCDN (ENSMMNG00015009414) TFAP2E (ENSMMNG00015009400) ##21 PSMB2 (ENSMMNG00015009386) C1orf216 (ENSMMNG00015009379) CLSPN (ENSMMNG00015009362) AGO1 (ENSMMNG00015009304) AGO4 (ENSMMNG00015009235) ENSMMNG00015009200 ENSMMNG00015009194 TEKT2 (ENSMMNG00015009187) ADPRS (ENSMMNG00015009176) COL8A2 (ENSMMNG00015009172) TRAPPC3 (ENSMMNG00015009162) MAP7D1 (ENSMMNG00015009143) THRAP3 (ENSMMNG00015009123) ENSMMNG00015009102 EVA1B (ENSMMNG00015009093) Vaquita MODERN SPECIES HMGB4 (ENSPSNG00000013604) C1orf94 (ENSPSNG00000013629) ENSPSNG00000013818 GJB5 (ENSPSNG00000013874) GJB3 (ENSPSNG00000013895) GJA4 (ENSPSNG00000013929) DLGAP3 (ENSPSNG00000013987) ENSPSNG00000014135 TMEM35B (ENSPSNG00000014162) ZMYM6 (ENSPSNG00000014255) ZMYM1 (ENSPSNG00000014376) SFPQ (ENSPSNG00000014499) ZMYM4 (ENSPSNG00000014647) KIAA0319L (ENSPSNG00000014729) NCDN (ENSPSNG00000014884) TFAP2E (ENSPSNG00000015021) ##21 PSMB2 (ENSPSNG00000015130) C1orf216 (ENSPSNG00000015213) CLSPN (ENSPSNG00000015267) AGO4 (ENSPSNG00000015400) AGO1 (ENSPSNG00000015633) AGO3 (ENSPSNG00000015767) ENSPSNG00000015925 TEKT2 (ENSPSNG00000016008) ADPRS (ENSPSNG00000016066) COL8A2 (ENSPSNG00000016120) TRAPPC3 (ENSPSNG00000016166) MAP7D1 (ENSPSNG00000016291) THRAP3 (ENSPSNG00000016451) ENSPSNG00000016520 EVA1B (ENSPSNG00000016616) Dolphin MODERN SPECIES 913 ZMYM4 (ENSTTRG00000007245) KIAA0319L (ENSTTRG00000007248) NCDN (ENSTTRG00000007255) TFAP2E (ENSTTRG00000007258) ##21 PSMB2 (ENSTTRG00000007260) Sperm whale MODERN SPECIES 14 CSMD2 (ENSPCTG00005004537) C1orf94 (ENSPCTG00005004350) GJB5 (ENSPCTG00005004331) GJB4 (ENSPCTG00005004313) GJB3 (ENSPCTG00005004304) GJA4 (ENSPCTG00005004297) SMIM12 (ENSPCTG00005004287) DLGAP3 (ENSPCTG00005004257) ENSPCTG00005004241 TMEM35B (ENSPCTG00005004232) ZMYM6 (ENSPCTG00005004181) ZMYM1 (ENSPCTG00005004150) ZMYM4 (ENSPCTG00005004111) KIAA0319L (ENSPCTG00005004092) NCDN (ENSPCTG00005004075) TFAP2E (ENSPCTG00005004064) ##21 PSMB2 (ENSPCTG00005004049) CLSPN (ENSPCTG00005004034) AGO4 (ENSPCTG00005004016) AGO1 (ENSPCTG00005003991) AGO3 (ENSPCTG00005003950) ENSPCTG00005003935 ADPRHL2 (ENSPCTG00005003914) COL8A2 (ENSPCTG00005003905) ENSPCTG00005003892 EVA1B (ENSPCTG00005003886) STK40 (ENSPCTG00005003877) LSM10 (ENSPCTG00005003868) OSCP1 (ENSPCTG00005003848) GRIK3 (ENSPCTG00005003798) ENSPCTG00005003777 Blue whale MODERN SPECIES HMGB4 (ENSBMSG00010000647) C1orf94 (ENSBMSG00010000663) GJB5 (ENSBMSG00010000686) GJB4 (ENSBMSG00010000698) GJB3 (ENSBMSG00010000711) GJA4 (ENSBMSG00010000720) ENSBMSG00010000742 DLGAP3 (ENSBMSG00010000752) TMEM35B (ENSBMSG00010000769) ZMYM6 (ENSBMSG00010000781) ZMYM1 (ENSBMSG00010000796) SFPQ (ENSBMSG00010000825) ZMYM4 (ENSBMSG00010000862) KIAA0319L (ENSBMSG00010000897) NCDN (ENSBMSG00010000921) TFAP2E (ENSBMSG00010000953) ##21 PSMB2 (ENSBMSG00010000988) C1orf216 (ENSBMSG00010001008) CLSPN (ENSBMSG00010001054) AGO4 (ENSBMSG00010001125) AGO1 (ENSBMSG00010001153) AGO3 (ENSBMSG00010001203) ENSBMSG00010001236 TEKT2 (ENSBMSG00010001253) ADPRS (ENSBMSG00010001262) COL8A2 (ENSBMSG00010001272) TRAPPC3 (ENSBMSG00010001294) MAP7D1 (ENSBMSG00010001348) THRAP3 (ENSBMSG00010001398) EVA1B (ENSBMSG00010001412) STK40 (ENSBMSG00010001425) Pecora ANCESTRAL SPECIES 2 ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Yarkand deer MODERN SPECIES 12 ENSCHYG00000005532 GJB5 (ENSCHYG00000005520) GJB4 (ENSCHYG00000005507) GJB3 (ENSCHYG00000005490) GJA4 (ENSCHYG00000005479) SMIM12 (ENSCHYG00000005462) DLGAP3 (ENSCHYG00000005422) TMEM35B (ENSCHYG00000005383) ZMYM6 (ENSCHYG00000005306) ZMYM1 (ENSCHYG00000005178) SFPQ (ENSCHYG00000027080) ENSCHYG00000027078 ZMYM4 (ENSCHYG00000027077) KIAA0319L (ENSCHYG00000027073) NCDN (ENSCHYG00000027067) TFAP2E (ENSCHYG00000027065) ##21 PSMB2 (ENSCHYG00000027060) C1orf216 (ENSCHYG00000027059) CLSPN (ENSCHYG00000027053) ENSCHYG00000027052 AGO4 (ENSCHYG00000027041) ENSCHYG00000027036 AGO3 (ENSCHYG00000027029) ENSCHYG00000027026 TEKT2 (ENSCHYG00000027024) ADPRS (ENSCHYG00000027021) COL8A2 (ENSCHYG00000027017) TRAPPC3 (ENSCHYG00000027012) MAP7D1 (ENSCHYG00000027002) ENSCHYG00000026996 THRAP3 (ENSCHYG00000026991) Percora_a ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Siberian musk deer MODERN SPECIES 4 GJB4 (ENSMMSG00000010342) GJB3 (ENSMMSG00000010333) GJA4 (ENSMMSG00000010322) ENSMMSG00000010305 SMIM12 (ENSMMSG00000010292) DLGAP3 (ENSMMSG00000010251) TMEM35B (ENSMMSG00000010228) ZMYM6 (ENSMMSG00000010175) ENSMMSG00000010147 ZMYM1 (ENSMMSG00000010123) SFPQ (ENSMMSG00000010053) ENSMMSG00000010020 ZMYM4 (ENSMMSG00000009791) KIAA0319L (ENSMMSG00000009718) NCDN (ENSMMSG00000009667) TFAP2E (ENSMMSG00000009625) ##21 PSMB2 (ENSMMSG00000009599) C1orf216 (ENSMMSG00000009587) CLSPN (ENSMMSG00000009515) AGO4 (ENSMMSG00000009404) AGO1 (ENSMMSG00000009238) AGO3 (ENSMMSG00000009092) ENSMMSG00000009060 TEKT2 (ENSMMSG00000008997) ADPRS (ENSMMSG00000008967) COL8A2 (ENSMMSG00000008947) TRAPPC3 (ENSMMSG00000008867) MAP7D1 (ENSMMSG00000008733) THRAP3 (ENSMMSG00000008671) SH3D21 (ENSMMSG00000008627) EVA1B (ENSMMSG00000008604) Bovidae ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Caprinae ANCESTRAL SPECIES 2 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Rambouillet Sheep MODERN SPECIES GJB4 (ENSOARG00020009044) ENSOARG00020009068 GJB3 (ENSOARG00020009099) GJA4 (ENSOARG00020009113) SMIM12 (ENSOARG00020009153) DLGAP3 (ENSOARG00020009192) TMEM35B (ENSOARG00020009287) ZMYM6 (ENSOARG00020009325) ZMYM1 (ENSOARG00020009503) SFPQ (ENSOARG00020009648) ENSOARG00020009956 ZMYM4 (ENSOARG00020010014) ENSOARG00020010396 KIAA0319L (ENSOARG00020010426) NCDN (ENSOARG00020010602) TFAP2E (ENSOARG00020010658) ##21 PSMB2 (ENSOARG00020010787) C1orf216 (ENSOARG00020010859) CLSPN (ENSOARG00020010932) AGO4 (ENSOARG00020012103) AGO1 (ENSOARG00020012325) AGO3 (ENSOARG00020012702) ENSOARG00020012933 TEKT2 (ENSOARG00020012976) ADPRS (ENSOARG00020013078) COL8A2 (ENSOARG00020013134) TRAPPC3 (ENSOARG00020013190) MAP7D1 (ENSOARG00020013418) THRAP3 (ENSOARG00020013606) ENSOARG00020013812 EVA1B (ENSOARG00020014434) Goat MODERN SPECIES 22 GJB4 (ENSCHIG00000009788) GJB3 (ENSCHIG00000001248) GJA4 (ENSCHIG00000005703) SMIM12 (ENSCHIG00000010474) DLGAP3 (ENSCHIG00000023308) TMEM35B (ENSCHIG00000016269) ZMYM6 (ENSCHIG00000027001) ZMYM1 (ENSCHIG00000025229) SFPQ (ENSCHIG00000023097) ENSCHIG00000012323 ZMYM4 (ENSCHIG00000027080) ENSCHIG00000026273 KIAA0319L (ENSCHIG00000020470) ENSCHIG00000016571 NCDN (ENSCHIG00000026559) TFAP2E (ENSCHIG00000021809) ##21 PSMB2 (ENSCHIG00000016929) C1orf216 (ENSCHIG00000008904) CLSPN (ENSCHIG00000023309) AGO4 (ENSCHIG00000026564) ENSCHIG00000011848 AGO3 (ENSCHIG00000011536) TEKT2 (ENSCHIG00000026732) ADPRS (ENSCHIG00000011636) COL8A2 (ENSCHIG00000023849) TRAPPC3 (ENSCHIG00000015948) MAP7D1 (ENSCHIG00000003118) THRAP3 (ENSCHIG00000022784) ENSCHIG00000018156 EVA1B (ENSCHIG00000011422) STK40 (ENSCHIG00000020883) Bovinae ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a American bison MODERN SPECIES 3081 C1orf94 (ENSBBBG00000021343) ENSBBBG00000021345 GJB5 (ENSBBBG00000021348) GJB4 (ENSBBBG00000021359) GJB3 (ENSBBBG00000021373) GJA4 (ENSBBBG00000021378) SMIM12 (ENSBBBG00000021387) DLGAP3 (ENSBBBG00000021417) ZMYM6 (ENSBBBG00000021438) ZMYM1 (ENSBBBG00000005717) ENSBBBG00000021456 ENSBBBG00000021462 ZMYM4 (ENSBBBG00000021494) KIAA0319L (ENSBBBG00000008471) NCDN (ENSBBBG00000021563) ENSBBBG00000021575 ##21 PSMB2 (ENSBBBG00000021588) C1orf216 (ENSBBBG00000021593) CLSPN (ENSBBBG00000021717) AGO4 (ENSBBBG00000021763) AGO1 (ENSBBBG00000021806) AGO3 (ENSBBBG00000008372) ENSBBBG00000007681 TEKT2 (ENSBBBG00000021903) ADPRS (ENSBBBG00000021910) COL8A2 (ENSBBBG00000021919) TRAPPC3 (ENSBBBG00000021943) MAP7D1 (ENSBBBG00000022091) THRAP3 (ENSBBBG00000022137) ENSBBBG00000022154 EVA1B (ENSBBBG00000007200) Bos ANCESTRAL SPECIES ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00390000003682.gb.b ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.b.b.b.a.b.b.b ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Bos_b ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00390000003682.gb.b ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.b.b.b.a.b.b.b ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Cow MODERN SPECIES 22 CSMD2 (ENSBTAG00000005784) C3H1orf94 (ENSBTAG00000020798) GJB5 (ENSBTAG00000005717) GJB4 (ENSBTAG00000005719) GJB3 (ENSBTAG00000012584) GJA4 (ENSBTAG00000013881) SMIM12 (ENSBTAG00000014235) DLGAP3 (ENSBTAG00000013867) TMEM35B (ENSBTAG00000024086) ZMYM6 (ENSBTAG00000021948) ZMYM1 (ENSBTAG00000006555) SFPQ (ENSBTAG00000016328) ZMYM4 (ENSBTAG00000021023) KIAA0319L (ENSBTAG00000016694) NCDN (ENSBTAG00000016696) TFAP2E (ENSBTAG00000001959) ##21 PSMB2 (ENSBTAG00000002377) C3H1orf216 (ENSBTAG00000038292) CLSPN (ENSBTAG00000002826) AGO4 (ENSBTAG00000015220) AGO1 (ENSBTAG00000012253) AGO3 (ENSBTAG00000018324) ENSBTAG00000055249 TEKT2 (ENSBTAG00000021714) ADPRS (ENSBTAG00000021715) COL8A2 (ENSBTAG00000010175) TRAPPC3 (ENSBTAG00000005732) MAP7D1 (ENSBTAG00000030301) THRAP3 (ENSBTAG00000024095) SH3D21 (ENSBTAG00000038617) EVA1B (ENSBTAG00000014358) Hybrid Bos Indicus MODERN SPECIES 22 GJB5 (ENSBIXG00005026179) GJB4 (ENSBIXG00005006014) GJB3 (ENSBIXG00005006016) GJA4 (ENSBIXG00005026208) ENSBIXG00005026251 DLGAP3 (ENSBIXG00005026281) TMEM35B (ENSBIXG00005004486) ZMYM6 (ENSBIXG00005026397) ZMYM1 (ENSBIXG00005026480) SFPQ (ENSBIXG00005026544) ENSBIXG00005026569 ENSBIXG00005026579 ZMYM4 (ENSBIXG00005004548) NCDN (ENSBIXG00005026659) KIAA0319L (ENSBIXG00005026746) TFAP2E (ENSBIXG00005026820) ##21 PSMB2 (ENSBIXG00005026844) C1orf216 (ENSBIXG00005026857) CLSPN (ENSBIXG00005004592) ENSBIXG00005026903 ENSBIXG00005026911 AGO1 (ENSBIXG00005026944) ENSBIXG00005026966 AGO3 (ENSBIXG00005027246) ENSBIXG00005005614 TEKT2 (ENSBIXG00005027402) COL8A2 (ENSBIXG00005027444) TRAPPC3 (ENSBIXG00005007591) MAP7D1 (ENSBIXG00005027608) THRAP3 (ENSBIXG00005027648) ENSBIXG00005004754 Bos_a ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Domestic yak MODERN SPECIES 22 GJB3 (ENSBGRG00000007611) GJA4 (ENSBGRG00000007563) ENSBGRG00000007485 DLGAP3 (ENSBGRG00000007401) ENSBGRG00000007370 TMEM35B (ENSBGRG00000007252) ZMYM6 (ENSBGRG00000012230) ZMYM1 (ENSBGRG00000011918) SFPQ (ENSBGRG00000011649) ENSBGRG00000011628 ENSBGRG00000011562 ENSBGRG00000011461 ZMYM4 (ENSBGRG00000011314) KIAA0319L (ENSBGRG00000011159) NCDN (ENSBGRG00000010990) TFAP2E (ENSBGRG00000010881) ##21 PSMB2 (ENSBGRG00000010708) C1orf216 (ENSBGRG00000010647) CLSPN (ENSBGRG00000010482) ENSBGRG00000010448 AGO1 (ENSBGRG00000010203) ENSBGRG00000010165 AGO4 (ENSBGRG00000009562) ENSBGRG00000009506 TEKT2 (ENSBGRG00000009332) ADPRS (ENSBGRG00000009212) COL8A2 (ENSBGRG00000009153) TRAPPC3 (ENSBGRG00000009085) MAP7D1 (ENSBGRG00000008399) ENSBGRG00000008330 THRAP3 (ENSBGRG00000008220) Wild yak MODERN SPECIES 504 TMEM35B (ENSBMUG00000021433) ZMYM6 (ENSBMUG00000021455) ZMYM1 (ENSBMUG00000021469) SFPQ (ENSBMUG00000021490) ZMYM4 (ENSBMUG00000021510) ENSBMUG00000021519 KIAA0319L (ENSBMUG00000021533) NCDN (ENSBMUG00000021543) TFAP2E (ENSBMUG00000021558) ##21 PSMB2 (ENSBMUG00000021571) ENSBMUG00000021576 C1orf216 (ENSBMUG00000021588) CLSPN (ENSBMUG00000021706) AGO4 (ENSBMUG00000021730) AGO1 (ENSBMUG00000021749) AGO3 (ENSBMUG00000021761) ENSBMUG00000021797 ENSBMUG00000021805 TEKT2 (ENSBMUG00000021822) ADPRS (ENSBMUG00000021835) COL8A2 (ENSBMUG00000021845) TRAPPC3 (ENSBMUG00000021877) MAP7D1 (ENSBMUG00000021965) THRAP3 (ENSBMUG00000022036) Euarchontoglires ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Primates ANCESTRAL SPECIES 4 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Strepsirrhini ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Lemuriformes ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Mouse lemur MODERN SPECIES 11 ZSCAN20 (ENSMICG00000008314) CSMD2 (ENSMICG00000010396) C1orf94 (ENSMICG00000010438) GJA4 (ENSMICG00000007952) ENSMICG00000046915 DLGAP3 (ENSMICG00000016585) TMEM35B (ENSMICG00000036891) ZMYM6 (ENSMICG00000013831) ZMYM1 (ENSMICG00000043287) ENSMICG00000028212 SFPQ (ENSMICG00000027265) ZMYM4 (ENSMICG00000031294) KIAA0319L (ENSMICG00000006428) ENSMICG00000035693 NCDN (ENSMICG00000006440) TFAP2E (ENSMICG00000046802) ##21 PSMB2 (ENSMICG00000006460) CLSPN (ENSMICG00000005691) AGO4 (ENSMICG00000033507) ENSMICG00000044276 AGO1 (ENSMICG00000016147) AGO3 (ENSMICG00000016158) TEKT2 (ENSMICG00000016171) ADPRS (ENSMICG00000016186) COL8A2 (ENSMICG00000033642) TRAPPC3 (ENSMICG00000016250) MAP7D1 (ENSMICG00000016257) THRAP3 (ENSMICG00000007920) SH3D21 (ENSMICG00000027388) EVA1B (ENSMICG00000044326) STK40 (ENSMICG00000007931) Lemuriformes_a ANCESTRAL SPECIES 58 ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Greater bamboo lemur MODERN SPECIES 686 ENSPSMG00000021237 GJB4 (ENSPSMG00000021230) GJB3 (ENSPSMG00000021222) GJA4 (ENSPSMG00000021216) SMIM12 (ENSPSMG00000021211) ENSPSMG00000021205 DLGAP3 (ENSPSMG00000021200) TMEM35B (ENSPSMG00000021180) ZMYM6 (ENSPSMG00000021165) ZMYM1 (ENSPSMG00000021121) ENSPSMG00000021104 ENSPSMG00000021092 ZMYM4 (ENSPSMG00000021040) KIAA0319L (ENSPSMG00000020937) NCDN (ENSPSMG00000020911) TFAP2E (ENSPSMG00000020882) ##21 PSMB2 (ENSPSMG00000020874) C1orf216 (ENSPSMG00000020860) CLSPN (ENSPSMG00000020850) Coquerels sifaka MODERN SPECIES 257 A3GALT2 (ENSPCOG00000013164) PHC2 (ENSPCOG00000011099) ZSCAN20 (ENSPCOG00000021008) CSMD2 (ENSPCOG00000025738) C1orf94 (ENSPCOG00000020848) SMIM12 (ENSPCOG00000014072) DLGAP3 (ENSPCOG00000022750) TMEM35B (ENSPCOG00000015080) ZMYM6 (ENSPCOG00000028491) ZMYM1 (ENSPCOG00000015612) SFPQ (ENSPCOG00000027127) ENSPCOG00000006560 ZMYM4 (ENSPCOG00000018590) KIAA0319L (ENSPCOG00000025777) NCDN (ENSPCOG00000023262) TFAP2E (ENSPCOG00000017621) ##21 PSMB2 (ENSPCOG00000024983) ENSPCOG00000007974 CLSPN (ENSPCOG00000017966) AGO4 (ENSPCOG00000015935) AGO1 (ENSPCOG00000022061) AGO3 (ENSPCOG00000028390) TEKT2 (ENSPCOG00000026680) ADPRS (ENSPCOG00000015295) COL8A2 (ENSPCOG00000018858) TRAPPC3 (ENSPCOG00000021901) MAP7D1 (ENSPCOG00000024366) ENSPCOG00000028655 THRAP3 (ENSPCOG00000027521) SH3D21 (ENSPCOG00000013355) EVA1B (ENSPCOG00000022411) Bushbaby MODERN SPECIES 140 ENSOGAG00000003527 GJA4 (ENSOGAG00000024379) SMIM12 (ENSOGAG00000028773) DLGAP3 (ENSOGAG00000003530) TMEM35B (ENSOGAG00000031032) ZMYM6 (ENSOGAG00000003533) ENSOGAG00000032030 SFPQ (ENSOGAG00000027710) ZMYM4 (ENSOGAG00000017019) KIAA0319L (ENSOGAG00000002092) NCDN (ENSOGAG00000034366) TFAP2E (ENSOGAG00000029197) ##21 PSMB2 (ENSOGAG00000002097) C1orf216 (ENSOGAG00000004230) CLSPN (ENSOGAG00000004231) ENSOGAG00000032752 ENSOGAG00000004233 AGO1 (ENSOGAG00000010279) AGO3 (ENSOGAG00000010290) TEKT2 (ENSOGAG00000032145) ADPRS (ENSOGAG00000026312) COL8A2 (ENSOGAG00000034217) TRAPPC3 (ENSOGAG00000029810) MAP7D1 (ENSOGAG00000013476) THRAP3 (ENSOGAG00000002648) ENSOGAG00000028592 EVA1B (ENSOGAG00000025550) Haplorrhini ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Simiiformes ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Catarrhini ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Hominoidea ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Hominidae ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Homo/Pan group ANCESTRAL SPECIES 4 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Pan ANCESTRAL SPECIES ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Chimpanzee MODERN SPECIES CSMD2 (ENSPTRG00000000507) C1H1orf94 (ENSPTRG00000000512) GJB5 (ENSPTRG00000023267) GJB4 (ENSPTRG00000022950) ENSPTRG00000000513 SMIM12 (ENSPTRG00000052685) DLGAP3 (ENSPTRG00000000514) ENSPTRG00000050496 TMEM35B (ENSPTRG00000040553) ZMYM6 (ENSPTRG00000000515) ZMYM1 (ENSPTRG00000000516) SFPQ (ENSPTRG00000000518) ZMYM4 (ENSPTRG00000000519) KIAA0319L (ENSPTRG00000000521) NCDN (ENSPTRG00000000522) TFAP2E (ENSPTRG00000000523) ##21 PSMB2 (ENSPTRG00000000524) C1H1orf216 (ENSPTRG00000052130) CLSPN (ENSPTRG00000000526) AGO4 (ENSPTRG00000000527) AGO1 (ENSPTRG00000000528) AGO3 (ENSPTRG00000000529) TEKT2 (ENSPTRG00000024371) ADPRS (ENSPTRG00000000531) COL8A2 (ENSPTRG00000000532) TRAPPC3 (ENSPTRG00000000533) MAP7D1 (ENSPTRG00000000534) THRAP3 (ENSPTRG00000000535) SH3D21 (ENSPTRG00000034515) EVA1B (ENSPTRG00000000537) STK40 (ENSPTRG00000000538) Bonobo MODERN SPECIES C1orf94 (ENSPPAG00000040160) GJB5 (ENSPPAG00000019245) GJB4 (ENSPPAG00000012554) ENSPPAG00000008621 SMIM12 (ENSPPAG00000005985) DLGAP3 (ENSPPAG00000039097) ENSPPAG00000043640 TMEM35B (ENSPPAG00000012633) ZMYM6 (ENSPPAG00000032166) ZMYM1 (ENSPPAG00000038162) SFPQ (ENSPPAG00000030078) ZMYM4 (ENSPPAG00000031498) ENSPPAG00000043691 KIAA0319L (ENSPPAG00000033357) NCDN (ENSPPAG00000040334) TFAP2E (ENSPPAG00000039587) ##21 PSMB2 (ENSPPAG00000043554) C1orf216 (ENSPPAG00000004841) CLSPN (ENSPPAG00000029163) AGO4 (ENSPPAG00000031752) AGO1 (ENSPPAG00000034838) AGO3 (ENSPPAG00000031959) TEKT2 (ENSPPAG00000032256) ADPRS (ENSPPAG00000041931) COL8A2 (ENSPPAG00000031750) TRAPPC3 (ENSPPAG00000041117) MAP7D1 (ENSPPAG00000039211) THRAP3 (ENSPPAG00000028961) SH3D21 (ENSPPAG00000028393) EVA1B (ENSPPAG00000028458) STK40 (ENSPPAG00000038002) Human MODERN SPECIES C1orf94 (ENSG00000142698) SMIM12 (ENSG00000163866) GJB5 (ENSG00000189280) GJB4 (ENSG00000189433) GJB3 (ENSG00000188910) GJA4 (ENSG00000187513) DLGAP3 (ENSG00000116544) ENSG00000284773 TMEM35B (ENSG00000243749) ZMYM6 (ENSG00000163867) ZMYM1 (ENSG00000197056) SFPQ (ENSG00000116560) ZMYM4 (ENSG00000146463) KIAA0319L (ENSG00000142687) NCDN (ENSG00000020129) TFAP2E (ENSG00000116819) ##21 PSMB2 (ENSG00000126067) C1orf216 (ENSG00000142686) CLSPN (ENSG00000092853) AGO4 (ENSG00000134698) AGO1 (ENSG00000092847) AGO3 (ENSG00000126070) TEKT2 (ENSG00000092850) ADPRS (ENSG00000116863) COL8A2 (ENSG00000171812) TRAPPC3 (ENSG00000054116) MAP7D1 (ENSG00000116871) THRAP3 (ENSG00000054118) SH3D21 (ENSG00000214193) EVA1B (ENSG00000142694) STK40 (ENSG00000196182) Gorilla MODERN SPECIES C1orf94 (ENSGGOG00000002112) GJB5 (ENSGGOG00000008954) GJB4 (ENSGGOG00000008958) ENSGGOG00000040481 SMIM12 (ENSGGOG00000043837) DLGAP3 (ENSGGOG00000013343) ENSGGOG00000043198 TMEM35B (ENSGGOG00000026101) ZMYM6 (ENSGGOG00000009644) ZMYM1 (ENSGGOG00000028505) SFPQ (ENSGGOG00000026354) ZMYM4 (ENSGGOG00000012150) ENSGGOG00000023775 KIAA0319L (ENSGGOG00000012068) NCDN (ENSGGOG00000009754) TFAP2E (ENSGGOG00000009762) ##21 PSMB2 (ENSGGOG00000009771) C1orf216 (ENSGGOG00000043887) CLSPN (ENSGGOG00000005981) AGO4 (ENSGGOG00000036532) AGO1 (ENSGGOG00000003316) AGO3 (ENSGGOG00000036711) ENSGGOG00000043836 TEKT2 (ENSGGOG00000003766) ADPRS (ENSGGOG00000003770) COL8A2 (ENSGGOG00000003772) TRAPPC3 (ENSGGOG00000004752) MAP7D1 (ENSGGOG00000003219) THRAP3 (ENSGGOG00000006917) SH3D21 (ENSGGOG00000006931) EVA1B (ENSGGOG00000006937) Orangutan MODERN SPECIES C1orf94 (ENSPPYG00000001569) GJB5 (ENSPPYG00000001568) GJB4 (ENSPPYG00000001567) GJB3 (ENSPPYG00000001566) GJA4 (ENSPPYG00000001565) ENSPPYG00000040242 DLGAP3 (ENSPPYG00000001564) ENSPPYG00000001563 ZMYM6 (ENSPPYG00000001562) ZMYM1 (ENSPPYG00000001561) SFPQ (ENSPPYG00000001560) ENSPPYG00000035382 ZMYM4 (ENSPPYG00000001559) KIAA0319L (ENSPPYG00000001558) NCDN (ENSPPYG00000001557) TFAP2E (ENSPPYG00000001556) ##21 PSMB2 (ENSPPYG00000001555) C1orf216 (ENSPPYG00000001554) CLSPN (ENSPPYG00000001553) AGO4 (ENSPPYG00000001552) AGO1 (ENSPPYG00000001551) AGO3 (ENSPPYG00000001550) ENSPPYG00000040273 TEKT2 (ENSPPYG00000001549) ADPRS (ENSPPYG00000001548) COL8A2 (ENSPPYG00000001547) TRAPPC3 (ENSPPYG00000001546) MAP7D1 (ENSPPYG00000001545) THRAP3 (ENSPPYG00000001544) SH3D21 (ENSPPYG00000001543) EVA1B (ENSPPYG00000030005) Gibbon MODERN SPECIES 2 GJB5 (ENSNLEG00000003498) GJB4 (ENSNLEG00000018199) ENSNLEG00000018200 SMIM12 (ENSNLEG00000018201) DLGAP3 (ENSNLEG00000003515) ENSNLEG00000003521 TMEM35B (ENSNLEG00000003522) ZMYM6 (ENSNLEG00000003530) ZMYM1 (ENSNLEG00000003575) ENSNLEG00000035521 ZMYM4 (ENSNLEG00000010891) ENSNLEG00000018998 ENSNLEG00000031618 KIAA0319L (ENSNLEG00000011001) NCDN (ENSNLEG00000011043) TFAP2E (ENSNLEG00000011088) ##21 PSMB2 (ENSNLEG00000034792) C1orf216 (ENSNLEG00000035826) CLSPN (ENSNLEG00000011110) AGO4 (ENSNLEG00000011125) AGO1 (ENSNLEG00000011181) AGO3 (ENSNLEG00000027092) TEKT2 (ENSNLEG00000011235) ADPRS (ENSNLEG00000011265) ENSNLEG00000011300 TRAPPC3 (ENSNLEG00000031818) ENSNLEG00000011317 THRAP3 (ENSNLEG00000011359) SH3D21 (ENSNLEG00000011391) EVA1B (ENSNLEG00000030121) STK40 (ENSNLEG00000011406) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Rhinopithecus ANCESTRAL SPECIES 37 ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000154172.gb.a ENSGT00950000182960.a.a.a.a.b.rb.v ENSGT00390000015109 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Black snub-nosed monkey MODERN SPECIES 766 HMGB4 (ENSRBIG00000016201) C1orf94 (ENSRBIG00000037497) GJB5 (ENSRBIG00000026064) ENSRBIG00000035224 SMIM12 (ENSRBIG00000027493) DLGAP3 (ENSRBIG00000029580) ENSRBIG00000023057 TMEM35B (ENSRBIG00000033735) ZMYM6 (ENSRBIG00000034768) ZMYM1 (ENSRBIG00000035271) SFPQ (ENSRBIG00000035286) ZMYM4 (ENSRBIG00000036089) KIAA0319L (ENSRBIG00000040947) ENSRBIG00000041273 NCDN (ENSRBIG00000023812) TFAP2E (ENSRBIG00000038962) ##21 PSMB2 (ENSRBIG00000034620) C1orf216 (ENSRBIG00000010891) CLSPN (ENSRBIG00000030748) AGO4 (ENSRBIG00000040185) AGO1 (ENSRBIG00000032611) AGO3 (ENSRBIG00000043774) ENSRBIG00000006280 TEKT2 (ENSRBIG00000044673) ADPRS (ENSRBIG00000004132) COL8A2 (ENSRBIG00000043182) TRAPPC3 (ENSRBIG00000043692) MAP7D1 (ENSRBIG00000032601) THRAP3 (ENSRBIG00000031284) SH3D21 (ENSRBIG00000031442) EVA1B (ENSRBIG00000035344) Golden snub-nosed monkey MODERN SPECIES 880 ZMYM4 (ENSRROG00000042249) KIAA0319L (ENSRROG00000033805) ENSRROG00000033752 NCDN (ENSRROG00000042808) TFAP2E (ENSRROG00000042239) ##21 PSMB2 (ENSRROG00000029102) C1orf216 (ENSRROG00000023698) CLSPN (ENSRROG00000030857) AGO4 (ENSRROG00000035783) AGO1 (ENSRROG00000044469) AGO3 (ENSRROG00000042180) ENSRROG00000027570 TEKT2 (ENSRROG00000039414) ADPRS (ENSRROG00000030199) COL8A2 (ENSRROG00000030627) TRAPPC3 (ENSRROG00000034420) MAP7D1 (ENSRROG00000045698) THRAP3 (ENSRROG00000028592) SH3D21 (ENSRROG00000042801) EVA1B (ENSRROG00000034651) Cercopithecinae ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Vervet Monkey MODERN SPECIES 12 CSMD2 (ENSCSAG00000001075) C1orf94 (ENSCSAG00000001076) GJB5 (ENSCSAG00000000657) GJB4 (ENSCSAG00000000658) GJB3 (ENSCSAG00000000659) GJA4 (ENSCSAG00000000660) SMIM12 (ENSCSAG00000001077) DLGAP3 (ENSCSAG00000001078) ENSCSAG00000001079 TMEM35B (ENSCSAG00000001080) ZMYM1 (ENSCSAG00000001081) SFPQ (ENSCSAG00000001082) ZMYM4 (ENSCSAG00000001083) KIAA0319L (ENSCSAG00000001084) NCDN (ENSCSAG00000001085) TFAP2E (ENSCSAG00000001086) ##21 PSMB2 (ENSCSAG00000001087) C1orf216 (ENSCSAG00000000132) ENSCSAG00000001088 ENSCSAG00000001089 AGO4 (ENSCSAG00000001090) AGO1 (ENSCSAG00000001091) AGO3 (ENSCSAG00000001092) ENSCSAG00000000133 TEKT2 (ENSCSAG00000001093) ADPRS (ENSCSAG00000001094) COL8A2 (ENSCSAG00000001095) TRAPPC3 (ENSCSAG00000001096) MAP7D1 (ENSCSAG00000001097) THRAP3 (ENSCSAG00000001098) SH3D21 (ENSCSAG00000001100) Cercopithecinae_a ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Macaca ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Pig-tailed macaque MODERN SPECIES 217 GJB5 (ENSMNEG00000005315) GJB4 (ENSMNEG00000006153) ENSMNEG00000010043 SMIM12 (ENSMNEG00000015964) ENSMNEG00000006704 DLGAP3 (ENSMNEG00000007661) ENSMNEG00000033692 TMEM35B (ENSMNEG00000032062) ZMYM6 (ENSMNEG00000040593) ZMYM1 (ENSMNEG00000011672) SFPQ (ENSMNEG00000038895) ZMYM4 (ENSMNEG00000028361) KIAA0319L (ENSMNEG00000034746) ENSMNEG00000042114 NCDN (ENSMNEG00000036209) TFAP2E (ENSMNEG00000026563) ##21 PSMB2 (ENSMNEG00000042680) C1orf216 (ENSMNEG00000011640) CLSPN (ENSMNEG00000031665) AGO4 (ENSMNEG00000037723) AGO1 (ENSMNEG00000028881) AGO3 (ENSMNEG00000039518) ENSMNEG00000022567 TEKT2 (ENSMNEG00000034182) ADPRS (ENSMNEG00000038272) COL8A2 (ENSMNEG00000043231) TRAPPC3 (ENSMNEG00000014589) MAP7D1 (ENSMNEG00000035413) THRAP3 (ENSMNEG00000018987) SH3D21 (ENSMNEG00000043158) EVA1B (ENSMNEG00000041849) Macaca_a ANCESTRAL SPECIES ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.c.b ENSGT00940000158729.c.a ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Crab-eating macaque MODERN SPECIES ENSMFAG00000063389 ZNF362 (ENSMFAG00000045133) PHC2 (ENSMFAG00000035555) ZSCAN20 (ENSMFAG00000042799) HMGB4 (ENSMFAG00000009241) CSMD2 (ENSMFAG00000043403) C1orf94 (ENSMFAG00000000568) GJB5 (ENSMFAG00000004700) GJB4 (ENSMFAG00000004579) GJB3 (ENSMFAG00000033734) GJA4 (ENSMFAG00000041783) ENSMFAG00000051818 DLGAP3 (ENSMFAG00000038442) ZMYM4 (ENSMFAG00000032709) KIAA0319L (ENSMFAG00000003546) TFAP2E (ENSMFAG00000036191) ##21 NCDN (ENSMFAG00000038902) PSMB2 (ENSMFAG00000002319) C1orf216 (ENSMFAG00000005466) CLSPN (ENSMFAG00000021652) ENSMFAG00000050764 ENSMFAG00000035543 ENSMFAG00000055085 AGO1 (ENSMFAG00000002846) ENSMFAG00000004521 TEKT2 (ENSMFAG00000003542) ADPRS (ENSMFAG00000034318) COL8A2 (ENSMFAG00000048490) TRAPPC3 (ENSMFAG00000038169) THRAP3 (ENSMFAG00000040144) SH3D21 (ENSMFAG00000036528) Rhesus MODERN SPECIES CSMD2 (ENSMMUG00000002741) C1H1orf94 (ENSMMUG00000000952) GJB5 (ENSMMUG00000001859) GJB4 (ENSMMUG00000001860) GJB3 (ENSMMUG00000022677) GJA4 (ENSMMUG00000022679) ENSMMUG00000012505 DLGAP3 (ENSMMUG00000004998) TMEM35B (ENSMMUG00000042531) ZMYM6 (ENSMMUG00000005000) ZMYM1 (ENSMMUG00000016479) SFPQ (ENSMMUG00000019154) ZMYM4 (ENSMMUG00000019793) KIAA0319L (ENSMMUG00000019806) NCDN (ENSMMUG00000019812) TFAP2E (ENSMMUG00000019815) ##21 PSMB2 (ENSMMUG00000013090) C1H1orf216 (ENSMMUG00000059270) CLSPN (ENSMMUG00000010961) ENSMMUG00000053265 ENSMMUG00000050423 AGO4 (ENSMMUG00000003343) AGO1 (ENSMMUG00000006251) AGO3 (ENSMMUG00000006252) TEKT2 (ENSMMUG00000012028) ADPRS (ENSMMUG00000050632) COL8A2 (ENSMMUG00000012031) TRAPPC3 (ENSMMUG00000022499) MAP7D1 (ENSMMUG00000022500) THRAP3 (ENSMMUG00000014622) SH3D21 (ENSMMUG00000011688) Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.d ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000156221.c.b ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Cercopithecinae_d ANCESTRAL SPECIES 1 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00390000002480 ENSGT00390000009435 ENSGT00910000147888 ENSGT00940000159513 ENSGT00650000093733 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.d ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Sooty mangabey MODERN SPECIES 227 GJB4 (ENSCATG00000004245) GJB3 (ENSCATG00000006471) ENSCATG00000006495 SMIM12 (ENSCATG00000004268) DLGAP3 (ENSCATG00000021045) ENSCATG00000043216 TMEM35B (ENSCATG00000022162) ZMYM6 (ENSCATG00000033137) ZMYM1 (ENSCATG00000043393) ENSCATG00000032664 ENSCATG00000043711 ZMYM4 (ENSCATG00000034945) ENSCATG00000042306 KIAA0319L (ENSCATG00000043672) NCDN (ENSCATG00000043234) TFAP2E (ENSCATG00000032602) ##21 PSMB2 (ENSCATG00000038881) C1orf216 (ENSCATG00000006919) CLSPN (ENSCATG00000044080) AGO4 (ENSCATG00000043421) AGO1 (ENSCATG00000031521) AGO3 (ENSCATG00000029748) ENSCATG00000005617 TEKT2 (ENSCATG00000042764) ADPRS (ENSCATG00000042745) COL8A2 (ENSCATG00000032341) TRAPPC3 (ENSCATG00000041647) MAP7D1 (ENSCATG00000038724) THRAP3 (ENSCATG00000038343) SH3D21 (ENSCATG00000044150) EVA1B (ENSCATG00000039327) Drill MODERN SPECIES 1182 GJB5 (ENSMLEG00000027533) GJB4 (ENSMLEG00000018745) ENSMLEG00000009138 SMIM12 (ENSMLEG00000028333) ENSMLEG00000001304 DLGAP3 (ENSMLEG00000036514) ENSMLEG00000033529 TMEM35B (ENSMLEG00000000079) ZMYM6 (ENSMLEG00000041873) ZMYM1 (ENSMLEG00000040094) ENSMLEG00000010643 ZMYM4 (ENSMLEG00000043391) ENSMLEG00000009523 KIAA0319L (ENSMLEG00000028497) NCDN (ENSMLEG00000032151) TFAP2E (ENSMLEG00000041305) ##21 PSMB2 (ENSMLEG00000041248) C1orf216 (ENSMLEG00000024398) CLSPN (ENSMLEG00000028042) Olive baboon MODERN SPECIES C1orf94 (ENSPANG00000019095) GJB5 (ENSPANG00000005592) GJB4 (ENSPANG00000032681) GJB3 (ENSPANG00000021575) GJA4 (ENSPANG00000005195) SMIM12 (ENSPANG00000017989) DLGAP3 (ENSPANG00000018879) ENSPANG00000030367 TMEM35B (ENSPANG00000019714) ZMYM6 (ENSPANG00000007234) ZMYM1 (ENSPANG00000020898) ENSPANG00000005380 ZMYM4 (ENSPANG00000011410) KIAA0319L (ENSPANG00000010535) NCDN (ENSPANG00000017888) TFAP2E (ENSPANG00000004801) ##21 PSMB2 (ENSPANG00000007342) ENSPANG00000047679 C1orf216 (ENSPANG00000023261) CLSPN (ENSPANG00000023877) AGO4 (ENSPANG00000007232) AGO1 (ENSPANG00000009060) AGO3 (ENSPANG00000007682) ENSPANG00000032150 TEKT2 (ENSPANG00000010534) ADPRS (ENSPANG00000010533) COL8A2 (ENSPANG00000011822) TRAPPC3 (ENSPANG00000013869) MAP7D1 (ENSPANG00000006397) THRAP3 (ENSPANG00000010532) SH3D21 (ENSPANG00000019295) Platyrrhini ANCESTRAL SPECIES ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Cebidae ANCESTRAL SPECIES 1 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Cebidae_a ANCESTRAL SPECIES ENSGT00940000159768 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00390000002480 ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Bolivian squirrel monkey MODERN SPECIES 135 ZSCAN20 (ENSSBOG00000009094) HMGB4 (ENSSBOG00000020083) CSMD2 (ENSSBOG00000007311) C1orf94 (ENSSBOG00000024989) GJB4 (ENSSBOG00000019043) SMIM12 (ENSSBOG00000017532) DLGAP3 (ENSSBOG00000010360) ENSSBOG00000032205 ZMYM6 (ENSSBOG00000001654) ENSSBOG00000031975 ZMYM1 (ENSSBOG00000024618) ENSSBOG00000024972 ZMYM4 (ENSSBOG00000033026) KIAA0319L (ENSSBOG00000030468) NCDN (ENSSBOG00000036150) TFAP2E (ENSSBOG00000035566) ##21 ENSSBOG00000035339 CLSPN (ENSSBOG00000034344) AGO4 (ENSSBOG00000026529) AGO1 (ENSSBOG00000020867) AGO3 (ENSSBOG00000029981) TEKT2 (ENSSBOG00000022674) ADPRS (ENSSBOG00000028837) COL8A2 (ENSSBOG00000027384) TRAPPC3 (ENSSBOG00000033429) MAP7D1 (ENSSBOG00000032444) THRAP3 (ENSSBOG00000029130) SH3D21 (ENSSBOG00000032808) EVA1B (ENSSBOG00000023166) STK40 (ENSSBOG00000030732) ENSSBOG00000036413 Capuchin MODERN SPECIES 277 ENSCCAG00000029361 ZMYM4 (ENSCCAG00000037293) KIAA0319L (ENSCCAG00000034416) NCDN (ENSCCAG00000035361) TFAP2E (ENSCCAG00000014473) ##21 ENSCCAG00000025604 ENSCCAG00000020290 C1orf216 (ENSCCAG00000032404) ENSCCAG00000032336 CLSPN (ENSCCAG00000020740) ENSCCAG00000007055 AGO4 (ENSCCAG00000001397) AGO1 (ENSCCAG00000011823) AGO3 (ENSCCAG00000034189) TEKT2 (ENSCCAG00000034337) ADPRS (ENSCCAG00000029534) COL8A2 (ENSCCAG00000034498) TRAPPC3 (ENSCCAG00000016538) MAP7D1 (ENSCCAG00000023770) THRAP3 (ENSCCAG00000028401) Marmoset MODERN SPECIES 19 C1orf94 (ENSCJAG00000001370) GJB5 (ENSCJAG00000001379) GJB4 (ENSCJAG00000023374) GJB3 (ENSCJAG00000001380) GJA4 (ENSCJAG00000001383) DLGAP3 (ENSCJAG00000001385) ENSCJAG00000001402 TMEM35B (ENSCJAG00000080573) ZMYM6 (ENSCJAG00000001408) ZMYM1 (ENSCJAG00000001420) ENSCJAG00000087298 SFPQ (ENSCJAG00000001431) ZMYM4 (ENSCJAG00000001447) KIAA0319L (ENSCJAG00000001486) NCDN (ENSCJAG00000001525) TFAP2E (ENSCJAG00000001531) ##21 PSMB2 (ENSCJAG00000038344) C1orf216 (ENSCJAG00000044395) CLSPN (ENSCJAG00000001559) AGO4 (ENSCJAG00000001610) AGO1 (ENSCJAG00000032023) AGO3 (ENSCJAG00000031580) TEKT2 (ENSCJAG00000001705) ADPRS (ENSCJAG00000001719) COL8A2 (ENSCJAG00000046041) TRAPPC3 (ENSCJAG00000001734) MAP7D1 (ENSCJAG00000001746) THRAP3 (ENSCJAG00000001754) SH3D21 (ENSCJAG00000001796) EVA1B (ENSCJAG00000001807) STK40 (ENSCJAG00000001818) Mas night monkey MODERN SPECIES 957 GJB5 (ENSANAG00000019093) GJB4 (ENSANAG00000019799) ENSANAG00000021104 SMIM12 (ENSANAG00000006942) DLGAP3 (ENSANAG00000022630) TMEM35B (ENSANAG00000034599) ZMYM6 (ENSANAG00000028623) ENSANAG00000036547 ZMYM1 (ENSANAG00000035625) ENSANAG00000033824 ENSANAG00000021268 ZMYM4 (ENSANAG00000032379) ENSANAG00000027043 KIAA0319L (ENSANAG00000030578) NCDN (ENSANAG00000030003) TFAP2E (ENSANAG00000033962) ##21 PSMB2 (ENSANAG00000034782) C1orf216 (ENSANAG00000017316) CLSPN (ENSANAG00000037355) AGO4 (ENSANAG00000031428) AGO1 (ENSANAG00000037711) AGO3 (ENSANAG00000037735) TEKT2 (ENSANAG00000027050) ADPRS (ENSANAG00000027244) COL8A2 (ENSANAG00000030537) TRAPPC3 (ENSANAG00000029327) MAP7D1 (ENSANAG00000015395) ENSANAG00000032677 ENSANAG00000024479 SH3D21 (ENSANAG00000028854) EVA1B (ENSANAG00000029581) Tarsier MODERN SPECIES 6380 ENSTSYG00000026091 ZMYM4 (ENSTSYG00000004468) KIAA0319L (ENSTSYG00000003416) NCDN (ENSTSYG00000027740) TFAP2E (ENSTSYG00000028710) ##21 PSMB2 (ENSTSYG00000005648) CLSPN (ENSTSYG00000009812) AGO4 (ENSTSYG00000014007) AGO1 (ENSTSYG00000009767) AGO3 (ENSTSYG00000011897) Euarchontoglires_A ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Glires ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Lagomorpha ANCESTRAL SPECIES 36 ENSGT00940000159768.d ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000168963 Pika MODERN SPECIES 139 NCDN (ENSOPRG00000012227) TFAP2E (ENSOPRG00000012238) ##21 PSMB2 (ENSOPRG00000012259) CLSPN (ENSOPRG00000012276) AGO4 (ENSOPRG00000012309) AGO1 (ENSOPRG00000012325) AGO3 (ENSOPRG00000012344) Rabbit MODERN SPECIES 437 CSMD2 (ENSOCUG00000007194) C1orf94 (ENSOCUG00000007215) ENSOCUG00000007467 GJB4 (ENSOCUG00000033109) GJB3 (ENSOCUG00000004926) GJA4 (ENSOCUG00000000325) DLGAP3 (ENSOCUG00000012229) ENSOCUG00000024160 TMEM35B (ENSOCUG00000029466) ZMYM6 (ENSOCUG00000016602) ZMYM1 (ENSOCUG00000008350) SFPQ (ENSOCUG00000001877) ZMYM4 (ENSOCUG00000013149) KIAA0319L (ENSOCUG00000013172) NCDN (ENSOCUG00000013183) TFAP2E (ENSOCUG00000013190) ##21 PSMB2 (ENSOCUG00000013198) C1orf216 (ENSOCUG00000009123) CLSPN (ENSOCUG00000017387) AGO4 (ENSOCUG00000004076) ENSOCUG00000008679 AGO1 (ENSOCUG00000023116) AGO3 (ENSOCUG00000006255) ENSOCUG00000035817 ENSOCUG00000027798 TEKT2 (ENSOCUG00000029722) ADPRS (ENSOCUG00000011038) COL8A2 (ENSOCUG00000011042) TRAPPC3 (ENSOCUG00000011044) MAP7D1 (ENSOCUG00000001551) THRAP3 (ENSOCUG00000005323) Rodentia ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Rodentia_A ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Sciuridae ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Marmotini ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.i ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Marmotini_b ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.b ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221.i ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Arctic ground squirrel MODERN SPECIES 120 GJB5 (ENSUPAG00010000971) ENSUPAG00010000965 GJB4 (ENSUPAG00010000956) GJB3 (ENSUPAG00010000953) ENSUPAG00010000945 GJA4 (ENSUPAG00010000941) SMIM12 (ENSUPAG00010000936) DLGAP3 (ENSUPAG00010000906) TMEM35B (ENSUPAG00010000897) ZMYM6 (ENSUPAG00010000770) ZMYM1 (ENSUPAG00010000724) ENSUPAG00010000666 ZMYM4 (ENSUPAG00010000592) KIAA0319L (ENSUPAG00010000550) NCDN (ENSUPAG00010000503) TFAP2E (ENSUPAG00010000482) ##21 PSMB2 (ENSUPAG00010000458) C1orf216 (ENSUPAG00010000447) CLSPN (ENSUPAG00010000278) AGO4 (ENSUPAG00010000240) AGO1 (ENSUPAG00010000213) AGO3 (ENSUPAG00010000133) TEKT2 (ENSUPAG00010000079) ADPRS (ENSUPAG00010000029) COL8A2 (ENSUPAG00010017659) TRAPPC3 (ENSUPAG00010017653) MAP7D1 (ENSUPAG00010017568) THRAP3 (ENSUPAG00010017531) SH3D21 (ENSUPAG00010017516) EVA1B (ENSUPAG00010017508) STK40 (ENSUPAG00010017491) Squirrel MODERN SPECIES 74 C1orf94 (ENSSTOG00000021960) GJB5 (ENSSTOG00000022062) GJB4 (ENSSTOG00000020787) GJB3 (ENSSTOG00000007634) GJA4 (ENSSTOG00000007636) SMIM12 (ENSSTOG00000027101) DLGAP3 (ENSSTOG00000007641) TMEM35B (ENSSTOG00000020434) ZMYM6 (ENSSTOG00000007662) ZMYM1 (ENSSTOG00000002239) ENSSTOG00000014004 ZMYM4 (ENSSTOG00000001750) KIAA0319L (ENSSTOG00000001767) ENSSTOG00000022215 NCDN (ENSSTOG00000025477) TFAP2E (ENSSTOG00000001781) ##21 PSMB2 (ENSSTOG00000001795) ENSSTOG00000025789 C1orf216 (ENSSTOG00000000870) CLSPN (ENSSTOG00000021294) AGO4 (ENSSTOG00000004725) AGO1 (ENSSTOG00000010857) AGO3 (ENSSTOG00000025904) TEKT2 (ENSSTOG00000010245) ADPRS (ENSSTOG00000010251) COL8A2 (ENSSTOG00000023344) TRAPPC3 (ENSSTOG00000010270) MAP7D1 (ENSSTOG00000010274) THRAP3 (ENSSTOG00000000602) EVA1B (ENSSTOG00000023164) STK40 (ENSSTOG00000027085) Alpin marmot MODERN SPECIES 15 C1orf94 (ENSMMMG00000008230) GJB5 (ENSMMMG00000008213) GJB4 (ENSMMMG00000008204) GJB3 (ENSMMMG00000008202) GJA4 (ENSMMMG00000008199) SMIM12 (ENSMMMG00000008196) DLGAP3 (ENSMMMG00000008167) TMEM35B (ENSMMMG00000008144) ZMYM6 (ENSMMMG00000008076) ZMYM1 (ENSMMMG00000008056) ENSMMMG00000008043 ENSMMMG00000008037 ZMYM4 (ENSMMMG00000007967) KIAA0319L (ENSMMMG00000007937) NCDN (ENSMMMG00000007929) TFAP2E (ENSMMMG00000007915) ##21 PSMB2 (ENSMMMG00000007906) C1orf216 (ENSMMMG00000007900) CLSPN (ENSMMMG00000007847) AGO4 (ENSMMMG00000007806) AGO1 (ENSMMMG00000007780) AGO3 (ENSMMMG00000007745) TEKT2 (ENSMMMG00000007715) ADPRS (ENSMMMG00000007700) COL8A2 (ENSMMMG00000007686) TRAPPC3 (ENSMMMG00000007674) MAP7D1 (ENSMMMG00000006325) THRAP3 (ENSMMMG00000006271) SH3D21 (ENSMMMG00000006222) EVA1B (ENSMMMG00000006211) STK40 (ENSMMMG00000006181) Eurasian red squirrel MODERN SPECIES GJB5 (ENSSVLG00005000992) GJB4 (ENSSVLG00005001002) ENSSVLG00005001013 GJB3 (ENSSVLG00005001023) GJA4 (ENSSVLG00005001036) SMIM12 (ENSSVLG00005001044) ENSSVLG00005001058 DLGAP3 (ENSSVLG00005001074) TMEM35B (ENSSVLG00005001094) ZMYM6 (ENSSVLG00005001113) ZMYM1 (ENSSVLG00005001142) ENSSVLG00005001170 ZMYM4 (ENSSVLG00005001206) KIAA0319L (ENSSVLG00005001304) NCDN (ENSSVLG00005001362) TFAP2E (ENSSVLG00005001387) ##21 PSMB2 (ENSSVLG00005001408) C1orf216 (ENSSVLG00005001422) CLSPN (ENSSVLG00005001487) AGO4 (ENSSVLG00005001696) AGO1 (ENSSVLG00005001765) AGO3 (ENSSVLG00005001834) TEKT2 (ENSSVLG00005001949) ADPRS (ENSSVLG00005001975) COL8A2 (ENSSVLG00005001986) TRAPPC3 (ENSSVLG00005002006) MAP7D1 (ENSSVLG00005002056) THRAP3 (ENSSVLG00005002113) ENSSVLG00005002147 ENSSVLG00005002157 EVA1B (ENSSVLG00005002184) Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Naked mole-rat female MODERN SPECIES 26 GJB5 (ENSHGLG00000044240) GJB3 (ENSHGLG00000048060) GJA4 (ENSHGLG00000012840) ENSHGLG00000020961 ZMYM6NB (ENSHGLG00000012843) ENSHGLG00000013975 ENSHGLG00000020181 ZMYM1 (ENSHGLG00000010282) ENSHGLG00000035405 ENSHGLG00000035255 ENSHGLG00000043811 ENSHGLG00000014478 ENSHGLG00000048349 KIAA0319L (ENSHGLG00000010433) NCDN (ENSHGLG00000012088) TFAP2E (ENSHGLG00000035632) ##21 PSMB2 (ENSHGLG00000039477) C1orf216 (ENSHGLG00000013004) ENSHGLG00000039952 CLSPN (ENSHGLG00000013282) AGO4 (ENSHGLG00000010241) AGO1 (ENSHGLG00000011540) AGO3 (ENSHGLG00000012538) TEKT2 (ENSHGLG00000019203) ADPRS (ENSHGLG00000018720) ENSHGLG00000033231 ENSHGLG00000013854 MAP7D1 (ENSHGLG00000014101) THRAP3 (ENSHGLG00000019374) ENSHGLG00000011928 ENSHGLG00000035766 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Long-tailed chinchilla MODERN SPECIES 159 HMGB4 (ENSCLAG00000011441) C1orf94 (ENSCLAG00000011889) GJB5 (ENSCLAG00000008575) GJB4 (ENSCLAG00000008605) GJB3 (ENSCLAG00000009314) GJA4 (ENSCLAG00000009781) SMIM12 (ENSCLAG00000011991) DLGAP3 (ENSCLAG00000016598) TMEM35B (ENSCLAG00000012300) ZMYM6 (ENSCLAG00000010163) ZMYM1 (ENSCLAG00000010857) ENSCLAG00000009583 ZMYM4 (ENSCLAG00000009236) KIAA0319L (ENSCLAG00000012151) NCDN (ENSCLAG00000008627) TFAP2E (ENSCLAG00000014043) ##21 PSMB2 (ENSCLAG00000011404) C1orf216 (ENSCLAG00000014133) CLSPN (ENSCLAG00000009173) AGO4 (ENSCLAG00000012097) AGO1 (ENSCLAG00000011507) AGO3 (ENSCLAG00000013184) TEKT2 (ENSCLAG00000011534) ADPRS (ENSCLAG00000013083) COL8A2 (ENSCLAG00000007777) TRAPPC3 (ENSCLAG00000007951) MAP7D1 (ENSCLAG00000011145) THRAP3 (ENSCLAG00000013043) ENSCLAG00000014941 EVA1B (ENSCLAG00000012665) STK40 (ENSCLAG00000008274) Degu MODERN SPECIES 171 ENSODEG00000005748 GJB5 (ENSODEG00000019101) GJB4 (ENSODEG00000019166) GJB3 (ENSODEG00000019250) ENSODEG00000019265 DLGAP3 (ENSODEG00000004599) TMEM35B (ENSODEG00000005208) ZMYM6 (ENSODEG00000004986) ENSODEG00000019227 ZMYM1 (ENSODEG00000005852) ENSODEG00000019214 SFPQ (ENSODEG00000005485) ZMYM4 (ENSODEG00000005948) KIAA0319L (ENSODEG00000005820) NCDN (ENSODEG00000006887) TFAP2E (ENSODEG00000004925) ##21 PSMB2 (ENSODEG00000006435) ENSODEG00000019417 CLSPN (ENSODEG00000006133) AGO4 (ENSODEG00000006355) ENSODEG00000007754 AGO1 (ENSODEG00000005321) AGO3 (ENSODEG00000005161) ENSODEG00000019305 ENSODEG00000006322 TEKT2 (ENSODEG00000007150) ADPRS (ENSODEG00000006213) ENSODEG00000006340 ENSODEG00000007410 MAP7D1 (ENSODEG00000005198) ENSODEG00000006090 Guinea pig MODERN SPECIES 25 CSMD2 (ENSCPOG00000007528) C1orf94 (ENSCPOG00000004093) GJB5 (ENSCPOG00000009613) GJB4 (ENSCPOG00000009615) GJB3 (ENSCPOG00000038056) GJA4 (ENSCPOG00000027166) SMIM12 (ENSCPOG00000032974) DLGAP3 (ENSCPOG00000026669) TMEM35B (ENSCPOG00000022136) ZMYM6 (ENSCPOG00000006597) ZMYM1 (ENSCPOG00000035155) ENSCPOG00000015018 ZMYM4 (ENSCPOG00000008336) KIAA0319L (ENSCPOG00000008350) NCDN (ENSCPOG00000023962) TFAP2E (ENSCPOG00000024445) ##21 PSMB2 (ENSCPOG00000036531) C1orf216 (ENSCPOG00000031562) ENSCPOG00000011544 AGO4 (ENSCPOG00000011557) AGO1 (ENSCPOG00000011568) AGO3 (ENSCPOG00000030524) TEKT2 (ENSCPOG00000006152) ADPRS (ENSCPOG00000031369) COL8A2 (ENSCPOG00000039740) TRAPPC3 (ENSCPOG00000038851) MAP7D1 (ENSCPOG00000000559) ENSCPOG00000037255 THRAP3 (ENSCPOG00000015742) EVA1B (ENSCPOG00000020754) STK40 (ENSCPOG00000027226) Rodentia_B ANCESTRAL SPECIES ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Kangaroo rat MODERN SPECIES 499 Dlgap3 (ENSDORG00000016290) Tmem35b (ENSDORG00000023990) Zmym6 (ENSDORG00000026831) Zmym1 (ENSDORG00000024223) Sfpq (ENSDORG00000008109) Zmym4 (ENSDORG00000010296) ENSDORG00000028012 ENSDORG00000029801 Ncdn (ENSDORG00000004799) Tfap2e (ENSDORG00000004800) ##21 Psmb2 (ENSDORG00000027956) 5730409E04Rik (ENSDORG00000027526) Clspn (ENSDORG00000011179) Ago4 (ENSDORG00000008933) Ago1 (ENSDORG00000008494) Ago3 (ENSDORG00000009414) Tekt2 (ENSDORG00000001077) Adprs (ENSDORG00000001078) Col8a2 (ENSDORG00000025675) Trappc3 (ENSDORG00000030245) Thrap3 (ENSDORG00000013216) Eva1b (ENSDORG00000027599) Stk40 (ENSDORG00000008423) Lsm10 (ENSDORG00000007579) Oscp1 (ENSDORG00000007580) Myomorpha ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Muroidea ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Muroidea_A ANCESTRAL SPECIES 3 ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b.e Golden Hamster MODERN SPECIES 709 Csmd2 (ENSMAUG00000014465) CK137956 (ENSMAUG00000018336) Gjb5 (ENSMAUG00000000536) Gjb4 (ENSMAUG00000019720) Gjb3 (ENSMAUG00000015536) Gja4 (ENSMAUG00000005059) Smim12 (ENSMAUG00000011085) Dlgap3 (ENSMAUG00000015862) Tmem35b (ENSMAUG00000006155) Zmym6 (ENSMAUG00000003185) Zmym1 (ENSMAUG00000007875) Sfpq (ENSMAUG00000006402) Zmym4 (ENSMAUG00000012351) AU040320 (ENSMAUG00000021852) Ncdn (ENSMAUG00000019387) Tfap2e (ENSMAUG00000019260) ##21 Psmb2 (ENSMAUG00000021796) Chinese hamster chok1gshd MODERN SPECIES 111 Hmgb4 (ENSCGRG00001012739) CK137956 (ENSCGRG00001013310) Gjb5 (ENSCGRG00001012318) Gjb4 (ENSCGRG00001012552) Gjb3 (ENSCGRG00001000865) Gja4 (ENSCGRG00001012957) Smim12 (ENSCGRG00001012895) Dlgap3 (ENSCGRG00001004924) Tmem35b (ENSCGRG00001000432) Zmym6 (ENSCGRG00001024852) Zmym1 (ENSCGRG00001012990) Sfpq (ENSCGRG00001011698) Zmym4 (ENSCGRG00001024188) AU040320 (ENSCGRG00001012798) Ncdn (ENSCGRG00001016309) Tfap2e (ENSCGRG00001004504) ##21 Psmb2 (ENSCGRG00001009469) ENSCGRG00001003912 5730409E04Rik (ENSCGRG00001001609) Clspn (ENSCGRG00001014483) Ago4 (ENSCGRG00001002701) Ago1 (ENSCGRG00001022708) Ago3 (ENSCGRG00001024614) Tekt2 (ENSCGRG00001021518) Adprs (ENSCGRG00001023363) Col8a2 (ENSCGRG00001019144) ENSCGRG00001020476 Trappc3 (ENSCGRG00001020776) Map7d1 (ENSCGRG00001022850) Thrap3 (ENSCGRG00001003105) Sh3d21 (ENSCGRG00001013521) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Northern American deer mouse MODERN SPECIES 11 Csmd2 (ENSPEMG00000008334) CK137956 (ENSPEMG00000015521) Gjb5 (ENSPEMG00000000117) Gjb4 (ENSPEMG00000007851) Gjb3 (ENSPEMG00000030261) Gja4 (ENSPEMG00000000173) Smim12 (ENSPEMG00000025607) Dlgap3 (ENSPEMG00000013616) ENSPEMG00000016541 Zmym6 (ENSPEMG00000009346) Zmym1 (ENSPEMG00000018434) Sfpq (ENSPEMG00000009794) Zmym4 (ENSPEMG00000022163) AU040320 (ENSPEMG00000004246) Ncdn (ENSPEMG00000013918) Tfap2e (ENSPEMG00000023893) ##21 Psmb2 (ENSPEMG00000001295) 5730409E04Rik (ENSPEMG00000029022) Clspn (ENSPEMG00000024140) ENSPEMG00000022651 Ago1 (ENSPEMG00000023313) Ago3 (ENSPEMG00000024271) Tekt2 (ENSPEMG00000007126) Adprs (ENSPEMG00000015344) Col8a2 (ENSPEMG00000030728) Trappc3 (ENSPEMG00000017774) Map7d1 (ENSPEMG00000018714) Thrap3 (ENSPEMG00000023512) Sh3d21 (ENSPEMG00000022518) Eva1b (ENSPEMG00000017056) Stk40 (ENSPEMG00000010968) Prairie vole MODERN SPECIES 1 Csmd2 (ENSMOCG00000020339) CK137956 (ENSMOCG00000010936) Gjb5 (ENSMOCG00000014509) Gjb4 (ENSMOCG00000009562) Gjb3 (ENSMOCG00000005978) Gja4 (ENSMOCG00000004323) Smim12 (ENSMOCG00000012944) Dlgap3 (ENSMOCG00000017605) Zmym6 (ENSMOCG00000017189) Zmym1 (ENSMOCG00000016213) Sfpq (ENSMOCG00000019075) Zmym4 (ENSMOCG00000000547) ENSMOCG00000003001 ENSMOCG00000010938 Ncdn (ENSMOCG00000002663) Tfap2e (ENSMOCG00000008257) ##21 ENSMOCG00000003664 5730409E04Rik (ENSMOCG00000007468) Clspn (ENSMOCG00000018907) Ago4 (ENSMOCG00000005772) Ago1 (ENSMOCG00000000537) Ago3 (ENSMOCG00000020568) Tekt2 (ENSMOCG00000017440) Adprs (ENSMOCG00000019508) Col8a2 (ENSMOCG00000012957) Trappc3 (ENSMOCG00000013847) Map7d1 (ENSMOCG00000019568) ENSMOCG00000005500 ENSMOCG00000015795 Eva1b (ENSMOCG00000017606) Stk40 (ENSMOCG00000019033) Murinae ANCESTRAL SPECIES 2 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Mus ANCESTRAL SPECIES 3 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Mus_A ANCESTRAL SPECIES 3 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a.f ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Mus_B ANCESTRAL SPECIES 5 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a.f ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Mouse MODERN SPECIES 13 Csmd2 (ENSMUSG00000028804) CK137956 (ENSMUSG00000028813) Gjb5 (ENSMUSG00000042357) Gjb4 (ENSMUSG00000046623) Gjb3 (ENSMUSG00000042367) Gja4 (ENSMUSG00000050234) Smim12 (ENSMUSG00000042380) Dlgap3 (ENSMUSG00000042388) Tmem35b (ENSMUSG00000070737) Zmym6 (ENSMUSG00000042408) Zmym1 (ENSMUSG00000043872) Sfpq (ENSMUSG00000028820) Zmym4 (ENSMUSG00000042446) AU040320 (ENSMUSG00000028830) Ncdn (ENSMUSG00000028833) Tfap2e (ENSMUSG00000042477) ##21 Psmb2 (ENSMUSG00000028837) 5730409E04Rik (ENSMUSG00000073755) Clspn (ENSMUSG00000042489) Ago4 (ENSMUSG00000042500) Ago1 (ENSMUSG00000041530) Ago3 (ENSMUSG00000028842) Tekt2 (ENSMUSG00000028845) Adprs (ENSMUSG00000042558) Col8a2 (ENSMUSG00000056174) Trappc3 (ENSMUSG00000028847) Map7d1 (ENSMUSG00000028849) Thrap3 (ENSMUSG00000043962) Sh3d21 (ENSMUSG00000073758) Eva1b (ENSMUSG00000050212) Stk40 (ENSMUSG00000042608) Mus_C ANCESTRAL SPECIES 2 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00910000144227.s.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a.f ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Steppe mouse MODERN SPECIES 3362 Gjb5 (ENSMSIG00000017252) Gjb4 (ENSMSIG00000017249) ENSMSIG00000017239 Gjb3 (ENSMSIG00000017234) Gja4 (ENSMSIG00000017232) ENSMSIG00000017223 Dlgap3 (ENSMSIG00000017193) ENSMSIG00000017178 Tmem35b (ENSMSIG00000017158) Zmym6 (ENSMSIG00000017070) Zmym1 (ENSMSIG00000017008) Sfpq (ENSMSIG00000016948) Zmym4 (ENSMSIG00000016864) AU040320 (ENSMSIG00000016743) Ncdn (ENSMSIG00000016728) Tfap2e (ENSMSIG00000016711) ##21 Psmb2 (ENSMSIG00000016704) ENSMSIG00000016700 5730409E04Rik (ENSMSIG00000016696) ENSMSIG00000016695 Clspn (ENSMSIG00000016630) Ago4 (ENSMSIG00000016601) Ago1 (ENSMSIG00000016559) Ago3 (ENSMSIG00000016468) Tekt2 (ENSMSIG00000016431) Adprs (ENSMSIG00000016412) Col8a2 (ENSMSIG00000016393) Trappc3 (ENSMSIG00000016379) Map7d1 (ENSMSIG00000016217) Thrap3 (ENSMSIG00000016164) Sh3d21 (ENSMSIG00000016082) spretus MODERN SPECIES 13 CK137956 (MGP_SPRETEiJ_G0027477) Gjb5 (MGP_SPRETEiJ_G0027476) Gjb4 (MGP_SPRETEiJ_G0027475) Gjb3 (MGP_SPRETEiJ_G0027474) Gja4 (MGP_SPRETEiJ_G0027473) Smim12 (MGP_SPRETEiJ_G0027472) Dlgap3 (MGP_SPRETEiJ_G0027471) MGP_SPRETEiJ_G0027470 Tmem35b (MGP_SPRETEiJ_G0027469) Zmym6 (MGP_SPRETEiJ_G0027468) Zmym1 (MGP_SPRETEiJ_G0027467) Sfpq (MGP_SPRETEiJ_G0027466) Zmym4 (MGP_SPRETEiJ_G0027465) AU040320 (MGP_SPRETEiJ_G0027464) Ncdn (MGP_SPRETEiJ_G0027463) Tfap2e (MGP_SPRETEiJ_G0027462) ##21 Psmb2 (MGP_SPRETEiJ_G0027461) 5730409E04Rik (MGP_SPRETEiJ_G0027460) Clspn (MGP_SPRETEiJ_G0027459) Ago4 (MGP_SPRETEiJ_G0027458) Ago1 (MGP_SPRETEiJ_G0027457) Ago3 (MGP_SPRETEiJ_G0027456) Tekt2 (MGP_SPRETEiJ_G0027455) Adprs (MGP_SPRETEiJ_G0027454) Col8a2 (MGP_SPRETEiJ_G0027453) Trappc3 (MGP_SPRETEiJ_G0027452) Map7d1 (MGP_SPRETEiJ_G0027451) Thrap3 (MGP_SPRETEiJ_G0027450) Sh3d21 (MGP_SPRETEiJ_G0027449) Eva1b (MGP_SPRETEiJ_G0027448) Stk40 (MGP_SPRETEiJ_G0027447) Ryukyu mouse MODERN SPECIES 13 Csmd2 (MGP_CAROLIEiJ_G0026498) MGP_CAROLIEiJ_G0026497 Gjb5 (MGP_CAROLIEiJ_G0026496) Gjb4 (MGP_CAROLIEiJ_G0026495) Gjb3 (MGP_CAROLIEiJ_G0026494) Gja4 (MGP_CAROLIEiJ_G0026493) Smim12 (MGP_CAROLIEiJ_G0026492) Dlgap3 (MGP_CAROLIEiJ_G0026491) Tmem35b (MGP_CAROLIEiJ_G0026490) Zmym6 (MGP_CAROLIEiJ_G0026489) Zmym1 (MGP_CAROLIEiJ_G0026488) Sfpq (MGP_CAROLIEiJ_G0026487) Zmym4 (MGP_CAROLIEiJ_G0026486) AU040320 (MGP_CAROLIEiJ_G0026485) Ncdn (MGP_CAROLIEiJ_G0026484) Tfap2e (MGP_CAROLIEiJ_G0026483) ##21 Psmb2 (MGP_CAROLIEiJ_G0026482) 5730409E04Rik (MGP_CAROLIEiJ_G0026481) MGP_CAROLIEiJ_G0026480 Ago4 (MGP_CAROLIEiJ_G0026479) Ago1 (MGP_CAROLIEiJ_G0026478) Ago3 (MGP_CAROLIEiJ_G0026477) Tekt2 (MGP_CAROLIEiJ_G0026476) Adprs (MGP_CAROLIEiJ_G0026475) Col8a2 (MGP_CAROLIEiJ_G0026474) Trappc3 (MGP_CAROLIEiJ_G0026473) Map7d1 (MGP_CAROLIEiJ_G0026472) MGP_CAROLIEiJ_G0026471 Sh3d21 (MGP_CAROLIEiJ_G0026470) Eva1b (MGP_CAROLIEiJ_G0026469) Stk40 (MGP_CAROLIEiJ_G0026468) Shrew mouse MODERN SPECIES 19 Csmd2 (MGP_PahariEiJ_G0028829) CK137956 (MGP_PahariEiJ_G0028828) Gjb5 (MGP_PahariEiJ_G0028827) Gjb4 (MGP_PahariEiJ_G0028826) Gjb3 (MGP_PahariEiJ_G0028825) Gja4 (MGP_PahariEiJ_G0028824) Smim12 (MGP_PahariEiJ_G0028823) Dlgap3 (MGP_PahariEiJ_G0028822) Tmem35b (MGP_PahariEiJ_G0028821) MGP_PahariEiJ_G0028820 Zmym1 (MGP_PahariEiJ_G0028819) Sfpq (MGP_PahariEiJ_G0028818) Zmym4 (MGP_PahariEiJ_G0028817) AU040320 (MGP_PahariEiJ_G0028816) Ncdn (MGP_PahariEiJ_G0028815) Tfap2e (MGP_PahariEiJ_G0028814) ##21 Psmb2 (MGP_PahariEiJ_G0028813) 5730409E04Rik (MGP_PahariEiJ_G0028812) Clspn (MGP_PahariEiJ_G0028811) Ago4 (MGP_PahariEiJ_G0028810) Ago1 (MGP_PahariEiJ_G0028809) Ago3 (MGP_PahariEiJ_G0028808) Tekt2 (MGP_PahariEiJ_G0028807) Adprs (MGP_PahariEiJ_G0028806) Col8a2 (MGP_PahariEiJ_G0028805) Trappc3 (MGP_PahariEiJ_G0028804) Map7d1 (MGP_PahariEiJ_G0028803) MGP_PahariEiJ_G0028802 MGP_PahariEiJ_G0028801 Eva1b (MGP_PahariEiJ_G0028800) Stk40 (MGP_PahariEiJ_G0028799) Rat MODERN SPECIES 15 Gjb3 (ENSRNOG00000014372) ENSRNOG00000067866 Gja4 (ENSRNOG00000014357) Smim12 (ENSRNOG00000014352) Dlgap3 (ENSRNOG00000014302) Tmem35b (ENSRNOG00000028083) Zmym6 (ENSRNOG00000013865) Zmym1 (ENSRNOG00000013855) Sfpq (ENSRNOG00000058461) Rpl37a-ps1 (ENSRNOG00000066117) ENSRNOG00000062954 AABR07049918.1 (ENSRNOG00000029310) Zmym4 (ENSRNOG00000012397) LOC100294508 (ENSRNOG00000012204) Ncdn (ENSRNOG00000011751) Tfap2e (ENSRNOG00000027595) ##21 Psmb2 (ENSRNOG00000011463) RGD1563072 (ENSRNOG00000021609) Clspn (ENSRNOG00000011332) Ago4 (ENSRNOG00000025596) Ago1 (ENSRNOG00000055915) Ago3 (ENSRNOG00000034269) Tekt2 (ENSRNOG00000011033) Adprs (ENSRNOG00000010849) Col8a2 (ENSRNOG00000010841) Trappc3 (ENSRNOG00000010550) Map7d1 (ENSRNOG00000010237) Thrap3 (ENSRNOG00000009977) Sh3d21 (ENSRNOG00000024566) Eva1b (ENSRNOG00000024818) Stk40 (ENSRNOG00000025679) Upper Galilee mountains blind mole rat MODERN SPECIES 775 Sfpq (ENSNGAG00000000888) ENSNGAG00000001380 Zmym4 (ENSNGAG00000004986) ENSNGAG00000013255 ENSNGAG00000019339 Ncdn (ENSNGAG00000016923) Tfap2e (ENSNGAG00000020679) ##21 Psmb2 (ENSNGAG00000002741) 5730409E04Rik (ENSNGAG00000004304) Clspn (ENSNGAG00000017502) Ago4 (ENSNGAG00000020544) Ago1 (ENSNGAG00000017448) Ago3 (ENSNGAG00000012607) Tekt2 (ENSNGAG00000015353) Adprs (ENSNGAG00000015743) Col8a2 (ENSNGAG00000017271) Trappc3 (ENSNGAG00000017785) Map7d1 (ENSNGAG00000019773) Thrap3 (ENSNGAG00000010876) Sh3d21 (ENSNGAG00000013731) Eva1b (ENSNGAG00000021220) Stk40 (ENSNGAG00000021449) Lesser Egyptian jerboa MODERN SPECIES 117 Zscan20 (ENSJJAG00000014695) Csmd2 (ENSJJAG00000018133) CK137956 (ENSJJAG00000012762) Gjb5 (ENSJJAG00000009916) Gjb4 (ENSJJAG00000009451) Gjb3 (ENSJJAG00000010162) Gja4 (ENSJJAG00000008333) Dlgap3 (ENSJJAG00000019376) Tmem35b (ENSJJAG00000011512) Zmym6 (ENSJJAG00000024131) Zmym1 (ENSJJAG00000024010) Sfpq (ENSJJAG00000015633) Zmym4 (ENSJJAG00000011913) AU040320 (ENSJJAG00000023709) Ncdn (ENSJJAG00000012057) Tfap2e (ENSJJAG00000023486) ##21 ENSJJAG00000015159 5730409E04Rik (ENSJJAG00000009869) Clspn (ENSJJAG00000023223) ENSJJAG00000003401 Ago1 (ENSJJAG00000019449) Ago3 (ENSJJAG00000017436) Tekt2 (ENSJJAG00000012392) Adprs (ENSJJAG00000001557) Col8a2 (ENSJJAG00000010113) Trappc3 (ENSJJAG00000021017) Map7d1 (ENSJJAG00000018805) ENSJJAG00000024064 ENSJJAG00000013087 Eva1b (ENSJJAG00000000205) Stk40 (ENSJJAG00000013773) Atlantogenata ANCESTRAL SPECIES 4 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Afrotheria ANCESTRAL SPECIES 15 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Tenrec MODERN SPECIES 2424 TFAP2E (ENSETEG00000019509) ##21 ENSETEG00000019511 Afrotheria_a ANCESTRAL SPECIES 15 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Hyrax MODERN SPECIES 3159 KIAA0319L (ENSPCAG00000004952) NCDN (ENSPCAG00000005090) TFAP2E (ENSPCAG00000005174) ##21 PSMB2 (ENSPCAG00000005210) Elephant MODERN SPECIES 332 C1orf94 (ENSLAFG00000014181) GJB5 (ENSLAFG00000028676) GJB4 (ENSLAFG00000002063) GJB3 (ENSLAFG00000007989) GJA4 (ENSLAFG00000013106) SMIM12 (ENSLAFG00000032562) DLGAP3 (ENSLAFG00000013115) ENSLAFG00000001847 TMEM35B (ENSLAFG00000026740) ZMYM6 (ENSLAFG00000001769) ZMYM1 (ENSLAFG00000017786) SFPQ (ENSLAFG00000015951) ZMYM4 (ENSLAFG00000007332) KIAA0319L (ENSLAFG00000007339) NCDN (ENSLAFG00000007345) TFAP2E (ENSLAFG00000029444) ##21 PSMB2 (ENSLAFG00000007353) C1orf216 (ENSLAFG00000027891) CLSPN (ENSLAFG00000007905) AGO4 (ENSLAFG00000010394) AGO1 (ENSLAFG00000010835) AGO3 (ENSLAFG00000002744) TEKT2 (ENSLAFG00000017273) ADPRS (ENSLAFG00000017280) ENSLAFG00000030120 TRAPPC3 (ENSLAFG00000009853) MAP7D1 (ENSLAFG00000009850) THRAP3 (ENSLAFG00000009587) ENSLAFG00000028055 ENSLAFG00000000070 EVA1B (ENSLAFG00000008194) Xenarthra ANCESTRAL SPECIES 36 ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000162386 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Armadillo MODERN SPECIES 2908 SMIM12 (ENSDNOG00000037316) DLGAP3 (ENSDNOG00000019762) TMEM35B (ENSDNOG00000033347) ZMYM6 (ENSDNOG00000004515) ZMYM1 (ENSDNOG00000036109) SFPQ (ENSDNOG00000049454) ENSDNOG00000032775 ZMYM4 (ENSDNOG00000017647) KIAA0319L (ENSDNOG00000017653) NCDN (ENSDNOG00000017658) TFAP2E (ENSDNOG00000036871) ##21 PSMB2 (ENSDNOG00000017663) C1orf216 (ENSDNOG00000017576) CLSPN (ENSDNOG00000015628) AGO4 (ENSDNOG00000015674) AGO1 (ENSDNOG00000008077) AGO3 (ENSDNOG00000008106) TEKT2 (ENSDNOG00000040733) ADPRS (ENSDNOG00000025495) COL8A2 (ENSDNOG00000043920) TRAPPC3 (ENSDNOG00000039424) MAP7D1 (ENSDNOG00000005516) THRAP3 (ENSDNOG00000031470) SH3D21 (ENSDNOG00000023808) EVA1B (ENSDNOG00000010513) ENSDNOG00000023624 Sloth MODERN SPECIES 1574 ENSCHOG00000004500 ##21 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000159768 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000159768 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Diprotodontia ANCESTRAL SPECIES 3 ENSGT00940000159768 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT00940000159768 ENSGT00940000162735 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 koala MODERN SPECIES 14 ENSPCIG00000017223 GJB5 (ENSPCIG00000001113) GJB4 (ENSPCIG00000001047) ENSPCIG00000001036 GJB3 (ENSPCIG00000000987) GJA4 (ENSPCIG00000000982) ENSPCIG00000000976 DLGAP3 (ENSPCIG00000000961) ENSPCIG00000000945 SFPQ (ENSPCIG00000000923) ZMYM4 (ENSPCIG00000000748) ENSPCIG00000005735 KIAA0319L (ENSPCIG00000000705) NCDN (ENSPCIG00000000687) TFAP2E (ENSPCIG00000000674) ##21 PSMB2 (ENSPCIG00000000656) ENSPCIG00000000636 CLSPN (ENSPCIG00000000623) AGO4 (ENSPCIG00000000092) AGO1 (ENSPCIG00000000172) AGO3 (ENSPCIG00000000198) TEKT2 (ENSPCIG00000000226) ADPRS (ENSPCIG00000000248) COL8A2 (ENSPCIG00000000274) TRAPPC3 (ENSPCIG00000000307) MAP7D1 (ENSPCIG00000024807) THRAP3 (ENSPCIG00000024805) EVA1B (ENSPCIG00000014860) STK40 (ENSPCIG00000014864) LSM10 (ENSPCIG00000014865) Common wonbat MODERN SPECIES 1014 HMGB4 (ENSVURG00010004498) CSMD2 (ENSVURG00010004240) ENSVURG00010004152 GJB5 (ENSVURG00010004123) GJB4 (ENSVURG00010004108) ENSVURG00010004099 GJB3 (ENSVURG00010004087) GJA4 (ENSVURG00010004083) SMIM12 (ENSVURG00010004072) DLGAP3 (ENSVURG00010004031) ENSVURG00010004017 SFPQ (ENSVURG00010003967) ZMYM4 (ENSVURG00010003887) KIAA0319L (ENSVURG00010003844) NCDN (ENSVURG00010003829) TFAP2E (ENSVURG00010003800) ##21 ENSVURG00010003776 C1orf216 (ENSVURG00010003767) CLSPN (ENSVURG00010003394) AGO1 (ENSVURG00010003341) AGO4 (ENSVURG00010003234) TEKT2 (ENSVURG00010003190) ADPRS (ENSVURG00010003186) COL8A2 (ENSVURG00010003181) MAP7D1 (ENSVURG00010003157) THRAP3 (ENSVURG00010003132) ENSVURG00010003118 STK40 (ENSVURG00010003108) LSM10 (ENSVURG00010003089) OSCP1 (ENSVURG00010003056) MRPS15 (ENSVURG00010003030) Wallaby MODERN SPECIES 2577 TFAP2E (ENSMEUG00000013652) ##21 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000026486 ENSSHAG00000003551 ENSSHAG00000027467 C1orf94 (ENSSHAG00000012853) GJB4 (ENSSHAG00000020512) GJB5 (ENSSHAG00000026846) GJB3 (ENSSHAG00000021549) GJA4 (ENSSHAG00000022964) ENSSHAG00000024155 DLGAP3 (ENSSHAG00000026571) ENSSHAG00000029723 ENSSHAG00000016107 ZMYM4 (ENSSHAG00000016398) KIAA0319L (ENSSHAG00000016681) NCDN (ENSSHAG00000016854) TFAP2E (ENSSHAG00000016887) ##21 PSMB2 (ENSSHAG00000021782) ENSSHAG00000030808 CLSPN (ENSSHAG00000017175) ENSSHAG00000017320 AGO1 (ENSSHAG00000017468) AGO3 (ENSSHAG00000029487) TEKT2 (ENSSHAG00000005473) ADPRS (ENSSHAG00000029452) COL8A2 (ENSSHAG00000017647) ENSSHAG00000023429 MAP7D1 (ENSSHAG00000017810) THRAP3 (ENSSHAG00000017932) EVA1B (ENSSHAG00000017973) STK40 (ENSSHAG00000017985) OSCP1 (ENSSHAG00000021302) Opossum MODERN SPECIES 3 ENSMODG00000049041 GJB5 (ENSMODG00000017930) GJB4 (ENSMODG00000017954) GJB3 (ENSMODG00000023349) GJA4 (ENSMODG00000017952) ENSMODG00000043557 DLGAP3 (ENSMODG00000017948) ENSMODG00000017943 ENSMODG00000029342 SFPQ (ENSMODG00000017937) ZMYM4 (ENSMODG00000017927) ENSMODG00000029270 ENSMODG00000047620 KIAA0319L (ENSMODG00000017916) NCDN (ENSMODG00000017906) TFAP2E (ENSMODG00000017904) ##21 ENSMODG00000017902 ENSMODG00000017899 CLSPN (ENSMODG00000017895) AGO4 (ENSMODG00000017888) AGO1 (ENSMODG00000023335) AGO3 (ENSMODG00000017869) TEKT2 (ENSMODG00000017883) ADPRS (ENSMODG00000017880) COL8A2 (ENSMODG00000047645) TRAPPC3 (ENSMODG00000017848) ENSMODG00000048565 ENSMODG00000017834 ENSMODG00000050671 EVA1B (ENSMODG00000017827) STK40 (ENSMODG00000017824) Platypus MODERN SPECIES 7 ENSOANG00000003227 GJB5 (ENSOANG00000010965) GJB4 (ENSOANG00000010967) ENSOANG00000016018 GJB3 (ENSOANG00000010968) GJA4 (ENSOANG00000040460) SMIM12 (ENSOANG00000003225) DLGAP3 (ENSOANG00000049434) ENSOANG00000040800 TMEM35B (ENSOANG00000038316) SFPQ (ENSOANG00000047356) ZMYM4 (ENSOANG00000010569) ENSOANG00000049345 ENSOANG00000010567 NCDN (ENSOANG00000047629) TFAP2E (ENSOANG00000013427) ##21 PSMB2 (ENSOANG00000013424) ENSOANG00000002084 AGO4 (ENSOANG00000002082) AGO1 (ENSOANG00000002080) AGO3 (ENSOANG00000002078) TEKT2 (ENSOANG00000002075) ADPRS (ENSOANG00000038562) ENSOANG00000050098 TRAPPC3 (ENSOANG00000002072) MAP7D1 (ENSOANG00000036062) THRAP3 (ENSOANG00000002070) EVA1B (ENSOANG00000038945) STK40 (ENSOANG00000002067) ENSOANG00000042771 OSCP1 (ENSOANG00000002064) Sauria ANCESTRAL SPECIES 23 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Lepidosauria ANCESTRAL SPECIES 18 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT01050000245043 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00990000210150 tuatara MODERN SPECIES 489 ENSSPUG00000001264 ENSSPUG00000001255 GJA4 (ENSSPUG00000001253) SMIM12 (ENSSPUG00000001240) DLGAP3 (ENSSPUG00000001198) TMEM35B (ENSSPUG00000001188) ENSSPUG00000001136 ZMYM4 (ENSSPUG00000001091) ENSSPUG00000001080 ENSSPUG00000001055 ENSSPUG00000001051 ENSSPUG00000001047 NCDN (ENSSPUG00000001033) TFAP2E (ENSSPUG00000001023) ##21 PSMB2 (ENSSPUG00000001019) ENSSPUG00000000971 CLSPN (ENSSPUG00000000901) AGO4 (ENSSPUG00000000889) AGO1 (ENSSPUG00000000836) AGO3 (ENSSPUG00000000753) TEKT2 (ENSSPUG00000000731) ADPRS (ENSSPUG00000000707) Episquamata ANCESTRAL SPECIES 7 ENSGT01030000235992 ENSGT01060000248564.a.b ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.n.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT01050000245043 ENSGT00940000159550 ENSGT00940000156221 Laterata ANCESTRAL SPECIES 36 ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398.g ENSGT00490000043398.h ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.o ENSGT00950000183029.B.d ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT01050000245043 ENSGT00940000159550 ENSGT00940000156221 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009263 GALE (ENSPMRG00000009268) LYPLA2 (ENSPMRG00000009278) ENSPMRG00000009284 ENSPMRG00000009291 ENSPMRG00000009297 RPL11 (ENSPMRG00000009314) ENSPMRG00000009319 PPT1 (ENSPMRG00000009325) CAP1 (ENSPMRG00000009331) MFSD2A (ENSPMRG00000009360) ENSPMRG00000009464 ENSPMRG00000009500 ENSPMRG00000009664 NCDN (ENSPMRG00000009848) TFAP2E (ENSPMRG00000009858) ##21 PSMB2 (ENSPMRG00000009867) C1orf216 (ENSPMRG00000009878) CLSPN (ENSPMRG00000009895) AGO4 (ENSPMRG00000009986) AGO1 (ENSPMRG00000010343) AGO3 (ENSPMRG00000011185) TEKT2 (ENSPMRG00000011285) ADPRS (ENSPMRG00000011296) COL8A2 (ENSPMRG00000011302) ENSPMRG00000011325 TRAPPC3 (ENSPMRG00000011329) ENSPMRG00000011336 MAP7D1 (ENSPMRG00000011347) ZMYM4 (ENSPMRG00000011364) ENSPMRG00000011405 Argentine black and white tegu MODERN SPECIES 117 MYCBP (ENSSMRG00000000089) RHBDL2 (ENSSMRG00000000112) GALE (ENSSMRG00000000133) LYPLA2 (ENSSMRG00000000196) PITHD1 (ENSSMRG00000000229) C1orf109 (ENSSMRG00000000245) ENSSMRG00000000289 ENSSMRG00000000314 RPL11 (ENSSMRG00000000323) ENSSMRG00000000473 PPT1 (ENSSMRG00000000489) CAP1 (ENSSMRG00000000506) MFSD2A (ENSSMRG00000000547) KIAA0319L (ENSSMRG00000000634) NCDN (ENSSMRG00000000686) TFAP2E (ENSSMRG00000000694) ##21 PSMB2 (ENSSMRG00000000706) C1orf216 (ENSSMRG00000000717) CLSPN (ENSSMRG00000000727) AGO4 (ENSSMRG00000000748) AGO1 (ENSSMRG00000000771) AGO3 (ENSSMRG00000000795) TEKT2 (ENSSMRG00000000826) ADPRS (ENSSMRG00000000851) COL8A2 (ENSSMRG00000000866) TRAPPC3 (ENSSMRG00000000884) Toxicofera ANCESTRAL SPECIES 24 ENSGT00530000063881.a.b ENSGT01060000248564.a.b ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.n.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a Elapidae ANCESTRAL SPECIES 9 ENSGT00530000063881.a.b ENSGT01060000248564.a.b ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.n.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b Indian cobra MODERN SPECIES 11 PNRC2 (ENSNNAG00000006845) CNR2 (ENSNNAG00000006837) FUCA1 (ENSNNAG00000006762) HMGCL (ENSNNAG00000006710) GALE (ENSNNAG00000006671) LYPLA2 (ENSNNAG00000006635) PITHD1 (ENSNNAG00000006613) ENSNNAG00000006525 ENSNNAG00000006508 RPL11 (ENSNNAG00000006486) PPT1 (ENSNNAG00000006467) CAP1 (ENSNNAG00000006446) MFSD2A (ENSNNAG00000006398) KIAA0319L (ENSNNAG00000004866) NCDN (ENSNNAG00000004667) TFAP2E (ENSNNAG00000004641) ##21 PSMB2 (ENSNNAG00000004625) C1orf216 (ENSNNAG00000004613) CLSPN (ENSNNAG00000004320) AGO4 (ENSNNAG00000004226) ENSNNAG00000004037 ENSNNAG00000003994 AGO3 (ENSNNAG00000003944) TRAPPC3 (ENSNNAG00000003916) ENSNNAG00000003869 ENSNNAG00000003814 ADPRS (ENSNNAG00000003788) TEKT2 (ENSNNAG00000003765) ENSNNAG00000003741 MAP7D1 (ENSNNAG00000003692) ZMYM4 (ENSNNAG00000018098) Elapidae_a ANCESTRAL SPECIES 15 ENSGT00530000063881.a.b ENSGT01060000248564.a.b ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.n.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b Acanthophiinae ANCESTRAL SPECIES 22 ENSGT00530000063881.a.b ENSGT01060000248564.a.b ENSGT00440000035378.c ENSGT00940000158484 ENSGT00940000158000 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211.n.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b Mainland tiger snake MODERN SPECIES 138 PNRC2 (ENSNSUG00000019811) CNR2 (ENSNSUG00000019810) FUCA1 (ENSNSUG00000019809) HMGCL (ENSNSUG00000019808) GALE (ENSNSUG00000019807) LYPLA2 (ENSNSUG00000019806) PITHD1 (ENSNSUG00000019805) ENSNSUG00000019804 ENSNSUG00000019803 RPL11 (ENSNSUG00000019802) PPT1 (ENSNSUG00000019801) CAP1 (ENSNSUG00000019800) MFSD2A (ENSNSUG00000019799) KIAA0319L (ENSNSUG00000019796) NCDN (ENSNSUG00000019783) TFAP2E (ENSNSUG00000019781) ##21 PSMB2 (ENSNSUG00000019780) C1orf216 (ENSNSUG00000019779) CLSPN (ENSNSUG00000019773) AGO4 (ENSNSUG00000019763) AGO1 (ENSNSUG00000019762) AGO3 (ENSNSUG00000019741) TRAPPC3 (ENSNSUG00000019740) ENSNSUG00000019738 ADPRS (ENSNSUG00000019737) TEKT2 (ENSNSUG00000019736) ENSNSUG00000019735 ENSNSUG00000019732 ZMYM4 (ENSNSUG00000019714) ENSNSUG00000019713 TMEM35B (ENSNSUG00000019712) Eastern brown snake MODERN SPECIES 19 PNRC2 (ENSPTXG00000001718) CNR2 (ENSPTXG00000001721) FUCA1 (ENSPTXG00000001724) HMGCL (ENSPTXG00000001730) GALE (ENSPTXG00000001733) LYPLA2 (ENSPTXG00000001736) PITHD1 (ENSPTXG00000001740) ENSPTXG00000001742 ENSPTXG00000001745 RPL11 (ENSPTXG00000001747) PPT1 (ENSPTXG00000001749) CAP1 (ENSPTXG00000001751) MFSD2A (ENSPTXG00000001754) KIAA0319L (ENSPTXG00000001757) NCDN (ENSPTXG00000001759) TFAP2E (ENSPTXG00000001764) ##21 PSMB2 (ENSPTXG00000001965) C1orf216 (ENSPTXG00000001966) CLSPN (ENSPTXG00000001973) AGO3 (ENSPTXG00000002013) AGO1 (ENSPTXG00000002024) TRAPPC3 (ENSPTXG00000002025) COL8A2 (ENSPTXG00000002027) ADPRS (ENSPTXG00000002029) ENSPTXG00000002030 ENSPTXG00000002031 ZMYM4 (ENSPTXG00000002416) ENSPTXG00000003410 TMEM35B (ENSPTXG00000003412) ENSPTXG00000003413 DLGAP3 (ENSPTXG00000003414) Blue-lipped sea krait MODERN SPECIES 9458 TFAP2E (ENSLLTG00000015134) ##21 VWA1 (ENSLLTG00000015144) Lizard MODERN SPECIES 1439 ENSACAG00000042252 TFAP2E (ENSACAG00000017357) ##21 PSMB2 (ENSACAG00000017344) C1orf216 (ENSACAG00000017342) CLSPN (ENSACAG00000017337) Archelosauria ANCESTRAL SPECIES 25 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Cryptodira ANCESTRAL SPECIES 31 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a Testudinoidea ANCESTRAL SPECIES 27 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT01050000245043.g.a ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a Testudinidae ANCESTRAL SPECIES 4 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT01050000245043.g.a ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b Goode s thornscrub tortoise MODERN SPECIES 12 GJB4 (ENSGEVG00005007098) ENSGEVG00005007080 GJB3 (ENSGEVG00005007051) GJA4 (ENSGEVG00005007033) SMIM12 (ENSGEVG00005007018) DLGAP3 (ENSGEVG00005006644) ENSGEVG00005006570 TMEM35B (ENSGEVG00005006549) ENSGEVG00005006496 ZMYM4 (ENSGEVG00005006411) ENSGEVG00005006312 ENSGEVG00005006296 ENSGEVG00005006273 KIAA0319L (ENSGEVG00005006206) NCDN (ENSGEVG00005006175) TFAP2E (ENSGEVG00005006139) ##21 PSMB2 (ENSGEVG00005006128) C1orf216 (ENSGEVG00005006043) CLSPN (ENSGEVG00005005870) AGO4 (ENSGEVG00005005791) AGO1 (ENSGEVG00005005703) AGO3 (ENSGEVG00005005639) TEKT2 (ENSGEVG00005005594) ADPRS (ENSGEVG00005005570) ENSGEVG00005005550 ENSGEVG00005005522 TRAPPC3 (ENSGEVG00005005507) ENSGEVG00005005474 MAP7D1 (ENSGEVG00005005319) THRAP3 (ENSGEVG00005005253) ENSGEVG00005005227 Abingdon island giant tortoise MODERN SPECIES 2577 ENSCABG00000006735 ZMYM4 (ENSCABG00000006744) ENSCABG00000007228 ENSCABG00000007229 ENSCABG00000007231 KIAA0319L (ENSCABG00000007240) NCDN (ENSCABG00000007342) TFAP2E (ENSCABG00000007343) ##21 PSMB2 (ENSCABG00000007345) C1orf216 (ENSCABG00000007347) CLSPN (ENSCABG00000007352) AGO4 (ENSCABG00000007476) AGO1 (ENSCABG00000013412) ENSCABG00000015096 AGO3 (ENSCABG00000015112) TEKT2 (ENSCABG00000015179) ADPRS (ENSCABG00000015185) COL8A2 (ENSCABG00000015187) TRAPPC3 (ENSCABG00000015191) ENSCABG00000015195 MAP7D1 (ENSCABG00000015201) THRAP3 (ENSCABG00000015214) EVA1B (ENSCABG00000015223) Emydidae ANCESTRAL SPECIES 39 ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT01050000245043.g.a ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a painted turtle MODERN SPECIES 6 GJB4 (ENSCPBG00000018710) ENSCPBG00000018708 GJB3 (ENSCPBG00000018701) GJA4 (ENSCPBG00000018698) SMIM12 (ENSCPBG00000018693) DLGAP3 (ENSCPBG00000018687) ENSCPBG00000018683 TMEM35B (ENSCPBG00000018680) SFPQ (ENSCPBG00000018674) ZMYM4 (ENSCPBG00000018655) ENSCPBG00000018647 ENSCPBG00000018645 ENSCPBG00000018635 KIAA0319L (ENSCPBG00000018629) NCDN (ENSCPBG00000018626) TFAP2E (ENSCPBG00000018622) ##21 PSMB2 (ENSCPBG00000018619) C1orf216 (ENSCPBG00000018616) CLSPN (ENSCPBG00000018609) AGO4 (ENSCPBG00000018602) AGO1 (ENSCPBG00000018594) AGO3 (ENSCPBG00000018583) TEKT2 (ENSCPBG00000018573) ADPRS (ENSCPBG00000018548) COL8A2 (ENSCPBG00000018546) TRAPPC3 (ENSCPBG00000018543) ENSCPBG00000018540 MAP7D1 (ENSCPBG00000018535) THRAP3 (ENSCPBG00000018530) EVA1B (ENSCPBG00000018526) STK40 (ENSCPBG00000018522) Three-toed box turtle MODERN SPECIES 111 ENSTMTG00000005475 GJB4 (ENSTMTG00000005483) ENSTMTG00000005489 GJB3 (ENSTMTG00000005494) GJA4 (ENSTMTG00000005509) SMIM12 (ENSTMTG00000005528) DLGAP3 (ENSTMTG00000005580) ENSTMTG00000006056 TMEM35B (ENSTMTG00000006072) SFPQ (ENSTMTG00000006083) ZMYM4 (ENSTMTG00000006118) ENSTMTG00000006187 ENSTMTG00000006206 KIAA0319L (ENSTMTG00000006239) NCDN (ENSTMTG00000006282) TFAP2E (ENSTMTG00000006307) ##21 PSMB2 (ENSTMTG00000006329) C1orf216 (ENSTMTG00000006346) CLSPN (ENSTMTG00000006379) AGO4 (ENSTMTG00000006524) AGO1 (ENSTMTG00000006686) AGO3 (ENSTMTG00000008722) TEKT2 (ENSTMTG00000009035) ADPRS (ENSTMTG00000009056) ENSTMTG00000009071 ENSTMTG00000009081 TRAPPC3 (ENSTMTG00000009095) ENSTMTG00000009113 MAP7D1 (ENSTMTG00000009142) THRAP3 (ENSTMTG00000009191) ENSTMTG00000009216 Chinese turtle MODERN SPECIES 1263 GJB5 (ENSPSIG00000012731) DLGAP3 (ENSPSIG00000012002) ENSPSIG00000011697 SFPQ (ENSPSIG00000011494) ZMYM4 (ENSPSIG00000011439) ENSPSIG00000011420 KIAA0319L (ENSPSIG00000011353) NCDN (ENSPSIG00000011228) TFAP2E (ENSPSIG00000011168) ##21 PSMB2 (ENSPSIG00000011043) Archosauria ANCESTRAL SPECIES 22 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Australian saltwater crocodile MODERN SPECIES 57 GJB4 (ENSCPRG00005000227) ENSCPRG00005000221 GJB3 (ENSCPRG00005000203) GJA4 (ENSCPRG00005000195) SMIM12 (ENSCPRG00005000185) DLGAP3 (ENSCPRG00005000178) ENSCPRG00005000152 TMEM35B (ENSCPRG00005000149) SFPQ (ENSCPRG00005000143) ZMYM4 (ENSCPRG00005000067) ENSCPRG00005000056 ENSCPRG00005000055 ENSCPRG00005000054 KIAA0319L (ENSCPRG00005018106) NCDN (ENSCPRG00005018100) TFAP2E (ENSCPRG00005018096) ##21 PSMB2 (ENSCPRG00005018095) C1orf216 (ENSCPRG00005018091) CLSPN (ENSCPRG00005018085) AGO4 (ENSCPRG00005018080) AGO1 (ENSCPRG00005018066) AGO3 (ENSCPRG00005018060) TEKT2 (ENSCPRG00005018048) ADPRS (ENSCPRG00005018046) COL8A2 (ENSCPRG00005018043) TRAPPC3 (ENSCPRG00005018040) ENSCPRG00005018030 RLF (ENSCPRG00005018025) ZMPSTE24 (ENSCPRG00005018021) KDM1A (ENSCPRG00005017751) LUZP1 (ENSCPRG00005017649) Aves ANCESTRAL SPECIES 28 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 African ostrich MODERN SPECIES 1006 SFPQ (ENSSCUG00000013705) ZMYM4 (ENSSCUG00000013700) ENSSCUG00000013694 KIAA0319L (ENSSCUG00000013690) NCDN (ENSSCUG00000013688) TFAP2E (ENSSCUG00000013687) ##21 PSMB2 (ENSSCUG00000013686) CLSPN (ENSSCUG00000013684) AGO1 (ENSSCUG00000013683) AGO4 (ENSSCUG00000013678) AGO3 (ENSSCUG00000013668) TEKT2 (ENSSCUG00000013666) ADPRS (ENSSCUG00000013665) ENSSCUG00000013663 TRAPPC3 (ENSSCUG00000013662) Neognathae ANCESTRAL SPECIES 26 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Galloanserae ANCESTRAL SPECIES 25 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Anatidae ANCESTRAL SPECIES 21 ENSGT00940000161290 ENSGT00940000159768 ENSGT00940000169330 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000159550 ENSGT01030000238234 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00390000004808 Duck MODERN SPECIES 15 COL9A2 (ENSAPLG00000003493) CSMD2 (ENSAPLG00000004505) ENSAPLG00000001785 GJB5 (ENSAPLG00000001783) GJB3 (ENSAPLG00000001770) GJA4 (ENSAPLG00000001756) SMIM12 (ENSAPLG00000001748) DLGAP3 (ENSAPLG00000003910) ENSAPLG00000016724 TMEM35B (ENSAPLG00000017324) ENSAPLG00000003643 ZMYM4 (ENSAPLG00000002899) ENSAPLG00000018446 KIAA0319L (ENSAPLG00000009379) NCDN (ENSAPLG00000009984) TFAP2E (ENSAPLG00000010002) ##21 PSMB2 (ENSAPLG00000010006) CLSPN (ENSAPLG00000011178) AGO4 (ENSAPLG00000010882) AGO1 (ENSAPLG00000010440) AGO3 (ENSAPLG00000009642) TEKT2 (ENSAPLG00000009574) ADPRS (ENSAPLG00000009421) COL8A2 (ENSAPLG00000025608) THRAP3 (ENSAPLG00000009009) EVA1B (ENSAPLG00000025602) STK40 (ENSAPLG00000008561) GRIK3 (ENSAPLG00000007300) ZC3H12A (ENSAPLG00000024542) MEAF6 (ENSAPLG00000007127) DNALI1 (ENSAPLG00000006770) Pink-footed goose MODERN SPECIES 73 ENSABRG00000020795 ENSABRG00000020799 GJB5 (ENSABRG00000020800) ENSABRG00000020801 GJB3 (ENSABRG00000020802) GJA4 (ENSABRG00000020803) SMIM12 (ENSABRG00000020804) DLGAP3 (ENSABRG00000020807) ENSABRG00000020820 TMEM35B (ENSABRG00000020823) ENSABRG00000020825 ZMYM4 (ENSABRG00000020832) ENSABRG00000020838 KIAA0319L (ENSABRG00000020845) NCDN (ENSABRG00000020848) TFAP2E (ENSABRG00000020852) ##21 PSMB2 (ENSABRG00000020856) C1orf216 (ENSABRG00000020859) CLSPN (ENSABRG00000020864) AGO3 (ENSABRG00000020889) TEKT2 (ENSABRG00000020906) ADPRS (ENSABRG00000020915) COL8A2 (ENSABRG00000020919) TRAPPC3 (ENSABRG00000020920) MAP7D1 (ENSABRG00000020951) THRAP3 (ENSABRG00000021040) STK40 (ENSABRG00000021045) OSCP1 (ENSABRG00000021050) CSF3R (ENSABRG00000021053) GRIK3 (ENSABRG00000021061) ZC3H12A (ENSABRG00000021065) Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES 24 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Phasianidae_b ANCESTRAL SPECIES 23 ENSGT00940000161290 ENSGT00960000189425 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Chicken MODERN SPECIES 15 ENSGALG00010017123 C1orf94 (ENSGALG00010017117) CSMD2 (ENSGALG00010017101) GJB5 (ENSGALG00010017020) ENSGALG00010017835 GJB3 (ENSGALG00010016960) GJA4 (ENSGALG00010016953) DLGAP3 (ENSGALG00010013936) ENSGALG00010013922 ENSGALG00010013915 SFPQ (ENSGALG00010013890) ZMYM4 (ENSGALG00010013880) IFI27L2 (ENSGALG00010013837) KIAA0319L (ENSGALG00010013772) NCDN (ENSGALG00010013719) TFAP2E (ENSGALG00010013698) ##21 PSMB2 (ENSGALG00010015046) C1orf216 (ENSGALG00010015032) CLSPN (ENSGALG00010015027) AGO4 (ENSGALG00010015009) AGO1 (ENSGALG00010014990) AGO3 (ENSGALG00010014949) TEKT2 (ENSGALG00010014905) ADPRHL2 (ENSGALG00010018267) COL8A2 (ENSGALG00010014897) TRAPPC3 (ENSGALG00010014859) MAP7D1 (ENSGALG00010014806) THRAP3 (ENSGALG00010014795) EVA1B (ENSGALG00010014780) STK40 (ENSGALG00010014762) LSM10 (ENSGALG00010014745) Japanese quail MODERN SPECIES 15 ENSCJPG00005017112 ENSCJPG00005017109 GJB5 (ENSCJPG00005017108) ENSCJPG00005017107 GJB3 (ENSCJPG00005017106) GJA4 (ENSCJPG00005017105) SMIM12 (ENSCJPG00005017103) DLGAP3 (ENSCJPG00005017102) ENSCJPG00005017101 TMEM35B (ENSCJPG00005017100) SFPQ (ENSCJPG00005017099) ZMYM4 (ENSCJPG00005017094) ENSCJPG00005017090 KIAA0319L (ENSCJPG00005017087) NCDN (ENSCJPG00005017086) ENSCJPG00005017085 ##21 ENSCJPG00005017083 ##21 PSMB2 (ENSCJPG00005017082) C1orf216 (ENSCJPG00005017080) CLSPN (ENSCJPG00005017068) AGO4 (ENSCJPG00005017064) AGO1 (ENSCJPG00005017061) AGO3 (ENSCJPG00005017055) TEKT2 (ENSCJPG00005017051) ADPRS (ENSCJPG00005017049) COL8A2 (ENSCJPG00005017048) TRAPPC3 (ENSCJPG00005017040) MAP7D1 (ENSCJPG00005017036) THRAP3 (ENSCJPG00005017025) EVA1B (ENSCJPG00005017024) STK40 (ENSCJPG00005017020) Phasianidae ANCESTRAL SPECIES ENSGT00950000182848.c.b.b.a.b ##21 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000182848.c.b.b.a.b ##21 Turkey MODERN SPECIES 17 ENSMGAG00000003614 ENSMGAG00000018617 ENSMGAG00000003640 ENSMGAG00000021587 ENSMGAG00000003386 ENSMGAG00000003713 ENSMGAG00000021309 ENSMGAG00000003732 TEKT2 (ENSMGAG00000003750) AGO1 (ENSMGAG00000003822) ENSMGAG00000019105 ENSMGAG00000003851 ENSMGAG00000018964 ENSMGAG00000003920 ENSMGAG00000003986 ENSMGAG00000004014 ##21 ENSMGAG00000004027 ENSMGAG00000004047 ZMYM4 (ENSMGAG00000004092) ENSMGAG00000017895 ENSMGAG00000004265 ENSMGAG00000020321 ENSMGAG00000004237 ENSMGAG00000004270 GJA4 (ENSMGAG00000016540) SMIM12 (ENSMGAG00000015709) ENSMGAG00000004308 ENSMGAG00000021151 GJB3 (ENSMGAG00000022402) ENSMGAG00000017784 ENSMGAG00000004314 Japanese quail MODERN SPECIES 15 ENSCJPG00005017109 GJB5 (ENSCJPG00005017108) ENSCJPG00005017107 GJB3 (ENSCJPG00005017106) GJA4 (ENSCJPG00005017105) SMIM12 (ENSCJPG00005017103) DLGAP3 (ENSCJPG00005017102) ENSCJPG00005017101 TMEM35B (ENSCJPG00005017100) SFPQ (ENSCJPG00005017099) ZMYM4 (ENSCJPG00005017094) ENSCJPG00005017090 KIAA0319L (ENSCJPG00005017087) NCDN (ENSCJPG00005017086) ENSCJPG00005017085 ##21 ENSCJPG00005017083 ##21 PSMB2 (ENSCJPG00005017082) C1orf216 (ENSCJPG00005017080) CLSPN (ENSCJPG00005017068) AGO4 (ENSCJPG00005017064) AGO1 (ENSCJPG00005017061) AGO3 (ENSCJPG00005017055) TEKT2 (ENSCJPG00005017051) ADPRS (ENSCJPG00005017049) COL8A2 (ENSCJPG00005017048) TRAPPC3 (ENSCJPG00005017040) MAP7D1 (ENSCJPG00005017036) THRAP3 (ENSCJPG00005017025) EVA1B (ENSCJPG00005017024) STK40 (ENSCJPG00005017020) LSM10 (ENSCJPG00005017018) Neognathae_b ANCESTRAL SPECIES 26 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Neognathae_c ANCESTRAL SPECIES 31 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT01050000245043 ENSGT01080000259115 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Kakapo MODERN SPECIES 6 ENSSHBG00005011073 GJB5 (ENSSHBG00005011053) ENSSHBG00005011038 GJB3 (ENSSHBG00005011026) GJA4 (ENSSHBG00005011010) SMIM12 (ENSSHBG00005010996) DLGAP3 (ENSSHBG00005010972) ENSSHBG00005010935 TMEM35B (ENSSHBG00005010910) SFPQ (ENSSHBG00005010847) ZMYM4 (ENSSHBG00005010771) ENSSHBG00005010728 ENSSHBG00005010707 KIAA0319L (ENSSHBG00005005834) NCDN (ENSSHBG00005005408) TFAP2E (ENSSHBG00005005377) ##21 PSMB2 (ENSSHBG00005000735) C1orf216 (ENSSHBG00005000717) CLSPN (ENSSHBG00005000707) AGO4 (ENSSHBG00005019185) AGO1 (ENSSHBG00005017278) AGO3 (ENSSHBG00005017167) TEKT2 (ENSSHBG00005017157) ADPRS (ENSSHBG00005017149) COL8A2 (ENSSHBG00005017145) TRAPPC3 (ENSSHBG00005017143) MAP7D1 (ENSSHBG00005017141) THRAP3 (ENSSHBG00005017133) EVA1B (ENSSHBG00005017124) STK40 (ENSSHBG00005017111) LSM10 (ENSSHBG00005017106) Golden eagle MODERN SPECIES 7 ENSACCG00020007879 CSMD2 (ENSACCG00020007812) GJB5 (ENSACCG00020007750) GJB3 (ENSACCG00020007742) GJA4 (ENSACCG00020007736) SMIM12 (ENSACCG00020007729) DLGAP3 (ENSACCG00020007714) ENSACCG00020007702 TMEM35B (ENSACCG00020007691) ENSACCG00020007676 ZMYM4 (ENSACCG00020007551) ENSACCG00020007509 ENSACCG00020007498 KIAA0319L (ENSACCG00020007466) NCDN (ENSACCG00020007449) TFAP2E (ENSACCG00020007424) ##21 PSMB2 (ENSACCG00020007392) CLSPN (ENSACCG00020007318) AGO4 (ENSACCG00020007268) AGO1 (ENSACCG00020007246) AGO3 (ENSACCG00020007221) TEKT2 (ENSACCG00020007198) ADPRS (ENSACCG00020007187) COL8A2 (ENSACCG00020007180) TRAPPC3 (ENSACCG00020007167) MAP7D1 (ENSACCG00020007137) THRAP3 (ENSACCG00020007064) EVA1B (ENSACCG00020007041) STK40 (ENSACCG00020007023) LSM10 (ENSACCG00020007012) OSCP1 (ENSACCG00020016654) Passeriformes ANCESTRAL SPECIES 23 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Great tit MODERN SPECIES 15 COL9A2 (ENSPMJG00000006298) CSMD2 (ENSPMJG00000006321) GJB5 (ENSPMJG00000006613) GJB3 (ENSPMJG00000006615) ENSPMJG00000006616 GJA4 (ENSPMJG00000006617) SMIM12 (ENSPMJG00000006618) DLGAP3 (ENSPMJG00000006622) ENSPMJG00000006630 TMEM35B (ENSPMJG00000006631) SFPQ (ENSPMJG00000006633) ZMYM4 (ENSPMJG00000006638) ENSPMJG00000006658 KIAA0319L (ENSPMJG00000006673) NCDN (ENSPMJG00000006675) TFAP2E (ENSPMJG00000006676) ##21 PSMB2 (ENSPMJG00000006678) C1orf216 (ENSPMJG00000006680) CLSPN (ENSPMJG00000006682) AGO4 (ENSPMJG00000006688) ENSPMJG00000006707 ENSPMJG00000006708 AGO3 (ENSPMJG00000006709) TEKT2 (ENSPMJG00000006712) ADPRS (ENSPMJG00000006718) COL8A2 (ENSPMJG00000006720) TRAPPC3 (ENSPMJG00000006723) MAP7D1 (ENSPMJG00000006724) THRAP3 (ENSPMJG00000006749) EVA1B (ENSPMJG00000006755) STK40 (ENSPMJG00000006758) Passeriformes_d ANCESTRAL SPECIES 23 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Flycatcher MODERN SPECIES 15 CSMD2 (ENSFALG00000000698) ENSFALG00000025538 GJB5 (ENSFALG00000024416) ENSFALG00000014259 GJB3 (ENSFALG00000026077) GJA4 (ENSFALG00000014269) ENSFALG00000014271 DLGAP3 (ENSFALG00000000726) ENSFALG00000026305 TMEM35B (ENSFALG00000026074) SFPQ (ENSFALG00000000731) ZMYM4 (ENSFALG00000000734) ENSFALG00000024613 KIAA0319L (ENSFALG00000000740) NCDN (ENSFALG00000000742) TFAP2E (ENSFALG00000027366) ##21 PSMB2 (ENSFALG00000024999) C1orf216 (ENSFALG00000014273) CLSPN (ENSFALG00000000773) AGO1 (ENSFALG00000000790) ADPRS (ENSFALG00000028684) ENSFALG00000023448 TRAPPC3 (ENSFALG00000000832) ENSFALG00000000835 ENSFALG00000000824 MAP7D1 (ENSFALG00000000837) THRAP3 (ENSFALG00000000840) ENSFALG00000028751 STK40 (ENSFALG00000000846) LSM10 (ENSFALG00000028374) OSCP1 (ENSFALG00000000855) Passeriformes_g ANCESTRAL SPECIES 22 ENSGT00940000161290 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Medium ground finch MODERN SPECIES 181 SMAP2 (ENSGFOG00000013521) COL9A2 (ENSGFOG00000013515) CSMD2 (ENSGFOG00000013474) GJB5 (ENSGFOG00000013453) ENSGFOG00000013452 GJB3 (ENSGFOG00000013451) GJA4 (ENSGFOG00000013450) SMIM12 (ENSGFOG00000013446) DLGAP3 (ENSGFOG00000013443) ENSGFOG00000013438 TMEM35B (ENSGFOG00000013433) SFPQ (ENSGFOG00000013419) ZMYM4 (ENSGFOG00000013027) KIAA0319L (ENSGFOG00000012978) NCDN (ENSGFOG00000012974) TFAP2E (ENSGFOG00000012972) ##21 PSMB2 (ENSGFOG00000012966) CLSPN (ENSGFOG00000012960) AGO4 (ENSGFOG00000012950) AGO1 (ENSGFOG00000012946) AGO3 (ENSGFOG00000012927) TEKT2 (ENSGFOG00000012924) ADPRS (ENSGFOG00000012920) ENSGFOG00000012918 TRAPPC3 (ENSGFOG00000012915) THRAP3 (ENSGFOG00000012887) STK40 (ENSGFOG00000012876) LSM10 (ENSGFOG00000012872) OSCP1 (ENSGFOG00000012865) MRPS15 (ENSGFOG00000012856) CSF3R (ENSGFOG00000012850) Passeroidea ANCESTRAL SPECIES 22 ENSGT00940000161290 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b ENSGT00950000183163.a.a ENSGT00940000154096.b.b.b.b.a ENSGT00950000182986.b ENSGT00510000048364 Zebra finch MODERN SPECIES 16 COL9A2 (ENSTGUG00000021444) CSMD2 (ENSTGUG00000001744) ENSTGUG00000027655 GJB5 (ENSTGUG00000024360) ENSTGUG00000018960 GJB3 (ENSTGUG00000001742) GJA4 (ENSTGUG00000021611) SMIM12 (ENSTGUG00000029111) DLGAP3 (ENSTGUG00000001734) ENSTGUG00000025466 TMEM35B (ENSTGUG00000001682) SFPQ (ENSTGUG00000001722) ZMYM4 (ENSTGUG00000001709) KIAA0319L (ENSTGUG00000001687) NCDN (ENSTGUG00000001681) TFAP2E (ENSTGUG00000001672) ##21 PSMB2 (ENSTGUG00000001663) C1orf216 (ENSTGUG00000029067) CLSPN (ENSTGUG00000001651) AGO4 (ENSTGUG00000024123) ENSTGUG00000021564 AGO1 (ENSTGUG00000001631) AGO3 (ENSTGUG00000014986) TEKT2 (ENSTGUG00000001625) ADPRS (ENSTGUG00000001622) COL8A2 (ENSTGUG00000001619) TRAPPC3 (ENSTGUG00000001616) MAP7D1 (ENSTGUG00000020289) THRAP3 (ENSTGUG00000001606) EVA1B (ENSTGUG00000025865) STK40 (ENSTGUG00000001603) Common canary MODERN SPECIES 49 ENSSCAG00000015673 CSMD2 (ENSSCAG00000015618) ENSSCAG00000015548 GJB5 (ENSSCAG00000015545) ENSSCAG00000015544 GJB3 (ENSSCAG00000015541) GJA4 (ENSSCAG00000015540) DLGAP3 (ENSSCAG00000015534) ENSSCAG00000015529 TMEM35B (ENSSCAG00000015528) SFPQ (ENSSCAG00000015523) ZMYM4 (ENSSCAG00000015467) ENSSCAG00000015439 KIAA0319L (ENSSCAG00000015436) NCDN (ENSSCAG00000015432) TFAP2E (ENSSCAG00000015421) ##21 PSMB2 (ENSSCAG00000015418) C1orf216 (ENSSCAG00000015416) CLSPN (ENSSCAG00000015411) ENSSCAG00000015409 ENSSCAG00000015404 ENSSCAG00000015403 ENSSCAG00000015399 AGO3 (ENSSCAG00000015396) TEKT2 (ENSSCAG00000015389) ADPRS (ENSSCAG00000015386) COL8A2 (ENSSCAG00000015381) TRAPPC3 (ENSSCAG00000015380) MAP7D1 (ENSSCAG00000015376) THRAP3 (ENSSCAG00000015371) EVA1B (ENSSCAG00000015366) Coelacanth MODERN SPECIES 249 gjb10 (ENSLACG00000010171) GJB3 (ENSLACG00000010649) GJA4 (ENSLACG00000011082) SMIM12 (ENSLACG00000011441) DLGAP3 (ENSLACG00000011753) ENSLACG00000014213 ENSLACG00000014349 TMEM35B (ENSLACG00000014567) SFPQ (ENSLACG00000014728) ZMYM4 (ENSLACG00000014949) zgc:91910 (ENSLACG00000015220) KIAA0319L (ENSLACG00000015470) NCDN (ENSLACG00000015791) TFAP2E (ENSLACG00000015883) ##21 PSMB2 (ENSLACG00000016163) C1orf216 (ENSLACG00000016550) CLSPN (ENSLACG00000016826) AGO4 (ENSLACG00000016888) AGO1 (ENSLACG00000017009) TEKT2 (ENSLACG00000017301) ADPRS (ENSLACG00000017349) ENSLACG00000017370 COL8A2 (ENSLACG00000017396) TRAPPC3 (ENSLACG00000017830) angpt2b (ENSLACG00000017925) ENSLACG00000017969 MAP7D1 (ENSLACG00000018102) THRAP3 (ENSLACG00000018229) ENSLACG00000018225 Actinopterygii ANCESTRAL SPECIES 191 ENSGT00940000159550 ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000015369 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D Neopterygii ANCESTRAL SPECIES 196 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00390000015369 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D Osteoglossocephalai ANCESTRAL SPECIES 25 ENSGT00390000002919 ENSGT00940000158451 ENSGT00940000154576 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000163923 ENSGT00940000160932 Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00940000154576 ENSGT00940000159550.g ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT01050000244827.E.f ENSGT00950000183029.B.j ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000162649 ENSGT00940000164843.b Asian bonytongue MODERN SPECIES 15 ak2 (ENSSFOG00015009206) ENSSFOG00015009224 sfpq (ENSSFOG00015028929) lypla2 (ENSSFOG00015029087) pithd1 (ENSSFOG00015022511) eloa (ENSSFOG00015022482) ENSSFOG00015022469 rpl11 (ENSSFOG00015022461) ENSSFOG00015030161 eef1a1l1 (ENSSFOG00015022408) ENSSFOG00015022372 ppt1 (ENSSFOG00015022355) cap1 (ENSSFOG00015022342) KIAA0319L (ENSSFOG00015022311) NCDN (ENSSFOG00015022278) tfap2e (ENSSFOG00015025522) ##21 psmb2 (ENSSFOG00015022111) ENSSFOG00015029261 CLSPN (ENSSFOG00015022075) ago4 (ENSSFOG00015022028) ENSSFOG00015022008 C1orf109 (ENSSFOG00015021989) cdca8 (ENSSFOG00015021970) ENSSFOG00015021938 ENSSFOG00015021910 ENSSFOG00015021896 ENSSFOG00015021854 zgc:114119 (ENSSFOG00015021849) ENSSFOG00015021769 ENSSFOG00015021711 ENSSFOG00015021693 #8 P. kingsleyae MODERN SPECIES 27 sfpq (ENSPKIG00000023035) lypla2 (ENSPKIG00000023009) pithd1 (ENSPKIG00000022990) eloa (ENSPKIG00000022960) ENSPKIG00000022938 rpl11 (ENSPKIG00000022926) ENSPKIG00000022911 ENSPKIG00000022899 ENSPKIG00000022886 ENSPKIG00000022865 ENSPKIG00000022835 ppt1 (ENSPKIG00000022808) cap1 (ENSPKIG00000022783) ENSPKIG00000022762 NCDN (ENSPKIG00000022739) tfap2e (ENSPKIG00000022714) ##21 psmb2 (ENSPKIG00000022685) ENSPKIG00000022675 CLSPN (ENSPKIG00000022647) ago4 (ENSPKIG00000022598) ENSPKIG00000022578 c19h1orf109 (ENSPKIG00000022562) cdca8 (ENSPKIG00000022545) ENSPKIG00000022520 ENSPKIG00000022486 ENSPKIG00000022438 ENSPKIG00000022335 ENSPKIG00000022263 zgc:114119 (ENSPKIG00000022225) ENSPKIG00000022201 ENSPKIG00000022175 Clupeocephala ANCESTRAL SPECIES 40 ENSGT00940000158451 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000166582 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00390000016823 Euteleosteomorpha ANCESTRAL SPECIES 40 ENSGT00940000158451 ENSGT00940000154576 ENSGT00940000166582 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b ENSGT00940000163960.a Acanthomorphata ANCESTRAL SPECIES 70 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Euacanthomorphacea ANCESTRAL SPECIES 24 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005019186 ENSMMDG00005019189 oscp1a (ENSMMDG00005019191) LSM10 (ENSMMDG00005019195) eva1bb (ENSMMDG00005019196) thrap3b (ENSMMDG00005019200) map7d1b (ENSMMDG00005019203) stpg1 (ENSMMDG00005019205) meaf6 (ENSMMDG00005019209) fhl3b (ENSMMDG00005019214) rragcb (ENSMMDG00005019217) ppt1 (ENSMMDG00005019225) cap1 (ENSMMDG00005019452) KIAA0319L (ENSMMDG00005019489) NCDN (ENSMMDG00005020974) tfap2e (ENSMMDG00005020979) ##21 psmb2 (ENSMMDG00005020981) cdca5 (ENSMMDG00005020983) ENSMMDG00005020984 CLSPN (ENSMMDG00005020985) ago4 (ENSMMDG00005021010) ENSMMDG00005021937 c19h1orf109 (ENSMMDG00005021940) cdca8 (ENSMMDG00005021943) ENSMMDG00005021946 ENSMMDG00005021954 ENSMMDG00005021959 ENSMMDG00005021963 ENSMMDG00005021983 anxa14 (ENSMMDG00005021986) zgc:114119 (ENSMMDG00005001172) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Tiger tail seahorse MODERN SPECIES 328 nedd9 (ENSHCOG00000004279) smim13 (ENSHCOG00000004269) zc3h12ab (ENSHCOG00000004255) oscp1a (ENSHCOG00000004224) eva1bb (ENSHCOG00000004121) thrap3b (ENSHCOG00000004098) ENSHCOG00000004092 meaf6 (ENSHCOG00000004069) fhl3b (ENSHCOG00000004026) ppt1 (ENSHCOG00000004004) rragcb (ENSHCOG00000003986) cap1 (ENSHCOG00000003977) KIAA0319L (ENSHCOG00000003961) NCDN (ENSHCOG00000003839) tfap2e (ENSHCOG00000003827) ##21 psmb2 (ENSHCOG00000003803) ENSHCOG00000003772 ENSHCOG00000003758 CLSPN (ENSHCOG00000003741) ago4 (ENSHCOG00000003725) cdca8 (ENSHCOG00000003685) c19h1orf109 (ENSHCOG00000003649) ENSHCOG00000003643 ENSHCOG00000003630 ENSHCOG00000003617 ENSHCOG00000003603 anxa14 (ENSHCOG00000003554) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Eupercaria ANCESTRAL SPECIES 11 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Tetraodontidae ANCESTRAL SPECIES 43 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b.e ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Fugu MODERN SPECIES 3 smim13 (ENSTRUG00000025620) smim13 (ENSTRUG00000020110) ENSTRUG00000010565 ENSTRUG00000025207 LSM10 (ENSTRUG00000010531) eva1bb (ENSTRUG00000010516) thrap3b (ENSTRUG00000010336) map7d1b (ENSTRUG00000010226) meaf6 (ENSTRUG00000010159) fhl3b (ENSTRUG00000010010) rragcb (ENSTRUG00000009884) ppt1 (ENSTRUG00000009602) cap1 (ENSTRUG00000009345) KIAA0319L (ENSTRUG00000009252) NCDN (ENSTRUG00000009054) tfap2e (ENSTRUG00000008956) ##21 psmb2 (ENSTRUG00000008871) cdca5 (ENSTRUG00000008868) ENSTRUG00000019824 CLSPN (ENSTRUG00000008616) ago4 (ENSTRUG00000008052) ENSTRUG00000007934 C1orf109 (ENSTRUG00000024339) cdca8 (ENSTRUG00000007782) ENSTRUG00000007751 ENSTRUG00000006367 ENSTRUG00000005759 ENSTRUG00000005618 ENSTRUG00000005038 anxa14 (ENSTRUG00000004568) zgc:114119 (ENSTRUG00000030461) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Ballan wrasse MODERN SPECIES 613 ENSLBEG00000011097 cap1 (ENSLBEG00000011060) KIAA0319L (ENSLBEG00000011002) NCDN (ENSLBEG00000010924) tfap2e (ENSLBEG00000010874) ##21 psmb2 (ENSLBEG00000010835) cdca5 (ENSLBEG00000010812) ENSLBEG00000010799 ENSLBEG00000010771 ENSLBEG00000010747 ago4 (ENSLBEG00000010670) c19h1orf109 (ENSLBEG00000010631) ENSLBEG00000010609 cdca8 (ENSLBEG00000010560) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Perciformes ANCESTRAL SPECIES 11 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00950000183031.A.a.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Channel bull blenny MODERN SPECIES 2 zc3h12ab (ENSCGOG00000009896) ENSCGOG00000009889 oscp1a (ENSCGOG00000009863) LSM10 (ENSCGOG00000009858) eva1bb (ENSCGOG00000009852) thrap3b (ENSCGOG00000009838) map7d1b (ENSCGOG00000009797) stpg1 (ENSCGOG00000009789) meaf6 (ENSCGOG00000009716) fhl3b (ENSCGOG00000009706) rragcb (ENSCGOG00000009623) ppt1 (ENSCGOG00000009478) cap1 (ENSCGOG00000009184) KIAA0319L (ENSCGOG00000008351) NCDN (ENSCGOG00000008308) tfap2e (ENSCGOG00000008293) ##21 psmb2 (ENSCGOG00000008253) cdca5 (ENSCGOG00000008246) ENSCGOG00000008245 CLSPN (ENSCGOG00000008234) ago4 (ENSCGOG00000005647) ENSCGOG00000005608 c19h1orf109 (ENSCGOG00000005606) cdca8 (ENSCGOG00000005605) ENSCGOG00000005598 ENSCGOG00000003939 ENSCGOG00000003806 ENSCGOG00000003788 anxa14 (ENSCGOG00000003783) zgc:114119 (ENSCGOG00000003780) ENSCGOG00000003775 Pike perch MODERN SPECIES 13 ENSSLUG00000004309 ENSSLUG00000004314 oscp1a (ENSSLUG00000004327) LSM10 (ENSSLUG00000004403) eva1bb (ENSSLUG00000004412) thrap3b (ENSSLUG00000004422) map7d1b (ENSSLUG00000004454) stpg1 (ENSSLUG00000004518) meaf6 (ENSSLUG00000004526) fhl3b (ENSSLUG00000004540) rragcb (ENSSLUG00000004552) ppt1 (ENSSLUG00000004585) cap1 (ENSSLUG00000004853) KIAA0319L (ENSSLUG00000004935) NCDN (ENSSLUG00000005782) tfap2e (ENSSLUG00000005788) ##21 psmb2 (ENSSLUG00000005805) cdca5 (ENSSLUG00000005818) ENSSLUG00000005827 CLSPN (ENSSLUG00000005829) ago4 (ENSSLUG00000006092) ENSSLUG00000011352 c19h1orf109 (ENSSLUG00000011355) cdca8 (ENSSLUG00000011358) ENSSLUG00000011365 ENSSLUG00000011385 ENSSLUG00000011490 ENSSLUG00000011593 ENSSLUG00000013550 ENSSLUG00000013630 anxa14 (ENSSLUG00000013646) Cottioidei ANCESTRAL SPECIES 16 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Lumpfish MODERN SPECIES 2 smim13 (ENSCLMG00005022112) zc3h12ab (ENSCLMG00005022113) oscp1a (ENSCLMG00005022114) LSM10 (ENSCLMG00005022117) eva1bb (ENSCLMG00005022118) thrap3b (ENSCLMG00005022119) map7d1b (ENSCLMG00005022121) stpg1 (ENSCLMG00005022122) meaf6 (ENSCLMG00005022124) fhl3b (ENSCLMG00005022125) rragcb (ENSCLMG00005022126) ppt1 (ENSCLMG00005022130) cap1 (ENSCLMG00005022185) KIAA0319L (ENSCLMG00005022250) NCDN (ENSCLMG00005022416) tfap2e (ENSCLMG00005022419) ##21 psmb2 (ENSCLMG00005022422) cdca5 (ENSCLMG00005022429) ENSCLMG00005022430 CLSPN (ENSCLMG00005022434) ago4 (ENSCLMG00005022462) ENSCLMG00005022728 c19h1orf109 (ENSCLMG00005022729) cdca8 (ENSCLMG00005022730) ENSCLMG00005022732 ENSCLMG00005022739 ENSCLMG00005022795 ENSCLMG00005022798 anxa14 (ENSCLMG00005022803) zgc:114119 (ENSCLMG00005022804) ENSCLMG00005022805 Stickleback MODERN SPECIES 9 slc52a2 (ENSGACG00000002556) ENSGACG00000002562 ENSGACG00000002563 pleca (ENSGACG00000002566) trhrb (ENSGACG00000002573) nudcd1 (ENSGACG00000002575) pkhd1l1.2 (ENSGACG00000002583) map7d1b (ENSGACG00000002607) meaf6 (ENSGACG00000002615) fhl3b (ENSGACG00000002619) rragcb (ENSGACG00000002629) ppt1 (ENSGACG00000002641) cap1 (ENSGACG00000002653) KIAA0319L (ENSGACG00000002660) NCDN (ENSGACG00000002669) tfap2e (ENSGACG00000002672) ##21 psmb2 (ENSGACG00000002674) cdca5 (ENSGACG00000002675) ENSGACG00000002678 ENSGACG00000002679 ago4 (ENSGACG00000002683) ENSGACG00000002688 c19h1orf109 (ENSGACG00000002689) cdca8 (ENSGACG00000002694) ENSGACG00000002696 ENSGACG00000002703 ENSGACG00000002716 ENSGACG00000002719 anxa14 (ENSGACG00000002726) ENSGACG00000002738 zgc:114119 (ENSGACG00000002740) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00390000016823 ENSGT00390000012412 Gilthead seabream MODERN SPECIES 17 smim13 (ENSSAUG00010004360) zc3h12ab (ENSSAUG00010004363) oscp1a (ENSSAUG00010004367) ENSSAUG00010004375 LSM10 (ENSSAUG00010004379) eva1bb (ENSSAUG00010004385) thrap3b (ENSSAUG00010004395) map7d1b (ENSSAUG00010004404) stpg1 (ENSSAUG00010004417) ppt1 (ENSSAUG00010004438) fhl3b (ENSSAUG00010004524) rragcb (ENSSAUG00010004527) cap1 (ENSSAUG00010004535) KIAA0319L (ENSSAUG00010005044) NCDN (ENSSAUG00010008396) tfap2e (ENSSAUG00010008399) ##21 psmb2 (ENSSAUG00010008400) cdca5 (ENSSAUG00010008401) ENSSAUG00010008403 CLSPN (ENSSAUG00010008404) ago4 (ENSSAUG00010008440) c19h1orf109 (ENSSAUG00010010428) ENSSAUG00010010430 cdca8 (ENSSAUG00010010431) ENSSAUG00010010433 ENSSAUG00010010436 ENSSAUG00010010463 ENSSAUG00010012520 ENSSAUG00010012523 anxa14 (ENSSAUG00010012529) zgc:114119 (ENSSAUG00010012533) Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00950000183031.A.a.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00390000016823 ENSGT00390000012412 European seabass MODERN SPECIES 22 zc3h12ab (ENSDLAG00005002900) ENSDLAG00005035131 oscp1a (ENSDLAG00005002331) LSM10 (ENSDLAG00005002297) eva1bb (ENSDLAG00005002280) thrap3b (ENSDLAG00005018774) map7d1b (ENSDLAG00005018751) stpg1 (ENSDLAG00005026697) meaf6 (ENSDLAG00005018732) fhl3b (ENSDLAG00005018713) rragcb (ENSDLAG00005018704) ppt1 (ENSDLAG00005032737) ENSDLAG00005017641 KIAA0319L (ENSDLAG00005016664) NCDN (ENSDLAG00005016625) tfap2e (ENSDLAG00005016618) ##21 ENSDLAG00005016605 beta 2 (ENSDLAG00005034806) CLSPN (ENSDLAG00005016583) AGO4 (ENSDLAG00005013573) ENSDLAG00005013457 ENSDLAG00005030850 ENSDLAG00005013419 ENSDLAG00005033397 ENSDLAG00005013377 ENSDLAG00005013254 anxa14 (ENSDLAG00005013235) ENSDLAG00005030748 ENSDLAG00005013174 ENSDLAG00005013215 ENSDLAG00005013130 Large yellow croaker MODERN SPECIES 484 ENSLCRG00005020362 oscp1a (ENSLCRG00005020381) LSM10 (ENSLCRG00005020471) eva1bb (ENSLCRG00005020472) thrap3b (ENSLCRG00005020473) map7d1b (ENSLCRG00005020478) stpg1 (ENSLCRG00005000640) meaf6 (ENSLCRG00005000657) fhl3b (ENSLCRG00005000684) rragcb (ENSLCRG00005000695) ppt1 (ENSLCRG00005000758) cap1 (ENSLCRG00005001693) KIAA0319L (ENSLCRG00005002018) ENSLCRG00005004848 NCDN (ENSLCRG00005004849) tfap2e (ENSLCRG00005004851) ##21 psmb2 (ENSLCRG00005004853) cdca5 (ENSLCRG00005004865) ENSLCRG00005004866 CLSPN (ENSLCRG00005004867) ago4 (ENSLCRG00005004900) ENSLCRG00005009051 c19h1orf109 (ENSLCRG00005009052) cdca8 (ENSLCRG00005009055) ENSLCRG00005009065 ENSLCRG00005009078 ENSLCRG00005010007 ENSLCRG00005010008 anxa14 (ENSLCRG00005010012) ENSLCRG00005010014 zgc:114119 (ENSLCRG00005010016) Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Carangaria ANCESTRAL SPECIES 14 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Carangaria_A ANCESTRAL SPECIES 16 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Seriola ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Yellowtail amberjack MODERN SPECIES 3177 SYNGR1 (ENSSLDG00000021324) TAB1 (ENSSLDG00000021352) MGAT3 (ENSSLDG00000021389) ENSSLDG00000021410 ENSSLDG00000021426 ENSSLDG00000021455 ENSSLDG00000021461 atf4a (ENSSLDG00000021470) ENSSLDG00000021484 fhl3b (ENSSLDG00000021488) rragcb (ENSSLDG00000021509) ppt1 (ENSSLDG00000021546) cap1 (ENSSLDG00000021580) KIAA0319L (ENSSLDG00000021622) NCDN (ENSSLDG00000021667) tfap2e (ENSSLDG00000021682) ##21 psmb2 (ENSSLDG00000021694) ENSSLDG00000021707 ENSSLDG00000021715 CLSPN (ENSSLDG00000021723) ENSSLDG00000021829 ago4 (ENSSLDG00000021841) c19h1orf109 (ENSSLDG00000021866) ENSSLDG00000021878 cdca8 (ENSSLDG00000021883) ENSSLDG00000021902 ENSSLDG00000021938 ENSSLDG00000021973 ENSSLDG00000022010 anxa14 (ENSSLDG00000022089) zgc:114119 (ENSSLDG00000022102) Greater amberjack MODERN SPECIES 48 ENSSDUG00000000266 ENSSDUG00000000199 lrp12 (ENSSDUG00000000133) ENSSDUG00000000074 wdyhv1 (ENSSDUG00000021121) bop1 (ENSSDUG00000021097) HSF1 (ENSSDUG00000021039) rnmt (ENSSDUG00000021026) ENSSDUG00000021021 fhl3b (ENSSDUG00000021013) rragcb (ENSSDUG00000021000) ppt1 (ENSSDUG00000020980) cap1 (ENSSDUG00000020949) KIAA0319L (ENSSDUG00000020920) NCDN (ENSSDUG00000020911) tfap2e (ENSSDUG00000020894) ##21 psmb2 (ENSSDUG00000020882) ENSSDUG00000020874 ENSSDUG00000020869 CLSPN (ENSSDUG00000020843) ago4 (ENSSDUG00000020781) C1orf109 (ENSSDUG00000020767) cdca8 (ENSSDUG00000020732) ENSSDUG00000020675 ENSSDUG00000020625 ENSSDUG00000020610 ENSSDUG00000020585 anxa14 (ENSSDUG00000020553) zgc:114119 (ENSSDUG00000020541) ENSSDUG00000020501 tpmt.1 (ENSSDUG00000020477) Barramundi perch MODERN SPECIES 293 stpg1 (ENSLCAG00010021733) meaf6 (ENSLCAG00010021725) fhl3b (ENSLCAG00010021716) rragcb (ENSLCAG00010021700) ppt1 (ENSLCAG00010021693) cap1 (ENSLCAG00010021655) KIAA0319L (ENSLCAG00010021644) NCDN (ENSLCAG00010021639) tfap2e (ENSLCAG00010021638) ##21 psmb2 (ENSLCAG00010021613) ENSLCAG00010021608 ENSLCAG00010021604 ago4 (ENSLCAG00010020527) ENSLCAG00010020268 c19h1orf109 (ENSLCAG00010020266) cdca8 (ENSLCAG00010020263) ENSLCAG00010020254 ENSLCAG00010020146 ENSLCAG00010020106 ENSLCAG00010020090 anxa14 (ENSLCAG00010020080) Pleuronectoidei ANCESTRAL SPECIES 33 ENSGT00940000155107.a.a.b ENSGT00940000177439 ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00950000183031.A.a.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00390000016823 Tongue sole MODERN SPECIES 9 smim13 (ENSCSEG00000010342) zc3h12ab (ENSCSEG00000010348) oscp1a (ENSCSEG00000010362) LSM10 (ENSCSEG00000010374) eva1bb (ENSCSEG00000010382) thrap3b (ENSCSEG00000010392) map7d1b (ENSCSEG00000010416) stpg1 (ENSCSEG00000010471) meaf6 (ENSCSEG00000010482) fhl3b (ENSCSEG00000010500) rragcb (ENSCSEG00000010508) ppt1 (ENSCSEG00000010527) cap1 (ENSCSEG00000010543) ENSCSEG00000010571 NCDN (ENSCSEG00000010623) tfap2e (ENSCSEG00000010632) ##21 psmb2 (ENSCSEG00000010643) cdca5 (ENSCSEG00000010655) ENSCSEG00000010661 CLSPN (ENSCSEG00000010681) ago4 (ENSCSEG00000010696) ENSCSEG00000010728 c19h1orf109 (ENSCSEG00000010736) cdca8 (ENSCSEG00000010742) ENSCSEG00000010755 ENSCSEG00000010762 ENSCSEG00000010768 ENSCSEG00000010775 ENSCSEG00000010807 anxa14 (ENSCSEG00000010827) ENSCSEG00000010841 Turbot MODERN SPECIES 14 zc3h12ab (ENSSMAG00000001367) ENSSMAG00000021680 oscp1a (ENSSMAG00000001314) LSM10 (ENSSMAG00000001297) eva1bb (ENSSMAG00000001280) thrap3b (ENSSMAG00000001259) map7d1b (ENSSMAG00000001191) stpg1 (ENSSMAG00000035705) meaf6 (ENSSMAG00000001163) fhl3b (ENSSMAG00000001140) rragcb (ENSSMAG00000001115) ppt1 (ENSSMAG00000001080) ENSSMAG00000001063 KIAA0319L (ENSSMAG00000001024) NCDN (ENSSMAG00000001017) TFAP2E (ENSSMAG00000000991) ##21 ENSSMAG00000037330 ENSSMAG00000000955 CLSPN (ENSSMAG00000000941) ago4 (ENSSMAG00000000808) ENSSMAG00000000785 ENSSMAG00000000763 cdca8 (ENSSMAG00000020539) ENSSMAG00000020524 ENSSMAG00000020492 ENSSMAG00000020467 ENSSMAG00000015908 ENSSMAG00000020447 ENSSMAG00000033173 ENSSMAG00000020439 sdc2 (ENSSMAG00000036151) Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00950000183031.A.a.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Zig-zag eel MODERN SPECIES 2 ENSMAMG00000004529 ENSMAMG00000027271 oscp1a (ENSMAMG00000004443) ENSMAMG00000028468 eva1bb (ENSMAMG00000025345) thrap3b (ENSMAMG00000004348) map7d1b (ENSMAMG00000004292) stpg1 (ENSMAMG00000004237) meaf6 (ENSMAMG00000004214) fhl3b (ENSMAMG00000004199) rragcb (ENSMAMG00000004171) ppt1 (ENSMAMG00000004148) ENSMAMG00000004094 KIAA0319L (ENSMAMG00000004065) NCDN (ENSMAMG00000004058) TFAP2E (ENSMAMG00000004022) ##21 psmb2 (ENSMAMG00000003992) ENSMAMG00000003988 ENSMAMG00000003980 CLSPN (ENSMAMG00000003927) ago4 (ENSMAMG00000003874) ENSMAMG00000003839 ENSMAMG00000026857 cdca8 (ENSMAMG00000003792) ENSMAMG00000025438 ENSMAMG00000028145 ENSMAMG00000003681 ENSMAMG00000003666 ENSMAMG00000003644 anxa14 (ENSMAMG00000003573) ENSMAMG00000003539 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01100000264503 ENSGT00390000010887.b Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000022051 ENSBSLG00000022042 oscp1a (ENSBSLG00000022029) LSM10 (ENSBSLG00000022026) eva1bb (ENSBSLG00000022015) thrap3b (ENSBSLG00000021994) map7d1b (ENSBSLG00000021935) stpg1 (ENSBSLG00000021909) meaf6 (ENSBSLG00000021881) fhl3b (ENSBSLG00000021855) rragcb (ENSBSLG00000021829) ppt1 (ENSBSLG00000021676) cap1 (ENSBSLG00000021643) KIAA0319L (ENSBSLG00000021191) NCDN (ENSBSLG00000020347) tfap2e (ENSBSLG00000020341) ##21 psmb2 (ENSBSLG00000020317) cdca5 (ENSBSLG00000020313) ENSBSLG00000020312 CLSPN (ENSBSLG00000020294) ago4 (ENSBSLG00000019879) ENSBSLG00000019513 c19h1orf109 (ENSBSLG00000019504) cdca8 (ENSBSLG00000019490) ENSBSLG00000019409 ENSBSLG00000019254 ENSBSLG00000019186 ENSBSLG00000019097 zgc:114119 (ENSBSLG00000019038) ENSBSLG00000019009 tpmt.1 (ENSBSLG00000018821) Climbing perch MODERN SPECIES 2 zc3h12ab (ENSATEG00000006140) ENSATEG00000006247 oscp1a (ENSATEG00000006263) LSM10 (ENSATEG00000006310) eva1bb (ENSATEG00000006328) thrap3b (ENSATEG00000006350) map7d1b (ENSATEG00000006432) stpg1 (ENSATEG00000006457) meaf6 (ENSATEG00000006466) fhl3b (ENSATEG00000006513) rragcb (ENSATEG00000006525) ppt1 (ENSATEG00000028900) ENSATEG00000006592 KIAA0319L (ENSATEG00000006607) NCDN (ENSATEG00000006619) TFAP2E (ENSATEG00000006627) ##21 psmb2 (ENSATEG00000006643) ENSATEG00000006679 ENSATEG00000006685 CLSPN (ENSATEG00000006697) ago4 (ENSATEG00000006717) ENSATEG00000006755 ENSATEG00000027623 cdca8 (ENSATEG00000006762) ENSATEG00000006784 ENSATEG00000006846 ENSATEG00000006924 ENSATEG00000006981 anxa14 (ENSATEG00000028720) ENSATEG00000027857 ENSATEG00000007095 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Atherinomorphae ANCESTRAL SPECIES 52 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439 ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Cyprinodontoidei ANCESTRAL SPECIES 60 ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b NAME_4 ANCESTRAL SPECIES 178 ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729.n ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 Mummichog MODERN SPECIES 474 fhl3b (ENSFHEG00000019162) ENSFHEG00000019180 ppt1 (ENSFHEG00000019205) cap1 (ENSFHEG00000019243) ENSFHEG00000019289 ENSFHEG00000019302 ENSFHEG00000019323 tfap2e (ENSFHEG00000000768) ##21 psmb2 (ENSFHEG00000019370) cdca5 (ENSFHEG00000019385) ENSFHEG00000019393 CLSPN (ENSFHEG00000019597) ago4 (ENSFHEG00000019658) ENSFHEG00000019678 ENSFHEG00000019733 zgc:114119 (ENSFHEG00000019760) anxa14 (ENSFHEG00000019769) ENSFHEG00000019777 ENSFHEG00000019848 ENSFHEG00000019936 ENSFHEG00000019950 Sheepshead minnow MODERN SPECIES 583 meaf6 (ENSCVAG00000017635) fhl3b (ENSCVAG00000017614) rragcb (ENSCVAG00000017608) ppt1 (ENSCVAG00000017599) cap1 (ENSCVAG00000017565) ENSCVAG00000017529 NCDN (ENSCVAG00000017472) tfap2e (ENSCVAG00000017461) ##21 psmb2 (ENSCVAG00000017416) ENSCVAG00000017396 ENSCVAG00000017379 CLSPN (ENSCVAG00000017371) ENSCVAG00000017357 ago4 (ENSCVAG00000017336) ENSCVAG00000017317 zgc:114119 (ENSCVAG00000016993) anxa14 (ENSCVAG00000016854) ENSCVAG00000016831 ENSCVAG00000016746 ENSCVAG00000016702 GABARAPL2 (ENSCVAG00000016653) TMC3 (ENSCVAG00000016633) ENSCVAG00000016567 Poeciliinae ANCESTRAL SPECIES 24 ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b Poecilia ANCESTRAL SPECIES 73 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000170176 ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 NAME_6 ANCESTRAL SPECIES 199 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000170176 ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 Sailfin molly MODERN SPECIES 1230 rragcb (ENSPLAG00000011802) ppt1 (ENSPLAG00000011779) cap1 (ENSPLAG00000011756) KIAA0319L (ENSPLAG00000011744) NCDN (ENSPLAG00000011672) tfap2e (ENSPLAG00000011663) ##21 psmb2 (ENSPLAG00000011645) cdca5 (ENSPLAG00000011624) ENSPLAG00000011614 CLSPN (ENSPLAG00000011602) ago4 (ENSPLAG00000011534) ENSPLAG00000011474 Amazon molly MODERN SPECIES 658 eya3 (ENSPFOG00000000356) ENSPFOG00000000423 ENSPFOG00000020489 oscp1a (ENSPFOG00000000446) LSM10 (ENSPFOG00000020490) eva1bb (ENSPFOG00000000508) thrap3b (ENSPFOG00000000525) map7d1b (ENSPFOG00000000581) meaf6 (ENSPFOG00000000680) fhl3b (ENSPFOG00000000748) rragcb (ENSPFOG00000000814) ppt1 (ENSPFOG00000000883) cap1 (ENSPFOG00000001012) KIAA0319L (ENSPFOG00000001224) NCDN (ENSPFOG00000001489) tfap2e (ENSPFOG00000001600) ##21 psmb2 (ENSPFOG00000001718) cdca5 (ENSPFOG00000001777) ENSPFOG00000024371 CLSPN (ENSPFOG00000001788) ago4 (ENSPFOG00000001935) ENSPFOG00000002334 zgc:114119 (ENSPFOG00000002726) anxa14 (ENSPFOG00000002795) ENSPFOG00000002936 ENSPFOG00000003103 ENSPFOG00000003221 ENSPFOG00000003513 ENSPFOG00000022761 ENSPFOG00000023464 Guppy MODERN SPECIES 441 smim13 (ENSPREG00000009828) eya3 (ENSPREG00000009854) ENSPREG00000009866 ENSPREG00000009875 oscp1a (ENSPREG00000009882) LSM10 (ENSPREG00000009899) ENSPREG00000009908 thrap3b (ENSPREG00000009927) meaf6 (ENSPREG00000009968) fhl3b (ENSPREG00000010000) rragcb (ENSPREG00000010016) ppt1 (ENSPREG00000010053) cap1 (ENSPREG00000010113) KIAA0319L (ENSPREG00000010131) NCDN (ENSPREG00000010167) tfap2e (ENSPREG00000010182) ##21 psmb2 (ENSPREG00000010199) cdca5 (ENSPREG00000010215) ENSPREG00000010216 CLSPN (ENSPREG00000010244) ago4 (ENSPREG00000010315) ENSPREG00000010386 ENSPREG00000010398 ENSPREG00000010404 ENSPREG00000010494 ENSPREG00000011300 ENSPREG00000011327 ENSPREG00000011369 anxa14 (ENSPREG00000011403) Platyfish MODERN SPECIES 4 ENSXMAG00000017971 ENSXMAG00000028082 ENSXMAG00000028561 ENSXMAG00000004775 LSM10 (ENSXMAG00000019963) eva1bb (ENSXMAG00000017970) thrap3b (ENSXMAG00000017962) map7d1b (ENSXMAG00000003534) meaf6 (ENSXMAG00000003525) fhl3b (ENSXMAG00000003516) rragcb (ENSXMAG00000013223) ppt1 (ENSXMAG00000003488) cap1 (ENSXMAG00000028529) KIAA0319L (ENSXMAG00000003454) NCDN (ENSXMAG00000027698) tfap2e (ENSXMAG00000003446) ##21 psmb2 (ENSXMAG00000016616) cdca5 (ENSXMAG00000022429) ENSXMAG00000021351 CLSPN (ENSXMAG00000016634) ago4 (ENSXMAG00000016657) ENSXMAG00000027954 ENSXMAG00000016688 zgc:114119 (ENSXMAG00000024303) anxa14 (ENSXMAG00000016728) ENSXMAG00000016751 ENSXMAG00000016765 ENSXMAG00000016771 ENSXMAG00000028150 ENSXMAG00000021813 ENSXMAG00000028114 Aplocheiloidei ANCESTRAL SPECIES 129 ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 Mangrove rivulus MODERN SPECIES 462 rragcb (ENSKMAG00000018876) ppt1 (ENSKMAG00000018850) cap1 (ENSKMAG00000018793) KIAA0319L (ENSKMAG00000018761) NCDN (ENSKMAG00000018744) tfap2e (ENSKMAG00000018717) ##21 psmb2 (ENSKMAG00000018698) cdca5 (ENSKMAG00000018685) ENSKMAG00000018682 CLSPN (ENSKMAG00000018666) ago4 (ENSKMAG00000018602) ENSKMAG00000018569 c19h1orf109 (ENSKMAG00000018559) cdca8 (ENSKMAG00000018541) ENSKMAG00000018526 ENSKMAG00000018500 cetn3 (ENSKMAG00000018437) Turquoise killifish MODERN SPECIES 1614 sim1a (ENSNFUG00015002959) ENSNFUG00015002949 ENSNFUG00015002948 ASCC3 (ENSNFUG00015002007) GRIK2 (ENSNFUG00015000764) ENSNFUG00015000349 ENSNFUG00015000345 ENSNFUG00015000337 HACE1 (ENSNFUG00015000286) ENSNFUG00015000232 popdc3 (ENSNFUG00015000217) ENSNFUG00015000200 Nfu_g_1_016842 (ENSNFUG00015000182) SLC6A20 (ENSNFUG00015000145) NCDN (ENSNFUG00015000082) ENSNFUG00015000070 ##21 CABZ01054933.1 (ENSNFUG00015004580) SULT2ST3 (ENSNFUG00015004557) tmem147 (ENSNFUG00015004536) ENSNFUG00015004522 gapdhs (ENSNFUG00015004492) ENSNFUG00015004480 SCXA (ENSNFUG00015004476) ENSNFUG00015004466 hpn (ENSNFUG00015004460) CD22 (ENSNFUG00015004447) ENSNFUG00015004438 ENSNFUG00015004430 ENSNFUG00015004426 ENSNFUG00015004421 ENSNFUG00015004403 Oryzias ANCESTRAL SPECIES 23 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00940000177439.a ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Oryzias_b ANCESTRAL SPECIES 27 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00940000177439.a ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00950000183031.A.a.a ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000166692 ENSGT00390000010887.b.e ENSGT00940000163960.a Javanese ricefish MODERN SPECIES 2 smim13 (ENSOJAG00000001654) zc3h12ab (ENSOJAG00000001643) ENSOJAG00000001634 ENSOJAG00000001622 oscp1a (ENSOJAG00000018623) LSM10 (ENSOJAG00000018606) eva1bb (ENSOJAG00000018573) thrap3b (ENSOJAG00000018559) map7d1b (ENSOJAG00000018478) meaf6 (ENSOJAG00000018430) fhl3b (ENSOJAG00000018420) rragcb (ENSOJAG00000018406) ENSOJAG00000018375 cap1 (ENSOJAG00000018135) KIAA0319L (ENSOJAG00000017300) tfap2e (ENSOJAG00000017207) ##21 psmb2 (ENSOJAG00000017149) ENSOJAG00000017111 EIF2C4 (ENSOJAG00000015300) ENSOJAG00000015245 c19h1orf109 (ENSOJAG00000015238) cdca8 (ENSOJAG00000015123) ENSOJAG00000015107 ENSOJAG00000014949 ENSOJAG00000014477 anxa14 (ENSOJAG00000014460) zgc:114119 (ENSOJAG00000014449) ENSOJAG00000014422 tpmt.1 (ENSOJAG00000014399) ENSOJAG00000014392 sdc2 (ENSOJAG00000014379) Indian medaka MODERN SPECIES 3 ENSOMEG00000005607 ENSOMEG00000005619 ENSOMEG00000005633 oscp1a (ENSOMEG00000005663) ENSOMEG00000005680 eva1bb (ENSOMEG00000005691) thrap3b (ENSOMEG00000005716) map7d1b (ENSOMEG00000005865) meaf6 (ENSOMEG00000005907) fhl3b (ENSOMEG00000005944) rragcb (ENSOMEG00000000957) ppt1 (ENSOMEG00000006005) cap1 (ENSOMEG00000006049) KIAA0319L (ENSOMEG00000006068) NCDN (ENSOMEG00000006095) tfap2e (ENSOMEG00000000143) ##21 ENSOMEG00000006212 psmb2 (ENSOMEG00000006246) cdca5 (ENSOMEG00000006255) ENSOMEG00000006270 CLSPN (ENSOMEG00000006343) ago4 (ENSOMEG00000006399) ENSOMEG00000006427 c19h1orf109 (ENSOMEG00000006433) cdca8 (ENSOMEG00000006469) ENSOMEG00000006525 ENSOMEG00000006585 ENSOMEG00000006604 ENSOMEG00000006630 anxa14 (ENSOMEG00000006657) zgc:114119 (ENSOMEG00000006693) Oryzias_a ANCESTRAL SPECIES 18 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Japanese Medaka HdrR MODERN SPECIES 2 ENSORLG00000009473 ENSORLG00000027497 ENSORLG00000028537 oscp1a (ENSORLG00000009500) ENSORLG00000028326 LSM10 (ENSORLG00000009504) eva1bb (ENSORLG00000009511) thrap3b (ENSORLG00000009543) map7d1b (ENSORLG00000009561) meaf6 (ENSORLG00000021858) rragcb (ENSORLG00000009645) ppt1 (ENSORLG00000009676) cap1 (ENSORLG00000009709) KIAA0319L (ENSORLG00000009728) NCDN (ENSORLG00000009735) tfap2e (ENSORLG00000022744) ##21 psmb2 (ENSORLG00000009748) cdca5 (ENSORLG00000009754) ENSORLG00000027383 CLSPN (ENSORLG00000009781) ago4 (ENSORLG00000009865) ENSORLG00000009875 c19h1orf109 (ENSORLG00000009883) cdca8 (ENSORLG00000009938) ENSORLG00000009982 ENSORLG00000029443 ENSORLG00000010009 ENSORLG00000010069 ENSORLG00000010025 anxa14 (ENSORLG00000010101) zgc:114119 (ENSORLG00000010118) Chinese medaka MODERN SPECIES 659 ENSOSIG00000021721 ENSOSIG00000021725 ENSOSIG00000021733 oscp1a (ENSOSIG00000021743) LSM10 (ENSOSIG00000021747) eva1bb (ENSOSIG00000021751) thrap3b (ENSOSIG00000021772) ENSOSIG00000021805 meaf6 (ENSOSIG00000021815) fhl3b (ENSOSIG00000021818) rragcb (ENSOSIG00000021848) ppt1 (ENSOSIG00000021993) cap1 (ENSOSIG00000022267) KIAA0319L (ENSOSIG00000022341) NCDN (ENSOSIG00000022696) tfap2e (ENSOSIG00000022704) ##21 psmb2 (ENSOSIG00000022707) ENSOSIG00000022708 ENSOSIG00000022710 ENSOSIG00000022714 ago4 (ENSOSIG00000022728) c19h1orf109 (ENSOSIG00000022768) ENSOSIG00000022770 cdca8 (ENSOSIG00000022775) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Pomacentridae ANCESTRAL SPECIES 95 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.u ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729.o ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 Pomacentridae_A ANCESTRAL SPECIES 132 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b.c ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.u ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729.o ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 Amphiprion ANCESTRAL SPECIES 158 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364.e ENSGT00510000048364.f ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b.c ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT01000000216251 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536.u ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729.o ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 Orange clownfish MODERN SPECIES 8 thrap3b (ENSAPEG00000021862) ENSAPEG00000021890 eva1bb (ENSAPEG00000021900) ENSAPEG00000021910 stpg1 (ENSAPEG00000021982) meaf6 (ENSAPEG00000022021) fhl3b (ENSAPEG00000022036) ENSAPEG00000022058 rragcb (ENSAPEG00000022074) ppt1 (ENSAPEG00000022102) cap1 (ENSAPEG00000022140) KIAA0319L (ENSAPEG00000022186) ENSAPEG00000022202 ENSAPEG00000022212 NCDN (ENSAPEG00000022220) tfap2e (ENSAPEG00000022240) ##21 psmb2 (ENSAPEG00000022265) cdca5 (ENSAPEG00000022283) ENSAPEG00000022289 CLSPN (ENSAPEG00000022309) ENSAPEG00000022417 ago4 (ENSAPEG00000022426) ENSAPEG00000022494 c19h1orf109 (ENSAPEG00000022514) cdca8 (ENSAPEG00000022523) ENSAPEG00000022569 ENSAPEG00000022601 Clown anemonefish MODERN SPECIES 904 ENSAOCG00000012170 ENSAOCG00000012185 tfap2e (ENSAOCG00000012209) ##21 Spiny chromis MODERN SPECIES 1638 NCDN (ENSAPOG00000015969) tfap2e (ENSAPOG00000016184) ##21 psmb2 (ENSAPOG00000016202) cdca5 (ENSAPOG00000016217) Bicolor damselfish MODERN SPECIES 2548 NCDN (ENSSPAG00000020277) tfap2e (ENSSPAG00000020010) ##21 Cichlidae ANCESTRAL SPECIES 7 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b.j ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00390000010118.c.a.b.j ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000155107.a.a.b ENSGT01070000254348 ENSGT01100000263769.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000156539.z ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000155107.a.a.b ENSGT01070000254348 ENSGT01100000263769.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000156539.z ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00390000010118.c.a.b.i.a ENSGT01090000260364.b.b.a ENSGT00390000010118.c.a.b.j ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00390000010028 ENSGT00940000169005 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000156539.z ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00990000206601 Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026301 ENSMZEG00005026303 oscp1a (ENSMZEG00005026304) LSM10 (ENSMZEG00005026307) eva1bb (ENSMZEG00005026308) thrap3b (ENSMZEG00005026309) map7d1b (ENSMZEG00005026312) stpg1 (ENSMZEG00005026316) meaf6 (ENSMZEG00005026320) fhl3b (ENSMZEG00005026323) rragcb (ENSMZEG00005026324) ppt1 (ENSMZEG00005026327) cap1 (ENSMZEG00005026329) KIAA0319L (ENSMZEG00005026332) NCDN (ENSMZEG00005026335) tfap2e (ENSMZEG00005026336) ##21 psmb2 (ENSMZEG00005026338) ENSMZEG00005026340 ENSMZEG00005026343 CLSPN (ENSMZEG00005026344) ago4 (ENSMZEG00005026346) ENSMZEG00005026347 c19h1orf109 (ENSMZEG00005026348) cdca8 (ENSMZEG00005026349) ENSMZEG00005026351 ENSMZEG00005026352 ENSMZEG00005026353 ENSMZEG00005026355 ENSMZEG00005026358 ENSMZEG00005026361 ENSMZEG00005026363 Eastern happy MODERN SPECIES 13 ENSACLG00000004674 ENSACLG00000004680 oscp1a (ENSACLG00000004687) LSM10 (ENSACLG00000004728) eva1bb (ENSACLG00000004750) thrap3b (ENSACLG00000004763) map7d1b (ENSACLG00000004864) stpg1 (ENSACLG00000004902) meaf6 (ENSACLG00000004907) fhl3b (ENSACLG00000004926) rragcb (ENSACLG00000004938) ppt1 (ENSACLG00000004957) cap1 (ENSACLG00000004977) KIAA0319L (ENSACLG00000004999) NCDN (ENSACLG00000005026) tfap2e (ENSACLG00000005058) ##21 psmb2 (ENSACLG00000005086) ENSACLG00000005115 ENSACLG00000005127 CLSPN (ENSACLG00000005132) ago4 (ENSACLG00000005181) ENSACLG00000005287 c19h1orf109 (ENSACLG00000005310) cdca8 (ENSACLG00000005321) ENSACLG00000005350 ENSACLG00000005365 ENSACLG00000005401 ENSACLG00000005414 ENSACLG00000005432 ENSACLG00000005487 ENSACLG00000005522 P. nyererei MODERN SPECIES 388 ENSPNYG00000003253 ENSPNYG00000003238 oscp1a (ENSPNYG00000003173) LSM10 (ENSPNYG00000003138) eva1bb (ENSPNYG00000003106) thrap3b (ENSPNYG00000003062) map7d1b (ENSPNYG00000003016) stpg1 (ENSPNYG00000002988) meaf6 (ENSPNYG00000002859) fhl3b (ENSPNYG00000002809) rragcb (ENSPNYG00000002775) ppt1 (ENSPNYG00000002732) cap1 (ENSPNYG00000002687) KIAA0319L (ENSPNYG00000002650) NCDN (ENSPNYG00000002533) tfap2e (ENSPNYG00000002494) ##21 psmb2 (ENSPNYG00000002470) cdca5 (ENSPNYG00000002457) ENSPNYG00000002405 CLSPN (ENSPNYG00000002159) ago4 (ENSPNYG00000002089) ENSPNYG00000002046 c19h1orf109 (ENSPNYG00000002036) cdca8 (ENSPNYG00000001940) ENSPNYG00000001909 Burton s mouthbrooder MODERN SPECIES 524 ENSHBUG00000001743 ENSHBUG00000001735 oscp1a (ENSHBUG00000001728) LSM10 (ENSHBUG00000001722) eva1bb (ENSHBUG00000001719) thrap3b (ENSHBUG00000001708) map7d1b (ENSHBUG00000001680) stpg1 (ENSHBUG00000001653) meaf6 (ENSHBUG00000001648) fhl3b (ENSHBUG00000001636) rragcb (ENSHBUG00000001632) ppt1 (ENSHBUG00000001625) cap1 (ENSHBUG00000001615) KIAA0319L (ENSHBUG00000001599) NCDN (ENSHBUG00000001587) tfap2e (ENSHBUG00000001580) ##21 psmb2 (ENSHBUG00000001568) cdca5 (ENSHBUG00000001559) ENSHBUG00000001554 CLSPN (ENSHBUG00000001542) ago4 (ENSHBUG00000001525) c19h1orf109 (ENSHBUG00000001509) ENSHBUG00000001506 cdca8 (ENSHBUG00000001503) ENSHBUG00000001497 ENSHBUG00000001492 ENSHBUG00000001483 ENSHBUG00000001475 ENSHBUG00000001468 anxa14 (ENSHBUG00000001459) Lyretail cichlid MODERN SPECIES 322 zc3h12ab (ENSNBRG00000014376) ENSNBRG00000014359 oscp1a (ENSNBRG00000014319) LSM10 (ENSNBRG00000014306) eva1bb (ENSNBRG00000014294) thrap3b (ENSNBRG00000014237) map7d1b (ENSNBRG00000014183) stpg1 (ENSNBRG00000014134) meaf6 (ENSNBRG00000014080) fhl3b (ENSNBRG00000014055) rragcb (ENSNBRG00000014036) ppt1 (ENSNBRG00000014017) cap1 (ENSNBRG00000013979) ENSNBRG00000013921 ENSNBRG00000013858 tfap2e (ENSNBRG00000013819) ##21 psmb2 (ENSNBRG00000013797) ENSNBRG00000013760 ENSNBRG00000013713 CLSPN (ENSNBRG00000013539) ago4 (ENSNBRG00000013492) ENSNBRG00000013473 c19h1orf109 (ENSNBRG00000013460) cdca8 (ENSNBRG00000013397) ENSNBRG00000013388 ENSNBRG00000013384 ENSNBRG00000013358 ENSNBRG00000013340 ENSNBRG00000013297 anxa14 (ENSNBRG00000013256) zgc:114119 (ENSNBRG00000013239) Nile tilapia MODERN SPECIES 13 ENSONIG00000039124 ENSONIG00000032030 oscp1a (ENSONIG00000013682) LSM10 (ENSONIG00000020904) eva1bb (ENSONIG00000013681) thrap3b (ENSONIG00000013673) map7d1b (ENSONIG00000013670) stpg1 (ENSONIG00000013668) meaf6 (ENSONIG00000013665) fhl3b (ENSONIG00000016304) rragcb (ENSONIG00000013658) ppt1 (ENSONIG00000013654) cap1 (ENSONIG00000013650) KIAA0319L (ENSONIG00000013646) NCDN (ENSONIG00000013638) tfap2e (ENSONIG00000013632) ##21 psmb2 (ENSONIG00000013628) cdca5 (ENSONIG00000013627) ENSONIG00000032443 CLSPN (ENSONIG00000013618) ago4 (ENSONIG00000013603) ENSONIG00000020903 c19h1orf109 (ENSONIG00000041795) cdca8 (ENSONIG00000032157) ENSONIG00000013593 ENSONIG00000013586 ENSONIG00000013583 ENSONIG00000013581 anxa14 (ENSONIG00000013566) zgc:114119 (ENSONIG00000013563) ENSONIG00000013556 Midas cichlid MODERN SPECIES 1145 ENSACIG00000015467 ENSACIG00000015456 oscp1a (ENSACIG00000015426) LSM10 (ENSACIG00000015420) eva1bb (ENSACIG00000015385) thrap3b (ENSACIG00000015331) map7d1b (ENSACIG00000015299) stpg1 (ENSACIG00000015255) meaf6 (ENSACIG00000015202) fhl3b (ENSACIG00000015186) rragcb (ENSACIG00000015168) ppt1 (ENSACIG00000015133) cap1 (ENSACIG00000015108) KIAA0319L (ENSACIG00000015054) ENSACIG00000015036 tfap2e (ENSACIG00000015015) ##21 psmb2 (ENSACIG00000014995) cdca5 (ENSACIG00000014987) ENSACIG00000014975 CLSPN (ENSACIG00000014619) ENSACIG00000014590 ago4 (ENSACIG00000014548) ENSACIG00000014536 c19h1orf109 (ENSACIG00000014525) cdca8 (ENSACIG00000014512) ENSACIG00000014482 ENSACIG00000014456 ENSACIG00000014426 ENSACIG00000014370 anxa14 (ENSACIG00000014348) zgc:114119 (ENSACIG00000014339) Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 139 ENSGMOG00000033529 ##21 ENSGMOG00000032267 ##21 Cod MODERN SPECIES 139 ENSGMOG00000032267 ##21 ENSGMOG00000033529 ##21 Cod MODERN SPECIES 14 eva1bb (ENSGMOG00000017569) thrap3b (ENSGMOG00000023763) ENSGMOG00000001665 map7d1b (ENSGMOG00000022540) stpg1 (ENSGMOG00000024695) meaf6 (ENSGMOG00000007357) fhl3b (ENSGMOG00000033464) rragcb (ENSGMOG00000015890) ENSGMOG00000015901 ENSGMOG00000015918 ENSGMOG00000035476 ENSGMOG00000024806 ENSGMOG00000029342 KIAA0319L (ENSGMOG00000012803) NCDN (ENSGMOG00000022584) TFAP2E (ENSGMOG00000009513) ##21 psmb2 (ENSGMOG00000028958) ENSGMOG00000009525 ENSGMOG00000037177 CLSPN (ENSGMOG00000032830) ago4 (ENSGMOG00000009544) ENSGMOG00000031666 ENSGMOG00000009561 cdca8 (ENSGMOG00000009567) ENSGMOG00000022403 ENSGMOG00000024846 ENSGMOG00000005873 anxa14 (ENSGMOG00000015108) ENSGMOG00000031797 ENSGMOG00000036860 ENSGMOG00000016558 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000158451 ENSGT00940000154576 ENSGT00940000166582 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741.a.b.a ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01030000234542.b.a.a.a.a.h ENSGT01100000264503 ENSGT00390000010887.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 478 ENSGT00940000156197.ib ENSGT00490000043398.f ENSGT00390000002428.a.d ENSGT00940000166197.e ENSGT00910000144211.a ENSGT01050000244827.E.v.a ENSGT00940000162741.a.b.b ENSGT00940000162741.a.a ENSGT00940000166232.h ENSGT00940000156790.kb ENSGT00390000017955.c.wb ENSGT00940000157613.n ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.e ##21 ENSGT00640000091536.q ENSGT00980000199207.f ENSGT00390000012738.v ENSGT00940000158729.v ENSGT00940000163648.b.g ENSGT00390000008551.c ENSGT00390000011115.d ENSGT00940000164552.l.a Huchen MODERN SPECIES 1189 eloa (ENSHHUG00000021613) ENSHHUG00000021620 rpl11 (ENSHHUG00000021625) ENSHHUG00000021748 eef1a1l1 (ENSHHUG00000021754) eef1a1l1 (ENSHHUG00000022067) ENSHHUG00000022075 ppt1 (ENSHHUG00000022088) cap1 (ENSHHUG00000022171) KIAA0319L (ENSHHUG00000022365) NCDN (ENSHHUG00000022420) tfap2e (ENSHHUG00000022426) ##21 psmb2 (ENSHHUG00000022434) CLSPN (ENSHHUG00000022477) ago4 (ENSHHUG00000022521) ENSHHUG00000022661 c19h1orf109 (ENSHHUG00000022665) cdca8 (ENSHHUG00000022670) ENSHHUG00000022686 ENSHHUG00000022694 Salmoninae_a ANCESTRAL SPECIES 48 ENSGT00940000156221.s ENSGT00940000156197.ib ENSGT00490000043398.f ENSGT00390000002428.a.d ENSGT00940000166197.e ENSGT00910000144211.a ENSGT01050000244827.E.v.a ENSGT00940000162741.a.b.b ENSGT00940000171801 ENSGT00940000162741.a.a ENSGT00940000166232.h ENSGT00940000156790.kb ENSGT00390000017955.c.wb ENSGT00940000157613.n ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.e ##21 ENSGT00640000091536.q ENSGT00980000199207.f ENSGT00390000012738.v ENSGT00940000158729.v ENSGT00940000163648.b.g ENSGT00390000008551.c ENSGT00390000011115.d ENSGT00940000164552.l.a ENSGT00530000063426.b.a.c ENSGT00940000154798.b.a ENSGT00940000157740.c.b ENSGT00390000010887.b.h ENSGT00940000163960.a.d ENSGT00390000016823.m ENSGT01060000250499 Oncorhynchus ANCESTRAL SPECIES 40 ENSGT00940000166582.d ENSGT00940000156221.s ENSGT00940000156197.ib ENSGT00490000043398.f ENSGT00390000002428.a.d ENSGT00940000166197.e ENSGT00910000144211.a ENSGT01050000244827.E.v.a ENSGT00940000162741.a.b.b ENSGT00940000162741.a.a ENSGT00940000166232.h ENSGT00940000156790.kb ENSGT00390000017955.c.wb ENSGT00940000157613.n ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.e ##21 ENSGT00640000091536.q ENSGT00980000199207.f ENSGT00390000012738.v ENSGT00940000158729.v ENSGT00940000163648.b.g ENSGT00390000008551.c ENSGT00390000011115.d ENSGT00940000164552.l.a ENSGT00530000063426.b.a.c ENSGT00940000154798.b.a ENSGT00940000157740.c.b ENSGT01060000253693 ENSGT01100000263510.B.b.d ENSGT00390000010887.b.h ENSGT00940000163960.a.d Oncorhynchus_a ANCESTRAL SPECIES 45 ENSGT00940000166582.d ENSGT00940000156221.s ENSGT00940000156197.ib ENSGT00490000043398.f ENSGT00390000002428.a.d ENSGT00940000166197.e ENSGT00910000144211.a ENSGT01050000244827.E.v.a ENSGT00940000162741.a.b.b ENSGT00940000162741.a.a ENSGT00940000166232.h ENSGT00940000156790.kb ENSGT00390000017955.c.wb ENSGT00940000157613.n ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.e ##21 ENSGT00640000091536.q ENSGT00980000199207.f ENSGT00390000012738.v ENSGT00940000158729.v ENSGT00940000163648.b.g ENSGT00390000008551.c ENSGT00390000011115.d ENSGT00940000164552.l.a ENSGT00530000063426.b.a.c ENSGT00940000154798.b.a ENSGT00940000157740.c.b ENSGT01060000253693 ENSGT01100000263510.B.b.d ENSGT00390000010887.b.h ENSGT00940000163960.a.d Coho salmon MODERN SPECIES 5 ENSOKIG00005010958 ENSOKIG00005010891 lypla2 (ENSOKIG00005017065) pithd1 (ENSOKIG00005017029) eloa (ENSOKIG00005017004) ENSOKIG00005016985 rpl11 (ENSOKIG00005016939) ENSOKIG00005016927 ENSOKIG00005016848 ENSOKIG00005016821 ENSOKIG00005016775 ppt1 (ENSOKIG00005016320) cap1 (ENSOKIG00005016146) KIAA0319L (ENSOKIG00005015657) NCDN (ENSOKIG00005015636) tfap2e (ENSOKIG00005015615) ##21 psmb2 (ENSOKIG00005015590) ENSOKIG00005015583 CLSPN (ENSOKIG00005015558) ago4 (ENSOKIG00005014889) ENSOKIG00005014843 c19h1orf109 (ENSOKIG00005014832) cdca8 (ENSOKIG00005014820) ENSOKIG00005014816 ARHGDIA (ENSOKIG00005014810) ENSOKIG00005014784 ENSOKIG00005014435 ENSOKIG00005014382 ENSOKIG00005014327 ENSOKIG00005014308 ENSOKIG00005014305 Chinook salmon MODERN SPECIES 24 sfpq (ENSOTSG00005029377) lypla2 (ENSOTSG00005029380) pithd1 (ENSOTSG00005029381) eloa (ENSOTSG00005029382) ENSOTSG00005029383 rpl11 (ENSOTSG00005029385) ENSOTSG00005029387 eef1a1l1 (ENSOTSG00005029389) eef1a1l1 (ENSOTSG00005029454) ENSOTSG00005029492 ENSOTSG00005029494 ppt1 (ENSOTSG00005029495) cap1 (ENSOTSG00005029506) KIAA0319L (ENSOTSG00005030082) NCDN (ENSOTSG00005030332) tfap2e (ENSOTSG00005030334) ##21 psmb2 (ENSOTSG00005030335) ENSOTSG00005030340 CLSPN (ENSOTSG00005030341) ago4 (ENSOTSG00005030373) ENSOTSG00005033299 c19h1orf109 (ENSOTSG00005033307) cdca8 (ENSOTSG00005027922) ENSOTSG00005027923 ENSOTSG00005027931 ENSOTSG00005029738 ENSOTSG00005029739 ENSOTSG00005029740 zgc:114119 (ENSOTSG00005029741) ENSOTSG00005029742 tpmt.1 (ENSOTSG00005029765) Rainbow trout MODERN SPECIES 24 ENSOMYG00000037994 ENSOMYG00000038129 lypla2 (ENSOMYG00000038159) pithd1 (ENSOMYG00000038179) eloa (ENSOMYG00000038203) ENSOMYG00000038220 rpl11 (ENSOMYG00000038244) ENSOMYG00000072782 ENSOMYG00000038328 ENSOMYG00000063743 ENSOMYG00000051344 ppt1 (ENSOMYG00000038515) cap1 (ENSOMYG00000038787) KIAA0319L (ENSOMYG00000039614) NCDN (ENSOMYG00000040331) TFAP2E (ENSOMYG00000040338) ##21 psmb2 (ENSOMYG00000040345) ENSOMYG00000051165 CLSPN (ENSOMYG00000040361) ago4 (ENSOMYG00000040454) ENSOMYG00000040485 ENSOMYG00000040490 cdca8 (ENSOMYG00000040505) ENSOMYG00000052944 ENSOMYG00000040704 ENSOMYG00000058047 ENSOMYG00000040860 ENSOMYG00000075479 ENSOMYG00000053556 ENSOMYG00000058029 ENSOMYG00000009165 Salmo ANCESTRAL SPECIES 2 ENSGT00940000156221.s.a ENSGT00940000156197.ib ENSGT00490000043398.f ENSGT00390000002428.a.d ENSGT00940000166197.e ENSGT00910000144211.a ENSGT01050000244827.E.v.a ENSGT00940000162741.a.b.b ENSGT00940000171801 ENSGT00940000162741.a.a ENSGT00940000166232.h ENSGT00940000156790.kb ENSGT00390000017955.c.wb ENSGT00940000157613.n ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.e ##21 ENSGT00640000091536.q ENSGT00980000199207.f ENSGT00390000012738.v ENSGT00940000158729.v ENSGT00940000163648.b.g ENSGT00390000008551.c ENSGT00390000011115.d ENSGT00940000164552.l.a ENSGT00530000063426.b.a.c ENSGT00940000154798.b.a ENSGT00940000157740.c.b ENSGT00390000010887.b.h ENSGT00940000163960.a.d ENSGT00390000016823.m ENSGT01060000250499 River trout MODERN SPECIES 29 bmp8a (ENSSTUG00000032482) ENSSTUG00000032592 sfpq (ENSSTUG00000033012) lypla2 (ENSSTUG00000033052) pithd1 (ENSSTUG00000033068) eloa (ENSSTUG00000033087) ENSSTUG00000033112 rpl11 (ENSSTUG00000033117) ENSSTUG00000033148 eef1a1l1 (ENSSTUG00000033175) ENSSTUG00000033279 ppt1 (ENSSTUG00000033301) cap1 (ENSSTUG00000033372) KIAA0319L (ENSSTUG00000033808) NCDN (ENSSTUG00000034918) tfap2e (ENSSTUG00000034939) ##21 psmb2 (ENSSTUG00000034970) ENSSTUG00000034985 CLSPN (ENSSTUG00000034997) ago4 (ENSSTUG00000035051) ENSSTUG00000035805 c19h1orf109 (ENSSTUG00000035809) cdca8 (ENSSTUG00000035826) ENSSTUG00000022654 ENSSTUG00000022730 ENSSTUG00000023415 ENSSTUG00000023482 ENSSTUG00000023566 ENSSTUG00000023614 tpmt.1 (ENSSTUG00000023649) ENSSTUG00000023692 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000063173 ENSSSAG00000116825 ENSSSAG00000121603 lypla2 (ENSSSAG00000063086) eloa (ENSSSAG00000063050) ENSSSAG00000078869 rpl11 (ENSSSAG00000063001) ENSSSAG00000062987 ef1a (ENSSSAG00000062937) ENSSSAG00000107075 ENSSSAG00000077892 ENSSSAG00000062924 ppt1 (ENSSSAG00000062822) kiaa0319l (ENSSSAG00000054316) ncdn (ENSSSAG00000054225) TFAP2E (ENSSSAG00000087066) ##21 PSB2 (ENSSSAG00000054211) ENSSSAG00000117752 CLSPN (ENSSSAG00000054174) ago4 (ENSSSAG00000041281) ENSSSAG00000103935 ENSSSAG00000121151 c19h1orf109 (ENSSSAG00000041028) cdca8 (ENSSSAG00000040950) ENSSSAG00000040654 ENSSSAG00000039726 ppce (ENSSSAG00000039916) ENSSSAG00000039591 ENSSSAG00000039466 ext1c (ENSSSAG00000039391) TPMT (ENSSSAG00000039293) Salmoninae ANCESTRAL SPECIES 284 ENSGT00940000158451.f ENSGT00940000154576.fb.a ENSGT00940000166582.c ENSGT00940000156221.t ENSGT00940000156197.hb ENSGT00490000043398.e ENSGT00390000002428.a.c ENSGT00940000166197.f ENSGT00910000144211.b ENSGT01050000244827.E.v.b ENSGT00940000162741.a.b.a ENSGT00940000166232.g ENSGT00940000156790.jb ENSGT00390000017955.c.vb ENSGT00940000157613.m ENSGT00950000182848.c.b.b.a.f ##21 ENSGT00640000091536.r ENSGT00980000199207.e ENSGT00390000012738.u ENSGT00940000158729.u ENSGT00940000163648.b.h ENSGT00390000008551.d ENSGT00390000011115.c ENSGT00940000164552.l.b ENSGT00530000063426.b.a.d ENSGT00940000154798.b.b ENSGT00940000157740.c.a ENSGT00940000166692.h ENSGT01100000264503 ENSGT00390000010887.b.g ENSGT00940000163960.a.c Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000158451.f ENSGT00940000154576.fb.a ENSGT00940000166582.c ENSGT00940000156221.t ENSGT00940000156197.hb ENSGT00490000043398.e ENSGT00390000002428.a.c ENSGT00940000166197.f ENSGT00910000144211.b ENSGT01050000244827.E.v.b ENSGT00940000162741.a.b.a ENSGT00940000166232.g ENSGT00940000156790.jb ENSGT00390000017955.c.vb ENSGT00940000157613.m ENSGT00950000182848.c.b.b.a.f ##21 ENSGT00640000091536.r ENSGT00980000199207.e ENSGT00390000012738.u ENSGT00940000158729.u ENSGT00940000163648.b.h ENSGT00390000008551.d ENSGT00390000011115.c ENSGT00940000164552.l.b ENSGT00530000063426.b.a.d ENSGT00940000154798.b.b ENSGT00940000157740.c.a ENSGT00940000166692.h ENSGT01100000264503.b ENSGT00390000010887.b.g ENSGT00940000163960.a.c Salmo ANCESTRAL SPECIES 40 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b.d ENSGT00940000166582.c ENSGT00940000156221.t ENSGT00940000156197.hb ENSGT00490000043398.e ENSGT00390000002428.a.c ENSGT00940000166197.f ENSGT00910000144211.b ENSGT01050000244827.E.v.b ENSGT00940000162741.a.b.a ENSGT00940000166232.g ENSGT00940000156790.jb ENSGT00390000017955.c.vb ENSGT00940000157613.m ENSGT00950000182848.c.b.b.a.f ##21 ENSGT00640000091536.r ENSGT00980000199207.e ENSGT00390000012738.u ENSGT00940000158729.u ENSGT00940000163648.b.h ENSGT00390000008551.d ENSGT00390000011115.c ENSGT00940000164552.l.b ENSGT00530000063426.b.a.d ENSGT00940000154798.b.b ENSGT00940000157740.c.a ENSGT00940000166692.h ENSGT00390000010887.b.g ENSGT00940000163960.a.c ENSGT01100000263476.C.b.b.a.a.a.b.b.b.a.b River trout MODERN SPECIES 27 illr4 (ENSSTUG00000045764) ENSSTUG00000045723 ENSSTUG00000045742 ENSSTUG00000045712 sfpq (ENSSTUG00000045688) lypla2 (ENSSTUG00000045592) pithd1 (ENSSTUG00000045576) eloa (ENSSTUG00000045554) ENSSTUG00000045546 rpl11 (ENSSTUG00000045518) eef1a1l1 (ENSSTUG00000045438) ENSSTUG00000045403 ppt1 (ENSSTUG00000045305) cap1 (ENSSTUG00000045016) KIAA0319L (ENSSTUG00000044284) tfap2e (ENSSTUG00000044254) ##21 psmb2 (ENSSTUG00000044237) ENSSTUG00000044235 CLSPN (ENSSTUG00000044221) ago4 (ENSSTUG00000043607) ENSSTUG00000043549 ENSSTUG00000043535 cdca8 (ENSSTUG00000043502) ENSSTUG00000043462 ENSSTUG00000042669 ENSSTUG00000042439 ENSSTUG00000042327 anxa14 (ENSSTUG00000042285) zgc:114119 (ENSSTUG00000042239) ENSSTUG00000042192 ENSSTUG00000042152 Atlantic salmon MODERN SPECIES 19 illr4 (ENSSSAG00000078920) illr4 (ENSSSAG00000086924) ENSSSAG00000102468 ENSSSAG00000078909 sfpq (ENSSSAG00000078900) lypla2 (ENSSSAG00000078884) eloa (ENSSSAG00000078873) ENSSSAG00000063037 rpl11 (ENSSSAG00000078865) ENSSSAG00000112829 EF1A (ENSSSAG00000078842) ENSSSAG00000078824 ppt1 (ENSSSAG00000078788) cap1 (ENSSSAG00000078634) KIAA0319L (ENSSSAG00000078564) TFAP2E (ENSSSAG00000078555) ##21 PSB2 (ENSSSAG00000078549) ENSSSAG00000054202 CLSPN (ENSSSAG00000078544) ENSSSAG00000108325 ago4 (ENSSSAG00000078328) ENSSSAG00000084511 ENSSSAG00000078304 cdca8 (ENSSSAG00000078302) ENSSSAG00000078291 ENSSSAG00000077774 ENSSSAG00000077720 ENSSSAG00000077697 anxa14 (ENSSSAG00000077690) ENSSSAG00000117247 ENSSSAG00000077621 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000154576.fb.a ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00940000166582.c ENSGT00940000156221.t ENSGT00940000156197.hb ENSGT00490000043398.e ENSGT00390000002428.a.c ENSGT00940000166197.f ENSGT00910000144211.b ENSGT01050000244827.E.v.b ENSGT00940000162741.a.b.a ENSGT00940000166232.g ENSGT00940000156790.jb ENSGT00390000017955.c.vb ENSGT00940000157613.m ENSGT00950000182848.c.b.b.a.f ##21 ENSGT00640000091536.r ENSGT00980000199207.e ENSGT00390000012738.u ENSGT00940000158729.u ENSGT00940000163648.b.h ENSGT01000000220389 ENSGT00390000011115.c ENSGT00940000164552.l.b ENSGT00530000063426.b.a.d ENSGT00940000154798.b.b ENSGT00940000157740.c.a ENSGT00940000166692.h ENSGT01100000264503.b ENSGT00390000010887.b.g ENSGT00940000163960.a.c Rainbow trout MODERN SPECIES 9 ENSOMYG00000039651 ENSOMYG00000039627 ENSOMYG00000039146 lypla2 (ENSOMYG00000039558) pithd1 (ENSOMYG00000039482) eloa (ENSOMYG00000039444) ENSOMYG00000039403 rl11 (ENSOMYG00000039361) ENSOMYG00000039329 ENSOMYG00000039261 ENSOMYG00000038410 ppt1 (ENSOMYG00000038319) cap1 (ENSOMYG00000038600) ENSOMYG00000051540 KIAA0319L (ENSOMYG00000037509) TFAP2E (ENSOMYG00000037371) ##21 psb2 (ENSOMYG00000037332) ENSOMYG00000068973 CLSPN (ENSOMYG00000037296) AGO4 (ENSOMYG00000034805) ENSOMYG00000034614 ENSOMYG00000034608 ENSOMYG00000034594 ENSOMYG00000077820 ENSOMYG00000034576 ENSOMYG00000055018 ENSOMYG00000053858 ENSOMYG00000034550 ENSOMYG00000064223 ENSOMYG00000034513 anxa14 (ENSOMYG00000034463) Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000154576.fb.a ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00940000166582.c ENSGT00940000156221.t ENSGT00940000156197.hb ENSGT00490000043398.e ENSGT00390000002428.a.c ENSGT00940000166197.f ENSGT00910000144211.b ENSGT01050000244827.E.v.b ENSGT00940000162741.a.b.a ENSGT00940000166232.g ENSGT00940000156790.jb ENSGT00390000017955.c.vb ENSGT00940000157613.m ENSGT00950000182848.c.b.b.a.f ##21 ENSGT00640000091536.r ENSGT00390000012738.u ENSGT00940000158729.u ENSGT00940000163648.b.h ENSGT01000000220389 ENSGT00390000011115.c ENSGT00940000164552.l.b ENSGT00530000063426.b.a.d ENSGT00940000154798.b.b ENSGT00940000157740.c.a ENSGT00940000166692.h ENSGT00390000010887.b.g ENSGT00940000163960.a.c ENSGT01100000263476.C.b.b.a.a.a.b.b.b.a.b ENSGT00390000012412 Coho salmon MODERN SPECIES 8 ak2 (ENSOKIG00005048115) illr4 (ENSOKIG00005048131) ENSOKIG00005048145 ENSOKIG00005048161 sfpq (ENSOKIG00005048176) lypla2 (ENSOKIG00005048191) pithd1 (ENSOKIG00005048215) eloa (ENSOKIG00005048221) ENSOKIG00005048231 rpl11 (ENSOKIG00005048241) ENSOKIG00005048270 eef1a1l1 (ENSOKIG00005048282) ENSOKIG00005048316 ppt1 (ENSOKIG00005048333) KIAA0319L (ENSOKIG00005048355) TFAP2E (ENSOKIG00005048668) ##21 CLSPN (ENSOKIG00005048701) ENSOKIG00005048721 AGO4 (ENSOKIG00005048738) ENSOKIG00005048829 ENSOKIG00005048838 cdca8 (ENSOKIG00005048853) ENSOKIG00005048858 ENSOKIG00005048863 ENSOKIG00005048867 ENSOKIG00005048876 ENSOKIG00005048899 ENSOKIG00005048935 ENSOKIG00005048952 anxa14 (ENSOKIG00005048958) zgc:114119 (ENSOKIG00005048965) Chinook salmon MODERN SPECIES 4 ENSOTSG00005008713 sfpq (ENSOTSG00005008716) lypla2 (ENSOTSG00005008718) pithd1 (ENSOTSG00005008736) eloa (ENSOTSG00005008737) ENSOTSG00005008738 rpl11 (ENSOTSG00005008752) ENSOTSG00005008756 eef1a1l1 (ENSOTSG00005008757) eef1a1l1 (ENSOTSG00005008758) ENSOTSG00005008759 ppt1 (ENSOTSG00005008837) cap1 (ENSOTSG00005008865) KIAA0319L (ENSOTSG00005009241) ENSOTSG00005010115 tfap2e (ENSOTSG00005010116) ##21 psmb2 (ENSOTSG00005010117) CLSPN (ENSOTSG00005010118) ago4 (ENSOTSG00005010121) ENSOTSG00005010128 ENSOTSG00005010130 cdca8 (ENSOTSG00005010131) ENSOTSG00005010134 ENSOTSG00005010145 ENSOTSG00005010146 ENSOTSG00005010150 anxa14 (ENSOTSG00005010152) zgc:114119 (ENSOTSG00005010153) ENSOTSG00005010154 ENSOTSG00005010156 ENSOTSG00005010157 Otomorpha ANCESTRAL SPECIES 96 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000166582 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT01050000244827.E ENSGT00950000183029.B.j.g.b ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00390000016823 Otophysi ANCESTRAL SPECIES 39 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000012412 ENSGT00390000016823 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT01030000234542.b.a.a.a.b ENSGT00940000154107.b ENSGT00390000007888 Characiphysae ANCESTRAL SPECIES 10 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000155641.g.a ENSGT00940000156498.g.a ENSGT00940000153469.a.a.k ENSGT00950000182803.A.a.a ENSGT00940000157932.n ENSGT00940000156254.o.b ENSGT00940000157239 ENSGT00940000160079 Channel catfish MODERN SPECIES 16 mapk15 (ENSIPUG00000014928) GRINA (ENSIPUG00000014961) Rprd1a (ENSIPUG00000014993) slc30a8 (ENSIPUG00000015011) med30 (ENSIPUG00000015040) extl1 (ENSIPUG00000015076) SAMD12 (ENSIPUG00000015123) abrab (ENSIPUG00000015143) angpt1 (ENSIPUG00000015155) sdc2 (ENSIPUG00000015186) ppp1r36 (ENSIPUG00000015238) tpmt (ENSIPUG00000015258) ext1c (ENSIPUG00000015279) zgc:114119 (ENSIPUG00000015310) ncdn (ENSIPUG00000015333) tfap2e (ENSIPUG00000015384) ##21 psmb2 (ENSIPUG00000015409) ENSIPUG00000015455 CLSPN (ENSIPUG00000015466) ago4 (ENSIPUG00000015600) c19h1orf109 (ENSIPUG00000015695) ENSIPUG00000015720 cdca8 (ENSIPUG00000015734) rhot1a (ENSIPUG00000015807) Adap2 (ENSIPUG00000015985) atad5 (ENSIPUG00000016010) prpsap2 (ENSIPUG00000016035) ENSIPUG00000016060 grapa (ENSIPUG00000016070) epn2 (ENSIPUG00000016083) b9d1 (ENSIPUG00000016116) Characiphysae_b ANCESTRAL SPECIES 1 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000155641.g.a ENSGT00940000156498.g.a ENSGT00940000153469.a.a.k ENSGT00950000182803.A.a.a ENSGT00940000157932.n ENSGT00940000156254.o.b ENSGT00940000157239 ENSGT00940000160079 Electric eel MODERN SPECIES 413 NCDN (ENSEEEG00000007567) tfap2e (ENSEEEG00000007566) ##21 psmb2 (ENSEEEG00000007564) CLSPN (ENSEEEG00000007558) ago4 (ENSEEEG00000006078) ENSEEEG00000005922 c19h1orf109 (ENSEEEG00000005918) cdca8 (ENSEEEG00000005916) rhot1a (ENSEEEG00000005837) ENSEEEG00000005823 ENSEEEG00000005820 prpsap2 (ENSEEEG00000005604) ENSEEEG00000005567 grapa (ENSEEEG00000005563) EPN2 (ENSEEEG00000005562) b9d1 (ENSEEEG00000005553) ENSEEEG00000005500 Characoidei ANCESTRAL SPECIES 3 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000155641.g.a ENSGT00940000156498.g.a ENSGT00940000153469.a.a.k ENSGT00950000182803.A.a.a ENSGT00940000157932.n ENSGT00940000156254.o.b ENSGT00940000157239 ENSGT00940000160079 Red-bellied piranha MODERN SPECIES 89 RPRD1A (ENSPNAG00000024553) SLC30A8 (ENSPNAG00000024523) med30 (ENSPNAG00000024486) ext1b (ENSPNAG00000024449) SAMD12 (ENSPNAG00000024373) abrab (ENSPNAG00000024344) angpt1 (ENSPNAG00000024316) sdc2 (ENSPNAG00000024273) ENSPNAG00000024250 tpmt.1 (ENSPNAG00000024235) ENSPNAG00000005416 zgc:114119 (ENSPNAG00000024129) NCDN (ENSPNAG00000024122) tfap2e (ENSPNAG00000024083) ##21 psmb2 (ENSPNAG00000024066) ENSPNAG00000024044 CLSPN (ENSPNAG00000024028) ago4 (ENSPNAG00000005191) ENSPNAG00000023939 c19h1orf109 (ENSPNAG00000023926) cdca8 (ENSPNAG00000003799) rhot1a (ENSPNAG00000023823) ADAP2 (ENSPNAG00000023715) ENSPNAG00000023671 prpsap2 (ENSPNAG00000023642) FAM83G (ENSPNAG00000023587) grapa (ENSPNAG00000023560) EPN2 (ENSPNAG00000023553) b9d1 (ENSPNAG00000023505) Mexicana tetra MODERN SPECIES 15 grinaa (ENSAMXG00000040446) RPRD1A (ENSAMXG00000038604) SLC30A8 (ENSAMXG00000021151) med30 (ENSAMXG00000021203) ext1b (ENSAMXG00000021176) SAMD12 (ENSAMXG00000021211) abrab (ENSAMXG00000029693) angpt1 (ENSAMXG00000031959) ENSAMXG00000037714 sdc2 (ENSAMXG00000032522) ENSAMXG00000029087 tpmt.1 (ENSAMXG00000029872) ENSAMXG00000010369 zgc:114119 (ENSAMXG00000010358) NCDN (ENSAMXG00000010355) tfap2e (ENSAMXG00000031505) ##21 psmb2 (ENSAMXG00000010339) ENSAMXG00000033121 CLSPN (ENSAMXG00000010325) ago4 (ENSAMXG00000010318) ENSAMXG00000025545 c19h1orf109 (ENSAMXG00000010315) cdca8 (ENSAMXG00000010313) rhot1a (ENSAMXG00000034712) ENSAMXG00000042862 ENSAMXG00000010305 prpsap2 (ENSAMXG00000010303) ENSAMXG00000032953 grapa (ENSAMXG00000039241) EPN2 (ENSAMXG00000038412) b9d1 (ENSAMXG00000043369) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758.c ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984.l.a ENSGT00940000158117 ENSGT00390000016823 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00940000154107.b ENSGT00390000007888 ENSGT00940000170137 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 75 ENSGT00940000155321.e.a.b ENSGT00390000008161.a.b.f ENSGT00390000015984.l.b ENSGT00940000158117.m.a.a ENSGT00940000160706.d ENSGT00390000010887.a.g ENSGT00940000155321.e.a.a ENSGT00390000008161.a.b.e ENSGT00390000015984.l.a ENSGT00940000158117.m.b ENSGT00940000157222.a.k.a ENSGT00390000016823.b ENSGT00940000163960.a.b ENSGT00390000010887.b.i.b ENSGT00390000013601.c ENSGT00950000182848.c.b.b.a.g ##21 ENSGT00640000091536.w ENSGT00980000199207 ENSGT00390000012738.q ENSGT00940000158729.x ENSGT00940000163648.b.b.b.a ENSGT00390000008551.b.a ENSGT00390000011115.j ENSGT00940000164552.i ENSGT00530000063426.b.a.a ENSGT00940000154798.b.c ENSGT00940000157740.a ENSGT00940000166692.i ENSGT00940000154107.b.e.b ENSGT00390000007888.f ENSGT00390000016277.a.l Cyprininae_a ANCESTRAL SPECIES 1 ENSGT01010000223133 ENSGT00390000007486.b ENSGT00940000160706.d ENSGT00390000010887.a.g ENSGT00940000155321.e.b ENSGT00940000160706.c ENSGT00390000010887.a.h ENSGT00940000155321.e.a.a ENSGT00390000008161.a.b.e ENSGT00390000015984.l.a ENSGT00940000158117.m.b ENSGT00940000157222.a.k.a ENSGT00390000016823.b ENSGT00940000163960.a.b ENSGT00390000013601.c ENSGT00950000182848.c.b.b.a.g ##21 ENSGT00640000091536.w ENSGT00980000199207 ENSGT00390000012738.q ENSGT00940000158729.x ENSGT00940000163648.b.b.b.a ENSGT00390000008551.b.a ENSGT00390000011115.j ENSGT00940000164552.i ENSGT00530000063426.b.a.a ENSGT00940000154798.b.c ENSGT00940000157740.a ENSGT00940000166692.i ENSGT00390000007888.f ENSGT00940000154107.b.e.b ENSGT00390000016277.a.l Common carp reference MODERN SPECIES 12 cap2 (ENSCCRG00000063817) vps28 (ENSCCRG00000080410) mapk15 (ENSCCRG00000038223) grinaa (ENSCCRG00000038220) ENSCCRG00000038218 SLC30A8 (ENSCCRG00000038215) med30 (ENSCCRG00000038209) ext1b (ENSCCRG00000063101) SAMD12 (ENSCCRG00000081567) abrab (ENSCCRG00000082081) angpt1 (ENSCCRG00000038203) sdc2 (ENSCCRG00000057201) ENSCCRG00000026160 NCDN (ENSCCRG00000046085) zgc:114119 (ENSCCRG00000047195) TFAP2E (ENSCCRG00000065705) ##21 psmb2 (ENSCCRG00000064104) ENSCCRG00000011144 CLSPN (ENSCCRG00000064434) ago4 (ENSCCRG00000011172) ENSCCRG00000012929 ENSCCRG00000071530 cdca8 (ENSCCRG00000020256) ENSCCRG00000080683 ENSCCRG00000044026 ENSCCRG00000036732 ENSCCRG00000050162 anxa14 (ENSCCRG00000050159) sgo1 (ENSCCRG00000065522) rpl14 (ENSCCRG00000080531) ENSCCRG00000067846 Golden-line barbel MODERN SPECIES 148 mapk15 (ENSSGRG00000045280) grinaa (ENSSGRG00000045281) ENSSGRG00000045283 SLC30A8 (ENSSGRG00000045284) med30 (ENSSGRG00000045286) EXT1 (ENSSGRG00000045288) SAMD12 (ENSSGRG00000045289) abrab (ENSSGRG00000045291) angpt1 (ENSSGRG00000045292) sdc2 (ENSSGRG00000045294) ENSSGRG00000045295 ENSSGRG00000045298 ENSSGRG00000045314 ENSSGRG00000045335 NCDN (ENSSGRG00000045336) tfap2e (ENSSGRG00000045338) ##21 psmb2 (ENSSGRG00000045344) ENSSGRG00000045370 CLSPN (ENSSGRG00000045372) ago4 (ENSSGRG00000045488) c19h1orf109 (ENSSGRG00000048652) ENSSGRG00000048653 cdca8 (ENSSGRG00000048654) ENSSGRG00000048656 ENSSGRG00000048663 ENSSGRG00000048787 ENSSGRG00000048791 anxa14 (ENSSGRG00000048792) ENSSGRG00000048794 ENSSGRG00000048795 ABHD5 (ENSSGRG00000048796) Goldfish MODERN SPECIES 10 celf3a (ENSCARG00000014451) rprd2a (ENSCARG00000014486) ciarta (ENSCARG00000014494) mrps21 (ENSCARG00000014502) crabp2b (ENSCARG00000014510) scamp3 (ENSCARG00000014519) ash1l (ENSCARG00000014568) lrrc71 (ENSCARG00000015977) setdb1a (ENSCARG00000016001) clk2a (ENSCARG00000016064) si:ch211-81a5.8 (ENSCARG00000016067) ENSCARG00000016073 ndufv1 (ENSCARG00000016127) ENSCARG00000016612 NCDN (ENSCARG00000016735) tfap2e (ENSCARG00000016744) ##21 psmb2 (ENSCARG00000016760) ENSCARG00000016785 CLSPN (ENSCARG00000016789) ago4 (ENSCARG00000016810) ENSCARG00000016917 c19h1orf109 (ENSCARG00000016927) cdca8 (ENSCARG00000016931) ENSCARG00000016965 ENSCARG00000017161 ENSCARG00000017252 ENSCARG00000017297 anxa14 (ENSCARG00000017404) sgo1 (ENSCARG00000017420) rpl14 (ENSCARG00000017429) ABHD5 (ENSCARG00000017458) Cyprininae ANCESTRAL SPECIES 190 ENSGT00940000158117.m.a.b ENSGT00940000157222.a.k.b ENSGT00390000016823.a ENSGT00940000163960.a.a ENSGT00390000010887.b.i.a ENSGT00390000013601.d ENSGT00950000182848.c.b.b.a.h ##21 ENSGT00640000091536.x ENSGT00390000012738.r ENSGT00940000158729.w ENSGT00940000163648.b.b.b.b ENSGT00390000008551.b.b ENSGT00390000011115.i ENSGT00940000164552.j ENSGT00530000063426.b.a.b ENSGT00940000154798.b.d ENSGT00940000157740.b ENSGT00940000166692.j ENSGT00940000154107.b.f ENSGT00940000154107.b.e.a ENSGT00390000007888.e ENSGT01060000253381 Goldfish MODERN SPECIES 38 ENSCARG00000036207 grinaa (ENSCARG00000036281) ENSCARG00000036288 RPRD1A (ENSCARG00000036295) SLC30A8 (ENSCARG00000036309) med30 (ENSCARG00000036316) ext1b (ENSCARG00000036324) SAMD12 (ENSCARG00000036347) ABRA (ENSCARG00000036355) angpt1 (ENSCARG00000036369) sdc2 (ENSCARG00000036388) ENSCARG00000053409 ENSCARG00000053428 zgc:114119 (ENSCARG00000053457) NCDN (ENSCARG00000053480) tfap2e (ENSCARG00000053490) ##21 psmb2 (ENSCARG00000053520) ENSCARG00000053552 CLSPN (ENSCARG00000053586) ago4 (ENSCARG00000053620) ENSCARG00000053688 c19h1orf109 (ENSCARG00000053710) cdca8 (ENSCARG00000053798) ENSCARG00000053835 ENSCARG00000054042 ENSCARG00000054055 ENSCARG00000054147 ENSCARG00000054204 anxa14 (ENSCARG00000054309) sgo1 (ENSCARG00000054343) rpl14 (ENSCARG00000054351) Cyprininae_a ANCESTRAL SPECIES 191 ENSGT00940000155321.e.a.b ENSGT00390000008161.a.b.f ENSGT00390000015984.l.b ENSGT00940000158117.m.a.a ENSGT00940000157222.a.k.b ENSGT00390000016823.a ENSGT00940000163960.a.a ENSGT00390000010887.b.i.a ENSGT00390000013601.d ENSGT00950000182848.c.b.b.a.h ##21 ENSGT00640000091536.x ENSGT00390000012738.r ENSGT00940000158729.w ENSGT00940000163648.b.b.a ENSGT00390000008551.a ENSGT00940000163648.b.a ENSGT00390000008551.b.b ENSGT00390000011115.i ENSGT00940000164552.j ENSGT00530000063426.b.a.b ENSGT00940000154798.b.d ENSGT00940000157740.b ENSGT00940000166692.j ENSGT00940000154107.b.f ENSGT00940000154107.b.e.a Common carp reference MODERN SPECIES 31 vps28 (ENSCCRG00000037692) mapk15 (ENSCCRG00000046389) grinaa (ENSCCRG00000046384) ENSCCRG00000069743 SLC30A8 (ENSCCRG00000020519) med30 (ENSCCRG00000025951) ext1b (ENSCCRG00000005441) SAMD12 (ENSCCRG00000040022) ENSCCRG00000040028 angpt1 (ENSCCRG00000053660) sdc2 (ENSCCRG00000026164) ENSCCRG00000022073 ENSCCRG00000043189 zgc:114119 (ENSCCRG00000071732) NCDN (ENSCCRG00000043194) tfap2e (ENSCCRG00000047199) ##21 psmb2 (ENSCCRG00000047204) CLSPN (ENSCCRG00000038380) ago4 (ENSCCRG00000036021) ENSCCRG00000020266 ENSCCRG00000012931 cdca8 (ENSCCRG00000012935) ENSCCRG00000064711 ENSCCRG00000001647 ENSCCRG00000053475 ENSCCRG00000036722 ENSCCRG00000038237 ENSCCRG00000005910 sgo1 (ENSCCRG00000050149) rpl14 (ENSCCRG00000050127) ENSCCRG00000062525 Golden-line barbel MODERN SPECIES 160 vps28 (ENSSGRG00000032583) grinaa (ENSSGRG00000032608) ENSSGRG00000032614 ENSSGRG00000032616 SLC30A8 (ENSSGRG00000032619) med30 (ENSSGRG00000032629) ext1b (ENSSGRG00000032632) ENSSGRG00000032766 SAMD12 (ENSSGRG00000032767) angpt1 (ENSSGRG00000032772) sdc2 (ENSSGRG00000032821) ENSSGRG00000032822 ENSSGRG00000032823 zgc:114119 (ENSSGRG00000032867) NCDN (ENSSGRG00000032868) tfap2e (ENSSGRG00000032869) ##21 psmb2 (ENSSGRG00000032968) CLSPN (ENSSGRG00000032971) ago4 (ENSSGRG00000032982) ENSSGRG00000033253 c19h1orf109 (ENSSGRG00000033254) cdca8 (ENSSGRG00000033255) Zebrafish MODERN SPECIES 10 UBE2M (ENSDARG00000101521) ENSDARG00000098064 zgc:158376 (ENSDARG00000103362) ctnnb2 (ENSDARG00000023472) ago4 (ENSDARG00000100854) c19h1orf109 (ENSDARG00000012113) cdca8 (ENSDARG00000043137) ENSDARG00000075321 rrm2 (ENSDARG00000078069) ENSDARG00000076126 scg5 (ENSDARG00000077045) ENSDARG00000090720 ENSDARG00000102003 zgc:114119 (ENSDARG00000098992) NCDN (ENSDARG00000098544) tfap2e (ENSDARG00000008861) ##21 psmb2 (ENSDARG00000031511) ENSDARG00000035649 tpmt.2 (ENSDARG00000028012) tpmt.1 (ENSDARG00000055974) ENSDARG00000113081 sdc2 (ENSDARG00000002731) ENSDARG00000093422 ENSDARG00000100195 angpt1 (ENSDARG00000030364) abrab (ENSDARG00000033854) SAMD12 (ENSDARG00000115661) ext1b (ENSDARG00000101019) med30 (ENSDARG00000101115) SLC30A8 (ENSDARG00000100917) RPRD1A (ENSDARG00000104861) Clupeiformes ANCESTRAL SPECIES 250 ENSGT00940000154576 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000166582 ENSGT00940000156221 ENSGT00940000156197 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00940000156790 ENSGT00390000017955.c ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ##21 ENSGT00640000091536 ENSGT00980000199207 ENSGT00390000012738 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 12 ENSDCDG00000023951 ENSDCDG00000023965 ENSDCDG00000024010 ENSDCDG00000024013 ENSDCDG00000024025 ENSDCDG00000024027 ENSDCDG00000024034 ENSDCDG00000024045 ENSDCDG00000024048 ybx1 (ENSDCDG00000024051) ENSDCDG00000024052 ppt1 (ENSDCDG00000024058) cap1 (ENSDCDG00000024085) KIAA0319L (ENSDCDG00000024599) NCDN (ENSDCDG00000025814) tfap2e (ENSDCDG00000025820) ##21 psmb2 (ENSDCDG00000025825) ENSDCDG00000023755 ENSDCDG00000023758 ppp1r11 (ENSDCDG00000023759) vars2 (ENSDCDG00000023826) mgat1b (ENSDCDG00000028409) ddx39b (ENSDCDG00000028412) polr1h (ENSDCDG00000028448) gtf2h4 (ENSDCDG00000028453) SH3BP5L (ENSDCDG00000028681) ENSDCDG00000028683 GABBR1 (ENSDCDG00000028685) ENSDCDG00000028694 tnfa (ENSDCDG00000028695) sacm1la (ENSDCDG00000028712) Denticle herring MODERN SPECIES 22 ENSDCDG00000019613 ppt1 (ENSDCDG00000019335) cap1 (ENSDCDG00000019287) KIAA0319L (ENSDCDG00000018375) NCDN (ENSDCDG00000018357) tfap2e (ENSDCDG00000018346) ##21 psmb2 (ENSDCDG00000018338) ENSDCDG00000018334 ENSDCDG00000018330 ppp1r11 (ENSDCDG00000018321) vars2 (ENSDCDG00000008489) mgat1b (ENSDCDG00000007790) ddx39b (ENSDCDG00000007751) polr1h (ENSDCDG00000007747) gtf2h4 (ENSDCDG00000006429) SH3BP5L (ENSDCDG00000006173) ENSDCDG00000006134 Atlantic herring MODERN SPECIES 10 rnf19b (ENSCHAG00000016217) ENSCHAG00000016197 ENSCHAG00000015848 sfpq (ENSCHAG00000015820) lypla2 (ENSCHAG00000015735) pithd1 (ENSCHAG00000015692) eloa (ENSCHAG00000015663) ENSCHAG00000015654 rpl11 (ENSCHAG00000015580) eef1a1l1 (ENSCHAG00000015444) ENSCHAG00000015430 ppt1 (ENSCHAG00000015280) cap1 (ENSCHAG00000014608) KIAA0319L (ENSCHAG00000013267) NCDN (ENSCHAG00000013240) tfap2e (ENSCHAG00000013149) ##21 psmb2 (ENSCHAG00000013111) ENSCHAG00000013102 CLSPN (ENSCHAG00000012798) ENSCHAG00000012782 si:dkeyp-92c9.2 (ENSCHAG00000012772) myo1g (ENSCHAG00000012249) nup88 (ENSCHAG00000012022) ENSCHAG00000011971 si:ch211-195b13.1 (ENSCHAG00000010903) ENSCHAG00000010443 ENSCHAG00000010425 ENSCHAG00000010419 xkr8.3 (ENSCHAG00000010304) xkr8.3 (ENSCHAG00000010294) ENSCHAG00000010283 Spotted gar MODERN SPECIES 672 rnf19b (ENSLOCG00000001101) sfpq (ENSLOCG00000001067) lypla2 (ENSLOCG00000001047) pithd1 (ENSLOCG00000001023) eloa (ENSLOCG00000000997) ENSLOCG00000000972 rpl11 (ENSLOCG00000000953) ENSLOCG00000000926 ENSLOCG00000000907 ENSLOCG00000000882 ppt1 (ENSLOCG00000000848) cap1 (ENSLOCG00000000820) adprs (ENSLOCG00000000800) ENSLOCG00000000785 NCDN (ENSLOCG00000000757) tfap2e (ENSLOCG00000000725) ##21 psmb2 (ENSLOCG00000000700) C1orf216 (ENSLOCG00000000664) CLSPN (ENSLOCG00000000631) ago4 (ENSLOCG00000000584) ago1 (ENSLOCG00000000504) tekt2 (ENSLOCG00000000469) Reedfish MODERN SPECIES 5 sfpq (ENSECRG00000012100) lypla2 (ENSECRG00000012133) pithd1 (ENSECRG00000012150) eloa (ENSECRG00000012172) ENSECRG00000012190 rpl11 (ENSECRG00000012214) ENSECRG00000012251 eef1a1l1 (ENSECRG00000012293) ENSECRG00000012332 cap1 (ENSECRG00000012381) ppt1 (ENSECRG00000012428) cap1 (ENSECRG00000012448) adprs (ENSECRG00000012469) KIAA0319L (ENSECRG00000012492) NCDN (ENSECRG00000012527) tfap2e (ENSECRG00000012554) ##21 psmb2 (ENSECRG00000012592) C1orf216 (ENSECRG00000012605) CLSPN (ENSECRG00000012629) ago4 (ENSECRG00000012804) AGO1 (ENSECRG00000013213) ago3b (ENSECRG00000013697) bmp8a (ENSECRG00000015413) selenow2a (ENSECRG00000015452) erbb2 (ENSECRG00000015535) pgap3 (ENSECRG00000015644) PNMT (ENSECRG00000015719) tcap (ENSECRG00000015881) zgc:91968 (ENSECRG00000015917) stard3 (ENSECRG00000015977) ppp1r1b (ENSECRG00000016041) Elephant shark MODERN SPECIES 1712 hmgcl (ENSCMIG00000007040) pithd1 (ENSCMIG00000007037) lypla2 (ENSCMIG00000007036) gale (ENSCMIG00000007031) ELOA (ENSCMIG00000007026) ENSCMIG00000007023 ENSCMIG00000006936 ENSCMIG00000006892 ppt1 (ENSCMIG00000006835) cap1 (ENSCMIG00000006811) ENSCMIG00000006807 tekt2 (ENSCMIG00000006786) ago1 (ENSCMIG00000006640) ago4 (ENSCMIG00000006337) ENSCMIG00000006270 tfap2e (ENSCMIG00000006269) ##21 psmb2 (ENSCMIG00000006267) ENSCMIG00000006263