Gnathostomata ANCESTRAL SPECIES ENSGT00940000155925 #22 Euteleostomi ANCESTRAL SPECIES 131 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00960000187176 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00970000195704 ENSGT00940000153143.a.b.b ENSGT00940000155476 Sarcopterygii ANCESTRAL SPECIES 184 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00960000187176 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00970000195704 ENSGT00940000153143.a.b.b ENSGT00940000155476 Tetrapoda ANCESTRAL SPECIES 40 ENSGT00940000154516.b ENSGT00940000154136 ENSGT00940000164262 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00970000195704 ENSGT00940000153143.a.b.b ENSGT00940000155476 ENSGT00940000161910 Amniota ANCESTRAL SPECIES 7 ENSGT00940000154136 ENSGT00940000164262 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a ENSGT00940000155476 ENSGT00940000161910 Mammalia ANCESTRAL SPECIES 4 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a ENSGT00940000155476 ENSGT00940000161910 Theria ANCESTRAL SPECIES ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a ENSGT00940000155476 ENSGT00940000161910 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b ENSGT00940000155476 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.a Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b Primates ANCESTRAL SPECIES 12 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.a ENSGT00900000143452 ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.a ENSGT00900000143452 ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 Lemuriformes_a ANCESTRAL SPECIES 94 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a Coquerels sifaka MODERN SPECIES 593 GLI3 (ENSPCOG00000002002) #22 INHBA (ENSPCOG00000021472) #23 SUGCT (ENSPCOG00000023610) #24 MPLKIP (ENSPCOG00000007076) #25 CDK13 (ENSPCOG00000020869) #26 ENSPCOG00000028359 #27 RALA (ENSPCOG00000018071) #28 YAE1 (ENSPCOG00000012495) #29 POU6F2 (ENSPCOG00000022128) #30 Greater bamboo lemur MODERN SPECIES 656 ENSPSMG00000016510 MRPL32 (ENSPSMG00000016540) PSMA2 (ENSPSMG00000016578) C7orf25 (ENSPSMG00000016596) ENSPSMG00000016607 ENSPSMG00000016615 #22 Mouse lemur MODERN SPECIES 2 AEBP1 (ENSMICG00000013400) POLM (ENSMICG00000013358) PGAM2 (ENSMICG00000013345) DBNL (ENSMICG00000013311) ENSMICG00000013289 URGCP (ENSMICG00000030783) MRPS24 (ENSMICG00000043303) BLVRA (ENSMICG00000007284) COA1 (ENSMICG00000013834) STK17A (ENSMICG00000047496) ENSMICG00000047051 HECW1 (ENSMICG00000001053) ENSMICG00000045915 PSMA2 (ENSMICG00000017286) C7orf25 (ENSMICG00000017285) GLI3 (ENSMICG00000010785) #22 INHBA (ENSMICG00000033429) #23 YAE1 (ENSMICG00000042079) #29 SUGCT (ENSMICG00000010769) #24 MPLKIP (ENSMICG00000037623) #25 CDK13 (ENSMICG00000044449) #26 RALA (ENSMICG00000038516) #28 ENSMICG00000012521 POU6F2 (ENSMICG00000007361) #30 VPS41 (ENSMICG00000005036) AMPH (ENSMICG00000013941) ENSMICG00000044287 ENSMICG00000029905 ENSMICG00000000945 EPDR1 (ENSMICG00000001946) SFRP4 (ENSMICG00000026727) Bushbaby MODERN SPECIES 234 POLD2 (ENSOGAG00000006720) AEBP1 (ENSOGAG00000007419) POLM (ENSOGAG00000006715) PGAM2 (ENSOGAG00000006713) DBNL (ENSOGAG00000006706) UBE2D4 (ENSOGAG00000004018) URGCP (ENSOGAG00000001595) MRPS24 (ENSOGAG00000001593) BLVRA (ENSOGAG00000001591) COA1 (ENSOGAG00000006944) STK17A (ENSOGAG00000033031) HECW1 (ENSOGAG00000013436) MRPL32 (ENSOGAG00000016806) PSMA2 (ENSOGAG00000016805) C7orf25 (ENSOGAG00000016804) GLI3 (ENSOGAG00000012651) #22 INHBA (ENSOGAG00000003846) #23 ENSOGAG00000025676 MPLKIP (ENSOGAG00000014138) #25 ENSOGAG00000010247 #26 RALA (ENSOGAG00000010244) #28 YAE1 (ENSOGAG00000010241) #29 ENSOGAG00000030149 POU6F2 (ENSOGAG00000033061) #30 VPS41 (ENSOGAG00000000684) AMPH (ENSOGAG00000000682) Haplorrhini ANCESTRAL SPECIES 8 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.a Tarsier MODERN SPECIES 7035 GLI3 (ENSTSYG00000009406) #22 Simiiformes ANCESTRAL SPECIES 12 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.a.a Platyrrhini ANCESTRAL SPECIES 10 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00530000063426.b.b.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00940000155959.m.a ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000153143.a.b.b.a.a.b Cebidae ANCESTRAL SPECIES 9 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00910000144211.n.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00940000155959.m.a ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT01060000248976 Marmoset MODERN SPECIES 20 ENSCJAG00000007934 PGAM2 (ENSCJAG00000007923) ENSCJAG00000007899 URGCP (ENSCJAG00000007849) ENSCJAG00000007842 BLVRA (ENSCJAG00000007829) COA1 (ENSCJAG00000007826) STK17A (ENSCJAG00000007799) ENSCJAG00000078337 HECW1 (ENSCJAG00000007768) ENSCJAG00000082260 ENSCJAG00000062733 MRPL32 (ENSCJAG00000007749) PSMA2 (ENSCJAG00000039517) C7orf25 (ENSCJAG00000007729) GLI3 (ENSCJAG00000007690) #22 INHBA (ENSCJAG00000007682) #23 SUGCT (ENSCJAG00000007656) #24 MPLKIP (ENSCJAG00000007653) #25 CDK13 (ENSCJAG00000007641) #26 ENSCJAG00000077034 RALA (ENSCJAG00000039772) #28 YAE1 (ENSCJAG00000041871) #29 ENSCJAG00000074718 POU6F2 (ENSCJAG00000007618) #30 VPS41 (ENSCJAG00000012686) ENSCJAG00000012684 ENSCJAG00000085472 AMPH (ENSCJAG00000012658) ENSCJAG00000075352 TRGV9 (ENSCJAG00000044374) Cebidae_a ANCESTRAL SPECIES 7 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00910000144211.n.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00940000155959.m.a ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT01060000248976 ENSGT00940000155476 Capuchin MODERN SPECIES 509 ENSCCAG00000002920 MRPL32 (ENSCCAG00000021732) PSMA2 (ENSCCAG00000029169) ENSCCAG00000028803 ENSCCAG00000033306 GLI3 (ENSCCAG00000029874) #22 INHBA (ENSCCAG00000025175) #23 Bolivian squirrel monkey MODERN SPECIES 82 POLM (ENSSBOG00000026333) PGAM2 (ENSSBOG00000031111) DBNL (ENSSBOG00000027972) UBE2D4 (ENSSBOG00000034793) URGCP (ENSSBOG00000020021) ENSSBOG00000028274 BLVRA (ENSSBOG00000030897) COA1 (ENSSBOG00000023098) STK17A (ENSSBOG00000022665) HECW1 (ENSSBOG00000022224) ENSSBOG00000031237 ENSSBOG00000023091 MRPL32 (ENSSBOG00000029277) PSMA2 (ENSSBOG00000019977) ENSSBOG00000033820 GLI3 (ENSSBOG00000020504) #22 INHBA (ENSSBOG00000021061) #23 SUGCT (ENSSBOG00000030111) #24 MPLKIP (ENSSBOG00000003418) #25 ENSSBOG00000031315 #26 RALA (ENSSBOG00000021115) #28 ENSSBOG00000032600 YAE1 (ENSSBOG00000032607) #29 POU6F2 (ENSSBOG00000029519) #30 VPS41 (ENSSBOG00000033706) ENSSBOG00000030272 AMPH (ENSSBOG00000026809) ENSSBOG00000020164 ENSSBOG00000019808 ENSSBOG00000026023 ENSSBOG00000024726 Mas night monkey MODERN SPECIES 1103 BLVRA (ENSANAG00000021982) COA1 (ENSANAG00000038164) STK17A (ENSANAG00000034563) HECW1 (ENSANAG00000033887) ENSANAG00000025842 MRPL32 (ENSANAG00000036260) PSMA2 (ENSANAG00000038426) C7orf25 (ENSANAG00000029268) GLI3 (ENSANAG00000033410) #22 INHBA (ENSANAG00000022627) #23 SUGCT (ENSANAG00000025338) #24 MPLKIP (ENSANAG00000035918) #25 CDK13 (ENSANAG00000019746) #26 RALA (ENSANAG00000030583) #28 ENSANAG00000022924 YAE1 (ENSANAG00000037569) #29 POU6F2 (ENSANAG00000032939) #30 VPS41 (ENSANAG00000027607) ENSANAG00000001067 AMPH (ENSANAG00000023088) SLC25A26 (ENSANAG00000034578) LRIG1 (ENSANAG00000020533) KBTBD8 (ENSANAG00000032012) SUCLG2 (ENSANAG00000033664) Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155142.j #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.a.e.a.c.b Hominoidea ANCESTRAL SPECIES 6 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155959.l ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.a.e.a.c.b Hominidae ANCESTRAL SPECIES 11 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155959.l ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a ENSGT00940000153143.a.a.e.a.d ENSGT00940000153143.a.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155959.l ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a ENSGT00940000153143.a.a.e.a.d ENSGT00940000153143.a.b.a Homo/Pan group ANCESTRAL SPECIES 24 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155959.l ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.a.a.a Pan ANCESTRAL SPECIES 25 ENSGT00390000000481 ENSGT00940000156175 #30 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000156732 ENSGT00950000182926.b.c ENSGT00940000158490 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164.k ENSGT00940000158973.b Chimpanzee MODERN SPECIES 20 VPS41 (ENSPTRG00000019104) POU6F2 (ENSPTRG00000019105) #30 ENSPTRG00000048896 UBE2D4 (ENSPTRG00000045752) URGCP (ENSPTRG00000019128) MRPS24 (ENSPTRG00000019127) BLVRA (ENSPTRG00000046316) COA1 (ENSPTRG00000019125) STK17A (ENSPTRG00000019124) ENSPTRG00000050263 HECW1 (ENSPTRG00000019123) MRPL32 (ENSPTRG00000019121) PSMA2 (ENSPTRG00000019120) C7H7orf25 (ENSPTRG00000023354) ENSPTRG00000046687 GLI3 (ENSPTRG00000019117) #22 INHBA (ENSPTRG00000044337) #23 SUGCT (ENSPTRG00000019114) #24 MPLKIP (ENSPTRG00000019113) #25 CDK13 (ENSPTRG00000019112) #26 ENSPTRG00000034205 ENSPTRG00000050507 RALA (ENSPTRG00000019108) #28 ENSPTRG00000052776 YAE1 (ENSPTRG00000019106) #29 ENSPTRG00000039836 ENSPTRG00000028448 ENSPTRG00000050290 ENSPTRG00000047759 ENSPTRG00000051032 POLM (ENSPTRG00000019136) Bonobo MODERN SPECIES 20 AMPH (ENSPPAG00000042505) VPS41 (ENSPPAG00000040109) POU6F2 (ENSPPAG00000027855) #30 URGCP (ENSPPAG00000034294) MRPS24 (ENSPPAG00000028164) BLVRA (ENSPPAG00000029963) COA1 (ENSPPAG00000030437) ENSPPAG00000035958 ENSPPAG00000004221 HECW1 (ENSPPAG00000030847) MRPL32 (ENSPPAG00000039260) PSMA2 (ENSPPAG00000036019) C7orf25 (ENSPPAG00000040042) ENSPPAG00000036468 ENSPPAG00000022173 GLI3 (ENSPPAG00000043020) #22 INHBA (ENSPPAG00000036866) #23 SUGCT (ENSPPAG00000042639) #24 MPLKIP (ENSPPAG00000037056) #25 CDK13 (ENSPPAG00000041831) #26 RALA (ENSPPAG00000003692) #28 ENSPPAG00000036366 DBNL (ENSPPAG00000031811) PGAM2 (ENSPPAG00000033065) POLM (ENSPPAG00000037663) AEBP1 (ENSPPAG00000004827) POLD2 (ENSPPAG00000029927) MYL7 (ENSPPAG00000038855) GCK (ENSPPAG00000030131) YKT6 (ENSPPAG00000019726) CAMK2B (ENSPPAG00000033180) Human MODERN SPECIES 19 PGAM2 (ENSG00000164708) DBNL (ENSG00000136279) SPDYE1 (ENSG00000136206) UBE2D4 (ENSG00000078967) URGCP (ENSG00000106608) URGCP-MRPS24 (ENSG00000270617) MRPS24 (ENSG00000062582) BLVRA (ENSG00000106605) COA1 (ENSG00000106603) STK17A (ENSG00000164543) HECW1 (ENSG00000002746) MRPL32 (ENSG00000106591) PSMA2 (ENSG00000106588) ENSG00000256646 C7orf25 (ENSG00000136197) GLI3 (ENSG00000106571) #22 INHBA (ENSG00000122641) #23 SUGCT (ENSG00000175600) #24 MPLKIP (ENSG00000168303) #25 CDK13 (ENSG00000065883) #26 RALA (ENSG00000006451) #28 YAE1 (ENSG00000241127) #29 POU6F2 (ENSG00000106536) #30 VPS41 (ENSG00000006715) AMPH (ENSG00000078053) TRGV1 (ENSG00000211701) TRGV2 (ENSG00000233306) TRGV3 (ENSG00000211699) TRGV4 (ENSG00000211698) TRGV5 (ENSG00000211697) TRGV8 (ENSG00000211696) Gorilla MODERN SPECIES 20 ENSGGOG00000022687 ENSGGOG00000043186 ENSGGOG00000037960 UBE2D4 (ENSGGOG00000042519) URGCP (ENSGGOG00000043726) MRPS24 (ENSGGOG00000005692) BLVRA (ENSGGOG00000001735) COA1 (ENSGGOG00000034928) ENSGGOG00000007657 HECW1 (ENSGGOG00000024448) MRPL32 (ENSGGOG00000027492) PSMA2 (ENSGGOG00000006538) C7orf25 (ENSGGOG00000002250) ENSGGOG00000037303 ENSGGOG00000027255 GLI3 (ENSGGOG00000002026) #22 INHBA (ENSGGOG00000042209) #23 SUGCT (ENSGGOG00000034863) #24 MPLKIP (ENSGGOG00000041032) #25 CDK13 (ENSGGOG00000007884) #26 ENSGGOG00000006834 ENSGGOG00000043450 ENSGGOG00000041831 ENSGGOG00000039686 YAE1 (ENSGGOG00000006725) #29 POU6F2 (ENSGGOG00000006718) #30 VPS41 (ENSGGOG00000006665) ENSGGOG00000036763 AMPH (ENSGGOG00000010988) ENSGGOG00000042829 ENSGGOG00000041674 Orangutan MODERN SPECIES 20 POLD2 (ENSPPYG00000017597) AEBP1 (ENSPPYG00000030504) ENSPPYG00000017598 PGAM2 (ENSPPYG00000017599) DBNL (ENSPPYG00000017600) ENSPPYG00000038796 URGCP (ENSPPYG00000017603) MRPS24 (ENSPPYG00000017604) BLVRA (ENSPPYG00000017605) COA1 (ENSPPYG00000017606) STK17A (ENSPPYG00000017607) HECW1 (ENSPPYG00000017608) MRPL32 (ENSPPYG00000017611) PSMA2 (ENSPPYG00000030380) C7orf25 (ENSPPYG00000034147) GLI3 (ENSPPYG00000017613) #22 INHBA (ENSPPYG00000038204) #23 SUGCT (ENSPPYG00000017615) #24 MPLKIP (ENSPPYG00000017617) #25 CDK13 (ENSPPYG00000017618) #26 RALA (ENSPPYG00000017619) #28 YAE1 (ENSPPYG00000035738) #29 POU6F2 (ENSPPYG00000029778) #30 VPS41 (ENSPPYG00000017621) AMPH (ENSPPYG00000017623) ENSPPYG00000033370 ENSPPYG00000030711 ENSPPYG00000037818 ENSPPYG00000037594 ENSPPYG00000032682 ENSPPYG00000034194 Gibbon MODERN SPECIES 7 PGAM2 (ENSNLEG00000003550) DBNL (ENSNLEG00000003395) UBE2D4 (ENSNLEG00000003364) URGCP (ENSNLEG00000003351) ENSNLEG00000026683 MRPS24 (ENSNLEG00000033007) BLVRA (ENSNLEG00000003333) COA1 (ENSNLEG00000003316) STK17A (ENSNLEG00000003304) ENSNLEG00000035608 HECW1 (ENSNLEG00000003209) MRPL32 (ENSNLEG00000027404) PSMA2 (ENSNLEG00000003177) ENSNLEG00000027384 C7orf25 (ENSNLEG00000003174) GLI3 (ENSNLEG00000003160) #22 INHBA (ENSNLEG00000003153) #23 SUGCT (ENSNLEG00000003120) #24 MPLKIP (ENSNLEG00000028028) #25 CDK13 (ENSNLEG00000003097) #26 RALA (ENSNLEG00000003055) #28 YAE1 (ENSNLEG00000032479) #29 ENSNLEG00000029534 POU6F2 (ENSNLEG00000003036) #30 VPS41 (ENSNLEG00000002939) AMPH (ENSNLEG00000002797) ENSNLEG00000027199 ENSNLEG00000028134 ENSNLEG00000030425 ENSNLEG00000029674 ENSNLEG00000030988 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155142.j #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.b ENSGT00940000153143.a.a.e.b Rhinopithecus ANCESTRAL SPECIES 306 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866.c #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT01040000241441 ENSGT00940000155142.i.b #28 ENSGT00940000170592 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000004524.c.a.a.a.b.f ENSGT00390000000481 ENSGT00390000006224.i.b.c ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a.c.a Golden snub-nosed monkey MODERN SPECIES 1141 GLI3 (ENSRROG00000035040) #22 INHBA (ENSRROG00000034770) #23 ENSRROG00000009684 ENSRROG00000033340 #24 MPLKIP (ENSRROG00000031838) #25 CDK13 (ENSRROG00000021528) #26 ENSRROG00000035116 RALA (ENSRROG00000039058) #28 ENSRROG00000041289 YAE1 (ENSRROG00000039482) #29 POU6F2 (ENSRROG00000035258) #30 ENSRROG00000036412 VPS41 (ENSRROG00000037254) ENSRROG00000032501 ENSRROG00000035173 ENSRROG00000011911 Black snub-nosed monkey MODERN SPECIES 211 ENSRBIG00000038202 GLI3 (ENSRBIG00000037773) #22 INHBA (ENSRBIG00000034433) #23 ENSRBIG00000039916 ENSRBIG00000030763 #24 MPLKIP (ENSRBIG00000043237) #25 CDK13 (ENSRBIG00000039699) #26 ENSRBIG00000024978 RALA (ENSRBIG00000039597) #28 ENSRBIG00000039338 YAE1 (ENSRBIG00000040664) #29 POU6F2 (ENSRBIG00000030181) #30 ENSRBIG00000032543 VPS41 (ENSRBIG00000042579) ENSRBIG00000005517 ENSRBIG00000035101 ENSRBIG00000036614 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155142.j #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b.a ENSGT00940000153143.a.a.e.a.c.b Vervet Monkey MODERN SPECIES 13 POLM (ENSCSAG00000015486) PGAM2 (ENSCSAG00000015481) DBNL (ENSCSAG00000015475) UBE2D4 (ENSCSAG00000015467) URGCP (ENSCSAG00000015454) MRPS24 (ENSCSAG00000015447) BLVRA (ENSCSAG00000015441) COA1 (ENSCSAG00000015432) STK17A (ENSCSAG00000015428) HECW1 (ENSCSAG00000015421) ENSCSAG00000015403 PSMA2 (ENSCSAG00000015394) C7orf25 (ENSCSAG00000015390) ENSCSAG00000015385 ENSCSAG00000019599 GLI3 (ENSCSAG00000015361) #22 INHBA (ENSCSAG00000015294) #23 ENSCSAG00000019600 SUGCT (ENSCSAG00000015289) #24 MPLKIP (ENSCSAG00000015281) #25 CDK13 (ENSCSAG00000015259) #26 RALA (ENSCSAG00000015217) #28 YAE1 (ENSCSAG00000015211) #29 ENSCSAG00000019601 POU6F2 (ENSCSAG00000015201) #30 VPS41 (ENSCSAG00000015187) ENSCSAG00000019602 AMPH (ENSCSAG00000015175) ENSCSAG00000015163 ENSCSAG00000015152 ENSCSAG00000015150 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT01040000241441 ENSGT00940000155142.i.b #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00960000187337 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b.a ENSGT00940000153143.a.a.e.a.c.b Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00940000155142.j #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00960000187337 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT01040000241441 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00960000187337 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b Drill MODERN SPECIES 1159 MRPL32 (ENSMLEG00000025401) PSMA2 (ENSMLEG00000030861) ENSMLEG00000030633 GLI3 (ENSMLEG00000028509) #22 INHBA (ENSMLEG00000021286) #23 SUGCT (ENSMLEG00000033800) #24 Sooty mangabey MODERN SPECIES 252 DBNL (ENSCATG00000029728) ENSCATG00000021056 UBE2D4 (ENSCATG00000030978) ENSCATG00000031150 URGCP (ENSCATG00000031265) MRPS24 (ENSCATG00000033132) BLVRA (ENSCATG00000043396) COA1 (ENSCATG00000044042) STK17A (ENSCATG00000033831) ENSCATG00000020670 HECW1 (ENSCATG00000043550) MRPL32 (ENSCATG00000038411) PSMA2 (ENSCATG00000029633) C7orf25 (ENSCATG00000032582) ENSCATG00000030767 GLI3 (ENSCATG00000036694) #22 INHBA (ENSCATG00000036508) #23 Olive baboon MODERN SPECIES 14 ENSPANG00000002445 POLM (ENSPANG00000023968) PGAM2 (ENSPANG00000014548) DBNL (ENSPANG00000019050) URGCP (ENSPANG00000023114) BLVRA (ENSPANG00000007077) COA1 (ENSPANG00000041899) STK17A (ENSPANG00000022843) HECW1 (ENSPANG00000022845) ENSPANG00000043395 MRPL32 (ENSPANG00000023966) PSMA2 (ENSPANG00000007348) C7orf25 (ENSPANG00000040755) ENSPANG00000041647 ENSPANG00000050641 GLI3 (ENSPANG00000014545) #22 INHBA (ENSPANG00000000357) #23 ENSPANG00000041607 ENSPANG00000047702 ENSPANG00000040486 ENSPANG00000050783 SUGCT (ENSPANG00000006854) #24 MPLKIP (ENSPANG00000003774) #25 CDK13 (ENSPANG00000022842) #26 ENSPANG00000049728 RALA (ENSPANG00000022183) #28 YAE1 (ENSPANG00000001303) #29 POU6F2 (ENSPANG00000007998) #30 VPS41 (ENSPANG00000003773) AMPH (ENSPANG00000013001) ENSPANG00000043792 Macaca ANCESTRAL SPECIES 3 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00940000163323.c.a ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142.i.b #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00960000187337 ENSGT00390000006224.i.b ENSGT00940000153339.a.a.b.a ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b.a ENSGT00940000153143.a.a.e.a.c.b ENSGT00940000153143.a.a.e.b.b Pig-tailed macaque MODERN SPECIES 212 ENSMNEG00000038254 UBE2D4 (ENSMNEG00000038205) URGCP (ENSMNEG00000005790) MRPS24 (ENSMNEG00000044096) BLVRA (ENSMNEG00000036114) COA1 (ENSMNEG00000035017) STK17A (ENSMNEG00000040471) ENSMNEG00000037947 ENSMNEG00000033977 HECW1 (ENSMNEG00000028314) MRPL32 (ENSMNEG00000042550) PSMA2 (ENSMNEG00000043089) C7orf25 (ENSMNEG00000038920) ENSMNEG00000034098 ENSMNEG00000039253 GLI3 (ENSMNEG00000019458) #22 INHBA (ENSMNEG00000041912) #23 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00940000163323.c.a ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT01100000263539.b.a.a.a.a.b.b.a.b.a.a ENSGT00940000155142.i.b #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b.a ENSGT00940000153143.a.a.e.a.c.b ENSGT00940000153143.a.a.e.b.b ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b Rhesus MODERN SPECIES 13 AEBP1 (ENSMMUG00000002422) POLM (ENSMMUG00000002421) PGAM2 (ENSMMUG00000064860) URGCP (ENSMMUG00000002408) COA1 (ENSMMUG00000019023) BLVRA (ENSMMUG00000017382) STK17A (ENSMMUG00000019022) HECW1 (ENSMMUG00000019015) ENSMMUG00000057956 ENSMMUG00000049363 MRPL32 (ENSMMUG00000060273) PSMA2 (ENSMMUG00000022451) C3H7orf25 (ENSMMUG00000022449) ENSMMUG00000051741 ENSMMUG00000052530 GLI3 (ENSMMUG00000013614) #22 INHBA (ENSMMUG00000061466) #23 ENSMMUG00000054924 SUGCT (ENSMMUG00000001702) #24 ENSMMUG00000065307 MPLKIP (ENSMMUG00000054607) #25 CDK13 (ENSMMUG00000018064) #26 ENSMMUG00000052918 RALA (ENSMMUG00000050621) #28 ENSMMUG00000050440 YAE1 (ENSMMUG00000013563) #29 POU6F2 (ENSMMUG00000017106) #30 ENSMMUG00000050009 ENSMMUG00000051801 VPS41 (ENSMMUG00000010042) AMPH (ENSMMUG00000023667) Crab-eating macaque MODERN SPECIES 13 PGAM2 (ENSMFAG00000048956) DBNL (ENSMFAG00000032367) ENSMFAG00000000260 URGCP (ENSMFAG00000034049) MRPS24 (ENSMFAG00000003446) COA1 (ENSMFAG00000039026) BLVRA (ENSMFAG00000036162) STK17A (ENSMFAG00000043073) ENSMFAG00000055954 HECW1 (ENSMFAG00000003543) ENSMFAG00000056799 MRPL32 (ENSMFAG00000041218) PSMA2 (ENSMFAG00000032277) C7orf25 (ENSMFAG00000027286) ENSMFAG00000056967 ENSMFAG00000057391 #22 INHBA (ENSMFAG00000054517) #23 SUGCT (ENSMFAG00000043400) #24 MPLKIP (ENSMFAG00000045608) #25 ENSMFAG00000000645 #26 ENSMFAG00000058593 ENSMFAG00000057338 ENSMFAG00000050186 RALA (ENSMFAG00000001704) #28 YAE1 (ENSMFAG00000030308) #29 POU6F2 (ENSMFAG00000035869) #30 VPS41 (ENSMFAG00000041501) ENSMFAG00000060851 ENSMFAG00000048709 AMPH (ENSMFAG00000000228) ENSMFAG00000054044 Euarchontoglires_A ANCESTRAL SPECIES 23 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.a ENSGT00940000168125 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.a Tree shrew MODERN SPECIES 175 GLI3 (ENSTBEG00000006673) #22 Glires ANCESTRAL SPECIES 24 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.a ENSGT00940000168125 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.a Lagomorpha ANCESTRAL SPECIES 164 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000164413 Rabbit MODERN SPECIES 1 ENSOCUG00000034975 ENSOCUG00000031107 THSD7A (ENSOCUG00000008865) TMEM106B (ENSOCUG00000010288) ENSOCUG00000029201 ENSOCUG00000033293 ENSOCUG00000029493 SCIN (ENSOCUG00000006986) ENSOCUG00000008172 BLVRA (ENSOCUG00000006916) STK17A (ENSOCUG00000015953) HECW1 (ENSOCUG00000007994) ENSOCUG00000012098 PSMA2 (ENSOCUG00000012092) C7orf25 (ENSOCUG00000012089) GLI3 (ENSOCUG00000006563) #22 INHBA (ENSOCUG00000000621) #23 ENSOCUG00000033395 SUGCT (ENSOCUG00000003191) #24 MPLKIP (ENSOCUG00000003189) #25 ENSOCUG00000016583 #26 ENSOCUG00000016581 #28 YAE1 (ENSOCUG00000011496) #29 ENSOCUG00000039486 POU6F2 (ENSOCUG00000013896) #30 VPS41 (ENSOCUG00000000676) AMPH (ENSOCUG00000002244) ENSOCUG00000032571 ENSOCUG00000025800 ENSOCUG00000031806 ENSOCUG00000025628 Pika MODERN SPECIES 53 GLI3 (ENSOPRG00000011225) #22 Rodentia ANCESTRAL SPECIES 12 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.a ENSGT00940000168125 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.a Rodentia_B ANCESTRAL SPECIES 40 ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Kangaroo rat MODERN SPECIES 480 ENSDORG00000010332 Hecw1 (ENSDORG00000011163) Mrpl32 (ENSDORG00000011748) Psma2 (ENSDORG00000011746) AW209491 (ENSDORG00000026137) Gli3 (ENSDORG00000001532) #22 ENSDORG00000001744 #23 Sugct (ENSDORG00000001011) #24 ENSDORG00000001010 #25 ENSDORG00000028130 #26 ENSDORG00000027169 Rala (ENSDORG00000024439) #28 Yae1d1 (ENSDORG00000009759) #29 Pou6f2 (ENSDORG00000011157) #30 Vps41 (ENSDORG00000015881) ENSDORG00000023528 Amph (ENSDORG00000000364) Trgc4 (ENSDORG00000029771) ENSDORG00000015981 ENSDORG00000025334 ENSDORG00000014695 Myomorpha ANCESTRAL SPECIES 50 ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Lesser Egyptian jerboa MODERN SPECIES 161 Vstm2a (ENSJJAG00000016705) Sec61g (ENSJJAG00000015922) Egfr (ENSJJAG00000014249) Lancl2 (ENSJJAG00000012831) Vopp1 (ENSJJAG00000012611) Blvra (ENSJJAG00000012133) ENSJJAG00000012096 Hecw1 (ENSJJAG00000011435) Mrpl32 (ENSJJAG00000010906) ENSJJAG00000010341 AW209491 (ENSJJAG00000010303) Gli3 (ENSJJAG00000009019) #22 Inhba (ENSJJAG00000007614) #23 ENSJJAG00000007354 Sugct (ENSJJAG00000010553) #24 ENSJJAG00000009580 #25 ENSJJAG00000007969 #26 Rala (ENSJJAG00000006484) #28 9530077C05Rik (ENSJJAG00000005276) Elmo1 (ENSJJAG00000003658) ENSJJAG00000000615 Gpr141 (ENSJJAG00000012473) Nme8 (ENSJJAG00000000267) Sfrp4 (ENSJJAG00000024190) Epdr1 (ENSJJAG00000024132) Stard3nl (ENSJJAG00000023909) Amph (ENSJJAG00000022889) Muroidea ANCESTRAL SPECIES 78 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Upper Galilee mountains blind mole rat MODERN SPECIES 955 Pif1 (ENSNGAG00000021720) Rbpms2 (ENSNGAG00000023569) ENSNGAG00000015132 Zfp609 (ENSNGAG00000013924) Trip4 (ENSNGAG00000019566) Pclaf (ENSNGAG00000014228) Csnk1g1 (ENSNGAG00000020698) Ppib (ENSNGAG00000010794) Snx22 (ENSNGAG00000009778) Snx1 (ENSNGAG00000008529) Ciao2a (ENSNGAG00000011845) ENSNGAG00000011632 Hecw1 (ENSNGAG00000002566) Mrpl32 (ENSNGAG00000014806) Psma2 (ENSNGAG00000014399) ENSNGAG00000005007 #22 ENSNGAG00000017257 Inhba (ENSNGAG00000016837) #23 Sugct (ENSNGAG00000004026) #24 ENSNGAG00000024052 #25 Cdk13 (ENSNGAG00000021278) #26 Rala (ENSNGAG00000020171) #28 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000155727 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Cricetidae ANCESTRAL SPECIES 7 ENSGT00940000155727 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.b Cricetinae ANCESTRAL SPECIES 26 ENSGT00940000155727 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000164413 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.b Chinese hamster chok1gshd MODERN SPECIES 317 Lgals8 (ENSCGRG00001016202) Edaradd (ENSCGRG00001007181) Ero1b (ENSCGRG00001025067) Gpr137b (ENSCGRG00001015900) Nid1 (ENSCGRG00001013281) Lyst (ENSCGRG00001018628) Gng4 (ENSCGRG00001003037) B3galnt2 (ENSCGRG00001011516) Tbce (ENSCGRG00001023614) Ggps1 (ENSCGRG00001020297) Arid4b (ENSCGRG00001014397) Hecw1 (ENSCGRG00001018493) Mrpl32 (ENSCGRG00001016443) Psma2 (ENSCGRG00001023927) AW209491 (ENSCGRG00001006859) Gli3 (ENSCGRG00001007632) #22 Inhba (ENSCGRG00001019473) #23 Sugct (ENSCGRG00001009192) #24 ENSCGRG00001011481 #25 Cdk13 (ENSCGRG00001020334) #26 ENSCGRG00001012449 #28 Yae1d1 (ENSCGRG00001020898) #29 ENSCGRG00001025025 #30 ENSCGRG00001010504 #30 ENSCGRG00001005827 Vps41 (ENSCGRG00001018659) Amph (ENSCGRG00001019554) ENSCGRG00001009580 Stard3nl (ENSCGRG00001000801) Epdr1 (ENSCGRG00001014717) Sfrp4 (ENSCGRG00001016880) Golden Hamster MODERN SPECIES 646 Lgals8 (ENSMAUG00000009404) Edaradd (ENSMAUG00000009216) Ero1b (ENSMAUG00000003884) Gpr137b (ENSMAUG00000007847) Nid1 (ENSMAUG00000002084) Lyst (ENSMAUG00000001405) Gng4 (ENSMAUG00000011229) B3galnt2 (ENSMAUG00000013962) Tbce (ENSMAUG00000013936) ENSMAUG00000021330 ENSMAUG00000012797 Hecw1 (ENSMAUG00000003157) Mrpl32 (ENSMAUG00000019188) Psma2 (ENSMAUG00000009719) AW209491 (ENSMAUG00000007021) Gli3 (ENSMAUG00000010007) #22 Inhba (ENSMAUG00000021024) #23 Sugct (ENSMAUG00000009567) #24 ENSMAUG00000016486 #25 Cdk13 (ENSMAUG00000017760) #26 Rala (ENSMAUG00000008652) #28 Yae1d1 (ENSMAUG00000015770) #29 ENSMAUG00000013131 #30 Vps41 (ENSMAUG00000018045) ENSMAUG00000015422 Stard3nl (ENSMAUG00000014492) Epdr1 (ENSMAUG00000004400) Sfrp4 (ENSMAUG00000018868) Nme8 (ENSMAUG00000016668) Gpr141 (ENSMAUG00000008686) Elmo1 (ENSMAUG00000021051) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00940000155727 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.b Northern American deer mouse MODERN SPECIES 18 Edaradd (ENSPEMG00000024740) Ero1b (ENSPEMG00000023632) Gpr137b (ENSPEMG00000021433) Nid1 (ENSPEMG00000008596) Lyst (ENSPEMG00000020616) Gng4 (ENSPEMG00000026205) Tbce (ENSPEMG00000020911) Ggps1 (ENSPEMG00000020821) Arid4b (ENSPEMG00000023491) Hecw1 (ENSPEMG00000023229) Mrpl32 (ENSPEMG00000031368) Psma2 (ENSPEMG00000000680) AW209491 (ENSPEMG00000016335) ENSPEMG00000026547 ENSPEMG00000011637 Gli3 (ENSPEMG00000022194) #22 ENSPEMG00000001076 Inhba (ENSPEMG00000030253) #23 ENSPEMG00000028161 Sugct (ENSPEMG00000020290) #24 ENSPEMG00000026169 #25 Cdk13 (ENSPEMG00000020703) #26 ENSPEMG00000027212 Rala (ENSPEMG00000026406) #28 Yae1d1 (ENSPEMG00000026901) #29 ENSPEMG00000020563 #30 Vps41 (ENSPEMG00000022150) Amph (ENSPEMG00000001572) ENSPEMG00000030093 ENSPEMG00000030898 Stard3nl (ENSPEMG00000012415) Prairie vole MODERN SPECIES 85 Ero1b (ENSMOCG00000000371) Gpr137b (ENSMOCG00000002995) Nid1 (ENSMOCG00000014455) Lyst (ENSMOCG00000020883) Gng4 (ENSMOCG00000016288) B3galnt2 (ENSMOCG00000000181) Tbce (ENSMOCG00000009857) Ggps1 (ENSMOCG00000018805) ENSMOCG00000007240 ENSMOCG00000003914 Hecw1 (ENSMOCG00000001967) Mrpl32 (ENSMOCG00000000157) ENSMOCG00000013606 AW209491 (ENSMOCG00000022967) ENSMOCG00000014175 Gli3 (ENSMOCG00000018186) #22 Inhba (ENSMOCG00000001049) #23 Sugct (ENSMOCG00000021393) #24 ENSMOCG00000013905 #25 Cdk13 (ENSMOCG00000018212) #26 Rala (ENSMOCG00000000189) #28 Yae1d1 (ENSMOCG00000012487) #29 ENSMOCG00000015726 #30 ENSMOCG00000005809 ENSMOCG00000004652 Vps41 (ENSMOCG00000018741) Murinae ANCESTRAL SPECIES 27 ENSGT00940000155727 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Mus ANCESTRAL SPECIES 18 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000168709 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b.j ENSGT00940000153143.a.b.a ENSGT00940000168125 ENSGT00950000186470 ENSGT00860000135699 Mus_A ANCESTRAL SPECIES 14 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000168709 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996.db ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b.j ENSGT00940000153143.a.b.a ENSGT00940000168125 ENSGT00950000186470 ENSGT00860000135699 Mus_B ANCESTRAL SPECIES 13 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000168709 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996.db ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b.j ENSGT00980000200102 ENSGT00940000168125 ENSGT00950000186470 ENSGT00860000135699 Mus_C ANCESTRAL SPECIES 10 ENSGT00390000001136 ENSGT00390000007753.a ENSGT00940000153986.b.a ENSGT00940000156318 ENSGT00940000168709 ENSGT00940000156359 ENSGT01100000263497.A ENSGT00940000156562 ENSGT00530000063405.a ENSGT00940000153498.A ENSGT00940000158149 ENSGT00940000158294 ENSGT00390000014996.db ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.b ENSGT00940000153143.a.b.b.b.j ENSGT00980000200102 ENSGT00940000168125 ENSGT00950000186470 ENSGT00860000135699 Steppe mouse MODERN SPECIES 16 Mrpl32 (ENSMSIG00000013590) Psma2 (ENSMSIG00000013613) AW209491 (ENSMSIG00000013663) Gli3 (ENSMSIG00000013680) #22 Inhba (ENSMSIG00000013725) #23 ENSMSIG00000013739 ENSMSIG00000013766 spretus MODERN SPECIES 4 Ero1b (MGP_SPRETEiJ_G0019084) Gpr137b (MGP_SPRETEiJ_G0019085) Nid1 (MGP_SPRETEiJ_G0019086) MGP_SPRETEiJ_G0019087 Lyst (MGP_SPRETEiJ_G0019088) Gng4 (MGP_SPRETEiJ_G0019089) MGP_SPRETEiJ_G0019090 B3galnt2 (MGP_SPRETEiJ_G0019091) Tbce (MGP_SPRETEiJ_G0019092) MGP_SPRETEiJ_G0019093 Arid4b (MGP_SPRETEiJ_G0019094) Hecw1 (MGP_SPRETEiJ_G0019095) Mrpl32 (MGP_SPRETEiJ_G0019096) Psma2 (MGP_SPRETEiJ_G0019097) AW209491 (MGP_SPRETEiJ_G0019098) Gli3 (MGP_SPRETEiJ_G0019099) #22 Inhba (MGP_SPRETEiJ_G0019100) #23 MGP_SPRETEiJ_G0019101 #24 Cdk13 (MGP_SPRETEiJ_G0019102) #26 Rala (MGP_SPRETEiJ_G0019103) #28 Yae1d1 (MGP_SPRETEiJ_G0019104) #29 Pou6f2 (MGP_SPRETEiJ_G0019105) #30 Vps41 (MGP_SPRETEiJ_G0019106) MGP_SPRETEiJ_G0019107 Trgv7 (MGP_SPRETEiJ_G0002330) Trgv4 (MGP_SPRETEiJ_G0002331) Trgv6 (MGP_SPRETEiJ_G0002332) Trgv5 (MGP_SPRETEiJ_G0002333) Trgj3 (MGP_SPRETEiJ_G0002253) Trgj4 (MGP_SPRETEiJ_G0002254) Trgc4 (MGP_SPRETEiJ_G0002244) Mouse MODERN SPECIES 4 Prl2c3 (ENSMUSG00000056457) Prl2c2 (ENSMUSG00000079092) Prl2c5 (ENSMUSG00000055360) Gpr137b (ENSMUSG00000021306) Nid1 (ENSMUSG00000005397) Lyst (ENSMUSG00000019726) Gng4 (ENSMUSG00000021303) B3galnt2 (ENSMUSG00000039242) Tbce (ENSMUSG00000039233) Ggps1 (ENSMUSG00000021302) Arid4b (ENSMUSG00000039219) Hecw1 (ENSMUSG00000021301) Mrpl32 (ENSMUSG00000015672) Psma2 (ENSMUSG00000015671) AW209491 (ENSMUSG00000039182) Gli3 (ENSMUSG00000021318) #22 Inhba (ENSMUSG00000041324) #23 Sugct (ENSMUSG00000055137) #24 Mplkip (ENSMUSG00000012429) #25 Cdk13 (ENSMUSG00000041297) #26 Rala (ENSMUSG00000008859) #28 Yae1d1 (ENSMUSG00000075054) #29 Pou6f2 (ENSMUSG00000009734) #30 Vps41 (ENSMUSG00000041236) Amph (ENSMUSG00000021314) Trgv7 (ENSMUSG00000076744) Trgv4 (ENSMUSG00000076745) Trgv6 (ENSMUSG00000076746) Trgv5 (ENSMUSG00000076747) Trgj1 (ENSMUSG00000104962) Trgc1 (ENSMUSG00000076749) Ryukyu mouse MODERN SPECIES 4 Ero1b (MGP_CAROLIEiJ_G0018226) Gpr137b (MGP_CAROLIEiJ_G0018227) Nid1 (MGP_CAROLIEiJ_G0018228) MGP_CAROLIEiJ_G0018229 Lyst (MGP_CAROLIEiJ_G0018230) Gng4 (MGP_CAROLIEiJ_G0018231) B3galnt2 (MGP_CAROLIEiJ_G0018232) MGP_CAROLIEiJ_G0018233 Tbce (MGP_CAROLIEiJ_G0018234) Ggps1 (MGP_CAROLIEiJ_G0018235) Arid4b (MGP_CAROLIEiJ_G0018236) Hecw1 (MGP_CAROLIEiJ_G0018237) Mrpl32 (MGP_CAROLIEiJ_G0018238) Psma2 (MGP_CAROLIEiJ_G0018239) AW209491 (MGP_CAROLIEiJ_G0018240) Gli3 (MGP_CAROLIEiJ_G0018241) #22 Inhba (MGP_CAROLIEiJ_G0018242) #23 Sugct (MGP_CAROLIEiJ_G0018243) #24 MGP_CAROLIEiJ_G0018244 #25 MGP_CAROLIEiJ_G0018245 #25 Cdk13 (MGP_CAROLIEiJ_G0018246) #26 Rala (MGP_CAROLIEiJ_G0018247) #28 Yae1d1 (MGP_CAROLIEiJ_G0018248) #29 Pou6f2 (MGP_CAROLIEiJ_G0018249) #30 Vps41 (MGP_CAROLIEiJ_G0018250) MGP_CAROLIEiJ_G0018251 Trgv7 (MGP_CAROLIEiJ_G0002202) Trgv4 (MGP_CAROLIEiJ_G0002203) MGP_CAROLIEiJ_G0002204 Trgv5 (MGP_CAROLIEiJ_G0002205) Trgj3 (MGP_CAROLIEiJ_G0002126) Shrew mouse MODERN SPECIES 7 Ero1b (MGP_PahariEiJ_G0019276) Gpr137b (MGP_PahariEiJ_G0019277) Nid1 (MGP_PahariEiJ_G0019278) MGP_PahariEiJ_G0019279 Lyst (MGP_PahariEiJ_G0019280) Gng4 (MGP_PahariEiJ_G0019281) B3galnt2 (MGP_PahariEiJ_G0019282) MGP_PahariEiJ_G0019283 MGP_PahariEiJ_G0019284 Ggps1 (MGP_PahariEiJ_G0019285) Arid4b (MGP_PahariEiJ_G0019286) Hecw1 (MGP_PahariEiJ_G0019287) Mrpl32 (MGP_PahariEiJ_G0019288) Psma2 (MGP_PahariEiJ_G0019289) AW209491 (MGP_PahariEiJ_G0019290) Gli3 (MGP_PahariEiJ_G0019291) #22 Inhba (MGP_PahariEiJ_G0019292) #23 Sugct (MGP_PahariEiJ_G0019293) #24 MGP_PahariEiJ_G0019294 #25 MGP_PahariEiJ_G0019295 #25 Cdk13 (MGP_PahariEiJ_G0019296) #26 Rala (MGP_PahariEiJ_G0019297) #28 Yae1d1 (MGP_PahariEiJ_G0019298) #29 Pou6f2 (MGP_PahariEiJ_G0019299) #30 Vps41 (MGP_PahariEiJ_G0019300) MGP_PahariEiJ_G0019301 Trgv7 (MGP_PahariEiJ_G0002039) Trgv4 (MGP_PahariEiJ_G0002040) MGP_PahariEiJ_G0002041 Trgv5 (MGP_PahariEiJ_G0002042) Trgj3 (MGP_PahariEiJ_G0001962) Rat DUPLICATION Rat MODERN SPECIES 8 Zeb1 (ENSRNOG00000017863) Arhgap12 (ENSRNOG00000017791) Kif5b (ENSRNOG00000017466) B3galnt2 (ENSRNOG00000016855) Tbce (ENSRNOG00000029667) Ggps1 (ENSRNOG00000016767) Arid4b (ENSRNOG00000016391) ENSRNOG00000064563 Rbbp4-ps2 (ENSRNOG00000021292) Hecw1 (ENSRNOG00000016046) Mrpl32 (ENSRNOG00000015989) Psma2 (ENSRNOG00000049920) RGD1308147 (ENSRNOG00000015523) Gabpb1l (ENSRNOG00000053439) Psme1-ps1 (ENSRNOG00000061359) Gli3 (ENSRNOG00000014395) #22 Inhba (ENSRNOG00000014320) #23 Sugct (ENSRNOG00000066247) #24 Mplkip (ENSRNOG00000013806) #25 Cdk13 (ENSRNOG00000013620) #26 Rala (ENSRNOG00000013454) #28 Yae1 (ENSRNOG00000013438) #29 AABR07027925.2 (ENSRNOG00000030925) Pou6f2 (ENSRNOG00000013237) #30 Vps41 (ENSRNOG00000012940) LOC100910792 (ENSRNOG00000059510) ENSRNOG00000070051 AABR07027872.1 (ENSRNOG00000055197) ENSRNOG00000066100 ENSRNOG00000063508 Stard3nl (ENSRNOG00000052429) Rat MODERN SPECIES 4 Marco (ENSRNOG00000049303) C1ql2 (ENSRNOG00000046863) Steap3 (ENSRNOG00000049471) C13h2orf76 (ENSRNOG00000045570) Dbi (ENSRNOG00000046889) Tmem37 (ENSRNOG00000047714) Sctr (ENSRNOG00000049766) Cfap221 (ENSRNOG00000056781) Tmem177 (ENSRNOG00000025484) Ptpn4 (ENSRNOG00000002625) Epb41l5 (ENSRNOG00000002538) Tmem185b (ENSRNOG00000067956) Ralb (ENSRNOG00000002440) Inhbb (ENSRNOG00000060237) ENSRNOG00000070618 Gli2 (ENSRNOG00000007261) #22 Tfcp2l1 (ENSRNOG00000002414) Clasp1 (ENSRNOG00000002376) Nifk (ENSRNOG00000025701) Tsn (ENSRNOG00000002319) ENSRNOG00000070301 ENSRNOG00000069109 LOC120096235 (ENSRNOG00000070646) Cdh19 (ENSRNOG00000029841) Cdh7 (ENSRNOG00000032490) ENSRNOG00000063241 LOC108348870 (ENSRNOG00000029410) RGD1560523 (ENSRNOG00000028513) Serpinb8 (ENSRNOG00000002396) Serpinb10 (ENSRNOG00000002417) Serpinb2 (ENSRNOG00000002460) Rodentia_A ANCESTRAL SPECIES 12 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000155476 Sciuridae ANCESTRAL SPECIES 7 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.a.c ENSGT01060000248976 ENSGT00940000153143.a.b.b.a.b.d.a.d ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Marmotini ANCESTRAL SPECIES 37 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153505.a.a.c.a ENSGT00390000011072 ENSGT00960000189879 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a ENSGT01060000248976.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b ENSGT01060000248976.b ENSGT00940000153143.a.b.b.a.b.d.a.d.a ENSGT00940000155476 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153505.a.a.c.a ENSGT00390000011072 ENSGT00960000189879 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a ENSGT01060000248976.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b ENSGT01060000248976.b ENSGT00940000153143.a.b.b.a.b.d.a.d.a ENSGT00940000155476 Arctic ground squirrel MODERN SPECIES 457 ENSUPAG00010010735 GLI3 (ENSUPAG00010010719) #22 INHBA (ENSUPAG00010010709) #23 Squirrel MODERN SPECIES 78 MYL7 (ENSSTOG00000002725) POLD2 (ENSSTOG00000002713) AEBP1 (ENSSTOG00000002677) POLM (ENSSTOG00000002662) PGAM2 (ENSSTOG00000008573) DBNL (ENSSTOG00000002644) UBE2D4 (ENSSTOG00000002630) URGCP (ENSSTOG00000010637) MRPS24 (ENSSTOG00000032907) BLVRA (ENSSTOG00000021499) STK17A (ENSSTOG00000026139) HECW1 (ENSSTOG00000016043) MRPL32 (ENSSTOG00000013340) PSMA2 (ENSSTOG00000013334) C7orf25 (ENSSTOG00000027844) GLI3 (ENSSTOG00000020844) #22 ENSSTOG00000034121 #23 SUGCT (ENSSTOG00000011998) #24 MPLKIP (ENSSTOG00000026468) #25 CDK13 (ENSSTOG00000022568) #26 RALA (ENSSTOG00000020292) #28 YAE1 (ENSSTOG00000023547) #29 ENSSTOG00000023336 #30 VPS41 (ENSSTOG00000007343) AMPH (ENSSTOG00000012263) ENSSTOG00000022469 STARD3NL (ENSSTOG00000014750) EPDR1 (ENSSTOG00000024033) SFRP4 (ENSSTOG00000012692) NME8 (ENSSTOG00000014565) GPR141 (ENSSTOG00000014563) Alpin marmot MODERN SPECIES 26 URGCP (ENSMMMG00000012282) MRPS24 (ENSMMMG00000012279) ENSMMMG00000012270 BLVRA (ENSMMMG00000012252) ENSMMMG00000012217 STK17A (ENSMMMG00000012208) ENSMMMG00000012200 HECW1 (ENSMMMG00000012160) ENSMMMG00000012152 MRPL32 (ENSMMMG00000012145) PSMA2 (ENSMMMG00000012134) C7orf25 (ENSMMMG00000012127) ENSMMMG00000012115 ENSMMMG00000012111 ENSMMMG00000012105 GLI3 (ENSMMMG00000012080) #22 INHBA (ENSMMMG00000012059) #23 SUGCT (ENSMMMG00000012046) #24 MPLKIP (ENSMMMG00000012038) #25 CDK13 (ENSMMMG00000012001) #26 ENSMMMG00000011996 RALA (ENSMMMG00000011989) #28 YAE1 (ENSMMMG00000011978) #29 ENSMMMG00000011962 #30 VPS41 (ENSMMMG00000011922) ENSMMMG00000011913 AMPH (ENSMMMG00000011881) ENSMMMG00000011878 ENSMMMG00000011872 ENSMMMG00000011859 ENSMMMG00000011847 Eurasian red squirrel MODERN SPECIES 17 PGAM2 (ENSSVLG00005006699) DBNL (ENSSVLG00005006493) UBE2D4 (ENSSVLG00005006358) ENSSVLG00005006336 URGCP (ENSSVLG00005006226) MRPS24 (ENSSVLG00005006180) ENSSVLG00005006086 BLVRA (ENSSVLG00005006049) COA1 (ENSSVLG00005006028) STK17A (ENSSVLG00005005990) HECW1 (ENSSVLG00005005468) ENSSVLG00005005320 MRPL32 (ENSSVLG00005005303) PSMA2 (ENSSVLG00005005237) C7orf25 (ENSSVLG00005005209) GLI3 (ENSSVLG00005005178) #22 INHBA (ENSSVLG00005005151) #23 ENSSVLG00005005081 ENSSVLG00005005063 SUGCT (ENSSVLG00005004898) #24 MPLKIP (ENSSVLG00005004837) #25 ENSSVLG00005004818 #26 RALA (ENSSVLG00005004779) #28 YAE1 (ENSSVLG00005004760) #29 ENSSVLG00005023507 POU6F2 (ENSSVLG00005023305) #30 VPS41 (ENSSVLG00005023041) AMPH (ENSSVLG00005022710) ENSSVLG00005022644 TRGV9 (ENSSVLG00005022616) ENSSVLG00005022603 Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000155476 Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000155476 ENSGT00940000161910 Hystricomorpha_b ANCESTRAL SPECIES 55 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Long-tailed chinchilla MODERN SPECIES 167 BLVRA (ENSCLAG00000008524) STK17A (ENSCLAG00000010347) HECW1 (ENSCLAG00000011773) MRPL32 (ENSCLAG00000016308) PSMA2 (ENSCLAG00000006277) C7orf25 (ENSCLAG00000006458) GLI3 (ENSCLAG00000006524) #22 INHBA (ENSCLAG00000007192) #23 SUGCT (ENSCLAG00000007866) #24 ENSCLAG00000008555 MPLKIP (ENSCLAG00000011526) #25 ENSCLAG00000011577 #26 RALA (ENSCLAG00000006479) #28 YAE1 (ENSCLAG00000006572) #29 ENSCLAG00000006621 #30 ENSCLAG00000006744 #30 VPS41 (ENSCLAG00000007171) AMPH (ENSCLAG00000004190) ENSCLAG00000004875 ENSCLAG00000007481 ENSCLAG00000007605 ENSCLAG00000008044 Degu MODERN SPECIES 72 ENSODEG00000008258 AVL9 (ENSODEG00000007683) ENSODEG00000019886 ENSODEG00000008901 ENSODEG00000007193 ENSODEG00000007433 FKBP9 (ENSODEG00000008022) NT5C3A (ENSODEG00000011094) RP9 (ENSODEG00000009275) BLVRA (ENSODEG00000007949) STK17A (ENSODEG00000007337) HECW1 (ENSODEG00000009462) MRPL32 (ENSODEG00000008658) ENSODEG00000008580 C7orf25 (ENSODEG00000019542) GLI3 (ENSODEG00000008109) #22 INHBA (ENSODEG00000007905) #23 SUGCT (ENSODEG00000008687) #24 ENSODEG00000008104 #25 ENSODEG00000008309 #26 RALA (ENSODEG00000007864) #28 YAE1 (ENSODEG00000007300) #29 POU6F2 (ENSODEG00000009460) #30 ENSODEG00000007666 ENSODEG00000009633 AMPH (ENSODEG00000010210) ENSODEG00000010348 ENSODEG00000009018 STARD3NL (ENSODEG00000007720) EPDR1 (ENSODEG00000008299) SFRP4 (ENSODEG00000008477) Guinea pig MODERN SPECIES 30 KBTBD2 (ENSCPOG00000035648) RP9 (ENSCPOG00000040703) FKBP9 (ENSCPOG00000019418) NT5C3A (ENSCPOG00000013661) ENSCPOG00000021798 BBS9 (ENSCPOG00000000935) ENSCPOG00000023341 ENSCPOG00000023116 BLVRA (ENSCPOG00000008136) ENSCPOG00000037130 STK17A (ENSCPOG00000012689) HECW1 (ENSCPOG00000000176) MRPL32 (ENSCPOG00000034853) PSMA2 (ENSCPOG00000013134) C7orf25 (ENSCPOG00000013131) GLI3 (ENSCPOG00000013233) #22 ENSCPOG00000037187 #23 SUGCT (ENSCPOG00000009948) #24 MPLKIP (ENSCPOG00000037370) #25 ENSCPOG00000009938 #26 RALA (ENSCPOG00000037731) #28 YAE1 (ENSCPOG00000039885) #29 ENSCPOG00000036410 #30 ENSCPOG00000012221 #30 VPS41 (ENSCPOG00000006142) AMPH (ENSCPOG00000006478) ENSCPOG00000024186 STARD3NL (ENSCPOG00000004394) EPDR1 (ENSCPOG00000032481) SFRP4 (ENSCPOG00000010391) NME8 (ENSCPOG00000010378) Naked mole-rat female MODERN SPECIES VWC2 (ENSHGLG00000007717) ZPBP (ENSHGLG00000041298) ENSHGLG00000046389 ENSHGLG00000005101 ENSHGLG00000045050 ENSHGLG00000033925 FIGNL1 (ENSHGLG00000044622) DDC (ENSHGLG00000017870) GRB10 (ENSHGLG00000015464) ENSHGLG00000033610 ENSHGLG00000015702 ENSHGLG00000037511 EGFR (ENSHGLG00000005749) LANCL2 (ENSHGLG00000004769) ENSHGLG00000033405 ENSHGLG00000038563 #22 ENSHGLG00000050582 INHBA (ENSHGLG00000041796) #23 SUGCT (ENSHGLG00000008015) #24 ENSHGLG00000040910 ENSHGLG00000038133 MPLKIP (ENSHGLG00000032456) #25 CDK13 (ENSHGLG00000014999) #26 RALA (ENSHGLG00000038221) #28 YAE1 (ENSHGLG00000010237) #29 ENSHGLG00000044208 POU6F2 (ENSHGLG00000041492) #30 VPS41 (ENSHGLG00000017533) AMPH (ENSHGLG00000008101) ENSHGLG00000049625 ENSHGLG00000048223 Laurasiatheria ANCESTRAL SPECIES 29 ENSGT00530000063608.A ENSGT00940000153253.b.a.h ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00950000185265 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155925 #22 Hedgehog MODERN SPECIES 995 GLI3 (ENSEEUG00000011742) #22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.a.a Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.a.f.f ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a ENSGT00940000153143.a.b.b.a.b.d.b.b Suina ANCESTRAL SPECIES 19 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00940000161885 ENSGT00940000162364 ENSGT00940000162942 ENSGT00940000155153.B ENSGT00940000161747 ENSGT00390000006211 ENSGT00940000162497 Chacoan peccary MODERN SPECIES 898 CAMK2B (ENSCWAG00000005983) YKT6 (ENSCWAG00000006096) GCK (ENSCWAG00000006145) MYL7 (ENSCWAG00000006252) POLD2 (ENSCWAG00000006301) AEBP1 (ENSCWAG00000006341) POLM (ENSCWAG00000006436) BLVRA (ENSCWAG00000006473) COA1 (ENSCWAG00000006493) STK17A (ENSCWAG00000006512) ENSCWAG00000006541 HECW1 (ENSCWAG00000006585) MRPL32 (ENSCWAG00000006907) PSMA2 (ENSCWAG00000006930) C7orf25 (ENSCWAG00000006982) GLI3 (ENSCWAG00000006996) #22 INHBA (ENSCWAG00000007021) #23 SUGCT (ENSCWAG00000007038) #24 MPLKIP (ENSCWAG00000007188) #25 CDK13 (ENSCWAG00000007203) #26 RALA (ENSCWAG00000007246) #28 ENSCWAG00000007273 #29 POU6F2 (ENSCWAG00000007309) #30 VPS41 (ENSCWAG00000007522) ZNF282 (ENSCWAG00000007766) ENSCWAG00000007860 ZNF212 (ENSCWAG00000007892) ZNF783 (ENSCWAG00000007923) ZNF777 (ENSCWAG00000007946) ZNF746 (ENSCWAG00000007990) KRBA1 (ENSCWAG00000008095) Pig MODERN SPECIES 9 NUDCD3 (ENSSSCG00000016747) CAMK2B (ENSSSCG00000039535) YKT6 (ENSSSCG00000016750) GCK (ENSSSCG00000016751) POLD2 (ENSSSCG00000016753) AEBP1 (ENSSSCG00000016754) POLM (ENSSSCG00000016755) BLVRA (ENSSSCG00000016756) ENSSSCG00000027491 STK17A (ENSSSCG00000016758) ENSSSCG00000040496 HECW1 (ENSSSCG00000036443) ENSSSCG00000025060 PSMA2 (ENSSSCG00000039582) C7orf25 (ENSSSCG00000016760) GLI3 (ENSSSCG00000016763) #22 INHBA (ENSSSCG00000035077) #23 SUGCT (ENSSSCG00000035581) #24 MPLKIP (ENSSSCG00000016768) #25 CDK13 (ENSSSCG00000016769) #26 RALA (ENSSSCG00000048439) #28 YAE1 (ENSSSCG00000030497) #29 POU6F2 (ENSSSCG00000037764) #30 VPS41 (ENSSSCG00000016772) ENSSSCG00000055672 ZNF212 (ENSSSCG00000016773) ZNF783 (ENSSSCG00000031870) ZNF777 (ENSSSCG00000016775) ENSSSCG00000056306 KRBA1 (ENSSSCG00000034873) ZNF467 (ENSSSCG00000039041) Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.a.f.f ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a ENSGT00940000153143.a.b.b.a.b.d.b.b Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.b.g ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a Cetacea ANCESTRAL SPECIES 13 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.v.b ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.q ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00390000010089.e.a ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.b.g ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Odontoceti ANCESTRAL SPECIES 12 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.v.b ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.q ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00390000010089.e.a ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.b Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.v.b ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.q ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT00940000154738.a ENSGT00940000155419 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.v.b ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.q ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00940000154937.n.b.a ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.b.g ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.v.b ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.q ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00940000154937.n.b.a ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.b.g ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Beluga whale MODERN SPECIES 17 NUDCD3 (ENSDLEG00000004533) CAMK2B (ENSDLEG00000004510) ENSDLEG00000004496 GCK (ENSDLEG00000004482) MYL7 (ENSDLEG00000004466) POLD2 (ENSDLEG00000004450) AEBP1 (ENSDLEG00000004426) POLM (ENSDLEG00000004372) BLVRA (ENSDLEG00000004351) COA1 (ENSDLEG00000004335) STK17A (ENSDLEG00000004330) HECW1 (ENSDLEG00000004308) MRPL32 (ENSDLEG00000004297) PSMA2 (ENSDLEG00000004285) CUNH7orf25 (ENSDLEG00000004273) GLI3 (ENSDLEG00000004234) #22 INHBA (ENSDLEG00000004199) #23 SUGCT (ENSDLEG00000004144) #24 MPLKIP (ENSDLEG00000004129) #25 CDK13 (ENSDLEG00000004120) #26 RALA (ENSDLEG00000004089) #28 YAE1D1 (ENSDLEG00000004079) #29 ENSDLEG00000004072 POU6F2 (ENSDLEG00000004053) #30 VPS41 (ENSDLEG00000004033) AMPH (ENSDLEG00000004019) TRGV9 (ENSDLEG00000004015) ENSDLEG00000004009 STARD3NL (ENSDLEG00000003993) EPDR1 (ENSDLEG00000003987) SFRP4 (ENSDLEG00000003959) Narwhal MODERN SPECIES 306 NUDCD3 (ENSMMNG00015011532) CAMK2B (ENSMMNG00015011629) ENSMMNG00015011713 GCK (ENSMMNG00015011746) MYL7 (ENSMMNG00015011775) POLD2 (ENSMMNG00015011793) AEBP1 (ENSMMNG00015011811) POLM (ENSMMNG00015011889) BLVRA (ENSMMNG00015011986) COA1 (ENSMMNG00015012011) STK17A (ENSMMNG00015012037) HECW1 (ENSMMNG00015012084) ENSMMNG00015012161 PSMA2 (ENSMMNG00015012176) C7orf25 (ENSMMNG00015012199) GLI3 (ENSMMNG00015012212) #22 INHBA (ENSMMNG00015012234) #23 SUGCT (ENSMMNG00015012249) #24 MPLKIP (ENSMMNG00015012269) #25 CDK13 (ENSMMNG00015012288) #26 RALA (ENSMMNG00015012334) #28 ENSMMNG00015012353 YAE1 (ENSMMNG00015012376) #29 POU6F2 (ENSMMNG00015012404) #30 ENSMMNG00015012432 VPS41 (ENSMMNG00015012514) AMPH (ENSMMNG00015012588) TRGV9 (ENSMMNG00015012603) ENSMMNG00015012608 STARD3NL (ENSMMNG00015012620) EPDR1 (ENSMMNG00015012643) Vaquita MODERN SPECIES 20 NUDCD3 (ENSPSNG00000008964) CAMK2B (ENSPSNG00000007662) ENSPSNG00000007311 GCK (ENSPSNG00000007079) MYL7 (ENSPSNG00000006995) POLD2 (ENSPSNG00000006941) AEBP1 (ENSPSNG00000006807) POLM (ENSPSNG00000006694) BLVRA (ENSPSNG00000006663) ENSPSNG00000006640 STK17A (ENSPSNG00000006610) HECW1 (ENSPSNG00000006347) ENSPSNG00000006232 PSMA2 (ENSPSNG00000006196) C7orf25 (ENSPSNG00000006173) GLI3 (ENSPSNG00000006154) #22 INHBA (ENSPSNG00000006133) #23 SUGCT (ENSPSNG00000006038) #24 MPLKIP (ENSPSNG00000005962) #25 CDK13 (ENSPSNG00000005890) #26 RALA (ENSPSNG00000005824) #28 ENSPSNG00000005805 YAE1 (ENSPSNG00000005783) #29 ENSPSNG00000005765 POU6F2 (ENSPSNG00000005694) #30 VPS41 (ENSPSNG00000005623) AMPH (ENSPSNG00000005476) TRGV9 (ENSPSNG00000005429) ENSPSNG00000005418 STARD3NL (ENSPSNG00000005380) EPDR1 (ENSPSNG00000005343) Dolphin MODERN SPECIES 1135 GLI3 (ENSTTRG00000003628) #22 INHBA (ENSTTRG00000003627) #23 SUGCT (ENSTTRG00000003626) #24 MPLKIP (ENSTTRG00000003625) #25 CDK13 (ENSTTRG00000003620) #26 Sperm whale MODERN SPECIES 16 ENSPCTG00005006814 ENSPCTG00005006010 ENSPCTG00005005920 CAMK2B (ENSPCTG00005005842) YKT6 (ENSPCTG00005005767) GCK (ENSPCTG00005005671) MYL7 (ENSPCTG00005005606) POLD2 (ENSPCTG00005005587) AEBP1 (ENSPCTG00005005498) BLVRA (ENSPCTG00005005350) COA1 (ENSPCTG00005005324) STK17A (ENSPCTG00005005297) HECW1 (ENSPCTG00005004997) MRPL32 (ENSPCTG00005004935) PSMA2 (ENSPCTG00005004869) GLI3 (ENSPCTG00005004827) #22 INHBA (ENSPCTG00005004805) #23 ENSPCTG00005004799 SUGCT (ENSPCTG00005004779) #24 MPLKIP (ENSPCTG00005004756) #25 CDK13 (ENSPCTG00005004628) #26 RALA (ENSPCTG00005004575) #28 ENSPCTG00005004553 YAE1 (ENSPCTG00005004539) #29 ENSPCTG00005004517 #30 ENSPCTG00005004493 VPS41 (ENSPCTG00005004357) AMPH (ENSPCTG00005004186) TRGV9 (ENSPCTG00005004157) ENSPCTG00005004146 STARD3NL (ENSPCTG00005004119) Blue whale MODERN SPECIES 20 YKT6 (ENSBMSG00010008716) GCK (ENSBMSG00010008656) MYL7 (ENSBMSG00010008630) POLD2 (ENSBMSG00010008600) AEBP1 (ENSBMSG00010008578) POLM (ENSBMSG00010008448) ENSBMSG00010008391 BLVRA (ENSBMSG00010008368) COA1 (ENSBMSG00010008357) STK17A (ENSBMSG00010008340) HECW1 (ENSBMSG00010008240) ENSBMSG00010008222 ENSBMSG00010008215 PSMA2 (ENSBMSG00010008200) C7orf25 (ENSBMSG00010008192) GLI3 (ENSBMSG00010008182) #22 INHBA (ENSBMSG00010008174) #23 ENSBMSG00010008170 SUGCT (ENSBMSG00010008128) #24 MPLKIP (ENSBMSG00010008105) #25 CDK13 (ENSBMSG00010008022) #26 RALA (ENSBMSG00010007998) #28 ENSBMSG00010007978 #29 ENSBMSG00010007967 POU6F2 (ENSBMSG00010007920) #30 VPS41 (ENSBMSG00010007891) AMPH (ENSBMSG00010007773) TRGV9 (ENSBMSG00010007735) ENSBMSG00010007727 ENSBMSG00010007675 STARD3NL (ENSBMSG00010007649) Pecora ANCESTRAL SPECIES 11 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000155472.a.a ENSGT00510000047764 ENSGT00940000156619 ENSGT00390000015216 ENSGT00940000157480 Percora_a ANCESTRAL SPECIES 11 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000155472.a.a ENSGT00510000047764 ENSGT00940000156619 ENSGT00390000015216 ENSGT00940000157480 Bovidae ANCESTRAL SPECIES 12 ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000155472.a.a ENSGT00510000047764 ENSGT00940000156619 ENSGT00390000015216 ENSGT00940000157480 Bovinae ANCESTRAL SPECIES 8 ENSGT00940000158973.b ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000159695.h ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000155472.a.a ENSGT00510000047764 ENSGT00940000156619 ENSGT00390000015216 Bos ANCESTRAL SPECIES 8 ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000159695.h ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b ENSGT00940000153143.a.a.f.e.a.a.a Bos_b ANCESTRAL SPECIES 7 ENSGT00940000158973.b ENSGT00390000015164.s.a ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000159695.h ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b ENSGT00940000153143.a.a.f.e.a.a.a ENSGT00940000153143.a.a.f.e.a.a.b.b ENSGT00940000153143.a.a.f.e.a.a.b.a Cow MODERN SPECIES 23 NUDCD3 (ENSBTAG00000006325) CAMK2B (ENSBTAG00000012653) YKT6 (ENSBTAG00000000274) GCK (ENSBTAG00000032288) MYL7 (ENSBTAG00000002066) POLD2 (ENSBTAG00000012241) AEBP1 (ENSBTAG00000012237) POLM (ENSBTAG00000007796) BLVRA (ENSBTAG00000013414) COA1 (ENSBTAG00000012968) STK17A (ENSBTAG00000008143) HECW1 (ENSBTAG00000021216) MRPL32 (ENSBTAG00000000991) PSMA2 (ENSBTAG00000000990) C4H7orf25 (ENSBTAG00000009472) GLI3 (ENSBTAG00000010671) #22 INHBA (ENSBTAG00000048508) #23 ENSBTAG00000053253 SUGCT (ENSBTAG00000032121) #24 MPLKIP (ENSBTAG00000018715) #25 CDK13 (ENSBTAG00000001528) #26 ENSBTAG00000054825 RALA (ENSBTAG00000006661) #28 YAE1 (ENSBTAG00000001892) #29 POU6F2 (ENSBTAG00000013648) #30 VPS41 (ENSBTAG00000007305) AMPH (ENSBTAG00000031967) ENSBTAG00000000144 ENSBTAG00000053474 ENSBTAG00000055254 ENSBTAG00000002859 Hybrid Bos Indicus MODERN SPECIES 23 CAMK2B (ENSBIXG00005019061) ENSBIXG00005003122 ENSBIXG00005003126 GCK (ENSBIXG00005019239) MYL7 (ENSBIXG00005019279) AEBP1 (ENSBIXG00005019312) POLD2 (ENSBIXG00005019352) POLM (ENSBIXG00005005521) BLVRA (ENSBIXG00005003157) ENSBIXG00005006146 HECW1 (ENSBIXG00005019608) MRPL32 (ENSBIXG00005019681) PSMA2 (ENSBIXG00005007827) C7orf25 (ENSBIXG00005019735) ENSBIXG00005006253 GLI3 (ENSBIXG00005019847) #22 INHBA (ENSBIXG00005019918) #23 ENSBIXG00005019940 SUGCT (ENSBIXG00005003265) #24 MPLKIP (ENSBIXG00005020016) #25 CDK13 (ENSBIXG00005020092) #26 ENSBIXG00005020109 ENSBIXG00005020124 RALA (ENSBIXG00005020138) #28 YAE1 (ENSBIXG00005005866) #29 POU6F2 (ENSBIXG00005020231) #30 VPS41 (ENSBIXG00005020347) ENSBIXG00005020415 AMPH (ENSBIXG00005020476) ENSBIXG00005006259 ENSBIXG00005020518 Bos_a ANCESTRAL SPECIES 12 ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000159695.h ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b ENSGT00940000153143.a.a.f.e.a.a.a Wild yak MODERN SPECIES 1134 ENSBMUG00000020007 #22 ENSBMUG00000020073 ENSBMUG00000020333 Domestic yak MODERN SPECIES 23 YKT6 (ENSBGRG00000012169) GCK (ENSBGRG00000011827) ENSBGRG00000011683 POLD2 (ENSBGRG00000011507) AEBP1 (ENSBGRG00000011094) POLM (ENSBGRG00000010989) BLVRA (ENSBGRG00000010875) ENSBGRG00000010681 STK17A (ENSBGRG00000010569) ENSBGRG00000010541 HECW1 (ENSBGRG00000010187) MRPL32 (ENSBGRG00000010055) ENSBGRG00000009970 C7orf25 (ENSBGRG00000009953) ENSBGRG00000009871 GLI3 (ENSBGRG00000009720) #22 INHBA (ENSBGRG00000009678) #23 ENSBGRG00000009661 SUGCT (ENSBGRG00000009489) #24 MPLKIP (ENSBGRG00000009446) #25 CDK13 (ENSBGRG00000009206) #26 ENSBGRG00000009155 RALA (ENSBGRG00000009084) #28 YAE1 (ENSBGRG00000009045) #29 POU6F2 (ENSBGRG00000008844) #30 VPS41 (ENSBGRG00000008270) AMPH (ENSBGRG00000007825) ENSBGRG00000007791 ENSBGRG00000007724 ENSBGRG00000007684 ENSBGRG00000007662 American bison MODERN SPECIES 3354 CAMK2B (ENSBBBG00000017918) YKT6 (ENSBBBG00000016921) GCK (ENSBBBG00000004174) MYL7 (ENSBBBG00000016836) POLD2 (ENSBBBG00000004159) AEBP1 (ENSBBBG00000016760) POLM (ENSBBBG00000016689) BLVRA (ENSBBBG00000016667) COA1 (ENSBBBG00000016648) STK17A (ENSBBBG00000016637) HECW1 (ENSBBBG00000016613) ENSBBBG00000016533 MRPL32 (ENSBBBG00000007141) PSMA2 (ENSBBBG00000007372) C7orf25 (ENSBBBG00000016430) GLI3 (ENSBBBG00000016416) #22 ENSBBBG00000016287 INHBA (ENSBBBG00000016277) #23 SUGCT (ENSBBBG00000016251) #24 MPLKIP (ENSBBBG00000016185) #25 CDK13 (ENSBBBG00000004014) #26 ENSBBBG00000016104 ENSBBBG00000016100 ENSBBBG00000016096 ENSBBBG00000016085 RALA (ENSBBBG00000016078) #28 YAE1 (ENSBBBG00000016071) #29 POU6F2 (ENSBBBG00000007418) #30 VPS41 (ENSBBBG00000016003) ENSBBBG00000015915 AMPH (ENSBBBG00000015904) Caprinae ANCESTRAL SPECIES 10 ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b ENSGT00940000153143.a.a.f.e.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b ENSGT00940000153143.a.a.f.e.b.b ENSGT00950000185265 Goat MODERN SPECIES 23 ENSCHIG00000026885 GCK (ENSCHIG00000015555) MYL7 (ENSCHIG00000022014) POLD2 (ENSCHIG00000009706) AEBP1 (ENSCHIG00000019312) POLM (ENSCHIG00000022903) ENSCHIG00000019345 COA1 (ENSCHIG00000025366) STK17A (ENSCHIG00000012894) ENSCHIG00000022757 HECW1 (ENSCHIG00000018639) MRPL32 (ENSCHIG00000026167) ENSCHIG00000012524 C7orf25 (ENSCHIG00000009068) ENSCHIG00000012804 GLI3 (ENSCHIG00000015297) #22 INHBA (ENSCHIG00000025901) #23 SUGCT (ENSCHIG00000017599) #24 MPLKIP (ENSCHIG00000021871) #25 ENSCHIG00000022322 CDK13 (ENSCHIG00000022113) #26 RALA (ENSCHIG00000013549) #28 YAE1 (ENSCHIG00000016002) #29 ENSCHIG00000016882 #30 ENSCHIG00000020600 #30 VPS41 (ENSCHIG00000005959) ENSCHIG00000011903 AMPH (ENSCHIG00000020495) ENSCHIG00000013794 ENSCHIG00000018076 ENSCHIG00000007301 Rambouillet Sheep MODERN SPECIES 20 GCK (ENSOARG00020008181) MYL7 (ENSOARG00020008661) POLD2 (ENSOARG00020008736) AEBP1 (ENSOARG00020008818) BLVRA (ENSOARG00020008976) ENSOARG00020009019 COA1 (ENSOARG00020009061) STK17A (ENSOARG00020009115) ENSOARG00020009157 HECW1 (ENSOARG00020009226) ENSOARG00020010002 MRPL32 (ENSOARG00020010057) ENSOARG00020010111 C7orf25 (ENSOARG00020010245) ENSOARG00020010281 GLI3 (ENSOARG00020010338) #22 ENSOARG00020000108 INHBA (ENSOARG00020000159) #23 SUGCT (ENSOARG00020000282) #24 MPLKIP (ENSOARG00020000391) #25 CDK13 (ENSOARG00020000425) #26 RALA (ENSOARG00020000572) #28 ENSOARG00020000581 #29 POU6F2 (ENSOARG00020000606) #30 VPS41 (ENSOARG00020000815) AMPH (ENSOARG00020001336) ENSOARG00020001937 ENSOARG00020001954 ENSOARG00020001968 ENSOARG00020001983 ENSOARG00020002001 Siberian musk deer MODERN SPECIES 87 GCK (ENSMMSG00000010554) MYL7 (ENSMMSG00000010461) POLD2 (ENSMMSG00000010417) AEBP1 (ENSMMSG00000010337) POLM (ENSMMSG00000010267) BLVRA (ENSMMSG00000010224) COA1 (ENSMMSG00000010212) STK17A (ENSMMSG00000010195) ENSMMSG00000010172 HECW1 (ENSMMSG00000009873) ENSMMSG00000009803 ENSMMSG00000009775 MRPL32 (ENSMMSG00000009758) PSMA2 (ENSMMSG00000009746) C7orf25 (ENSMMSG00000009736) GLI3 (ENSMMSG00000009711) #22 ENSMMSG00000009697 INHBA (ENSMMSG00000009680) #23 SUGCT (ENSMMSG00000009548) #24 MPLKIP (ENSMMSG00000009516) #25 CDK13 (ENSMMSG00000009356) #26 RALA (ENSMMSG00000009317) #28 YAE1 (ENSMMSG00000009286) #29 ENSMMSG00000009247 POU6F2 (ENSMMSG00000009061) #30 VPS41 (ENSMMSG00000008890) Yarkand deer MODERN SPECIES 9 YKT6 (ENSCHYG00000019044) GCK (ENSCHYG00000019315) MYL7 (ENSCHYG00000019693) POLD2 (ENSCHYG00000019805) AEBP1 (ENSCHYG00000019970) POLM (ENSCHYG00000020114) ENSCHYG00000020306 ENSCHYG00000020384 STK17A (ENSCHYG00000020545) HECW1 (ENSCHYG00000020708) MRPL32 (ENSCHYG00000021557) PSMA2 (ENSCHYG00000021589) C7orf25 (ENSCHYG00000021701) ENSCHYG00000021719 ENSCHYG00000021751 GLI3 (ENSCHYG00000021798) #22 INHBA (ENSCHYG00000022041) #23 ENSCHYG00000022091 SUGCT (ENSCHYG00000022125) #24 ENSCHYG00000022424 ENSCHYG00000022441 MPLKIP (ENSCHYG00000022483) #25 CDK13 (ENSCHYG00000022509) #26 RALA (ENSCHYG00000022661) #28 YAE1 (ENSCHYG00000022705) #29 POU6F2 (ENSCHYG00000022756) #30 VPS41 (ENSCHYG00000023031) AMPH (ENSCHYG00000023423) ENSCHYG00000023515 TRGV9 (ENSCHYG00000023546) ENSCHYG00000023578 Camelidae ANCESTRAL SPECIES 2 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.a.f.f ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ENSGT00940000155476 ENSGT00940000161910 Alpaca MODERN SPECIES 148 ENSVPAG00000000048 #22 INHBA (ENSVPAG00000000046) #23 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 33 NPC1L1 (ENSCDRG00005003185) NUDCD3 (ENSCDRG00005003287) CAMK2B (ENSCDRG00005003656) YKT6 (ENSCDRG00005009780) GCK (ENSCDRG00005009900) MYL7 (ENSCDRG00005010225) POLD2 (ENSCDRG00005010307) AEBP1 (ENSCDRG00005010388) POLM (ENSCDRG00005010471) BLVRA (ENSCDRG00005010641) COA1 (ENSCDRG00005010728) ENSCDRG00005010848 HECW1 (ENSCDRG00005010909) MRPL32 (ENSCDRG00005011105) C7orf25 (ENSCDRG00005011146) ENSCDRG00005011309 #22 GLI3 (ENSCDRG00005011370) #22 INHBA (ENSCDRG00005011609) #23 SUGCT (ENSCDRG00005011669) #24 MPLKIP (ENSCDRG00005012010) #25 CDK13 (ENSCDRG00005012070) #26 RALA (ENSCDRG00005012560) #28 YAE1 (ENSCDRG00005012620) #29 ENSCDRG00005012656 #30 VPS41 (ENSCDRG00005012696) AMPH (ENSCDRG00005012906) TRGV9 (ENSCDRG00005013028) ENSCDRG00005013064 ENSCDRG00005013075 ENSCDRG00005013102 STARD3NL (ENSCDRG00005013129) Arabian camel MODERN SPECIES 33 NUDCD3 (ENSCDRG00005003287) CAMK2B (ENSCDRG00005003656) YKT6 (ENSCDRG00005009780) GCK (ENSCDRG00005009900) MYL7 (ENSCDRG00005010225) POLD2 (ENSCDRG00005010307) AEBP1 (ENSCDRG00005010388) POLM (ENSCDRG00005010471) BLVRA (ENSCDRG00005010641) COA1 (ENSCDRG00005010728) ENSCDRG00005010848 HECW1 (ENSCDRG00005010909) MRPL32 (ENSCDRG00005011105) C7orf25 (ENSCDRG00005011146) ENSCDRG00005011309 #22 GLI3 (ENSCDRG00005011370) #22 INHBA (ENSCDRG00005011609) #23 SUGCT (ENSCDRG00005011669) #24 MPLKIP (ENSCDRG00005012010) #25 CDK13 (ENSCDRG00005012070) #26 RALA (ENSCDRG00005012560) #28 YAE1 (ENSCDRG00005012620) #29 ENSCDRG00005012656 #30 VPS41 (ENSCDRG00005012696) AMPH (ENSCDRG00005012906) TRGV9 (ENSCDRG00005013028) ENSCDRG00005013064 ENSCDRG00005013075 ENSCDRG00005013102 STARD3NL (ENSCDRG00005013129) EPDR1 (ENSCDRG00005013212) Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.b Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Equus ANCESTRAL SPECIES 57 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.u ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.f.c.a.a.a.a.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000153143.a.a.f.c.a.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.i.b ENSGT00940000153143.a.a.f.c.a.a.a.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b.b Donkey MODERN SPECIES POLD2 (ENSEASG00005017741) AEBP1 (ENSEASG00005017728) POLM (ENSEASG00005017723) PGAM2 (ENSEASG00005017720) DBNL (ENSEASG00005017717) UBE2D4 (ENSEASG00005017715) URGCP (ENSEASG00005017713) MRPS24 (ENSEASG00005030446) BLVRA (ENSEASG00005017707) COA1 (ENSEASG00005029281) STK17A (ENSEASG00005017699) HECW1 (ENSEASG00005017685) ENSEASG00005027314 PSMA2 (ENSEASG00005017678) C7orf25 (ENSEASG00005017675) GLI3 (ENSEASG00005017667) #22 INHBA (ENSEASG00005029952) #23 SUGCT (ENSEASG00005017649) #24 MPLKIP (ENSEASG00005017642) #25 CDK13 (ENSEASG00005017623) #26 ENSEASG00005036227 RALA (ENSEASG00005017614) #28 YAE1 (ENSEASG00005017612) #29 POU6F2 (ENSEASG00005017610) #30 ENSEASG00005027728 ENSEASG00005017606 AMPH (ENSEASG00005017588) ENSEASG00005032514 ENSEASG00005027212 ENSEASG00005024703 ENSEASG00005024515 Horse MODERN SPECIES 25 AEBP1 (ENSECAG00000019884) POLM (ENSECAG00000013117) PGAM2 (ENSECAG00000046525) DBNL (ENSECAG00000012048) UBE2D4 (ENSECAG00000019978) URGCP (ENSECAG00000017344) MRPS24 (ENSECAG00000014621) ENSECAG00000009786 BLVRA (ENSECAG00000011650) COA1 (ENSECAG00000011136) STK17A (ENSECAG00000006915) HECW1 (ENSECAG00000010537) PSMA2 (ENSECAG00000020597) ENSECAG00000009052 C4H7orf25 (ENSECAG00000002284) GLI3 (ENSECAG00000009281) #22 INHBA (ENSECAG00000022448) #23 SUGCT (ENSECAG00000020946) #24 MPLKIP (ENSECAG00000033876) #25 CDK13 (ENSECAG00000017341) #26 ENSECAG00000043932 ENSECAG00000051072 RALA (ENSECAG00000017044) #28 YAE1 (ENSECAG00000014499) #29 POU6F2 (ENSECAG00000013209) #30 VPS41 (ENSECAG00000006943) AMPH (ENSECAG00000004135) ENSECAG00000050978 ENSECAG00000038560 ENSECAG00000059202 ENSECAG00000036132 Chiroptera ANCESTRAL SPECIES 24 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000155476 ENSGT00940000161910 Microchiroptera ANCESTRAL SPECIES 24 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.cb.a ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000155476 ENSGT00940000161910 Greater horseshoe bat MODERN SPECIES 12 BLVRA (ENSRFEG00010020740) COA1 (ENSRFEG00010020716) HECW1 (ENSRFEG00010020668) ENSRFEG00010020602 PSMA2 (ENSRFEG00010020543) C7orf25 (ENSRFEG00010020516) GLI3 (ENSRFEG00010020493) #22 INHBA (ENSRFEG00010020467) #23 SUGCT (ENSRFEG00010020366) #24 MPLKIP (ENSRFEG00010020336) #25 CDK13 (ENSRFEG00010020169) #26 RALA (ENSRFEG00010020134) #28 YAE1 (ENSRFEG00010020105) #29 POU6F2 (ENSRFEG00010019962) #30 ENSRFEG00010019906 VPS41 (ENSRFEG00010019744) AMPH (ENSRFEG00010019645) ENSRFEG00010019577 ENSRFEG00010019565 ENSRFEG00010019552 ENSRFEG00010019509 ENSRFEG00010019499 Microbat MODERN SPECIES 955 FKBP9 (ENSMLUG00000005524) ENSMLUG00000023079 KBTBD2 (ENSMLUG00000005395) AVL9 (ENSMLUG00000001155) ZNF862 (ENSMLUG00000011313) ATP6V0E2 (ENSMLUG00000029276) LRRC61 (ENSMLUG00000005795) RARRES2 (ENSMLUG00000005796) ENSMLUG00000024808 GIMAP8 (ENSMLUG00000012405) HECW1 (ENSMLUG00000003954) MRPL32 (ENSMLUG00000010108) ENSMLUG00000010086 C7orf25 (ENSMLUG00000010080) ENSMLUG00000027695 GLI3 (ENSMLUG00000015711) #22 INHBA (ENSMLUG00000015706) #23 SUGCT (ENSMLUG00000003940) #24 ENSMLUG00000027675 ENSMLUG00000030645 #25 CDK13 (ENSMLUG00000017326) #26 RALA (ENSMLUG00000009687) #28 ENSMLUG00000024824 YAE1 (ENSMLUG00000002704) #29 ENSMLUG00000002698 #30 VPS41 (ENSMLUG00000008811) AMPH (ENSMLUG00000009337) ENSMLUG00000027596 ENSMLUG00000022442 ENSMLUG00000025893 ENSMLUG00000022304 Megabat MODERN SPECIES 3879 GLI3 (ENSPVAG00000015920) #22 Carnivora ANCESTRAL SPECIES 15 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.a ENSGT00940000153143.a.b.b.b Felidae ANCESTRAL SPECIES 13 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.tb ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00390000006350.m.b.l ENSGT01010000227741 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a ENSGT00940000155476 ENSGT00940000164413 Panthera ANCESTRAL SPECIES 1 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.tb ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00390000006350.m.b.l ENSGT01010000227741 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a Panthera_a ANCESTRAL SPECIES ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.tb ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00390000006350.m.b.l ENSGT01010000227741 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a leopard MODERN SPECIES 20 ENSPPRG00000004045 ENSPPRG00000002561 VSTM2A (ENSPPRG00000002498) ENSPPRG00000001760 EGFR (ENSPPRG00000000798) LANCL2 (ENSPPRG00000024925) VOPP1 (ENSPPRG00000024967) BLVRA (ENSPPRG00000015157) ENSPPRG00000014621 STK17A (ENSPPRG00000013907) HECW1 (ENSPPRG00000013400) MRPL32 (ENSPPRG00000011233) PSMA2 (ENSPPRG00000011046) C7orf25 (ENSPPRG00000010249) ENSPPRG00000010031 GLI3 (ENSPPRG00000009937) #22 INHBA (ENSPPRG00000009179) #23 SUGCT (ENSPPRG00000007612) #24 ENSPPRG00000005409 ENSPPRG00000004981 #25 CDK13 (ENSPPRG00000004607) #26 ENSPPRG00000002725 RALA (ENSPPRG00000001413) #28 YAE1 (ENSPPRG00000000795) #29 POU6F2 (ENSPPRG00000000448) #30 VPS41 (ENSPPRG00000023241) AMPH (ENSPPRG00000018727) ENSPPRG00000013366 ENSPPRG00000011849 ENSPPRG00000011214 ENSPPRG00000010408 lion MODERN SPECIES 2 DDC (ENSPLOG00000009679) GRB10 (ENSPLOG00000010028) ENSPLOG00000010143 VSTM2A (ENSPLOG00000010335) ENSPLOG00000010418 EGFR (ENSPLOG00000010535) LANCL2 (ENSPLOG00000011084) VOPP1 (ENSPLOG00000011205) BLVRA (ENSPLOG00000011346) ENSPLOG00000011414 STK17A (ENSPLOG00000011441) HECW1 (ENSPLOG00000011517) MRPL32 (ENSPLOG00000011953) PSMA2 (ENSPLOG00000012010) C7orf25 (ENSPLOG00000012077) GLI3 (ENSPLOG00000012098) #22 INHBA (ENSPLOG00000012325) #23 SUGCT (ENSPLOG00000012382) #24 MPLKIP (ENSPLOG00000012761) #25 CDK13 (ENSPLOG00000012792) #26 ENSPLOG00000012926 ENSPLOG00000012991 RALA (ENSPLOG00000013111) #28 YAE1 (ENSPLOG00000013140) #29 POU6F2 (ENSPLOG00000013191) #30 VPS41 (ENSPLOG00000013425) AMPH (ENSPLOG00000013547) ENSPLOG00000013911 ENSPLOG00000013936 ENSPLOG00000014034 ENSPLOG00000014062 Tiger MODERN SPECIES 484 IKZF1 (ENSPTIG00000011482) DDC (ENSPTIG00000012235) GRB10 (ENSPTIG00000013185) ENSPTIG00000014777 VSTM2A (ENSPTIG00000015114) ENSPTIG00000015657 EGFR (ENSPTIG00000015949) LANCL2 (ENSPTIG00000017744) VOPP1 (ENSPTIG00000017875) BLVRA (ENSPTIG00000018409) STK17A (ENSPTIG00000018723) HECW1 (ENSPTIG00000018862) MRPL32 (ENSPTIG00000019413) PSMA2 (ENSPTIG00000019642) C7orf25 (ENSPTIG00000019732) ENSPTIG00000019835 #22 INHBA (ENSPTIG00000019931) #23 SUGCT (ENSPTIG00000019973) #24 MPLKIP (ENSPTIG00000020797) #25 ENSPTIG00000001053 #26 RALA (ENSPTIG00000004587) #28 YAE1 (ENSPTIG00000004957) #29 POU6F2 (ENSPTIG00000005482) #30 VPS41 (ENSPTIG00000007310) AMPH (ENSPTIG00000008766) ENSPTIG00000010636 ENSPTIG00000011074 ENSPTIG00000011171 ENSPTIG00000011341 Cat MODERN SPECIES 1 VSTM2A (ENSFCAG00000003204) ENSFCAG00000032978 EGFR (ENSFCAG00000015468) LANCL2 (ENSFCAG00000027536) VOPP1 (ENSFCAG00000037032) BLVRA (ENSFCAG00000026122) ENSFCAG00000047953 ENSFCAG00000048002 ENSFCAG00000049450 ENSFCAG00000039405 STK17A (ENSFCAG00000006138) HECW1 (ENSFCAG00000010375) MRPL32 (ENSFCAG00000041230) PSMA2 (ENSFCAG00000023349) CA2H7orf25 (ENSFCAG00000013690) GLI3 (ENSFCAG00000011989) #22 INHBA (ENSFCAG00000010866) #23 SUGCT (ENSFCAG00000010258) #24 MPLKIP (ENSFCAG00000036429) #25 CDK13 (ENSFCAG00000010257) #26 ENSFCAG00000033905 ENSFCAG00000048602 RALA (ENSFCAG00000025425) #28 YAE1 (ENSFCAG00000027937) #29 POU6F2 (ENSFCAG00000035781) #30 VPS41 (ENSFCAG00000019210) AMPH (ENSFCAG00000003529) TRG (ENSFCAG00000050998) ENSFCAG00000023786 ENSFCAG00000035027 ENSFCAG00000039973 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.a.a ENSGT00940000153143.a.b.b.b Canidae ANCESTRAL SPECIES 54 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00390000001376.db.g ENSGT00390000008294.e.b.a.a ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.e ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.b ENSGT00940000153143.a.b.b.b Canis_lupus ANCESTRAL SPECIES 45 ENSGT00530000063608.A ENSGT00940000168023 ENSGT01090000260040.a.a.b.ec ENSGT00940000160556 ENSGT00390000001319.qb ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00390000001376.db.g.g ENSGT00390000008294.e.b.a.a ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.a.a ENSGT00940000153143.a.b.b.a.b.d.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b.h ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a Dingo MODERN SPECIES 103 ENSCAFG00020024181 ENSCAFG00020024178 ENSCAFG00020024176 VSTM2A (ENSCAFG00020024172) ENSCAFG00020024170 EGFR (ENSCAFG00020023672) LANCL2 (ENSCAFG00020023610) VOPP1 (ENSCAFG00020023604) BLVRA (ENSCAFG00020023597) COA1 (ENSCAFG00020023593) STK17A (ENSCAFG00020023589) HECW1 (ENSCAFG00020023579) MRPL32 (ENSCAFG00020023577) PSMA2 (ENSCAFG00020023566) C7orf25 (ENSCAFG00020023562) GLI3 (ENSCAFG00020023540) #22 INHBA (ENSCAFG00020023530) #23 ENSCAFG00020023526 SUGCT (ENSCAFG00020023498) #24 MPLKIP (ENSCAFG00020023490) #25 CDK13 (ENSCAFG00020023450) #26 ENSCAFG00020023440 RALA (ENSCAFG00020023437) #28 YAE1 (ENSCAFG00020023432) #29 ENSCAFG00020023429 POU6F2 (ENSCAFG00020023412) #30 VPS41 (ENSCAFG00020023396) AMPH (ENSCAFG00020023336) ENSCAFG00020023317 ENSCAFG00020023314 ENSCAFG00020023310 Dog MODERN SPECIES 9 ENSCAFG00845011149 ENSCAFG00845011171 VSTM2A (ENSCAFG00845011213) SEC61G (ENSCAFG00845011317) EGFR (ENSCAFG00845011396) LANCL2 (ENSCAFG00845011534) ENSCAFG00845011646 BLVRA (ENSCAFG00845011746) COA1 (ENSCAFG00845011827) STK17A (ENSCAFG00845011865) HECW1 (ENSCAFG00845017152) ENSCAFG00845017883 MRPL32 (ENSCAFG00845017918) PSMA2 (ENSCAFG00845017988) C18H7orf25 (ENSCAFG00845018090) GLI3 (ENSCAFG00845018240) #22 INHBA (ENSCAFG00845018632) #23 ENSCAFG00845018696 SUGCT (ENSCAFG00845018864) #24 MPLKIP (ENSCAFG00845019316) #25 CDK13 (ENSCAFG00845019359) #26 RALA (ENSCAFG00845019538) #28 YAE1 (ENSCAFG00845019598) #29 POU6F2 (ENSCAFG00845019684) #30 ENSCAFG00845019954 VPS41 (ENSCAFG00845020061) AMPH (ENSCAFG00845020583) ENSCAFG00845021281 ENSCAFG00845021399 ENSCAFG00845021625 ENSCAFG00845021676 Red fox MODERN SPECIES 60 ENSVVUG00000009985 ENSVVUG00000009930 VSTM2A (ENSVVUG00000009907) SEC61G (ENSVVUG00000009901) EGFR (ENSVVUG00000009879) LANCL2 (ENSVVUG00000009848) VOPP1 (ENSVVUG00000009822) BLVRA (ENSVVUG00000009819) COA1 (ENSVVUG00000009797) STK17A (ENSVVUG00000009792) ENSVVUG00000009786 HECW1 (ENSVVUG00000006733) MRPL32 (ENSVVUG00000006632) PSMA2 (ENSVVUG00000006556) CUNH7orf25 (ENSVVUG00000006554) GLI3 (ENSVVUG00000006139) #22 INHBA (ENSVVUG00000006107) #23 ENSVVUG00000006098 ENSVVUG00000006053 SUGCT (ENSVVUG00000005947) #24 MPLKIP (ENSVVUG00000005927) #25 CDK13 (ENSVVUG00000005637) #26 ENSVVUG00000005608 RALA (ENSVVUG00000005586) #28 YAE1 (ENSVVUG00000005580) #29 ENSVVUG00000005573 #30 ENSVVUG00000005547 ENSVVUG00000005535 VPS41 (ENSVVUG00000005485) AMPH (ENSVVUG00000005432) ENSVVUG00000005411 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ENSGT00940000153143.a.b.b.a.b.d.a.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 Mustelinae ANCESTRAL SPECIES 85 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a American mink MODERN SPECIES 380 GLI3 (ENSNVIG00000024274) #22 INHBA (ENSNVIG00000024272) #23 ENSNVIG00000024270 Ferret MODERN SPECIES 165 DDC (ENSMPUG00000018159) GRB10 (ENSMPUG00000018158) COBL (ENSMPUG00000018157) VSTM2A (ENSMPUG00000018155) SEC61G (ENSMPUG00000018154) EGFR (ENSMPUG00000018153) LANCL2 (ENSMPUG00000018152) VOPP1 (ENSMPUG00000018151) BLVRA (ENSMPUG00000018150) COA1 (ENSMPUG00000018149) STK17A (ENSMPUG00000018148) ENSMPUG00000018147 ENSMPUG00000018146 PSMA2 (ENSMPUG00000018145) C7orf25 (ENSMPUG00000018144) GLI3 (ENSMPUG00000018143) #22 INHBA (ENSMPUG00000018142) #23 ENSMPUG00000018141 ENSMPUG00000018140 SUGCT (ENSMPUG00000018139) #24 MPLKIP (ENSMPUG00000018138) #25 CDK13 (ENSMPUG00000018137) #26 ENSMPUG00000018136 RALA (ENSMPUG00000018135) #28 ENSMPUG00000018134 YAE1 (ENSMPUG00000018133) #29 POU6F2 (ENSMPUG00000018132) #30 VPS41 (ENSMPUG00000018131) ENSMPUG00000018130 AMPH (ENSMPUG00000018129) Ursidae ANCESTRAL SPECIES 12 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y.b ENSGT00390000011179.y.a ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.eb ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ENSGT00940000153143.a.b.b.a.b.d.a.a Giant Panda MODERN SPECIES GRB10 (ENSAMEG00000007889) ENSAMEG00000029865 COBL (ENSAMEG00000007862) ENSAMEG00000025603 VSTM2A (ENSAMEG00000015904) LANCL2 (ENSAMEG00000009212) ENSAMEG00000030622 ENSAMEG00000017495 ENSAMEG00000017491 BLVRA (ENSAMEG00000017487) ENSAMEG00000009377 STK17A (ENSAMEG00000009381) HECW1 (ENSAMEG00000009403) MRPL32 (ENSAMEG00000009422) PSMA2 (ENSAMEG00000009463) GLI3 (ENSAMEG00000008405) #22 INHBA (ENSAMEG00000008401) #23 SUGCT (ENSAMEG00000008389) #24 MPLKIP (ENSAMEG00000008385) #25 CDK13 (ENSAMEG00000008368) #26 ENSAMEG00000008355 #28 YAE1 (ENSAMEG00000008311) #29 ENSAMEG00000029042 #30 VPS41 (ENSAMEG00000008248) AMPH (ENSAMEG00000008197) ENSAMEG00000030993 ENSAMEG00000025931 ENSAMEG00000030076 ENSAMEG00000030382 ENSAMEG00000029209 ENSAMEG00000028940 Ursus ANCESTRAL SPECIES 47 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y.b ENSGT00390000011179.y.a ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.eb ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a ENSGT00940000153143.a.b.b.a.b.d.b.b ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ENSGT00940000153143.a.b.b.a.b.d.a.a Polar bear MODERN SPECIES 254 YKT6 (ENSUMAG00000009731) MYL7 (ENSUMAG00000009737) ENSUMAG00000009769 PGAM2 (ENSUMAG00000009777) ENSUMAG00000009798 ENSUMAG00000009803 ENSUMAG00000009809 BLVRA (ENSUMAG00000009818) COA1 (ENSUMAG00000009824) STK17A (ENSUMAG00000009828) ENSUMAG00000009834 ENSUMAG00000009845 MRPL32 (ENSUMAG00000009855) PSMA2 (ENSUMAG00000009859) C7orf25 (ENSUMAG00000009863) ENSUMAG00000009879 #22 INHBA (ENSUMAG00000009886) #23 SUGCT (ENSUMAG00000009910) #24 MPLKIP (ENSUMAG00000009927) #25 CDK13 (ENSUMAG00000009940) #26 RALA (ENSUMAG00000010042) #28 YAE1 (ENSUMAG00000010045) #29 POU6F2 (ENSUMAG00000010055) #30 VPS41 (ENSUMAG00000010082) AMPH (ENSUMAG00000010258) ENSUMAG00000011063 ENSUMAG00000011067 ENSUMAG00000011076 ENSUMAG00000011080 ENSUMAG00000011085 ENSUMAG00000011092 American black bear DUPLICATION American black bear MODERN SPECIES 1835 ENSUAMG00000021528 #22 American black bear MODERN SPECIES 3333 GLI3 (ENSUAMG00000024750) #22 Atlantogenata ANCESTRAL SPECIES 7 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000171874 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.e.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.b ENSGT00950000184753 ENSGT00940000153143.a.b.b.a.b Xenarthra ANCESTRAL SPECIES ENSGT00940000155925 #22 Sloth MODERN SPECIES 768 GLI3 (ENSCHOG00000003774) #22 Armadillo MODERN SPECIES 4583 GLI3 (ENSDNOG00000049286) #22 Afrotheria ANCESTRAL SPECIES 5 ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000171874 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481.g ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.a.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Afrotheria_a ANCESTRAL SPECIES 5 ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000171874 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481.g ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a.f ENSGT00940000153143.a.b.b.a.a.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Elephant MODERN SPECIES 428 ENSLAFG00000003565 ENSLAFG00000030724 ENSLAFG00000031290 VSTM2A (ENSLAFG00000030452) SEC61G (ENSLAFG00000012700) EGFR (ENSLAFG00000014393) LANCL2 (ENSLAFG00000016836) VOPP1 (ENSLAFG00000016853) BLVRA (ENSLAFG00000011250) STK17A (ENSLAFG00000017171) ENSLAFG00000008021 ENSLAFG00000016339 MRPL32 (ENSLAFG00000011427) PSMA2 (ENSLAFG00000011417) C7orf25 (ENSLAFG00000011416) GLI3 (ENSLAFG00000008944) #22 INHBA (ENSLAFG00000012737) #23 ENSLAFG00000001629 MPLKIP (ENSLAFG00000021487) #25 CDK13 (ENSLAFG00000017946) #26 RALA (ENSLAFG00000017942) #28 YAE1 (ENSLAFG00000026107) #29 POU6F2 (ENSLAFG00000008294) #30 VPS41 (ENSLAFG00000015987) AMPH (ENSLAFG00000015646) ENSLAFG00000032633 ENSLAFG00000025683 ENSLAFG00000027843 STARD3NL (ENSLAFG00000008145) EPDR1 (ENSLAFG00000007489) SFRP4 (ENSLAFG00000022015) Hyrax MODERN SPECIES 707 GLI3 (ENSPCAG00000015092) #22 Tenrec MODERN SPECIES 971 GLI3 (ENSETEG00000003955) #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT01030000234626.C ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT01030000234626.C ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.d.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 Diprotodontia ANCESTRAL SPECIES 61 ENSGT01030000234626.C ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.d.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000154471.a.b.a.a Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT01030000234626.C ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994.tb ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.d.b ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000154471.a.b.a.a koala MODERN SPECIES 152 HERPUD2 (ENSPCIG00000009666) ENSPCIG00000017029 SEPTIN7 (ENSPCIG00000017026) EEPD1 (ENSPCIG00000017032) MATCAP2 (ENSPCIG00000023542) ANLN (ENSPCIG00000025935) AOAH (ENSPCIG00000025938) ENSPCIG00000000677 ENSPCIG00000033160 GPR141 (ENSPCIG00000015085) STK17A (ENSPCIG00000017095) ENSPCIG00000034872 HECW1 (ENSPCIG00000017097) MRPL32 (ENSPCIG00000008901) PSMA2 (ENSPCIG00000008876) GLI3 (ENSPCIG00000027591) #22 INHBA (ENSPCIG00000027590) #23 SUGCT (ENSPCIG00000002929) #24 MPLKIP (ENSPCIG00000002954) #25 CDK13 (ENSPCIG00000003007) #26 RALA (ENSPCIG00000004323) #28 YAE1 (ENSPCIG00000009972) #29 POU6F2 (ENSPCIG00000035047) #30 VPS41 (ENSPCIG00000010608) AMPH (ENSPCIG00000010587) ENSPCIG00000031115 STARD3NL (ENSPCIG00000003468) ENSPCIG00000023195 SFRP4 (ENSPCIG00000033685) BICD2 (ENSPCIG00000023207) ENSPCIG00000023210 Common wonbat MODERN SPECIES 1053 ENSVURG00010016485 EEPD1 (ENSVURG00010016475) ENSVURG00010016467 ENSVURG00010016459 ANLN (ENSVURG00010016396) AOAH (ENSVURG00010016348) ELMO1 (ENSVURG00010013600) GPR141 (ENSVURG00010013484) ENSVURG00010013476 ENSVURG00010013470 STK17A (ENSVURG00010013459) HECW1 (ENSVURG00010013441) MRPL32 (ENSVURG00010013428) ENSVURG00010013418 C7orf25 (ENSVURG00010013415) GLI3 (ENSVURG00010013401) #22 INHBA (ENSVURG00010013385) #23 SUGCT (ENSVURG00010013353) #24 MPLKIP (ENSVURG00010013339) #25 CDK13 (ENSVURG00010012823) #26 ENSVURG00010012796 RALA (ENSVURG00010012785) #28 ENSVURG00010012782 YAE1 (ENSVURG00010012778) #29 POU6F2 (ENSVURG00010012753) #30 VPS41 (ENSVURG00010012728) ENSVURG00010012718 ENSVURG00010012712 ENSVURG00010012703 STARD3NL (ENSVURG00010012693) EPDR1 (ENSVURG00010012685) Wallaby MODERN SPECIES 1605 GLI3 (ENSMEUG00000013134) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000006345 ENSSHAG00000027246 ENSSHAG00000030865 ENSSHAG00000006029 ENSSHAG00000003788 ENSSHAG00000025832 MATCAP2 (ENSSHAG00000003634) AOAH (ENSSHAG00000022160) ENSSHAG00000022454 ENSSHAG00000001536 ENSSHAG00000031695 HECW1 (ENSSHAG00000026205) ENSSHAG00000005433 PSMA2 (ENSSHAG00000005564) C7orf25 (ENSSHAG00000027763) GLI3 (ENSSHAG00000009727) #22 INHBA (ENSSHAG00000026238) #23 SUGCT (ENSSHAG00000001316) #24 MPLKIP (ENSSHAG00000021509) #25 CDK13 (ENSSHAG00000012296) #26 RALA (ENSSHAG00000027620) #28 YAE1 (ENSSHAG00000021352) #29 POU6F2 (ENSSHAG00000026712) #30 VPS41 (ENSSHAG00000003647) ENSSHAG00000026440 ENSSHAG00000005261 ENSSHAG00000028189 ENSSHAG00000031474 ENSSHAG00000020715 ENSSHAG00000031848 ENSSHAG00000029508 Opossum MODERN SPECIES 315 GPR141 (ENSMODG00000022860) ENSMODG00000022859 ENSMODG00000038952 ENSMODG00000047644 ENSMODG00000049982 HECW1 (ENSMODG00000002297) MRPL32 (ENSMODG00000002310) PSMA2 (ENSMODG00000045934) C7orf25 (ENSMODG00000022858) ENSMODG00000044626 GLI3 (ENSMODG00000002714) #22 INHBA (ENSMODG00000002721) #23 Platypus MODERN SPECIES 15 CUL1 (ENSOANG00000000278) CNTNAP2 (ENSOANG00000008137) TPK1 (ENSOANG00000020728) SEC61G (ENSOANG00000038899) EGFR (ENSOANG00000010685) LANCL2 (ENSOANG00000010686) VOPP1 (ENSOANG00000010687) BLVRA (ENSOANG00000010688) ENSOANG00000049855 STK17A (ENSOANG00000048615) HECW1 (ENSOANG00000010691) MRPL32 (ENSOANG00000045346) PSMA2 (ENSOANG00000010697) ENSOANG00000039786 C7orf25 (ENSOANG00000010698) GLI3 (ENSOANG00000010699) #22 INHBA (ENSOANG00000010700) #23 SUGCT (ENSOANG00000010701) #24 ENSOANG00000020698 ENSOANG00000041944 PLEC (ENSOANG00000044463) ENSOANG00000013123 GRINA (ENSOANG00000036441) ENSOANG00000015137 OPLAH (ENSOANG00000015139) EXOSC4 (ENSOANG00000043411) GPAA1 (ENSOANG00000014903) CYC1 (ENSOANG00000038322) ENSOANG00000046359 MAF1 (ENSOANG00000014615) ENSOANG00000029883 Sauria ANCESTRAL SPECIES ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b.a ENSGT00940000155476 ENSGT00940000161910 Archelosauria ANCESTRAL SPECIES 6 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.b.a ENSGT00940000155476 Cryptodira ANCESTRAL SPECIES 4 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.b.a ENSGT00940000155476 Chinese turtle MODERN SPECIES 1165 ENSPSIG00000002056 TPK1 (ENSPSIG00000005896) SEC61G (ENSPSIG00000005732) ENSPSIG00000005716 EGFR (ENSPSIG00000004403) LANCL2 (ENSPSIG00000004380) VOPP1 (ENSPSIG00000018109) BLVRA (ENSPSIG00000018103) COA1 (ENSPSIG00000018101) STK17A (ENSPSIG00000018051) HECW1 (ENSPSIG00000017946) MRPL32 (ENSPSIG00000017913) PSMA2 (ENSPSIG00000017910) C7orf25 (ENSPSIG00000017908) GLI3 (ENSPSIG00000017804) #22 INHBA (ENSPSIG00000017783) #23 ENSPSIG00000002054 SUGCT (ENSPSIG00000017754) #24 CDK13 (ENSPSIG00000017710) #26 RALA (ENSPSIG00000017626) #28 YAE1 (ENSPSIG00000017587) #29 POU6F2 (ENSPSIG00000017568) #30 VPS41 (ENSPSIG00000017194) AMPH (ENSPSIG00000017102) ENSPSIG00000017099 STARD3NL (ENSPSIG00000017010) EPDR1 (ENSPSIG00000017008) SFRP4 (ENSPSIG00000016980) NME8 (ENSPSIG00000016965) ENSPSIG00000016925 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00940000155925.rb #22 Emydidae ANCESTRAL SPECIES ENSGT00940000155925.rb #22 Three-toed box turtle MODERN SPECIES 83 ENSTMTG00000004398 ENSTMTG00000004379 ENSTMTG00000004364 ENSTMTG00000004356 ENSTMTG00000004312 ENSTMTG00000004305 ENSTMTG00000004265 ENSTMTG00000004237 ENSTMTG00000004213 ENSTMTG00000004185 ENSTMTG00000004163 ENSTMTG00000003511 ENSTMTG00000003402 ENSTMTG00000003390 ENSTMTG00000003366 ENSTMTG00000003358 #22 ENSTMTG00000003322 #22 ENSTMTG00000003311 #23 ENSTMTG00000003290 #24 ENSTMTG00000003279 #25 ENSTMTG00000003261 #26 ENSTMTG00000003243 #28 ENSTMTG00000003231 #29 ENSTMTG00000003213 #30 ENSTMTG00000003170 ENSTMTG00000003160 ENSTMTG00000003139 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b.b.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925.sb.a #22 ENSGT00960000190657 ENSGT00940000155925.sb.b #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.b.a Emydidae ANCESTRAL SPECIES 61 ENSGT00390000001319 ENSGT00390000001347.q.b.a ENSGT00390000001347.q.b.b.a ENSGT00390000001347.q.b.b.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925.sb.a #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a Three-toed box turtle MODERN SPECIES 85 ENSTMTG00000015353 ENSTMTG00000015340 ENSTMTG00000015335 ENSTMTG00000015313 #22 ENSTMTG00000015305 #23 ENSTMTG00000015276 #24 ENSTMTG00000015269 #25 ENSTMTG00000015216 #26 RALA (ENSTMTG00000015208) #28 ENSTMTG00000015203 #29 ENSTMTG00000015123 #30 ENSTMTG00000015075 ENSTMTG00000015054 ENSTMTG00000015022 painted turtle MODERN SPECIES 724 AOAH (ENSCPBG00000024977) ANLN (ENSCPBG00000024972) MATCAP2 (ENSCPBG00000024967) EEPD1 (ENSCPBG00000024961) SEPTIN7 (ENSCPBG00000024955) EPDR1 (ENSCPBG00000024948) SFRP4 (ENSCPBG00000024945) NME8 (ENSCPBG00000024938) ENSCPBG00000024932 ENSCPBG00000024926 ENSCPBG00000024921 ENSCPBG00000024918 STARD3NL (ENSCPBG00000024914) AMPH (ENSCPBG00000024907) ENSCPBG00000024905 GLI3 (ENSCPBG00000024898) #22 INHBA (ENSCPBG00000024895) #23 ENSCPBG00000024892 SUGCT (ENSCPBG00000024889) #24 MPLKIP (ENSCPBG00000024885) #25 CDK13 (ENSCPBG00000024855) #26 RALA (ENSCPBG00000024854) #28 ENSCPBG00000024850 YAE1 (ENSCPBG00000024849) #29 POU6F2 (ENSCPBG00000024844) #30 VPS41 (ENSCPBG00000024840) ENSCPBG00000024833 SEC61G (ENSCPBG00000024831) ENSCPBG00000024830 ENSCPBG00000024829 EGFR (ENSCPBG00000024828) Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b.b.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925.sb.a #22 ENSGT00960000190657 ENSGT00940000155925.sb.b #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.b.a ENSGT00940000153143.a.b.a.b.b ENSGT00940000153143.a.b.a.a.b Abingdon island giant tortoise MODERN SPECIES 1755 TPK1 (ENSCABG00000001274) SEC61G (ENSCABG00000001268) ENSCABG00000001266 ENSCABG00000001263 ENSCABG00000001249 ENSCABG00000001238 LANCL2 (ENSCABG00000001233) VOPP1 (ENSCABG00000001223) BLVRA (ENSCABG00000001215) COA1 (ENSCABG00000001208) ENSCABG00000001206 HECW1 (ENSCABG00000000619) MRPL32 (ENSCABG00000000584) PSMA2 (ENSCABG00000000578) C7orf25 (ENSCABG00000000568) GLI3 (ENSCABG00000000545) #22 INHBA (ENSCABG00000000528) #23 MPLKIP (ENSCABG00000000518) #25 CDK13 (ENSCABG00000000422) #26 RALA (ENSCABG00000000393) #28 YAE1 (ENSCABG00000000381) #29 ENSCABG00000000371 #30 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00390000001319 ENSGT00390000001347.q.b.b.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925.sb.a #22 ENSGT00960000190657 ENSGT00940000155925.sb.b #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.b.a ENSGT00940000153143.a.b.a.b.b ENSGT00940000153143.a.b.b.a Testudinidae ANCESTRAL SPECIES 1 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b.b.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925.sb.a #22 ENSGT00960000190657 ENSGT00940000155925.sb.b #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.b.a ENSGT00940000153143.a.b.a.b.b ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.b.a ENSGT00940000155476 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 11 TPK1 (ENSGEVG00005009414) SEC61G (ENSGEVG00005009381) ENSGEVG00005009320 ENSGEVG00005009283 EGFR (ENSGEVG00005008912) LANCL2 (ENSGEVG00005008758) BLVRA (ENSGEVG00005008740) VOPP1 (ENSGEVG00005008715) STK17A (ENSGEVG00005008698) COA1 (ENSGEVG00005008672) HECW1 (ENSGEVG00005008218) MRPL32 (ENSGEVG00005008121) PSMA2 (ENSGEVG00005008107) C7orf25 (ENSGEVG00005008083) ENSGEVG00005008058 ENSGEVG00005008044 #22 ENSGEVG00005007961 #22 INHBA (ENSGEVG00005007926) #23 SUGCT (ENSGEVG00005007876) #24 MPLKIP (ENSGEVG00005007861) #25 CDK13 (ENSGEVG00005007718) #26 RALA (ENSGEVG00005007679) #28 YAE1 (ENSGEVG00005007590) #29 POU6F2 (ENSGEVG00005007472) #30 VPS41 (ENSGEVG00005007364) ENSGEVG00005007210 ENSGEVG00005007188 ENSGEVG00005007175 ENSGEVG00005007154 ENSGEVG00005007133 ENSGEVG00005007108 Goode s thornscrub tortoise MODERN SPECIES 11 SEC61G (ENSGEVG00005009381) ENSGEVG00005009320 ENSGEVG00005009283 EGFR (ENSGEVG00005008912) LANCL2 (ENSGEVG00005008758) BLVRA (ENSGEVG00005008740) VOPP1 (ENSGEVG00005008715) STK17A (ENSGEVG00005008698) COA1 (ENSGEVG00005008672) HECW1 (ENSGEVG00005008218) MRPL32 (ENSGEVG00005008121) PSMA2 (ENSGEVG00005008107) C7orf25 (ENSGEVG00005008083) ENSGEVG00005008058 ENSGEVG00005008044 #22 ENSGEVG00005007961 #22 INHBA (ENSGEVG00005007926) #23 SUGCT (ENSGEVG00005007876) #24 MPLKIP (ENSGEVG00005007861) #25 CDK13 (ENSGEVG00005007718) #26 RALA (ENSGEVG00005007679) #28 YAE1 (ENSGEVG00005007590) #29 POU6F2 (ENSGEVG00005007472) #30 VPS41 (ENSGEVG00005007364) ENSGEVG00005007210 ENSGEVG00005007188 ENSGEVG00005007175 ENSGEVG00005007154 ENSGEVG00005007133 ENSGEVG00005007108 ENSGEVG00005007079 Emydidae ANCESTRAL SPECIES ENSGT00940000155925.sb.b #22 Three-toed box turtle MODERN SPECIES 83 ENSTMTG00000004379 ENSTMTG00000004364 ENSTMTG00000004356 ENSTMTG00000004312 ENSTMTG00000004305 ENSTMTG00000004265 ENSTMTG00000004237 ENSTMTG00000004213 ENSTMTG00000004185 ENSTMTG00000004163 ENSTMTG00000003511 ENSTMTG00000003402 ENSTMTG00000003390 ENSTMTG00000003366 ENSTMTG00000003358 #22 ENSTMTG00000003322 #22 ENSTMTG00000003311 #23 ENSTMTG00000003290 #24 ENSTMTG00000003279 #25 ENSTMTG00000003261 #26 ENSTMTG00000003243 #28 ENSTMTG00000003231 #29 ENSTMTG00000003213 #30 ENSTMTG00000003170 ENSTMTG00000003160 ENSTMTG00000003139 Archosauria ANCESTRAL SPECIES ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.a ENSGT00940000153143.a.b.a.a.a ENSGT00940000155476 Australian saltwater crocodile MODERN SPECIES CUL1 (ENSCPRG00005012085) CNTNAP2 (ENSCPRG00005012040) TPK1 (ENSCPRG00005011870) SEC61G (ENSCPRG00005011725) ENSCPRG00005011724 EGFR (ENSCPRG00005011649) LANCL2 (ENSCPRG00005011572) VOPP1 (ENSCPRG00005011565) BLVRA (ENSCPRG00005011518) COA1 (ENSCPRG00005011516) STK17A (ENSCPRG00005011469) HECW1 (ENSCPRG00005011450) ENSCPRG00005011388 MRPL32 (ENSCPRG00005011386) C7orf25 (ENSCPRG00005011382) GLI3 (ENSCPRG00005011346) #22 INHBA (ENSCPRG00005011294) #23 SUGCT (ENSCPRG00005011264) #24 MPLKIP (ENSCPRG00005011240) #25 CDK13 (ENSCPRG00005011183) #26 RALA (ENSCPRG00005011156) #28 ENSCPRG00005011146 ENSCPRG00005011144 ENSCPRG00005011142 POU6F2 (ENSCPRG00005011132) #30 VPS41 (ENSCPRG00005011046) AMPH (ENSCPRG00005011025) ENSCPRG00005011009 ENSCPRG00005011006 ENSCPRG00005011000 ENSCPRG00005010992 Aves ANCESTRAL SPECIES 24 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.a.a.a ENSGT00940000153143.a.b.a.b ENSGT00940000153143.a.a African ostrich MODERN SPECIES 767 TPK1 (ENSSCUG00000011793) SEC61G (ENSSCUG00000011794) ENSSCUG00000011795 EGFR (ENSSCUG00000011799) LANCL2 (ENSSCUG00000011800) VOPP1 (ENSSCUG00000011801) BLVRA (ENSSCUG00000011803) COA1 (ENSSCUG00000011805) STK17A (ENSSCUG00000011807) HECW1 (ENSSCUG00000011817) MRPL32 (ENSSCUG00000011824) PSMA2 (ENSSCUG00000011825) C7orf25 (ENSSCUG00000011826) GLI3 (ENSSCUG00000011829) #22 INHBA (ENSSCUG00000011831) #23 SUGCT (ENSSCUG00000011834) #24 CDK13 (ENSSCUG00000011837) #26 RALA (ENSSCUG00000011839) #28 YAE1 (ENSSCUG00000011840) #29 POU6F2 (ENSSCUG00000011841) #30 VPS41 (ENSSCUG00000011848) AMPH (ENSSCUG00000011855) ENSSCUG00000011873 ENSSCUG00000011874 Neognathae ANCESTRAL SPECIES ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.a.a.a ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503 Galloanserae ANCESTRAL SPECIES ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503.d ENSGT00940000156503.c Anatidae ANCESTRAL SPECIES 1 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.a.a.a ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503.d Duck DUPLICATION Duck MODERN SPECIES 10 TPK1 (ENSAPLG00000002852) ENSAPLG00000021755 SEC61G (ENSAPLG00000002944) EGFR (ENSAPLG00000002987) LANCL2 (ENSAPLG00000003579) VOPP1 (ENSAPLG00000018488) BLVRA (ENSAPLG00000003819) ENSAPLG00000026019 STK17A (ENSAPLG00000003875) HECW1 (ENSAPLG00000004015) ENSAPLG00000029678 ENSAPLG00000028375 MRPL32 (ENSAPLG00000004159) PSMA2 (ENSAPLG00000022687) C7orf25 (ENSAPLG00000000791) GLI3 (ENSAPLG00000004361) #22 ENSAPLG00000030837 INHBA (ENSAPLG00000018903) #23 SUGCT (ENSAPLG00000004741) #24 MPLKIP (ENSAPLG00000030999) #25 CDK13 (ENSAPLG00000004750) #26 RALA (ENSAPLG00000004950) #28 ENSAPLG00000005034 YAE1 (ENSAPLG00000005137) #29 ENSAPLG00000019588 POU6F2 (ENSAPLG00000005140) #30 VPS41 (ENSAPLG00000005152) AMPH (ENSAPLG00000005709) LRRFIP2 (ENSAPLG00000010430) GOLGA4 (ENSAPLG00000010196) ENSAPLG00000024831 Duck MODERN SPECIES 25 ITGA4 (ENSAPLG00000011547) UBE2E3 (ENSAPLG00000011305) THSD7B (ENSAPLG00000002773) ERCC3 (ENSAPLG00000012068) CYP27C1 (ENSAPLG00000012186) BIN1 (ENSAPLG00000012452) GYPC (ENSAPLG00000013213) CNTNAP5 (ENSAPLG00000013229) MRAS (ENSAPLG00000013435) TMEM177 (ENSAPLG00000001672) PTPN4 (ENSAPLG00000013704) EPB41L5 (ENSAPLG00000014391) ENSAPLG00000017402 RALB (ENSAPLG00000017843) INHBB (ENSAPLG00000016916) ENSAPLG00000015141 #22 TFCP2L1 (ENSAPLG00000015648) CLASP1 (ENSAPLG00000002082) NIFK (ENSAPLG00000024403) TSN (ENSAPLG00000030910) IQCB1 (ENSAPLG00000002873) EAF2 (ENSAPLG00000003048) SLC15A2 (ENSAPLG00000003151) HSPBAP1 (ENSAPLG00000003995) SLC49A4 (ENSAPLG00000004155) SEMA5B (ENSAPLG00000004815) PDIA5 (ENSAPLG00000005015) SEC22A (ENSAPLG00000005344) ADCY5 (ENSAPLG00000005419) HACD2 (ENSAPLG00000016518) MYLK (ENSAPLG00000005685) Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 105 TPK1 (ENSABRG00000009362) SEC61G (ENSABRG00000009377) ENSABRG00000009385 EGFR (ENSABRG00000009417) LANCL2 (ENSABRG00000009438) VOPP1 (ENSABRG00000009459) BLVRA (ENSABRG00000009477) COA1 (ENSABRG00000009488) STK17A (ENSABRG00000009500) HECW1 (ENSABRG00000009515) MRPL32 (ENSABRG00000009591) PSMA2 (ENSABRG00000009600) C7orf25 (ENSABRG00000009604) GLI3 (ENSABRG00000009626) #22 INHBA (ENSABRG00000009640) #23 SUGCT (ENSABRG00000009661) #24 MPLKIP (ENSABRG00000009693) #25 CDK13 (ENSABRG00000009706) #26 ENSABRG00000009714 RALA (ENSABRG00000009721) #28 ENSABRG00000009736 YAE1 (ENSABRG00000009780) #29 ENSABRG00000000006 #30 Pink-footed goose MODERN SPECIES 147 ENSABRG00000000361 RALB (ENSABRG00000000402) INHBB (ENSABRG00000000445) ENSABRG00000000504 #22 TFCP2L1 (ENSABRG00000000521) CLASP1 (ENSABRG00000001120) NIFK (ENSABRG00000017848) TSN (ENSABRG00000017857) IQCB1 (ENSABRG00000017862) EAF2 (ENSABRG00000017869) SLC15A2 (ENSABRG00000017871) HSPBAP1 (ENSABRG00000017882) SLC49A4 (ENSABRG00000017883) SEMA5B (ENSABRG00000017885) PDIA5 (ENSABRG00000017921) SEC22A (ENSABRG00000017995) ADCY5 (ENSABRG00000018007) HACD2 (ENSABRG00000018022) MYLK (ENSABRG00000018031) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503.c ENSGT00940000159827 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503.c ENSGT00940000159827 ENSGT00940000161762 Turkey MODERN SPECIES 26 SEC61G (ENSMGAG00000012352) EGFR (ENSMGAG00000012330) LANCL2 (ENSMGAG00000012323) VOPP1 (ENSMGAG00000019269) BLVRA (ENSMGAG00000012314) STK17A (ENSMGAG00000012311) HECW1 (ENSMGAG00000012302) MRPL32 (ENSMGAG00000012299) PSMA2 (ENSMGAG00000012294) C7orf25 (ENSMGAG00000015903) GLI3 (ENSMGAG00000012277) #22 INHBA (ENSMGAG00000012273) #23 SUGCT (ENSMGAG00000016958) #24 ENSMGAG00000012248 #26 RALA (ENSMGAG00000012244) #28 ENSMGAG00000018557 YAE1 (ENSMGAG00000012240) #29 ENSMGAG00000012235 #30 ENSMGAG00000022796 #30 ENSMGAG00000017948 #30 VPS41 (ENSMGAG00000012204) ENSMGAG00000012196 ENSMGAG00000019487 ENSMGAG00000012187 ENSMGAG00000023004 LRRFIP2 (ENSMGAG00000012175) Chicken DUPLICATION Chicken MODERN SPECIES 11 TPK1 (ENSGALG00010008248) ENSGALG00010007213 ENSGALG00010007409 SEC61G (ENSGALG00010007401) EGFR (ENSGALG00010007381) LANCL2 (ENSGALG00010007204) VOPP1 (ENSGALG00010007183) ENSGALG00010007145 BLVRA (ENSGALG00010007133) STK17A (ENSGALG00010007925) HECW1 (ENSGALG00010007915) MRPL32 (ENSGALG00010007905) ENSGALG00010007904 PSMA2 (ENSGALG00010007903) C2H7orf25 (ENSGALG00010007902) GLI3 (ENSGALG00010007884) #22 INHBA (ENSGALG00010007868) #23 SUGCT (ENSGALG00010018049) #24 MPLKIP (ENSGALG00010017888) #25 CDK13 (ENSGALG00010017880) #26 RALA (ENSGALG00010017866) #28 ENSGALG00010017833 YAE1 (ENSGALG00010017824) #29 POU6F2 (ENSGALG00010016637) #30 VPS41 (ENSGALG00010016583) AMPH (ENSGALG00010017970) ENSGALG00010017618 ENSGALG00010017624 ENSGALG00010017854 ENSGALG00010017840 ENSGALG00010017827 Chicken MODERN SPECIES 36 PECR (ENSGALG00010021246) TMEM169 (ENSGALG00010021253) MAP3K2 (ENSGALG00010021275) ERCC3 (ENSGALG00010021290) CYP27C1 (ENSGALG00010021299) BIN1 (ENSGALG00010021684) GYPC (ENSGALG00010021698) CNTNAP5 (ENSGALG00010021708) MRAS (ENSGALG00010018670) TMEM177 (ENSGALG00010018764) PTPN4 (ENSGALG00010018829) EPB41L5 (ENSGALG00010018858) ENSGALG00010018874 RALB (ENSGALG00010018919) INHBB (ENSGALG00010018937) GLI2 (ENSGALG00010018968) #22 TFCP2L1 (ENSGALG00010021716) CLASP1 (ENSGALG00010021749) NIFK (ENSGALG00010021759) TSN (ENSGALG00010021772) ARHGEF1 (ENSGALG00010021793) IQCB1 (ENSGALG00010018470) EAF2 (ENSGALG00010018514) SLC15A2 (ENSGALG00010018413) HSPBAP1 (ENSGALG00010018434) SEMA5B (ENSGALG00010018458) PDIA5 (ENSGALG00010021338) SEC22A (ENSGALG00010018524) ADCY6 (ENSGALG00010018531) HACD2 (ENSGALG00010018544) MYLK (ENSGALG00010018627) Japanese quail DUPLICATION Japanese quail MODERN SPECIES 11 SEC61G (ENSCJPG00005000142) EGFR (ENSCJPG00005000163) LANCL2 (ENSCJPG00005000198) VOPP1 (ENSCJPG00005000210) BLVRA (ENSCJPG00005000222) ENSCJPG00005000233 STK17A (ENSCJPG00005000239) HECW1 (ENSCJPG00005000252) MRPL32 (ENSCJPG00005000292) PSMA2 (ENSCJPG00005000303) C7orf25 (ENSCJPG00005000320) TPK1 (ENSCJPG00005000332) CNTNAP2 (ENSCJPG00005000658) CUL1 (ENSCJPG00005006103) EZH2 (ENSCJPG00005006124) GLI3 (ENSCJPG00005006179) #22 INHBA (ENSCJPG00005006189) #23 SUGCT (ENSCJPG00005006209) #24 MPLKIP (ENSCJPG00005006216) #25 CDK13 (ENSCJPG00005006217) #26 RALA (ENSCJPG00005006219) #28 ENSCJPG00005006220 YAE1 (ENSCJPG00005006226) #29 POU6F2 (ENSCJPG00005006245) #30 VPS41 (ENSCJPG00005006272) AMPH (ENSCJPG00005006395) ENSCJPG00005006420 ENSCJPG00005006427 ENSCJPG00005006429 ENSCJPG00005006434 ENSCJPG00005006435 Japanese quail MODERN SPECIES 25 XRCC5 (ENSCJPG00005013067) TMEM169 (ENSCJPG00005013066) PECR (ENSCJPG00005013065) MAP3K2 (ENSCJPG00005013061) ERCC3 (ENSCJPG00005013060) CYP27C1 (ENSCJPG00005013059) BIN1 (ENSCJPG00005013056) GYPC (ENSCJPG00005013052) CNTNAP5 (ENSCJPG00005013048) MRAS (ENSCJPG00005013043) TMEM177 (ENSCJPG00005013042) PTPN4 (ENSCJPG00005012941) EPB41L5 (ENSCJPG00005012940) RALB (ENSCJPG00005012939) INHBB (ENSCJPG00005012938) ENSCJPG00005012936 #22 TFCP2L1 (ENSCJPG00005012935) CLASP1 (ENSCJPG00005002113) NIFK (ENSCJPG00005000944) TSN (ENSCJPG00005000928) ENSCJPG00005000921 IQCB1 (ENSCJPG00005021151) EAF2 (ENSCJPG00005021149) SLC15A2 (ENSCJPG00005021078) HSPBAP1 (ENSCJPG00005021077) SLC49A4 (ENSCJPG00005021076) SEMA5B (ENSCJPG00005021075) PDIA5 (ENSCJPG00005021072) SEC22A (ENSCJPG00005021071) ADCY5 (ENSCJPG00005021068) HACD2 (ENSCJPG00005021067) Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00960000189317 ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.a.a.a ENSGT00530000063564.a Passeriformes ANCESTRAL SPECIES ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00960000190022 ENSGT00960000189317 ENSGT00940000153143.a.b.a.a.b ENSGT00940000153143.a.b.a.a.a Great tit DUPLICATION Great tit MODERN SPECIES 11 CUL1 (ENSPMJG00000018024) CNTNAP2 (ENSPMJG00000018026) TPK1 (ENSPMJG00000018028) SEC61G (ENSPMJG00000018029) EGFR (ENSPMJG00000018030) LANCL2 (ENSPMJG00000018031) VOPP1 (ENSPMJG00000018032) BLVRA (ENSPMJG00000018033) HECW1 (ENSPMJG00000018034) STK17A (ENSPMJG00000018035) COA1 (ENSPMJG00000018036) TNS3 (ENSPMJG00000018037) MRPL32 (ENSPMJG00000018038) PSMA2 (ENSPMJG00000018039) C7orf25 (ENSPMJG00000018040) GLI3 (ENSPMJG00000018041) #22 INHBA (ENSPMJG00000018042) #23 SUGCT (ENSPMJG00000018046) #24 MPLKIP (ENSPMJG00000018047) #25 CDK13 (ENSPMJG00000018048) #26 RALA (ENSPMJG00000018050) #28 ENSPMJG00000018052 YAE1 (ENSPMJG00000018053) #29 HUS1 (ENSPMJG00000018055) ENSPMJG00000018057 NFX1 (ENSPMJG00000018059) ENSPMJG00000018060 PDE1C (ENSPMJG00000018061) ENSPMJG00000018062 NEUROD6 (ENSPMJG00000018063) ITGA9 (ENSPMJG00000018064) Great tit MODERN SPECIES 27 XRCC5 (ENSPMJG00000019766) TMEM169 (ENSPMJG00000019767) PECR (ENSPMJG00000019768) MAP3K2 (ENSPMJG00000019769) ERCC3 (ENSPMJG00000019770) CYP27C1 (ENSPMJG00000019771) BIN1 (ENSPMJG00000019772) GYPC (ENSPMJG00000019773) CNTNAP5 (ENSPMJG00000019774) MRAS (ENSPMJG00000019777) TMEM177 (ENSPMJG00000019778) PTPN4 (ENSPMJG00000019779) EPB41L5 (ENSPMJG00000019780) RALB (ENSPMJG00000019781) INHBB (ENSPMJG00000019782) ENSPMJG00000019783 #22 ENSPMJG00000019784 TFCP2L1 (ENSPMJG00000019785) CLASP1 (ENSPMJG00000019788) NIFK (ENSPMJG00000019872) TSN (ENSPMJG00000019873) ENSPMJG00000019874 IQCB1 (ENSPMJG00000019875) EAF2 (ENSPMJG00000019876) SLC15A2 (ENSPMJG00000019877) HSPBAP1 (ENSPMJG00000019878) SLC49A4 (ENSPMJG00000019879) SEMA5B (ENSPMJG00000019880) PDIA5 (ENSPMJG00000019881) SEC22A (ENSPMJG00000019883) ADCY5 (ENSPMJG00000019884) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a.b ENSGT00960000190022 ENSGT00960000189317 ENSGT00940000153143.a.b.a.a.b ENSGT00530000063564.a Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00960000190022 ENSGT00960000189317 ENSGT00960000189447 ENSGT00530000063564.a ENSGT00730000111139 Medium ground finch MODERN SPECIES 96 EGFR (ENSGFOG00000006484) LANCL2 (ENSGFOG00000006387) VOPP1 (ENSGFOG00000006377) BLVRA (ENSGFOG00000006368) COA1 (ENSGFOG00000006359) STK17A (ENSGFOG00000006349) HECW1 (ENSGFOG00000006006) MRPL32 (ENSGFOG00000005947) PSMA2 (ENSGFOG00000005943) C7orf25 (ENSGFOG00000005939) GLI3 (ENSGFOG00000005932) #22 INHBA (ENSGFOG00000005930) #23 SUGCT (ENSGFOG00000005923) #24 ENSGFOG00000005917 #26 ENSGFOG00000005913 RALA (ENSGFOG00000005906) #28 YAE1 (ENSGFOG00000005898) #29 POU6F2 (ENSGFOG00000005890) #30 ENSGFOG00000005884 VPS41 (ENSGFOG00000005873) AMPH (ENSGFOG00000005869) Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00960000190022 ENSGT00960000189317 ENSGT00960000189447 ENSGT00530000063564.a ENSGT00730000111139 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 12 CUL1 (ENSTGUG00000001790) CNTNAP2 (ENSTGUG00000001794) TPK1 (ENSTGUG00000001803) SEC61G (ENSTGUG00000021195) EGFR (ENSTGUG00000001806) LANCL2 (ENSTGUG00000020824) VOPP1 (ENSTGUG00000001812) BLVRA (ENSTGUG00000001814) ENSTGUG00000021649 COA1 (ENSTGUG00000022951) STK17A (ENSTGUG00000029061) HECW1 (ENSTGUG00000001817) MRPL32 (ENSTGUG00000001824) PSMA2 (ENSTGUG00000001827) C7orf25 (ENSTGUG00000001831) GLI3 (ENSTGUG00000001834) #22 INHBA (ENSTGUG00000001843) #23 SUGCT (ENSTGUG00000001844) #24 ENSTGUG00000025137 MPLKIP (ENSTGUG00000001848) #25 CDK13 (ENSTGUG00000001850) #26 RALA (ENSTGUG00000001854) #28 ENSTGUG00000001857 YAE1 (ENSTGUG00000020380) #29 POU6F2 (ENSTGUG00000001859) #30 VPS41 (ENSTGUG00000001860) AMPH (ENSTGUG00000001869) ENSTGUG00000001876 LRRFIP2 (ENSTGUG00000001878) GOLGA4 (ENSTGUG00000001889) ITGA9 (ENSTGUG00000001897) Zebra finch MODERN SPECIES 29 XRCC5 (ENSTGUG00000005014) TMEM169 (ENSTGUG00000026916) PECR (ENSTGUG00000024314) MAP3K2 (ENSTGUG00000004975) ERCC3 (ENSTGUG00000004920) CYP27C1 (ENSTGUG00000004904) BIN1 (ENSTGUG00000004882) GYPC (ENSTGUG00000019495) CNTNAP5 (ENSTGUG00000004748) MRAS (ENSTGUG00000004727) TMEM177 (ENSTGUG00000004726) PTPN4 (ENSTGUG00000004689) EPB41L5 (ENSTGUG00000004633) RALB (ENSTGUG00000029222) INHBB (ENSTGUG00000018814) ENSTGUG00000004599 #22 TFCP2L1 (ENSTGUG00000004573) CLASP1 (ENSTGUG00000004469) NIFK (ENSTGUG00000004461) TSN (ENSTGUG00000020974) ENSTGUG00000004441 IQCB1 (ENSTGUG00000004420) EAF2 (ENSTGUG00000020224) SLC15A2 (ENSTGUG00000026244) HSPBAP1 (ENSTGUG00000004406) SLC49A4 (ENSTGUG00000004391) SEMA5B (ENSTGUG00000004366) PDIA5 (ENSTGUG00000004344) SEC22A (ENSTGUG00000004336) ADCY5 (ENSTGUG00000004293) HACD2 (ENSTGUG00000025666) Common canary DUPLICATION Common canary MODERN SPECIES 24 CUL1 (ENSSCAG00000015578) CNTNAP2 (ENSSCAG00000015566) TPK1 (ENSSCAG00000015559) SEC61G (ENSSCAG00000015554) EGFR (ENSSCAG00000015542) LANCL2 (ENSSCAG00000015537) VOPP1 (ENSSCAG00000015531) BLVRA (ENSSCAG00000015527) ENSSCAG00000015524 COA1 (ENSSCAG00000015519) STK17A (ENSSCAG00000015513) HECW1 (ENSSCAG00000015506) MRPL32 (ENSSCAG00000015505) PSMA2 (ENSSCAG00000015502) C7orf25 (ENSSCAG00000015500) GLI3 (ENSSCAG00000015495) #22 INHBA (ENSSCAG00000015494) #23 SUGCT (ENSSCAG00000015473) #24 Common canary MODERN SPECIES 8 PECR (ENSSCAG00000012493) MAP3K2 (ENSSCAG00000012489) ENSSCAG00000012460 ERCC3 (ENSSCAG00000012453) CYP27C1 (ENSSCAG00000012448) BIN1 (ENSSCAG00000012432) GYPC (ENSSCAG00000012425) CNTNAP5 (ENSSCAG00000012280) MRAS (ENSSCAG00000012240) TMEM177 (ENSSCAG00000012229) PTPN4 (ENSSCAG00000012204) EPB41L5 (ENSSCAG00000012183) ENSSCAG00000012164 RALB (ENSSCAG00000012158) INHBB (ENSSCAG00000012147) ENSSCAG00000012138 #22 TFCP2L1 (ENSSCAG00000012018) CLASP1 (ENSSCAG00000011981) NIFK (ENSSCAG00000011973) TSN (ENSSCAG00000011970) ENSSCAG00000011967 IQCB1 (ENSSCAG00000011957) EAF2 (ENSSCAG00000011950) SLC15A2 (ENSSCAG00000011937) HSPBAP1 (ENSSCAG00000011928) ENSSCAG00000011921 SLC49A4 (ENSSCAG00000011876) SEMA5B (ENSSCAG00000011850) PDIA5 (ENSSCAG00000011764) SEC22A (ENSSCAG00000011735) ADCY5 (ENSSCAG00000011730) Flycatcher DUPLICATION Flycatcher MODERN SPECIES 11 ENSFALG00000024233 LANCL2 (ENSFALG00000026759) VOPP1 (ENSFALG00000026362) ENSFALG00000026735 ENSFALG00000024905 ENSFALG00000023596 BLVRA (ENSFALG00000028857) ENSFALG00000024388 ENSFALG00000025406 COA1 (ENSFALG00000005023) STK17A (ENSFALG00000028529) HECW1 (ENSFALG00000005053) MRPL32 (ENSFALG00000027975) PSMA2 (ENSFALG00000005082) C7orf25 (ENSFALG00000014114) GLI3 (ENSFALG00000005113) #22 INHBA (ENSFALG00000005123) #23 SUGCT (ENSFALG00000005131) #24 MPLKIP (ENSFALG00000027312) #25 CDK13 (ENSFALG00000005143) #26 RALA (ENSFALG00000027253) #28 ENSFALG00000025369 YAE1 (ENSFALG00000027550) #29 POU6F2 (ENSFALG00000005224) #30 VPS41 (ENSFALG00000005238) AMPH (ENSFALG00000012192) ENSFALG00000012205 ENSFALG00000023119 LRRFIP2 (ENSFALG00000012219) ENSFALG00000013077 ITGA9 (ENSFALG00000013091) Flycatcher MODERN SPECIES 26 TMEM169 (ENSFALG00000003970) PECR (ENSFALG00000003963) MAP3K2 (ENSFALG00000003953) ERCC3 (ENSFALG00000003936) CYP27C1 (ENSFALG00000003928) BIN1 (ENSFALG00000003924) GYPC (ENSFALG00000003921) CNTNAP5 (ENSFALG00000013187) ENSFALG00000013196 TMEM177 (ENSFALG00000014091) PTPN4 (ENSFALG00000013202) EPB41L5 (ENSFALG00000013207) ENSFALG00000024980 RALB (ENSFALG00000027363) INHBB (ENSFALG00000025610) ENSFALG00000013217 #22 TFCP2L1 (ENSFALG00000013230) CLASP1 (ENSFALG00000013233) NIFK (ENSFALG00000013238) TSN (ENSFALG00000026940) ENSFALG00000023350 IQCB1 (ENSFALG00000013262) ENSFALG00000013268 SLC15A2 (ENSFALG00000013274) HSPBAP1 (ENSFALG00000024337) SLC49A4 (ENSFALG00000013288) SEMA5B (ENSFALG00000013300) PDIA5 (ENSFALG00000013311) SEC22A (ENSFALG00000013337) ADCY5 (ENSFALG00000013350) HACD2 (ENSFALG00000027287) Neognathae_c ANCESTRAL SPECIES 1 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00960000189317 ENSGT00940000153143.a.b.a.a.b ENSGT00530000063564.a ENSGT00730000111139 ENSGT00940000156503 Golden eagle MODERN SPECIES 19 CUL1 (ENSACCG00020003972) CNTNAP2 (ENSACCG00020004149) TPK1 (ENSACCG00020004314) SEC61G (ENSACCG00020004321) ENSACCG00020004331 EGFR (ENSACCG00020004341) LANCL2 (ENSACCG00020004351) VOPP1 (ENSACCG00020004361) BLVRA (ENSACCG00020004370) COA1 (ENSACCG00020004380) STK17A (ENSACCG00020004387) HECW1 (ENSACCG00020004403) MRPL32 (ENSACCG00020004436) PSMA2 (ENSACCG00020004444) C7orf25 (ENSACCG00020004448) GLI3 (ENSACCG00020004461) #22 INHBA (ENSACCG00020004471) #23 SUGCT (ENSACCG00020004494) #24 MPLKIP (ENSACCG00020004525) #25 CDK13 (ENSACCG00020004693) #26 RALA (ENSACCG00020004699) #28 ENSACCG00020004712 YAE1 (ENSACCG00020004724) #29 POU6F2 (ENSACCG00020004747) #30 VPS41 (ENSACCG00020004789) AMPH (ENSACCG00020004821) ENSACCG00020004904 TRGV9 (ENSACCG00020004981) LRRFIP2 (ENSACCG00020005021) GOLGA4 (ENSACCG00020005089) ITGA9 (ENSACCG00020005192) Kakapo DUPLICATION Kakapo DUPLICATION Kakapo MODERN SPECIES TPK1 (ENSSHBG00005013825) ENSSHBG00005013830 SEC61G (ENSSHBG00005013838) ENSSHBG00005000018 ENSSHBG00005000038 ENSSHBG00005000050 LANCL2 (ENSSHBG00005000054) VOPP1 (ENSSHBG00005000058) BLVRA (ENSSHBG00005000063) COA1 (ENSSHBG00005000068) STK17A (ENSSHBG00005000074) HECW1 (ENSSHBG00005000081) MRPL32 (ENSSHBG00005000086) PSMA2 (ENSSHBG00005009895) C7orf25 (ENSSHBG00005009911) ENSSHBG00005009918 #22 ENSSHBG00005009929 #22 ENSSHBG00005009956 ENSSHBG00005009976 INHBA (ENSSHBG00005010004) #23 SUGCT (ENSSHBG00005010027) #24 MPLKIP (ENSSHBG00005010053) #25 CDK13 (ENSSHBG00005010070) #26 RALA (ENSSHBG00005010092) #28 YAE1 (ENSSHBG00005010111) #29 POU6F2 (ENSSHBG00005010129) #30 VPS41 (ENSSHBG00005010160) AMPH (ENSSHBG00005010255) ENSSHBG00005010323 ENSSHBG00005010565 LRRFIP2 (ENSSHBG00005010595) Kakapo MODERN SPECIES ENSSHBG00005013830 SEC61G (ENSSHBG00005013838) ENSSHBG00005000018 ENSSHBG00005000038 ENSSHBG00005000050 LANCL2 (ENSSHBG00005000054) VOPP1 (ENSSHBG00005000058) BLVRA (ENSSHBG00005000063) COA1 (ENSSHBG00005000068) STK17A (ENSSHBG00005000074) HECW1 (ENSSHBG00005000081) MRPL32 (ENSSHBG00005000086) PSMA2 (ENSSHBG00005009895) C7orf25 (ENSSHBG00005009911) ENSSHBG00005009918 #22 ENSSHBG00005009929 #22 ENSSHBG00005009956 ENSSHBG00005009976 INHBA (ENSSHBG00005010004) #23 SUGCT (ENSSHBG00005010027) #24 MPLKIP (ENSSHBG00005010053) #25 CDK13 (ENSSHBG00005010070) #26 RALA (ENSSHBG00005010092) #28 YAE1 (ENSSHBG00005010111) #29 POU6F2 (ENSSHBG00005010129) #30 VPS41 (ENSSHBG00005010160) AMPH (ENSSHBG00005010255) ENSSHBG00005010323 ENSSHBG00005010565 LRRFIP2 (ENSSHBG00005010595) GOLGA4 (ENSSHBG00005010661) Kakapo MODERN SPECIES 22 TMEM169 (ENSSHBG00005019882) PECR (ENSSHBG00005019878) MAP3K2 (ENSSHBG00005019872) ERCC3 (ENSSHBG00005019867) CYP27C1 (ENSSHBG00005019864) BIN1 (ENSSHBG00005019859) GYPC (ENSSHBG00005019857) CNTNAP5 (ENSSHBG00005017253) MRAS (ENSSHBG00005016912) TMEM177 (ENSSHBG00005016906) PTPN4 (ENSSHBG00005016891) EPB41L5 (ENSSHBG00005016820) ENSSHBG00005016797 RALB (ENSSHBG00005016778) INHBB (ENSSHBG00005016773) ENSSHBG00005016760 #22 TFCP2L1 (ENSSHBG00005016752) CLASP1 (ENSSHBG00005014747) NIFK (ENSSHBG00005014475) TSN (ENSSHBG00005014465) ENSSHBG00005014452 IQCB1 (ENSSHBG00005014437) EAF2 (ENSSHBG00005014431) SLC15A2 (ENSSHBG00005014420) HSPBAP1 (ENSSHBG00005014410) SLC49A4 (ENSSHBG00005014404) SEMA5B (ENSSHBG00005013784) PDIA5 (ENSSHBG00005013628) SEC22A (ENSSHBG00005013591) ADCY5 (ENSSHBG00005013573) HACD2 (ENSSHBG00005013550) Lepidosauria ANCESTRAL SPECIES 5 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.a ENSGT00940000155994.`b tuatara MODERN SPECIES 1961 MRPL32 (ENSSPUG00000015517) PSMA2 (ENSSPUG00000015533) C7orf25 (ENSSPUG00000015542) GLI3 (ENSSPUG00000015554) #22 Episquamata ANCESTRAL SPECIES 5 ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.a ENSGT00940000155994.`b Toxicofera ANCESTRAL SPECIES 4 ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT00940000155994.`b ENSGT00940000155994.ab Lizard MODERN SPECIES 5 SEC61G (ENSACAG00000034557) ENSACAG00000036015 EGFR (ENSACAG00000017406) LANCL2 (ENSACAG00000017463) VOPP1 (ENSACAG00000043104) ENSACAG00000034782 BLVRA (ENSACAG00000017470) ENSACAG00000026371 COA1 (ENSACAG00000028687) STK17A (ENSACAG00000017481) ENSACAG00000039276 ENSACAG00000041080 HECW1 (ENSACAG00000017492) MRPL32 (ENSACAG00000045596) PSMA2 (ENSACAG00000017511) GLI3 (ENSACAG00000017547) #22 INHBA (ENSACAG00000017576) #23 ENSACAG00000038360 ENSACAG00000045115 ENSACAG00000042768 SUGCT (ENSACAG00000017581) #24 MPLKIP (ENSACAG00000017596) #25 ENSACAG00000017597 #26 RALA (ENSACAG00000017605) #28 YAE1 (ENSACAG00000039349) #29 POU6F2 (ENSACAG00000017612) #30 VPS41 (ENSACAG00000017617) AMPH (ENSACAG00000017651) STARD3NL (ENSACAG00000017658) EPDR1 (ENSACAG00000017665) SFRP4 (ENSACAG00000043956) Elapidae ANCESTRAL SPECIES 5 ENSGT00390000016016.A ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 #22 ENSGT00940000157116.c #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481.c ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT00940000155994.`b ENSGT00390000008749.e Indian cobra DUPLICATION Indian cobra MODERN SPECIES 337 ENSNNAG00000003864 ENSNNAG00000003822 ENSNNAG00000003771 ENSNNAG00000003705 LANCL2 (ENSNNAG00000003304) VOPP1 (ENSNNAG00000003248) BLVRA (ENSNNAG00000003231) COA1 (ENSNNAG00000003213) STK17A (ENSNNAG00000016944) HECW1 (ENSNNAG00000016919) ENSNNAG00000016899 ENSNNAG00000016905 PSMA2 (ENSNNAG00000016886) C7orf25 (ENSNNAG00000016877) ENSNNAG00000016871 ENSNNAG00000016864 #22 ENSNNAG00000016808 #22 ENSNNAG00000016795 INHBA (ENSNNAG00000016787) #23 SUGCT (ENSNNAG00000016772) #24 MPLKIP (ENSNNAG00000016769) #25 CDK13 (ENSNNAG00000016699) #26 RALA (ENSNNAG00000016685) #28 ENSNNAG00000016677 #29 POU6F2 (ENSNNAG00000016626) #30 ENSNNAG00000016613 ENSNNAG00000016605 ENSNNAG00000016597 ENSNNAG00000016573 AMPH (ENSNNAG00000016556) STARD3NL (ENSNNAG00000016543) Indian cobra MODERN SPECIES 337 ENSNNAG00000003822 ENSNNAG00000003771 ENSNNAG00000003705 LANCL2 (ENSNNAG00000003304) VOPP1 (ENSNNAG00000003248) BLVRA (ENSNNAG00000003231) COA1 (ENSNNAG00000003213) STK17A (ENSNNAG00000016944) HECW1 (ENSNNAG00000016919) ENSNNAG00000016899 ENSNNAG00000016905 PSMA2 (ENSNNAG00000016886) C7orf25 (ENSNNAG00000016877) ENSNNAG00000016871 ENSNNAG00000016864 #22 ENSNNAG00000016808 #22 ENSNNAG00000016795 INHBA (ENSNNAG00000016787) #23 SUGCT (ENSNNAG00000016772) #24 MPLKIP (ENSNNAG00000016769) #25 CDK13 (ENSNNAG00000016699) #26 RALA (ENSNNAG00000016685) #28 ENSNNAG00000016677 #29 POU6F2 (ENSNNAG00000016626) #30 ENSNNAG00000016613 ENSNNAG00000016605 ENSNNAG00000016597 ENSNNAG00000016573 AMPH (ENSNNAG00000016556) STARD3NL (ENSNNAG00000016543) EPDR1 (ENSNNAG00000016541) Elapidae_a ANCESTRAL SPECIES 40 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116.c #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481.c ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT00940000155994.`b ENSGT00390000008749.e Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 7523 ENSLLTG00000004243 #22 Blue-lipped sea krait MODERN SPECIES 7193 ENSLLTG00000010770 #22 Acanthophiinae ANCESTRAL SPECIES 41 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116.c #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481.c ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT00940000155994.`b ENSGT00390000008749.e Mainland tiger snake MODERN SPECIES 349 GLI3 (ENSNSUG00000004767) #22 ENSNSUG00000004768 Eastern brown snake MODERN SPECIES 18 LANCL2 (ENSPTXG00000003471) VOPP1 (ENSPTXG00000003470) BLVRA (ENSPTXG00000003468) COA1 (ENSPTXG00000003464) STK17A (ENSPTXG00000003462) HECW1 (ENSPTXG00000001658) MRPL32 (ENSPTXG00000001630) PSMA2 (ENSPTXG00000001626) C7orf25 (ENSPTXG00000001623) ENSPTXG00000001621 ENSPTXG00000001618 ENSPTXG00000001615 ENSPTXG00000001613 ENSPTXG00000001610 ENSPTXG00000001608 GLI3 (ENSPTXG00000001606) #22 ENSPTXG00000001602 ENSPTXG00000001599 #23 ENSPTXG00000001595 SUGCT (ENSPTXG00000001594) #24 MPLKIP (ENSPTXG00000001593) #25 CDK13 (ENSPTXG00000001591) #26 ENSPTXG00000001589 RALA (ENSPTXG00000001587) #28 ENSPTXG00000001585 #29 POU6F2 (ENSPTXG00000001581) #30 ENSPTXG00000001576 VPS41 (ENSPTXG00000001571) AMPH (ENSPTXG00000001568) ENSPTXG00000001567 STARD3NL (ENSPTXG00000001565) Laterata ANCESTRAL SPECIES 39 ENSGT00390000016016.A ENSGT00390000001319 ENSGT01010000224040 ENSGT00390000001347.q.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 ENSGT01030000234518.E.c.a ENSGT00940000155994.`b Argentine black and white tegu MODERN SPECIES 62 EGFR (ENSSMRG00000019090) LANCL2 (ENSSMRG00000019089) VOPP1 (ENSSMRG00000019088) BLVRA (ENSSMRG00000019086) COA1 (ENSSMRG00000019085) STK17A (ENSSMRG00000019084) HECW1 (ENSSMRG00000019083) MRPL32 (ENSSMRG00000019082) PSMA2 (ENSSMRG00000019081) C7orf25 (ENSSMRG00000019080) GLI3 (ENSSMRG00000019078) #22 INHBA (ENSSMRG00000019077) #23 SUGCT (ENSSMRG00000019076) #24 MPLKIP (ENSSMRG00000019075) #25 CDK13 (ENSSMRG00000019074) #26 RALA (ENSSMRG00000019073) #28 ENSSMRG00000019072 ENSSMRG00000019071 ENSSMRG00000019070 POU6F2 (ENSSMRG00000019069) #30 VPS41 (ENSSMRG00000019068) AMPH (ENSSMRG00000019067) STARD3NL (ENSSMRG00000019066) EPDR1 (ENSSMRG00000019065) SFRP4 (ENSSMRG00000019061) ENSSMRG00000019060 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 3 EGFR (ENSPMRG00000016632) ENSPMRG00000016439 LANCL2 (ENSPMRG00000016434) VOPP1 (ENSPMRG00000016426) BLVRA (ENSPMRG00000016423) ENSPMRG00000016421 COA1 (ENSPMRG00000016416) STK17A (ENSPMRG00000016409) HECW1 (ENSPMRG00000016147) ENSPMRG00000016069 ENSPMRG00000016068 ENSPMRG00000016061 ENSPMRG00000016054 PSMA2 (ENSPMRG00000016045) C7orf25 (ENSPMRG00000016040) GLI3 (ENSPMRG00000016011) #22 INHBA (ENSPMRG00000016000) #23 SUGCT (ENSPMRG00000015882) #24 MPLKIP (ENSPMRG00000015844) #25 CDK13 (ENSPMRG00000015785) #26 RALA (ENSPMRG00000015762) #28 YAE1 (ENSPMRG00000015754) #29 POU6F2 (ENSPMRG00000015743) #30 VPS41 (ENSPMRG00000015677) ENSPMRG00000015546 STARD3NL (ENSPMRG00000015515) EPDR1 (ENSPMRG00000015506) ENSPMRG00000015500 NME8 (ENSPMRG00000015486) ENSPMRG00000015482 ENSPMRG00000015477 Common wall lizard MODERN SPECIES BIN1 (ENSPMRG00000019780) ENSPMRG00000019808 GYPC (ENSPMRG00000019819) ENSPMRG00000019827 CNTNAP5 (ENSPMRG00000019834) ENSPMRG00000019842 MRAS (ENSPMRG00000019847) ENSPMRG00000019855 ENSPMRG00000019859 PTPN4 (ENSPMRG00000019861) EPB41L5 (ENSPMRG00000019889) ENSPMRG00000019913 ENSPMRG00000019919 RALB (ENSPMRG00000019921) INHBB (ENSPMRG00000019927) ENSPMRG00000019940 #22 TFCP2L1 (ENSPMRG00000020006) CLASP1 (ENSPMRG00000020418) TSN (ENSPMRG00000021686) ENSPMRG00000021694 IQCB1 (ENSPMRG00000021723) EAF2 (ENSPMRG00000021806) SLC15A2 (ENSPMRG00000021823) HSPBAP1 (ENSPMRG00000021852) SLC49A4 (ENSPMRG00000021859) SEMA5B (ENSPMRG00000021933) PDIA5 (ENSPMRG00000000097) SEC22A (ENSPMRG00000000118) ADCY5 (ENSPMRG00000000497) HACD2 (ENSPMRG00000001136) MYLK (ENSPMRG00000001667) Anura ANCESTRAL SPECIES 71 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00940000154136 ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870 ENSGT00390000014722 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582.o #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a.l ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 8 LANCL2 (ENSLLEG00000007740) ENSLLEG00000007927 ENSLLEG00000007936 VOPP1 (ENSLLEG00000007950) BLVRA (ENSLLEG00000007969) ENSLLEG00000007995 ENSLLEG00000008068 STK17A (ENSLLEG00000008092) HECW1 (ENSLLEG00000008186) ENSLLEG00000008550 MRPL32 (ENSLLEG00000008598) PSMA2 (ENSLLEG00000008628) ENSLLEG00000008711 ENSLLEG00000008792 ENSLLEG00000008818 GLI3 (ENSLLEG00000008862) #22 INHBA (ENSLLEG00000009251) #23 ENSLLEG00000009313 ENSLLEG00000009328 SUGCT (ENSLLEG00000009369) #24 ENSLLEG00000009741 ENSLLEG00000009770 MPLKIP (ENSLLEG00000009797) #25 CDK13 (ENSLLEG00000009879) #26 RALA (ENSLLEG00000010011) #28 ENSLLEG00000010099 ENSLLEG00000010126 ENSLLEG00000010159 YAE1 (ENSLLEG00000010386) #29 TBX20 (ENSLLEG00000010423) HERPUD2 (ENSLLEG00000010499) Leishan spiny toad MODERN SPECIES 10 CNTNAP5 (ENSLLEG00000021689) ENSLLEG00000021590 ENSLLEG00000021554 ENSLLEG00000021538 ENSLLEG00000021506 ENSLLEG00000021480 MRAS (ENSLLEG00000021401) TMEM177 (ENSLLEG00000021368) PTPN4 (ENSLLEG00000020797) EPB41L5 (ENSLLEG00000020418) ENSLLEG00000020361 RALB (ENSLLEG00000020314) ENSLLEG00000020287 ENSLLEG00000020244 INHBB (ENSLLEG00000020214) ENSLLEG00000019923 #22 ENSLLEG00000019887 STEAP3 (ENSLLEG00000019767) ENSLLEG00000019618 ENSLLEG00000019592 ENSLLEG00000019411 ENSLLEG00000019379 ENSLLEG00000019207 ENSLLEG00000019167 ENSLLEG00000019058 ENSLLEG00000019024 PARP9 (ENSLLEG00000018944) ENSLLEG00000018916 FAIM (ENSLLEG00000018655) ENSLLEG00000018594 ENSLLEG00000018374 Frog DUPLICATION Frog MODERN SPECIES 6 ENSXETG00000046503 tpk1 (ENSXETG00000015845) ENSXETG00000045637 sec61g (ENSXETG00000015843) egfr (ENSXETG00000015826) lancl2 (ENSXETG00000015818) vopp1 (ENSXETG00000027607) blvra (ENSXETG00000015816) coa1 (ENSXETG00000015814) stk17a (ENSXETG00000015813) ENSXETG00000042080 hecw1 (ENSXETG00000015806) mrpl32 (ENSXETG00000001852) psma2 (ENSXETG00000001853) c7orf25 (ENSXETG00000001855) gli3 (ENSXETG00000001856) #22 inhba (ENSXETG00000001861) #23 sugct (ENSXETG00000015599) #24 ENSXETG00000045214 glb1l (ENSXETG00000015609) mplkip (ENSXETG00000048813) #25 rhagl (ENSXETG00000015612) ENSXETG00000036520 ccr2 (ENSXETG00000038447) slc6a19 (ENSXETG00000015619) tert (ENSXETG00000015624) clptm1l (ENSXETG00000015645) pkd1l1 (ENSXETG00000032537) tns3 (ENSXETG00000015646) igfbp1 (ENSXETG00000015656) adcy1 (ENSXETG00000015663) Frog MODERN SPECIES 9 ENSXETG00000046113 cd63l (ENSXETG00000049343) ENSXETG00000043344 ENSXETG00000041057 ADCY5 (ENSXETG00000024163) iqcb1 (ENSXETG00000013923) eaf2 (ENSXETG00000000002) slc15a2 (ENSXETG00000012024) hspbap1 (ENSXETG00000012023) slc49a4 (ENSXETG00000012022) sema5b (ENSXETG00000012021) pdia5 (ENSXETG00000043385) sec22a (ENSXETG00000018026) inhbb (ENSXETG00000044060) ralb (ENSXETG00000046106) gli2 (ENSXETG00000011189) #22 TFCP2L1 (ENSXETG00000043767) clasp1 (ENSXETG00000043032) nifk (ENSXETG00000000839) ENSXETG00000044754 tsn (ENSXETG00000044286) ENSXETG00000048188 st8sia1 (ENSXETG00000046896) umps (ENSXETG00000048614) itgb5 (ENSXETG00000047570) ENSXETG00000045981 ENSXETG00000042186 slc12a8 (ENSXETG00000039527) znf148 (ENSXETG00000023383) SNX4 (ENSXETG00000048944) ENSXETG00000043556 Coelacanth MODERN SPECIES 982 MRPL32 (ENSLACG00000013631) PSMA2 (ENSLACG00000013454) C7orf25 (ENSLACG00000013325) ENSLACG00000010564 GLI3 (ENSLACG00000003758) #22 Actinopterygii ANCESTRAL SPECIES 251 ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000011176 #29 ENSGT00940000156175 #30 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.a ENSGT00940000153143.a.b.b ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 Reedfish MODERN SPECIES 14 RPP40 (ENSECRG00000002392) ENSECRG00000002424 LYRM4 (ENSECRG00000002454) fars2 (ENSECRG00000002463) nrn1a (ENSECRG00000002479) f13a1b (ENSECRG00000002498) RREB1 (ENSECRG00000002539) ssr1 (ENSECRG00000002570) riok1 (ENSECRG00000002592) DSP (ENSECRG00000002661) TNS3 (ENSECRG00000002744) igfbp3 (ENSECRG00000002820) igfbp1a (ENSECRG00000002826) adcy1b (ENSECRG00000002837) ENSECRG00000002857 gli3 (ENSECRG00000002867) #22 ENSECRG00000002880 inhbab (ENSECRG00000002889) #23 sugct (ENSECRG00000002898) #24 mplkip (ENSECRG00000002911) #25 ENSECRG00000002922 #26 ralab (ENSECRG00000002936) #28 ENSECRG00000002949 #30 ENSECRG00000002960 #30 ENSECRG00000002974 vps41 (ENSECRG00000003103) amph (ENSECRG00000003738) ENSECRG00000003755 serpinb1 (ENSECRG00000003764) wrnip1 (ENSECRG00000003772) MYLK4 (ENSECRG00000003781) Neopterygii ANCESTRAL SPECIES 220 ENSGT00390000000626 ENSGT00940000159820 ENSGT00390000000805 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367 ENSGT01030000234667.a.a.b ENSGT00940000155925 #22 ENSGT00940000157116 #23 ENSGT00940000157866 #24 ENSGT00390000002582 #25 ENSGT00940000157852 #26 ENSGT00940000155142 #28 ENSGT00660000095569.c ENSGT00390000014722 ENSGT00940000158009.b Spotted gar MODERN SPECIES 675 eci2 (ENSLOCG00000012125) CIDEA (ENSLOCG00000012116) tubb6 (ENSLOCG00000012112) afg3l2 (ENSLOCG00000012103) dipk1c (ENSLOCG00000012097) ENSLOCG00000012092 cyb5a (ENSLOCG00000012082) TMEM108 (ENSLOCG00000012078) bfsp2 (ENSLOCG00000012071) cdv3 (ENSLOCG00000012062) topbp1 (ENSLOCG00000012044) DNAJC13 (ENSLOCG00000012015) lztfl1 (ENSLOCG00000012008) zgc:136930 (ENSLOCG00000012001) ccr9a (ENSLOCG00000011998) gli3 (ENSLOCG00000011983) #22 inhbab (ENSLOCG00000011979) #23 sugct (ENSLOCG00000011972) #24 mplkip (ENSLOCG00000011967) #25 CDK13 (ENSLOCG00000011954) #26 ralab (ENSLOCG00000011940) #28 zgc:111976 (ENSLOCG00000011924) zgc:55781 (ENSLOCG00000011919) fbxl7 (ENSLOCG00000011912) ENSLOCG00000018135 chmp4c (ENSLOCG00000011903) zfand1 (ENSLOCG00000011892) ENSLOCG00000011886 si:dkey-29d8.3 (ENSLOCG00000011881) ENSLOCG00000011864 msrb2 (ENSLOCG00000011855) Osteoglossocephalai ANCESTRAL SPECIES 58 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367 ENSGT01030000234667.a.a.b.e ENSGT00940000159862.a ENSGT00940000155925 #22 ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.c.lb.a ENSGT01100000263502.B.a.a.c ENSGT00930000151022.b ENSGT00390000006522.a.b ENSGT00940000157031.l ENSGT00530000064112.a ENSGT00940000154634.d.b ENSGT00940000154634.c.lb.b Osteoglossiformes DUPLICATION Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 77 ENSGT00940000156325 ENSGT00940000158945.m ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000165754.a ENSGT00400000024709.a ENSGT00940000155594.c.b ENSGT00940000154025.a.f ENSGT00940000158533 ENSGT00390000000805.lb ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582.e ENSGT00390000016415.b ENSGT01030000234667.a.a.b.e ENSGT00940000155925.a.a #22 ENSGT00390000009209.t ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.c.lb.a ENSGT00660000095569.c ENSGT00940000157852.e #26 ENSGT00940000157866 #24 ENSGT00940000157116.f #23 ENSGT00940000155105 ENSGT00390000018596.A.b.i ENSGT00940000159977 ENSGT00390000006452.a.l ENSGT00940000169201 Asian bonytongue MODERN SPECIES 20 abcf2b (ENSSFOG00015019373) ENSSFOG00015019423 slc4a2b (ENSSFOG00015019490) ubtfl (ENSSFOG00015019524) ENSSFOG00015032739 NRBP2 (ENSSFOG00015019564) puf60b (ENSSFOG00015019371) scrib (ENSSFOG00015019872) KIF9 (ENSSFOG00015019977) topbp1 (ENSSFOG00015020018) ENSSFOG00015020047 DNAJC13 (ENSSFOG00015020079) lztfl1 (ENSSFOG00015020167) ENSSFOG00015020188 CCR9 (ENSSFOG00015020182) gli3 (ENSSFOG00015026553) #22 PXDC1 (ENSSFOG00015020261) TMX3 (ENSSFOG00015029330) DSEL (ENSSFOG00015020294) ENSSFOG00015020298 CDH7 (ENSSFOG00015020309) IMPA1 (ENSSFOG00015020355) zgc:111976 (ENSSFOG00015020371) RALA (ENSSFOG00015029643) #28 CDK13 (ENSSFOG00015026289) #26 sugct (ENSSFOG00015020428) #24 inhbaa (ENSSFOG00015027642) #23 eci2 (ENSSFOG00015020474) ENSSFOG00015020489 ENSSFOG00015020137 DIPK1C (ENSSFOG00015020513) P. kingsleyae MODERN SPECIES 62 lztfl1 (ENSPKIG00000009710) CCR9 (ENSPKIG00000009754) gli3 (ENSPKIG00000009769) #22 PXDC1 (ENSPKIG00000009812) TMX3 (ENSPKIG00000009848) DSEL (ENSPKIG00000009892) ENSPKIG00000009909 CDH7 (ENSPKIG00000009942) ENSPKIG00000009976 IMPA1 (ENSPKIG00000010002) fbxl7 (ENSPKIG00000010043) ENSPKIG00000010091 CDK13 (ENSPKIG00000010187) #26 sugct (ENSPKIG00000010227) #24 inhbaa (ENSPKIG00000010263) #23 eci2 (ENSPKIG00000010287) ENSPKIG00000010331 tubb6 (ENSPKIG00000010354) Osteoglossiformes ANCESTRAL SPECIES 143 ENSGT00940000158259.a ENSGT00940000165754.b ENSGT01030000234607.A.a.a.b ENSGT00400000024709.b ENSGT00940000160430 ENSGT00940000155594.c.a ENSGT00940000154025.a.e ENSGT00940000157026 ENSGT00390000000805.kb ENSGT00940000159820 ENSGT00940000167546 ENSGT00390000017582.f ENSGT00390000016415.a ENSGT00930000151367 ENSGT01030000234667.a.a.b.f ENSGT00940000155925.a.b #22 ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209.s ENSGT01100000263502.B.a.a.c ENSGT00930000151022.b ENSGT00390000006522.a.b ENSGT00940000157031.l ENSGT00530000064112.a ENSGT00940000154634.d.b ENSGT00940000154634.c.lb.b ENSGT00940000158009.b ENSGT00390000014722 ENSGT00940000155142 #28 ENSGT00940000157852.f #26 ENSGT00390000002582 #25 Asian bonytongue MODERN SPECIES 22 slc4a2a (ENSSFOG00015019548) ubtfl (ENSSFOG00015019492) fastk (ENSSFOG00015019472) ENSSFOG00015019469 NRBP2 (ENSSFOG00015019418) puf60a (ENSSFOG00015019619) SCRIB (ENSSFOG00015019152) klhl18 (ENSSFOG00015019082) cdv3 (ENSSFOG00015019063) bfsp2 (ENSSFOG00015019046) ENSSFOG00015019026 DNAJC13 (ENSSFOG00015018764) LZTFL1 (ENSSFOG00015018697) zgc:136930 (ENSSFOG00015018665) ccr9a (ENSSFOG00015018658) gli3 (ENSSFOG00015018628) #22 prpf4bb (ENSSFOG00015018473) ENSSFOG00015018456 PXDC1 (ENSSFOG00015018445) opn4.1 (ENSSFOG00015018440) tmx3a (ENSSFOG00015018423) ENSSFOG00015018413 DSEL (ENSSFOG00015018404) cdh7a (ENSSFOG00015018193) ENSSFOG00015018142 impa1 (ENSSFOG00015024921) IMPA1 (ENSSFOG00015018091) fbxl7 (ENSSFOG00015033203) ENSSFOG00015017978 zgc:55781 (ENSSFOG00015032650) ralab (ENSSFOG00015032676) #28 Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000155925.b #22 P. kingsleyae MODERN SPECIES 228 MRAS (ENSPKIG00000019227) tmem177 (ENSPKIG00000019251) ENSPKIG00000019332 epb41l5 (ENSPKIG00000019539) RALB (ENSPKIG00000019627) ENSPKIG00000019644 inhbb (ENSPKIG00000019656) ENSPKIG00000019668 ENSPKIG00000019696 ENSPKIG00000019749 #22 ENSPKIG00000019853 tfcp2l1 (ENSPKIG00000019892) CLASP1 (ENSPKIG00000019951) nifk (ENSPKIG00000020011) si:dkey-91i10.2 (ENSPKIG00000020047) slc15a2 (ENSPKIG00000020077) cyp27a3 (ENSPKIG00000020118) eaf2 (ENSPKIG00000020151) hspbap1 (ENSPKIG00000020178) SEMA5B (ENSPKIG00000020210) pdia5 (ENSPKIG00000020279) sec22a (ENSPKIG00000020337) adcy5 (ENSPKIG00000020403) hacd2 (ENSPKIG00000020517) stam2 (ENSPKIG00000020570) Clupeocephala ANCESTRAL SPECIES 150 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00390000002582 #25 ENSGT00940000157116.e #23 Otomorpha ANCESTRAL SPECIES 349 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00390000002582 #25 ENSGT00940000157116.e #23 Otophysi ANCESTRAL SPECIES 131 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT01100000263502.B.a.a.c ENSGT00390000000715 ENSGT00390000016573.c.b ENSGT00940000163957.e.a ENSGT00940000157263 ENSGT00390000011926 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00940000166881 ENSGT00940000159901 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 97 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925.c #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT01100000263502.B.a.a.c ENSGT00390000000715 ENSGT00390000016573.c.b ENSGT00940000163957.e.a ENSGT00940000157263 ENSGT00390000011926 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00940000166881 ENSGT00940000159901 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 867 ENSGT00390000016415.g.b ENSGT01030000234667.a.a.b.e ENSGT00940000155925.c.a #22 ENSGT00940000155562.l.b.b ENSGT00390000009209.o.b ENSGT01030000234667.a.a.a.b.a.c ENSGT00940000160993.f Cyprininae_a ANCESTRAL SPECIES 589 ENSGT00390000016415.g.b ENSGT01030000234667.a.a.b.e.g ENSGT00940000155925.c.a #22 ENSGT00940000155562.l.b.b ENSGT00390000009209.o.b ENSGT01030000234667.a.a.a.b.a.c ENSGT00940000160993.f ENSGT00960000193148 ENSGT00940000159257.c ENSGT00940000162556.B.b Common carp reference MODERN SPECIES 14 ENSCCRG00000068714 slc35b3 (ENSCCRG00000032682) ENSCCRG00000069838 ENSCCRG00000072299 tfap2a (ENSCCRG00000031436) tmem14ca (ENSCCRG00000057248) mak (ENSCCRG00000025272) gcm2 (ENSCCRG00000061077) ENSCCRG00000013949 elovl2 (ENSCCRG00000013960) ENSCCRG00000069055 gnal (ENSCCRG00000061470) ENSCCRG00000079315 ENSCCRG00000014915 ENSCCRG00000015054 gli3 (ENSCCRG00000036325) #22 ENSCCRG00000080858 ENSCCRG00000071951 prpf4bb (ENSCCRG00000005184) ENSCCRG00000079991 ENSCCRG00000074896 ackr4b (ENSCCRG00000023808) ENSCCRG00000081099 ENSCCRG00000040058 ENSCCRG00000038392 chmp4c (ENSCCRG00000071920) ENSCCRG00000017196 ENSCCRG00000079554 ASAP1 (ENSCCRG00000027846) eef1a1l3 (ENSCCRG00000015970) fam49bb (ENSCCRG00000005112) Golden-line barbel MODERN SPECIES 246 ENSSGRG00000009696 CCR9 (ENSSGRG00000009695) gli3 (ENSSGRG00000009694) #22 prpf4bb (ENSSGRG00000009242) PXDC1 (ENSSGRG00000009239) ackr4b (ENSSGRG00000009238) ENSSGRG00000009237 myripb (ENSSGRG00000009233) ENSSGRG00000009231 ENSSGRG00000009230 chmp4c (ENSSGRG00000009229) ENSSGRG00000009228 ENSSGRG00000009227 Cyprininae ANCESTRAL SPECIES 156 ENSGT00940000155925.c.b #22 ENSGT00940000155562.l.b.a ENSGT00390000009209.o.a ENSGT00940000160993.e ENSGT01030000234667.a.a.a.b.a.d ENSGT00950000183138.a.a.b.u ENSGT00390000005489.e ENSGT00730000111180.k ENSGT00940000159257.d ENSGT00940000162556.B.a.b ENSGT00940000158547.c.a ENSGT00940000165526.b ENSGT00390000015159.b.a.a.a ENSGT00940000155285.b.j.a.b.a ENSGT00390000012189.c.b.d ENSGT00390000009802.b.e.a Cyprininae_a ANCESTRAL SPECIES 499 ENSGT00390000016415.g.a.b ENSGT01030000234667.a.a.b.e.h ENSGT00940000159213.r ENSGT00940000155925.c.b #22 ENSGT00940000155562.l.b.a ENSGT00390000009209.o.a ENSGT00940000160993.e ENSGT01030000234667.a.a.a.b.a.d ENSGT00950000183138.a.a.b.u ENSGT00390000005489.e ENSGT00730000111180.k ENSGT00940000162556.B.a.a ENSGT00940000158547.c.a ENSGT00940000165526.b ENSGT00390000015159.b.a.a.a Golden-line barbel MODERN SPECIES 510 gli3 (ENSSGRG00000047734) #22 prpf4bb (ENSSGRG00000047743) PXDC1 (ENSSGRG00000047751) acad11 (ENSSGRG00000047770) ackr4b (ENSSGRG00000048061) myripb (ENSSGRG00000048066) ENSSGRG00000048069 zfand1 (ENSSGRG00000048070) chmp4c (ENSSGRG00000048073) ASAP1 (ENSSGRG00000048129) eef1a1l3 (ENSSGRG00000049763) ENSSGRG00000049764 Goldfish MODERN SPECIES 16 ENSCARG00000052116 ENSCARG00000052161 ENSCARG00000052518 nphp3 (ENSCARG00000052550) uba5 (ENSCARG00000052644) topbp1 (ENSCARG00000053303) ENSCARG00000053840 cdv3 (ENSCARG00000053848) vps41 (ENSCARG00000054045) POU6F2 (ENSCARG00000056161) #30 otulina (ENSCARG00000056241) #29 ENSCARG00000056263 ankha (ENSCARG00000056356) myc (ENSCARG00000056880) ENSCARG00000056898 gli3 (ENSCARG00000056913) #22 ENSCARG00000056931 ENSCARG00000056937 prpf4bb (ENSCARG00000056977) PXDC1 (ENSCARG00000057584) acad11 (ENSCARG00000057621) ackr4b (ENSCARG00000057837) myripb (ENSCARG00000057876) ENSCARG00000057916 ENSCARG00000057924 zfand1 (ENSCARG00000057943) chmp4c (ENSCARG00000057987) ENSCARG00000058011 ASAP1 (ENSCARG00000058303) eef1a1l3 (ENSCARG00000062733) fam49bb (ENSCARG00000062779) Zebrafish MODERN SPECIES 16 psme1 (ENSDARG00000002165) pck2 (ENSDARG00000020956) ENSDARG00000041828 nanog (ENSDARG00000075113) ENSDARG00000041493 cox19 (ENSDARG00000063882) ENSDARG00000096451 si:ch211-196f5.2 (ENSDARG00000041492) rec8b (ENSDARG00000069260) pdcd6 (ENSDARG00000005220) ENSDARG00000110005 lztfl1 (ENSDARG00000105010) CCR9 (ENSDARG00000099738) fen1 (ENSDARG00000011404) tm9sf1 (ENSDARG00000022970) gli3 (ENSDARG00000052131) #22 prpf4bb (ENSDARG00000040310) PXDC1 (ENSDARG00000040309) ackr4b (ENSDARG00000040133) acad11 (ENSDARG00000045411) ENSDARG00000094422 myripb (ENSDARG00000038814) ENSDARG00000071735 zfand1 (ENSDARG00000009178) chmp4c (ENSDARG00000007418) ENSDARG00000090548 eef1a1l3 (ENSDARG00000071727) ASAP1 (ENSDARG00000039729) fam49bb (ENSDARG00000045417) myca (ENSDARG00000045695) ENSDARG00000098036 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155925.d #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155925.d #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155925.d #22 Golden-line barbel MODERN SPECIES 1821 ENSSGRG00000022261 #22 Characiphysae ANCESTRAL SPECIES 191 ENSGT00930000151022.a.e ENSGT00390000017582 ENSGT00390000016415 ENSGT00970000198170 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT01100000263502.B.a.a.c ENSGT00390000000715 ENSGT00390000016573.c.b ENSGT00940000163957.e.a ENSGT00940000157263 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 15 pou6f2 (ENSIPUG00000004301) #30 yae1d1 (ENSIPUG00000004288) #29 ENSIPUG00000004235 ankhb (ENSIPUG00000004183) myca (ENSIPUG00000004157) FAM49B (ENSIPUG00000004088) eef1a1l3 (ENSIPUG00000004067) ENSIPUG00000004056 ENSIPUG00000004039 ENSIPUG00000004012 DNAJC13 (ENSIPUG00000003911) tmx3 (ENSIPUG00000003866) lztfl1 (ENSIPUG00000003801) ENSIPUG00000003784 CCR9 (ENSIPUG00000003778) gli3 (ENSIPUG00000003729) #22 prpf4b (ENSIPUG00000003706) pxdc1b (ENSIPUG00000003673) ackr4b (ENSIPUG00000003662) ACAD11 (ENSIPUG00000003475) myrip (ENSIPUG00000003419) prlh (ENSIPUG00000003406) zfand1 (ENSIPUG00000003356) chmp4c (ENSIPUG00000003309) ENSIPUG00000003301 ENSIPUG00000003280 Channel catfish MODERN SPECIES 1 DKK3 (ENSIPUG00000020683) mical2 (ENSIPUG00000020704) parvab (ENSIPUG00000020809) tead1 (ENSIPUG00000020844) RASSF10 (ENSIPUG00000020889) ARNTL (ENSIPUG00000020900) Btbd10 (ENSIPUG00000020966) pth1b (ENSIPUG00000020983) ZNF710 (ENSIPUG00000020988) Tmed3 (ENSIPUG00000020992) frmd5 (ENSIPUG00000020998) serf2a (ENSIPUG00000021021) ENSIPUG00000021055 RAL (ENSIPUG00000021072) INHBB (ENSIPUG00000021079) ENSIPUG00000021082 #22 CLASP1 (ENSIPUG00000021100) ENSIPUG00000021188 ENSIPUG00000021193 ENSIPUG00000021196 CLCN4 (ENSIPUG00000021203) ENSIPUG00000021260 CLDN33a (ENSIPUG00000021266) ENSIPUG00000021270 SHROOM2 (ENSIPUG00000021273) gnb4b (ENSIPUG00000021291) mfn1b (ENSIPUG00000021322) trappc10 (ENSIPUG00000021347) ENSIPUG00000021381 MAFG (ENSIPUG00000021402) pycr1 (ENSIPUG00000021406) Characiphysae_b ANCESTRAL SPECIES 196 ENSGT00930000151022.a.e ENSGT00390000017582 ENSGT00390000016415 ENSGT00970000198170 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT01100000263502.B.a.a.c ENSGT00390000000715 ENSGT00390000016573.c.b ENSGT00940000163957.e.a ENSGT00940000157263 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 Electric eel MODERN SPECIES 77 ENSEEEG00000009043 DNAJC13 (ENSEEEG00000008133) lztfl1 (ENSEEEG00000008058) ENSEEEG00000008057 ENSEEEG00000008055 gli3 (ENSEEEG00000008052) #22 prpf4bb (ENSEEEG00000008050) PXDC1 (ENSEEEG00000008047) ackr4b (ENSEEEG00000008046) acad11 (ENSEEEG00000007856) myripb (ENSEEEG00000007847) ENSEEEG00000007845 ENSEEEG00000007844 zfand1 (ENSEEEG00000007840) chmp4c (ENSEEEG00000007837) ENSEEEG00000007835 ASAP1 (ENSEEEG00000007832) eef1a1l3 (ENSEEEG00000007828) fam49bb (ENSEEEG00000007589) myca (ENSEEEG00000007584) ankha (ENSEEEG00000007582) Characoidei ANCESTRAL SPECIES 249 ENSGT00930000151022.a.e ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000159213.r ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT01100000263502.B.a.a.c ENSGT00390000000715 ENSGT00390000016573.c.b ENSGT00940000163957.e.a ENSGT00940000157263 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 Mexicana tetra MODERN SPECIES 18 gjd2b (ENSAMXG00000031889) stxbp6l (ENSAMXG00000009419) ddhd1b (ENSAMXG00000009383) cgrrf1 (ENSAMXG00000036911) psmc6 (ENSAMXG00000034638) ptger2b (ENSAMXG00000009338) ENSAMXG00000009305 zfp36l1b (ENSAMXG00000029887) ENSAMXG00000039632 DSEL (ENSAMXG00000025768) ENSAMXG00000042730 DNAJC13 (ENSAMXG00000002451) lztfl1 (ENSAMXG00000002469) ENSAMXG00000029732 ENSAMXG00000002471 gli3 (ENSAMXG00000002477) #22 RNGTT (ENSAMXG00000031342) pnrc1 (ENSAMXG00000036943) PM20D2 (ENSAMXG00000010643) gabrr1 (ENSAMXG00000041337) GABRR2 (ENSAMXG00000035921) ube2j1 (ENSAMXG00000039648) ankrd6b (ENSAMXG00000010628) lyrm2 (ENSAMXG00000034149) lats1 (ENSAMXG00000010621) nup43 (ENSAMXG00000036352) pcmt (ENSAMXG00000036038) lrp11 (ENSAMXG00000007077) map3k5 (ENSAMXG00000007103) ccn2a (ENSAMXG00000034053) moxd1 (ENSAMXG00000038028) Red-bellied piranha MODERN SPECIES 629 ENSPNAG00000014512 #22 CLASP1 (ENSPNAG00000014488) Clupeiformes ANCESTRAL SPECIES 567 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00390000012596.f ENSGT00530000063835.b ENSGT00940000157762 Denticle herring MODERN SPECIES 11 smarcd3b (ENSDCDG00000001387) CHPF2 (ENSDCDG00000001373) abcf2b (ENSDCDG00000001365) PRKDC (ENSDCDG00000001097) garem (ENSDCDG00000001044) ncf2 (ENSDCDG00000000975) dph2 (ENSDCDG00000000956) zgc:165532 (ENSDCDG00000000950) rgs9bp (ENSDCDG00000000948) ENSDCDG00000000942 ENSDCDG00000000938 scrib (ENSDCDG00000000703) lztfl1 (ENSDCDG00000000560) ENSDCDG00000000556 ENSDCDG00000000553 gli3 (ENSDCDG00000000548) #22 AGL (ENSDCDG00000000518) rbbp8 (ENSDCDG00000000497) ENSDCDG00000000487 mix23 (ENSDCDG00000000483) fam162a (ENSDCDG00000000474) KPNA1 (ENSDCDG00000000410) ENSDCDG00000000313 drd3 (ENSDCDG00000000306) qtrt2 (ENSDCDG00000000286) ccdc191 (ENSDCDG00000000272) zdhhc23b (ENSDCDG00000000259) GRAMD1C (ENSDCDG00000000240) atp6v1aa (ENSDCDG00000000223) naa50 (ENSDCDG00000000198) USF3 (ENSDCDG00000000162) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 8 ccdc153 (ENSCHAG00000011652) ENSCHAG00000011643 GRIK4 (ENSCHAG00000011273) ENSCHAG00000011247 ENSCHAG00000011236 DNAJC13 (ENSCHAG00000011130) ENSCHAG00000011089 ENSCHAG00000011074 ENSCHAG00000011058 ENSCHAG00000009756 ENSCHAG00000009491 ENSCHAG00000008279 ENSCHAG00000008041 ENSCHAG00000008019 ENSCHAG00000008014 gli3 (ENSCHAG00000007956) #22 AGL (ENSCHAG00000003286) ENSCHAG00000002823 ENSCHAG00000002393 ENSCHAG00000022610 ENSCHAG00000022605 ENSCHAG00000022587 CABLES1 (ENSCHAG00000022563) ENSCHAG00000022550 riok3 (ENSCHAG00000021832) ENSCHAG00000021773 EIF1B (ENSCHAG00000021761) neurod6a (ENSCHAG00000021758) ENSCHAG00000021745 ENSCHAG00000021730 PDE1C (ENSCHAG00000021426) Atlantic herring MODERN SPECIES 13 mmadhca (ENSCHAG00000004464) rnd3a (ENSCHAG00000004399) ENSCHAG00000004364 ENSCHAG00000004095 GOLT1B (ENSCHAG00000004077) ENSCHAG00000002722 ccnt2b (ENSCHAG00000002533) ENSCHAG00000002437 mgat5 (ENSCHAG00000025244) PTH2R (ENSCHAG00000025146) ptpn4b (ENSCHAG00000025109) ENSCHAG00000025098 ENSCHAG00000025093 RALB (ENSCHAG00000025088) INHBB (ENSCHAG00000025084) ENSCHAG00000025058 #22 CLASP1 (ENSCHAG00000024328) ENSCHAG00000024285 clcn4 (ENSCHAG00000023965) ENSCHAG00000023954 ENSCHAG00000023949 ENSCHAG00000023945 ENSCHAG00000023942 ENSCHAG00000023923 stat1a (ENSCHAG00000023851) glsa (ENSCHAG00000023091) nab1a (ENSCHAG00000023054) mfsd6a (ENSCHAG00000023051) INPP1 (ENSCHAG00000023048) ENSCHAG00000023043 ahr2 (ENSCHAG00000022994) Atlantic herring MODERN SPECIES 11 tsn (ENSCHAG00000000137) ENSCHAG00000000161 nifk (ENSCHAG00000000181) ENSCHAG00000000202 nifk (ENSCHAG00000000229) ENSCHAG00000000283 ENSCHAG00000000290 ENSCHAG00000000294 ENSCHAG00000000322 ENSCHAG00000000337 ENSCHAG00000000366 ENSCHAG00000002001 ENSCHAG00000017628 ENSCHAG00000017704 inhbb (ENSCHAG00000017712) ENSCHAG00000017733 #22 ENSCHAG00000017746 ENSCHAG00000017769 ENSCHAG00000017950 tfcp2l1 (ENSCHAG00000017978) clasp1a (ENSCHAG00000018184) ENSCHAG00000020700 ENSCHAG00000020721 ENSCHAG00000020744 ENSCHAG00000020732 ENSCHAG00000020765 ENSCHAG00000020871 mab21l3 (ENSCHAG00000023802) dnajc28 (ENSCHAG00000023810) ENSCHAG00000023812 rcan1a (ENSCHAG00000023817) Euteleosteomorpha ANCESTRAL SPECIES 31 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Protacanthopterygii ANCESTRAL SPECIES 49 ENSGT00940000165526 ENSGT00940000158547.c.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Northern pike MODERN SPECIES 20 scrib (ENSELUG00000009059) KIF9 (ENSELUG00000008912) ENSELUG00000032392 cdv3 (ENSELUG00000008485) ENSELUG00000008474 topbp1 (ENSELUG00000008446) DNAJC13 (ENSELUG00000008383) ENSELUG00000034161 ENSELUG00000029367 ENSELUG00000005312 ENSELUG00000028668 ENSELUG00000031791 lztfl1 (ENSELUG00000005297) ENSELUG00000005275 CCR9 (ENSELUG00000005254) gli3 (ENSELUG00000005226) #22 ENSELUG00000032420 ENSELUG00000027014 prpf4bb (ENSELUG00000005167) PXDC1 (ENSELUG00000025131) TMX3 (ENSELUG00000005107) DSEL (ENSELUG00000005084) ENSELUG00000008883 CDH7 (ENSELUG00000008843) IMPA1 (ENSELUG00000001369) ENSELUG00000034504 ENSELUG00000030081 ENSELUG00000033743 ENSELUG00000008975 zgc:111976 (ENSELUG00000008926) ralaa (ENSELUG00000028478) #28 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 87 ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g ENSGT00940000158533 ENSGT00390000000805.gb ENSGT00390000000626.f ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00940000178827 ENSGT00940000157001.e ENSGT00390000017582.g ENSGT00940000162064.m.a.a.b ENSGT00390000016415.c ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e.c ENSGT00940000155925.j.a.a #22 ENSGT00940000155562.l.b.c.b.a ENSGT00390000009209.g.b ENSGT00940000155562.l.b.c.b.b ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a.i ENSGT00940000166818 ENSGT00940000157031.k.c ENSGT00940000154634.d.a ENSGT00940000154648.a.a.o.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.f ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g ENSGT00940000158533 ENSGT00390000000805.gb ENSGT00390000000626.f ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00940000178827 ENSGT00940000157001.e ENSGT00390000017582.g ENSGT00940000162064.m.a.a.b ENSGT00390000016415.c ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e.c ENSGT00940000155925.j.a.a #22 ENSGT00940000155562.l.b.c.b.a ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a.i ENSGT00940000166818 ENSGT00940000157031.k.c ENSGT00940000154634.d.a ENSGT00940000154648.a.a.o.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.f ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852.a.a #26 Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00400000024709.l ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g ENSGT00940000158533 ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00390000000805.gb ENSGT00390000000626.f ENSGT00940000157001.e ENSGT00390000017582.g ENSGT00940000162064.m.a.a.b ENSGT00390000016415.c ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e.c ENSGT00940000155925.j.a.a #22 ENSGT00940000155562.l.b.c.b.a ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a.i ENSGT00940000166818 ENSGT00940000157031.k.c ENSGT00940000154634.d.a ENSGT00940000154648.a.a.o.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.f ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852.a.a #26 Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g ENSGT00940000158533 ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.a.b ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00390000000805.gb ENSGT00390000000626.f ENSGT00940000157001.e ENSGT00390000017582.g ENSGT00940000162064.m.a.a.b ENSGT00390000016415.c ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e.c ENSGT00940000155925.j.a.a #22 ENSGT00940000155562.l.b.c.b.a ENSGT00390000009209.g.b ENSGT00940000155562.l.b.c.b.b ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a.i ENSGT00940000166818 ENSGT00940000157031.k.c ENSGT00940000154634.d.a ENSGT00940000154648.a.a.o.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.f ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c Chinook salmon DUPLICATION Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 21 ENSOTSG00005009494 nrbp2b (ENSOTSG00005009489) puf60b (ENSOTSG00005008450) scrib (ENSOTSG00005008443) KIF9 (ENSOTSG00005008233) ENSOTSG00005008225 ENSOTSG00005008223 ENSOTSG00005008222 ENSOTSG00005008221 topbp1 (ENSOTSG00005008141) DNAJC13 (ENSOTSG00005008133) ENSOTSG00005008132 lztfl1 (ENSOTSG00005008131) ENSOTSG00005008129 CCR9 (ENSOTSG00005008128) gli3 (ENSOTSG00005008126) #22 prpf4bb (ENSOTSG00005006584) PXDC1 (ENSOTSG00005006576) TMX3 (ENSOTSG00005005001) ENSOTSG00005004978 ENSOTSG00005004976 CDH7 (ENSOTSG00005003463) ENSOTSG00005003458 ENSOTSG00005003456 ENSOTSG00005003455 ENSOTSG00005003454 ENSOTSG00005003451 ENSOTSG00005003447 zgc:111976 (ENSOTSG00005003444) ralaa (ENSOTSG00005003441) #28 ENSOTSG00005003437 #26 Chinook salmon MODERN SPECIES 2903 ENSOTSG00005030593 zgc:193812 (ENSOTSG00005030591) nedd1 (ENSOTSG00005030590) ETFRF1 (ENSOTSG00005030587) si:ch211-59o9.10 (ENSOTSG00005030584) arl1 (ENSOTSG00005030582) ENSOTSG00005030581 ENSOTSG00005030580 ENSOTSG00005030578 ENSOTSG00005030577 RHCG (ENSOTSG00005030270) POLG (ENSOTSG00005030004) FBXO31 (ENSOTSG00005029975) banp (ENSOTSG00005029973) CCR9 (ENSOTSG00005029972) gli3 (ENSOTSG00005029970) #22 prpf4bb (ENSOTSG00005029206) PXDC1 (ENSOTSG00005029196) TMX3 (ENSOTSG00005027815) ENSOTSG00005027809 ENSOTSG00005027808 CDH7 (ENSOTSG00005027315) ENSOTSG00005027308 ENSOTSG00005027306 ENSOTSG00005027305 ENSOTSG00005027304 ENSOTSG00005027303 ENSOTSG00005027301 zgc:111976 (ENSOTSG00005027300) ENSOTSG00005027298 #26 ENSOTSG00005027295 Chinook salmon MODERN SPECIES 2903 ENSOTSG00005029491 ccr6a (ENSOTSG00005029493) cep43 (ENSOTSG00005029496) myt1la (ENSOTSG00005029508) rnaseh1 (ENSOTSG00005029509) rps7 (ENSOTSG00005029512) allc (ENSOTSG00005029517) flrt2 (ENSOTSG00005029529) ENSOTSG00005029530 glrx5 (ENSOTSG00005029532) ints9 (ENSOTSG00005029535) pla2g7 (ENSOTSG00005029759) sf3b6 (ENSOTSG00005029822) vsnl1a (ENSOTSG00005029825) CCR9 (ENSOTSG00005029827) gli3 (ENSOTSG00005029832) #22 prpf4bb (ENSOTSG00005029874) PXDC1 (ENSOTSG00005030293) TMX3 (ENSOTSG00005022179) DSEL (ENSOTSG00005023158) ENSOTSG00005023159 CDH7 (ENSOTSG00005023160) ENSOTSG00005023165 ENSOTSG00005023166 ENSOTSG00005023167 ENSOTSG00005023168 ENSOTSG00005023169 ENSOTSG00005023170 zgc:111976 (ENSOTSG00005023171) ralaa (ENSOTSG00005023172) #28 ENSOTSG00005023174 #26 Coho salmon MODERN SPECIES 2 ENSOKIG00005001978 ENSOKIG00005001983 nrbp2b (ENSOKIG00005002054) puf60b (ENSOKIG00005002382) scrib (ENSOKIG00005003041) KIF9 (ENSOKIG00005003313) ENSOKIG00005003334 ENSOKIG00005003339 cdv3 (ENSOKIG00005003342) ENSOKIG00005003351 topbp1 (ENSOKIG00005003386) DNAJC13 (ENSOKIG00005003460) LZTFL1 (ENSOKIG00005003574) ENSOKIG00005003601 ENSOKIG00005003608 gli3 (ENSOKIG00005003639) #22 PRPF4B (ENSOKIG00005003699) TMX3 (ENSOKIG00005004211) DSEL (ENSOKIG00005004376) ENSOKIG00005004389 CDH7 (ENSOKIG00005004515) ENSOKIG00005005089 ENSOKIG00005005117 ENSOKIG00005005176 ENSOKIG00005005193 ENSOKIG00005005213 ENSOKIG00005005237 ralaa (ENSOKIG00005005278) #28 ENSOKIG00005005297 #26 ENSOKIG00005005316 ENSOKIG00005005328 Rainbow trout MODERN SPECIES 6 ENSOMYG00000014121 ENSOMYG00000051286 nrbp2b (ENSOMYG00000014017) ENSOMYG00000013710 SCRIB (ENSOMYG00000013552) ENSOMYG00000013386 ENSOMYG00000013331 ENSOMYG00000013325 cdv3 (ENSOMYG00000013321) ENSOMYG00000013303 topbp1 (ENSOMYG00000013261) ENSOMYG00000013078 ENSOMYG00000012970 ENSOMYG00000012957 ENSOMYG00000012931 ENSOMYG00000012897 #22 ENSOMYG00000011817 ENSOMYG00000057533 TMX3 (ENSOMYG00000010402) ENSOMYG00000009961 ENSOMYG00000009932 CDH7 (ENSOMYG00000009820) ENSOMYG00000009749 ENSOMYG00000009710 ENSOMYG00000051469 ENSOMYG00000059118 ENSOMYG00000048103 ENSOMYG00000009661 ENSOMYG00000076263 ENSOMYG00000009608 zgc:111976 (ENSOMYG00000009551) Salmo ANCESTRAL SPECIES 34 ENSGT00390000004989.a.a.a.b.b ENSGT00390000004989.a.a.a.a.a ENSGT00940000160430.nb.b ENSGT00940000155594.c.b.b ENSGT00940000154025.a.g ENSGT00940000158533 ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.a.b ENSGT00390000000805.gb ENSGT00940000178827 ENSGT00940000157001.e ENSGT00390000017582.g ENSGT00940000162064.m.a.a.b ENSGT00390000016415.c ENSGT00930000151367.d.b ENSGT01030000234667.a.a.b.e.c ENSGT00940000155925.j.a.a #22 ENSGT00940000155562.l.b.c.a ENSGT00390000009209.g.a ENSGT00930000151022.a ENSGT00390000006522.a.a.i ENSGT00940000166818 ENSGT00940000157031.k.c ENSGT00940000154634.d.a ENSGT00940000154648.a.a.o.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.f ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT01010000230169 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 Atlantic salmon MODERN SPECIES 21 ENSSSAG00000062966 ENSSSAG00000062953 nrbp2b (ENSSSAG00000062977) ENSSSAG00000063063 ENSSSAG00000115829 SCRIB (ENSSSAG00000063357) ENSSSAG00000064912 ENSSSAG00000064947 ENSSSAG00000091129 ENSSSAG00000064895 ENSSSAG00000064979 ENSSSAG00000065555 ENSSSAG00000070169 ENSSSAG00000070163 ENSSSAG00000072881 ENSSSAG00000070213 #22 ENSSSAG00000070531 ENSSSAG00000115484 ENSSSAG00000071215 ENSSSAG00000071258 ENSSSAG00000071284 ENSSSAG00000071816 ENSSSAG00000071830 ENSSSAG00000117511 ENSSSAG00000088431 ENSSSAG00000071831 ENSSSAG00000071836 ENSSSAG00000109881 ENSSSAG00000071843 ENSSSAG00000071845 zgc:111976 (ENSSSAG00000091886) River trout MODERN SPECIES 36 ENSSTUG00000028861 ENSSTUG00000028857 nrbp2b (ENSSTUG00000028689) puf60b (ENSSTUG00000026887) ENSSTUG00000026842 ENSSTUG00000026839 KIF9 (ENSSTUG00000026794) cdv3 (ENSSTUG00000026780) ENSSTUG00000026777 topbp1 (ENSSTUG00000026532) DNAJC13 (ENSSTUG00000026438) ENSSTUG00000026410 lztfl1 (ENSSTUG00000026375) ENSSTUG00000026332 CCR9 (ENSSTUG00000026324) gli3 (ENSSTUG00000025961) #22 prpf4bb (ENSSTUG00000024518) PXDC1 (ENSSTUG00000024473) TMX3 (ENSSTUG00000024373) DSEL (ENSSTUG00000024364) ENSSTUG00000024337 CDH7 (ENSSTUG00000023662) ENSSTUG00000023609 ENSSTUG00000023579 ENSSTUG00000023555 ENSSTUG00000023528 ENSSTUG00000023521 ENSSTUG00000023516 ENSSTUG00000023511 zgc:111976 (ENSSTUG00000023494) ralaa (ENSSTUG00000023452) #28 Huchen MODERN SPECIES 1968 topbp1 (ENSHHUG00000029257) DNAJC13 (ENSHHUG00000029238) ENSHHUG00000029156 lztfl1 (ENSHHUG00000029150) ENSHHUG00000029141 CCR9 (ENSHHUG00000029138) gli3 (ENSHHUG00000029099) #22 prpf4bb (ENSHHUG00000029000) PXDC1 (ENSHHUG00000028994) TMX3 (ENSHHUG00000028981) Salmoninae ANCESTRAL SPECIES 509 ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00940000157001.f ENSGT00390000017582.h ENSGT00390000016415.d ENSGT01030000234667.a.a.b.e.d ENSGT00940000155925.j.a.b #22 ENSGT00940000155562.l.b.d Huchen MODERN SPECIES 142 ENSHHUG00000033778 slc4a2b (ENSHHUG00000033794) ENSHHUG00000033911 ENSHHUG00000033923 nrbp2b (ENSHHUG00000033939) puf60b (ENSHHUG00000034036) scrib (ENSHHUG00000034078) ENSHHUG00000023448 cdv3 (ENSHHUG00000023449) ENSHHUG00000023457 topbp1 (ENSHHUG00000023462) ENSHHUG00000023504 lztfl1 (ENSHHUG00000023505) ENSHHUG00000023514 ENSHHUG00000023522 #22 gli3 (ENSHHUG00000023530) #22 prpf4bb (ENSHHUG00000023541) PXDC1 (ENSHHUG00000023749) Salmoninae_a ANCESTRAL SPECIES 69 ENSGT00940000158945.t ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00940000157001.f ENSGT00390000017582.h ENSGT00390000016415.d ENSGT01030000234667.a.a.b.e.d ENSGT00940000155925.j.a.b #22 ENSGT00940000155562.l.b.d ENSGT00940000157852.a.b #26 ENSGT00940000154648.a.a.o.b.a ENSGT00940000154634.c.lb.a ENSGT00940000157031.k.d ENSGT00390000006522.a.a.j Salmo ANCESTRAL SPECIES 3 ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.b.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT01100000263520.a.a.a.a.b.a.c.b.a.b.b ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00940000157001.f ENSGT00390000017582.h ENSGT00390000016415.d ENSGT01030000234667.a.a.b.e.d ENSGT00940000155925.j.a.b #22 ENSGT00940000155562.l.b.d ENSGT00940000157852.a.b #26 ENSGT00940000154648.a.a.o.b.a ENSGT00940000154634.c.lb.a ENSGT00940000157031.k.d ENSGT00390000006522.a.a.j ENSGT00940000153866.A ENSGT00940000159246.d ENSGT00940000163461.a.a.a.b.c.b.b.b.a.b.b ENSGT00940000155540.b.a ENSGT00530000064165.b ENSGT00940000175152 ENSGT00940000157952.e.b ENSGT00530000069620 ENSGT00390000018683 River trout MODERN SPECIES 11 slc4a2b (ENSSTUG00000015584) ENSSTUG00000016302 ENSSTUG00000016318 ENSSTUG00000016328 nrbp2b (ENSSTUG00000016371) puf60b (ENSSTUG00000016865) scrib (ENSSTUG00000017075) ENSSTUG00000019668 cdv3 (ENSSTUG00000019673) ENSSTUG00000019677 ENSSTUG00000019697 topbp1 (ENSSTUG00000019714) ENSSTUG00000020117 lztfl1 (ENSSTUG00000020128) ENSSTUG00000020319 gli3 (ENSSTUG00000020354) #22 prpf4bb (ENSSTUG00000020692) ENSSTUG00000021845 #26 ENSSTUG00000021902 IMPA1 (ENSSTUG00000021932) CDH7 (ENSSTUG00000021986) ENSSTUG00000022147 enkur (ENSSTUG00000022168) RPS20 (ENSSTUG00000022178) ENSSTUG00000022193 plag1 (ENSSTUG00000022261) ENSSTUG00000022265 samd8 (ENSSTUG00000022296) ENSSTUG00000022335 KLHDC3 (ENSSTUG00000022349) ENSSTUG00000022396 Atlantic salmon MODERN SPECIES 10 ENSSSAG00000093002 ENSSSAG00000055547 slc4a2b (ENSSSAG00000055848) ENSSSAG00000070145 ENSSSAG00000070137 nrbp2b (ENSSSAG00000070181) ENSSSAG00000071208 SCRIB (ENSSSAG00000072098) ENSSSAG00000082621 cdv3 (ENSSSAG00000072389) ENSSSAG00000072393 topbp1 (ENSSSAG00000072409) ENSSSAG00000072730 ENSSSAG00000072866 ENSSSAG00000082079 ENSSSAG00000073193 #22 ENSSSAG00000073172 ENSSSAG00000073150 #26 ENSSSAG00000073138 ENSSSAG00000096910 ENSSSAG00000087143 ENSSSAG00000073131 ENSSSAG00000072943 ENSSSAG00000072920 ENSSSAG00000072912 ENSSSAG00000115609 ENSSSAG00000091716 ENSSSAG00000091206 ENSSSAG00000041086 ENSSSAG00000073210 ENSSSAG00000056964 Oncorhynchus ANCESTRAL SPECIES 28 ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00950000182774.a.a.b.b ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00390000017582.h ENSGT00940000162064.m.a.b ENSGT00390000016415.d ENSGT01030000234667.a.a.b.e.d ENSGT00940000155925.j.a.b #22 ENSGT00940000155562.l.b.d ENSGT00940000157852.a.b #26 ENSGT00940000154648.a.a.o.b.a ENSGT00940000154634.c.lb.a ENSGT00940000157031.k.d Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT01050000244857.B.a.b ENSGT00400000022514.h ENSGT00940000158259.b.h ENSGT00400000024709.k.a ENSGT00390000004989.a.a.a.a.b ENSGT00940000160430.nb.a ENSGT00940000155594.c.b.a ENSGT00940000154025.a.h ENSGT00950000182774.a.a.b.b ENSGT00390000000805.hb ENSGT00390000000626.e ENSGT00390000017582.h ENSGT00940000162064.m.a.b ENSGT00390000016415.d ENSGT01030000234667.a.a.b.e.d ENSGT00940000155925.j.a.b #22 ENSGT00940000155562.l.b.d ENSGT00940000157852.a.b #26 ENSGT00940000154648.a.a.o.b.a ENSGT00940000154634.c.lb.a ENSGT00940000157031.k.d Coho salmon MODERN SPECIES 9 SMARCD3 (ENSOKIG00005040785) CHPF2 (ENSOKIG00005040730) ENSOKIG00005040547 slc4a2b (ENSOKIG00005039887) ENSOKIG00005039851 ENSOKIG00005039831 nrbp2b (ENSOKIG00005039768) PUF60 (ENSOKIG00005039738) SCRIB (ENSOKIG00005038303) ENSOKIG00005038218 ENSOKIG00005038210 ENSOKIG00005038196 ENSOKIG00005038112 lztfl1 (ENSOKIG00005037953) ENSOKIG00005037940 ENSOKIG00005037812 #22 prpf4bb (ENSOKIG00005036853) ENSOKIG00005036340 #26 ENSOKIG00005036278 IMPA1 (ENSOKIG00005036257) ENSOKIG00005036251 CDH7 (ENSOKIG00005035963) ENSOKIG00005035918 ABCG1 (ENSOKIG00005034390) spcs2 (ENSOKIG00005034292) ENSOKIG00005034277 pgm2l1 (ENSOKIG00005033750) POR (ENSOKIG00005030795) ENSOKIG00005030573 CUL3 (ENSOKIG00005030146) ENSOKIG00005030112 Chinook salmon MODERN SPECIES 7 ENSOTSG00005026210 slc4a2b (ENSOTSG00005026217) ENSOTSG00005026758 ENSOTSG00005026759 ENSOTSG00005026760 nrbp2b (ENSOTSG00005026770) puf60b (ENSOTSG00005026773) scrib (ENSOTSG00005026788) ENSOTSG00005036396 cdv3 (ENSOTSG00005036399) ENSOTSG00005036436 DNAJC13 (ENSOTSG00005036452) ENSOTSG00005036492 lztfl1 (ENSOTSG00005036538) ENSOTSG00005036539 gli3 (ENSOTSG00005036541) #22 prpf4bb (ENSOTSG00005036543) ENSOTSG00005036548 #26 CDH7 (ENSOTSG00005036552) IMPA1 (ENSOTSG00005036553) ENSOTSG00005036554 ENSOTSG00005036556 ENSOTSG00005036557 ENSOTSG00005036562 DAG1 (ENSOTSG00005037133) pcbp4 (ENSOTSG00005037135) DOCK3 (ENSOTSG00005037141) DCAF1 (ENSOTSG00005037206) rpl32 (ENSOTSG00005037213) grip2a (ENSOTSG00005037215) SLC6A6 (ENSOTSG00005041012) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 286 ENSGT00940000155984.i.a.a.b ENSGT00940000159862.a.f ENSGT00940000155925.j.b.a #22 ENSGT00940000159213.q.a.b ENSGT00940000159158.i ENSGT00940000154817.b.a.g ENSGT00390000011515.w ENSGT00940000153568.B.q ENSGT00940000164632.a.a ENSGT00390000017724.a.b.e ENSGT00950000182905.a.a.a.a.a.a.d ENSGT00940000156507.p ENSGT00940000159893 ENSGT01030000234625.D.n ENSGT00940000156712.b.g.b ENSGT00940000156797.k ENSGT00940000158470.g ENSGT00940000158054.d.b Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155925.j.b.a #22 Salmo ANCESTRAL SPECIES 10 ENSGT00710000106813.A.ab ENSGT00530000063688.a.d ENSGT00770000121792.b ENSGT00940000156597.a.b.b.b ENSGT01030000234570.d.a.o.a ENSGT00940000154695.d.a.j.a.a ENSGT00940000157137.t ENSGT00720000108792.B.b ENSGT00940000156532 ENSGT00390000007989.z ENSGT00940000155752.m ENSGT00390000012561.b.pb.a.d.a ENSGT00940000157521.a.a.h ENSGT00940000155984.i.a.a.b ENSGT00940000159862.a.f ENSGT00940000155925.j.b.a #22 ENSGT00940000159158.i ENSGT00940000154817.b.a.g ENSGT00390000011515.w ENSGT00940000153568.B.q ENSGT00940000164632.a.a ENSGT00390000017724.a.b.e ENSGT00950000182905.a.a.a.a.a.a.d.b ENSGT00940000156507.p ENSGT00940000159893 ENSGT01030000234625.D.n ENSGT00940000156712.b.g.b ENSGT00940000156797.k ENSGT00940000158470.g ENSGT00940000158054.d.b ENSGT00530000062962.a.a.f River trout MODERN SPECIES 12 ENSSTUG00000050429 ENSSTUG00000050428 ENSSTUG00000050424 myl1 (ENSSTUG00000050417) ERBB4 (ENSSTUG00000050216) IKZF2 (ENSSTUG00000050176) vwc2l (ENSSTUG00000050173) BARD1 (ENSSTUG00000050169) pofut2 (ENSSTUG00000050133) MYO1B (ENSSTUG00000049902) BZW1 (ENSSTUG00000049832) LRP1B (ENSSTUG00000048638) RALB (ENSSTUG00000048441) inhbb (ENSSTUG00000048417) ENSSTUG00000048414 ENSSTUG00000048404 #22 tfcp2l1 (ENSSTUG00000048305) clasp1a (ENSSTUG00000046697) nifk (ENSSTUG00000046587) tsn (ENSSTUG00000046579) eaf2 (ENSSTUG00000046573) cyp27a3 (ENSSTUG00000046565) slc15a2 (ENSSTUG00000046394) hspbap1 (ENSSTUG00000046373) slc49a4 (ENSSTUG00000046331) SEMA5B (ENSSTUG00000045319) pdia5 (ENSSTUG00000045164) sec22a (ENSSTUG00000045141) adcy5 (ENSSTUG00000044954) hacd2 (ENSSTUG00000044929) stam2 (ENSSTUG00000044883) Atlantic salmon MODERN SPECIES 13 heg1 (ENSSSAG00000048774) ENSSSAG00000083816 ENSSSAG00000048794 ENSSSAG00000096922 myl1 (ENSSSAG00000048886) ERBB4 (ENSSSAG00000049188) IKZF2 (ENSSSAG00000058344) vwc2l (ENSSSAG00000058962) BARD1 (ENSSSAG00000059003) pofut2 (ENSSSAG00000059086) ENSSSAG00000059799 ENSSSAG00000064197 ENSSSAG00000064387 ENSSSAG00000098007 ENSSSAG00000080302 ENSSSAG00000065361 #22 ENSSSAG00000112678 ENSSSAG00000084634 tsn (ENSSSAG00000085312) si:dkey-91i10.2 (ENSSSAG00000079159) eaf2 (ENSSSAG00000079164) ENSSSAG00000079169 slc15a2 (ENSSSAG00000079180) hspbap1 (ENSSSAG00000079248) slc49a4 (ENSSSAG00000079252) sema5b (ENSSSAG00000079274) pdia5 (ENSSSAG00000079484) sec22a (ENSSSAG00000070315) adcy5 (ENSSSAG00000079557) hacd2 (ENSSSAG00000079692) stam2 (ENSSSAG00000079696) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155925.j.b.a #22 Rainbow trout MODERN SPECIES 14 ENSOMYG00000021565 ENSOMYG00000056290 myl1 (ENSOMYG00000021585) ERBB4 (ENSOMYG00000021728) IKZF2 (ENSOMYG00000021843) ENSOMYG00000051011 vwc2l (ENSOMYG00000021864) BARD1 (ENSOMYG00000021916) ENSOMYG00000072433 pofut2 (ENSOMYG00000021962) ENSOMYG00000022408 ENSOMYG00000023230 ENSOMYG00000024665 ENSOMYG00000027060 ENSOMYG00000027098 ENSOMYG00000027133 #22 ENSOMYG00000049337 tfcp2l1 (ENSOMYG00000027202) ENSOMYG00000029651 nifk (ENSOMYG00000042040) tsn (ENSOMYG00000042057) ENSOMYG00000068681 eaf2 (ENSOMYG00000042087) ENSOMYG00000042092 slc15a2 (ENSOMYG00000042096) hspbap1 (ENSOMYG00000042103) ENSOMYG00000042111 slc49a4 (ENSOMYG00000042128) ENSOMYG00000048452 ENSOMYG00000054103 SEMA5B (ENSOMYG00000042244) Huchen MODERN SPECIES 3386 ENSHHUG00000026189 #22 tfcp2l1 (ENSHHUG00000026029) ENSHHUG00000026017 ENSHHUG00000026023 Salmoninae ANCESTRAL SPECIES ENSGT00940000155925.j.b.b #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155925.j.b.b #22 Salmo ANCESTRAL SPECIES 15 ENSGT00940000156597.a.a.e ENSGT01030000234570.d.a.o.b ENSGT00940000157192 ENSGT00940000154695.d.a.i ENSGT00940000157137.s ENSGT00720000108792.B.a ENSGT00940000157295 ENSGT00390000007989.y ENSGT00940000155752.n ENSGT00390000007946.i.a ENSGT00390000012561.b.pb.a.c ENSGT00940000157521.a.a.g ENSGT00940000155984.i.a.a.a ENSGT00940000165735 ENSGT00940000159862.a.e ENSGT00940000155925.j.b.b #22 ENSGT00390000013973.A.a.c.a.j ENSGT00390000013973.A.a.c.a.i ENSGT00940000159158.j ENSGT00940000154817.b.a.h ENSGT00390000011515.x ENSGT00940000165301.a ENSGT00940000153568.B.r ENSGT00940000164632.a.b ENSGT00390000017724.a.b.f ENSGT00950000182905.a.a.a.a.a.a.d.a ENSGT00950000182905.a.a.a.a.a.a.c ENSGT00940000156507.o ENSGT01030000234625.D.m ENSGT00940000156712.b.g.a ENSGT00940000156797.l River trout MODERN SPECIES 16 ENSSTUG00000036725 ENSSTUG00000036719 ERBB4 (ENSSTUG00000035994) IKZF2 (ENSSTUG00000035944) ENSSTUG00000035941 vwc2l (ENSSTUG00000035913) ENSSTUG00000035078 pofut2 (ENSSTUG00000034873) MYO1B (ENSSTUG00000034132) BZW1 (ENSSTUG00000033942) ENSSTUG00000033926 LRP1B (ENSSTUG00000032694) RALB (ENSSTUG00000032648) ENSSTUG00000032640 inhbb (ENSSTUG00000032601) ENSSTUG00000032336 #22 ENSSTUG00000032311 ENSSTUG00000032301 tfcp2l1 (ENSSTUG00000032149) clasp1a (ENSSTUG00000030032) ENSSTUG00000029898 nifk (ENSSTUG00000029878) ENSSTUG00000029832 tsn (ENSSTUG00000029823) si:dkey-91i10.2 (ENSSTUG00000041402) eaf2 (ENSSTUG00000041372) cyp27a3 (ENSSTUG00000041358) cyp27a3 (ENSSTUG00000040735) slc15a2 (ENSSTUG00000040029) slc49a4 (ENSSTUG00000039942) SEMA5B (ENSSTUG00000039127) Atlantic salmon MODERN SPECIES 17 CPS1 (ENSSSAG00000059835) ERBB4 (ENSSSAG00000058469) IKZF2 (ENSSSAG00000110212) vwc2l (ENSSSAG00000091895) ENSSSAG00000057999 pofut2 (ENSSSAG00000057883) ENSSSAG00000053702 ENSSSAG00000103701 ENSSSAG00000053626 ENSSSAG00000080775 ENSSSAG00000091946 ENSSSAG00000080380 ENSSSAG00000065344 ENSSSAG00000104603 ENSSSAG00000120854 ENSSSAG00000080255 #22 ENSSSAG00000108395 tfcp2l1 (ENSSSAG00000080239) clasp1a (ENSSSAG00000119244) nifk (ENSSSAG00000071820) ENSSSAG00000071814 tsn (ENSSSAG00000089485) si:dkey-91i10.2 (ENSSSAG00000071800) eaf2 (ENSSSAG00000071797) cyp27a3 (ENSSSAG00000091894) ENSSSAG00000096528 cyp27a3 (ENSSSAG00000071743) slc15a2 (ENSSSAG00000071701) slc49a4 (ENSSSAG00000071686) SEMA5B (ENSSSAG00000070625) pdia5 (ENSSSAG00000070342) Salmoninae ANCESTRAL SPECIES 748 ENSGT01060000249735 ENSGT00940000161153.a ENSGT00440000033720.a.a.b.d ENSGT01000000215583.b ENSGT00940000178385.b ENSGT00940000156353.u.b.b ENSGT00940000157211.k.c ENSGT00940000155984.i.a.b.b ENSGT00940000159862.b.e ENSGT00940000155925.k #22 ENSGT00940000154817.b.b.b.p.d.a.a.a.b Huchen MODERN SPECIES 142 CHPF2 (ENSHHUG00000033774) ENSHHUG00000033778 slc4a2b (ENSHHUG00000033794) ENSHHUG00000033911 ENSHHUG00000033923 nrbp2b (ENSHHUG00000033939) puf60b (ENSHHUG00000034036) scrib (ENSHHUG00000034078) ENSHHUG00000023448 cdv3 (ENSHHUG00000023449) ENSHHUG00000023457 topbp1 (ENSHHUG00000023462) ENSHHUG00000023504 lztfl1 (ENSHHUG00000023505) ENSHHUG00000023514 ENSHHUG00000023522 #22 gli3 (ENSHHUG00000023530) #22 prpf4bb (ENSHHUG00000023541) PXDC1 (ENSHHUG00000023749) Salmoninae_a ANCESTRAL SPECIES 710 ENSGT00940000155925.k #22 ENSGT00940000154817.b.b.b.p.d.a.a.a.b Salmo ANCESTRAL SPECIES 41 ENSGT00940000161628 ENSGT00940000159942.a.c.a.k ENSGT00940000159832.k ENSGT00390000014753.b ENSGT00940000156607.a.a.mb.a ENSGT01060000249735 ENSGT00940000161153.a ENSGT00440000033720.a.a.b.d ENSGT01000000215583.b ENSGT01000000215583.a.a.a ENSGT00940000178385.b.b ENSGT00940000156353.u.b.b ENSGT00940000157211.k.c ENSGT00940000155984.i.a.b.b ENSGT00940000159862.b.e ENSGT00940000155925.k #22 ENSGT00940000154817.b.b.b.p.d.a.a.a.b ENSGT00940000158265.v ENSGT00940000164897.a.b.c.d ENSGT00390000005717.s.h ENSGT00940000155212.ab.a.k ENSGT00950000183115.b.a.m.b.c ENSGT00940000156089.e.a.e.a ENSGT00500000044939.j.a ENSGT00390000005159.j.a.b ENSGT00940000156444.c.c.a ENSGT00940000155861.C.e.c ENSGT00940000159606.c ENSGT00940000158239.a.b.e.e ENSGT00940000154319.e.a ENSGT00940000156884.c.a Atlantic salmon MODERN SPECIES 8 ENSSSAG00000083022 ENSSSAG00000085889 ENSSSAG00000059684 ENSSSAG00000059730 ENSSSAG00000061329 STS (ENSSSAG00000061436) ENSSSAG00000063259 ENSSSAG00000063296 ENSSSAG00000089279 ENSSSAG00000095828 ENSSSAG00000063321 ENSSSAG00000120212 INHBB (ENSSSAG00000063609) ENSSSAG00000109853 ENSSSAG00000088525 ENSSSAG00000063636 #22 ENSSSAG00000063989 CLCN4 (ENSSSAG00000076737) ENSSSAG00000122046 ENSSSAG00000046061 SHROOM2 (ENSSSAG00000076946) ITM2B (ENSSSAG00000076952) ENSSSAG00000076958 cyp20a1 (ENSSSAG00000076973) tmem237b (ENSSSAG00000076979) MPP4 (ENSSSAG00000076985) ALS2 (ENSSSAG00000077078) cdk15 (ENSSSAG00000077326) FZD7 (ENSSSAG00000090681) sumo1 (ENSSSAG00000039756) ENSSSAG00000104661 River trout MODERN SPECIES 32 gyg2 (ENSSTUG00000048768) zgc:153142 (ENSSTUG00000048765) MXRA5 (ENSSTUG00000048742) ENSSTUG00000048723 pudp (ENSSTUG00000048715) nlgn4xa (ENSSTUG00000048619) ENSSTUG00000048604 STS (ENSSTUG00000048565) anos1a (ENSSTUG00000048498) ENSSTUG00000048477 ENSSTUG00000048473 MRAS (ENSSTUG00000048467) ENSSTUG00000048313 ENSSTUG00000048301 INHBB (ENSSTUG00000048291) ENSSTUG00000048266 #22 CLASP1 (ENSSTUG00000048061) clcn4 (ENSSTUG00000047114) ENSSTUG00000047030 ENSSTUG00000047027 SHROOM2 (ENSSTUG00000047015) itm2ba (ENSSTUG00000047005) abi2b (ENSSTUG00000046952) cyp20a1 (ENSSTUG00000046939) tmem237b (ENSSTUG00000046920) MPP4 (ENSSTUG00000046490) ENSSTUG00000046467 ALS2 (ENSSTUG00000046283) cdk15 (ENSSTUG00000046252) FZD7 (ENSSTUG00000046239) sumo1 (ENSSTUG00000046224) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155925.k #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155925.k #22 Coho salmon MODERN SPECIES 25 gyg2 (ENSOKIG00005046538) zgc:153142 (ENSOKIG00005046528) MXRA5 (ENSOKIG00005046522) PRKX (ENSOKIG00005046509) pudp (ENSOKIG00005046504) ENSOKIG00005046403 STS (ENSOKIG00005046383) ENSOKIG00005046378 anos1a (ENSOKIG00005046275) ENSOKIG00005046229 ENSOKIG00005046216 MRAS (ENSOKIG00005046190) ENSOKIG00005046076 ENSOKIG00005046047 INHBB (ENSOKIG00005046030) ENSOKIG00005045961 #22 CLASP1 (ENSOKIG00005043085) clcn4 (ENSOKIG00005041364) ENSOKIG00005041256 ENSOKIG00005041241 SHROOM2 (ENSOKIG00005041211) ENSOKIG00005041000 CYP20A1 (ENSOKIG00005040611) tmem237b (ENSOKIG00005040561) itm2ba (ENSOKIG00005040503) MPP4 (ENSOKIG00005039734) ENSOKIG00005039681 ALS2 (ENSOKIG00005038534) cdk15 (ENSOKIG00005038410) FZD7 (ENSOKIG00005038385) sumo1 (ENSOKIG00005038335) Rainbow trout MODERN SPECIES 28 ENSOMYG00000057791 ENSOMYG00000072229 ENSOMYG00000021193 ENSOMYG00000021183 ENSOMYG00000062376 ENSOMYG00000020901 ENSOMYG00000020828 STS (ENSOMYG00000020806) ENSOMYG00000020721 ENSOMYG00000020695 ENSOMYG00000076453 ENSOMYG00000020666 ENSOMYG00000020536 ENSOMYG00000020491 ENSOMYG00000020483 ENSOMYG00000020433 #22 ENSOMYG00000019724 clcn4 (ENSOMYG00000019302) ENSOMYG00000019108 ENSOMYG00000019101 SHROOM2 (ENSOMYG00000019092) abi2b (ENSOMYG00000018986) cyp20a1 (ENSOMYG00000018865) tmem237b (ENSOMYG00000018836) MPP4 (ENSOMYG00000017951) ENSOMYG00000017890 ALS2 (ENSOMYG00000017007) cdk15 (ENSOMYG00000016483) FZD7 (ENSOMYG00000016464) sumo1 (ENSOMYG00000016398) ENSOMYG00000015706 Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Cod MODERN SPECIES 15 nrbp2b (ENSGMOG00000006362) ENSGMOG00000006392 ENSGMOG00000037063 ENSGMOG00000006430 ENSGMOG00000006464 ENSGMOG00000006532 ENSGMOG00000033944 ENSGMOG00000028505 cdv3 (ENSGMOG00000006565) ENSGMOG00000030101 topbp1 (ENSGMOG00000006604) ENSGMOG00000030716 ENSGMOG00000006633 ENSGMOG00000006691 ENSGMOG00000006700 ENSGMOG00000006713 #22 ENSGMOG00000006746 ENSGMOG00000006767 ENSGMOG00000006776 ENSGMOG00000034537 ENSGMOG00000022802 ENSGMOG00000025758 ENSGMOG00000009286 ENSGMOG00000025232 ENSGMOG00000009306 ENSGMOG00000009410 ENSGMOG00000009482 ENSGMOG00000035067 zgc:111976 (ENSGMOG00000009505) ralaa (ENSGMOG00000009539) #28 ENSGMOG00000031034 #26 Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Pinecone sodierfish MODERN SPECIES 12 slc4a2b (ENSMMDG00005018857) ENSMMDG00005018835 ENSMMDG00005018834 ENSMMDG00005018832 nrbp2b (ENSMMDG00005018524) puf60b (ENSMMDG00005017582) scrib (ENSMMDG00005017544) KIF9 (ENSMMDG00005017533) cdv3 (ENSMMDG00005017527) ENSMMDG00005017526 ENSMMDG00005017525 topbp1 (ENSMMDG00005017504) DNAJC13 (ENSMMDG00005017424) lztfl1 (ENSMMDG00005017413) CCR9 (ENSMMDG00005017409) gli3 (ENSMMDG00005017396) #22 prpf4bb (ENSMMDG00005016376) PXDC1 (ENSMMDG00005016343) TMX3 (ENSMMDG00005016329) DSEL (ENSMMDG00005016328) ENSMMDG00005016324 CDH7 (ENSMMDG00005016223) ENSMMDG00005016204 IMPA1 (ENSMMDG00005016200) ENSMMDG00005016198 ENSMMDG00005016195 ENSMMDG00005015975 ENSMMDG00005015960 zgc:111976 (ENSMMDG00005015954) ralaa (ENSMMDG00005015949) #28 ENSMMDG00005015795 #26 Percomorphaceae ANCESTRAL SPECIES 28 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Tiger tail seahorse MODERN SPECIES 39 vipr2 (ENSHCOG00000008103) ENSHCOG00000008090 msl2b (ENSHCOG00000008058) tnfsf10 (ENSHCOG00000008056) nceh1b.1 (ENSHCOG00000008011) pdha1b (ENSHCOG00000007812) rps6ka3b (ENSHCOG00000007777) eif1axa (ENSHCOG00000007746) ENSHCOG00000007743 ENSHCOG00000007734 ENSHCOG00000007711 lztfl1 (ENSHCOG00000007637) DNAJC13 (ENSHCOG00000007182) topbp1 (ENSHCOG00000002411) ENSHCOG00000002387 gli3 (ENSHCOG00000002344) #22 prpf4bb (ENSHCOG00000002237) PXDC1 (ENSHCOG00000002223) TMX3 (ENSHCOG00000002207) DSEL (ENSHCOG00000002183) ENSHCOG00000002172 ENSHCOG00000002139 Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Anabantaria ANCESTRAL SPECIES 22 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 12 si:ch1073-406l10.2 (ENSMAMG00000027037) ENSMAMG00000025596 ENSMAMG00000028109 ENSMAMG00000026698 ENSMAMG00000027119 nrbp2b (ENSMAMG00000028463) ENSMAMG00000010394 SCRIB (ENSMAMG00000010469) ENSMAMG00000010540 cdv3 (ENSMAMG00000028674) ENSMAMG00000010595 topbp1 (ENSMAMG00000010610) ENSMAMG00000010771 ENSMAMG00000010865 ENSMAMG00000010895 ENSMAMG00000010901 #22 ENSMAMG00000010914 ENSMAMG00000025237 TMX3 (ENSMAMG00000010964) ENSMAMG00000010976 ENSMAMG00000010986 CDH7 (ENSMAMG00000011015) IMPA1 (ENSMAMG00000027128) ENSMAMG00000011058 ENSMAMG00000011079 ENSMAMG00000026127 ENSMAMG00000011113 #28 ENSMAMG00000011120 #26 ENSMAMG00000011137 ENSMAMG00000011156 ca2 (ENSMAMG00000011166) Zig-zag eel MODERN SPECIES 13 ENSMAMG00000007522 ENSMAMG00000007555 ENSMAMG00000007587 ENSMAMG00000008526 ENSMAMG00000008539 ENSMAMG00000008574 ENSMAMG00000026151 arglu1a (ENSMAMG00000024802) efnb2a (ENSMAMG00000026875) ENSMAMG00000026788 ENSMAMG00000008656 gtpbp8 (ENSMAMG00000008709) slc10a2 (ENSMAMG00000028476) ENSMAMG00000008731 ENSMAMG00000008751 ENSMAMG00000008771 #22 clasp1a (ENSMAMG00000008838) ENSMAMG00000008963 ENSMAMG00000008986 ENSMAMG00000009052 ENSMAMG00000009100 ENSMAMG00000009139 ENSMAMG00000009192 ENSMAMG00000009353 ENSMAMG00000027486 ENSMAMG00000024269 cops8 (ENSMAMG00000009503) COL6A3 (ENSMAMG00000009541) ENSMAMG00000009662 ENSMAMG00000009845 ENSMAMG00000025350 Anabantoidei ANCESTRAL SPECIES 20 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Siamese fighting fish MODERN SPECIES 15 slc4a2b (ENSBSLG00000014467) ENSBSLG00000015066 ENSBSLG00000015068 ENSBSLG00000015073 ENSBSLG00000015202 ENSBSLG00000015281 nrbp2b (ENSBSLG00000015382) puf60b (ENSBSLG00000015867) scrib (ENSBSLG00000016884) cdv3 (ENSBSLG00000018081) ENSBSLG00000018084 topbp1 (ENSBSLG00000018201) DNAJC13 (ENSBSLG00000018339) lztfl1 (ENSBSLG00000018601) ENSBSLG00000018613 gli3 (ENSBSLG00000018803) #22 prpf4bb (ENSBSLG00000019079) PXDC1 (ENSBSLG00000019354) TMX3 (ENSBSLG00000019360) ENSBSLG00000019416 CDH7 (ENSBSLG00000019482) ENSBSLG00000019745 ENSBSLG00000019752 ENSBSLG00000008261 ENSBSLG00000008282 ENSBSLG00000008327 ENSBSLG00000008356 FBXL7 (ENSBSLG00000008384) zgc:111976 (ENSBSLG00000008406) ralaa (ENSBSLG00000008442) #28 ENSBSLG00000008486 #26 Climbing perch MODERN SPECIES 11 ENSATEG00000027615 ENSATEG00000001869 ENSATEG00000001831 ENSATEG00000027507 ENSATEG00000001798 nrbp2b (ENSATEG00000001781) ENSATEG00000001730 SCRIB (ENSATEG00000000909) ENSATEG00000000800 cdv3 (ENSATEG00000028179) ENSATEG00000000754 topbp1 (ENSATEG00000000533) ENSATEG00000000287 ENSATEG00000000230 ENSATEG00000000224 ENSATEG00000000138 #22 ENSATEG00000000121 ENSATEG00000025856 TMX3 (ENSATEG00000026110) ENSATEG00000000054 ENSATEG00000023505 ENSATEG00000023502 CDH7 (ENSATEG00000023496) ENSATEG00000023483 ENSATEG00000023488 ENSATEG00000023480 ENSATEG00000023474 ENSATEG00000023457 ENSATEG00000023441 ENSATEG00000027197 ENSATEG00000025214 Carangaria ANCESTRAL SPECIES 21 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b ENSGT00940000164239.b.b Turbot MODERN SPECIES 9 ENSSMAG00000023883 enpp7.2 (ENSSMAG00000016258) ENSSMAG00000034797 ENSSMAG00000016287 ENSSMAG00000022875 NRBP2 (ENSSMAG00000016325) ENSSMAG00000016381 SCRIB (ENSSMAG00000016403) cdv3 (ENSSMAG00000031905) ENSSMAG00000027206 topbp1 (ENSSMAG00000016593) ENSSMAG00000017046 ENSSMAG00000017090 ENSSMAG00000022979 ENSSMAG00000029973 ENSSMAG00000017105 #22 ENSSMAG00000017121 ENSSMAG00000017176 TMX3 (ENSSMAG00000017199) ENSSMAG00000021797 ENSSMAG00000030856 ENSSMAG00000017227 ENSSMAG00000017236 CDH7 (ENSSMAG00000016214) ENSSMAG00000019247 ENSSMAG00000019308 ENSSMAG00000019324 ENSSMAG00000019355 #26 ENSSMAG00000025844 #28 ENSSMAG00000019384 ENSSMAG00000028100 Tongue sole MODERN SPECIES 13 ralaa (ENSCSEG00000019417) #28 FBXL7 (ENSCSEG00000019422) ENSCSEG00000019424 ENSCSEG00000019426 IMPA1 (ENSCSEG00000019428) ENSCSEG00000019435 CDH7 (ENSCSEG00000019444) ENSCSEG00000019451 ENSCSEG00000019458 cdv3 (ENSCSEG00000019476) ENSCSEG00000019477 topbp1 (ENSCSEG00000019484) DNAJC13 (ENSCSEG00000019506) lztfl1 (ENSCSEG00000019570) CCR9 (ENSCSEG00000019575) gli3 (ENSCSEG00000019592) #22 prpf4bb (ENSCSEG00000019624) PXDC1 (ENSCSEG00000019636) TMX3 (ENSCSEG00000019642) DSEL (ENSCSEG00000019666) scrib (ENSCSEG00000019685) fam49bb (ENSCSEG00000019799) eef1a1l3 (ENSCSEG00000019807) ASAP1 (ENSCSEG00000019814) ENSCSEG00000019827 NFX1 (ENSCSEG00000019832) smarcd3b (ENSCSEG00000019844) CHPF2 (ENSCSEG00000019853) abcf2a (ENSCSEG00000019855) ENSCSEG00000019865 slc4a2b (ENSCSEG00000019871) Carangaria_A ANCESTRAL SPECIES 15 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000178525 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Seriola ANCESTRAL SPECIES 27 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000178525 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00950000183098.b.a.b ENSGT00390000001455.b ENSGT00390000010255 ENSGT00940000156069 ENSGT00940000172071 ENSGT00940000168188 ENSGT00730000111317 ENSGT00940000158167 ENSGT01030000234510.a.a.a.a.a.b ENSGT00730000111052 ENSGT00940000154673.a.d.a ENSGT00940000154187.a.a ENSGT00940000154673.b ENSGT00940000157512.j Greater amberjack MODERN SPECIES 217 slc4a2b (ENSSDUG00000009824) ENSSDUG00000009855 ENSSDUG00000009867 ENSSDUG00000009876 nrbp2b (ENSSDUG00000009888) puf60b (ENSSDUG00000009935) scrib (ENSSDUG00000010268) ENSSDUG00000010340 cdv3 (ENSSDUG00000010355) ENSSDUG00000010369 topbp1 (ENSSDUG00000010416) DNAJC13 (ENSSDUG00000010481) lztfl1 (ENSSDUG00000010599) CCR9 (ENSSDUG00000010618) ENSSDUG00000010640 gli3 (ENSSDUG00000010654) #22 prpf4bb (ENSSDUG00000010691) psme2 (ENSSDUG00000010723) lsm5 (ENSSDUG00000010762) avl9 (ENSSDUG00000010775) kbtbd2 (ENSSDUG00000010838) ENSSDUG00000010850 ENSSDUG00000010889 RNF152 (ENSSDUG00000010902) CDH20 (ENSSDUG00000010908) mc4r (ENSSDUG00000010921) drosha (ENSSDUG00000010944) CDH6 (ENSSDUG00000011082) CDH10 (ENSSDUG00000011139) cdh12a (ENSSDUG00000011299) CDH18 (ENSSDUG00000011342) Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 3243 ENSSLDG00000025046 ENSSLDG00000025049 ENSSLDG00000025053 cdv3 (ENSSLDG00000025054) ENSSLDG00000025058 topbp1 (ENSSLDG00000025063) DNAJC13 (ENSSLDG00000025080) lztfl1 (ENSSLDG00000025200) CCR9 (ENSSLDG00000025208) ENSSLDG00000025210 gli3 (ENSSLDG00000025212) #22 prpf4bb (ENSSLDG00000025223) psme2 (ENSSLDG00000025234) lsm5 (ENSSLDG00000025242) avl9 (ENSSLDG00000025245) kbtbd2 (ENSSLDG00000025256) ENSSLDG00000025258 ENSSLDG00000025260 RNF152 (ENSSLDG00000025262) CDH20 (ENSSLDG00000025263) mc4r (ENSSLDG00000025269) drosha (ENSSLDG00000025271) CDH6 (ENSSLDG00000025285) ENSSLDG00000025288 CDH10 (ENSSLDG00000025290) cdh12a (ENSSLDG00000025295) Yellowtail amberjack MODERN SPECIES 2963 ENSSLDG00000012478 gtpbp8 (ENSSLDG00000012459) slc10a2 (ENSSLDG00000012435) ENSSLDG00000012416 inhbb (ENSSLDG00000012396) ENSSLDG00000012387 ENSSLDG00000012366 #22 ENSSLDG00000012351 ENSSLDG00000012342 Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.b ENSGT00390000004989.a.b.a ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00940000162058 ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 21 ENSTNIG00000017140 smarcd3b (ENSTNIG00000017141) CHPF2 (ENSTNIG00000017142) abcf2a (ENSTNIG00000017143) ENSTNIG00000017144 slc4a2b (ENSTNIG00000017145) ENSTNIG00000017146 nrbp2b (ENSTNIG00000013676) puf60b (ENSTNIG00000013675) scrib (ENSTNIG00000013674) cdv3 (ENSTNIG00000013673) topbp1 (ENSTNIG00000013672) DNAJC13 (ENSTNIG00000013671) lztfl1 (ENSTNIG00000013670) CCR9 (ENSTNIG00000013669) gli3 (ENSTNIG00000013668) #22 prpf4bb (ENSTNIG00000013667) PXDC1 (ENSTNIG00000013666) TMX3 (ENSTNIG00000013665) DSEL (ENSTNIG00000013664) ENSTNIG00000013663 CDH7 (ENSTNIG00000013662) ENSTNIG00000013661 IMPA1 (ENSTNIG00000013660) tbcc (ENSTNIG00000013659) ENSTNIG00000013658 ENSTNIG00000013657 FBXL7 (ENSTNIG00000013656) ENSTNIG00000000348 ralaa (ENSTNIG00000013655) #28 ENSTNIG00000013654 #26 Tetraodon MODERN SPECIES 13 insig2 (ENSTNIG00000005976) si:dkey-251i10.3 (ENSTNIG00000005975) efnb2a (ENSTNIG00000017824) gtpbp8 (ENSTNIG00000017825) slc10a2 (ENSTNIG00000017826) ENSTNIG00000017827 ENSTNIG00000000433 inhbb (ENSTNIG00000000778) ENSTNIG00000017828 #22 tfcp2l1 (ENSTNIG00000017829) clasp1a (ENSTNIG00000017830) nifk (ENSTNIG00000017831) ENSTNIG00000017832 zgc:172295 (ENSTNIG00000017833) ddx18 (ENSTNIG00000017834) actr3 (ENSTNIG00000017835) ENSTNIG00000017836 ENSTNIG00000017837 ENSTNIG00000001179 ENSTNIG00000001233 ENSTNIG00000017839 trim63b (ENSTNIG00000017841) cops8 (ENSTNIG00000017840) COL6A3 (ENSTNIG00000017842) Fugu DUPLICATION Fugu MODERN SPECIES 1 ENSTRUG00000021158 ENSTRUG00000025521 ENSTRUG00000021475 ENSTRUG00000024352 ENSTRUG00000024686 ENSTRUG00000032484 nrbp2b (ENSTRUG00000004607) puf60b (ENSTRUG00000005420) scrib (ENSTRUG00000005856) cdv3 (ENSTRUG00000006425) ENSTRUG00000022607 topbp1 (ENSTRUG00000006528) DNAJC13 (ENSTRUG00000006944) lztfl1 (ENSTRUG00000007474) CCR9 (ENSTRUG00000023885) gli3 (ENSTRUG00000007692) #22 prpf4bb (ENSTRUG00000008327) TMX3 (ENSTRUG00000008670) DSEL (ENSTRUG00000024518) ENSTRUG00000030570 ENSTRUG00000008877 CDH7 (ENSTRUG00000009801) ENSTRUG00000025159 IMPA1 (ENSTRUG00000003868) tbcc (ENSTRUG00000003841) ENSTRUG00000013443 ENSTRUG00000003858 ENSTRUG00000019531 zgc:111976 (ENSTRUG00000013406) ralaa (ENSTRUG00000013360) #28 ENSTRUG00000013317 #26 Fugu MODERN SPECIES slc37a1 (ENSTRUG00000017573) ENSTRUG00000017592 TMEM50B (ENSTRUG00000024423) ifngr2 (ENSTRUG00000017603) il10rb (ENSTRUG00000022369) ENSTRUG00000017619 ENSTRUG00000017620 ENSTRUG00000030055 ENSTRUG00000032922 ENSTRUG00000001494 ENSTRUG00000032182 slc10a2 (ENSTRUG00000001580) ENSTRUG00000025216 inhbb (ENSTRUG00000020085) ENSTRUG00000033480 ENSTRUG00000001954 #22 tfcp2l1 (ENSTRUG00000002438) clasp1a (ENSTRUG00000003681) nifk (ENSTRUG00000005206) ENSTRUG00000005320 zgc:172295 (ENSTRUG00000005395) ddx18 (ENSTRUG00000005649) actr3 (ENSTRUG00000005816) ENSTRUG00000006248 ENSTRUG00000021752 ENSTRUG00000027591 trim63b (ENSTRUG00000007735) ENSTRUG00000026530 cops8 (ENSTRUG00000007598) ENSTRUG00000007787 MLPH (ENSTRUG00000008356) Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00390000017291.a.e.e.a ENSGT00760000120378 ENSGT00390000017291.a.e.e.b ENSGT00940000158009.a ENSGT00660000095569.c Ballan wrasse MODERN SPECIES 59 ENSLBEG00000012827 ENSLBEG00000012811 ENSLBEG00000012794 nrbp2b (ENSLBEG00000012720) ENSLBEG00000012670 puf60b (ENSLBEG00000012505) scrib (ENSLBEG00000012249) KIF9 (ENSLBEG00000012184) cdv3 (ENSLBEG00000012160) ENSLBEG00000012142 topbp1 (ENSLBEG00000011978) DNAJC13 (ENSLBEG00000011792) lztfl1 (ENSLBEG00000011723) CCR9 (ENSLBEG00000011710) ENSLBEG00000011688 gli3 (ENSLBEG00000011632) #22 prpf4bb (ENSLBEG00000011594) PXDC1 (ENSLBEG00000011560) TMX3 (ENSLBEG00000011491) DSEL (ENSLBEG00000011460) ENSLBEG00000011416 CDH7 (ENSLBEG00000011365) ENSLBEG00000011337 IMPA1 (ENSLBEG00000011318) ENSLBEG00000011294 ENSLBEG00000011259 ENSLBEG00000011238 ENSLBEG00000011215 FBXL7 (ENSLBEG00000011195) zgc:111976 (ENSLBEG00000011144) ralaa (ENSLBEG00000011106) #28 Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00760000120378 ENSGT00390000017291.a.e.e.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00980000198573.a.b ENSGT00390000017291.a.e.e.b ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c Gilthead seabream MODERN SPECIES 23 il10rb (ENSSAUG00010022337) IL10RB (ENSSAUG00010022330) ENSSAUG00010022327 ENSSAUG00010022324 ENSSAUG00010022323 ENSSAUG00010022322 ENSSAUG00010022306 arglu1a (ENSSAUG00010022305) efnb2a (ENSSAUG00010022303) gtpbp8 (ENSSAUG00010022300) slc10a2 (ENSSAUG00010022299) ENSSAUG00010022296 inhbb (ENSSAUG00010022293) ENSSAUG00010022288 ENSSAUG00010022286 ENSSAUG00010022253 #22 ENSSAUG00010022251 ENSSAUG00010022248 ENSSAUG00010022246 tfcp2l1 (ENSSAUG00010022242) tfcp2l1 (ENSSAUG00010022237) clasp1a (ENSSAUG00010018312) nifk (ENSSAUG00010018263) ENSSAUG00010018261 zgc:172295 (ENSSAUG00010015328) ddx18 (ENSSAUG00010015230) actr3 (ENSSAUG00010014775) ENSSAUG00010010808 ENSSAUG00010010749 cops8 (ENSSAUG00010010746) COL6A3 (ENSSAUG00010010741) Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00980000198573.a.b ENSGT00390000017291.a.e.e.b ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c Large yellow croaker MODERN SPECIES SCAI (ENSLCRG00005023378) ODF2 (ENSLCRG00005023382) sptan1 (ENSLCRG00005023399) dync2i2 (ENSLCRG00005023410) setb (ENSLCRG00005023412) ENSLCRG00005023415 zdhhc12b (ENSLCRG00005023435) uap1l1 (ENSLCRG00005001461) arglu1a (ENSLCRG00005001497) efnb2a (ENSLCRG00005001511) ENSLCRG00005001521 gtpbp8 (ENSLCRG00005001536) slc10a2 (ENSLCRG00005001550) ENSLCRG00005001566 inhbb (ENSLCRG00005001583) ENSLCRG00005001637 #22 ENSLCRG00005002008 tfcp2l1 (ENSLCRG00005002060) clasp1a (ENSLCRG00005003217) nifk (ENSLCRG00005007317) ENSLCRG00005007322 ENSLCRG00005007323 ENSLCRG00005007324 ENSLCRG00005007325 ENSLCRG00005007335 pcbp3 (ENSLCRG00005007381) lrrc3 (ENSLCRG00005007390) ENSLCRG00005007392 ENSLCRG00005007405 ENSLCRG00005007962 gulp1a (ENSLCRG00005007966) European seabass DUPLICATION European seabass MODERN SPECIES 8 ENSDLAG00005032892 ENSDLAG00005033004 ENSDLAG00005002430 ENSDLAG00005015072 ENSDLAG00005028684 nrbp2b (ENSDLAG00005010649) PUF60 (ENSDLAG00005010681) SCRIB (ENSDLAG00005011079) ENSDLAG00005014308 CDV3 (ENSDLAG00005027394) ENSDLAG00005029165 topbp1 (ENSDLAG00005014452) ENSDLAG00005016083 ENSDLAG00005018018 ENSDLAG00005018027 ENSDLAG00005018034 #22 ENSDLAG00005018128 ENSDLAG00005031002 TMX3 (ENSDLAG00005018419) ENSDLAG00005034393 ENSDLAG00005018832 CDH7 (ENSDLAG00005018907) ENSDLAG00005019941 ENSDLAG00005019957 ENSDLAG00005019997 ENSDLAG00005027259 ENSDLAG00005027155 ENSDLAG00005020046 ENSDLAG00005020061 zgc:111976 (ENSDLAG00005031816) RALA (ENSDLAG00005027457) #28 European seabass MODERN SPECIES 5 ENSDLAG00005014894 ENSDLAG00005026869 ENSDLAG00005014884 ENSDLAG00005035016 ENSDLAG00005032542 ENSDLAG00005034016 ENSDLAG00005034293 ENSDLAG00005029736 arglu1a (ENSDLAG00005014847) efnb2a (ENSDLAG00005029491) ENSDLAG00005015825 gtpbp8 (ENSDLAG00005014813) slc10a2 (ENSDLAG00005032437) ENSDLAG00005014783 ENSDLAG00005033701 ENSDLAG00005014510 #22 ENSDLAG00005014498 tfcp2l1 (ENSDLAG00005014406) ENSDLAG00005000963 ENSDLAG00005000440 ENSDLAG00005032744 ENSDLAG00005000428 ENSDLAG00005000423 SLC37A1 (ENSDLAG00005000308) wdr4 (ENSDLAG00005000167) ENSDLAG00005030499 ENSDLAG00005035058 ENSDLAG00005028215 PKNOX1 (ENSDLAG00005028341) CCDC93 (ENSDLAG00005024259) ENSDLAG00005030676 Perciformes DUPLICATION Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES 131 ENSGT00940000178137 ENSGT00940000155925.v.a #22 Perciformes_a ANCESTRAL SPECIES 243 ENSGT00940000178137 ENSGT00940000155925.v.a #22 Channel bull blenny MODERN SPECIES 12 ENSCGOG00000022001 slc4a2b (ENSCGOG00000022017) ENSCGOG00000022177 ENSCGOG00000022178 ENSCGOG00000022180 nrbp2b (ENSCGOG00000022184) puf60b (ENSCGOG00000022205) scrib (ENSCGOG00000022394) KIF9 (ENSCGOG00000022912) cdv3 (ENSCGOG00000022916) ENSCGOG00000022917 topbp1 (ENSCGOG00000022933) lztfl1 (ENSCGOG00000023282) CCR9 (ENSCGOG00000023289) ENSCGOG00000023293 ENSCGOG00000023295 #22 gli3 (ENSCGOG00000023297) #22 prpf4bb (ENSCGOG00000023299) PXDC1 (ENSCGOG00000023300) TMX3 (ENSCGOG00000023304) ENSCGOG00000012560 CDH7 (ENSCGOG00000012585) ENSCGOG00000013926 IMPA1 (ENSCGOG00000013998) ENSCGOG00000014154 ENSCGOG00000014158 FBXL7 (ENSCGOG00000014172) ralaa (ENSCGOG00000014177) #28 ENSCGOG00000014202 #26 ENSCGOG00000014226 ENSCGOG00000014232 Perciformes ANCESTRAL SPECIES 21 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925.v.b #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Perciformes_a ANCESTRAL SPECIES 22 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925.v.b #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Pike perch MODERN SPECIES 94 slc4a2b (ENSSLUG00000009083) ENSSLUG00000008888 ENSSLUG00000008884 ENSSLUG00000008874 ENSSLUG00000008860 nrbp2b (ENSSLUG00000008558) puf60b (ENSSLUG00000007426) scrib (ENSSLUG00000007213) ENSSLUG00000007100 cdv3 (ENSSLUG00000007067) ENSSLUG00000007055 topbp1 (ENSSLUG00000006820) DNAJC13 (ENSSLUG00000006785) lztfl1 (ENSSLUG00000006778) CCR9 (ENSSLUG00000006768) gli3 (ENSSLUG00000006508) #22 prpf4bb (ENSSLUG00000006383) PXDC1 (ENSSLUG00000006361) TMX3 (ENSSLUG00000005573) Channel bull blenny MODERN SPECIES 12 slc4a2b (ENSCGOG00000022017) ENSCGOG00000022177 ENSCGOG00000022178 ENSCGOG00000022180 nrbp2b (ENSCGOG00000022184) puf60b (ENSCGOG00000022205) scrib (ENSCGOG00000022394) KIF9 (ENSCGOG00000022912) cdv3 (ENSCGOG00000022916) ENSCGOG00000022917 topbp1 (ENSCGOG00000022933) lztfl1 (ENSCGOG00000023282) CCR9 (ENSCGOG00000023289) ENSCGOG00000023293 ENSCGOG00000023295 #22 gli3 (ENSCGOG00000023297) #22 prpf4bb (ENSCGOG00000023299) PXDC1 (ENSCGOG00000023300) TMX3 (ENSCGOG00000023304) ENSCGOG00000012560 CDH7 (ENSCGOG00000012585) ENSCGOG00000013926 IMPA1 (ENSCGOG00000013998) ENSCGOG00000014154 ENSCGOG00000014158 FBXL7 (ENSCGOG00000014172) ralaa (ENSCGOG00000014177) #28 ENSCGOG00000014202 #26 ENSCGOG00000014226 ENSCGOG00000014232 rad51b (ENSCGOG00000014235) Cottioidei ANCESTRAL SPECIES 21 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925.v.b #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.f ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Lumpfish MODERN SPECIES 12 abcf2a (ENSCLMG00005013875) ENSCLMG00005013869 slc4a2b (ENSCLMG00005013816) ENSCLMG00005013812 ENSCLMG00005013811 ENSCLMG00005013810 nrbp2b (ENSCLMG00005013807) puf60b (ENSCLMG00005013607) scrib (ENSCLMG00005009548) cdv3 (ENSCLMG00005009485) ENSCLMG00005009484 topbp1 (ENSCLMG00005009412) DNAJC13 (ENSCLMG00005009383) lztfl1 (ENSCLMG00005009377) CCR9 (ENSCLMG00005009376) gli3 (ENSCLMG00005009375) #22 prpf4bb (ENSCLMG00005009339) PXDC1 (ENSCLMG00005009333) TMX3 (ENSCLMG00005008926) DSEL (ENSCLMG00005008918) ENSCLMG00005008912 CDH7 (ENSCLMG00005008087) ENSCLMG00005008076 IMPA1 (ENSCLMG00005008074) ENSCLMG00005008073 ENSCLMG00005008072 ENSCLMG00005008071 FBXL7 (ENSCLMG00005022882) zgc:111976 (ENSCLMG00005022881) ralaa (ENSCLMG00005022880) #28 ENSCLMG00005022878 #26 Stickleback MODERN SPECIES 20 ENSGACG00000004661 slc4a2b (ENSGACG00000004664) ENSGACG00000004690 ENSGACG00000004694 ENSGACG00000004701 ENSGACG00000004703 nrbp2b (ENSGACG00000004706) puf60b (ENSGACG00000004717) scrib (ENSGACG00000004725) KIF9 (ENSGACG00000004747) cdv3 (ENSGACG00000004751) topbp1 (ENSGACG00000004755) DNAJC13 (ENSGACG00000004764) lztfl1 (ENSGACG00000004804) CCR9 (ENSGACG00000004830) gli3 (ENSGACG00000004834) #22 prpf4bb (ENSGACG00000004845) PXDC1 (ENSGACG00000004852) TMX3 (ENSGACG00000004863) DSEL (ENSGACG00000004870) ENSGACG00000004873 CDH7 (ENSGACG00000004878) ENSGACG00000004882 IMPA1 (ENSGACG00000004905) ENSGACG00000004942 ENSGACG00000004949 FBXL7 (ENSGACG00000004953) zgc:111976 (ENSGACG00000004956) ralaa (ENSGACG00000004967) #28 ENSGACG00000004982 #26 ENSGACG00000004991 Perciformes ANCESTRAL SPECIES ENSGT00940000155925.w #22 Perciformes_a ANCESTRAL SPECIES ENSGT00940000155925.w #22 Channel bull blenny MODERN SPECIES 11 tmem198b (ENSCGOG00000008704) desmb (ENSCGOG00000008733) dnpep (ENSCGOG00000009207) si:ch211-114n24.6 (ENSCGOG00000010204) ENSCGOG00000010701 gbx2 (ENSCGOG00000010796) AGAP1 (ENSCGOG00000010834) faimb (ENSCGOG00000013310) ENSCGOG00000013312 INHBB (ENSCGOG00000013320) ENSCGOG00000013321 ENSCGOG00000013324 ENSCGOG00000013326 ENSCGOG00000013328 ENSCGOG00000013334 ENSCGOG00000013335 #22 ENSCGOG00000013345 GLI2 (ENSCGOG00000013349) ENSCGOG00000013362 Ovalentaria ANCESTRAL SPECIES 21 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Pomacentridae ANCESTRAL SPECIES 11 ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Amphiprion ANCESTRAL SPECIES 7 ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430.lb ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Clown anemonefish MODERN SPECIES 3555 cdv3 (ENSAOCG00000005585) ENSAOCG00000005556 topbp1 (ENSAOCG00000005530) DNAJC13 (ENSAOCG00000005108) lztfl1 (ENSAOCG00000003665) CCR9 (ENSAOCG00000003649) gli3 (ENSAOCG00000003640) #22 prpf4bb (ENSAOCG00000003626) PXDC1 (ENSAOCG00000003609) TMX3 (ENSAOCG00000003591) Orange clownfish MODERN SPECIES 14 ENSAPEG00000012112 slc4a2b (ENSAPEG00000012059) ENSAPEG00000012045 ENSAPEG00000012038 ENSAPEG00000012005 nrbp2b (ENSAPEG00000011981) puf60b (ENSAPEG00000011923) scrib (ENSAPEG00000011753) ENSAPEG00000011717 cdv3 (ENSAPEG00000011688) ENSAPEG00000011676 topbp1 (ENSAPEG00000011623) DNAJC13 (ENSAPEG00000011400) lztfl1 (ENSAPEG00000011355) CCR9 (ENSAPEG00000011346) gli3 (ENSAPEG00000011295) #22 prpf4bb (ENSAPEG00000011281) PXDC1 (ENSAPEG00000011245) TMX3 (ENSAPEG00000011181) ENSAPEG00000011157 DSEL (ENSAPEG00000011138) ENSAPEG00000011111 ENSAPEG00000010996 CDH7 (ENSAPEG00000010935) ENSAPEG00000010902 IMPA1 (ENSAPEG00000010891) ENSAPEG00000010849 ENSAPEG00000010811 FBXL7 (ENSAPEG00000010800) zgc:111976 (ENSAPEG00000010653) ralaa (ENSAPEG00000010634) #28 Bicolor damselfish MODERN SPECIES 1209 cdv3 (ENSSPAG00000008659) ENSSPAG00000008695 topbp1 (ENSSPAG00000008707) DNAJC13 (ENSSPAG00000008762) lztfl1 (ENSSPAG00000008888) CCR9 (ENSSPAG00000008920) gli3 (ENSSPAG00000008930) #22 Cichlidae ANCESTRAL SPECIES 18 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Midas cichlid MODERN SPECIES 147 ENSACIG00000021606 ENSACIG00000021610 ENSACIG00000021619 ENSACIG00000021630 ENSACIG00000021663 nrbp2b (ENSACIG00000021670) puf60b (ENSACIG00000021705) scrib (ENSACIG00000021725) cdv3 (ENSACIG00000021781) ENSACIG00000021803 topbp1 (ENSACIG00000021817) DNAJC13 (ENSACIG00000021872) lztfl1 (ENSACIG00000000163) CCR9 (ENSACIG00000000350) ENSACIG00000000357 gli3 (ENSACIG00000000367) #22 prpf4bb (ENSACIG00000000424) PXDC1 (ENSACIG00000000481) tmx3b (ENSACIG00000000495) DSEL (ENSACIG00000000556) ENSACIG00000000568 CDH7 (ENSACIG00000000711) ENSACIG00000000754 IMPA1 (ENSACIG00000000981) ENSACIG00000001004 ENSACIG00000001027 FBXL7 (ENSACIG00000001060) zgc:111976 (ENSACIG00000001094) ralaa (ENSACIG00000001178) #28 ENSACIG00000001208 #26 ENSACIG00000001335 Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00390000004989.a.b.bb ENSGT00390000004989.a.b.ab.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.y.a ENSGT00390000017291.a.e.y.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Nile tilapia MODERN SPECIES 7 ENSONIG00000007860 actr3 (ENSONIG00000007884) ddx18 (ENSONIG00000007887) zgc:172295 (ENSONIG00000007888) ENSONIG00000040916 nifk (ENSONIG00000042666) ENSONIG00000035475 arglu1 (ENSONIG00000034710) efnb2a (ENSONIG00000035334) ENSONIG00000041690 gtpbp8 (ENSONIG00000004479) ENSONIG00000036900 slc10a2 (ENSONIG00000028469) ENSONIG00000030774 inhbb (ENSONIG00000004476) ENSONIG00000004472 #22 ENSONIG00000036696 ENSONIG00000035432 tfcp2l1 (ENSONIG00000004467) clasp1a (ENSONIG00000004450) ENSONIG00000035419 ENSONIG00000032987 ENSONIG00000039076 ENSONIG00000004445 ugt1b1 (ENSONIG00000004437) NXPH2 (ENSONIG00000004436) spoplb (ENSONIG00000004430) HNMT (ENSONIG00000004429) hnmt (ENSONIG00000004424) THSD7B (ENSONIG00000004411) dars1 (ENSONIG00000004402) Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.y.a ENSGT00390000017291.a.e.z ENSGT00390000017291.a.e.y.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 325 ENSNBRG00000013242 ENSNBRG00000013234 ENSNBRG00000013226 ENSNBRG00000013211 ENSNBRG00000013204 ENSNBRG00000013181 nrbp2b (ENSNBRG00000013150) puf60b (ENSNBRG00000013047) scrib (ENSNBRG00000012941) cdv3 (ENSNBRG00000012920) ENSNBRG00000012917 topbp1 (ENSNBRG00000012862) ENSNBRG00000012857 lztfl1 (ENSNBRG00000012841) CCR9 (ENSNBRG00000012822) gli3 (ENSNBRG00000012786) #22 prpf4bb (ENSNBRG00000012727) PXDC1 (ENSNBRG00000012708) TMX3 (ENSNBRG00000012674) DSEL (ENSNBRG00000012662) ENSNBRG00000011895 CDH7 (ENSNBRG00000011764) ENSNBRG00000011742 IMPA1 (ENSNBRG00000011728) ENSNBRG00000011705 ENSNBRG00000011678 ENSNBRG00000011649 FBXL7 (ENSNBRG00000011640) zgc:111976 (ENSNBRG00000011547) ralaa (ENSNBRG00000011524) #28 ENSNBRG00000011413 #26 Lyretail cichlid MODERN SPECIES 350 ENSNBRG00000021306 ENSNBRG00000021295 ENSNBRG00000021259 ENSNBRG00000021245 ENSNBRG00000021228 ENSNBRG00000021220 ENSNBRG00000021202 ENSNBRG00000021191 gtdc1 (ENSNBRG00000021171) zeb2a (ENSNBRG00000021148) acvr2aa (ENSNBRG00000021123) kif5c (ENSNBRG00000021082) arhgap15 (ENSNBRG00000021025) slc10a2 (ENSNBRG00000021006) inhbb (ENSNBRG00000020940) ENSNBRG00000020903 #22 ENSNBRG00000020892 ENSNBRG00000020889 tfcp2l1 (ENSNBRG00000020822) clasp1a (ENSNBRG00000020720) ENSNBRG00000020701 ENSNBRG00000020432 ugt1b1 (ENSNBRG00000020375) NXPH2 (ENSNBRG00000020368) spoplb (ENSNBRG00000020337) ENSNBRG00000020316 hnmt (ENSNBRG00000020241) THSD7B (ENSNBRG00000020121) cxcr4a (ENSNBRG00000020093) dars1 (ENSNBRG00000020068) TMBIM1 (ENSNBRG00000020048) Haplochromini ANCESTRAL SPECIES 21 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.y.a ENSGT00390000017291.a.e.z ENSGT00390000017291.a.e.y.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb ENSGT00390000004989.a.b.ab.a ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000178137 ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.y.a ENSGT00390000017291.a.e.z ENSGT00390000017291.a.e.y.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 P. nyererei DUPLICATION P. nyererei MODERN SPECIES 382 ENSPNYG00000002424 ENSPNYG00000002429 ENSPNYG00000002438 ENSPNYG00000002454 ENSPNYG00000002464 nrbp2b (ENSPNYG00000002484) puf60b (ENSPNYG00000002556) scrib (ENSPNYG00000002638) cdv3 (ENSPNYG00000003201) ENSPNYG00000003204 topbp1 (ENSPNYG00000003212) DNAJC13 (ENSPNYG00000003230) lztfl1 (ENSPNYG00000003387) CCR9 (ENSPNYG00000003421) ENSPNYG00000003437 gli3 (ENSPNYG00000003454) #22 prpf4bb (ENSPNYG00000003501) PXDC1 (ENSPNYG00000003532) TMX3 (ENSPNYG00000003566) DSEL (ENSPNYG00000003589) ENSPNYG00000003595 CDH7 (ENSPNYG00000003618) ENSPNYG00000003652 ENSPNYG00000003675 IMPA1 (ENSPNYG00000003701) ENSPNYG00000003735 ENSPNYG00000003760 P. nyererei MODERN SPECIES 458 gtpbp8 (ENSPNYG00000016946) slc10a2 (ENSPNYG00000016934) ENSPNYG00000016913 inhbb (ENSPNYG00000016892) ENSPNYG00000016860 #22 ENSPNYG00000016829 tfcp2l1 (ENSPNYG00000016791) clasp1a (ENSPNYG00000016701) ENSPNYG00000016678 ENSPNYG00000016665 ugt1b1 (ENSPNYG00000016651) NXPH2 (ENSPNYG00000016633) spoplb (ENSPNYG00000016589) HNMT (ENSPNYG00000016568) hnmt (ENSPNYG00000016548) THSD7B (ENSPNYG00000016476) ENSPNYG00000016450 cxcr4a (ENSPNYG00000016443) dars1 (ENSPNYG00000016403) TMBIM1 (ENSPNYG00000016371) Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00400000024709.i ENSGT00400000024709.j.a.b ENSGT00400000024709.j.b ENSGT00400000024709.j.a.a ENSGT00390000004989.a.b.bb ENSGT00390000004989.a.b.ab.a ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e.y.a ENSGT00390000017291.a.e.z ENSGT00390000017291.a.e.y.b ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1112 ENSMZEG00005018472 ENSMZEG00005018479 ENSMZEG00005018485 ENSMZEG00005018496 ENSMZEG00005018499 ENSMZEG00005018500 nrbp2b (ENSMZEG00005018504) puf60b (ENSMZEG00005018515) scrib (ENSMZEG00005018534) cdv3 (ENSMZEG00005018542) ENSMZEG00005018547 topbp1 (ENSMZEG00005018553) DNAJC13 (ENSMZEG00005018568) lztfl1 (ENSMZEG00005018594) CCR9 (ENSMZEG00005018603) gli3 (ENSMZEG00005018607) #22 prpf4bb (ENSMZEG00005018622) PXDC1 (ENSMZEG00005018637) TMX3 (ENSMZEG00005018645) DSEL (ENSMZEG00005018655) ENSMZEG00005018661 CDH7 (ENSMZEG00005018669) ENSMZEG00005018674 IMPA1 (ENSMZEG00005018683) ENSMZEG00005018693 ENSMZEG00005018698 ENSMZEG00005018703 ENSMZEG00005018709 FBXL7 (ENSMZEG00005018717) zgc:111976 (ENSMZEG00005018725) ralaa (ENSMZEG00005018734) #28 Zebra mbuna MODERN SPECIES 1098 actr3 (ENSMZEG00005013235) ddx18 (ENSMZEG00005013189) zgc:172295 (ENSMZEG00005013155) ENSMZEG00005013132 nifk (ENSMZEG00005013057) arglu1a (ENSMZEG00005013034) efnb2a (ENSMZEG00005013024) ENSMZEG00005013008 gtpbp8 (ENSMZEG00005012995) slc10a2 (ENSMZEG00005012987) slc10a2 (ENSMZEG00005012959) slc10a2 (ENSMZEG00005012920) slc10a2 (ENSMZEG00005012894) ENSMZEG00005012879 inhbb (ENSMZEG00005012868) ENSMZEG00005012836 #22 ENSMZEG00005012821 tfcp2l1 (ENSMZEG00005012802) clasp1a (ENSMZEG00005012752) ENSMZEG00005012735 ENSMZEG00005012725 ugt1b1 (ENSMZEG00005012717) NXPH2 (ENSMZEG00005012710) spoplb (ENSMZEG00005012687) HNMT (ENSMZEG00005012675) hnmt (ENSMZEG00005012631) THSD7B (ENSMZEG00005012606) cxcr4a (ENSMZEG00005012580) dars1 (ENSMZEG00005012535) TMBIM1 (ENSMZEG00005012526) pnkd (ENSMZEG00005012514) Eastern happy DUPLICATION Eastern happy MODERN SPECIES 21 ENSACLG00000004235 ENSACLG00000004262 ENSACLG00000004273 ENSACLG00000004282 ENSACLG00000004296 ENSACLG00000004305 nrbp2b (ENSACLG00000004318) puf60b (ENSACLG00000004462) scrib (ENSACLG00000004557) cdv3 (ENSACLG00000004688) ENSACLG00000004721 topbp1 (ENSACLG00000004761) DNAJC13 (ENSACLG00000004879) lztfl1 (ENSACLG00000004958) CCR9 (ENSACLG00000005006) gli3 (ENSACLG00000005019) #22 prpf4bb (ENSACLG00000005056) PXDC1 (ENSACLG00000005082) TMX3 (ENSACLG00000005103) ENSACLG00000005491 DSEL (ENSACLG00000005500) ENSACLG00000005506 CDH7 (ENSACLG00000005876) ENSACLG00000005898 ENSACLG00000005909 ENSACLG00000005916 IMPA1 (ENSACLG00000005942) ENSACLG00000005976 ENSACLG00000006002 ENSACLG00000006022 ENSACLG00000006055 Eastern happy MODERN SPECIES 7 zgc:172295 (ENSACLG00000000277) ENSACLG00000000263 nifk (ENSACLG00000000228) actr3 (ENSACLG00000000154) arglu1a (ENSACLG00000000047) efnb2a (ENSACLG00000022904) ENSACLG00000022899 ENSACLG00000022861 ENSACLG00000022798 gtpbp8 (ENSACLG00000022779) ENSACLG00000022759 slc10a2 (ENSACLG00000022706) ENSACLG00000022671 ENSACLG00000022640 inhbb (ENSACLG00000022628) ENSACLG00000022539 #22 ENSACLG00000022501 tfcp2l1 (ENSACLG00000022460) clasp1a (ENSACLG00000022095) ENSACLG00000022066 ENSACLG00000022048 ugt1b1 (ENSACLG00000022037) NXPH2 (ENSACLG00000022030) spoplb (ENSACLG00000021964) ENSACLG00000021942 HNMT (ENSACLG00000021914) hnmt (ENSACLG00000021849) ENSACLG00000021834 THSD7B (ENSACLG00000021759) cxcr4a (ENSACLG00000021741) TMBIM1 (ENSACLG00000021718) Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 319 slc4a2b (ENSHBUG00000015231) ENSHBUG00000015172 ENSHBUG00000015169 ENSHBUG00000015164 ENSHBUG00000015152 ENSHBUG00000015149 nrbp2b (ENSHBUG00000000445) puf60b (ENSHBUG00000015118) scrib (ENSHBUG00000015025) cdv3 (ENSHBUG00000014911) ENSHBUG00000014879 topbp1 (ENSHBUG00000000437) DNAJC13 (ENSHBUG00000014823) lztfl1 (ENSHBUG00000014716) CCR9 (ENSHBUG00000014667) gli3 (ENSHBUG00000014660) #22 prpf4bb (ENSHBUG00000014598) PXDC1 (ENSHBUG00000014588) TMX3 (ENSHBUG00000001044) DSEL (ENSHBUG00000014558) ENSHBUG00000014531 CDH7 (ENSHBUG00000014487) ENSHBUG00000014462 IMPA1 (ENSHBUG00000014438) ENSHBUG00000014412 ENSHBUG00000014386 ENSHBUG00000014355 ENSHBUG00000014334 FBXL7 (ENSHBUG00000014304) zgc:111976 (ENSHBUG00000014297) ralaa (ENSHBUG00000014274) #28 Burton s mouthbrooder MODERN SPECIES 322 CPEB2 (ENSHBUG00000023297) C1QTNF7 (ENSHBUG00000023151) CC2D2A (ENSHBUG00000023125) fbxl5 (ENSHBUG00000000756) ENSHBUG00000022805 ENSHBUG00000022781 ENSHBUG00000022734 ENSHBUG00000022684 ENSHBUG00000022630 ENSHBUG00000022612 gbx2 (ENSHBUG00000022592) AGAP1 (ENSHBUG00000000693) faimb (ENSHBUG00000000690) ralbb (ENSHBUG00000000792) INHBB (ENSHBUG00000022433) ENSHBUG00000022420 #22 ENSHBUG00000022400 ENSHBUG00000022358 ENSHBUG00000022342 ENSHBUG00000022330 ENSHBUG00000022318 ENSHBUG00000022309 ENSHBUG00000022264 Burton s mouthbrooder MODERN SPECIES 298 ENSHBUG00000001200 ENSHBUG00000001201 ENSHBUG00000001202 ddx18 (ENSHBUG00000001204) zgc:172295 (ENSHBUG00000001205) ENSHBUG00000001206 nifk (ENSHBUG00000001209) arglu1a (ENSHBUG00000001211) efnb2a (ENSHBUG00000001212) ENSHBUG00000001213 gtpbp8 (ENSHBUG00000001214) slc10a2 (ENSHBUG00000001215) slc10a2 (ENSHBUG00000001216) ENSHBUG00000001217 inhbb (ENSHBUG00000001218) ENSHBUG00000001219 #22 ENSHBUG00000001220 tfcp2l1 (ENSHBUG00000000004) clasp1a (ENSHBUG00000001222) ENSHBUG00000001223 ENSHBUG00000001224 ugt1b1 (ENSHBUG00000001225) NXPH2 (ENSHBUG00000001226) spoplb (ENSHBUG00000001227) HNMT (ENSHBUG00000001228) hnmt (ENSHBUG00000001229) THSD7B (ENSHBUG00000001230) cxcr4a (ENSHBUG00000001231) dars1 (ENSHBUG00000001232) TMBIM1 (ENSHBUG00000001233) pnkd (ENSHBUG00000001234) Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Oryzias ANCESTRAL SPECIES 18 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Oryzias_b ANCESTRAL SPECIES 16 ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT01000000221249 ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Javanese ricefish MODERN SPECIES 12 smarcd3b (ENSOJAG00000009827) CHPF2 (ENSOJAG00000009760) abcf2a (ENSOJAG00000009751) ENSOJAG00000009694 ENSOJAG00000007873 ENSOJAG00000007863 ENSOJAG00000007822 nrbp2b (ENSOJAG00000007683) puf60b (ENSOJAG00000007188) ENSOJAG00000006995 cdv3 (ENSOJAG00000006983) ENSOJAG00000006957 topbp1 (ENSOJAG00000006279) lztfl1 (ENSOJAG00000006134) CCR9 (ENSOJAG00000006125) gli3 (ENSOJAG00000005821) #22 prpf4bb (ENSOJAG00000005313) PXDC1 (ENSOJAG00000005285) TMX3 (ENSOJAG00000004482) DSEL (ENSOJAG00000004293) ENSOJAG00000004272 CDH7 (ENSOJAG00000004037) ENSOJAG00000003920 ENSOJAG00000003900 ENSOJAG00000003842 FBXL7 (ENSOJAG00000003822) ralaa (ENSOJAG00000003789) #28 ENSOJAG00000003597 ENSOJAG00000003565 ENSOJAG00000003538 ca2 (ENSOJAG00000003514) Indian medaka MODERN SPECIES 14 ENSOMEG00000001734 slc4a2b (ENSOMEG00000001716) ENSOMEG00000001690 ENSOMEG00000001688 ENSOMEG00000001683 nrbp2b (ENSOMEG00000001675) puf60b (ENSOMEG00000001643) scrib (ENSOMEG00000001582) ENSOMEG00000001575 cdv3 (ENSOMEG00000001568) ENSOMEG00000001561 topbp1 (ENSOMEG00000001551) DNAJC13 (ENSOMEG00000001398) lztfl1 (ENSOMEG00000001260) CCR9 (ENSOMEG00000001256) gli3 (ENSOMEG00000001241) #22 prpf4bb (ENSOMEG00000001222) PXDC1 (ENSOMEG00000001218) TMX3 (ENSOMEG00000001215) ENSOMEG00000001210 ENSOMEG00000001206 DSEL (ENSOMEG00000001204) ENSOMEG00000001202 ENSOMEG00000001200 CDH7 (ENSOMEG00000001196) ENSOMEG00000001195 IMPA1 (ENSOMEG00000001192) ENSOMEG00000001190 ENSOMEG00000001189 FBXL7 (ENSOMEG00000001188) zgc:111976 (ENSOMEG00000001184) Oryzias_a ANCESTRAL SPECIES 16 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Japanese Medaka HdrR MODERN SPECIES 12 abcf2a (ENSORLG00000011822) ENSORLG00000027505 slc4a2b (ENSORLG00000012164) ENSORLG00000029077 ENSORLG00000012186 nrbp2b (ENSORLG00000012200) puf60b (ENSORLG00000012279) ENSORLG00000012302 cdv3 (ENSORLG00000012313) ENSORLG00000022317 ENSORLG00000027623 topbp1 (ENSORLG00000012344) DNAJC13 (ENSORLG00000012388) lztfl1 (ENSORLG00000012427) CCR9 (ENSORLG00000027812) gli3 (ENSORLG00000012490) #22 prpf4bb (ENSORLG00000012529) PXDC1 (ENSORLG00000030516) TMX3 (ENSORLG00000012557) ENSORLG00000026104 DSEL (ENSORLG00000012566) ENSORLG00000012613 CDH7 (ENSORLG00000012632) ENSORLG00000012644 ENSORLG00000012664 ENSORLG00000030203 ENSORLG00000029660 ENSORLG00000022217 ENSORLG00000012671 ENSORLG00000012675 FBXL7 (ENSORLG00000012685) Chinese medaka MODERN SPECIES 71 fam49bb (ENSOSIG00000016086) ASAP1 (ENSOSIG00000016540) NFX1 (ENSOSIG00000020368) smarcd3b (ENSOSIG00000020499) CHPF2 (ENSOSIG00000020619) slc4a2b (ENSOSIG00000020668) ENSOSIG00000021264 ENSOSIG00000021265 ENSOSIG00000021266 nrbp2b (ENSOSIG00000021289) ENSOSIG00000021677 ENSOSIG00000021936 topbp1 (ENSOSIG00000021984) lztfl1 (ENSOSIG00000022171) CCR9 (ENSOSIG00000022174) gli3 (ENSOSIG00000022232) #22 prpf4bb (ENSOSIG00000022278) PXDC1 (ENSOSIG00000022311) TMX3 (ENSOSIG00000022344) DSEL (ENSOSIG00000022466) Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b ENSGT00940000160430 ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000164239.b.b Mangrove rivulus MODERN SPECIES 7 ENSKMAG00000016498 slc4a2b (ENSKMAG00000016571) ENSKMAG00000016662 ENSKMAG00000016670 ENSKMAG00000016686 nrbp2b (ENSKMAG00000016702) ENSKMAG00000016728 puf60b (ENSKMAG00000016745) scrib (ENSKMAG00000016813) cdv3 (ENSKMAG00000016999) ENSKMAG00000017012 topbp1 (ENSKMAG00000017034) DNAJC13 (ENSKMAG00000017138) lztfl1 (ENSKMAG00000017481) CCR9 (ENSKMAG00000017561) gli3 (ENSKMAG00000017607) #22 prpf4bb (ENSKMAG00000017707) PXDC1 (ENSKMAG00000017737) TMX3 (ENSKMAG00000017790) DSEL (ENSKMAG00000017816) ENSKMAG00000017834 CDH7 (ENSKMAG00000017873) ENSKMAG00000017923 IMPA1 (ENSKMAG00000017940) ENSKMAG00000017984 ENSKMAG00000018025 ENSKMAG00000018059 FBXL7 (ENSKMAG00000018078) zgc:111976 (ENSKMAG00000018098) ralaa (ENSKMAG00000018128) #28 ENSKMAG00000018139 #26 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015008423 OLA.2605 (ENSNFUG00015008426) Nfu_g_1_006955 (ENSNFUG00015008429) ENSNFUG00015008431 Nfu_g_1_006903 (ENSNFUG00015008436) scrib (ENSNFUG00015008631) nrbp2b (ENSNFUG00015012791) ENSNFUG00015012842 CDV3 (ENSNFUG00015012846) ENSNFUG00015012852 TOPBP1 (ENSNFUG00015012861) DNAJC13 (ENSNFUG00015012962) lztfl1 (ENSNFUG00015013024) ENSNFUG00015013057 CCR9 (ENSNFUG00015013060) GLI3 (ENSNFUG00015013076) #22 puf60b (ENSNFUG00015013147) PRPF4BB (ENSNFUG00015014231) PXDC1B (ENSNFUG00015014754) CABZ01108997.2 (ENSNFUG00015014801) ENSNFUG00015015204 ENSNFUG00015015212 ENSNFUG00015015229 ENSNFUG00015015236 DSEL (ENSNFUG00015015248) ENSNFUG00015015262 ENSNFUG00015015280 IMPA1 (ENSNFUG00015015286) ENSNFUG00015015301 BST1 (ENSNFUG00015015308) ENSNFUG00015015321 Cyprinodontoidei ANCESTRAL SPECIES 27 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a ENSGT00940000155594.c.b ENSGT00940000160430 ENSGT00390000004989.a.b.x ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b NAME_4 ANCESTRAL SPECIES 192 ENSGT00940000154025.a ENSGT00940000155594.c.b ENSGT00940000160430 ENSGT00390000004989.a.b.x ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Mummichog MODERN SPECIES 309 cdv3 (ENSFHEG00000004844) ENSFHEG00000004861 topbp1 (ENSFHEG00000004923) ENSFHEG00000005056 lztfl1 (ENSFHEG00000005069) CCR9 (ENSFHEG00000005073) gli3 (ENSFHEG00000005106) #22 prpf4bb (ENSFHEG00000005170) PXDC1 (ENSFHEG00000005177) TMX3 (ENSFHEG00000005195) Sheepshead minnow MODERN SPECIES 237 CCR9 (ENSCVAG00000008483) gli3 (ENSCVAG00000008472) #22 ENSCVAG00000008460 prpf4bb (ENSCVAG00000008394) PXDC1 (ENSCVAG00000008383) TMX3 (ENSCVAG00000008363) ENSCVAG00000008345 DSEL (ENSCVAG00000008342) ENSCVAG00000008330 CDH7 (ENSCVAG00000008304) ENSCVAG00000008278 IMPA1 (ENSCVAG00000008230) ENSCVAG00000008215 ENSCVAG00000008208 ENSCVAG00000008153 ENSCVAG00000008147 ENSCVAG00000008137 Poeciliinae ANCESTRAL SPECIES 20 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a ENSGT00940000155594.c.b ENSGT00940000160430 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 ENSGT00940000156907.p.a.b Poecilia ANCESTRAL SPECIES 17 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.y ENSGT00940000154025.a ENSGT00940000155594.c.b ENSGT00940000160430 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 NAME_6 ANCESTRAL SPECIES 67 ENSGT00390000004989.a.b.y.b ENSGT00940000154025.a ENSGT00940000155594.c.b ENSGT00940000160430 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT01070000253760.b.a.a.a.a.b.b.e.a.a.b.a.a.a.a.a.a.a.a ENSGT00390000017582 ENSGT00390000016415 ENSGT01030000234667.a.a.b.e ENSGT00940000155925 #22 ENSGT00940000155562.l.b ENSGT00390000009209 ENSGT00930000151022.a ENSGT00390000006522.a.a ENSGT00940000166818 ENSGT00940000157031.k ENSGT00940000154634.d.a ENSGT00940000154634.c.lb.a ENSGT00390000017291.a.f ENSGT00390000017291.a.e ENSGT00760000120378 ENSGT00940000158009.a ENSGT00660000095569.c ENSGT00940000155142 #28 ENSGT00940000157852 #26 Sailfin molly DUPLICATION Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 2077 gli3 (ENSPLAG00000000673) #22 prpf4bb (ENSPLAG00000000510) Sailfin molly MODERN SPECIES 942 PTCHD1 (ENSPLAG00000023227) ENSPLAG00000023215 phex (ENSPLAG00000023196) mbtps2 (ENSPLAG00000023140) smpx (ENSPLAG00000023126) KLHL34 (ENSPLAG00000023113) ENSPLAG00000023098 DNAJC13 (ENSPLAG00000022805) lztfl1 (ENSPLAG00000016439) CCR9 (ENSPLAG00000016413) ENSPLAG00000000698 #22 Sailfin molly MODERN SPECIES 396 dph3 (ENSPLAG00000009140) pomca (ENSPLAG00000009124) gbx2 (ENSPLAG00000009111) AGAP1 (ENSPLAG00000009106) faimb (ENSPLAG00000009030) ENSPLAG00000008996 INHBB (ENSPLAG00000008988) ENSPLAG00000008979 #22 ENSPLAG00000008947 ENSPLAG00000008890 clcn4 (ENSPLAG00000000184) ENSPLAG00000008856 dnajc27 (ENSPLAG00000008845) ENSPLAG00000008821 XDH (ENSPLAG00000008793) tspan7b (ENSPLAG00000008677) mid1ip1b (ENSPLAG00000008599) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 434 ENSPFOG00000019191 scrib (ENSPFOG00000019196) puf60b (ENSPFOG00000019217) nrbp2b (ENSPFOG00000019225) cdv3 (ENSPFOG00000019234) ENSPFOG00000023956 topbp1 (ENSPFOG00000019240) ENSPFOG00000020567 ENSPFOG00000019248 DNAJC13 (ENSPFOG00000019268) lztfl1 (ENSPFOG00000019288) CCR9 (ENSPFOG00000020568) gli3 (ENSPFOG00000019294) #22 prpf4bb (ENSPFOG00000019305) PXDC1 (ENSPFOG00000019311) TMX3 (ENSPFOG00000019317) DSEL (ENSPFOG00000020569) ENSPFOG00000020570 DSEL (ENSPFOG00000020571) ENSPFOG00000019330 CDH7 (ENSPFOG00000019359) ENSPFOG00000019382 IMPA1 (ENSPFOG00000019384) ENSPFOG00000019389 ENSPFOG00000019391 ENSPFOG00000019394 ENSPFOG00000019397 FBXL7 (ENSPFOG00000019401) Amazon molly MODERN SPECIES 516 ENSPFOG00000024498 dph3 (ENSPFOG00000004226) pomca (ENSPFOG00000004254) gbx2 (ENSPFOG00000004268) AGAP1 (ENSPFOG00000004340) faimb (ENSPFOG00000004988) ENSPFOG00000005056 INHBB (ENSPFOG00000005088) ENSPFOG00000005116 #22 CLASP1 (ENSPFOG00000005373) clcn4 (ENSPFOG00000006075) ENSPFOG00000006206 ENSPFOG00000006222 ENSPFOG00000006324 dnajc27 (ENSPFOG00000006335) ENSPFOG00000006456 XDH (ENSPFOG00000006876) tspan7b (ENSPFOG00000007487) mid1ip1b (ENSPFOG00000020004)