Mammalia	ANCESTRAL SPECIES	15	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT00940000165811	ENSGT00940000167176	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Theria	ANCESTRAL SPECIES	19	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT00940000165811	ENSGT00940000167176	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Eutheria	ANCESTRAL SPECIES	11	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000171528	ENSGT00940000157009 #34	ENSGT00940000155769 #35
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.a.a ##25	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000171528
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.a.a ##25	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35
Primates	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Mouse lemur	MODERN SPECIES	9	PFDN4 (ENSMICG00000004651) #7	CYP24A1 (ENSMICG00000029179) #8	ENSMICG00000045708 #9	ZNF217 (ENSMICG00000009450) #10	BCAS1 (ENSMICG00000004635) #11	ENSMICG00000004645 #12	CBLN4 (ENSMICG00000026678) #13	ENSMICG00000043597 #14	ENSMICG00000040906 #15	FAM210B (ENSMICG00000047974) #16	AURKA (ENSMICG00000004643) #17	CSTF1 (ENSMICG00000004648) #18	CASS4 (ENSMICG00000004650) #19	RTF2 (ENSMICG00000034383) #20	GCNT7 (ENSMICG00000045498) #21	TFAP2C (ENSMICG00000030931) #22	BMP7 (ENSMICG00000005700) #23	SPO11 (ENSMICG00000000678) #24	RAE1 (ENSMICG00000005704) #25	RBM38 (ENSMICG00000038011) #26	ENSMICG00000043482 #27	PCK1 (ENSMICG00000043054) #28	ZBP1 (ENSMICG00000046613) #29	PMEPA1 (ENSMICG00000038326) #30	C20orf85 (ENSMICG00000035405) #31	ANKRD60 (ENSMICG00000001741) #32	ENSMICG00000030582 #33	ENSMICG00000008382 #34	VAPB (ENSMICG00000008389) #35	APCDD1L (ENSMICG00000008395) #36	STX16 (ENSMICG00000035104) #37
Lemuriformes_a	ANCESTRAL SPECIES	70	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Greater bamboo lemur	MODERN SPECIES	665						DOK5 (ENSPSMG00000023699)	CBLN4 (ENSPSMG00000023704) #13	MC3R (ENSPSMG00000023712)	FAM210B (ENSPSMG00000000105) #16	AURKA (ENSPSMG00000000225) #17	CSTF1 (ENSPSMG00000000272) #18	CASS4 (ENSPSMG00000000305) #19	RTF2 (ENSPSMG00000000441) #20	GCNT7 (ENSPSMG00000000506) #21	ENSPSMG00000000507	TFAP2C (ENSPSMG00000000517) #22	BMP7 (ENSPSMG00000000557) #23	SPO11 (ENSPSMG00000000622) #24	RAE1 (ENSPSMG00000000663) #25	RBM38 (ENSPSMG00000000690) #26	ENSPSMG00000000700 #27	PCK1 (ENSPSMG00000000719) #28	ENSPSMG00000000731 #29	PMEPA1 (ENSPSMG00000000761) #30
Coquerels sifaka	MODERN SPECIES	340	ENSPCOG00000010827 #9	ZNF217 (ENSPCOG00000000038) #10	BCAS1 (ENSPCOG00000021951) #11	CYP24A1 (ENSPCOG00000012205) #12	ENSPCOG00000018423 #7	DOK5 (ENSPCOG00000017168)	ENSPCOG00000026343	CBLN4 (ENSPCOG00000020998) #13	FAM210B (ENSPCOG00000022573) #16	AURKA (ENSPCOG00000015207) #17	CSTF1 (ENSPCOG00000020146) #18	CASS4 (ENSPCOG00000019485) #19	RTF2 (ENSPCOG00000005968) #20	GCNT7 (ENSPCOG00000020640) #21	ENSPCOG00000019821	TFAP2C (ENSPCOG00000007428) #22	BMP7 (ENSPCOG00000011212) #23	SPO11 (ENSPCOG00000022114) #24	ENSPCOG00000027779 #25	RBM38 (ENSPCOG00000026201) #26
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	138	ENSOGAG00000033043 #9	ZNF217 (ENSOGAG00000001685) #10	BCAS1 (ENSOGAG00000000952) #11	CYP24A1 (ENSOGAG00000016370) #12	PFDN4 (ENSOGAG00000016375) #7	DOK5 (ENSOGAG00000005109)	CBLN4 (ENSOGAG00000001413) #13	MC3R (ENSOGAG00000004439)	FAM210B (ENSOGAG00000004440) #16	ENSOGAG00000004441 #17	CSTF1 (ENSOGAG00000004442) #18	CASS4 (ENSOGAG00000034431) #19	RTF2 (ENSOGAG00000004444) #20	GCNT7 (ENSOGAG00000004446) #21	ENSOGAG00000028848	ENSOGAG00000033901 #22	BMP7 (ENSOGAG00000014634) #23	SPO11 (ENSOGAG00000014639) #24	RAE1 (ENSOGAG00000014649) #25	RBM38 (ENSOGAG00000029136) #26	CTCFL (ENSOGAG00000014657) #27	PCK1 (ENSOGAG00000014667) #28	ZBP1 (ENSOGAG00000014671) #29	PMEPA1 (ENSOGAG00000014675) #30	C20orf85 (ENSOGAG00000003886) #31	ANKRD60 (ENSOGAG00000003888) #32	RAB22A (ENSOGAG00000015779) #34	VAPB (ENSOGAG00000015783) #35	APCDD1L (ENSOGAG00000032345) #36	STX16 (ENSOGAG00000030186) #37	NPEPL1 (ENSOGAG00000005052)
Bushbaby	MODERN SPECIES	203	ENSOGAG00000012304	CDK20 (ENSOGAG00000008726)	SPIN1 (ENSOGAG00000002166)	NXNL2 (ENSOGAG00000002167)	S1PR3 (ENSOGAG00000011514)	SHC3 (ENSOGAG00000011519)	CKS2 (ENSOGAG00000028843)	SECISBP2 (ENSOGAG00000000317)	SEMA4D (ENSOGAG00000000321)	ENSOGAG00000032473	GADD45G (ENSOGAG00000002142)	ENSOGAG00000032500	DIRAS2 (ENSOGAG00000001184)	SYK (ENSOGAG00000011743)	AUH (ENSOGAG00000011749)	ENSOGAG00000032987 #22	NFIL3 (ENSOGAG00000011750)	ROR2 (ENSOGAG00000026382)	SPTLC1 (ENSOGAG00000014493)	ENSOGAG00000029819	CATSPERD (ENSOGAG00000011003)	LONP1 (ENSOGAG00000003930)	ENSOGAG00000027049	HSD11B1L (ENSOGAG00000024555)	MICOS13 (ENSOGAG00000026645)	SAFB (ENSOGAG00000027769)	SAFB2 (ENSOGAG00000006855)
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Tarsier	MODERN SPECIES	1695																TFAP2C (ENSTSYG00000036716) #22
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000159884 #10	ENSGT00940000154319.u.a	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00950000182905.b #12	ENSGT00940000160161	ENSGT00390000006865	ENSGT00940000153313.C.b	ENSGT00390000006696.vb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009.m.a #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Cebidae	DUPLICATION
Cebidae	ANCESTRAL SPECIES																	ENSGT00950000182848.c.b.a.b.q #22
Marmoset	MODERN SPECIES	17	AKAP3 (ENSCJAG00000002622)	ENSCJAG00000084558	ENSCJAG00000080357	ENSCJAG00000022488	DOK5 (ENSCJAG00000002600)	ENSCJAG00000079632	CBLN4 (ENSCJAG00000080243) #13	MC3R (ENSCJAG00000011249)	FAM210B (ENSCJAG00000041865) #16	AURKA (ENSCJAG00000011266) #17	ENSCJAG00000011281 #18	CASS4 (ENSCJAG00000011299) #19	RTF2 (ENSCJAG00000011308) #20	GCNT7 (ENSCJAG00000011336) #21	ENSCJAG00000011338	TFAP2C (ENSCJAG00000011343) #22	ENSCJAG00000078870	BMP7 (ENSCJAG00000019172) #23	SPO11 (ENSCJAG00000019147) #24	RBM38 (ENSCJAG00000019139) #26	CTCFL (ENSCJAG00000019109) #27	ENSCJAG00000065101	PCK1 (ENSCJAG00000042408) #28	ZBP1 (ENSCJAG00000019094) #29	PMEPA1 (ENSCJAG00000086391) #30	C20orf85 (ENSCJAG00000019072) #31	ANKRD60 (ENSCJAG00000075054) #32	RAB22A (ENSCJAG00000044464) #34	VAPB (ENSCJAG00000082702) #35	APCDD1L (ENSCJAG00000019021) #36	STX16 (ENSCJAG00000018995) #37
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00950000182848.c.b.a.b.q #22
Bolivian squirrel monkey	MODERN SPECIES	52													FLRT2 (ENSSBOG00000008964)	ENSSBOG00000026702	SEL1L (ENSSBOG00000004001)	ENSSBOG00000028494 #22	STON2 (ENSSBOG00000033919)	GTF2A1 (ENSSBOG00000024174)	ENSSBOG00000033932	TSHR (ENSSBOG00000024170)	CEP128 (ENSSBOG00000022900)	ENSSBOG00000028195	ENSSBOG00000034789	ENSSBOG00000032459	NRXN3 (ENSSBOG00000009699)	ADCK1 (ENSSBOG00000031769)	ENSSBOG00000026452	ENSSBOG00000024915	SLIRP (ENSSBOG00000020014)	ALKBH1 (ENSSBOG00000014817)	SPTLC2 (ENSSBOG00000029378)
Cebidae	ANCESTRAL SPECIES	13	ENSGT00950000182905.b #12	ENSGT00940000160161	ENSGT00390000006865	ENSGT00940000153313.C.b	ENSGT00390000006696.vb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b.r #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009.m.a #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00950000182905.b #12	ENSGT00940000160161	ENSGT00390000006865	ENSGT00940000153313.C.b	ENSGT00390000006696.vb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b.r #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009.m.a #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Capuchin	MODERN SPECIES	99	ST3GAL5 (ENSCCAG00000031165)	NDUFA9 (ENSCCAG00000026763)	AKAP3 (ENSCCAG00000023272)	ENSCCAG00000026393 #7	DOK5 (ENSCCAG00000030738)	CBLN4 (ENSCCAG00000029551) #13	MC3R (ENSCCAG00000013742)	FAM210B (ENSCCAG00000029562) #16	AURKA (ENSCCAG00000022095) #17	CSTF1 (ENSCCAG00000030350) #18	ENSCCAG00000014975	CASS4 (ENSCCAG00000016222) #19	GCNT7 (ENSCCAG00000010825) #21	RTF2 (ENSCCAG00000030126) #20	ENSCCAG00000029975	TFAP2C (ENSCCAG00000019946) #22	BMP7 (ENSCCAG00000022185) #23	SPO11 (ENSCCAG00000022540) #24	RAE1 (ENSCCAG00000022835) #25	RBM38 (ENSCCAG00000036872) #26	CTCFL (ENSCCAG00000026632) #27	PCK1 (ENSCCAG00000036283) #28	ZBP1 (ENSCCAG00000009469) #29	PMEPA1 (ENSCCAG00000027264) #30	C20orf85 (ENSCCAG00000033030) #31	ANKRD60 (ENSCCAG00000023622) #32	ENSCCAG00000025616 #33	RAB22A (ENSCCAG00000030930) #34	VAPB (ENSCCAG00000025285) #35	APCDD1L (ENSCCAG00000022173) #36	STX16 (ENSCCAG00000020294) #37
Bolivian squirrel monkey	MODERN SPECIES	93	CYP24A1 (ENSSBOG00000033981) #12	GALNT8 (ENSSBOG00000023511)	NDUFA9 (ENSSBOG00000023634)	ENSSBOG00000027064	ENSSBOG00000032651 #7	DOK5 (ENSSBOG00000034460)	CBLN4 (ENSSBOG00000027027) #13	MC3R (ENSSBOG00000011355)	FAM210B (ENSSBOG00000024853) #16	AURKA (ENSSBOG00000007729) #17	CSTF1 (ENSSBOG00000024921) #18	CASS4 (ENSSBOG00000030702) #19	RTF2 (ENSSBOG00000032473) #20	GCNT7 (ENSSBOG00000025565) #21	ENSSBOG00000026573	ENSSBOG00000028726 #22	ENSSBOG00000019282	ENSSBOG00000030411	BMP7 (ENSSBOG00000029401) #23	SPO11 (ENSSBOG00000032033) #24	RAE1 (ENSSBOG00000027737) #25	RBM38 (ENSSBOG00000031053) #26	CTCFL (ENSSBOG00000029240) #27	PCK1 (ENSSBOG00000020912) #28	ZBP1 (ENSSBOG00000032730) #29	PMEPA1 (ENSSBOG00000018423) #30	C20orf85 (ENSSBOG00000032942) #31	ANKRD60 (ENSSBOG00000026461) #32	ENSSBOG00000030417 #33	ENSSBOG00000033720	ENSSBOG00000030326
Mas night monkey	MODERN SPECIES	1347	ENSANAG00000036769 #10	ENSANAG00000028551	BCAS1 (ENSANAG00000019184) #11	CYP24A1 (ENSANAG00000028217) #12	NDUFA9 (ENSANAG00000036928)	AKAP3 (ENSANAG00000029990)	DOK5 (ENSANAG00000016760)	CBLN4 (ENSANAG00000027031) #13	MC3R (ENSANAG00000006077)	FAM210B (ENSANAG00000035348) #16	ENSANAG00000038011 #17	CSTF1 (ENSANAG00000033317) #18	CASS4 (ENSANAG00000030932) #19	RTF2 (ENSANAG00000028030) #20	GCNT7 (ENSANAG00000038307) #21	TFAP2C (ENSANAG00000038475) #22	BMP7 (ENSANAG00000036616) #23	SPO11 (ENSANAG00000034371) #24	RAE1 (ENSANAG00000030498) #25	RBM38 (ENSANAG00000031959) #26	CTCFL (ENSANAG00000024428) #27	PCK1 (ENSANAG00000023372) #28	ZBP1 (ENSANAG00000038003) #29	ENSANAG00000037500 #30	C20orf85 (ENSANAG00000022786) #31	ANKRD60 (ENSANAG00000037028) #32	ENSANAG00000033024 #33	ENSANAG00000034725 #34	VAPB (ENSANAG00000029884) #35	APCDD1L (ENSANAG00000030163) #36	STX16 (ENSANAG00000026627) #37
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000159884 #10	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Hominoidea	ANCESTRAL SPECIES	17	ENSGT01090000260115	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.b	ENSGT00390000005057.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.b	ENSGT00390000005057.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.b	ENSGT00390000005057.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00950000183120.e.b.b.b	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.b	ENSGT00390000005057.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00950000183120.e.b.b.b	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Pan	ANCESTRAL SPECIES	15	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00900000143204.a	ENSGT00940000159728 #13	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.b	ENSGT00390000005057.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00950000183120.e.b.b.b	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	11	BCAS1 (ENSPTRG00000013638) #11	CYP24A1 (ENSPTRG00000013640) #12	PFDN4 (ENSPTRG00000013641) #7	DOK5 (ENSPTRG00000013642)	ENSPTRG00000048333	ENSPTRG00000044637	ENSPTRG00000050041	CBLN4 (ENSPTRG00000013643) #13	FAM210B (ENSPTRG00000013645) #16	AURKA (ENSPTRG00000013646) #17	CSTF1 (ENSPTRG00000013647) #18	CASS4 (ENSPTRG00000013648) #19	RTF2 (ENSPTRG00000013649) #20	FAM209A (ENSPTRG00000034022)	FAM209B (ENSPTRG00000013652)	TFAP2C (ENSPTRG00000013654) #22	BMP7 (ENSPTRG00000013656) #23	SPO11 (ENSPTRG00000013657) #24	RAE1 (ENSPTRG00000013658) #25	MTRNR2L3 (ENSPTRG00000041872)	RBM38 (ENSPTRG00000013661) #26	HMGB1P1 (ENSPTRG00000044893)	CTCFL (ENSPTRG00000013663) #27	PCK1 (ENSPTRG00000013664) #28	ZBP1 (ENSPTRG00000013665) #29	PMEPA1 (ENSPTRG00000042931) #30	C20H20orf85 (ENSPTRG00000013667) #31	ANKRD60 (ENSPTRG00000013668) #32	ENSPTRG00000013670 #33	RAB22A (ENSPTRG00000044969) #34	VAPB (ENSPTRG00000013672) #35
Chimpanzee	MODERN SPECIES	16	COMMD2 (ENSPTRG00000015520)	WWTR1 (ENSPTRG00000015519)	TM4SF4 (ENSPTRG00000015517)	ENSPTRG00000050621	TM4SF1 (ENSPTRG00000015516)	TM4SF18 (ENSPTRG00000015515)	CP (ENSPTRG00000015513)	HPS3 (ENSPTRG00000015512)	HLTF (ENSPTRG00000015511)	GYG1 (ENSPTRG00000015509)	CPA3 (ENSPTRG00000015507)	CPB1 (ENSPTRG00000015505)	AGTR1 (ENSPTRG00000015503)	ZIC1 (ENSPTRG00000044837)	ZIC4 (ENSPTRG00000015500)	ENSPTRG00000050021 #22	PLSCR5 (ENSPTRG00000041967)	PLSCR1 (ENSPTRG00000015499)	PLSCR2 (ENSPTRG00000015498)	PLSCR4 (ENSPTRG00000015497)	PLOD2 (ENSPTRG00000015494)	ENSPTRG00000049155	ENSPTRG00000051252	DIPK2A (ENSPTRG00000015492)	ENSPTRG00000046723	SLC9A9 (ENSPTRG00000015491)	CHST2 (ENSPTRG00000043559)	U2SURP (ENSPTRG00000015489)	PAQR9 (ENSPTRG00000015488)	PCOLCE2 (ENSPTRG00000015486)	TRPC1 (ENSPTRG00000015485)
Bonobo	MODERN SPECIES	11	BCAS1 (ENSPPAG00000036066) #11	CYP24A1 (ENSPPAG00000038708) #12	PFDN4 (ENSPPAG00000041414) #7	DOK5 (ENSPPAG00000041888)	ENSPPAG00000026181	ENSPPAG00000029138	CBLN4 (ENSPPAG00000029475) #13	ENSPPAG00000030559 #16	AURKA (ENSPPAG00000031434) #17	CSTF1 (ENSPPAG00000037866) #18	CASS4 (ENSPPAG00000000925) #19	RTF2 (ENSPPAG00000026702) #20	ENSPPAG00000031674 #21	FAM209A (ENSPPAG00000032658)	FAM209B (ENSPPAG00000031375)	TFAP2C (ENSPPAG00000031621) #22	BMP7 (ENSPPAG00000032623) #23	SPO11 (ENSPPAG00000036133) #24	RAE1 (ENSPPAG00000037209) #25	ENSPPAG00000032947	ENSPPAG00000027757 #26	HMGB1P1 (ENSPPAG00000028336)	CTCFL (ENSPPAG00000031741) #27	PCK1 (ENSPPAG00000037672) #28	ZBP1 (ENSPPAG00000037949) #29	PMEPA1 (ENSPPAG00000040136) #30	C20orf85 (ENSPPAG00000018535) #31	ANKRD60 (ENSPPAG00000024429) #32	ENSPPAG00000027420 #33	RAB22A (ENSPPAG00000030833) #34	VAPB (ENSPPAG00000034492) #35
Human	MODERN SPECIES	12	ZNF217 (ENSG00000171940) #10	BCAS1 (ENSG00000064787) #11	CYP24A1 (ENSG00000019186) #12	PFDN4 (ENSG00000101132) #7	DOK5 (ENSG00000101134)	CBLN4 (ENSG00000054803) #13	MC3R (ENSG00000124089)	FAM210B (ENSG00000124098) #16	AURKA (ENSG00000087586) #17	CSTF1 (ENSG00000101138) #18	CASS4 (ENSG00000087589) #19	RTF2 (ENSG00000022277) #20	GCNT7 (ENSG00000124091) #21	FAM209A (ENSG00000124103)	FAM209B (ENSG00000213714)	TFAP2C (ENSG00000087510) #22	BMP7 (ENSG00000101144) #23	SPO11 (ENSG00000054796) #24	RAE1 (ENSG00000101146) #25	RBM38 (ENSG00000132819) #26	HMGB1P1 (ENSG00000124097)	CTCFL (ENSG00000124092) #27	PCK1 (ENSG00000124253) #28	ZBP1 (ENSG00000124256) #29	PMEPA1 (ENSG00000124225) #30	C20orf85 (ENSG00000124237) #31	ANKRD60 (ENSG00000124227) #32	RAB22A (ENSG00000124209) #34	VAPB (ENSG00000124164) #35	APCDD1L (ENSG00000198768) #36	STX16 (ENSG00000124222) #37
Gorilla	MODERN SPECIES	11	BCAS1 (ENSGGOG00000001286) #11	CYP24A1 (ENSGGOG00000009673) #12	PFDN4 (ENSGGOG00000027337) #7	DOK5 (ENSGGOG00000002089)	ENSGGOG00000042206	ENSGGOG00000038418	CBLN4 (ENSGGOG00000010488) #13	MC3R (ENSGGOG00000028519)	FAM210B (ENSGGOG00000043075) #16	AURKA (ENSGGOG00000007197) #17	CSTF1 (ENSGGOG00000007205) #18	CASS4 (ENSGGOG00000004217) #19	RTF2 (ENSGGOG00000004223) #20	ENSGGOG00000023300 #21	FAM209A (ENSGGOG00000038147)	TFAP2C (ENSGGOG00000000420) #22	BMP7 (ENSGGOG00000003803) #23	SPO11 (ENSGGOG00000008846) #24	ENSGGOG00000007789 #25	ENSGGOG00000007795 #26	HMGB1P1 (ENSGGOG00000007804)	CTCFL (ENSGGOG00000005761) #27	PCK1 (ENSGGOG00000010993) #28	ZBP1 (ENSGGOG00000011001) #29	PMEPA1 (ENSGGOG00000013821) #30	C20orf85 (ENSGGOG00000005869) #31	ANKRD60 (ENSGGOG00000015521) #32	ENSGGOG00000015523 #33	RAB22A (ENSGGOG00000015533) #34	VAPB (ENSGGOG00000007802) #35	APCDD1L (ENSGGOG00000007809) #36
Orangutan	MODERN SPECIES	11	ENSPPYG00000037756 #9	ZNF217 (ENSPPYG00000011140) #10	BCAS1 (ENSPPYG00000011142) #11	CYP24A1 (ENSPPYG00000011143) #12	ENSPPYG00000025840 #7	DOK5 (ENSPPYG00000011144)	CBLN4 (ENSPPYG00000011145) #13	MC3R (ENSPPYG00000011146)	FAM210B (ENSPPYG00000011147) #16	AURKA (ENSPPYG00000011148) #17	CSTF1 (ENSPPYG00000011149) #18	CASS4 (ENSPPYG00000011150) #19	RTF2 (ENSPPYG00000011151) #20	ENSPPYG00000011152 #21	ENSPPYG00000033583	TFAP2C (ENSPPYG00000011156) #22	BMP7 (ENSPPYG00000011157) #23	SPO11 (ENSPPYG00000011158) #24	RAE1 (ENSPPYG00000011159) #25	ENSPPYG00000033953	RBM38 (ENSPPYG00000041798) #26	CTCFL (ENSPPYG00000011163) #27	PCK1 (ENSPPYG00000011164) #28	ZBP1 (ENSPPYG00000011165) #29	PMEPA1 (ENSPPYG00000041071) #30	C20orf85 (ENSPPYG00000031029) #31	ANKRD60 (ENSPPYG00000011169) #32	ENSPPYG00000011170 #33	ENSPPYG00000011171 #34	VAPB (ENSPPYG00000011172) #35	APCDD1L (ENSPPYG00000011173) #36
Gibbon	MODERN SPECIES	3	ZNF217 (ENSNLEG00000007017) #10	ENSNLEG00000013615	ENSNLEG00000007019 #11	CYP24A1 (ENSNLEG00000007020) #12	PFDN4 (ENSNLEG00000007023) #7	DOK5 (ENSNLEG00000007024)	CBLN4 (ENSNLEG00000007027) #13	MC3R (ENSNLEG00000019230)	ENSNLEG00000007028 #16	AURKA (ENSNLEG00000007029) #17	CSTF1 (ENSNLEG00000007034) #18	CASS4 (ENSNLEG00000007036) #19	ENSNLEG00000028915 #21	RTF2 (ENSNLEG00000007037) #20	FAM209A (ENSNLEG00000007041)	TFAP2C (ENSNLEG00000007042) #22	ENSNLEG00000007045	BMP7 (ENSNLEG00000007046) #23	SPO11 (ENSNLEG00000007051) #24	RAE1 (ENSNLEG00000007055) #25	ENSNLEG00000007061 #26	ENSNLEG00000028818	CTCFL (ENSNLEG00000007062) #27	PCK1 (ENSNLEG00000007068) #28	ZBP1 (ENSNLEG00000007069) #29	PMEPA1 (ENSNLEG00000007072) #30	C20orf85 (ENSNLEG00000007074) #31	ENSNLEG00000035074 #32	ENSNLEG00000009347 #34	ENSNLEG00000028839	VAPB (ENSNLEG00000009351) #35
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000158489.d.b.a #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Rhinopithecus	ANCESTRAL SPECIES	13															ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.d.b.a #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT00910000148525
Black snub-nosed monkey	MODERN SPECIES	1558															ENSRBIG00000038583	TFAP2C (ENSRBIG00000043510) #22	BMP7 (ENSRBIG00000044683) #23	SPO11 (ENSRBIG00000031737) #24	RAE1 (ENSRBIG00000031999) #25	RBM38 (ENSRBIG00000044733) #26	CTCFL (ENSRBIG00000029045) #27	PCK1 (ENSRBIG00000032811) #28	ZBP1 (ENSRBIG00000044740) #29	PMEPA1 (ENSRBIG00000022470) #30	ENSRBIG00000024413	C20orf85 (ENSRBIG00000028830) #31	ANKRD60 (ENSRBIG00000041903) #32	ENSRBIG00000036034 #33	RAB22A (ENSRBIG00000037689) #34	VAPB (ENSRBIG00000043058) #35	EIF4G3 (ENSRBIG00000036003)
Golden snub-nosed monkey	MODERN SPECIES	1209																TFAP2C (ENSRROG00000040883) #22	ENSRROG00000012900	BMP7 (ENSRROG00000008373) #23	SPO11 (ENSRROG00000039862) #24	RAE1 (ENSRROG00000044550) #25	ENSRROG00000034125 #26	CTCFL (ENSRROG00000032938) #27	PCK1 (ENSRROG00000040117) #28	ZBP1 (ENSRROG00000038526) #29	PMEPA1 (ENSRROG00000033199) #30	ENSRROG00000042357	C20orf85 (ENSRROG00000025741) #31	ANKRD60 (ENSRROG00000044987) #32	ENSRROG00000038763 #33	RAB22A (ENSRROG00000043562) #34	VAPB (ENSRROG00000035212) #35
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT00910000148525
Vervet Monkey	MODERN SPECIES	11	ENSCSAG00000018742	BCAS1 (ENSCSAG00000015313) #11	CYP24A1 (ENSCSAG00000015320) #12	PFDN4 (ENSCSAG00000015325) #7	DOK5 (ENSCSAG00000015329)	CBLN4 (ENSCSAG00000015334) #13	MC3R (ENSCSAG00000018741)	FAM210B (ENSCSAG00000015346) #16	AURKA (ENSCSAG00000015393) #17	CSTF1 (ENSCSAG00000015411) #18	CASS4 (ENSCSAG00000015418) #19	GCNT7 (ENSCSAG00000015423) #21	RTF2 (ENSCSAG00000015426) #20	ENSCSAG00000015434	ENSCSAG00000015439	TFAP2C (ENSCSAG00000015443) #22	BMP7 (ENSCSAG00000015448) #23	SPO11 (ENSCSAG00000015473) #24	ENSCSAG00000018740	RAE1 (ENSCSAG00000015487) #25	RBM38 (ENSCSAG00000015503) #26	PCK1 (ENSCSAG00000015512) #28	PMEPA1 (ENSCSAG00000015515) #30	C20orf85 (ENSCSAG00000015520) #31	ANKRD60 (ENSCSAG00000015527) #32	ENSCSAG00000015540 #33	RAB22A (ENSCSAG00000015545) #34	VAPB (ENSCSAG00000015551) #35	APCDD1L (ENSCSAG00000015555) #36	STX16 (ENSCSAG00000015564) #37	NPEPL1 (ENSCSAG00000015570)
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT00910000148525
Macaca	ANCESTRAL SPECIES	16	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Pig-tailed macaque	MODERN SPECIES	462	ENSMNEG00000028135 #9	ZNF217 (ENSMNEG00000029796) #10	BCAS1 (ENSMNEG00000039962) #11	CYP24A1 (ENSMNEG00000039138) #12	PFDN4 (ENSMNEG00000028087) #7	DOK5 (ENSMNEG00000005921)	CBLN4 (ENSMNEG00000028083) #13	FAM210B (ENSMNEG00000031940) #16	AURKA (ENSMNEG00000020907) #17	CSTF1 (ENSMNEG00000028759) #18	CASS4 (ENSMNEG00000041494) #19	GCNT7 (ENSMNEG00000042982) #21	RTF2 (ENSMNEG00000002223) #20	ENSMNEG00000031630	ENSMNEG00000041000	TFAP2C (ENSMNEG00000041419) #22	BMP7 (ENSMNEG00000007460) #23	SPO11 (ENSMNEG00000040588) #24	RAE1 (ENSMNEG00000043504) #25	RBM38 (ENSMNEG00000034683) #26	CTCFL (ENSMNEG00000040577) #27	PCK1 (ENSMNEG00000039000) #28	ZBP1 (ENSMNEG00000043957) #29	PMEPA1 (ENSMNEG00000042458) #30	C20orf85 (ENSMNEG00000040608) #31	ANKRD60 (ENSMNEG00000038533) #32	ENSMNEG00000043895 #33	RAB22A (ENSMNEG00000028401) #34	VAPB (ENSMNEG00000041751) #35	APCDD1L (ENSMNEG00000045336) #36	STX16 (ENSMNEG00000044446) #37
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.b.b.a.b	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.b.b.a	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Rhesus	MODERN SPECIES	1	CYP24A1 (ENSMMUG00000014860) #12	PFDN4 (ENSMMUG00000017300) #7	DOK5 (ENSMMUG00000007090)	ENSMMUG00000053508	ENSMMUG00000056122	CBLN4 (ENSMMUG00000006005) #13	MC3R (ENSMMUG00000051905)	FAM210B (ENSMMUG00000061353) #16	AURKA (ENSMMUG00000000070) #17	CSTF1 (ENSMMUG00000000072) #18	CASS4 (ENSMMUG00000000073) #19	RTF2 (ENSMMUG00000000074) #20	GCNT7 (ENSMMUG00000062215) #21	ENSMMUG00000046647	ENSMMUG00000000079	TFAP2C (ENSMMUG00000009364) #22	BMP7 (ENSMMUG00000004074) #23	SPO11 (ENSMMUG00000050707) #24	RAE1 (ENSMMUG00000000252) #25	RBM38 (ENSMMUG00000031391) #26	ENSMMUG00000050216	CTCFL (ENSMMUG00000016802) #27	PCK1 (ENSMMUG00000022586) #28	ZBP1 (ENSMMUG00000022588) #29	PMEPA1 (ENSMMUG00000022589) #30	C10H20orf85 (ENSMMUG00000057227) #31	ANKRD60 (ENSMMUG00000019946) #32	ENSMMUG00000019944 #33	RAB22A (ENSMMUG00000000125) #34	VAPB (ENSMMUG00000063760) #35	APCDD1L (ENSMMUG00000015528) #36
Crab-eating macaque	MODERN SPECIES	1	CYP24A1 (ENSMFAG00000046397) #12	PFDN4 (ENSMFAG00000002174) #7	DOK5 (ENSMFAG00000032194)	ENSMFAG00000062425	CBLN4 (ENSMFAG00000058053) #13	MC3R (ENSMFAG00000062266)	ENSMFAG00000047548	FAM210B (ENSMFAG00000056763) #16	AURKA (ENSMFAG00000001851) #17	CSTF1 (ENSMFAG00000003531) #18	CASS4 (ENSMFAG00000045759) #19	RTF2 (ENSMFAG00000002272) #20	GCNT7 (ENSMFAG00000042446) #21	ENSMFAG00000035848	ENSMFAG00000046392	TFAP2C (ENSMFAG00000004040) #22	BMP7 (ENSMFAG00000032242) #23	SPO11 (ENSMFAG00000031364) #24	RAE1 (ENSMFAG00000043344) #25	RBM38 (ENSMFAG00000043808) #26	ENSMFAG00000061711	CTCFL (ENSMFAG00000037641) #27	PCK1 (ENSMFAG00000043755) #28	ZBP1 (ENSMFAG00000030920) #29	PMEPA1 (ENSMFAG00000049340) #30	ENSMFAG00000059914	C20orf85 (ENSMFAG00000032352) #31	ANKRD60 (ENSMFAG00000003716) #32	ENSMFAG00000028505 #33	RAB22A (ENSMFAG00000044247) #34	VAPB (ENSMFAG00000034610) #35
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.d	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT00910000148525
Cercopithecinae_d	ANCESTRAL SPECIES	47	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT00940000156134.e #16	ENSGT00940000154900.e #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.d	ENSGT00910000147689	ENSGT00390000005057.c	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489.c #26	ENSGT00940000158489.d.b.a #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Sooty mangabey	MODERN SPECIES	648	ENSCATG00000015802	BCAS1 (ENSCATG00000031760) #11	CYP24A1 (ENSCATG00000043442) #12	PFDN4 (ENSCATG00000042568) #7	DOK5 (ENSCATG00000029158)	CBLN4 (ENSCATG00000036053) #13	FAM210B (ENSCATG00000039274) #16	ENSCATG00000033256 #17	CSTF1 (ENSCATG00000031885) #18	CASS4 (ENSCATG00000033801) #19	GCNT7 (ENSCATG00000013240) #21	RTF2 (ENSCATG00000039310) #20	ENSCATG00000021152	ENSCATG00000031399	ENSCATG00000021733	TFAP2C (ENSCATG00000043757) #22	BMP7 (ENSCATG00000005904) #23	SPO11 (ENSCATG00000041938) #24	RAE1 (ENSCATG00000029401) #25	RBM38 (ENSCATG00000032133) #26	CTCFL (ENSCATG00000042235) #27	PCK1 (ENSCATG00000021561) #28	ZBP1 (ENSCATG00000013143) #29	PMEPA1 (ENSCATG00000029987) #30	C20orf85 (ENSCATG00000037657) #31	ANKRD60 (ENSCATG00000030519) #32	ENSCATG00000034770 #33	RAB22A (ENSCATG00000011350) #34	VAPB (ENSCATG00000020776) #35	APCDD1L (ENSCATG00000038687) #36	ENSCATG00000029929
Drill	MODERN SPECIES	711	ZNF217 (ENSMLEG00000028314) #10	BCAS1 (ENSMLEG00000028154) #11	CYP24A1 (ENSMLEG00000038601) #12	PFDN4 (ENSMLEG00000042229) #7	DOK5 (ENSMLEG00000035038)	CBLN4 (ENSMLEG00000018831) #13	FAM210B (ENSMLEG00000036070) #16	AURKA (ENSMLEG00000003588) #17	CSTF1 (ENSMLEG00000016128) #18	CASS4 (ENSMLEG00000037604) #19	RTF2 (ENSMLEG00000036789) #20	GCNT7 (ENSMLEG00000031478) #21	ENSMLEG00000025747	ENSMLEG00000013626	ENSMLEG00000043662	TFAP2C (ENSMLEG00000030578) #22	ENSMLEG00000042018 #23	SPO11 (ENSMLEG00000043384) #24	RAE1 (ENSMLEG00000037014) #25	ENSMLEG00000027505 #26	CTCFL (ENSMLEG00000030367) #27	PCK1 (ENSMLEG00000043825) #28	ZBP1 (ENSMLEG00000031509) #29	PMEPA1 (ENSMLEG00000037464) #30	ENSMLEG00000018088	C20orf85 (ENSMLEG00000030065) #31	ANKRD60 (ENSMLEG00000043974) #32	ENSMLEG00000038522 #33	RAB22A (ENSMLEG00000035868) #34	ENSMLEG00000031647 #35
Olive baboon	MODERN SPECIES	7	DOK5 (ENSPANG00000021794)	ENSPANG00000046400	CBLN4 (ENSPANG00000049128) #13	MC3R (ENSPANG00000043329)	FAM210B (ENSPANG00000040473) #16	AURKA (ENSPANG00000021795) #17	CSTF1 (ENSPANG00000020917) #18	CASS4 (ENSPANG00000020918) #19	RTF2 (ENSPANG00000018566) #20	GCNT7 (ENSPANG00000022758) #21	ENSPANG00000032241	ENSPANG00000023210	ENSPANG00000037577	ENSPANG00000030727	ENSPANG00000047957	TFAP2C (ENSPANG00000024505) #22	BMP7 (ENSPANG00000024504) #23	SPO11 (ENSPANG00000024503) #24	RAE1 (ENSPANG00000024502) #25	ENSPANG00000036940	RBM38 (ENSPANG00000020919) #26	CTCFL (ENSPANG00000014250) #27	PCK1 (ENSPANG00000022759) #28	ZBP1 (ENSPANG00000023211) #29	PMEPA1 (ENSPANG00000042070) #30	ENSPANG00000051302	C20orf85 (ENSPANG00000026178) #31	ANKRD60 (ENSPANG00000011166) #32	ENSPANG00000003916 #33	RAB22A (ENSPANG00000022760) #34	VAPB (ENSPANG00000022764) #35
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.a.a ##25	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35
Tree shrew	MODERN SPECIES	7888																TFAP2C (ENSTBEG00000016409) #22
Glires	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.a.a ##25	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35
Lagomorpha	ANCESTRAL SPECIES	158	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00940000169372	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00950000182848.c.b.a.b #22
Rabbit	MODERN SPECIES	445	ZNF217 (ENSOCUG00000011363) #10	BCAS1 (ENSOCUG00000004927) #11	ENSOCUG00000033518	CYP24A1 (ENSOCUG00000004935) #12	ENSOCUG00000004940 #7	ENSOCUG00000025205	DOK5 (ENSOCUG00000009223)	CBLN4 (ENSOCUG00000000072) #13	MC3R (ENSOCUG00000010002)	ENSOCUG00000017897 #16	AURKA (ENSOCUG00000017898) #17	ENSOCUG00000035020	CASS4 (ENSOCUG00000017901) #19	GCNT7 (ENSOCUG00000017904) #21	RTF2 (ENSOCUG00000017902) #20	TFAP2C (ENSOCUG00000010996) #22
Pika	MODERN SPECIES	5080																ENSOPRG00000009865 #22
Rodentia	ANCESTRAL SPECIES	18	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00980000199289	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Muroidea	ANCESTRAL SPECIES	7	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Chinese hamster chok1gshd	MODERN SPECIES	195	ENSCGRG00001007530 #9	Zfp217 (ENSCGRG00001002600) #10	Bcas1 (ENSCGRG00001007157) #11	Cyp24a1 (ENSCGRG00001010160) #12	Pfdn4 (ENSCGRG00001010542) #7	Dok5 (ENSCGRG00001011991)	Cbln4 (ENSCGRG00001012538) #13	Mc3r (ENSCGRG00001015997)	Fam210b (ENSCGRG00001013313) #16	Aurka (ENSCGRG00001014225) #17	Cstf1 (ENSCGRG00001021492) #18	Cass4 (ENSCGRG00001022964) #19	Rtf2 (ENSCGRG00001024046) #20	Gcnt7 (ENSCGRG00001024252) #21	Fam209 (ENSCGRG00001024477)	Tfap2c (ENSCGRG00001000794) #22	Bmp7 (ENSCGRG00001005573) #23	Spo11 (ENSCGRG00001009129) #24	Rae1 (ENSCGRG00001012313) #25	Rbm38 (ENSCGRG00001012928) #26	ENSCGRG00001013637 #27	Pck1 (ENSCGRG00001014463) #28	Zbp1 (ENSCGRG00001015544) #29	Pmepa1 (ENSCGRG00001016444) #30	1700021F07Rik (ENSCGRG00001017573) #31	Ankrd60 (ENSCGRG00001018234) #32	ENSCGRG00001019410 #33	Rab22a (ENSCGRG00001020667) #34	ENSCGRG00001021398 #35	Stx16 (ENSCGRG00001022322) #37	Npepl1 (ENSCGRG00001004173)
Golden Hamster	MODERN SPECIES	664	Sall4 (ENSMAUG00000015814)	Zfp64 (ENSMAUG00000015438)	ENSMAUG00000003995	ENSMAUG00000015308 #11	Cyp24a1 (ENSMAUG00000013246) #12	Pfdn4 (ENSMAUG00000002277) #7	ENSMAUG00000001483	Cbln4 (ENSMAUG00000013556) #13	Mc3r (ENSMAUG00000006998)	Fam210b (ENSMAUG00000020693) #16	ENSMAUG00000008679 #17	Cstf1 (ENSMAUG00000021501) #18	Cass4 (ENSMAUG00000016962) #19	Rtf2 (ENSMAUG00000007866) #20	Gcnt7 (ENSMAUG00000001661) #21	Tfap2c (ENSMAUG00000019572) #22	Bmp7 (ENSMAUG00000015344) #23	Spo11 (ENSMAUG00000020198) #24	Rae1 (ENSMAUG00000015549) #25	Rbm38 (ENSMAUG00000021211) #26	ENSMAUG00000007706 #27	Pck1 (ENSMAUG00000020497) #28	Zbp1 (ENSMAUG00000001095) #29	Pmepa1 (ENSMAUG00000001177) #30	ENSMAUG00000009751	1700021F07Rik (ENSMAUG00000021708) #31	Ankrd60 (ENSMAUG00000007027) #32	Rab22a (ENSMAUG00000008648) #34	Vapb (ENSMAUG00000009589) #35	ENSMAUG00000007705 #37	Npepl1 (ENSMAUG00000010879)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Prairie vole	MODERN SPECIES	357	Bcas1 (ENSMOCG00000004294) #11	Cyp24a1 (ENSMOCG00000016929) #12	ENSMOCG00000000248	ENSMOCG00000013934	Dok5 (ENSMOCG00000006196)	Cbln4 (ENSMOCG00000002519) #13	Mc3r (ENSMOCG00000008736)	Fam210b (ENSMOCG00000012454) #16	Aurka (ENSMOCG00000005866) #17	Cstf1 (ENSMOCG00000022740) #18	Cass4 (ENSMOCG00000002673) #19	Gcnt7 (ENSMOCG00000002404) #21	Rtf2 (ENSMOCG00000021800) #20	Fam209 (ENSMOCG00000021570)	ENSMOCG00000000227	Tfap2c (ENSMOCG00000001600) #22	Bmp7 (ENSMOCG00000016476) #23	Spo11 (ENSMOCG00000021312) #24	Rae1 (ENSMOCG00000009926) #25	Rbm38 (ENSMOCG00000008715) #26	Ctcfl (ENSMOCG00000005492) #27	Pck1 (ENSMOCG00000022228) #28	Zbp1 (ENSMOCG00000019061) #29	Pmepa1 (ENSMOCG00000012737) #30	1700021F07Rik (ENSMOCG00000011767) #31	Ankrd60 (ENSMOCG00000015133) #32	Rab22a (ENSMOCG00000012268) #34	Vapb (ENSMOCG00000021172) #35	ENSMOCG00000003809 #37	Npepl1 (ENSMOCG00000000645)	ENSMOCG00000007565
Northern American deer mouse	MODERN SPECIES	17	Cyp24a1 (ENSPEMG00000014776) #12	Pfdn4 (ENSPEMG00000022289) #7	Dok5 (ENSPEMG00000022784)	ENSPEMG00000030716	ENSPEMG00000027974	Cbln4 (ENSPEMG00000030725) #13	Mc3r (ENSPEMG00000012765)	Fam210b (ENSPEMG00000025841) #16	ENSPEMG00000020059 #17	ENSPEMG00000027444 #17	Cstf1 (ENSPEMG00000019660) #18	Cass4 (ENSPEMG00000019504) #19	Rtf2 (ENSPEMG00000019757) #20	Gcnt7 (ENSPEMG00000019321) #21	Fam209 (ENSPEMG00000019342)	Tfap2c (ENSPEMG00000016187) #22	Bmp7 (ENSPEMG00000019995) #23	Spo11 (ENSPEMG00000019552) #24	Rae1 (ENSPEMG00000020004) #25	Rbm38 (ENSPEMG00000029093) #26	Ctcfl (ENSPEMG00000019496) #27	Pck1 (ENSPEMG00000020073) #28	Zbp1 (ENSPEMG00000016060) #29	Pmepa1 (ENSPEMG00000017336) #30	1700021F07Rik (ENSPEMG00000018608) #31	Ankrd60 (ENSPEMG00000000107) #32	Rab22a (ENSPEMG00000000644) #34	Vapb (ENSPEMG00000003426) #35	ENSPEMG00000005444 #36	Stx16 (ENSPEMG00000007473) #37	Npepl1 (ENSPEMG00000008023)
Murinae	ANCESTRAL SPECIES	1	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00860000136235	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT01090000262946	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00860000136235	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Mus_A	ANCESTRAL SPECIES		ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT01090000262946	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00860000136235	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Mus_B	ANCESTRAL SPECIES	1	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00860000136235	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT01090000262956	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00860000136235	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Steppe mouse	MODERN SPECIES	3237								Mc3r (ENSMSIG00000026397)	Fam210b (ENSMSIG00000026403) #16	ENSMSIG00000026412 #17	Cstf1 (ENSMSIG00000026444) #18	Cass4 (ENSMSIG00000026462) #19	Rtf2 (ENSMSIG00000026543) #20	Gcnt7 (ENSMSIG00000026556) #21	Fam209 (ENSMSIG00000026567)	Tfap2c (ENSMSIG00000026572) #22	Bmp7 (ENSMSIG00000026606) #23	Spo11 (ENSMSIG00000026627) #24	Rae1 (ENSMSIG00000026688) #25	Rbm38 (ENSMSIG00000026715) #26	Ctcfl (ENSMSIG00000026727) #27	Pck1 (ENSMSIG00000026751) #28	Zbp1 (ENSMSIG00000026758) #29	Pmepa1 (ENSMSIG00000026776) #30	1700021F07Rik (ENSMSIG00000026800) #31	Ankrd60 (ENSMSIG00000026809) #32	Rab22a (ENSMSIG00000026825) #34	Vapb (ENSMSIG00000026843) #35	ENSMSIG00000026853	ENSMSIG00000026862	Stx16 (ENSMSIG00000026872) #37
spretus	MODERN SPECIES	11	Zfp217 (MGP_SPRETEiJ_G0025646) #10	Bcas1 (MGP_SPRETEiJ_G0025647) #11	Cyp24a1 (MGP_SPRETEiJ_G0025648) #12	Pfdn4 (MGP_SPRETEiJ_G0025649) #7	MGP_SPRETEiJ_G0025650	Dok5 (MGP_SPRETEiJ_G0025651)	Cbln4 (MGP_SPRETEiJ_G0025652) #13	Mc3r (MGP_SPRETEiJ_G0025653)	Fam210b (MGP_SPRETEiJ_G0025654) #16	Aurka (MGP_SPRETEiJ_G0025655) #17	Cstf1 (MGP_SPRETEiJ_G0025656) #18	Cass4 (MGP_SPRETEiJ_G0025657) #19	Rtf2 (MGP_SPRETEiJ_G0025658) #20	Gcnt7 (MGP_SPRETEiJ_G0025659) #21	Fam209 (MGP_SPRETEiJ_G0025660)	Tfap2c (MGP_SPRETEiJ_G0025661) #22	Bmp7 (MGP_SPRETEiJ_G0025662) #23	Spo11 (MGP_SPRETEiJ_G0025663) #24	Rae1 (MGP_SPRETEiJ_G0025664) #25	Rbm38 (MGP_SPRETEiJ_G0025665) #26	Ctcfl (MGP_SPRETEiJ_G0025666) #27	Pck1 (MGP_SPRETEiJ_G0025667) #28	Zbp1 (MGP_SPRETEiJ_G0025668) #29	Pmepa1 (MGP_SPRETEiJ_G0025669) #30	1700021F07Rik (MGP_SPRETEiJ_G0025670) #31	Ankrd60 (MGP_SPRETEiJ_G0025671) #32	Rab22a (MGP_SPRETEiJ_G0025672) #34	MGP_SPRETEiJ_G0025673	Vapb (MGP_SPRETEiJ_G0025674) #35	Stx16 (MGP_SPRETEiJ_G0025675) #37	Npepl1 (MGP_SPRETEiJ_G0025676)
Mouse	MODERN SPECIES	11	Tshz2 (ENSMUSG00000047907)	Zfp217 (ENSMUSG00000052056) #10	Bcas1 (ENSMUSG00000013523) #11	Cyp24a1 (ENSMUSG00000038567) #12	Pfdn4 (ENSMUSG00000052033) #7	Dok5 (ENSMUSG00000027560)	Cbln4 (ENSMUSG00000067578) #13	Mc3r (ENSMUSG00000038537)	Fam210b (ENSMUSG00000027495) #16	Aurka (ENSMUSG00000027496) #17	Cstf1 (ENSMUSG00000027498) #18	Cass4 (ENSMUSG00000074570) #19	Rtf2 (ENSMUSG00000027502) #20	Gcnt7 (ENSMUSG00000074569) #21	Fam209 (ENSMUSG00000027505)	Tfap2c (ENSMUSG00000028640) #22	Bmp7 (ENSMUSG00000008999) #23	Spo11 (ENSMUSG00000005883) #24	Rae1 (ENSMUSG00000027509) #25	Rbm38 (ENSMUSG00000027510) #26	Ctcfl (ENSMUSG00000070495) #27	Pck1 (ENSMUSG00000027513) #28	Zbp1 (ENSMUSG00000027514) #29	Pmepa1 (ENSMUSG00000038400) #30	1700021F07Rik (ENSMUSG00000027518) #31	Ankrd60 (ENSMUSG00000027517) #32	Rab22a (ENSMUSG00000027519) #34	Vapb (ENSMUSG00000054455) #35	Stx16 (ENSMUSG00000027522) #37	Npepl1 (ENSMUSG00000039263)	Gnas (ENSMUSG00000027523)
Ryukyu mouse	MODERN SPECIES	11	Zfp217 (MGP_CAROLIEiJ_G0024726) #10	Bcas1 (MGP_CAROLIEiJ_G0024727) #11	Cyp24a1 (MGP_CAROLIEiJ_G0024728) #12	MGP_CAROLIEiJ_G0024729 #7	MGP_CAROLIEiJ_G0024730	Dok5 (MGP_CAROLIEiJ_G0024731)	Cbln4 (MGP_CAROLIEiJ_G0024732) #13	Mc3r (MGP_CAROLIEiJ_G0024733)	Fam210b (MGP_CAROLIEiJ_G0024734) #16	Aurka (MGP_CAROLIEiJ_G0024735) #17	Cstf1 (MGP_CAROLIEiJ_G0024736) #18	Cass4 (MGP_CAROLIEiJ_G0024737) #19	Rtf2 (MGP_CAROLIEiJ_G0024738) #20	Gcnt7 (MGP_CAROLIEiJ_G0024739) #21	Fam209 (MGP_CAROLIEiJ_G0024740)	Tfap2c (MGP_CAROLIEiJ_G0024741) #22	Bmp7 (MGP_CAROLIEiJ_G0024742) #23	Spo11 (MGP_CAROLIEiJ_G0024743) #24	Rae1 (MGP_CAROLIEiJ_G0024744) #25	Rbm38 (MGP_CAROLIEiJ_G0024745) #26	Ctcfl (MGP_CAROLIEiJ_G0024746) #27	Pck1 (MGP_CAROLIEiJ_G0024747) #28	Zbp1 (MGP_CAROLIEiJ_G0024748) #29	Pmepa1 (MGP_CAROLIEiJ_G0024749) #30	1700021F07Rik (MGP_CAROLIEiJ_G0024750) #31	Ankrd60 (MGP_CAROLIEiJ_G0024751) #32	Rab22a (MGP_CAROLIEiJ_G0024752) #34	Vapb (MGP_CAROLIEiJ_G0024753) #35	Stx16 (MGP_CAROLIEiJ_G0024754) #37	Npepl1 (MGP_CAROLIEiJ_G0024755)	Gnas (MGP_CAROLIEiJ_G0024756)
Shrew mouse	MODERN SPECIES	16	Zfp217 (MGP_PahariEiJ_G0026167) #10	Bcas1 (MGP_PahariEiJ_G0026168) #11	Cyp24a1 (MGP_PahariEiJ_G0026169) #12	Pfdn4 (MGP_PahariEiJ_G0026170) #7	MGP_PahariEiJ_G0026171	Dok5 (MGP_PahariEiJ_G0026172)	Cbln4 (MGP_PahariEiJ_G0026173) #13	Mc3r (MGP_PahariEiJ_G0026174)	Fam210b (MGP_PahariEiJ_G0026175) #16	Aurka (MGP_PahariEiJ_G0026176) #17	Cstf1 (MGP_PahariEiJ_G0026177) #18	Cass4 (MGP_PahariEiJ_G0026178) #19	Rtf2 (MGP_PahariEiJ_G0026179) #20	Gcnt7 (MGP_PahariEiJ_G0026180) #21	Fam209 (MGP_PahariEiJ_G0026181)	Tfap2c (MGP_PahariEiJ_G0026182) #22	Bmp7 (MGP_PahariEiJ_G0026183) #23	Spo11 (MGP_PahariEiJ_G0026184) #24	Rae1 (MGP_PahariEiJ_G0026185) #25	Rbm38 (MGP_PahariEiJ_G0026186) #26	Ctcfl (MGP_PahariEiJ_G0026187) #27	Pck1 (MGP_PahariEiJ_G0026188) #28	MGP_PahariEiJ_G0026189 #29	Pmepa1 (MGP_PahariEiJ_G0026190) #30	1700021F07Rik (MGP_PahariEiJ_G0026191) #31	Ankrd60 (MGP_PahariEiJ_G0026192) #32	Rab22a (MGP_PahariEiJ_G0026193) #34	MGP_PahariEiJ_G0026194	Vapb (MGP_PahariEiJ_G0026195) #35	Stx16 (MGP_PahariEiJ_G0026196) #37	Npepl1 (MGP_PahariEiJ_G0026197)
Rat	MODERN SPECIES	13	ENSRNOG00000063885	ENSRNOG00000064257	Cyp24a1 (ENSRNOG00000013062) #12	Pfdn4 (ENSRNOG00000050932) #7	Dok5 (ENSRNOG00000013196)	ENSRNOG00000065655	Cbln4 (ENSRNOG00000004372) #13	Mc3r (ENSRNOG00000004451)	Fam210b (ENSRNOG00000004466) #16	Aurka (ENSRNOG00000004479) #17	Cstf1 (ENSRNOG00000004775) #18	Cass4 (ENSRNOG00000021560) #19	Rtfdc1 (ENSRNOG00000005083) #20	Gcnt7 (ENSRNOG00000063099) #21	Fam209 (ENSRNOG00000005235)	Tfap2c (ENSRNOG00000005246) #22	Bmp7 (ENSRNOG00000053384) #23	Spo11 (ENSRNOG00000006732) #24	Rae1 (ENSRNOG00000021295) #25	Rbm38 (ENSRNOG00000006420) #26	Uchl3 (ENSRNOG00000065893)	Ctcfl (ENSRNOG00000028661) #27	Pck1 (ENSRNOG00000028616) #28	Zbp1 (ENSRNOG00000006314) #29	Pmepa1 (ENSRNOG00000050404) #30	C3h20orf85 (ENSRNOG00000028533) #31	Ankrd60 (ENSRNOG00000070627) #32	ENSRNOG00000065334	Rab22a (ENSRNOG00000005762) #34	ENSRNOG00000069922	Vapb (ENSRNOG00000005331) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	460								ENSNGAG00000023736	Fam210b (ENSNGAG00000023184) #16	Aurka (ENSNGAG00000022340) #17	Cstf1 (ENSNGAG00000020130) #18	Cass4 (ENSNGAG00000011741) #19	Gcnt7 (ENSNGAG00000014678) #21	Rtf2 (ENSNGAG00000023717) #20	Fam209 (ENSNGAG00000023427)	Tfap2c (ENSNGAG00000021153) #22	Bmp7 (ENSNGAG00000024076) #23	Spo11 (ENSNGAG00000018412) #24	Rae1 (ENSNGAG00000016278) #25	ENSNGAG00000014017 #26	ENSNGAG00000012622	Ctcfl (ENSNGAG00000001461) #27	Pck1 (ENSNGAG00000012480) #28	Zbp1 (ENSNGAG00000023407) #29	Pmepa1 (ENSNGAG00000005913) #30	1700021F07Rik (ENSNGAG00000014781) #31	Ankrd60 (ENSNGAG00000014698) #32	Rab22a (ENSNGAG00000012652) #34	ENSNGAG00000011035 #35	ENSNGAG00000023410 #37	Npepl1 (ENSNGAG00000023126)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	188	ENSJJAG00000000200	Urod (ENSJJAG00000006308)	Hectd3 (ENSJJAG00000018823)	ENSJJAG00000014051	Eif2b3 (ENSJJAG00000022753)	Ptch2 (ENSJJAG00000007228)	Btbd19 (ENSJJAG00000010790)	Plk3 (ENSJJAG00000014431)	ENSJJAG00000015129	ENSJJAG00000017451	Kif2c (ENSJJAG00000021537)	Armh1 (ENSJJAG00000009395)	Tmem53 (ENSJJAG00000018876)	Rnf220 (ENSJJAG00000023401)	Eri3 (ENSJJAG00000006624)	ENSJJAG00000008723 #22	Dmap1 (ENSJJAG00000011572)	ENSJJAG00000017607	ENSJJAG00000020323
Lesser Egyptian jerboa	MODERN SPECIES	107	Kcng1 (ENSJJAG00000012496)	Nfatc2 (ENSJJAG00000022151)	Atp9a (ENSJJAG00000014602)	Sall4 (ENSJJAG00000020688)	Zfp64 (ENSJJAG00000013954)	ENSJJAG00000002372	ENSJJAG00000002075 #9	Bcas1 (ENSJJAG00000014333) #11	Dok5 (ENSJJAG00000020159)	ENSJJAG00000017187	Mc3r (ENSJJAG00000002102)	ENSJJAG00000020175 #17	Cstf1 (ENSJJAG00000016089) #18	Cass4 (ENSJJAG00000024186) #19	Gcnt7 (ENSJJAG00000020200) #21	ENSJJAG00000007606 #22	Bmp7 (ENSJJAG00000019966) #23	ENSJJAG00000018364 #25	ENSJJAG00000016299 #26	ENSJJAG00000022019	Pck1 (ENSJJAG00000011814) #28	Pmepa1 (ENSJJAG00000000478) #30
Kangaroo rat	MODERN SPECIES	394	Zfp217 (ENSDORG00000023982) #10	Bcas1 (ENSDORG00000002327) #11	Cyp24a1 (ENSDORG00000016127) #12	ENSDORG00000006644	Dok5 (ENSDORG00000007241)	Cbln4 (ENSDORG00000009501) #13	ENSDORG00000029002	Mc3r (ENSDORG00000001167)	Fam210b (ENSDORG00000008544) #16	Aurka (ENSDORG00000008545) #17	Cstf1 (ENSDORG00000008546) #18	Cass4 (ENSDORG00000007789) #19	Gcnt7 (ENSDORG00000007793) #21	Rtf2 (ENSDORG00000028729) #20	Fam209 (ENSDORG00000010389)	Tfap2c (ENSDORG00000013943) #22	Bmp7 (ENSDORG00000000717) #23	Spo11 (ENSDORG00000003757) #24	Rae1 (ENSDORG00000003758) #25	ENSDORG00000024827	Pck1 (ENSDORG00000010927) #28	1700021F07Rik (ENSDORG00000005273) #31	ENSDORG00000005274 #32	Rab22a (ENSDORG00000001998) #34	Vapb (ENSDORG00000028488) #35	Stx16 (ENSDORG00000007578) #37	Npepl1 (ENSDORG00000001643)	ENSDORG00000028088	ENSDORG00000004279	Nelfcd (ENSDORG00000004285)	Ctsz (ENSDORG00000004288)
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B.n #37	ENSGT00530000063255.A
Marmotini	ANCESTRAL SPECIES	5	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B.n #37	ENSGT00530000063255.A
Marmotini_b	ANCESTRAL SPECIES	29							ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B.n #37	ENSGT00530000063255.A
Squirrel	MODERN SPECIES	474								MC3R (ENSSTOG00000022025)	FAM210B (ENSSTOG00000011956) #16	ENSSTOG00000011958 #17	CSTF1 (ENSSTOG00000021271) #18	CASS4 (ENSSTOG00000011983) #19	RTF2 (ENSSTOG00000020726) #20	GCNT7 (ENSSTOG00000012001) #21	ENSSTOG00000021790	TFAP2C (ENSSTOG00000014299) #22
Arctic ground squirrel	MODERN SPECIES	342								CBLN4 (ENSUPAG00010005179) #13	MC3R (ENSUPAG00010005175)	FAM210B (ENSUPAG00010005166) #16	AURKA (ENSUPAG00010005160) #17	CSTF1 (ENSUPAG00010005153) #18	CASS4 (ENSUPAG00010005120) #19	GCNT7 (ENSUPAG00010005117) #21	RTF2 (ENSUPAG00010005110) #20	TFAP2C (ENSUPAG00010005104) #22	BMP7 (ENSUPAG00010005102) #23	SPO11 (ENSUPAG00010005062) #24	RAE1 (ENSUPAG00010005042) #25	RBM38 (ENSUPAG00010005035) #26	CTCFL (ENSUPAG00010004786) #27	PCK1 (ENSUPAG00010004761) #28	ZBP1 (ENSUPAG00010004758) #29	PMEPA1 (ENSUPAG00010004754) #30	C20orf85 (ENSUPAG00010004748) #31
Alpin marmot	MODERN SPECIES		ENSMMMG00000008228 #9	ZNF217 (ENSMMMG00000008233) #10	BCAS1 (ENSMMMG00000008267) #11	CYP24A1 (ENSMMMG00000008409) #12	PFDN4 (ENSMMMG00000008431) #7	DOK5 (ENSMMMG00000008468)	CBLN4 (ENSMMMG00000008501) #13	MC3R (ENSMMMG00000008520)	FAM210B (ENSMMMG00000008521) #16	AURKA (ENSMMMG00000008526) #17	CSTF1 (ENSMMMG00000008566) #18	CASS4 (ENSMMMG00000008599) #19	RTF2 (ENSMMMG00000008617) #20	GCNT7 (ENSMMMG00000008630) #21	ENSMMMG00000008638	TFAP2C (ENSMMMG00000008643) #22	BMP7 (ENSMMMG00000008665) #23	SPO11 (ENSMMMG00000008700) #24	RAE1 (ENSMMMG00000008713) #25	RBM38 (ENSMMMG00000008726) #26	ENSMMMG00000008738 #27	PCK1 (ENSMMMG00000008769) #28	ZBP1 (ENSMMMG00000008783) #29	PMEPA1 (ENSMMMG00000008827) #30	C20orf85 (ENSMMMG00000008838) #31	ENSMMMG00000008844 #32	RAB22A (ENSMMMG00000008862) #34	VAPB (ENSMMMG00000008874) #35	APCDD1L (ENSMMMG00000008880) #36	ENSMMMG00000008912 #37	NPEPL1 (ENSMMMG00000008927)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	11	BCAS1 (ENSSVLG00005000986) #11	CYP24A1 (ENSSVLG00005001045) #12	PFDN4 (ENSSVLG00005001111) #7	DOK5 (ENSSVLG00005001133)	CBLN4 (ENSSVLG00005001167) #13	ENSSVLG00005001173	ENSSVLG00005001189	MC3R (ENSSVLG00005001203)	FAM210B (ENSSVLG00005001217) #16	ENSSVLG00005001248 #17	CSTF1 (ENSSVLG00005001285) #18	CASS4 (ENSSVLG00005001328) #19	RTF2 (ENSSVLG00005001366) #20	GCNT7 (ENSSVLG00005001383) #21	ENSSVLG00005001400	ENSSVLG00005001414 #22	BMP7 (ENSSVLG00005001445) #23	SPO11 (ENSSVLG00005001490) #24	RAE1 (ENSSVLG00005001577) #25	RBM38 (ENSSVLG00005001602) #26	CTCFL (ENSSVLG00005001655) #27	PCK1 (ENSSVLG00005001714) #28	ENSSVLG00005001739 #29	PMEPA1 (ENSSVLG00005001767) #30	C20orf85 (ENSSVLG00005001802) #31	RAB22A (ENSSVLG00005001823) #34	VAPB (ENSSVLG00005001847) #35	STX16 (ENSSVLG00005001909) #37	NPEPL1 (ENSSVLG00005001996)	ENSSVLG00005002013	GNAS (ENSSVLG00005002064)
Eurasian red squirrel	MODERN SPECIES	13	DKK1 (ENSSVLG00005004962)	MBL2 (ENSSVLG00005004931)	ENSSVLG00005004910	ENSSVLG00005004891	ENSSVLG00005004862	ENSSVLG00005004849	ENSSVLG00005004794	ENSSVLG00005004768	ENSSVLG00005004616	ENSSVLG00005004508	ENSSVLG00005004485	ENSSVLG00005004455	ENSSVLG00005004422	ENSSVLG00005004408	ENSSVLG00005004400	ENSSVLG00005004387 #22	ENSSVLG00005004363	ZNF582 (ENSSVLG00005004324)	ENSSVLG00005004183	ENSSVLG00005004081	ENSSVLG00005004042	ENSSVLG00005004033	ENSSVLG00005004015	ENSSVLG00005004004	ENSSVLG00005003992	ENSSVLG00005003973	ENSSVLG00005003956	ENSSVLG00005003941	ENSSVLG00005003891	ENSSVLG00005003873	ENSSVLG00005003860
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.a.b ##25	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.ac.a #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.ac.a.b #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Degu	DUPLICATION
Degu	MODERN SPECIES	118	ZNF217 (ENSODEG00000006753) #10	ENSODEG00000006282	CYP24A1 (ENSODEG00000005827) #12	ENSODEG00000005992 #7	DOK5 (ENSODEG00000009072)	CBLN4 (ENSODEG00000008098) #13	ENSODEG00000007202	MC3R (ENSODEG00000019495)	FAM210B (ENSODEG00000005961) #16	ENSODEG00000007572 #17	ENSODEG00000019482	CASS4 (ENSODEG00000006198) #19	GCNT7 (ENSODEG00000006051) #21	RTF2 (ENSODEG00000005634) #20	ENSODEG00000006029	ENSODEG00000005762 #22	BMP7 (ENSODEG00000005399) #23	SPO11 (ENSODEG00000006573) #24	ENSODEG00000005687 #25	RBM38 (ENSODEG00000007980) #26	PCK1 (ENSODEG00000007233) #28	PMEPA1 (ENSODEG00000007664) #30
Degu	MODERN SPECIES	45	ENSODEG00000007887	TMTC3 (ENSODEG00000008731)	KITLG (ENSODEG00000008273)	ENSODEG00000007947	DUSP6 (ENSODEG00000008318)	POC1B (ENSODEG00000009236)	ATP2B1 (ENSODEG00000008306)	CCER1 (ENSODEG00000008447)	EPYC (ENSODEG00000008874)	KERA (ENSODEG00000007830)	LUM (ENSODEG00000008234)	DCN (ENSODEG00000008978)	EEA1 (ENSODEG00000009521)	ENSODEG00000010329	ENSODEG00000008681	ENSODEG00000008633 #22	ENSODEG00000010298	CRADD (ENSODEG00000010922)	ENSODEG00000008627	CEP83 (ENSODEG00000010822)	TMCC3 (ENSODEG00000009728)	ENSODEG00000010717	NR2C1 (ENSODEG00000008809)	FGD6 (ENSODEG00000009828)	ENSODEG00000019673	VEZT (ENSODEG00000008709)	ENSODEG00000008729	NTN4 (ENSODEG00000009703)	SNRPF (ENSODEG00000010328)	CCDC38 (ENSODEG00000010228)	AMDHD1 (ENSODEG00000009067)
Long-tailed chinchilla	MODERN SPECIES	152	ENSCLAG00000017696 #9	ENSCLAG00000006928 #10	BCAS1 (ENSCLAG00000006299) #11	CYP24A1 (ENSCLAG00000006942) #12	ENSCLAG00000009443 #7	DOK5 (ENSCLAG00000009152)	CBLN4 (ENSCLAG00000006156) #13	MC3R (ENSCLAG00000017777)	FAM210B (ENSCLAG00000005865) #16	AURKA (ENSCLAG00000009511) #17	CSTF1 (ENSCLAG00000006676) #18	CASS4 (ENSCLAG00000005692) #19	GCNT7 (ENSCLAG00000006522) #21	RTF2 (ENSCLAG00000005946) #20	ENSCLAG00000005877	TFAP2C (ENSCLAG00000008347) #22	ENSCLAG00000006921	BMP7 (ENSCLAG00000006692) #23	SPO11 (ENSCLAG00000008712) #24	RAE1 (ENSCLAG00000006500) #25	RBM38 (ENSCLAG00000005906) #26	CTCFL (ENSCLAG00000004596) #27	PCK1 (ENSCLAG00000008119) #28	ZBP1 (ENSCLAG00000012154) #29	PMEPA1 (ENSCLAG00000010850) #30	C20orf85 (ENSCLAG00000012263) #31	ENSCLAG00000009855 #32	ENSCLAG00000006547 #33	RAB22A (ENSCLAG00000005077) #34	ENSCLAG00000004633	VAPB (ENSCLAG00000012950) #35
Guinea pig	MODERN SPECIES	96	ZNF217 (ENSCPOG00000027399) #10	BCAS1 (ENSCPOG00000009194) #11	CYP24A1 (ENSCPOG00000010077) #12	ENSCPOG00000032848 #7	DOK5 (ENSCPOG00000012780)	ENSCPOG00000010289	CBLN4 (ENSCPOG00000011681) #13	MC3R (ENSCPOG00000024876)	FAM210B (ENSCPOG00000006630) #16	ENSCPOG00000006633 #17	CSTF1 (ENSCPOG00000004957) #18	CASS4 (ENSCPOG00000026525) #19	GCNT7 (ENSCPOG00000035093) #21	ENSCPOG00000024456	RTF2 (ENSCPOG00000030139) #20	TFAP2C (ENSCPOG00000023253) #22	BMP7 (ENSCPOG00000035536) #23	SPO11 (ENSCPOG00000011677) #24	RAE1 (ENSCPOG00000008932) #25	RBM38 (ENSCPOG00000012781) #26	ENSCPOG00000006577 #27	PCK1 (ENSCPOG00000006584) #28
Naked mole-rat female	MODERN SPECIES	6																ENSHGLG00000006368 #22	ENSHGLG00000042857	SPO11 (ENSHGLG00000005570) #24	ENSHGLG00000032886 ##25	ENSHGLG00000046963 #25	RBM38 (ENSHGLG00000046203) #26	ENSHGLG00000033387 #27	PCK1 (ENSHGLG00000018888) #28	C20orf85 (ENSHGLG00000019072) #31	ENSHGLG00000013351 #33	RAB22A (ENSHGLG00000009337) #34	VAPB (ENSHGLG00000049133) #35	APCDD1L (ENSHGLG00000044632) #36	STX16 (ENSHGLG00000005872) #37	ENSHGLG00000005914	ENSHGLG00000005981
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182848.c.b.a.b #22
Common shrew	MODERN SPECIES	7214																ENSSARG00000001996 #22
Hedgehog	MODERN SPECIES	14439																TFAP2C (ENSEEUG00000015301) #22
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Suina	ANCESTRAL SPECIES	9	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Pig	MODERN SPECIES	8	PFDN4 (ENSSSCG00000007487) #7	DOK5 (ENSSSCG00000007488)	ENSSSCG00000030971	ENSSSCG00000041198	ENSSSCG00000047657	ENSSSCG00000047911	CBLN4 (ENSSSCG00000007490) #13	MC3R (ENSSSCG00000007491)	FAM210B (ENSSSCG00000007492) #16	ENSSSCG00000007493 #17	CSTF1 (ENSSSCG00000007494) #18	CASS4 (ENSSSCG00000007495) #19	RTF2 (ENSSSCG00000007496) #20	GCNT7 (ENSSSCG00000007497) #21	FAM209B (ENSSSCG00000007498)	TFAP2C (ENSSSCG00000007499) #22	ENSSSCG00000007500	BMP7 (ENSSSCG00000007501) #23	SPO11 (ENSSSCG00000007502) #24	RAE1 (ENSSSCG00000007503) #25	RBM38 (ENSSSCG00000007504) #26	CTCFL (ENSSSCG00000007505) #27	PCK1 (ENSSSCG00000007507) #28	ZBP1 (ENSSSCG00000007508) #29	PMEPA1 (ENSSSCG00000034259) #30	C20orf85 (ENSSSCG00000007510) #31	ANKRD60 (ENSSSCG00000007511) #32	ENSSSCG00000007512 #33	RAB22A (ENSSSCG00000007513) #34	VAPB (ENSSSCG00000007514) #35	APCDD1L (ENSSSCG00000007515) #36
Chacoan peccary	MODERN SPECIES	801	BCAS1 (ENSCWAG00000004272) #11	CYP24A1 (ENSCWAG00000004053) #12	ENSCWAG00000004002 #7	DOK5 (ENSCWAG00000003971)	ENSCWAG00000003959	CBLN4 (ENSCWAG00000003931) #13	ENSCWAG00000003907	MC3R (ENSCWAG00000003893)	FAM210B (ENSCWAG00000003878) #16	AURKA (ENSCWAG00000003823) #17	CSTF1 (ENSCWAG00000003789) #18	CASS4 (ENSCWAG00000003694) #19	GCNT7 (ENSCWAG00000013939) #21	RTF2 (ENSCWAG00000013880) #20	ENSCWAG00000013848	TFAP2C (ENSCWAG00000013788) #22	BMP7 (ENSCWAG00000013637) #23	SPO11 (ENSCWAG00000013226) #24	RAE1 (ENSCWAG00000013163) #25	RBM38 (ENSCWAG00000013092) #26	CTCFL (ENSCWAG00000012475) #27	PCK1 (ENSCWAG00000012380) #28	ZBP1 (ENSCWAG00000012192) #29	PMEPA1 (ENSCWAG00000012098) #30	C20orf85 (ENSCWAG00000012049) #31	RAB22A (ENSCWAG00000011920) #34	ENSCWAG00000011835 #35	APCDD1L (ENSCWAG00000011751) #36	STX16 (ENSCWAG00000011369) #37	NPEPL1 (ENSCWAG00000011185)
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000159884 #10	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000159884 #10	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000159884 #10	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000159884 #10	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000159884 #10	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Narwhal	MODERN SPECIES	299	ENSMMNG00015000402	BCAS1 (ENSMMNG00015000370) #11	CYP24A1 (ENSMMNG00015000319) #12	PFDN4 (ENSMMNG00015000280) #7	DOK5 (ENSMMNG00015000246)	ENSMMNG00015000209	CBLN4 (ENSMMNG00015000195) #13	MC3R (ENSMMNG00015000177)	FAM210B (ENSMMNG00015000159) #16	AURKA (ENSMMNG00015000130) #17	CSTF1 (ENSMMNG00015000105) #18	CASS4 (ENSMMNG00015000069) #19	GCNT7 (ENSMMNG00015000042) #21	RTF2 (ENSMMNG00015004751) #20	ENSMMNG00015004746	TFAP2C (ENSMMNG00015004743) #22	BMP7 (ENSMMNG00015004731) #23	SPO11 (ENSMMNG00015004707) #24	RAE1 (ENSMMNG00015004687) #25	RBM38 (ENSMMNG00015004680) #26	ENSMMNG00015004668 #27	PCK1 (ENSMMNG00015004656) #28	ENSMMNG00015004653 #29	PMEPA1 (ENSMMNG00015004645) #30	C20orf85 (ENSMMNG00015004638) #31	RAB22A (ENSMMNG00015004617) #34	VAPB (ENSMMNG00015004608) #35	APCDD1L (ENSMMNG00015004601) #36	NPEPL1 (ENSMMNG00015004513)	ENSMMNG00015004407	ENSMMNG00015004380
Beluga whale	MODERN SPECIES	36	ZNF217 (ENSDLEG00000001937) #10	ENSDLEG00000001927	BCAS1 (ENSDLEG00000001828) #11	CYP24A1 (ENSDLEG00000001776) #12	PFDN4 (ENSDLEG00000001762) #7	DOK5 (ENSDLEG00000001742)	CBLN4 (ENSDLEG00000001722) #13	MC3R (ENSDLEG00000001714)	FAM210B (ENSDLEG00000001702) #16	AURKA (ENSDLEG00000001687) #17	CSTF1 (ENSDLEG00000001658) #18	CASS4 (ENSDLEG00000001641) #19	GCNT7 (ENSDLEG00000001619) #21	RTFDC1 (ENSDLEG00000001595) #20	ENSDLEG00000001584	TFAP2C (ENSDLEG00000001553) #22	BMP7 (ENSDLEG00000001532) #23	SPO11 (ENSDLEG00000001479) #24	RAE1 (ENSDLEG00000001455) #25	RBM38 (ENSDLEG00000001441) #26	CTCFL (ENSDLEG00000001310) #27	PCK1 (ENSDLEG00000001260) #28	ZBP1 (ENSDLEG00000001241) #29	PMEPA1 (ENSDLEG00000001226) #30	C20orf85 (ENSDLEG00000001209) #31	ENSDLEG00000001197 #32	ENSDLEG00000001154 #33	ENSDLEG00000001126 #34	VAPB (ENSDLEG00000001100) #35	APCDD1L (ENSDLEG00000001085) #36	STX16 (ENSDLEG00000001058) #37
Vaquita	MODERN SPECIES	6	ENSPSNG00000020106 #9	ZNF217 (ENSPSNG00000020078) #10	ENSPSNG00000020059	BCAS1 (ENSPSNG00000019991) #11	CYP24A1 (ENSPSNG00000019798) #12	PFDN4 (ENSPSNG00000019742) #7	DOK5 (ENSPSNG00000019697)	CBLN4 (ENSPSNG00000019654) #13	MC3R (ENSPSNG00000019606)	FAM210B (ENSPSNG00000019586) #16	AURKA (ENSPSNG00000019542) #17	CSTF1 (ENSPSNG00000019520) #18	CASS4 (ENSPSNG00000019490) #19	GCNT7 (ENSPSNG00000019434) #21	RTF2 (ENSPSNG00000019378) #20	TFAP2C (ENSPSNG00000019329) #22	BMP7 (ENSPSNG00000019245) #23	SPO11 (ENSPSNG00000018975) #24	RAE1 (ENSPSNG00000018876) #25	RBM38 (ENSPSNG00000018800) #26	ENSPSNG00000018701 #27	PCK1 (ENSPSNG00000018615) #28	ENSPSNG00000018539 #29	PMEPA1 (ENSPSNG00000018424) #30	C20orf85 (ENSPSNG00000018366) #31	ENSPSNG00000018112 #33	RAB22A (ENSPSNG00000018063) #34	VAPB (ENSPSNG00000018009) #35	APCDD1L (ENSPSNG00000017956) #36	STX16 (ENSPSNG00000017704) #37	NPEPL1 (ENSPSNG00000017505)
Dolphin	MODERN SPECIES	4979																TFAP2C (ENSTTRG00000005983) #22
Sperm whale	MODERN SPECIES	5	BCAS1 (ENSPCTG00005020687) #11	CYP24A1 (ENSPCTG00005020488) #12	PFDN4 (ENSPCTG00005020437) #7	DOK5 (ENSPCTG00005020398)	ENSPCTG00005020331	ENSPCTG00005020310	CBLN4 (ENSPCTG00005020287) #13	MC3R (ENSPCTG00005020261)	FAM210B (ENSPCTG00005020243) #16	AURKA (ENSPCTG00005020213) #17	CSTF1 (ENSPCTG00005020190) #18	CASS4 (ENSPCTG00005020081) #19	GCNT7 (ENSPCTG00005020022) #21	RTF2 (ENSPCTG00005019989) #20	ENSPCTG00005019969	TFAP2C (ENSPCTG00005019905) #22	BMP7 (ENSPCTG00005019690) #23	SPO11 (ENSPCTG00005019409) #24	RAE1 (ENSPCTG00005019375) ##25	NPEPL1 (ENSPCTG00005019263)	STX16 (ENSPCTG00005019004) #37	APCDD1L (ENSPCTG00005018939) #36	VAPB (ENSPCTG00005018875) #35	RAB22A (ENSPCTG00005018849) #34	ANKRD60 (ENSPCTG00005018795) #32	ENSPCTG00005018682	GNAS (ENSPCTG00005018125)	CTSZ (ENSPCTG00005018064)	NELFCD (ENSPCTG00005017957)	CTCFL (ENSPCTG00005017424) #27	PCK1 (ENSPCTG00005017262) #28
Blue whale	MODERN SPECIES	6	ENSBMSG00010017734	BCAS1 (ENSBMSG00010017677) #11	CYP24A1 (ENSBMSG00010017495) #12	ENSBMSG00010017440 #7	ENSBMSG00010017414	DOK5 (ENSBMSG00010017385)	CBLN4 (ENSBMSG00010017348) #13	MC3R (ENSBMSG00010017331)	FAM210B (ENSBMSG00010017312) #16	AURKA (ENSBMSG00010017273) #17	CSTF1 (ENSBMSG00010017244) #18	CASS4 (ENSBMSG00010017207) #19	GCNT7 (ENSBMSG00010017169) #21	RTF2 (ENSBMSG00010017141) #20	ENSBMSG00010017111	TFAP2C (ENSBMSG00010017082) #22	BMP7 (ENSBMSG00010017011) #23	SPO11 (ENSBMSG00010016851) #24	RAE1 (ENSBMSG00010016769) #25	RBM38 (ENSBMSG00010016708) #26	CTCFL (ENSBMSG00010015901) #27	PCK1 (ENSBMSG00010015806) #28	ENSBMSG00010015746 #29	PMEPA1 (ENSBMSG00010015696) #30	C20orf85 (ENSBMSG00010015677) #31	ENSBMSG00010015546 #33	RAB22A (ENSBMSG00010015517) #34	VAPB (ENSBMSG00010015477) #35	APCDD1L (ENSBMSG00010015438) #36	STX16 (ENSBMSG00010015262) #37	NPEPL1 (ENSBMSG00010015181)
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000161638	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000161638	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000161638	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Caprinae	ANCESTRAL SPECIES	21	ENSGT00940000161638	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a.a	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134.m #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A	ENSGT00390000006634
Goat	MODERN SPECIES	4	C20orf202 (ENSCHIG00000022210)	RAD21L1 (ENSCHIG00000022078)	SNPH (ENSCHIG00000022086)	SDCBP2 (ENSCHIG00000026727)	ENSCHIG00000008981	NSFL1C (ENSCHIG00000026320)	SIRPB2 (ENSCHIG00000020185)	ENSCHIG00000015868	ENSCHIG00000020130 #16	AURKA (ENSCHIG00000024453) #17	CSTF1 (ENSCHIG00000024686) #18	CASS4 (ENSCHIG00000025456) #19	GCNT7 (ENSCHIG00000011787) #21	RTF2 (ENSCHIG00000016795) #20	ENSCHIG00000011944	TFAP2C (ENSCHIG00000016251) #22	BMP7 (ENSCHIG00000009982) #23	SPO11 (ENSCHIG00000024033) #24	RAE1 (ENSCHIG00000021396) #25	RBM38 (ENSCHIG00000002609) #26	CTCFL (ENSCHIG00000012079) #27	PCK1 (ENSCHIG00000004184) #28	ENSCHIG00000006747 #29	PMEPA1 (ENSCHIG00000019681) #30	C20orf85 (ENSCHIG00000013954) #31	RAB22A (ENSCHIG00000017305) #34	VAPB (ENSCHIG00000023510) #35	APCDD1L (ENSCHIG00000008762) #36	STX16 (ENSCHIG00000015266) #37	NPEPL1 (ENSCHIG00000020605)	ENSCHIG00000004449
Rambouillet Sheep	MODERN SPECIES	4	PSMF1 (ENSOARG00020016930)	TMEM74B (ENSOARG00020016880)	C20orf202 (ENSOARG00020016836)	RAD21L1 (ENSOARG00020016432)	SDCBP2 (ENSOARG00020016367)	ENSOARG00020016172	NSFL1C (ENSOARG00020015987)	SIRPB2 (ENSOARG00020015924)	MC3R (ENSOARG00020015898)	FAM210B (ENSOARG00020015852) #16	AURKA (ENSOARG00020015608) #17	CSTF1 (ENSOARG00020015504) #18	GCNT7 (ENSOARG00020015320) #21	RTF2 (ENSOARG00020015268) #20	ENSOARG00020015232	TFAP2C (ENSOARG00020015147) #22	BMP7 (ENSOARG00020014945) #23	SPO11 (ENSOARG00020014512) #24	RAE1 (ENSOARG00020014456) #25	RBM38 (ENSOARG00020014327) #26	CTCFL (ENSOARG00020013572) #27	PCK1 (ENSOARG00020013457) #28	ENSOARG00020013373 #29	PMEPA1 (ENSOARG00020013298) #30	C20orf85 (ENSOARG00020013218) #31	RAB22A (ENSOARG00020013056) #34	VAPB (ENSOARG00020012959) #35	APCDD1L (ENSOARG00020012926) #36	STX16 (ENSOARG00020012241) #37	NPEPL1 (ENSOARG00020012021)	ENSOARG00020011940
Bovinae	ANCESTRAL SPECIES	23	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a.c	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057.g	ENSGT00390000015224.c.b.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Bos	ANCESTRAL SPECIES	24	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a.c	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00390000015224.c.b.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Bos_b	ANCESTRAL SPECIES	26	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.a	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00390000015224.c.b.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A	ENSGT00390000006634
Hybrid Bos Indicus	MODERN SPECIES	4	RAD21L1 (ENSBIXG00005024217)	ENSBIXG00005024112	SDCBP2 (ENSBIXG00005004119)	ENSBIXG00005023953	NSFL1C (ENSBIXG00005023940)	SIRPB2 (ENSBIXG00005023892)	MC3R (ENSBIXG00005023881)	FAM210B (ENSBIXG00005023861) #16	AURKA (ENSBIXG00005023837) #17	CSTF1 (ENSBIXG00005005882) #18	CASS4 (ENSBIXG00005023749) #19	RTF2 (ENSBIXG00005023694) #20	GCNT7 (ENSBIXG00005004050) #21	ENSBIXG00005023633	ENSBIXG00005023622	TFAP2C (ENSBIXG00005023582) #22	BMP7 (ENSBIXG00005023542) #23	SPO11 (ENSBIXG00005023438) #24	RAE1 (ENSBIXG00005023229) #25	PCK1 (ENSBIXG00005003950) #28	CTCFL (ENSBIXG00005022968) #27	ENSBIXG00005022901	ZBP1 (ENSBIXG00005007383) #29	PMEPA1 (ENSBIXG00005022840) #30	C20orf85 (ENSBIXG00005022794) #31	ENSBIXG00005022736	RAB22A (ENSBIXG00005022726) #34	ENSBIXG00005022707	VAPB (ENSBIXG00005022698) #35	APCDD1L (ENSBIXG00005006835) #36	STX16 (ENSBIXG00005007169) #37
Cow	MODERN SPECIES	4	SDCBP2 (ENSBTAG00000021321)	ENSBTAG00000052136	FKBP1A (ENSBTAG00000008303)	NSFL1C (ENSBTAG00000006533)	SIRPB2 (ENSBTAG00000006539)	SIRPD (ENSBTAG00000033397)	MC3R (ENSBTAG00000004712)	FAM210B (ENSBTAG00000013007) #16	AURKA (ENSBTAG00000013009) #17	CSTF1 (ENSBTAG00000006639) #18	CASS4 (ENSBTAG00000014555) #19	GCNT7 (ENSBTAG00000006243) #21	RTF2 (ENSBTAG00000027390) #20	FAM209A (ENSBTAG00000031462)	ENSBTAG00000024608	TFAP2C (ENSBTAG00000002065) #22	BMP7 (ENSBTAG00000015362) #23	SPO11 (ENSBTAG00000044210) #24	RAE1 (ENSBTAG00000010934) #25	RBM38 (ENSBTAG00000008105) #26	CTCFL (ENSBTAG00000013079) #27	PCK1 (ENSBTAG00000001936) #28	ZBP1 (ENSBTAG00000012406) #29	PMEPA1 (ENSBTAG00000054628) #30	ENSBTAG00000054668	C13H20orf85 (ENSBTAG00000016926) #31	ENSBTAG00000052305	RAB22A (ENSBTAG00000018053) #34	VAPB (ENSBTAG00000017424) #35	APCDD1L (ENSBTAG00000020397) #36	STX16 (ENSBTAG00000003872) #37
Bos_a	ANCESTRAL SPECIES	7	ENSGT00520000055634.b	ENSGT00940000161179	ENSGT00940000153311.a.b.a.i.b.a.c	ENSGT00520000055567.a.a.a	ENSGT00960000186656.a.b	ENSGT00960000186656.a.a.b	ENSGT01030000234510.a.a.a.a.b.e	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057.g	ENSGT00390000015224.c.b.a	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b.d #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Wild yak	MODERN SPECIES	119			SDCBP2 (ENSBMUG00000016215)	ENSBMUG00000016263	NSFL1C (ENSBMUG00000016322)	SIRPB2 (ENSBMUG00000016351)	ENSBMUG00000016366	MC3R (ENSBMUG00000016410)	FAM210B (ENSBMUG00000016427) #16	AURKA (ENSBMUG00000016455) #17	CSTF1 (ENSBMUG00000016523) #18	CASS4 (ENSBMUG00000016558) #19	RTF2 (ENSBMUG00000016577) #20	GCNT7 (ENSBMUG00000016592) #21	ENSBMUG00000016603	TFAP2C (ENSBMUG00000016627) #22	BMP7 (ENSBMUG00000016640) #23	SPO11 (ENSBMUG00000016729) #24	ENSBMUG00000016759 #25	RBM38 (ENSBMUG00000016782) #26	CTCFL (ENSBMUG00000016873) #27	PCK1 (ENSBMUG00000016967) #28	ZBP1 (ENSBMUG00000016977) #29	PMEPA1 (ENSBMUG00000016982) #30	C20orf85 (ENSBMUG00000016991) #31	ANKRD60 (ENSBMUG00000016999) #32	RAB22A (ENSBMUG00000017036) #34	VAPB (ENSBMUG00000017052) #35
Domestic yak	MODERN SPECIES	3	SNPH (ENSBGRG00000012380)	SDCBP2 (ENSBGRG00000012247)	ENSBGRG00000012031	NSFL1C (ENSBGRG00000011719)	SIRPB2 (ENSBGRG00000011673)	MC3R (ENSBGRG00000011613)	FAM210B (ENSBGRG00000011532) #16	AURKA (ENSBGRG00000011397) #17	ENSBGRG00000011378	CSTF1 (ENSBGRG00000011331) #18	CASS4 (ENSBGRG00000011222) #19	GCNT7 (ENSBGRG00000011133) #21	RTF2 (ENSBGRG00000010891) #20	ENSBGRG00000010860	ENSBGRG00000010827	TFAP2C (ENSBGRG00000010689) #22	BMP7 (ENSBGRG00000010612) #23	SPO11 (ENSBGRG00000010307) #24	ENSBGRG00000010143 #25	RBM38 (ENSBGRG00000010003) #26	CTCFL (ENSBGRG00000009589) #27	PCK1 (ENSBGRG00000009353) #28	ZBP1 (ENSBGRG00000009247) #29	PMEPA1 (ENSBGRG00000009167) #30	C20orf85 (ENSBGRG00000009150) #31	RAB22A (ENSBGRG00000008900) #34	VAPB (ENSBGRG00000008788) #35	APCDD1L (ENSBGRG00000008754) #36	STX16 (ENSBGRG00000008482) #37	NPEPL1 (ENSBGRG00000008119)	ENSBGRG00000025497
American bison	MODERN SPECIES	3089	RAD21L1 (ENSBBBG00000009638)	SNPH (ENSBBBG00000009630)	SDCBP2 (ENSBBBG00000009625)	ENSBBBG00000025481	NSFL1C (ENSBBBG00000025367)	SIRPB2 (ENSBBBG00000007856)	MC3R (ENSBBBG00000025338)	FAM210B (ENSBBBG00000008091) #16	AURKA (ENSBBBG00000025307) #17	CSTF1 (ENSBBBG00000025215) #18	CASS4 (ENSBBBG00000025195) #19	RTF2 (ENSBBBG00000006668) #20	GCNT7 (ENSBBBG00000025135) #21	ENSBBBG00000025120	ENSBBBG00000025115	TFAP2C (ENSBBBG00000007748) #22	BMP7 (ENSBBBG00000006644) #23	SPO11 (ENSBBBG00000025046) #24	RAE1 (ENSBBBG00000024949) #25	RBM38 (ENSBBBG00000024899) #26	CTCFL (ENSBBBG00000008049) #27	PCK1 (ENSBBBG00000006468) #28	ENSBBBG00000024674 #29	PMEPA1 (ENSBBBG00000024661) #30	C20orf85 (ENSBBBG00000000233) #31	ANKRD60 (ENSBBBG00000024644) #32	RAB22A (ENSBBBG00000006430) #34	VAPB (ENSBBBG00000024624) #35	APCDD1L (ENSBBBG00000000252) #36	STX16 (ENSBBBG00000009035) #37	NPEPL1 (ENSBBBG00000024507)
Siberian musk deer	MODERN SPECIES	1193	C20orf202 (ENSMMSG00000019524)	RAD21L1 (ENSMMSG00000019560)	SDCBP2 (ENSMMSG00000019715)	ENSMMSG00000019745	NSFL1C (ENSMMSG00000019782)	SIRPB2 (ENSMMSG00000019841)	ENSMMSG00000019862	ENSMMSG00000019880	FAM210B (ENSMMSG00000019888) #16	AURKA (ENSMMSG00000019919) #17	CSTF1 (ENSMMSG00000019970) #18	CASS4 (ENSMMSG00000019993) #19	RTF2 (ENSMMSG00000020042) #20	GCNT7 (ENSMMSG00000020064) #21	ENSMMSG00000020083	TFAP2C (ENSMMSG00000020093) #22	BMP7 (ENSMMSG00000020121) #23	SPO11 (ENSMMSG00000020191) #24	RAE1 (ENSMMSG00000020424) #25	RBM38 (ENSMMSG00000020472) #26	CTCFL (ENSMMSG00000020529) #27	PCK1 (ENSMMSG00000020967) #28	ENSMMSG00000021009 #29	PMEPA1 (ENSMMSG00000021093) #30	C20orf85 (ENSMMSG00000021117) #31	ENSMMSG00000021183 #34	VAPB (ENSMMSG00000021218) #35	APCDD1L (ENSMMSG00000017381) #36	STX16 (ENSMMSG00000017425) #37	NPEPL1 (ENSMMSG00000017675)	ENSMMSG00000017768
Yarkand deer	MODERN SPECIES	15	C20orf202 (ENSCHYG00000021610)	SNPH (ENSCHYG00000021365)	SDCBP2 (ENSCHYG00000021231)	ENSCHYG00000021051	ENSCHYG00000020847	SIRPB2 (ENSCHYG00000020774)	ENSCHYG00000020710	MC3R (ENSCHYG00000020674)	ENSCHYG00000020595 #16	AURKA (ENSCHYG00000020501) #17	CSTF1 (ENSCHYG00000020443) #18	CASS4 (ENSCHYG00000020270) #19	GCNT7 (ENSCHYG00000020206) #21	RTF2 (ENSCHYG00000020116) #20	ENSCHYG00000020096	TFAP2C (ENSCHYG00000019937) #22	ENSCHYG00000019890	BMP7 (ENSCHYG00000019388) #23	SPO11 (ENSCHYG00000018785) #24	ENSCHYG00000018647 #25	RBM38 (ENSCHYG00000018538) #26	CTCFL (ENSCHYG00000018291) #27	PCK1 (ENSCHYG00000018190) #28	ENSCHYG00000018137 #29	PMEPA1 (ENSCHYG00000018099) #30	C20orf85 (ENSCHYG00000018025) #31	RAB22A (ENSCHYG00000017863) #34	VAPB (ENSCHYG00000017763) #35	APCDD1L (ENSCHYG00000017700) #36	STX16 (ENSCHYG00000017190) #37	NPEPL1 (ENSCHYG00000016856)
Camelidae	ANCESTRAL SPECIES	10	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A	ENSGT00390000006634
Arabian camel	MODERN SPECIES	10	ENSCDRG00005016633 #9	ZNF217 (ENSCDRG00005016648) #10	BCAS1 (ENSCDRG00005016699) #11	CYP24A1 (ENSCDRG00005016933) #12	PFDN4 (ENSCDRG00005017062) #7	DOK5 (ENSCDRG00005017101)	CBLN4 (ENSCDRG00005017147) #13	MC3R (ENSCDRG00005017174)	FAM210B (ENSCDRG00005017188) #16	AURKA (ENSCDRG00005017220) #17	CSTF1 (ENSCDRG00005017255) #18	CASS4 (ENSCDRG00005017279) #19	RTF2 (ENSCDRG00005017316) #20	GCNT7 (ENSCDRG00005017452) #21	ENSCDRG00005017508	TFAP2C (ENSCDRG00005017528) #22	ENSCDRG00005017550	BMP7 (ENSCDRG00005017580) #23	SPO11 (ENSCDRG00005017688) #24	RAE1 (ENSCDRG00005018020) #25	RBM38 (ENSCDRG00005018053) #26	CTCFL (ENSCDRG00005018103) #27	PCK1 (ENSCDRG00005018483) #28	ZBP1 (ENSCDRG00005018520) #29	PMEPA1 (ENSCDRG00005018556) #30	C20orf85 (ENSCDRG00005018603) #31	RAB22A (ENSCDRG00005018654) #34	VAPB (ENSCDRG00005018685) #35	APCDD1L (ENSCDRG00005018710) #36	STX16 (ENSCDRG00005018768) #37	NPEPL1 (ENSCDRG00005019177)
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Carnivora	ANCESTRAL SPECIES	20	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Caniformia	ANCESTRAL SPECIES		ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Canidae	ANCESTRAL SPECIES	41	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb.a #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.ab #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb.a #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Dingo	MODERN SPECIES	343	ENSCAFG00020021892 #9	ZNF217 (ENSCAFG00020021894) #10	BCAS1 (ENSCAFG00020021900) #11	CYP24A1 (ENSCAFG00020021905) #12	ENSCAFG00020021915 #7	DOK5 (ENSCAFG00020021917)	CBLN4 (ENSCAFG00020021919) #13	MC3R (ENSCAFG00020021920)	FAM210B (ENSCAFG00020021921) #16	ENSCAFG00020021922 #17	CSTF1 (ENSCAFG00020021923) #18	CASS4 (ENSCAFG00020021924) #19	RTF2 (ENSCAFG00020021926) #20	GCNT7 (ENSCAFG00020021927) #21	ENSCAFG00020021929	TFAP2C (ENSCAFG00020021932) #22	ENSCAFG00020021939 #23	SPO11 (ENSCAFG00020021940) #24	RAE1 (ENSCAFG00020021942) #25	RBM38 (ENSCAFG00020021943) #26	CTCFL (ENSCAFG00020021957) #27	PCK1 (ENSCAFG00020021997) #28	ENSCAFG00020022005 #29	PMEPA1 (ENSCAFG00020022009) #30	C20orf85 (ENSCAFG00020022012) #31	ENSCAFG00020022016 #33	RAB22A (ENSCAFG00020022020) #34	VAPB (ENSCAFG00020022022) #35	APCDD1L (ENSCAFG00020022024) #36	STX16 (ENSCAFG00020022029) #37	NPEPL1 (ENSCAFG00020022035)
Dog	MODERN SPECIES	16	ENSCAFG00845028117 #9	ZNF217 (ENSCAFG00845028152) #10	BCAS1 (ENSCAFG00845028476) #11	CYP24A1 (ENSCAFG00845028958) #12	ENSCAFG00845029028 #7	DOK5 (ENSCAFG00845029068)	CBLN4 (ENSCAFG00845029097) #13	MC3R (ENSCAFG00845029148)	FAM210B (ENSCAFG00845029164) #16	ENSCAFG00845029207 #17	CSTF1 (ENSCAFG00845029253) #18	CASS4 (ENSCAFG00845029281) #19	RTF2 (ENSCAFG00845029371) #20	GCNT7 (ENSCAFG00845029505) #21	ENSCAFG00845029529	TFAP2C (ENSCAFG00845029577) #22	BMP7 (ENSCAFG00845029691) #23	ENSCAFG00845029786	RAE1 (ENSCAFG00845029836) #24	RBM38 (ENSCAFG00845029906) #26	CTCFL (ENSCAFG00845029950) #27	PCK1 (ENSCAFG00845029983) #28	ENSCAFG00845012986 #29	PMEPA1 (ENSCAFG00845013029) #30	C24H20orf85 (ENSCAFG00845013121) #31	ENSCAFG00845013178 #33	RAB22A (ENSCAFG00845013330) #34	VAPB (ENSCAFG00845013414) #35	APCDD1L (ENSCAFG00845013480) #36	STX16 (ENSCAFG00845013527) #37	NPEPL1 (ENSCAFG00845013592)
Red fox	MODERN SPECIES	108							CBLN4 (ENSVVUG00000017416) #13	MC3R (ENSVVUG00000017404)	FAM210B (ENSVVUG00000017391) #16	AURKA (ENSVVUG00000017355) #17	CSTF1 (ENSVVUG00000017348) #18	CASS4 (ENSVVUG00000017340) #19	RTF2 (ENSVVUG00000017332) #20	GCNT7 (ENSVVUG00000017328) #21	FAM209B (ENSVVUG00000017324)	TFAP2C (ENSVVUG00000017309) #22	BMP7 (ENSVVUG00000017291) #23	SPO11 (ENSVVUG00000017270) #24	RAE1 (ENSVVUG00000017251) #25	RBM38 (ENSVVUG00000017246) #26	CTCFL (ENSVVUG00000017226) #27	PCK1 (ENSVVUG00000017220) #28	ENSVVUG00000017189 #29	PMEPA1 (ENSVVUG00000017183) #30	ENSVVUG00000017166	ANKRD60 (ENSVVUG00000017159) #32	ENSVVUG00000017120 #33	RAB22A (ENSVVUG00000017111) #34	VAPB (ENSVVUG00000017103) #35	APCDD1L (ENSVVUG00000017099) #36	STX16 (ENSVVUG00000017086) #37
Caniformia_b	ANCESTRAL SPECIES		ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Mustelinae	ANCESTRAL SPECIES	58	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00940000157009 #34	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
American mink	MODERN SPECIES	82	ZNF217 (ENSNVIG00000022614) #10	BCAS1 (ENSNVIG00000022589) #11	CYP24A1 (ENSNVIG00000022568) #12	PFD4 (ENSNVIG00000022561) #7	DOK5 (ENSNVIG00000022551)	ENSNVIG00000022545	CBLN4 (ENSNVIG00000022537) #13	MC3R (ENSNVIG00000022532)	FAM210B (ENSNVIG00000022528) #16	AURKA (ENSNVIG00000022500) #17	CSTF1 (ENSNVIG00000022484) #18	CASS4 (ENSNVIG00000022461) #19	GCNT7 (ENSNVIG00000022451) #21	RTF2 (ENSNVIG00000022403) #20	ENSNVIG00000022396	TFAP2C (ENSNVIG00000022382) #22	E9PH02 (ENSNVIG00000022373) #23	ENSNVIG00000022363 #23	SPO11 (ENSNVIG00000022339) #24	RAE1 (ENSNVIG00000022326) #25	RBM38 (ENSNVIG00000022316) #26	CTCFL (ENSNVIG00000022269) #27	PCK1 (ENSNVIG00000022258) #28	ENSNVIG00000022232 #29	PMEPA1 (ENSNVIG00000022209) #30	CT085 (ENSNVIG00000022202) #31	ENSNVIG00000022126 #33	RB22A (ENSNVIG00000022120) #34	VAPB (ENSNVIG00000022108) #35	APCDD1L (ENSNVIG00000022092) #36	STX16 (ENSNVIG00000022063) #37
Ferret	MODERN SPECIES	236	ZNF217 (ENSMPUG00000006142) #10	BCAS1 (ENSMPUG00000006155) #11	CYP24A1 (ENSMPUG00000006168) #12	PFDN4 (ENSMPUG00000006173) #7	DOK5 (ENSMPUG00000006202)	CBLN4 (ENSMPUG00000006215) #13	MC3R (ENSMPUG00000020172)	ENSMPUG00000020173	FAM210B (ENSMPUG00000006225) #16	AURKA (ENSMPUG00000006233) #17	CSTF1 (ENSMPUG00000006243) #18	CASS4 (ENSMPUG00000006337) #19	RTF2 (ENSMPUG00000006344) #20	GCNT7 (ENSMPUG00000006358) #21	ENSMPUG00000006379	TFAP2C (ENSMPUG00000006387) #22	ENSMPUG00000006472	BMP7 (ENSMPUG00000006477) #23	SPO11 (ENSMPUG00000006486) #24	ENSMPUG00000006499	RAE1 (ENSMPUG00000006504) #25	RBM38 (ENSMPUG00000006518) #26	CTCFL (ENSMPUG00000006570) #27	ENSMPUG00000006657	PCK1 (ENSMPUG00000006661) #28	ENSMPUG00000006670 #29	PMEPA1 (ENSMPUG00000006677) #30	ENSMPUG00000006684	C20orf85 (ENSMPUG00000006689) #31	ANKRD60 (ENSMPUG00000006694) #32	RAB22A (ENSMPUG00000006703) #34
Ursidae	ANCESTRAL SPECIES	14	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Ursus	ANCESTRAL SPECIES	152							ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900.cb #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
American black bear	MODERN SPECIES	481												RTF2 (ENSUAMG00000017574) #20	ENSUAMG00000017579 #21	ENSUAMG00000017581	ENSUAMG00000017582	TFAP2C (ENSUAMG00000017592) #22	ENSUAMG00000017597 #23
Polar bear	MODERN SPECIES	219							CBLN4 (ENSUMAG00000002743) #13	MC3R (ENSUMAG00000002734)	FAM210B (ENSUMAG00000002731) #16	AURKA (ENSUMAG00000002729) #17	CSTF1 (ENSUMAG00000002726) #18	CASS4 (ENSUMAG00000002722) #19	GCNT7 (ENSUMAG00000002711) #21	RTF2 (ENSUMAG00000002707) #20	ENSUMAG00000002703	TFAP2C (ENSUMAG00000002685) #22	ENSUMAG00000002676 #23	SPO11 (ENSUMAG00000002655) #24	RAE1 (ENSUMAG00000002648) #25	ENSUMAG00000002640 #26	ENSUMAG00000002621 #27	PCK1 (ENSUMAG00000002607) #28	ZBP1 (ENSUMAG00000002600) #29	C20orf85 (ENSUMAG00000002586) #31	ENSUMAG00000002566 #33	RAB22A (ENSUMAG00000002535) #34	VAPB (ENSUMAG00000002503) #35	APCDD1L (ENSUMAG00000002494) #36	STX16 (ENSUMAG00000002487) #37	NPEPL1 (ENSUMAG00000002343)	ENSUMAG00000002311
Giant Panda	MODERN SPECIES	4	ENSAMEG00000019927 #9	ZNF217 (ENSAMEG00000013231) #10	BCAS1 (ENSAMEG00000013223) #11	CYP24A1 (ENSAMEG00000013169) #12	PFDN4 (ENSAMEG00000013164) #7	DOK5 (ENSAMEG00000013163)	ENSAMEG00000019489	CBLN4 (ENSAMEG00000027847) #13	MC3R (ENSAMEG00000019471)	FAM210B (ENSAMEG00000029051) #16	AURKA (ENSAMEG00000007168) #17	CASS4 (ENSAMEG00000007113) #19	GCNT7 (ENSAMEG00000007103) #21	RTF2 (ENSAMEG00000007072) #20	ENSAMEG00000007066	TFAP2C (ENSAMEG00000007037) #22	BMP7 (ENSAMEG00000012817) #23	SPO11 (ENSAMEG00000012813) #24	RAE1 (ENSAMEG00000012789) #25	RBM38 (ENSAMEG00000028405) #26	CTCFL (ENSAMEG00000012766) #27	PCK1 (ENSAMEG00000012718) #28	ENSAMEG00000029261 #29	PMEPA1 (ENSAMEG00000012698) #30	C20orf85 (ENSAMEG00000024288) #31	ENSAMEG00000012659 #33	RAB22A (ENSAMEG00000012646) #34	VAPB (ENSAMEG00000012630) #35	APCDD1L (ENSAMEG00000030490) #36	STX16 (ENSAMEG00000012597) #37	NPEPL1 (ENSAMEG00000012570)
Felidae	ANCESTRAL SPECIES	3	ENSGT00950000183051.a.b	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.cb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00950000183051.a.b	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.cb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Tiger	MODERN SPECIES	253	TSHZ2 (ENSPTIG00000007834)	ZNF217 (ENSPTIG00000005463) #10	BCAS1 (ENSPTIG00000020298) #11	CYP24A1 (ENSPTIG00000018918) #12	ENSPTIG00000018209 #7	DOK5 (ENSPTIG00000017461)	CBLN4 (ENSPTIG00000017065) #13	MC3R (ENSPTIG00000001341)	FAM210B (ENSPTIG00000015174) #16	AURKA (ENSPTIG00000012737) #17	CSTF1 (ENSPTIG00000012174) #18	CASS4 (ENSPTIG00000009122) #19	GCNT7 (ENSPTIG00000007809) #21	RTF2 (ENSPTIG00000003720) #20	ENSPTIG00000021739	TFAP2C (ENSPTIG00000021497) #22	BMP7 (ENSPTIG00000020525) #23	SPO11 (ENSPTIG00000017033) #24	RAE1 (ENSPTIG00000014648) #25	ENSPTIG00000013448 #26	ENSPTIG00000013064 #27	PCK1 (ENSPTIG00000012521) #28	ENSPTIG00000011495 #29	C20orf85 (ENSPTIG00000011178) #31	ENSPTIG00000009510 #33	RAB22A (ENSPTIG00000007752) #34	VAPB (ENSPTIG00000006830) #35	STX16 (ENSPTIG00000018391) #37	NPEPL1 (ENSPTIG00000016930)	ENSPTIG00000015863	GNAS (ENSPTIG00000013655)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00950000183051.a.b	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696.cb #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
leopard	MODERN SPECIES	32	TSHZ2 (ENSPPRG00000013365)	ZNF217 (ENSPPRG00000014025) #10	BCAS1 (ENSPPRG00000015142) #11	CYP24A1 (ENSPPRG00000024597) #12	ENSPPRG00000024512 #7	DOK5 (ENSPPRG00000024034)	CBLN4 (ENSPPRG00000023868) #13	MC3R (ENSPPRG00000017600)	FAM210B (ENSPPRG00000023782) #16	AURKA (ENSPPRG00000000440) #17	CSTF1 (ENSPPRG00000000733) #18	CASS4 (ENSPPRG00000001534) #19	GCNT7 (ENSPPRG00000001763) #21	RTF2 (ENSPPRG00000005166) #20	ENSPPRG00000006287	TFAP2C (ENSPPRG00000006375) #22
lion	MODERN SPECIES	3	ZFP64 (ENSPLOG00000003449)	TSHZ2 (ENSPLOG00000003471)	ZNF217 (ENSPLOG00000003494) #10	BCAS1 (ENSPLOG00000003532) #11	ENSPLOG00000003567 #7	DOK5 (ENSPLOG00000003578)	CBLN4 (ENSPLOG00000003605) #13	MC3R (ENSPLOG00000003615)	FAM210B (ENSPLOG00000003624) #16	AURKA (ENSPLOG00000003634) #17	CSTF1 (ENSPLOG00000003647) #18	CASS4 (ENSPLOG00000003663) #19	RTF2 (ENSPLOG00000003723) #20	GCNT7 (ENSPLOG00000003785) #21	ENSPLOG00000003801	TFAP2C (ENSPLOG00000003814) #22	BMP7 (ENSPLOG00000003845) #23	SPO11 (ENSPLOG00000003903) #24	RAE1 (ENSPLOG00000003947) #25	RBM38 (ENSPLOG00000003968) #26	CTCFL (ENSPLOG00000010795) #27	PCK1 (ENSPLOG00000010911) #28	ENSPLOG00000010977 #29	PMEPA1 (ENSPLOG00000010999) #30	C20orf85 (ENSPLOG00000011071) #31	ENSPLOG00000011220 #33	RAB22A (ENSPLOG00000011258) #34	VAPB (ENSPLOG00000011298) #35	APCDD1L (ENSPLOG00000011344) #36	STX16 (ENSPLOG00000011475) #37	NPEPL1 (ENSPLOG00000011712)
Cat	MODERN SPECIES	2	ZFP64 (ENSFCAG00000011815)	TSHZ2 (ENSFCAG00000014616)	ZNF217 (ENSFCAG00000029845) #10	BCAS1 (ENSFCAG00000002451) #11	CYP24A1 (ENSFCAG00000002452) #12	PFDN4 (ENSFCAG00000013355) #7	DOK5 (ENSFCAG00000007809)	CBLN4 (ENSFCAG00000042415) #13	MC3R (ENSFCAG00000007053)	FAM210B (ENSFCAG00000044679) #16	AURKA (ENSFCAG00000024493) #17	CSTF1 (ENSFCAG00000025673) #18	CASS4 (ENSFCAG00000005548) #19	GCNT7 (ENSFCAG00000005550) #21	RTF2 (ENSFCAG00000037890) #20	TFAP2C (ENSFCAG00000005551) #22	ENSFCAG00000053180 #23	SPO11 (ENSFCAG00000041965) #24	RBM38 (ENSFCAG00000042916) #26	CTCFL (ENSFCAG00000031045) #27	PCK1 (ENSFCAG00000000419) #28	ZBP1 (ENSFCAG00000000420) #29	PMEPA1 (ENSFCAG00000025692) #30	CA3H20orf85 (ENSFCAG00000026868) #31	ANKRD60 (ENSFCAG00000041149) #32	ENSFCAG00000019082 #33	RAB22A (ENSFCAG00000046416) #34	VAPB (ENSFCAG00000009291) #35	APCDD1L (ENSFCAG00000009293) #36	STX16 (ENSFCAG00000033013) #37	NPEPL1 (ENSFCAG00000030941)
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	MODERN SPECIES	999	ENSMLUG00000028502	ENSMLUG00000013443	ARID5B (ENSMLUG00000013447)	RTKN2 (ENSMLUG00000013452)	ZNF365 (ENSMLUG00000013458)	ADO (ENSMLUG00000001506)	NRBF2 (ENSMLUG00000001657)	JMJD1C (ENSMLUG00000025318)	REEP3 (ENSMLUG00000012958)	ENSMLUG00000025764	ENSMLUG00000005829	ENSMLUG00000011867	ENSMLUG00000008149	LRRTM3 (ENSMLUG00000011887)	ENSMLUG00000025662	ENSMLUG00000012846 #22	ENSMLUG00000024093	ENSMLUG00000023509	DNAJC12 (ENSMLUG00000007162)	SIRT1 (ENSMLUG00000004285)	HERC4 (ENSMLUG00000004291)	MYPN (ENSMLUG00000012496)	PBLD (ENSMLUG00000000140)	HNRNPH3 (ENSMLUG00000000143)	RUFY2 (ENSMLUG00000000150)	ENSMLUG00000015224
Microbat	MODERN SPECIES	1006										ENSMLUG00000024102	POLR3A (ENSMLUG00000011522)	DLG5 (ENSMLUG00000011460)	KCNMA1 (ENSMLUG00000005723)	ENSMLUG00000022493	LRMDA (ENSMLUG00000009477)	ENSMLUG00000003304 #22	ZNF503 (ENSMLUG00000012474)	COMTD1 (ENSMLUG00000007523)	VDAC2 (ENSMLUG00000007500)	SAMD8 (ENSMLUG00000007486)	ENSMLUG00000028391	DUSP13 (ENSMLUG00000007480)	DUSP29 (ENSMLUG00000007469)	KAT6B (ENSMLUG00000007438)	ADK (ENSMLUG00000003709)	AP3M1 (ENSMLUG00000003703)	VCL (ENSMLUG00000009809)	PLAU (ENSMLUG00000012801)	CAMK2G (ENSMLUG00000012781)	NDST2 (ENSMLUG00000012766)	ZSWIM8 (ENSMLUG00000028244)
Microbat	MODERN SPECIES	986																ENSMLUG00000016754 #22	ENSMLUG00000024069	FRMPD4 (ENSMLUG00000012730)	ENSMLUG00000012741	TLR7 (ENSMLUG00000003912)	TLR8 (ENSMLUG00000012745)	EGFL6 (ENSMLUG00000028848)	RAB9A (ENSMLUG00000012661)	ENSMLUG00000012665	OFD1 (ENSMLUG00000012673)	GPM6B (ENSMLUG00000013764)	ENSMLUG00000010141	GLRA2 (ENSMLUG00000015270)	ENSMLUG00000015275	MOSPD2 (ENSMLUG00000015281)	ASB9 (ENSMLUG00000017696)
Microbat	MODERN SPECIES	1170															ENSMLUG00000000181	ENSMLUG00000029465 #22	ENSMLUG00000024123	ENSMLUG00000027971
Microbat	MODERN SPECIES	937	HOMER1 (ENSMLUG00000010972)	JMY (ENSMLUG00000000275)	BHMT (ENSMLUG00000009164)	BHMT2 (ENSMLUG00000009152)	DMGDH (ENSMLUG00000009128)	ARSB (ENSMLUG00000001949)	LHFPL2 (ENSMLUG00000006700)	SCAMP1 (ENSMLUG00000006679)	AP3B1 (ENSMLUG00000006637)	TBCA (ENSMLUG00000001087)	OTP (ENSMLUG00000028781)	WDR41 (ENSMLUG00000016814)	PDE8B (ENSMLUG00000016798)	AGGF1 (ENSMLUG00000016792)	CRHBP (ENSMLUG00000025557)	ENSMLUG00000006790 #22	F2R (ENSMLUG00000029641)	IQGAP2 (ENSMLUG00000006695)	F2RL2 (ENSMLUG00000006767)	SV2C (ENSMLUG00000006658)	POC5 (ENSMLUG00000015701)	ANKDD1B (ENSMLUG00000015695)	POLK (ENSMLUG00000015681)	CERT1 (ENSMLUG00000004251)	HMGCR (ENSMLUG00000004238)	GCNT4 (ENSMLUG00000003938)	FAM169A (ENSMLUG00000014466)	ENSMLUG00000014464	GFM2 (ENSMLUG00000004761)	HEXB (ENSMLUG00000004748)	ENC1 (ENSMLUG00000004745)
Microbat	MODERN SPECIES	1092					DOK5 (ENSMLUG00000009108)	CBLN4 (ENSMLUG00000009001) #13	ENSMLUG00000024112	MC3R (ENSMLUG00000009522)	FAM210B (ENSMLUG00000030626) #16	AURKA (ENSMLUG00000007925) #17	ENSMLUG00000026268 #18	ENSMLUG00000025039	CASS4 (ENSMLUG00000010197) #19	RTF2 (ENSMLUG00000005331) #20	ENSMLUG00000005333	ENSMLUG00000010003 #22	ENSMLUG00000022246	BMP7 (ENSMLUG00000014292) #23	SPO11 (ENSMLUG00000011081) #24	RAE1 (ENSMLUG00000011112) #25	RBM38 (ENSMLUG00000011140) #26	ENSMLUG00000011016 #27	PCK1 (ENSMLUG00000011043) #28	ENSMLUG00000017020 #29	PMEPA1 (ENSMLUG00000011071) #30	C20orf85 (ENSMLUG00000000729) #31	ENSMLUG00000000739 #33	RAB22A (ENSMLUG00000008605) #34	VAPB (ENSMLUG00000008619) #35	APCDD1L (ENSMLUG00000006450) #36	STX16 (ENSMLUG00000024716) #37
Greater horseshoe bat	MODERN SPECIES	15	ZNF217 (ENSRFEG00010012136) #10	BCAS1 (ENSRFEG00010011942) #11	CYP24A1 (ENSRFEG00010011474) #12	PFDN4 (ENSRFEG00010011415) #7	ENSRFEG00010011339	DOK5 (ENSRFEG00010011259)	CBLN4 (ENSRFEG00010011203) #13	MC3R (ENSRFEG00010021575)	FAM210B (ENSRFEG00010021572) #16	AURKA (ENSRFEG00010021556) #17	CSTF1 (ENSRFEG00010021540) #18	CASS4 (ENSRFEG00010021526) #19	GCNT7 (ENSRFEG00010021518) #21	RTF2 (ENSRFEG00010021502) #20	ENSRFEG00010021483	TFAP2C (ENSRFEG00010021478) #22	BMP7 (ENSRFEG00010021458) #23	SPO11 (ENSRFEG00010021432) #24	RAE1 (ENSRFEG00010021402) #25	RBM38 (ENSRFEG00010021393) #26	CTCFL (ENSRFEG00010021324) #27	PCK1 (ENSRFEG00010021269) #28	ENSRFEG00010021252 #29	PMEPA1 (ENSRFEG00010021235) #30	C20orf85 (ENSRFEG00010021221) #31	ANKRD60 (ENSRFEG00010021217) #32	ENSRFEG00010021190 #33	RAB22A (ENSRFEG00010021173) #34	VAPB (ENSRFEG00010021154) #35	APCDD1L (ENSRFEG00010021146) #36	NPEPL1 (ENSRFEG00010021063)
Megabat	MODERN SPECIES	8066																TFAP2C (ENSPVAG00000015403) #22
Equus	ANCESTRAL SPECIES	8	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Horse	MODERN SPECIES	14	ZNF217 (ENSECAG00000011966) #10	BCAS1 (ENSECAG00000013155) #11	CYP24A1 (ENSECAG00000016322) #12	ENSECAG00000053968	PFDN4 (ENSECAG00000035072) #7	DOK5 (ENSECAG00000023012)	CBLN4 (ENSECAG00000036307) #13	MC3R (ENSECAG00000004637)	AURKA (ENSECAG00000023961) #17	FAM210B (ENSECAG00000023915) #16	CSTF1 (ENSECAG00000008949) #18	CASS4 (ENSECAG00000009479) #19	RTF2 (ENSECAG00000009943) #20	GCNT7 (ENSECAG00000016323) #21	ENSECAG00000021060	TFAP2C (ENSECAG00000021125) #22	BMP7 (ENSECAG00000002918) #23	ENSECAG00000038425	SPO11 (ENSECAG00000012964) #24	RAE1 (ENSECAG00000016068) #25	ENSECAG00000054153	RBM38 (ENSECAG00000007700) #26	CTCFL (ENSECAG00000009147) #27	PCK1 (ENSECAG00000014037) #28	ZBP1 (ENSECAG00000017185) #29	PMEPA1 (ENSECAG00000018005) #30	ENSECAG00000047328	C22H20orf85 (ENSECAG00000033931) #31	ENSECAG00000022603 #33	RAB22A (ENSECAG00000012914) #34	VAPB (ENSECAG00000013265) #35
Donkey	MODERN SPECIES	6	ENSEASG00005023284 #9	ZNF217 (ENSEASG00005023283) #10	BCAS1 (ENSEASG00005023282) #11	CYP24A1 (ENSEASG00005023280) #12	PFDN4 (ENSEASG00005023279) #7	DOK5 (ENSEASG00005023278)	CBLN4 (ENSEASG00005023277) #13	MC3R (ENSEASG00005023275)	FAM210B (ENSEASG00005023274) #16	AURKA (ENSEASG00005023273) #17	CSTF1 (ENSEASG00005023272) #18	CASS4 (ENSEASG00005023271) #19	RTF2 (ENSEASG00005028295) #20	ENSEASG00005037027 #21	ENSEASG00005025474	TFAP2C (ENSEASG00005023267) #22	BMP7 (ENSEASG00005023265) #23	ENSEASG00005038095	SPO11 (ENSEASG00005023264) #24	RAE1 (ENSEASG00005023263) #25	ENSEASG00005025783	RBM38 (ENSEASG00005024107) #26	CTCFL (ENSEASG00005023260) #27	PCK1 (ENSEASG00005023259) #28	ENSEASG00005023257 #29	PMEPA1 (ENSEASG00005038369) #30	C20orf85 (ENSEASG00005027641) #31	ANKRD60 (ENSEASG00005029228) #32	ENSEASG00005023253 #33	RAB22A (ENSEASG00005026275) #34	VAPB (ENSEASG00005023251) #35
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000171528	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Afrotheria	ANCESTRAL SPECIES	85	ENSGT00950000183051.a.b	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000171528	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Tenrec	MODERN SPECIES	27																ENSETEG00000012914 #22
Afrotheria_a	ANCESTRAL SPECIES	87	ENSGT00950000183051.a.b	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000002234 #29	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000171528	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36
Hyrax	MODERN SPECIES	7670																TFAP2C (ENSPCAG00000006451) #22
Elephant	MODERN SPECIES	551	ZNF217 (ENSLAFG00000017592) #10	BCAS1 (ENSLAFG00000002312) #11	CYP24A1 (ENSLAFG00000017059) #12	PFDN4 (ENSLAFG00000017064) #7	DOK5 (ENSLAFG00000030432)	ENSLAFG00000031183	CBLN4 (ENSLAFG00000004861) #13	MC3R (ENSLAFG00000005954)	FAM210B (ENSLAFG00000008388) #16	AURKA (ENSLAFG00000008392) #17	CSTF1 (ENSLAFG00000008393) #18	CASS4 (ENSLAFG00000008394) #19	RTF2 (ENSLAFG00000008399) #20	GCNT7 (ENSLAFG00000031589) #21	ENSLAFG00000020518	TFAP2C (ENSLAFG00000007788) #22	ENSLAFG00000006475	BMP7 (ENSLAFG00000006468) #23	SPO11 (ENSLAFG00000015320) #24	RAE1 (ENSLAFG00000004501) #25	RBM38 (ENSLAFG00000032066) #26	CTCFL (ENSLAFG00000009261) #27	PCK1 (ENSLAFG00000009266) #28	ENSLAFG00000011094 #29	PMEPA1 (ENSLAFG00000028967) #30	C20orf85 (ENSLAFG00000026523) #31	ENSLAFG00000014475 #32	ENSLAFG00000006238 #33	RAB22A (ENSLAFG00000003688) #34	VAPB (ENSLAFG00000006148) #35	APCDD1L (ENSLAFG00000031497) #36
Xenarthra	ANCESTRAL SPECIES																	ENSGT00950000182848.c.b.a.b #22
Sloth	MODERN SPECIES	10688																TFAP2C (ENSCHOG00000011025) #22
Armadillo	MODERN SPECIES	1733							ENSDNOG00000040398	ENSDNOG00000031000	ENSDNOG00000031286	ENSDNOG00000038966	ENSDNOG00000039962	ENSDNOG00000045118	ENSDNOG00000034874	ENSDNOG00000048990	ENSDNOG00000033838	TFAP2C (ENSDNOG00000014671) #22
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT00940000165811	ENSGT00940000167176	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00390000005057	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT00940000167176	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00390000010923 #20	ENSGT00940000160402 #21	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00980000202953	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00950000183051.a.b	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00950000183051.a.b	ENSGT00560000078660 #9	ENSGT00940000159884 #10	ENSGT00390000003167 #11	ENSGT00950000182905.b #12	ENSGT00390000006696 #7	ENSGT00940000160725	ENSGT00940000159728 #13	ENSGT01030000234510.a.a.a.a.b	ENSGT00940000156134 #16	ENSGT00940000154900 #17	ENSGT00910000144253 #18	ENSGT00950000183008.a.a.a.a #19	ENSGT00940000160402 #21	ENSGT00390000010923 #20	ENSGT00950000182848.c.b.a.b #22	ENSGT00940000156490 #23	ENSGT00390000001787 #24	ENSGT00950000183091.B.b.b #25	ENSGT00940000158489 #26	ENSGT00940000161524 #27	ENSGT00390000001912.f #28	ENSGT00390000000724.c.a #30	ENSGT00940000154459.A #31	ENSGT00390000015137 #32	ENSGT00950000183066.a.b.a.b #33	ENSGT00940000157009 #34	ENSGT00940000155769 #35	ENSGT00640000091492.b #36	ENSGT01000000214440.B #37	ENSGT00530000063255.A
Common wonbat	MODERN SPECIES	35	ENSVURG00010018729 #9	ZNF217 (ENSVURG00010018725) #10	ENSVURG00010018716 #11	CYP24A1 (ENSVURG00010018690) #12	PFDN4 (ENSVURG00010018680) #7	DOK5 (ENSVURG00010018666)	ENSVURG00010018660	CBLN4 (ENSVURG00010018658) #13	MC3R (ENSVURG00010018648)	FAM210B (ENSVURG00010018643) #16	AURKA (ENSVURG00010018636) #17	CSTF1 (ENSVURG00010018632) #18	CASS4 (ENSVURG00010018629) #19	ENSVURG00010018623 #21	RTF2 (ENSVURG00010018611) #20	TFAP2C (ENSVURG00010018603) #22	BMP7 (ENSVURG00010018589) #23	SPO11 (ENSVURG00010018551) #24	RAE1 (ENSVURG00010018539) #25	RBM38 (ENSVURG00010018536) #26	ENSVURG00010018530 #27	PCK1 (ENSVURG00010018520) #28	PMEPA1 (ENSVURG00010018513) #30	C20orf85 (ENSVURG00010018496) #31	ENSVURG00010018488 #33	RAB22A (ENSVURG00010018482) #34	VAPB (ENSVURG00010018478) #35	APCDD1L (ENSVURG00010018473) #36	STX16 (ENSVURG00010018432) #37	NPEPL1 (ENSVURG00010018402)	GNAS (ENSVURG00010018387)
koala	MODERN SPECIES	11										ENSPCIG00000009225 #16	AURKA (ENSPCIG00000027333) #17	CSTF1 (ENSPCIG00000027334) #18	CASS4 (ENSPCIG00000027335) #19	RTF2 (ENSPCIG00000027337) #20	ENSPCIG00000027339 #21	TFAP2C (ENSPCIG00000027341) #22	BMP7 (ENSPCIG00000013634) #23	SPO11 (ENSPCIG00000013637) #24	RAE1 (ENSPCIG00000013644) #25	RBM38 (ENSPCIG00000013648) #26	CTCFL (ENSPCIG00000013656) #27	ENSPCIG00000013662 #28	PMEPA1 (ENSPCIG00000035085) #30	C20orf85 (ENSPCIG00000003242) #31	ENSPCIG00000004764 #32	ENSPCIG00000004738 #33	RAB22A (ENSPCIG00000004714) #34	VAPB (ENSPCIG00000004704) #35	APCDD1L (ENSPCIG00000004685) #36	STX16 (ENSPCIG00000004674) #37	NPEPL1 (ENSPCIG00000004660)
Wallaby	MODERN SPECIES	550																TFAP2C (ENSMEUG00000007703) #22
Tasmanian devil	MODERN SPECIES	1	ZNF217 (ENSSHAG00000030424) #10	BCAS1 (ENSSHAG00000012411) #11	CYP24A1 (ENSSHAG00000011826) #12	PFDN4 (ENSSHAG00000024204) #7	DOK5 (ENSSHAG00000008979)	ENSSHAG00000015205	CBLN4 (ENSSHAG00000021656) #13	ENSSHAG00000028803	MC3R (ENSSHAG00000030709)	FAM210B (ENSSHAG00000030459) #16	AURKA (ENSSHAG00000021349) #17	CSTF1 (ENSSHAG00000013103) #18	CASS4 (ENSSHAG00000012669) #19	RTF2 (ENSSHAG00000012236) #20	ENSSHAG00000012427 #21	TFAP2C (ENSSHAG00000011591) #22	BMP7 (ENSSHAG00000031864) #23	ENSSHAG00000030841	SPO11 (ENSSHAG00000000680) #24	RAE1 (ENSSHAG00000025272) #25	RBM38 (ENSSHAG00000028982) #26	ENSSHAG00000013360 #27	PCK1 (ENSSHAG00000012814) #28	PMEPA1 (ENSSHAG00000011418) #30	ENSSHAG00000028430	C20orf85 (ENSSHAG00000001817) #31	ENSSHAG00000016343 #33	RAB22A (ENSSHAG00000016302) #34	VAPB (ENSSHAG00000016115) #35	APCDD1L (ENSSHAG00000025329) #36	STX16 (ENSSHAG00000015293) #37
Opossum	MODERN SPECIES		ENSMODG00000040608	ENSMODG00000025116	ENSMODG00000039226	ENSMODG00000038379	CBLN4 (ENSMODG00000016410) #13	ENSMODG00000027399	MC3R (ENSMODG00000016430)	ENSMODG00000046314 #16	AURKA (ENSMODG00000016435) #17	CSTF1 (ENSMODG00000016436) #18	ENSMODG00000045993	CASS4 (ENSMODG00000016439) #19	ENSMODG00000016441 #21	RTF2 (ENSMODG00000045867) #20	RTF2 (ENSMODG00000042098)	TFAP2C (ENSMODG00000016445) #22	ENSMODG00000046811	BMP7 (ENSMODG00000016448) #23	SPO11 (ENSMODG00000023253) #24	RAE1 (ENSMODG00000016454) #25	RBM38 (ENSMODG00000016458) #26	CTCFL (ENSMODG00000016490) #27	PCK1 (ENSMODG00000016512) #28	ENSMODG00000016515	PMEPA1 (ENSMODG00000016521) #30	C20orf85 (ENSMODG00000038996) #31	ENSMODG00000023255 #32	ENSMODG00000016539 #33	RAB22A (ENSMODG00000016544) #34	ENSMODG00000016549 #35	ENSMODG00000023258
Platypus	MODERN SPECIES	19	ENSOANG00000043358 #9	ZNF217 (ENSOANG00000003139) #10	ENSOANG00000009238 #7	ENSOANG00000003140 #11	ENSOANG00000019907 #12	DOK5 (ENSOANG00000009239)	CBLN4 (ENSOANG00000045264) #13	MC3R (ENSOANG00000009244)	FAM210B (ENSOANG00000041846) #16	AURKA (ENSOANG00000011911) #17	CSTF1 (ENSOANG00000037738) #18	ENSOANG00000009246 #19	RTF2 (ENSOANG00000009249) #20	ENSOANG00000009251 #21	ENSOANG00000009252	TFAP2C (ENSOANG00000009253) #22	BMP7 (ENSOANG00000009254) #23	SPO11 (ENSOANG00000009256) #24	RAE1 (ENSOANG00000009257) #25	RBM38 (ENSOANG00000009259) #26	ENSOANG00000009260 #27	PCK1 (ENSOANG00000009261) #28	ENSOANG00000019904	PMEPA1 (ENSOANG00000009262) #30	ENSOANG00000009264 #31	ENSOANG00000009266 #33	RAB22A (ENSOANG00000009265) #34	VAPB (ENSOANG00000047042) #35	APCDD1L (ENSOANG00000047818) #36	STX16 (ENSOANG00000009269) #37	NPEPL1 (ENSOANG00000009270)