Mus	ANCESTRAL SPECIES	3	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094	ENSGT00390000002144
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094	ENSGT00390000002144
Ryukyu mouse	MODERN SPECIES	13	Kdf1 (MGP_CAROLIEiJ_G0026591) #7	Trnp1 (MGP_CAROLIEiJ_G0026590) #8	Tent5b (MGP_CAROLIEiJ_G0026589) #9	Slc9a1 (MGP_CAROLIEiJ_G0026588) #10	Wdtc1 (MGP_CAROLIEiJ_G0026587) #11	Tmem222 (MGP_CAROLIEiJ_G0026586) #12	Sytl1 (MGP_CAROLIEiJ_G0026585) #13	Map3k6 (MGP_CAROLIEiJ_G0026584) #14	Cd164l2 (MGP_CAROLIEiJ_G0026583) #15	Gpr3 (MGP_CAROLIEiJ_G0026582) #16	Wasf2 (MGP_CAROLIEiJ_G0026581) #17	Ahdc1 (MGP_CAROLIEiJ_G0026580) #18	Fgr (MGP_CAROLIEiJ_G0026579) #19	Fam76a (MGP_CAROLIEiJ_G0026578) #20	Stx12 (MGP_CAROLIEiJ_G0026577) #21	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #22	Themis2 (MGP_CAROLIEiJ_G0026575) #23	Rpa2 (MGP_CAROLIEiJ_G0026574) #24	Smpdl3b (MGP_CAROLIEiJ_G0026573) #25	Xkr8 (MGP_CAROLIEiJ_G0026572) #26	Eya3 (MGP_CAROLIEiJ_G0026571) #27	Ptafr (MGP_CAROLIEiJ_G0026570) #28	MGP_CAROLIEiJ_G0026569 #29	Atpif1 (MGP_CAROLIEiJ_G0026568) #30	Sesn2 (MGP_CAROLIEiJ_G0026567) #31	Med18 (MGP_CAROLIEiJ_G0026566) #32	Phactr4 (MGP_CAROLIEiJ_G0026565) #33	Rcc1 (MGP_CAROLIEiJ_G0026564) #34	Trnau1ap (MGP_CAROLIEiJ_G0026563) #35	Gmeb1 (MGP_CAROLIEiJ_G0026561) #36	Oprd1 (MGP_CAROLIEiJ_G0026559) #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094	ENSGT00390000002144
Mouse	MODERN SPECIES	13	Kdf1 (ENSMUSG00000037600) #7	Trnp1 (ENSMUSG00000056596) #8	Tent5b (ENSMUSG00000046694) #9	Slc9a1 (ENSMUSG00000028854) #10	Wdtc1 (ENSMUSG00000037622) #11	Tmem222 (ENSMUSG00000028857) #12	Sytl1 (ENSMUSG00000028860) #13	Map3k6 (ENSMUSG00000028862) #14	Cd164l2 (ENSMUSG00000028865) #15	Gpr3 (ENSMUSG00000049649) #16	Wasf2 (ENSMUSG00000028868) #17	Ahdc1 (ENSMUSG00000037692) #18	Fgr (ENSMUSG00000028874) #19	Fam76a (ENSMUSG00000028878) #20	Stx12 (ENSMUSG00000028879) #21	Ppp1r8 (ENSMUSG00000028882) #22	Themis2 (ENSMUSG00000037731) #23	Rpa2 (ENSMUSG00000028884) #24	Smpdl3b (ENSMUSG00000028885) #25	Xkr8 (ENSMUSG00000037752) #26	Eya3 (ENSMUSG00000028886) #27	Ptafr (ENSMUSG00000056529) #28	Dnajc8 (ENSMUSG00000054405) #29	Atpif1 (ENSMUSG00000054428) #30	Sesn2 (ENSMUSG00000028893) #31	Med18 (ENSMUSG00000066042) #32	Phactr4 (ENSMUSG00000066043) #33	Rcc1 (ENSMUSG00000028896) #34	Trnau1ap (ENSMUSG00000028898) #35	Rab42 (ENSMUSG00000089687)	Taf12 (ENSMUSG00000028899)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073.g #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094	ENSGT00390000002144
Steppe mouse	MODERN SPECIES	2142													Fgr (ENSMSIG00000013558) #19	ENSMSIG00000013640 #20	Stx12 (ENSMSIG00000013772) #21	Ppp1r8 (ENSMSIG00000013794) #22
spretus	MODERN SPECIES	13	Kdf1 (MGP_SPRETEiJ_G0027572) #7	Trnp1 (MGP_SPRETEiJ_G0027571) #8	Tent5b (MGP_SPRETEiJ_G0027570) #9	Slc9a1 (MGP_SPRETEiJ_G0027569) #10	Wdtc1 (MGP_SPRETEiJ_G0027568) #11	Tmem222 (MGP_SPRETEiJ_G0027567) #12	Sytl1 (MGP_SPRETEiJ_G0027566) #13	Map3k6 (MGP_SPRETEiJ_G0027565) #14	Cd164l2 (MGP_SPRETEiJ_G0027564) #15	Gpr3 (MGP_SPRETEiJ_G0027563) #16	Wasf2 (MGP_SPRETEiJ_G0027562) #17	Ahdc1 (MGP_SPRETEiJ_G0027561) #18	Fgr (MGP_SPRETEiJ_G0027560) #19	Fam76a (MGP_SPRETEiJ_G0027559) #20	Stx12 (MGP_SPRETEiJ_G0027558) #21	Ppp1r8 (MGP_SPRETEiJ_G0027557) #22	Themis2 (MGP_SPRETEiJ_G0027556) #23	Rpa2 (MGP_SPRETEiJ_G0027555) #24	Smpdl3b (MGP_SPRETEiJ_G0027554) #25	Xkr8 (MGP_SPRETEiJ_G0027553) #26	Eya3 (MGP_SPRETEiJ_G0027552) #27	Ptafr (MGP_SPRETEiJ_G0027551) #28	Dnajc8 (MGP_SPRETEiJ_G0027550) #29	Atpif1 (MGP_SPRETEiJ_G0027549) #30	Sesn2 (MGP_SPRETEiJ_G0027548) #31	Med18 (MGP_SPRETEiJ_G0027547) #32	Phactr4 (MGP_SPRETEiJ_G0027546) #33	Rcc1 (MGP_SPRETEiJ_G0027545) #34	Trnau1ap (MGP_SPRETEiJ_G0027544) #35	Rab42 (MGP_SPRETEiJ_G0027543)	Taf12 (MGP_SPRETEiJ_G0027542)
Shrew mouse	MODERN SPECIES	19	Kdf1 (MGP_PahariEiJ_G0028924) #7	Trnp1 (MGP_PahariEiJ_G0028923) #8	Tent5b (MGP_PahariEiJ_G0028922) #9	Slc9a1 (MGP_PahariEiJ_G0028921) #10	Wdtc1 (MGP_PahariEiJ_G0028920) #11	Tmem222 (MGP_PahariEiJ_G0028919) #12	Sytl1 (MGP_PahariEiJ_G0028918) #13	Map3k6 (MGP_PahariEiJ_G0028917) #14	Cd164l2 (MGP_PahariEiJ_G0028916) #15	Gpr3 (MGP_PahariEiJ_G0028915) #16	Wasf2 (MGP_PahariEiJ_G0028914) #17	Ahdc1 (MGP_PahariEiJ_G0028913) #18	Fgr (MGP_PahariEiJ_G0028912) #19	Fam76a (MGP_PahariEiJ_G0028911) #20	MGP_PahariEiJ_G0028910 #21	Ppp1r8 (MGP_PahariEiJ_G0028909) #22	Themis2 (MGP_PahariEiJ_G0028908) #23	Rpa2 (MGP_PahariEiJ_G0028907) #24	Smpdl3b (MGP_PahariEiJ_G0028906) #25	Xkr8 (MGP_PahariEiJ_G0028905) #26	Eya3 (MGP_PahariEiJ_G0028904) #27	Ptafr (MGP_PahariEiJ_G0028903) #28	MGP_PahariEiJ_G0028902 #29	Atpif1 (MGP_PahariEiJ_G0028901) #30	Sesn2 (MGP_PahariEiJ_G0028900) #31	Med18 (MGP_PahariEiJ_G0028899) #32	Phactr4 (MGP_PahariEiJ_G0028898) #33	Rcc1 (MGP_PahariEiJ_G0028897) #34	Trnau1ap (MGP_PahariEiJ_G0028896) #35	Rab42 (MGP_PahariEiJ_G0028895)	Taf12 (MGP_PahariEiJ_G0028894)