Mammalia	ANCESTRAL SPECIES	4	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a	ENSGT00940000155476	ENSGT00940000161910
Theria	ANCESTRAL SPECIES		ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a	ENSGT00940000155476	ENSGT00940000161910
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b	ENSGT00940000155476
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.a
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b
Primates	ANCESTRAL SPECIES	12	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294.a	ENSGT00900000143452	ENSGT00940000158294.b	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294.a	ENSGT00900000143452	ENSGT00940000158294.b	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Lemuriformes_a	ANCESTRAL SPECIES	94	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294.b	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a
Coquerels sifaka	MODERN SPECIES	593																GLI3 (ENSPCOG00000002002) #22	INHBA (ENSPCOG00000021472) #23	SUGCT (ENSPCOG00000023610) #24	MPLKIP (ENSPCOG00000007076) #25	CDK13 (ENSPCOG00000020869) #26	ENSPCOG00000028359 #27	RALA (ENSPCOG00000018071) #28	YAE1 (ENSPCOG00000012495) #29	POU6F2 (ENSPCOG00000022128) #30
Greater bamboo lemur	MODERN SPECIES	656											ENSPSMG00000016510	MRPL32 (ENSPSMG00000016540)	PSMA2 (ENSPSMG00000016578)	C7orf25 (ENSPSMG00000016596)	ENSPSMG00000016607	ENSPSMG00000016615 #22
Mouse lemur	MODERN SPECIES	2	AEBP1 (ENSMICG00000013400)	POLM (ENSMICG00000013358)	PGAM2 (ENSMICG00000013345)	DBNL (ENSMICG00000013311)	ENSMICG00000013289	URGCP (ENSMICG00000030783)	MRPS24 (ENSMICG00000043303)	BLVRA (ENSMICG00000007284)	COA1 (ENSMICG00000013834)	STK17A (ENSMICG00000047496)	ENSMICG00000047051	HECW1 (ENSMICG00000001053)	ENSMICG00000045915	PSMA2 (ENSMICG00000017286)	C7orf25 (ENSMICG00000017285)	GLI3 (ENSMICG00000010785) #22	INHBA (ENSMICG00000033429) #23	YAE1 (ENSMICG00000042079) #29	SUGCT (ENSMICG00000010769) #24	MPLKIP (ENSMICG00000037623) #25	CDK13 (ENSMICG00000044449) #26	RALA (ENSMICG00000038516) #28	ENSMICG00000012521	POU6F2 (ENSMICG00000007361) #30	VPS41 (ENSMICG00000005036)	AMPH (ENSMICG00000013941)	ENSMICG00000044287	ENSMICG00000029905	ENSMICG00000000945	EPDR1 (ENSMICG00000001946)	SFRP4 (ENSMICG00000026727)
Bushbaby	MODERN SPECIES	234	POLD2 (ENSOGAG00000006720)	AEBP1 (ENSOGAG00000007419)	POLM (ENSOGAG00000006715)	PGAM2 (ENSOGAG00000006713)	DBNL (ENSOGAG00000006706)	UBE2D4 (ENSOGAG00000004018)	URGCP (ENSOGAG00000001595)	MRPS24 (ENSOGAG00000001593)	BLVRA (ENSOGAG00000001591)	COA1 (ENSOGAG00000006944)	STK17A (ENSOGAG00000033031)	HECW1 (ENSOGAG00000013436)	MRPL32 (ENSOGAG00000016806)	PSMA2 (ENSOGAG00000016805)	C7orf25 (ENSOGAG00000016804)	GLI3 (ENSOGAG00000012651) #22	INHBA (ENSOGAG00000003846) #23	ENSOGAG00000025676	MPLKIP (ENSOGAG00000014138) #25	ENSOGAG00000010247 #26	RALA (ENSOGAG00000010244) #28	YAE1 (ENSOGAG00000010241) #29	ENSOGAG00000030149	POU6F2 (ENSOGAG00000033061) #30	VPS41 (ENSOGAG00000000684)	AMPH (ENSOGAG00000000682)
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.a
Tarsier	MODERN SPECIES	7035																GLI3 (ENSTSYG00000009406) #22
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.a.a
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179.m	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00530000063426.b.b.b	ENSGT00390000014996	ENSGT00550000074870.b.nc	ENSGT00390000014722.c	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00940000155959.m.a	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000153143.a.b.b.a.a.b
Cebidae	ANCESTRAL SPECIES	9	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179.m	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00910000144211.n.b	ENSGT00390000014996	ENSGT00550000074870.b.nc	ENSGT00390000014722.c	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00940000155959.m.a	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT01060000248976
Marmoset	MODERN SPECIES	20	ENSCJAG00000007934	PGAM2 (ENSCJAG00000007923)	ENSCJAG00000007899	URGCP (ENSCJAG00000007849)	ENSCJAG00000007842	BLVRA (ENSCJAG00000007829)	COA1 (ENSCJAG00000007826)	STK17A (ENSCJAG00000007799)	ENSCJAG00000078337	HECW1 (ENSCJAG00000007768)	ENSCJAG00000082260	ENSCJAG00000062733	MRPL32 (ENSCJAG00000007749)	PSMA2 (ENSCJAG00000039517)	C7orf25 (ENSCJAG00000007729)	GLI3 (ENSCJAG00000007690) #22	INHBA (ENSCJAG00000007682) #23	SUGCT (ENSCJAG00000007656) #24	MPLKIP (ENSCJAG00000007653) #25	CDK13 (ENSCJAG00000007641) #26	ENSCJAG00000077034	RALA (ENSCJAG00000039772) #28	YAE1 (ENSCJAG00000041871) #29	ENSCJAG00000074718	POU6F2 (ENSCJAG00000007618) #30	VPS41 (ENSCJAG00000012686)	ENSCJAG00000012684	ENSCJAG00000085472	AMPH (ENSCJAG00000012658)	ENSCJAG00000075352	TRGV9 (ENSCJAG00000044374)
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179.m	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00910000144211.n.b	ENSGT00390000014996	ENSGT00550000074870.b.nc	ENSGT00390000014722.c	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00940000155959.m.a	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT01060000248976	ENSGT00940000155476
Capuchin	MODERN SPECIES	509											ENSCCAG00000002920	MRPL32 (ENSCCAG00000021732)	PSMA2 (ENSCCAG00000029169)	ENSCCAG00000028803	ENSCCAG00000033306	GLI3 (ENSCCAG00000029874) #22	INHBA (ENSCCAG00000025175) #23
Bolivian squirrel monkey	MODERN SPECIES	82	POLM (ENSSBOG00000026333)	PGAM2 (ENSSBOG00000031111)	DBNL (ENSSBOG00000027972)	UBE2D4 (ENSSBOG00000034793)	URGCP (ENSSBOG00000020021)	ENSSBOG00000028274	BLVRA (ENSSBOG00000030897)	COA1 (ENSSBOG00000023098)	STK17A (ENSSBOG00000022665)	HECW1 (ENSSBOG00000022224)	ENSSBOG00000031237	ENSSBOG00000023091	MRPL32 (ENSSBOG00000029277)	PSMA2 (ENSSBOG00000019977)	ENSSBOG00000033820	GLI3 (ENSSBOG00000020504) #22	INHBA (ENSSBOG00000021061) #23	SUGCT (ENSSBOG00000030111) #24	MPLKIP (ENSSBOG00000003418) #25	ENSSBOG00000031315 #26	RALA (ENSSBOG00000021115) #28	ENSSBOG00000032600	YAE1 (ENSSBOG00000032607) #29	POU6F2 (ENSSBOG00000029519) #30	VPS41 (ENSSBOG00000033706)	ENSSBOG00000030272	AMPH (ENSSBOG00000026809)	ENSSBOG00000020164	ENSSBOG00000019808	ENSSBOG00000026023	ENSSBOG00000024726
Mas night monkey	MODERN SPECIES	1103								BLVRA (ENSANAG00000021982)	COA1 (ENSANAG00000038164)	STK17A (ENSANAG00000034563)	HECW1 (ENSANAG00000033887)	ENSANAG00000025842	MRPL32 (ENSANAG00000036260)	PSMA2 (ENSANAG00000038426)	C7orf25 (ENSANAG00000029268)	GLI3 (ENSANAG00000033410) #22	INHBA (ENSANAG00000022627) #23	SUGCT (ENSANAG00000025338) #24	MPLKIP (ENSANAG00000035918) #25	CDK13 (ENSANAG00000019746) #26	RALA (ENSANAG00000030583) #28	ENSANAG00000022924	YAE1 (ENSANAG00000037569) #29	POU6F2 (ENSANAG00000032939) #30	VPS41 (ENSANAG00000027607)	ENSANAG00000001067	AMPH (ENSANAG00000023088)	SLC25A26 (ENSANAG00000034578)	LRIG1 (ENSANAG00000020533)	KBTBD8 (ENSANAG00000032012)	SUCLG2 (ENSANAG00000033664)
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155142.j #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.a.e.a.c.b
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155959.l	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.a.e.a.c.b
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155959.l	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a	ENSGT00940000153143.a.a.e.a.d	ENSGT00940000153143.a.b.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	25	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155959.l	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a	ENSGT00940000153143.a.a.e.a.d	ENSGT00940000153143.a.b.a
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155959.l	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.a.a.a
Pan	ANCESTRAL SPECIES	25	ENSGT00390000000481	ENSGT00940000156175 #30	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000156732	ENSGT00950000182926.b.c	ENSGT00940000158490	ENSGT00940000158323	ENSGT00390000006780	ENSGT00940000161682	ENSGT00950000182787.E.d.e.b	ENSGT00390000015164.k	ENSGT00940000158973.b
Chimpanzee	MODERN SPECIES	20	VPS41 (ENSPTRG00000019104)	POU6F2 (ENSPTRG00000019105) #30	ENSPTRG00000048896	UBE2D4 (ENSPTRG00000045752)	URGCP (ENSPTRG00000019128)	MRPS24 (ENSPTRG00000019127)	BLVRA (ENSPTRG00000046316)	COA1 (ENSPTRG00000019125)	STK17A (ENSPTRG00000019124)	ENSPTRG00000050263	HECW1 (ENSPTRG00000019123)	MRPL32 (ENSPTRG00000019121)	PSMA2 (ENSPTRG00000019120)	C7H7orf25 (ENSPTRG00000023354)	ENSPTRG00000046687	GLI3 (ENSPTRG00000019117) #22	INHBA (ENSPTRG00000044337) #23	SUGCT (ENSPTRG00000019114) #24	MPLKIP (ENSPTRG00000019113) #25	CDK13 (ENSPTRG00000019112) #26	ENSPTRG00000034205	ENSPTRG00000050507	RALA (ENSPTRG00000019108) #28	ENSPTRG00000052776	YAE1 (ENSPTRG00000019106) #29	ENSPTRG00000039836	ENSPTRG00000028448	ENSPTRG00000050290	ENSPTRG00000047759	ENSPTRG00000051032	POLM (ENSPTRG00000019136)
Bonobo	MODERN SPECIES	20	AMPH (ENSPPAG00000042505)	VPS41 (ENSPPAG00000040109)	POU6F2 (ENSPPAG00000027855) #30	URGCP (ENSPPAG00000034294)	MRPS24 (ENSPPAG00000028164)	BLVRA (ENSPPAG00000029963)	COA1 (ENSPPAG00000030437)	ENSPPAG00000035958	ENSPPAG00000004221	HECW1 (ENSPPAG00000030847)	MRPL32 (ENSPPAG00000039260)	PSMA2 (ENSPPAG00000036019)	C7orf25 (ENSPPAG00000040042)	ENSPPAG00000036468	ENSPPAG00000022173	GLI3 (ENSPPAG00000043020) #22	INHBA (ENSPPAG00000036866) #23	SUGCT (ENSPPAG00000042639) #24	MPLKIP (ENSPPAG00000037056) #25	CDK13 (ENSPPAG00000041831) #26	RALA (ENSPPAG00000003692) #28	ENSPPAG00000036366	DBNL (ENSPPAG00000031811)	PGAM2 (ENSPPAG00000033065)	POLM (ENSPPAG00000037663)	AEBP1 (ENSPPAG00000004827)	POLD2 (ENSPPAG00000029927)	MYL7 (ENSPPAG00000038855)	GCK (ENSPPAG00000030131)	YKT6 (ENSPPAG00000019726)	CAMK2B (ENSPPAG00000033180)
Human	MODERN SPECIES	19	PGAM2 (ENSG00000164708)	DBNL (ENSG00000136279)	SPDYE1 (ENSG00000136206)	UBE2D4 (ENSG00000078967)	URGCP (ENSG00000106608)	URGCP-MRPS24 (ENSG00000270617)	MRPS24 (ENSG00000062582)	BLVRA (ENSG00000106605)	COA1 (ENSG00000106603)	STK17A (ENSG00000164543)	HECW1 (ENSG00000002746)	MRPL32 (ENSG00000106591)	PSMA2 (ENSG00000106588)	ENSG00000256646	C7orf25 (ENSG00000136197)	GLI3 (ENSG00000106571) #22	INHBA (ENSG00000122641) #23	SUGCT (ENSG00000175600) #24	MPLKIP (ENSG00000168303) #25	CDK13 (ENSG00000065883) #26	RALA (ENSG00000006451) #28	YAE1 (ENSG00000241127) #29	POU6F2 (ENSG00000106536) #30	VPS41 (ENSG00000006715)	AMPH (ENSG00000078053)	TRGV1 (ENSG00000211701)	TRGV2 (ENSG00000233306)	TRGV3 (ENSG00000211699)	TRGV4 (ENSG00000211698)	TRGV5 (ENSG00000211697)	TRGV8 (ENSG00000211696)
Gorilla	MODERN SPECIES	20	ENSGGOG00000022687	ENSGGOG00000043186	ENSGGOG00000037960	UBE2D4 (ENSGGOG00000042519)	URGCP (ENSGGOG00000043726)	MRPS24 (ENSGGOG00000005692)	BLVRA (ENSGGOG00000001735)	COA1 (ENSGGOG00000034928)	ENSGGOG00000007657	HECW1 (ENSGGOG00000024448)	MRPL32 (ENSGGOG00000027492)	PSMA2 (ENSGGOG00000006538)	C7orf25 (ENSGGOG00000002250)	ENSGGOG00000037303	ENSGGOG00000027255	GLI3 (ENSGGOG00000002026) #22	INHBA (ENSGGOG00000042209) #23	SUGCT (ENSGGOG00000034863) #24	MPLKIP (ENSGGOG00000041032) #25	CDK13 (ENSGGOG00000007884) #26	ENSGGOG00000006834	ENSGGOG00000043450	ENSGGOG00000041831	ENSGGOG00000039686	YAE1 (ENSGGOG00000006725) #29	POU6F2 (ENSGGOG00000006718) #30	VPS41 (ENSGGOG00000006665)	ENSGGOG00000036763	AMPH (ENSGGOG00000010988)	ENSGGOG00000042829	ENSGGOG00000041674
Orangutan	MODERN SPECIES	20	POLD2 (ENSPPYG00000017597)	AEBP1 (ENSPPYG00000030504)	ENSPPYG00000017598	PGAM2 (ENSPPYG00000017599)	DBNL (ENSPPYG00000017600)	ENSPPYG00000038796	URGCP (ENSPPYG00000017603)	MRPS24 (ENSPPYG00000017604)	BLVRA (ENSPPYG00000017605)	COA1 (ENSPPYG00000017606)	STK17A (ENSPPYG00000017607)	HECW1 (ENSPPYG00000017608)	MRPL32 (ENSPPYG00000017611)	PSMA2 (ENSPPYG00000030380)	C7orf25 (ENSPPYG00000034147)	GLI3 (ENSPPYG00000017613) #22	INHBA (ENSPPYG00000038204) #23	SUGCT (ENSPPYG00000017615) #24	MPLKIP (ENSPPYG00000017617) #25	CDK13 (ENSPPYG00000017618) #26	RALA (ENSPPYG00000017619) #28	YAE1 (ENSPPYG00000035738) #29	POU6F2 (ENSPPYG00000029778) #30	VPS41 (ENSPPYG00000017621)	AMPH (ENSPPYG00000017623)	ENSPPYG00000033370	ENSPPYG00000030711	ENSPPYG00000037818	ENSPPYG00000037594	ENSPPYG00000032682	ENSPPYG00000034194
Gibbon	MODERN SPECIES	7	PGAM2 (ENSNLEG00000003550)	DBNL (ENSNLEG00000003395)	UBE2D4 (ENSNLEG00000003364)	URGCP (ENSNLEG00000003351)	ENSNLEG00000026683	MRPS24 (ENSNLEG00000033007)	BLVRA (ENSNLEG00000003333)	COA1 (ENSNLEG00000003316)	STK17A (ENSNLEG00000003304)	ENSNLEG00000035608	HECW1 (ENSNLEG00000003209)	MRPL32 (ENSNLEG00000027404)	PSMA2 (ENSNLEG00000003177)	ENSNLEG00000027384	C7orf25 (ENSNLEG00000003174)	GLI3 (ENSNLEG00000003160) #22	INHBA (ENSNLEG00000003153) #23	SUGCT (ENSNLEG00000003120) #24	MPLKIP (ENSNLEG00000028028) #25	CDK13 (ENSNLEG00000003097) #26	RALA (ENSNLEG00000003055) #28	YAE1 (ENSNLEG00000032479) #29	ENSNLEG00000029534	POU6F2 (ENSNLEG00000003036) #30	VPS41 (ENSNLEG00000002939)	AMPH (ENSNLEG00000002797)	ENSNLEG00000027199	ENSNLEG00000028134	ENSNLEG00000030425	ENSNLEG00000029674	ENSNLEG00000030988
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155142.j #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.b	ENSGT00940000153143.a.a.e.b
Rhinopithecus	ANCESTRAL SPECIES	306																ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866.c #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT01040000241441	ENSGT00940000155142.i.b #28	ENSGT00940000170592	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000004524.c.a.a.a.b.f	ENSGT00390000000481	ENSGT00390000006224.i.b.c	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a.c.a
Golden snub-nosed monkey	MODERN SPECIES	1141																GLI3 (ENSRROG00000035040) #22	INHBA (ENSRROG00000034770) #23	ENSRROG00000009684	ENSRROG00000033340 #24	MPLKIP (ENSRROG00000031838) #25	CDK13 (ENSRROG00000021528) #26	ENSRROG00000035116	RALA (ENSRROG00000039058) #28	ENSRROG00000041289	YAE1 (ENSRROG00000039482) #29	POU6F2 (ENSRROG00000035258) #30	ENSRROG00000036412	VPS41 (ENSRROG00000037254)	ENSRROG00000032501	ENSRROG00000035173	ENSRROG00000011911
Black snub-nosed monkey	MODERN SPECIES	211															ENSRBIG00000038202	GLI3 (ENSRBIG00000037773) #22	INHBA (ENSRBIG00000034433) #23	ENSRBIG00000039916	ENSRBIG00000030763 #24	MPLKIP (ENSRBIG00000043237) #25	CDK13 (ENSRBIG00000039699) #26	ENSRBIG00000024978	RALA (ENSRBIG00000039597) #28	ENSRBIG00000039338	YAE1 (ENSRBIG00000040664) #29	POU6F2 (ENSRBIG00000030181) #30	ENSRBIG00000032543	VPS41 (ENSRBIG00000042579)	ENSRBIG00000005517	ENSRBIG00000035101	ENSRBIG00000036614
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155142.j #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b.a	ENSGT00940000153143.a.a.e.a.c.b
Vervet Monkey	MODERN SPECIES	13	POLM (ENSCSAG00000015486)	PGAM2 (ENSCSAG00000015481)	DBNL (ENSCSAG00000015475)	UBE2D4 (ENSCSAG00000015467)	URGCP (ENSCSAG00000015454)	MRPS24 (ENSCSAG00000015447)	BLVRA (ENSCSAG00000015441)	COA1 (ENSCSAG00000015432)	STK17A (ENSCSAG00000015428)	HECW1 (ENSCSAG00000015421)	ENSCSAG00000015403	PSMA2 (ENSCSAG00000015394)	C7orf25 (ENSCSAG00000015390)	ENSCSAG00000015385	ENSCSAG00000019599	GLI3 (ENSCSAG00000015361) #22	INHBA (ENSCSAG00000015294) #23	ENSCSAG00000019600	SUGCT (ENSCSAG00000015289) #24	MPLKIP (ENSCSAG00000015281) #25	CDK13 (ENSCSAG00000015259) #26	RALA (ENSCSAG00000015217) #28	YAE1 (ENSCSAG00000015211) #29	ENSCSAG00000019601	POU6F2 (ENSCSAG00000015201) #30	VPS41 (ENSCSAG00000015187)	ENSCSAG00000019602	AMPH (ENSCSAG00000015175)	ENSCSAG00000015163	ENSCSAG00000015152	ENSCSAG00000015150
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT01040000241441	ENSGT00940000155142.i.b #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00960000187337	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b.a	ENSGT00940000153143.a.a.e.a.c.b
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00940000155142.j #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00960000187337	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a
Cercopithecinae_d	ANCESTRAL SPECIES	10	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT01040000241441	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00960000187337	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b
Drill	MODERN SPECIES	1159													MRPL32 (ENSMLEG00000025401)	PSMA2 (ENSMLEG00000030861)	ENSMLEG00000030633	GLI3 (ENSMLEG00000028509) #22	INHBA (ENSMLEG00000021286) #23	SUGCT (ENSMLEG00000033800) #24
Sooty mangabey	MODERN SPECIES	252	DBNL (ENSCATG00000029728)	ENSCATG00000021056	UBE2D4 (ENSCATG00000030978)	ENSCATG00000031150	URGCP (ENSCATG00000031265)	MRPS24 (ENSCATG00000033132)	BLVRA (ENSCATG00000043396)	COA1 (ENSCATG00000044042)	STK17A (ENSCATG00000033831)	ENSCATG00000020670	HECW1 (ENSCATG00000043550)	MRPL32 (ENSCATG00000038411)	PSMA2 (ENSCATG00000029633)	C7orf25 (ENSCATG00000032582)	ENSCATG00000030767	GLI3 (ENSCATG00000036694) #22	INHBA (ENSCATG00000036508) #23
Olive baboon	MODERN SPECIES	14	ENSPANG00000002445	POLM (ENSPANG00000023968)	PGAM2 (ENSPANG00000014548)	DBNL (ENSPANG00000019050)	URGCP (ENSPANG00000023114)	BLVRA (ENSPANG00000007077)	COA1 (ENSPANG00000041899)	STK17A (ENSPANG00000022843)	HECW1 (ENSPANG00000022845)	ENSPANG00000043395	MRPL32 (ENSPANG00000023966)	PSMA2 (ENSPANG00000007348)	C7orf25 (ENSPANG00000040755)	ENSPANG00000041647	ENSPANG00000050641	GLI3 (ENSPANG00000014545) #22	INHBA (ENSPANG00000000357) #23	ENSPANG00000041607	ENSPANG00000047702	ENSPANG00000040486	ENSPANG00000050783	SUGCT (ENSPANG00000006854) #24	MPLKIP (ENSPANG00000003774) #25	CDK13 (ENSPANG00000022842) #26	ENSPANG00000049728	RALA (ENSPANG00000022183) #28	YAE1 (ENSPANG00000001303) #29	POU6F2 (ENSPANG00000007998) #30	VPS41 (ENSPANG00000003773)	AMPH (ENSPANG00000013001)	ENSPANG00000043792
Macaca	ANCESTRAL SPECIES	3	ENSGT00910000147095	ENSGT00940000160915.f	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00940000163323.c.a	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00550000074878.`b.b	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142.i.b #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00960000187337	ENSGT00390000006224.i.b	ENSGT00940000153339.a.a.b.a	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b.a	ENSGT00940000153143.a.a.e.a.c.b	ENSGT00940000153143.a.a.e.b.b
Pig-tailed macaque	MODERN SPECIES	212	ENSMNEG00000038254	UBE2D4 (ENSMNEG00000038205)	URGCP (ENSMNEG00000005790)	MRPS24 (ENSMNEG00000044096)	BLVRA (ENSMNEG00000036114)	COA1 (ENSMNEG00000035017)	STK17A (ENSMNEG00000040471)	ENSMNEG00000037947	ENSMNEG00000033977	HECW1 (ENSMNEG00000028314)	MRPL32 (ENSMNEG00000042550)	PSMA2 (ENSMNEG00000043089)	C7orf25 (ENSMNEG00000038920)	ENSMNEG00000034098	ENSMNEG00000039253	GLI3 (ENSMNEG00000019458) #22	INHBA (ENSMNEG00000041912) #23
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915.e.a	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00940000163323.c.a	ENSGT00390000014996.y	ENSGT00550000074870.b.nc	ENSGT00390000014722	ENSGT00960000190657	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT01100000263539.b.a.a.a.a.b.b.a.b.a.a	ENSGT00940000155142.i.b #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b.a	ENSGT00940000153143.a.a.e.a.c.b	ENSGT00940000153143.a.a.e.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b
Rhesus	MODERN SPECIES	13	AEBP1 (ENSMMUG00000002422)	POLM (ENSMMUG00000002421)	PGAM2 (ENSMMUG00000064860)	URGCP (ENSMMUG00000002408)	COA1 (ENSMMUG00000019023)	BLVRA (ENSMMUG00000017382)	STK17A (ENSMMUG00000019022)	HECW1 (ENSMMUG00000019015)	ENSMMUG00000057956	ENSMMUG00000049363	MRPL32 (ENSMMUG00000060273)	PSMA2 (ENSMMUG00000022451)	C3H7orf25 (ENSMMUG00000022449)	ENSMMUG00000051741	ENSMMUG00000052530	GLI3 (ENSMMUG00000013614) #22	INHBA (ENSMMUG00000061466) #23	ENSMMUG00000054924	SUGCT (ENSMMUG00000001702) #24	ENSMMUG00000065307	MPLKIP (ENSMMUG00000054607) #25	CDK13 (ENSMMUG00000018064) #26	ENSMMUG00000052918	RALA (ENSMMUG00000050621) #28	ENSMMUG00000050440	YAE1 (ENSMMUG00000013563) #29	POU6F2 (ENSMMUG00000017106) #30	ENSMMUG00000050009	ENSMMUG00000051801	VPS41 (ENSMMUG00000010042)	AMPH (ENSMMUG00000023667)
Crab-eating macaque	MODERN SPECIES	13	PGAM2 (ENSMFAG00000048956)	DBNL (ENSMFAG00000032367)	ENSMFAG00000000260	URGCP (ENSMFAG00000034049)	MRPS24 (ENSMFAG00000003446)	COA1 (ENSMFAG00000039026)	BLVRA (ENSMFAG00000036162)	STK17A (ENSMFAG00000043073)	ENSMFAG00000055954	HECW1 (ENSMFAG00000003543)	ENSMFAG00000056799	MRPL32 (ENSMFAG00000041218)	PSMA2 (ENSMFAG00000032277)	C7orf25 (ENSMFAG00000027286)	ENSMFAG00000056967	ENSMFAG00000057391 #22	INHBA (ENSMFAG00000054517) #23	SUGCT (ENSMFAG00000043400) #24	MPLKIP (ENSMFAG00000045608) #25	ENSMFAG00000000645 #26	ENSMFAG00000058593	ENSMFAG00000057338	ENSMFAG00000050186	RALA (ENSMFAG00000001704) #28	YAE1 (ENSMFAG00000030308) #29	POU6F2 (ENSMFAG00000035869) #30	VPS41 (ENSMFAG00000041501)	ENSMFAG00000060851	ENSMFAG00000048709	AMPH (ENSMFAG00000000228)	ENSMFAG00000054044
Euarchontoglires_A	ANCESTRAL SPECIES	23	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000168125	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a
Tree shrew	MODERN SPECIES	175																GLI3 (ENSTBEG00000006673) #22
Glires	ANCESTRAL SPECIES	24	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000168125	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a
Lagomorpha	ANCESTRAL SPECIES	164											ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000164413
Rabbit	MODERN SPECIES	1	ENSOCUG00000034975	ENSOCUG00000031107	THSD7A (ENSOCUG00000008865)	TMEM106B (ENSOCUG00000010288)	ENSOCUG00000029201	ENSOCUG00000033293	ENSOCUG00000029493	SCIN (ENSOCUG00000006986)	ENSOCUG00000008172	BLVRA (ENSOCUG00000006916)	STK17A (ENSOCUG00000015953)	HECW1 (ENSOCUG00000007994)	ENSOCUG00000012098	PSMA2 (ENSOCUG00000012092)	C7orf25 (ENSOCUG00000012089)	GLI3 (ENSOCUG00000006563) #22	INHBA (ENSOCUG00000000621) #23	ENSOCUG00000033395	SUGCT (ENSOCUG00000003191) #24	MPLKIP (ENSOCUG00000003189) #25	ENSOCUG00000016583 #26	ENSOCUG00000016581 #28	YAE1 (ENSOCUG00000011496) #29	ENSOCUG00000039486	POU6F2 (ENSOCUG00000013896) #30	VPS41 (ENSOCUG00000000676)	AMPH (ENSOCUG00000002244)	ENSOCUG00000032571	ENSOCUG00000025800	ENSOCUG00000031806	ENSOCUG00000025628
Pika	MODERN SPECIES	53																GLI3 (ENSOPRG00000011225) #22
Rodentia	ANCESTRAL SPECIES	12	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.a	ENSGT00940000168125	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a
Rodentia_B	ANCESTRAL SPECIES	40	ENSGT00940000161552	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Kangaroo rat	MODERN SPECIES	480											ENSDORG00000010332	Hecw1 (ENSDORG00000011163)	Mrpl32 (ENSDORG00000011748)	Psma2 (ENSDORG00000011746)	AW209491 (ENSDORG00000026137)	Gli3 (ENSDORG00000001532) #22	ENSDORG00000001744 #23	Sugct (ENSDORG00000001011) #24	ENSDORG00000001010 #25	ENSDORG00000028130 #26	ENSDORG00000027169	Rala (ENSDORG00000024439) #28	Yae1d1 (ENSDORG00000009759) #29	Pou6f2 (ENSDORG00000011157) #30	Vps41 (ENSDORG00000015881)	ENSDORG00000023528	Amph (ENSDORG00000000364)	Trgc4 (ENSDORG00000029771)	ENSDORG00000015981	ENSDORG00000025334	ENSDORG00000014695
Myomorpha	ANCESTRAL SPECIES	50	ENSGT00940000161552	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Lesser Egyptian jerboa	MODERN SPECIES	161					Vstm2a (ENSJJAG00000016705)	Sec61g (ENSJJAG00000015922)	Egfr (ENSJJAG00000014249)	Lancl2 (ENSJJAG00000012831)	Vopp1 (ENSJJAG00000012611)	Blvra (ENSJJAG00000012133)	ENSJJAG00000012096	Hecw1 (ENSJJAG00000011435)	Mrpl32 (ENSJJAG00000010906)	ENSJJAG00000010341	AW209491 (ENSJJAG00000010303)	Gli3 (ENSJJAG00000009019) #22	Inhba (ENSJJAG00000007614) #23	ENSJJAG00000007354	Sugct (ENSJJAG00000010553) #24	ENSJJAG00000009580 #25	ENSJJAG00000007969 #26	Rala (ENSJJAG00000006484) #28	9530077C05Rik (ENSJJAG00000005276)	Elmo1 (ENSJJAG00000003658)	ENSJJAG00000000615	Gpr141 (ENSJJAG00000012473)	Nme8 (ENSJJAG00000000267)	Sfrp4 (ENSJJAG00000024190)	Epdr1 (ENSJJAG00000024132)	Stard3nl (ENSJJAG00000023909)	Amph (ENSJJAG00000022889)
Muroidea	ANCESTRAL SPECIES	78												ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Upper Galilee mountains blind mole rat	MODERN SPECIES	955	Pif1 (ENSNGAG00000021720)	Rbpms2 (ENSNGAG00000023569)	ENSNGAG00000015132	Zfp609 (ENSNGAG00000013924)	Trip4 (ENSNGAG00000019566)	Pclaf (ENSNGAG00000014228)	Csnk1g1 (ENSNGAG00000020698)	Ppib (ENSNGAG00000010794)	Snx22 (ENSNGAG00000009778)	Snx1 (ENSNGAG00000008529)	Ciao2a (ENSNGAG00000011845)	ENSNGAG00000011632	Hecw1 (ENSNGAG00000002566)	Mrpl32 (ENSNGAG00000014806)	Psma2 (ENSNGAG00000014399)	ENSNGAG00000005007 #22	ENSNGAG00000017257	Inhba (ENSNGAG00000016837) #23	Sugct (ENSNGAG00000004026) #24	ENSNGAG00000024052 #25	Cdk13 (ENSNGAG00000021278) #26	Rala (ENSNGAG00000020171) #28
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00940000155727	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000155727	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00940000155727	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000164413	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Chinese hamster chok1gshd	MODERN SPECIES	317	Lgals8 (ENSCGRG00001016202)	Edaradd (ENSCGRG00001007181)	Ero1b (ENSCGRG00001025067)	Gpr137b (ENSCGRG00001015900)	Nid1 (ENSCGRG00001013281)	Lyst (ENSCGRG00001018628)	Gng4 (ENSCGRG00001003037)	B3galnt2 (ENSCGRG00001011516)	Tbce (ENSCGRG00001023614)	Ggps1 (ENSCGRG00001020297)	Arid4b (ENSCGRG00001014397)	Hecw1 (ENSCGRG00001018493)	Mrpl32 (ENSCGRG00001016443)	Psma2 (ENSCGRG00001023927)	AW209491 (ENSCGRG00001006859)	Gli3 (ENSCGRG00001007632) #22	Inhba (ENSCGRG00001019473) #23	Sugct (ENSCGRG00001009192) #24	ENSCGRG00001011481 #25	Cdk13 (ENSCGRG00001020334) #26	ENSCGRG00001012449 #28	Yae1d1 (ENSCGRG00001020898) #29	ENSCGRG00001025025 #30	ENSCGRG00001010504 #30	ENSCGRG00001005827	Vps41 (ENSCGRG00001018659)	Amph (ENSCGRG00001019554)	ENSCGRG00001009580	Stard3nl (ENSCGRG00001000801)	Epdr1 (ENSCGRG00001014717)	Sfrp4 (ENSCGRG00001016880)
Golden Hamster	MODERN SPECIES	646	Lgals8 (ENSMAUG00000009404)	Edaradd (ENSMAUG00000009216)	Ero1b (ENSMAUG00000003884)	Gpr137b (ENSMAUG00000007847)	Nid1 (ENSMAUG00000002084)	Lyst (ENSMAUG00000001405)	Gng4 (ENSMAUG00000011229)	B3galnt2 (ENSMAUG00000013962)	Tbce (ENSMAUG00000013936)	ENSMAUG00000021330	ENSMAUG00000012797	Hecw1 (ENSMAUG00000003157)	Mrpl32 (ENSMAUG00000019188)	Psma2 (ENSMAUG00000009719)	AW209491 (ENSMAUG00000007021)	Gli3 (ENSMAUG00000010007) #22	Inhba (ENSMAUG00000021024) #23	Sugct (ENSMAUG00000009567) #24	ENSMAUG00000016486 #25	Cdk13 (ENSMAUG00000017760) #26	Rala (ENSMAUG00000008652) #28	Yae1d1 (ENSMAUG00000015770) #29	ENSMAUG00000013131 #30	Vps41 (ENSMAUG00000018045)	ENSMAUG00000015422	Stard3nl (ENSMAUG00000014492)	Epdr1 (ENSMAUG00000004400)	Sfrp4 (ENSMAUG00000018868)	Nme8 (ENSMAUG00000016668)	Gpr141 (ENSMAUG00000008686)	Elmo1 (ENSMAUG00000021051)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000155727	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Northern American deer mouse	MODERN SPECIES	18	Edaradd (ENSPEMG00000024740)	Ero1b (ENSPEMG00000023632)	Gpr137b (ENSPEMG00000021433)	Nid1 (ENSPEMG00000008596)	Lyst (ENSPEMG00000020616)	Gng4 (ENSPEMG00000026205)	Tbce (ENSPEMG00000020911)	Ggps1 (ENSPEMG00000020821)	Arid4b (ENSPEMG00000023491)	Hecw1 (ENSPEMG00000023229)	Mrpl32 (ENSPEMG00000031368)	Psma2 (ENSPEMG00000000680)	AW209491 (ENSPEMG00000016335)	ENSPEMG00000026547	ENSPEMG00000011637	Gli3 (ENSPEMG00000022194) #22	ENSPEMG00000001076	Inhba (ENSPEMG00000030253) #23	ENSPEMG00000028161	Sugct (ENSPEMG00000020290) #24	ENSPEMG00000026169 #25	Cdk13 (ENSPEMG00000020703) #26	ENSPEMG00000027212	Rala (ENSPEMG00000026406) #28	Yae1d1 (ENSPEMG00000026901) #29	ENSPEMG00000020563 #30	Vps41 (ENSPEMG00000022150)	Amph (ENSPEMG00000001572)	ENSPEMG00000030093	ENSPEMG00000030898	Stard3nl (ENSPEMG00000012415)
Prairie vole	MODERN SPECIES	85	Ero1b (ENSMOCG00000000371)	Gpr137b (ENSMOCG00000002995)	Nid1 (ENSMOCG00000014455)	Lyst (ENSMOCG00000020883)	Gng4 (ENSMOCG00000016288)	B3galnt2 (ENSMOCG00000000181)	Tbce (ENSMOCG00000009857)	Ggps1 (ENSMOCG00000018805)	ENSMOCG00000007240	ENSMOCG00000003914	Hecw1 (ENSMOCG00000001967)	Mrpl32 (ENSMOCG00000000157)	ENSMOCG00000013606	AW209491 (ENSMOCG00000022967)	ENSMOCG00000014175	Gli3 (ENSMOCG00000018186) #22	Inhba (ENSMOCG00000001049) #23	Sugct (ENSMOCG00000021393) #24	ENSMOCG00000013905 #25	Cdk13 (ENSMOCG00000018212) #26	Rala (ENSMOCG00000000189) #28	Yae1d1 (ENSMOCG00000012487) #29	ENSMOCG00000015726 #30	ENSMOCG00000005809	ENSMOCG00000004652	Vps41 (ENSMOCG00000018741)
Murinae	ANCESTRAL SPECIES	27	ENSGT00940000155727	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Mus	ANCESTRAL SPECIES	18	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000168709	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b.j	ENSGT00940000153143.a.b.a	ENSGT00940000168125	ENSGT00950000186470	ENSGT00860000135699
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000168709	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996.db	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b.j	ENSGT00940000153143.a.b.a	ENSGT00940000168125	ENSGT00950000186470	ENSGT00860000135699
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000168709	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996.db	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b.j	ENSGT00980000200102	ENSGT00940000168125	ENSGT00950000186470	ENSGT00860000135699
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000168709	ENSGT00940000156359	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00940000158294	ENSGT00390000014996.db	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.b	ENSGT00940000153143.a.b.b.b.j	ENSGT00980000200102	ENSGT00940000168125	ENSGT00950000186470	ENSGT00860000135699
Steppe mouse	MODERN SPECIES	16													Mrpl32 (ENSMSIG00000013590)	Psma2 (ENSMSIG00000013613)	AW209491 (ENSMSIG00000013663)	Gli3 (ENSMSIG00000013680) #22	Inhba (ENSMSIG00000013725) #23	ENSMSIG00000013739	ENSMSIG00000013766
spretus	MODERN SPECIES	4	Ero1b (MGP_SPRETEiJ_G0019084)	Gpr137b (MGP_SPRETEiJ_G0019085)	Nid1 (MGP_SPRETEiJ_G0019086)	MGP_SPRETEiJ_G0019087	Lyst (MGP_SPRETEiJ_G0019088)	Gng4 (MGP_SPRETEiJ_G0019089)	MGP_SPRETEiJ_G0019090	B3galnt2 (MGP_SPRETEiJ_G0019091)	Tbce (MGP_SPRETEiJ_G0019092)	MGP_SPRETEiJ_G0019093	Arid4b (MGP_SPRETEiJ_G0019094)	Hecw1 (MGP_SPRETEiJ_G0019095)	Mrpl32 (MGP_SPRETEiJ_G0019096)	Psma2 (MGP_SPRETEiJ_G0019097)	AW209491 (MGP_SPRETEiJ_G0019098)	Gli3 (MGP_SPRETEiJ_G0019099) #22	Inhba (MGP_SPRETEiJ_G0019100) #23	MGP_SPRETEiJ_G0019101 #24	Cdk13 (MGP_SPRETEiJ_G0019102) #26	Rala (MGP_SPRETEiJ_G0019103) #28	Yae1d1 (MGP_SPRETEiJ_G0019104) #29	Pou6f2 (MGP_SPRETEiJ_G0019105) #30	Vps41 (MGP_SPRETEiJ_G0019106)	MGP_SPRETEiJ_G0019107	Trgv7 (MGP_SPRETEiJ_G0002330)	Trgv4 (MGP_SPRETEiJ_G0002331)	Trgv6 (MGP_SPRETEiJ_G0002332)	Trgv5 (MGP_SPRETEiJ_G0002333)	Trgj3 (MGP_SPRETEiJ_G0002253)	Trgj4 (MGP_SPRETEiJ_G0002254)	Trgc4 (MGP_SPRETEiJ_G0002244)
Mouse	MODERN SPECIES	4	Prl2c3 (ENSMUSG00000056457)	Prl2c2 (ENSMUSG00000079092)	Prl2c5 (ENSMUSG00000055360)	Gpr137b (ENSMUSG00000021306)	Nid1 (ENSMUSG00000005397)	Lyst (ENSMUSG00000019726)	Gng4 (ENSMUSG00000021303)	B3galnt2 (ENSMUSG00000039242)	Tbce (ENSMUSG00000039233)	Ggps1 (ENSMUSG00000021302)	Arid4b (ENSMUSG00000039219)	Hecw1 (ENSMUSG00000021301)	Mrpl32 (ENSMUSG00000015672)	Psma2 (ENSMUSG00000015671)	AW209491 (ENSMUSG00000039182)	Gli3 (ENSMUSG00000021318) #22	Inhba (ENSMUSG00000041324) #23	Sugct (ENSMUSG00000055137) #24	Mplkip (ENSMUSG00000012429) #25	Cdk13 (ENSMUSG00000041297) #26	Rala (ENSMUSG00000008859) #28	Yae1d1 (ENSMUSG00000075054) #29	Pou6f2 (ENSMUSG00000009734) #30	Vps41 (ENSMUSG00000041236)	Amph (ENSMUSG00000021314)	Trgv7 (ENSMUSG00000076744)	Trgv4 (ENSMUSG00000076745)	Trgv6 (ENSMUSG00000076746)	Trgv5 (ENSMUSG00000076747)	Trgj1 (ENSMUSG00000104962)	Trgc1 (ENSMUSG00000076749)
Ryukyu mouse	MODERN SPECIES	4	Ero1b (MGP_CAROLIEiJ_G0018226)	Gpr137b (MGP_CAROLIEiJ_G0018227)	Nid1 (MGP_CAROLIEiJ_G0018228)	MGP_CAROLIEiJ_G0018229	Lyst (MGP_CAROLIEiJ_G0018230)	Gng4 (MGP_CAROLIEiJ_G0018231)	B3galnt2 (MGP_CAROLIEiJ_G0018232)	MGP_CAROLIEiJ_G0018233	Tbce (MGP_CAROLIEiJ_G0018234)	Ggps1 (MGP_CAROLIEiJ_G0018235)	Arid4b (MGP_CAROLIEiJ_G0018236)	Hecw1 (MGP_CAROLIEiJ_G0018237)	Mrpl32 (MGP_CAROLIEiJ_G0018238)	Psma2 (MGP_CAROLIEiJ_G0018239)	AW209491 (MGP_CAROLIEiJ_G0018240)	Gli3 (MGP_CAROLIEiJ_G0018241) #22	Inhba (MGP_CAROLIEiJ_G0018242) #23	Sugct (MGP_CAROLIEiJ_G0018243) #24	MGP_CAROLIEiJ_G0018244 #25	MGP_CAROLIEiJ_G0018245 #25	Cdk13 (MGP_CAROLIEiJ_G0018246) #26	Rala (MGP_CAROLIEiJ_G0018247) #28	Yae1d1 (MGP_CAROLIEiJ_G0018248) #29	Pou6f2 (MGP_CAROLIEiJ_G0018249) #30	Vps41 (MGP_CAROLIEiJ_G0018250)	MGP_CAROLIEiJ_G0018251	Trgv7 (MGP_CAROLIEiJ_G0002202)	Trgv4 (MGP_CAROLIEiJ_G0002203)	MGP_CAROLIEiJ_G0002204	Trgv5 (MGP_CAROLIEiJ_G0002205)	Trgj3 (MGP_CAROLIEiJ_G0002126)
Shrew mouse	MODERN SPECIES	7	Ero1b (MGP_PahariEiJ_G0019276)	Gpr137b (MGP_PahariEiJ_G0019277)	Nid1 (MGP_PahariEiJ_G0019278)	MGP_PahariEiJ_G0019279	Lyst (MGP_PahariEiJ_G0019280)	Gng4 (MGP_PahariEiJ_G0019281)	B3galnt2 (MGP_PahariEiJ_G0019282)	MGP_PahariEiJ_G0019283	MGP_PahariEiJ_G0019284	Ggps1 (MGP_PahariEiJ_G0019285)	Arid4b (MGP_PahariEiJ_G0019286)	Hecw1 (MGP_PahariEiJ_G0019287)	Mrpl32 (MGP_PahariEiJ_G0019288)	Psma2 (MGP_PahariEiJ_G0019289)	AW209491 (MGP_PahariEiJ_G0019290)	Gli3 (MGP_PahariEiJ_G0019291) #22	Inhba (MGP_PahariEiJ_G0019292) #23	Sugct (MGP_PahariEiJ_G0019293) #24	MGP_PahariEiJ_G0019294 #25	MGP_PahariEiJ_G0019295 #25	Cdk13 (MGP_PahariEiJ_G0019296) #26	Rala (MGP_PahariEiJ_G0019297) #28	Yae1d1 (MGP_PahariEiJ_G0019298) #29	Pou6f2 (MGP_PahariEiJ_G0019299) #30	Vps41 (MGP_PahariEiJ_G0019300)	MGP_PahariEiJ_G0019301	Trgv7 (MGP_PahariEiJ_G0002039)	Trgv4 (MGP_PahariEiJ_G0002040)	MGP_PahariEiJ_G0002041	Trgv5 (MGP_PahariEiJ_G0002042)	Trgj3 (MGP_PahariEiJ_G0001962)
Rat	DUPLICATION
Rat	MODERN SPECIES	8	Zeb1 (ENSRNOG00000017863)	Arhgap12 (ENSRNOG00000017791)	Kif5b (ENSRNOG00000017466)	B3galnt2 (ENSRNOG00000016855)	Tbce (ENSRNOG00000029667)	Ggps1 (ENSRNOG00000016767)	Arid4b (ENSRNOG00000016391)	ENSRNOG00000064563	Rbbp4-ps2 (ENSRNOG00000021292)	Hecw1 (ENSRNOG00000016046)	Mrpl32 (ENSRNOG00000015989)	Psma2 (ENSRNOG00000049920)	RGD1308147 (ENSRNOG00000015523)	Gabpb1l (ENSRNOG00000053439)	Psme1-ps1 (ENSRNOG00000061359)	Gli3 (ENSRNOG00000014395) #22	Inhba (ENSRNOG00000014320) #23	Sugct (ENSRNOG00000066247) #24	Mplkip (ENSRNOG00000013806) #25	Cdk13 (ENSRNOG00000013620) #26	Rala (ENSRNOG00000013454) #28	Yae1 (ENSRNOG00000013438) #29	AABR07027925.2 (ENSRNOG00000030925)	Pou6f2 (ENSRNOG00000013237) #30	Vps41 (ENSRNOG00000012940)	LOC100910792 (ENSRNOG00000059510)	ENSRNOG00000070051	AABR07027872.1 (ENSRNOG00000055197)	ENSRNOG00000066100	ENSRNOG00000063508	Stard3nl (ENSRNOG00000052429)
Rat	MODERN SPECIES	4	Marco (ENSRNOG00000049303)	C1ql2 (ENSRNOG00000046863)	Steap3 (ENSRNOG00000049471)	C13h2orf76 (ENSRNOG00000045570)	Dbi (ENSRNOG00000046889)	Tmem37 (ENSRNOG00000047714)	Sctr (ENSRNOG00000049766)	Cfap221 (ENSRNOG00000056781)	Tmem177 (ENSRNOG00000025484)	Ptpn4 (ENSRNOG00000002625)	Epb41l5 (ENSRNOG00000002538)	Tmem185b (ENSRNOG00000067956)	Ralb (ENSRNOG00000002440)	Inhbb (ENSRNOG00000060237)	ENSRNOG00000070618	Gli2 (ENSRNOG00000007261) #22	Tfcp2l1 (ENSRNOG00000002414)	Clasp1 (ENSRNOG00000002376)	Nifk (ENSRNOG00000025701)	Tsn (ENSRNOG00000002319)	ENSRNOG00000070301	ENSRNOG00000069109	LOC120096235 (ENSRNOG00000070646)	Cdh19 (ENSRNOG00000029841)	Cdh7 (ENSRNOG00000032490)	ENSRNOG00000063241	LOC108348870 (ENSRNOG00000029410)	RGD1560523 (ENSRNOG00000028513)	Serpinb8 (ENSRNOG00000002396)	Serpinb10 (ENSRNOG00000002417)	Serpinb2 (ENSRNOG00000002460)
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000155476
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.a.c	ENSGT01060000248976	ENSGT00940000153143.a.b.b.a.b.d.a.d	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Marmotini	ANCESTRAL SPECIES	37	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153505.a.a.c.a	ENSGT00390000011072	ENSGT00960000189879	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a	ENSGT01060000248976.a	ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b	ENSGT01060000248976.b	ENSGT00940000153143.a.b.b.a.b.d.a.d.a	ENSGT00940000155476
Marmotini_b	ANCESTRAL SPECIES	26	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153505.a.a.c.a	ENSGT00390000011072	ENSGT00960000189879	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a	ENSGT01060000248976.a	ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b	ENSGT01060000248976.b	ENSGT00940000153143.a.b.b.a.b.d.a.d.a	ENSGT00940000155476
Arctic ground squirrel	MODERN SPECIES	457															ENSUPAG00010010735	GLI3 (ENSUPAG00010010719) #22	INHBA (ENSUPAG00010010709) #23
Squirrel	MODERN SPECIES	78	MYL7 (ENSSTOG00000002725)	POLD2 (ENSSTOG00000002713)	AEBP1 (ENSSTOG00000002677)	POLM (ENSSTOG00000002662)	PGAM2 (ENSSTOG00000008573)	DBNL (ENSSTOG00000002644)	UBE2D4 (ENSSTOG00000002630)	URGCP (ENSSTOG00000010637)	MRPS24 (ENSSTOG00000032907)	BLVRA (ENSSTOG00000021499)	STK17A (ENSSTOG00000026139)	HECW1 (ENSSTOG00000016043)	MRPL32 (ENSSTOG00000013340)	PSMA2 (ENSSTOG00000013334)	C7orf25 (ENSSTOG00000027844)	GLI3 (ENSSTOG00000020844) #22	ENSSTOG00000034121 #23	SUGCT (ENSSTOG00000011998) #24	MPLKIP (ENSSTOG00000026468) #25	CDK13 (ENSSTOG00000022568) #26	RALA (ENSSTOG00000020292) #28	YAE1 (ENSSTOG00000023547) #29	ENSSTOG00000023336 #30	VPS41 (ENSSTOG00000007343)	AMPH (ENSSTOG00000012263)	ENSSTOG00000022469	STARD3NL (ENSSTOG00000014750)	EPDR1 (ENSSTOG00000024033)	SFRP4 (ENSSTOG00000012692)	NME8 (ENSSTOG00000014565)	GPR141 (ENSSTOG00000014563)
Alpin marmot	MODERN SPECIES	26	URGCP (ENSMMMG00000012282)	MRPS24 (ENSMMMG00000012279)	ENSMMMG00000012270	BLVRA (ENSMMMG00000012252)	ENSMMMG00000012217	STK17A (ENSMMMG00000012208)	ENSMMMG00000012200	HECW1 (ENSMMMG00000012160)	ENSMMMG00000012152	MRPL32 (ENSMMMG00000012145)	PSMA2 (ENSMMMG00000012134)	C7orf25 (ENSMMMG00000012127)	ENSMMMG00000012115	ENSMMMG00000012111	ENSMMMG00000012105	GLI3 (ENSMMMG00000012080) #22	INHBA (ENSMMMG00000012059) #23	SUGCT (ENSMMMG00000012046) #24	MPLKIP (ENSMMMG00000012038) #25	CDK13 (ENSMMMG00000012001) #26	ENSMMMG00000011996	RALA (ENSMMMG00000011989) #28	YAE1 (ENSMMMG00000011978) #29	ENSMMMG00000011962 #30	VPS41 (ENSMMMG00000011922)	ENSMMMG00000011913	AMPH (ENSMMMG00000011881)	ENSMMMG00000011878	ENSMMMG00000011872	ENSMMMG00000011859	ENSMMMG00000011847
Eurasian red squirrel	MODERN SPECIES	17	PGAM2 (ENSSVLG00005006699)	DBNL (ENSSVLG00005006493)	UBE2D4 (ENSSVLG00005006358)	ENSSVLG00005006336	URGCP (ENSSVLG00005006226)	MRPS24 (ENSSVLG00005006180)	ENSSVLG00005006086	BLVRA (ENSSVLG00005006049)	COA1 (ENSSVLG00005006028)	STK17A (ENSSVLG00005005990)	HECW1 (ENSSVLG00005005468)	ENSSVLG00005005320	MRPL32 (ENSSVLG00005005303)	PSMA2 (ENSSVLG00005005237)	C7orf25 (ENSSVLG00005005209)	GLI3 (ENSSVLG00005005178) #22	INHBA (ENSSVLG00005005151) #23	ENSSVLG00005005081	ENSSVLG00005005063	SUGCT (ENSSVLG00005004898) #24	MPLKIP (ENSSVLG00005004837) #25	ENSSVLG00005004818 #26	RALA (ENSSVLG00005004779) #28	YAE1 (ENSSVLG00005004760) #29	ENSSVLG00005023507	POU6F2 (ENSSVLG00005023305) #30	VPS41 (ENSSVLG00005023041)	AMPH (ENSSVLG00005022710)	ENSSVLG00005022644	TRGV9 (ENSSVLG00005022616)	ENSSVLG00005022603
Hystricomorpha	ANCESTRAL SPECIES	17									ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000155476
Hystricomorpha_a	ANCESTRAL SPECIES	16									ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000155476	ENSGT00940000161910
Hystricomorpha_b	ANCESTRAL SPECIES	55										ENSGT00390000011072	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Long-tailed chinchilla	MODERN SPECIES	167										BLVRA (ENSCLAG00000008524)	STK17A (ENSCLAG00000010347)	HECW1 (ENSCLAG00000011773)	MRPL32 (ENSCLAG00000016308)	PSMA2 (ENSCLAG00000006277)	C7orf25 (ENSCLAG00000006458)	GLI3 (ENSCLAG00000006524) #22	INHBA (ENSCLAG00000007192) #23	SUGCT (ENSCLAG00000007866) #24	ENSCLAG00000008555	MPLKIP (ENSCLAG00000011526) #25	ENSCLAG00000011577 #26	RALA (ENSCLAG00000006479) #28	YAE1 (ENSCLAG00000006572) #29	ENSCLAG00000006621 #30	ENSCLAG00000006744 #30	VPS41 (ENSCLAG00000007171)	AMPH (ENSCLAG00000004190)	ENSCLAG00000004875	ENSCLAG00000007481	ENSCLAG00000007605	ENSCLAG00000008044
Degu	MODERN SPECIES	72	ENSODEG00000008258	AVL9 (ENSODEG00000007683)	ENSODEG00000019886	ENSODEG00000008901	ENSODEG00000007193	ENSODEG00000007433	FKBP9 (ENSODEG00000008022)	NT5C3A (ENSODEG00000011094)	RP9 (ENSODEG00000009275)	BLVRA (ENSODEG00000007949)	STK17A (ENSODEG00000007337)	HECW1 (ENSODEG00000009462)	MRPL32 (ENSODEG00000008658)	ENSODEG00000008580	C7orf25 (ENSODEG00000019542)	GLI3 (ENSODEG00000008109) #22	INHBA (ENSODEG00000007905) #23	SUGCT (ENSODEG00000008687) #24	ENSODEG00000008104 #25	ENSODEG00000008309 #26	RALA (ENSODEG00000007864) #28	YAE1 (ENSODEG00000007300) #29	POU6F2 (ENSODEG00000009460) #30	ENSODEG00000007666	ENSODEG00000009633	AMPH (ENSODEG00000010210)	ENSODEG00000010348	ENSODEG00000009018	STARD3NL (ENSODEG00000007720)	EPDR1 (ENSODEG00000008299)	SFRP4 (ENSODEG00000008477)
Guinea pig	MODERN SPECIES	30	KBTBD2 (ENSCPOG00000035648)	RP9 (ENSCPOG00000040703)	FKBP9 (ENSCPOG00000019418)	NT5C3A (ENSCPOG00000013661)	ENSCPOG00000021798	BBS9 (ENSCPOG00000000935)	ENSCPOG00000023341	ENSCPOG00000023116	BLVRA (ENSCPOG00000008136)	ENSCPOG00000037130	STK17A (ENSCPOG00000012689)	HECW1 (ENSCPOG00000000176)	MRPL32 (ENSCPOG00000034853)	PSMA2 (ENSCPOG00000013134)	C7orf25 (ENSCPOG00000013131)	GLI3 (ENSCPOG00000013233) #22	ENSCPOG00000037187 #23	SUGCT (ENSCPOG00000009948) #24	MPLKIP (ENSCPOG00000037370) #25	ENSCPOG00000009938 #26	RALA (ENSCPOG00000037731) #28	YAE1 (ENSCPOG00000039885) #29	ENSCPOG00000036410 #30	ENSCPOG00000012221 #30	VPS41 (ENSCPOG00000006142)	AMPH (ENSCPOG00000006478)	ENSCPOG00000024186	STARD3NL (ENSCPOG00000004394)	EPDR1 (ENSCPOG00000032481)	SFRP4 (ENSCPOG00000010391)	NME8 (ENSCPOG00000010378)
Naked mole-rat female	MODERN SPECIES		VWC2 (ENSHGLG00000007717)	ZPBP (ENSHGLG00000041298)	ENSHGLG00000046389	ENSHGLG00000005101	ENSHGLG00000045050	ENSHGLG00000033925	FIGNL1 (ENSHGLG00000044622)	DDC (ENSHGLG00000017870)	GRB10 (ENSHGLG00000015464)	ENSHGLG00000033610	ENSHGLG00000015702	ENSHGLG00000037511	EGFR (ENSHGLG00000005749)	LANCL2 (ENSHGLG00000004769)	ENSHGLG00000033405	ENSHGLG00000038563 #22	ENSHGLG00000050582	INHBA (ENSHGLG00000041796) #23	SUGCT (ENSHGLG00000008015) #24	ENSHGLG00000040910	ENSHGLG00000038133	MPLKIP (ENSHGLG00000032456) #25	CDK13 (ENSHGLG00000014999) #26	RALA (ENSHGLG00000038221) #28	YAE1 (ENSHGLG00000010237) #29	ENSHGLG00000044208	POU6F2 (ENSHGLG00000041492) #30	VPS41 (ENSHGLG00000017533)	AMPH (ENSHGLG00000008101)	ENSHGLG00000049625	ENSHGLG00000048223
Laurasiatheria	ANCESTRAL SPECIES	29	ENSGT00530000063608.A	ENSGT00940000153253.b.a.h	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00950000185265
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155925 #22
Hedgehog	MODERN SPECIES	995																GLI3 (ENSEEUG00000011742) #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.a.a
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.a.f.f	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a	ENSGT00940000153143.a.b.b.a.b.d.b.b
Suina	ANCESTRAL SPECIES	19	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00940000161885	ENSGT00940000162364	ENSGT00940000162942	ENSGT00940000155153.B	ENSGT00940000161747	ENSGT00390000006211	ENSGT00940000162497
Chacoan peccary	MODERN SPECIES	898	CAMK2B (ENSCWAG00000005983)	YKT6 (ENSCWAG00000006096)	GCK (ENSCWAG00000006145)	MYL7 (ENSCWAG00000006252)	POLD2 (ENSCWAG00000006301)	AEBP1 (ENSCWAG00000006341)	POLM (ENSCWAG00000006436)	BLVRA (ENSCWAG00000006473)	COA1 (ENSCWAG00000006493)	STK17A (ENSCWAG00000006512)	ENSCWAG00000006541	HECW1 (ENSCWAG00000006585)	MRPL32 (ENSCWAG00000006907)	PSMA2 (ENSCWAG00000006930)	C7orf25 (ENSCWAG00000006982)	GLI3 (ENSCWAG00000006996) #22	INHBA (ENSCWAG00000007021) #23	SUGCT (ENSCWAG00000007038) #24	MPLKIP (ENSCWAG00000007188) #25	CDK13 (ENSCWAG00000007203) #26	RALA (ENSCWAG00000007246) #28	ENSCWAG00000007273 #29	POU6F2 (ENSCWAG00000007309) #30	VPS41 (ENSCWAG00000007522)	ZNF282 (ENSCWAG00000007766)	ENSCWAG00000007860	ZNF212 (ENSCWAG00000007892)	ZNF783 (ENSCWAG00000007923)	ZNF777 (ENSCWAG00000007946)	ZNF746 (ENSCWAG00000007990)	KRBA1 (ENSCWAG00000008095)
Pig	MODERN SPECIES	9	NUDCD3 (ENSSSCG00000016747)	CAMK2B (ENSSSCG00000039535)	YKT6 (ENSSSCG00000016750)	GCK (ENSSSCG00000016751)	POLD2 (ENSSSCG00000016753)	AEBP1 (ENSSSCG00000016754)	POLM (ENSSSCG00000016755)	BLVRA (ENSSSCG00000016756)	ENSSSCG00000027491	STK17A (ENSSSCG00000016758)	ENSSSCG00000040496	HECW1 (ENSSSCG00000036443)	ENSSSCG00000025060	PSMA2 (ENSSSCG00000039582)	C7orf25 (ENSSSCG00000016760)	GLI3 (ENSSSCG00000016763) #22	INHBA (ENSSSCG00000035077) #23	SUGCT (ENSSSCG00000035581) #24	MPLKIP (ENSSSCG00000016768) #25	CDK13 (ENSSSCG00000016769) #26	RALA (ENSSSCG00000048439) #28	YAE1 (ENSSSCG00000030497) #29	POU6F2 (ENSSSCG00000037764) #30	VPS41 (ENSSSCG00000016772)	ENSSSCG00000055672	ZNF212 (ENSSSCG00000016773)	ZNF783 (ENSSSCG00000031870)	ZNF777 (ENSSSCG00000016775)	ENSSSCG00000056306	KRBA1 (ENSSSCG00000034873)	ZNF467 (ENSSSCG00000039041)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.a.f.f	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a	ENSGT00940000153143.a.b.b.a.b.d.b.b
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.g	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a
Cetacea	ANCESTRAL SPECIES	13	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164.v.b	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.q	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00390000010089.e.a	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.g	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164.v.b	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.q	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00390000010089.e.a	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT01030000234518.E.c.b
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164.v.b	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.q	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182	ENSGT00940000154738.a	ENSGT00940000155419
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164.v.b	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.q	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00940000154937.n.b.a	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.g	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164.v.b	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.q	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00940000154937.n.b.a	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.g	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Beluga whale	MODERN SPECIES	17	NUDCD3 (ENSDLEG00000004533)	CAMK2B (ENSDLEG00000004510)	ENSDLEG00000004496	GCK (ENSDLEG00000004482)	MYL7 (ENSDLEG00000004466)	POLD2 (ENSDLEG00000004450)	AEBP1 (ENSDLEG00000004426)	POLM (ENSDLEG00000004372)	BLVRA (ENSDLEG00000004351)	COA1 (ENSDLEG00000004335)	STK17A (ENSDLEG00000004330)	HECW1 (ENSDLEG00000004308)	MRPL32 (ENSDLEG00000004297)	PSMA2 (ENSDLEG00000004285)	CUNH7orf25 (ENSDLEG00000004273)	GLI3 (ENSDLEG00000004234) #22	INHBA (ENSDLEG00000004199) #23	SUGCT (ENSDLEG00000004144) #24	MPLKIP (ENSDLEG00000004129) #25	CDK13 (ENSDLEG00000004120) #26	RALA (ENSDLEG00000004089) #28	YAE1D1 (ENSDLEG00000004079) #29	ENSDLEG00000004072	POU6F2 (ENSDLEG00000004053) #30	VPS41 (ENSDLEG00000004033)	AMPH (ENSDLEG00000004019)	TRGV9 (ENSDLEG00000004015)	ENSDLEG00000004009	STARD3NL (ENSDLEG00000003993)	EPDR1 (ENSDLEG00000003987)	SFRP4 (ENSDLEG00000003959)
Narwhal	MODERN SPECIES	306	NUDCD3 (ENSMMNG00015011532)	CAMK2B (ENSMMNG00015011629)	ENSMMNG00015011713	GCK (ENSMMNG00015011746)	MYL7 (ENSMMNG00015011775)	POLD2 (ENSMMNG00015011793)	AEBP1 (ENSMMNG00015011811)	POLM (ENSMMNG00015011889)	BLVRA (ENSMMNG00015011986)	COA1 (ENSMMNG00015012011)	STK17A (ENSMMNG00015012037)	HECW1 (ENSMMNG00015012084)	ENSMMNG00015012161	PSMA2 (ENSMMNG00015012176)	C7orf25 (ENSMMNG00015012199)	GLI3 (ENSMMNG00015012212) #22	INHBA (ENSMMNG00015012234) #23	SUGCT (ENSMMNG00015012249) #24	MPLKIP (ENSMMNG00015012269) #25	CDK13 (ENSMMNG00015012288) #26	RALA (ENSMMNG00015012334) #28	ENSMMNG00015012353	YAE1 (ENSMMNG00015012376) #29	POU6F2 (ENSMMNG00015012404) #30	ENSMMNG00015012432	VPS41 (ENSMMNG00015012514)	AMPH (ENSMMNG00015012588)	TRGV9 (ENSMMNG00015012603)	ENSMMNG00015012608	STARD3NL (ENSMMNG00015012620)	EPDR1 (ENSMMNG00015012643)
Vaquita	MODERN SPECIES	20	NUDCD3 (ENSPSNG00000008964)	CAMK2B (ENSPSNG00000007662)	ENSPSNG00000007311	GCK (ENSPSNG00000007079)	MYL7 (ENSPSNG00000006995)	POLD2 (ENSPSNG00000006941)	AEBP1 (ENSPSNG00000006807)	POLM (ENSPSNG00000006694)	BLVRA (ENSPSNG00000006663)	ENSPSNG00000006640	STK17A (ENSPSNG00000006610)	HECW1 (ENSPSNG00000006347)	ENSPSNG00000006232	PSMA2 (ENSPSNG00000006196)	C7orf25 (ENSPSNG00000006173)	GLI3 (ENSPSNG00000006154) #22	INHBA (ENSPSNG00000006133) #23	SUGCT (ENSPSNG00000006038) #24	MPLKIP (ENSPSNG00000005962) #25	CDK13 (ENSPSNG00000005890) #26	RALA (ENSPSNG00000005824) #28	ENSPSNG00000005805	YAE1 (ENSPSNG00000005783) #29	ENSPSNG00000005765	POU6F2 (ENSPSNG00000005694) #30	VPS41 (ENSPSNG00000005623)	AMPH (ENSPSNG00000005476)	TRGV9 (ENSPSNG00000005429)	ENSPSNG00000005418	STARD3NL (ENSPSNG00000005380)	EPDR1 (ENSPSNG00000005343)
Dolphin	MODERN SPECIES	1135																GLI3 (ENSTTRG00000003628) #22	INHBA (ENSTTRG00000003627) #23	SUGCT (ENSTTRG00000003626) #24	MPLKIP (ENSTTRG00000003625) #25	CDK13 (ENSTTRG00000003620) #26
Sperm whale	MODERN SPECIES	16	ENSPCTG00005006814	ENSPCTG00005006010	ENSPCTG00005005920	CAMK2B (ENSPCTG00005005842)	YKT6 (ENSPCTG00005005767)	GCK (ENSPCTG00005005671)	MYL7 (ENSPCTG00005005606)	POLD2 (ENSPCTG00005005587)	AEBP1 (ENSPCTG00005005498)	BLVRA (ENSPCTG00005005350)	COA1 (ENSPCTG00005005324)	STK17A (ENSPCTG00005005297)	HECW1 (ENSPCTG00005004997)	MRPL32 (ENSPCTG00005004935)	PSMA2 (ENSPCTG00005004869)	GLI3 (ENSPCTG00005004827) #22	INHBA (ENSPCTG00005004805) #23	ENSPCTG00005004799	SUGCT (ENSPCTG00005004779) #24	MPLKIP (ENSPCTG00005004756) #25	CDK13 (ENSPCTG00005004628) #26	RALA (ENSPCTG00005004575) #28	ENSPCTG00005004553	YAE1 (ENSPCTG00005004539) #29	ENSPCTG00005004517 #30	ENSPCTG00005004493	VPS41 (ENSPCTG00005004357)	AMPH (ENSPCTG00005004186)	TRGV9 (ENSPCTG00005004157)	ENSPCTG00005004146	STARD3NL (ENSPCTG00005004119)
Blue whale	MODERN SPECIES	20	YKT6 (ENSBMSG00010008716)	GCK (ENSBMSG00010008656)	MYL7 (ENSBMSG00010008630)	POLD2 (ENSBMSG00010008600)	AEBP1 (ENSBMSG00010008578)	POLM (ENSBMSG00010008448)	ENSBMSG00010008391	BLVRA (ENSBMSG00010008368)	COA1 (ENSBMSG00010008357)	STK17A (ENSBMSG00010008340)	HECW1 (ENSBMSG00010008240)	ENSBMSG00010008222	ENSBMSG00010008215	PSMA2 (ENSBMSG00010008200)	C7orf25 (ENSBMSG00010008192)	GLI3 (ENSBMSG00010008182) #22	INHBA (ENSBMSG00010008174) #23	ENSBMSG00010008170	SUGCT (ENSBMSG00010008128) #24	MPLKIP (ENSBMSG00010008105) #25	CDK13 (ENSBMSG00010008022) #26	RALA (ENSBMSG00010007998) #28	ENSBMSG00010007978 #29	ENSBMSG00010007967	POU6F2 (ENSBMSG00010007920) #30	VPS41 (ENSBMSG00010007891)	AMPH (ENSBMSG00010007773)	TRGV9 (ENSBMSG00010007735)	ENSBMSG00010007727	ENSBMSG00010007675	STARD3NL (ENSBMSG00010007649)
Pecora	ANCESTRAL SPECIES	11	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Percora_a	ANCESTRAL SPECIES	11	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Bovidae	ANCESTRAL SPECIES	12	ENSGT00390000015164.s	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT01100000263600	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216	ENSGT00940000157480
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000158973.b	ENSGT00390000015164.s	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT01100000263600	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000159695.h	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000155472.a.a	ENSGT00510000047764	ENSGT00940000156619	ENSGT00390000015216
Bos	ANCESTRAL SPECIES	8	ENSGT00390000015164.s	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT01100000263600	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000153362.a.cb.a.b.a	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000159695.h	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000156821.p.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a
Bos_b	ANCESTRAL SPECIES	7	ENSGT00940000158973.b	ENSGT00390000015164.s.a	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000153362.a.cb.a.b.a	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000159695.h	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a
Cow	MODERN SPECIES	23	NUDCD3 (ENSBTAG00000006325)	CAMK2B (ENSBTAG00000012653)	YKT6 (ENSBTAG00000000274)	GCK (ENSBTAG00000032288)	MYL7 (ENSBTAG00000002066)	POLD2 (ENSBTAG00000012241)	AEBP1 (ENSBTAG00000012237)	POLM (ENSBTAG00000007796)	BLVRA (ENSBTAG00000013414)	COA1 (ENSBTAG00000012968)	STK17A (ENSBTAG00000008143)	HECW1 (ENSBTAG00000021216)	MRPL32 (ENSBTAG00000000991)	PSMA2 (ENSBTAG00000000990)	C4H7orf25 (ENSBTAG00000009472)	GLI3 (ENSBTAG00000010671) #22	INHBA (ENSBTAG00000048508) #23	ENSBTAG00000053253	SUGCT (ENSBTAG00000032121) #24	MPLKIP (ENSBTAG00000018715) #25	CDK13 (ENSBTAG00000001528) #26	ENSBTAG00000054825	RALA (ENSBTAG00000006661) #28	YAE1 (ENSBTAG00000001892) #29	POU6F2 (ENSBTAG00000013648) #30	VPS41 (ENSBTAG00000007305)	AMPH (ENSBTAG00000031967)	ENSBTAG00000000144	ENSBTAG00000053474	ENSBTAG00000055254	ENSBTAG00000002859
Hybrid Bos Indicus	MODERN SPECIES	23	CAMK2B (ENSBIXG00005019061)	ENSBIXG00005003122	ENSBIXG00005003126	GCK (ENSBIXG00005019239)	MYL7 (ENSBIXG00005019279)	AEBP1 (ENSBIXG00005019312)	POLD2 (ENSBIXG00005019352)	POLM (ENSBIXG00005005521)	BLVRA (ENSBIXG00005003157)	ENSBIXG00005006146	HECW1 (ENSBIXG00005019608)	MRPL32 (ENSBIXG00005019681)	PSMA2 (ENSBIXG00005007827)	C7orf25 (ENSBIXG00005019735)	ENSBIXG00005006253	GLI3 (ENSBIXG00005019847) #22	INHBA (ENSBIXG00005019918) #23	ENSBIXG00005019940	SUGCT (ENSBIXG00005003265) #24	MPLKIP (ENSBIXG00005020016) #25	CDK13 (ENSBIXG00005020092) #26	ENSBIXG00005020109	ENSBIXG00005020124	RALA (ENSBIXG00005020138) #28	YAE1 (ENSBIXG00005005866) #29	POU6F2 (ENSBIXG00005020231) #30	VPS41 (ENSBIXG00005020347)	ENSBIXG00005020415	AMPH (ENSBIXG00005020476)	ENSBIXG00005006259	ENSBIXG00005020518
Bos_a	ANCESTRAL SPECIES	12	ENSGT00390000015164.s	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT01100000263600	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000153362.a.cb.a.b.a	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000159695.h	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000156821.p.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a
Wild yak	MODERN SPECIES	1134																ENSBMUG00000020007 #22	ENSBMUG00000020073	ENSBMUG00000020333
Domestic yak	MODERN SPECIES	23	YKT6 (ENSBGRG00000012169)	GCK (ENSBGRG00000011827)	ENSBGRG00000011683	POLD2 (ENSBGRG00000011507)	AEBP1 (ENSBGRG00000011094)	POLM (ENSBGRG00000010989)	BLVRA (ENSBGRG00000010875)	ENSBGRG00000010681	STK17A (ENSBGRG00000010569)	ENSBGRG00000010541	HECW1 (ENSBGRG00000010187)	MRPL32 (ENSBGRG00000010055)	ENSBGRG00000009970	C7orf25 (ENSBGRG00000009953)	ENSBGRG00000009871	GLI3 (ENSBGRG00000009720) #22	INHBA (ENSBGRG00000009678) #23	ENSBGRG00000009661	SUGCT (ENSBGRG00000009489) #24	MPLKIP (ENSBGRG00000009446) #25	CDK13 (ENSBGRG00000009206) #26	ENSBGRG00000009155	RALA (ENSBGRG00000009084) #28	YAE1 (ENSBGRG00000009045) #29	POU6F2 (ENSBGRG00000008844) #30	VPS41 (ENSBGRG00000008270)	AMPH (ENSBGRG00000007825)	ENSBGRG00000007791	ENSBGRG00000007724	ENSBGRG00000007684	ENSBGRG00000007662
American bison	MODERN SPECIES	3354	CAMK2B (ENSBBBG00000017918)	YKT6 (ENSBBBG00000016921)	GCK (ENSBBBG00000004174)	MYL7 (ENSBBBG00000016836)	POLD2 (ENSBBBG00000004159)	AEBP1 (ENSBBBG00000016760)	POLM (ENSBBBG00000016689)	BLVRA (ENSBBBG00000016667)	COA1 (ENSBBBG00000016648)	STK17A (ENSBBBG00000016637)	HECW1 (ENSBBBG00000016613)	ENSBBBG00000016533	MRPL32 (ENSBBBG00000007141)	PSMA2 (ENSBBBG00000007372)	C7orf25 (ENSBBBG00000016430)	GLI3 (ENSBBBG00000016416) #22	ENSBBBG00000016287	INHBA (ENSBBBG00000016277) #23	SUGCT (ENSBBBG00000016251) #24	MPLKIP (ENSBBBG00000016185) #25	CDK13 (ENSBBBG00000004014) #26	ENSBBBG00000016104	ENSBBBG00000016100	ENSBBBG00000016096	ENSBBBG00000016085	RALA (ENSBBBG00000016078) #28	YAE1 (ENSBBBG00000016071) #29	POU6F2 (ENSBBBG00000007418) #30	VPS41 (ENSBBBG00000016003)	ENSBBBG00000015915	AMPH (ENSBBBG00000015904)
Caprinae	ANCESTRAL SPECIES	10	ENSGT00390000015164.s	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072.c.a	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT01100000263600	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00950000185265
Goat	MODERN SPECIES	23	ENSCHIG00000026885	GCK (ENSCHIG00000015555)	MYL7 (ENSCHIG00000022014)	POLD2 (ENSCHIG00000009706)	AEBP1 (ENSCHIG00000019312)	POLM (ENSCHIG00000022903)	ENSCHIG00000019345	COA1 (ENSCHIG00000025366)	STK17A (ENSCHIG00000012894)	ENSCHIG00000022757	HECW1 (ENSCHIG00000018639)	MRPL32 (ENSCHIG00000026167)	ENSCHIG00000012524	C7orf25 (ENSCHIG00000009068)	ENSCHIG00000012804	GLI3 (ENSCHIG00000015297) #22	INHBA (ENSCHIG00000025901) #23	SUGCT (ENSCHIG00000017599) #24	MPLKIP (ENSCHIG00000021871) #25	ENSCHIG00000022322	CDK13 (ENSCHIG00000022113) #26	RALA (ENSCHIG00000013549) #28	YAE1 (ENSCHIG00000016002) #29	ENSCHIG00000016882 #30	ENSCHIG00000020600 #30	VPS41 (ENSCHIG00000005959)	ENSCHIG00000011903	AMPH (ENSCHIG00000020495)	ENSCHIG00000013794	ENSCHIG00000018076	ENSCHIG00000007301
Rambouillet Sheep	MODERN SPECIES	20	GCK (ENSOARG00020008181)	MYL7 (ENSOARG00020008661)	POLD2 (ENSOARG00020008736)	AEBP1 (ENSOARG00020008818)	BLVRA (ENSOARG00020008976)	ENSOARG00020009019	COA1 (ENSOARG00020009061)	STK17A (ENSOARG00020009115)	ENSOARG00020009157	HECW1 (ENSOARG00020009226)	ENSOARG00020010002	MRPL32 (ENSOARG00020010057)	ENSOARG00020010111	C7orf25 (ENSOARG00020010245)	ENSOARG00020010281	GLI3 (ENSOARG00020010338) #22	ENSOARG00020000108	INHBA (ENSOARG00020000159) #23	SUGCT (ENSOARG00020000282) #24	MPLKIP (ENSOARG00020000391) #25	CDK13 (ENSOARG00020000425) #26	RALA (ENSOARG00020000572) #28	ENSOARG00020000581 #29	POU6F2 (ENSOARG00020000606) #30	VPS41 (ENSOARG00020000815)	AMPH (ENSOARG00020001336)	ENSOARG00020001937	ENSOARG00020001954	ENSOARG00020001968	ENSOARG00020001983	ENSOARG00020002001
Siberian musk deer	MODERN SPECIES	87	GCK (ENSMMSG00000010554)	MYL7 (ENSMMSG00000010461)	POLD2 (ENSMMSG00000010417)	AEBP1 (ENSMMSG00000010337)	POLM (ENSMMSG00000010267)	BLVRA (ENSMMSG00000010224)	COA1 (ENSMMSG00000010212)	STK17A (ENSMMSG00000010195)	ENSMMSG00000010172	HECW1 (ENSMMSG00000009873)	ENSMMSG00000009803	ENSMMSG00000009775	MRPL32 (ENSMMSG00000009758)	PSMA2 (ENSMMSG00000009746)	C7orf25 (ENSMMSG00000009736)	GLI3 (ENSMMSG00000009711) #22	ENSMMSG00000009697	INHBA (ENSMMSG00000009680) #23	SUGCT (ENSMMSG00000009548) #24	MPLKIP (ENSMMSG00000009516) #25	CDK13 (ENSMMSG00000009356) #26	RALA (ENSMMSG00000009317) #28	YAE1 (ENSMMSG00000009286) #29	ENSMMSG00000009247	POU6F2 (ENSMMSG00000009061) #30	VPS41 (ENSMMSG00000008890)
Yarkand deer	MODERN SPECIES	9	YKT6 (ENSCHYG00000019044)	GCK (ENSCHYG00000019315)	MYL7 (ENSCHYG00000019693)	POLD2 (ENSCHYG00000019805)	AEBP1 (ENSCHYG00000019970)	POLM (ENSCHYG00000020114)	ENSCHYG00000020306	ENSCHYG00000020384	STK17A (ENSCHYG00000020545)	HECW1 (ENSCHYG00000020708)	MRPL32 (ENSCHYG00000021557)	PSMA2 (ENSCHYG00000021589)	C7orf25 (ENSCHYG00000021701)	ENSCHYG00000021719	ENSCHYG00000021751	GLI3 (ENSCHYG00000021798) #22	INHBA (ENSCHYG00000022041) #23	ENSCHYG00000022091	SUGCT (ENSCHYG00000022125) #24	ENSCHYG00000022424	ENSCHYG00000022441	MPLKIP (ENSCHYG00000022483) #25	CDK13 (ENSCHYG00000022509) #26	RALA (ENSCHYG00000022661) #28	YAE1 (ENSCHYG00000022705) #29	POU6F2 (ENSCHYG00000022756) #30	VPS41 (ENSCHYG00000023031)	AMPH (ENSCHYG00000023423)	ENSCHYG00000023515	TRGV9 (ENSCHYG00000023546)	ENSCHYG00000023578
Camelidae	ANCESTRAL SPECIES	2	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000015164	ENSGT00950000182787.E.d.e.b	ENSGT00940000161682	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.a.f.f	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b	ENSGT00940000155476	ENSGT00940000161910
Alpaca	MODERN SPECIES	148																ENSVPAG00000000048 #22	INHBA (ENSVPAG00000000046) #23
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	33	NPC1L1 (ENSCDRG00005003185)	NUDCD3 (ENSCDRG00005003287)	CAMK2B (ENSCDRG00005003656)	YKT6 (ENSCDRG00005009780)	GCK (ENSCDRG00005009900)	MYL7 (ENSCDRG00005010225)	POLD2 (ENSCDRG00005010307)	AEBP1 (ENSCDRG00005010388)	POLM (ENSCDRG00005010471)	BLVRA (ENSCDRG00005010641)	COA1 (ENSCDRG00005010728)	ENSCDRG00005010848	HECW1 (ENSCDRG00005010909)	MRPL32 (ENSCDRG00005011105)	C7orf25 (ENSCDRG00005011146)	ENSCDRG00005011309 #22	GLI3 (ENSCDRG00005011370) #22	INHBA (ENSCDRG00005011609) #23	SUGCT (ENSCDRG00005011669) #24	MPLKIP (ENSCDRG00005012010) #25	CDK13 (ENSCDRG00005012070) #26	RALA (ENSCDRG00005012560) #28	YAE1 (ENSCDRG00005012620) #29	ENSCDRG00005012656 #30	VPS41 (ENSCDRG00005012696)	AMPH (ENSCDRG00005012906)	TRGV9 (ENSCDRG00005013028)	ENSCDRG00005013064	ENSCDRG00005013075	ENSCDRG00005013102	STARD3NL (ENSCDRG00005013129)
Arabian camel	MODERN SPECIES	33	NUDCD3 (ENSCDRG00005003287)	CAMK2B (ENSCDRG00005003656)	YKT6 (ENSCDRG00005009780)	GCK (ENSCDRG00005009900)	MYL7 (ENSCDRG00005010225)	POLD2 (ENSCDRG00005010307)	AEBP1 (ENSCDRG00005010388)	POLM (ENSCDRG00005010471)	BLVRA (ENSCDRG00005010641)	COA1 (ENSCDRG00005010728)	ENSCDRG00005010848	HECW1 (ENSCDRG00005010909)	MRPL32 (ENSCDRG00005011105)	C7orf25 (ENSCDRG00005011146)	ENSCDRG00005011309 #22	GLI3 (ENSCDRG00005011370) #22	INHBA (ENSCDRG00005011609) #23	SUGCT (ENSCDRG00005011669) #24	MPLKIP (ENSCDRG00005012010) #25	CDK13 (ENSCDRG00005012070) #26	RALA (ENSCDRG00005012560) #28	YAE1 (ENSCDRG00005012620) #29	ENSCDRG00005012656 #30	VPS41 (ENSCDRG00005012696)	AMPH (ENSCDRG00005012906)	TRGV9 (ENSCDRG00005013028)	ENSCDRG00005013064	ENSCDRG00005013075	ENSCDRG00005013102	STARD3NL (ENSCDRG00005013129)	EPDR1 (ENSCDRG00005013212)
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.b
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Equus	ANCESTRAL SPECIES	57	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996.u	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.f.c.a.a.a.a.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000153143.a.a.f.c.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.i.b	ENSGT00940000153143.a.a.f.c.a.a.a.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b.b
Donkey	MODERN SPECIES		POLD2 (ENSEASG00005017741)	AEBP1 (ENSEASG00005017728)	POLM (ENSEASG00005017723)	PGAM2 (ENSEASG00005017720)	DBNL (ENSEASG00005017717)	UBE2D4 (ENSEASG00005017715)	URGCP (ENSEASG00005017713)	MRPS24 (ENSEASG00005030446)	BLVRA (ENSEASG00005017707)	COA1 (ENSEASG00005029281)	STK17A (ENSEASG00005017699)	HECW1 (ENSEASG00005017685)	ENSEASG00005027314	PSMA2 (ENSEASG00005017678)	C7orf25 (ENSEASG00005017675)	GLI3 (ENSEASG00005017667) #22	INHBA (ENSEASG00005029952) #23	SUGCT (ENSEASG00005017649) #24	MPLKIP (ENSEASG00005017642) #25	CDK13 (ENSEASG00005017623) #26	ENSEASG00005036227	RALA (ENSEASG00005017614) #28	YAE1 (ENSEASG00005017612) #29	POU6F2 (ENSEASG00005017610) #30	ENSEASG00005027728	ENSEASG00005017606	AMPH (ENSEASG00005017588)	ENSEASG00005032514	ENSEASG00005027212	ENSEASG00005024703	ENSEASG00005024515
Horse	MODERN SPECIES	25	AEBP1 (ENSECAG00000019884)	POLM (ENSECAG00000013117)	PGAM2 (ENSECAG00000046525)	DBNL (ENSECAG00000012048)	UBE2D4 (ENSECAG00000019978)	URGCP (ENSECAG00000017344)	MRPS24 (ENSECAG00000014621)	ENSECAG00000009786	BLVRA (ENSECAG00000011650)	COA1 (ENSECAG00000011136)	STK17A (ENSECAG00000006915)	HECW1 (ENSECAG00000010537)	PSMA2 (ENSECAG00000020597)	ENSECAG00000009052	C4H7orf25 (ENSECAG00000002284)	GLI3 (ENSECAG00000009281) #22	INHBA (ENSECAG00000022448) #23	SUGCT (ENSECAG00000020946) #24	MPLKIP (ENSECAG00000033876) #25	CDK13 (ENSECAG00000017341) #26	ENSECAG00000043932	ENSECAG00000051072	RALA (ENSECAG00000017044) #28	YAE1 (ENSECAG00000014499) #29	POU6F2 (ENSECAG00000013209) #30	VPS41 (ENSECAG00000006943)	AMPH (ENSECAG00000004135)	ENSECAG00000050978	ENSECAG00000038560	ENSECAG00000059202	ENSECAG00000036132
Chiroptera	ANCESTRAL SPECIES	24										ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000155476	ENSGT00940000161910
Microchiroptera	ANCESTRAL SPECIES	24										ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b.cb.a	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000155476	ENSGT00940000161910
Greater horseshoe bat	MODERN SPECIES	12										BLVRA (ENSRFEG00010020740)	COA1 (ENSRFEG00010020716)	HECW1 (ENSRFEG00010020668)	ENSRFEG00010020602	PSMA2 (ENSRFEG00010020543)	C7orf25 (ENSRFEG00010020516)	GLI3 (ENSRFEG00010020493) #22	INHBA (ENSRFEG00010020467) #23	SUGCT (ENSRFEG00010020366) #24	MPLKIP (ENSRFEG00010020336) #25	CDK13 (ENSRFEG00010020169) #26	RALA (ENSRFEG00010020134) #28	YAE1 (ENSRFEG00010020105) #29	POU6F2 (ENSRFEG00010019962) #30	ENSRFEG00010019906	VPS41 (ENSRFEG00010019744)	AMPH (ENSRFEG00010019645)	ENSRFEG00010019577	ENSRFEG00010019565	ENSRFEG00010019552	ENSRFEG00010019509	ENSRFEG00010019499
Microbat	MODERN SPECIES	955	FKBP9 (ENSMLUG00000005524)	ENSMLUG00000023079	KBTBD2 (ENSMLUG00000005395)	AVL9 (ENSMLUG00000001155)	ZNF862 (ENSMLUG00000011313)	ATP6V0E2 (ENSMLUG00000029276)	LRRC61 (ENSMLUG00000005795)	RARRES2 (ENSMLUG00000005796)	ENSMLUG00000024808	GIMAP8 (ENSMLUG00000012405)	HECW1 (ENSMLUG00000003954)	MRPL32 (ENSMLUG00000010108)	ENSMLUG00000010086	C7orf25 (ENSMLUG00000010080)	ENSMLUG00000027695	GLI3 (ENSMLUG00000015711) #22	INHBA (ENSMLUG00000015706) #23	SUGCT (ENSMLUG00000003940) #24	ENSMLUG00000027675	ENSMLUG00000030645 #25	CDK13 (ENSMLUG00000017326) #26	RALA (ENSMLUG00000009687) #28	ENSMLUG00000024824	YAE1 (ENSMLUG00000002704) #29	ENSMLUG00000002698 #30	VPS41 (ENSMLUG00000008811)	AMPH (ENSMLUG00000009337)	ENSMLUG00000027596	ENSMLUG00000022442	ENSMLUG00000025893	ENSMLUG00000022304
Megabat	MODERN SPECIES	3879																GLI3 (ENSPVAG00000015920) #22
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000153143.a.b.b.b
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.tb	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00390000006350.m.b.l	ENSGT01010000227741	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a	ENSGT00940000155476	ENSGT00940000164413
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.tb	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00390000006350.m.b.l	ENSGT01010000227741	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319.tb	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00390000006350.m.b.l	ENSGT01010000227741	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a
leopard	MODERN SPECIES	20	ENSPPRG00000004045	ENSPPRG00000002561	VSTM2A (ENSPPRG00000002498)	ENSPPRG00000001760	EGFR (ENSPPRG00000000798)	LANCL2 (ENSPPRG00000024925)	VOPP1 (ENSPPRG00000024967)	BLVRA (ENSPPRG00000015157)	ENSPPRG00000014621	STK17A (ENSPPRG00000013907)	HECW1 (ENSPPRG00000013400)	MRPL32 (ENSPPRG00000011233)	PSMA2 (ENSPPRG00000011046)	C7orf25 (ENSPPRG00000010249)	ENSPPRG00000010031	GLI3 (ENSPPRG00000009937) #22	INHBA (ENSPPRG00000009179) #23	SUGCT (ENSPPRG00000007612) #24	ENSPPRG00000005409	ENSPPRG00000004981 #25	CDK13 (ENSPPRG00000004607) #26	ENSPPRG00000002725	RALA (ENSPPRG00000001413) #28	YAE1 (ENSPPRG00000000795) #29	POU6F2 (ENSPPRG00000000448) #30	VPS41 (ENSPPRG00000023241)	AMPH (ENSPPRG00000018727)	ENSPPRG00000013366	ENSPPRG00000011849	ENSPPRG00000011214	ENSPPRG00000010408
lion	MODERN SPECIES	2	DDC (ENSPLOG00000009679)	GRB10 (ENSPLOG00000010028)	ENSPLOG00000010143	VSTM2A (ENSPLOG00000010335)	ENSPLOG00000010418	EGFR (ENSPLOG00000010535)	LANCL2 (ENSPLOG00000011084)	VOPP1 (ENSPLOG00000011205)	BLVRA (ENSPLOG00000011346)	ENSPLOG00000011414	STK17A (ENSPLOG00000011441)	HECW1 (ENSPLOG00000011517)	MRPL32 (ENSPLOG00000011953)	PSMA2 (ENSPLOG00000012010)	C7orf25 (ENSPLOG00000012077)	GLI3 (ENSPLOG00000012098) #22	INHBA (ENSPLOG00000012325) #23	SUGCT (ENSPLOG00000012382) #24	MPLKIP (ENSPLOG00000012761) #25	CDK13 (ENSPLOG00000012792) #26	ENSPLOG00000012926	ENSPLOG00000012991	RALA (ENSPLOG00000013111) #28	YAE1 (ENSPLOG00000013140) #29	POU6F2 (ENSPLOG00000013191) #30	VPS41 (ENSPLOG00000013425)	AMPH (ENSPLOG00000013547)	ENSPLOG00000013911	ENSPLOG00000013936	ENSPLOG00000014034	ENSPLOG00000014062
Tiger	MODERN SPECIES	484	IKZF1 (ENSPTIG00000011482)	DDC (ENSPTIG00000012235)	GRB10 (ENSPTIG00000013185)	ENSPTIG00000014777	VSTM2A (ENSPTIG00000015114)	ENSPTIG00000015657	EGFR (ENSPTIG00000015949)	LANCL2 (ENSPTIG00000017744)	VOPP1 (ENSPTIG00000017875)	BLVRA (ENSPTIG00000018409)	STK17A (ENSPTIG00000018723)	HECW1 (ENSPTIG00000018862)	MRPL32 (ENSPTIG00000019413)	PSMA2 (ENSPTIG00000019642)	C7orf25 (ENSPTIG00000019732)	ENSPTIG00000019835 #22	INHBA (ENSPTIG00000019931) #23	SUGCT (ENSPTIG00000019973) #24	MPLKIP (ENSPTIG00000020797) #25	ENSPTIG00000001053 #26	RALA (ENSPTIG00000004587) #28	YAE1 (ENSPTIG00000004957) #29	POU6F2 (ENSPTIG00000005482) #30	VPS41 (ENSPTIG00000007310)	AMPH (ENSPTIG00000008766)	ENSPTIG00000010636	ENSPTIG00000011074	ENSPTIG00000011171	ENSPTIG00000011341
Cat	MODERN SPECIES	1	VSTM2A (ENSFCAG00000003204)	ENSFCAG00000032978	EGFR (ENSFCAG00000015468)	LANCL2 (ENSFCAG00000027536)	VOPP1 (ENSFCAG00000037032)	BLVRA (ENSFCAG00000026122)	ENSFCAG00000047953	ENSFCAG00000048002	ENSFCAG00000049450	ENSFCAG00000039405	STK17A (ENSFCAG00000006138)	HECW1 (ENSFCAG00000010375)	MRPL32 (ENSFCAG00000041230)	PSMA2 (ENSFCAG00000023349)	CA2H7orf25 (ENSFCAG00000013690)	GLI3 (ENSFCAG00000011989) #22	INHBA (ENSFCAG00000010866) #23	SUGCT (ENSFCAG00000010258) #24	MPLKIP (ENSFCAG00000036429) #25	CDK13 (ENSFCAG00000010257) #26	ENSFCAG00000033905	ENSFCAG00000048602	RALA (ENSFCAG00000025425) #28	YAE1 (ENSFCAG00000027937) #29	POU6F2 (ENSFCAG00000035781) #30	VPS41 (ENSFCAG00000019210)	AMPH (ENSFCAG00000003529)	TRG (ENSFCAG00000050998)	ENSFCAG00000023786	ENSFCAG00000035027	ENSFCAG00000039973
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.a.a	ENSGT00940000153143.a.b.b.b
Canidae	ANCESTRAL SPECIES	54	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00390000001376.db.g	ENSGT00390000008294.e.b.a.a	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.e	ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.b	ENSGT00940000153143.a.b.b.b
Canis_lupus	ANCESTRAL SPECIES	45	ENSGT00530000063608.A	ENSGT00940000168023	ENSGT01090000260040.a.a.b.ec	ENSGT00940000160556	ENSGT00390000001319.qb	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00390000001376.db.g.g	ENSGT00390000008294.e.b.a.a	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.h	ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a
Dingo	MODERN SPECIES	103	ENSCAFG00020024181	ENSCAFG00020024178	ENSCAFG00020024176	VSTM2A (ENSCAFG00020024172)	ENSCAFG00020024170	EGFR (ENSCAFG00020023672)	LANCL2 (ENSCAFG00020023610)	VOPP1 (ENSCAFG00020023604)	BLVRA (ENSCAFG00020023597)	COA1 (ENSCAFG00020023593)	STK17A (ENSCAFG00020023589)	HECW1 (ENSCAFG00020023579)	MRPL32 (ENSCAFG00020023577)	PSMA2 (ENSCAFG00020023566)	C7orf25 (ENSCAFG00020023562)	GLI3 (ENSCAFG00020023540) #22	INHBA (ENSCAFG00020023530) #23	ENSCAFG00020023526	SUGCT (ENSCAFG00020023498) #24	MPLKIP (ENSCAFG00020023490) #25	CDK13 (ENSCAFG00020023450) #26	ENSCAFG00020023440	RALA (ENSCAFG00020023437) #28	YAE1 (ENSCAFG00020023432) #29	ENSCAFG00020023429	POU6F2 (ENSCAFG00020023412) #30	VPS41 (ENSCAFG00020023396)	AMPH (ENSCAFG00020023336)	ENSCAFG00020023317	ENSCAFG00020023314	ENSCAFG00020023310
Dog	MODERN SPECIES	9	ENSCAFG00845011149	ENSCAFG00845011171	VSTM2A (ENSCAFG00845011213)	SEC61G (ENSCAFG00845011317)	EGFR (ENSCAFG00845011396)	LANCL2 (ENSCAFG00845011534)	ENSCAFG00845011646	BLVRA (ENSCAFG00845011746)	COA1 (ENSCAFG00845011827)	STK17A (ENSCAFG00845011865)	HECW1 (ENSCAFG00845017152)	ENSCAFG00845017883	MRPL32 (ENSCAFG00845017918)	PSMA2 (ENSCAFG00845017988)	C18H7orf25 (ENSCAFG00845018090)	GLI3 (ENSCAFG00845018240) #22	INHBA (ENSCAFG00845018632) #23	ENSCAFG00845018696	SUGCT (ENSCAFG00845018864) #24	MPLKIP (ENSCAFG00845019316) #25	CDK13 (ENSCAFG00845019359) #26	RALA (ENSCAFG00845019538) #28	YAE1 (ENSCAFG00845019598) #29	POU6F2 (ENSCAFG00845019684) #30	ENSCAFG00845019954	VPS41 (ENSCAFG00845020061)	AMPH (ENSCAFG00845020583)	ENSCAFG00845021281	ENSCAFG00845021399	ENSCAFG00845021625	ENSCAFG00845021676
Red fox	MODERN SPECIES	60	ENSVVUG00000009985	ENSVVUG00000009930	VSTM2A (ENSVVUG00000009907)	SEC61G (ENSVVUG00000009901)	EGFR (ENSVVUG00000009879)	LANCL2 (ENSVVUG00000009848)	VOPP1 (ENSVVUG00000009822)	BLVRA (ENSVVUG00000009819)	COA1 (ENSVVUG00000009797)	STK17A (ENSVVUG00000009792)	ENSVVUG00000009786	HECW1 (ENSVVUG00000006733)	MRPL32 (ENSVVUG00000006632)	PSMA2 (ENSVVUG00000006556)	CUNH7orf25 (ENSVVUG00000006554)	GLI3 (ENSVVUG00000006139) #22	INHBA (ENSVVUG00000006107) #23	ENSVVUG00000006098	ENSVVUG00000006053	SUGCT (ENSVVUG00000005947) #24	MPLKIP (ENSVVUG00000005927) #25	CDK13 (ENSVVUG00000005637) #26	ENSVVUG00000005608	RALA (ENSVVUG00000005586) #28	YAE1 (ENSVVUG00000005580) #29	ENSVVUG00000005573 #30	ENSVVUG00000005547	ENSVVUG00000005535	VPS41 (ENSVVUG00000005485)	AMPH (ENSVVUG00000005432)	ENSVVUG00000005411
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.a.a	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Mustelinae	ANCESTRAL SPECIES	85	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00900000143452	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a
American mink	MODERN SPECIES	380																GLI3 (ENSNVIG00000024274) #22	INHBA (ENSNVIG00000024272) #23	ENSNVIG00000024270
Ferret	MODERN SPECIES	165	DDC (ENSMPUG00000018159)	GRB10 (ENSMPUG00000018158)	COBL (ENSMPUG00000018157)	VSTM2A (ENSMPUG00000018155)	SEC61G (ENSMPUG00000018154)	EGFR (ENSMPUG00000018153)	LANCL2 (ENSMPUG00000018152)	VOPP1 (ENSMPUG00000018151)	BLVRA (ENSMPUG00000018150)	COA1 (ENSMPUG00000018149)	STK17A (ENSMPUG00000018148)	ENSMPUG00000018147	ENSMPUG00000018146	PSMA2 (ENSMPUG00000018145)	C7orf25 (ENSMPUG00000018144)	GLI3 (ENSMPUG00000018143) #22	INHBA (ENSMPUG00000018142) #23	ENSMPUG00000018141	ENSMPUG00000018140	SUGCT (ENSMPUG00000018139) #24	MPLKIP (ENSMPUG00000018138) #25	CDK13 (ENSMPUG00000018137) #26	ENSMPUG00000018136	RALA (ENSMPUG00000018135) #28	ENSMPUG00000018134	YAE1 (ENSMPUG00000018133) #29	POU6F2 (ENSMPUG00000018132) #30	VPS41 (ENSMPUG00000018131)	ENSMPUG00000018130	AMPH (ENSMPUG00000018129)
Ursidae	ANCESTRAL SPECIES	12	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000154390.A.j	ENSGT00390000011179.y.b	ENSGT00390000011179.y.a	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b.eb	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.a.a
Giant Panda	MODERN SPECIES		GRB10 (ENSAMEG00000007889)	ENSAMEG00000029865	COBL (ENSAMEG00000007862)	ENSAMEG00000025603	VSTM2A (ENSAMEG00000015904)	LANCL2 (ENSAMEG00000009212)	ENSAMEG00000030622	ENSAMEG00000017495	ENSAMEG00000017491	BLVRA (ENSAMEG00000017487)	ENSAMEG00000009377	STK17A (ENSAMEG00000009381)	HECW1 (ENSAMEG00000009403)	MRPL32 (ENSAMEG00000009422)	PSMA2 (ENSAMEG00000009463)	GLI3 (ENSAMEG00000008405) #22	INHBA (ENSAMEG00000008401) #23	SUGCT (ENSAMEG00000008389) #24	MPLKIP (ENSAMEG00000008385) #25	CDK13 (ENSAMEG00000008368) #26	ENSAMEG00000008355 #28	YAE1 (ENSAMEG00000008311) #29	ENSAMEG00000029042 #30	VPS41 (ENSAMEG00000008248)	AMPH (ENSAMEG00000008197)	ENSAMEG00000030993	ENSAMEG00000025931	ENSAMEG00000030076	ENSAMEG00000030382	ENSAMEG00000029209	ENSAMEG00000028940
Ursus	ANCESTRAL SPECIES	47	ENSGT00390000006780	ENSGT00940000158323	ENSGT00940000158490	ENSGT00950000182926.b.c	ENSGT00940000156732	ENSGT00940000154390.A.j	ENSGT00390000011179.y.b	ENSGT00390000011179.y.a	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b.eb	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b	ENSGT00940000153143.a.b.b.a.b.d.a.a
Polar bear	MODERN SPECIES	254	YKT6 (ENSUMAG00000009731)	MYL7 (ENSUMAG00000009737)	ENSUMAG00000009769	PGAM2 (ENSUMAG00000009777)	ENSUMAG00000009798	ENSUMAG00000009803	ENSUMAG00000009809	BLVRA (ENSUMAG00000009818)	COA1 (ENSUMAG00000009824)	STK17A (ENSUMAG00000009828)	ENSUMAG00000009834	ENSUMAG00000009845	MRPL32 (ENSUMAG00000009855)	PSMA2 (ENSUMAG00000009859)	C7orf25 (ENSUMAG00000009863)	ENSUMAG00000009879 #22	INHBA (ENSUMAG00000009886) #23	SUGCT (ENSUMAG00000009910) #24	MPLKIP (ENSUMAG00000009927) #25	CDK13 (ENSUMAG00000009940) #26	RALA (ENSUMAG00000010042) #28	YAE1 (ENSUMAG00000010045) #29	POU6F2 (ENSUMAG00000010055) #30	VPS41 (ENSUMAG00000010082)	AMPH (ENSUMAG00000010258)	ENSUMAG00000011063	ENSUMAG00000011067	ENSUMAG00000011076	ENSUMAG00000011080	ENSUMAG00000011085	ENSUMAG00000011092
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1835																ENSUAMG00000021528 #22
American black bear	MODERN SPECIES	3333																GLI3 (ENSUAMG00000024750) #22
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000171874	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.e.a	ENSGT00940000153143.a.b.a	ENSGT00940000153143.a.b.b.b	ENSGT00950000184753	ENSGT00940000153143.a.b.b.a.b
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000155925 #22
Sloth	MODERN SPECIES	768																GLI3 (ENSCHOG00000003774) #22
Armadillo	MODERN SPECIES	4583																GLI3 (ENSDNOG00000049286) #22
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00940000161552	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000171874	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481.g	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.a.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00940000161552	ENSGT00940000156004	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT00940000160556	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000171874	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481.g	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a.f	ENSGT00940000153143.a.b.b.a.a.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766
Elephant	MODERN SPECIES	428	ENSLAFG00000003565	ENSLAFG00000030724	ENSLAFG00000031290	VSTM2A (ENSLAFG00000030452)	SEC61G (ENSLAFG00000012700)	EGFR (ENSLAFG00000014393)	LANCL2 (ENSLAFG00000016836)	VOPP1 (ENSLAFG00000016853)	BLVRA (ENSLAFG00000011250)	STK17A (ENSLAFG00000017171)	ENSLAFG00000008021	ENSLAFG00000016339	MRPL32 (ENSLAFG00000011427)	PSMA2 (ENSLAFG00000011417)	C7orf25 (ENSLAFG00000011416)	GLI3 (ENSLAFG00000008944) #22	INHBA (ENSLAFG00000012737) #23	ENSLAFG00000001629	MPLKIP (ENSLAFG00000021487) #25	CDK13 (ENSLAFG00000017946) #26	RALA (ENSLAFG00000017942) #28	YAE1 (ENSLAFG00000026107) #29	POU6F2 (ENSLAFG00000008294) #30	VPS41 (ENSLAFG00000015987)	AMPH (ENSLAFG00000015646)	ENSLAFG00000032633	ENSLAFG00000025683	ENSLAFG00000027843	STARD3NL (ENSLAFG00000008145)	EPDR1 (ENSLAFG00000007489)	SFRP4 (ENSLAFG00000022015)
Hyrax	MODERN SPECIES	707																GLI3 (ENSPCAG00000015092) #22
Tenrec	MODERN SPECIES	971																GLI3 (ENSETEG00000003955) #22
Marsupialia	ANCESTRAL SPECIES	14	ENSGT01030000234626.C	ENSGT00390000017671.a	ENSGT00940000154222.d.b	ENSGT00390000009677	ENSGT00390000004417.a	ENSGT00390000008749.e	ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT01030000234626.C	ENSGT00390000017671.a	ENSGT00940000154222.d.b	ENSGT00390000009677	ENSGT00390000004417.a	ENSGT00390000008749.e	ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.d.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000161182
Diprotodontia	ANCESTRAL SPECIES	61	ENSGT01030000234626.C	ENSGT00390000017671.a	ENSGT00940000154222.d.b	ENSGT00390000009677	ENSGT00390000004417.a	ENSGT00390000008749.e	ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.d.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000154471.a.b.a.a
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT01030000234626.C	ENSGT00390000017671.a	ENSGT00940000154222.d.b	ENSGT00390000009677	ENSGT00390000004417.a	ENSGT00390000008749.e	ENSGT00390000008427	ENSGT00940000155994.tb	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.d.b	ENSGT00390000014722	ENSGT00940000155925 #22	ENSGT00940000157116 #23	ENSGT00940000157866 #24	ENSGT00390000002582 #25	ENSGT00940000157852 #26	ENSGT00940000155142 #28	ENSGT00390000011176 #29	ENSGT00940000156175 #30	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.a	ENSGT00940000153143.a.b.b.b	ENSGT00940000155476	ENSGT00940000161910	ENSGT00940000160766	ENSGT00940000154471.a.b.a.a
koala	MODERN SPECIES	152	HERPUD2 (ENSPCIG00000009666)	ENSPCIG00000017029	SEPTIN7 (ENSPCIG00000017026)	EEPD1 (ENSPCIG00000017032)	MATCAP2 (ENSPCIG00000023542)	ANLN (ENSPCIG00000025935)	AOAH (ENSPCIG00000025938)	ENSPCIG00000000677	ENSPCIG00000033160	GPR141 (ENSPCIG00000015085)	STK17A (ENSPCIG00000017095)	ENSPCIG00000034872	HECW1 (ENSPCIG00000017097)	MRPL32 (ENSPCIG00000008901)	PSMA2 (ENSPCIG00000008876)	GLI3 (ENSPCIG00000027591) #22	INHBA (ENSPCIG00000027590) #23	SUGCT (ENSPCIG00000002929) #24	MPLKIP (ENSPCIG00000002954) #25	CDK13 (ENSPCIG00000003007) #26	RALA (ENSPCIG00000004323) #28	YAE1 (ENSPCIG00000009972) #29	POU6F2 (ENSPCIG00000035047) #30	VPS41 (ENSPCIG00000010608)	AMPH (ENSPCIG00000010587)	ENSPCIG00000031115	STARD3NL (ENSPCIG00000003468)	ENSPCIG00000023195	SFRP4 (ENSPCIG00000033685)	BICD2 (ENSPCIG00000023207)	ENSPCIG00000023210
Common wonbat	MODERN SPECIES	1053	ENSVURG00010016485	EEPD1 (ENSVURG00010016475)	ENSVURG00010016467	ENSVURG00010016459	ANLN (ENSVURG00010016396)	AOAH (ENSVURG00010016348)	ELMO1 (ENSVURG00010013600)	GPR141 (ENSVURG00010013484)	ENSVURG00010013476	ENSVURG00010013470	STK17A (ENSVURG00010013459)	HECW1 (ENSVURG00010013441)	MRPL32 (ENSVURG00010013428)	ENSVURG00010013418	C7orf25 (ENSVURG00010013415)	GLI3 (ENSVURG00010013401) #22	INHBA (ENSVURG00010013385) #23	SUGCT (ENSVURG00010013353) #24	MPLKIP (ENSVURG00010013339) #25	CDK13 (ENSVURG00010012823) #26	ENSVURG00010012796	RALA (ENSVURG00010012785) #28	ENSVURG00010012782	YAE1 (ENSVURG00010012778) #29	POU6F2 (ENSVURG00010012753) #30	VPS41 (ENSVURG00010012728)	ENSVURG00010012718	ENSVURG00010012712	ENSVURG00010012703	STARD3NL (ENSVURG00010012693)	EPDR1 (ENSVURG00010012685)
Wallaby	MODERN SPECIES	1605																GLI3 (ENSMEUG00000013134) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000006345	ENSSHAG00000027246	ENSSHAG00000030865	ENSSHAG00000006029	ENSSHAG00000003788	ENSSHAG00000025832	MATCAP2 (ENSSHAG00000003634)	AOAH (ENSSHAG00000022160)	ENSSHAG00000022454	ENSSHAG00000001536	ENSSHAG00000031695	HECW1 (ENSSHAG00000026205)	ENSSHAG00000005433	PSMA2 (ENSSHAG00000005564)	C7orf25 (ENSSHAG00000027763)	GLI3 (ENSSHAG00000009727) #22	INHBA (ENSSHAG00000026238) #23	SUGCT (ENSSHAG00000001316) #24	MPLKIP (ENSSHAG00000021509) #25	CDK13 (ENSSHAG00000012296) #26	RALA (ENSSHAG00000027620) #28	YAE1 (ENSSHAG00000021352) #29	POU6F2 (ENSSHAG00000026712) #30	VPS41 (ENSSHAG00000003647)	ENSSHAG00000026440	ENSSHAG00000005261	ENSSHAG00000028189	ENSSHAG00000031474	ENSSHAG00000020715	ENSSHAG00000031848	ENSSHAG00000029508
Opossum	MODERN SPECIES	315						GPR141 (ENSMODG00000022860)	ENSMODG00000022859	ENSMODG00000038952	ENSMODG00000047644	ENSMODG00000049982	HECW1 (ENSMODG00000002297)	MRPL32 (ENSMODG00000002310)	PSMA2 (ENSMODG00000045934)	C7orf25 (ENSMODG00000022858)	ENSMODG00000044626	GLI3 (ENSMODG00000002714) #22	INHBA (ENSMODG00000002721) #23
Platypus	MODERN SPECIES	15	CUL1 (ENSOANG00000000278)	CNTNAP2 (ENSOANG00000008137)	TPK1 (ENSOANG00000020728)	SEC61G (ENSOANG00000038899)	EGFR (ENSOANG00000010685)	LANCL2 (ENSOANG00000010686)	VOPP1 (ENSOANG00000010687)	BLVRA (ENSOANG00000010688)	ENSOANG00000049855	STK17A (ENSOANG00000048615)	HECW1 (ENSOANG00000010691)	MRPL32 (ENSOANG00000045346)	PSMA2 (ENSOANG00000010697)	ENSOANG00000039786	C7orf25 (ENSOANG00000010698)	GLI3 (ENSOANG00000010699) #22	INHBA (ENSOANG00000010700) #23	SUGCT (ENSOANG00000010701) #24	ENSOANG00000020698	ENSOANG00000041944	PLEC (ENSOANG00000044463)	ENSOANG00000013123	GRINA (ENSOANG00000036441)	ENSOANG00000015137	OPLAH (ENSOANG00000015139)	EXOSC4 (ENSOANG00000043411)	GPAA1 (ENSOANG00000014903)	CYC1 (ENSOANG00000038322)	ENSOANG00000046359	MAF1 (ENSOANG00000014615)	ENSOANG00000029883