Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b	ENSGT00950000182978.B	ENSGT01060000248589.D	ENSGT00390000012569.a	ENSGT00390000006264	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000156139	ENSGT00940000162094	ENSGT00390000002144
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b	ENSGT00950000182978.B	ENSGT01060000248589.D	ENSGT00390000012569.a	ENSGT00390000006264	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000156139	ENSGT00940000162094	ENSGT00390000002144
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #19	ENSGT00940000160073.g #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b	ENSGT00950000182978.B	ENSGT01060000248589.D	ENSGT00390000012569.a	ENSGT00390000006264	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000156139	ENSGT00940000162094	ENSGT00390000002144
Steppe mouse	MODERN SPECIES	2142													Fgr (ENSMSIG00000013558) #19	ENSMSIG00000013640 #20	Stx12 (ENSMSIG00000013772) #21	Ppp1r8 (ENSMSIG00000013794) #22
spretus	MODERN SPECIES	13	Kdf1 (MGP_SPRETEiJ_G0027572)	Trnp1 (MGP_SPRETEiJ_G0027571)	Tent5b (MGP_SPRETEiJ_G0027570)	Slc9a1 (MGP_SPRETEiJ_G0027569)	Wdtc1 (MGP_SPRETEiJ_G0027568)	Tmem222 (MGP_SPRETEiJ_G0027567)	Sytl1 (MGP_SPRETEiJ_G0027566)	Map3k6 (MGP_SPRETEiJ_G0027565)	Cd164l2 (MGP_SPRETEiJ_G0027564)	Gpr3 (MGP_SPRETEiJ_G0027563)	Wasf2 (MGP_SPRETEiJ_G0027562)	Ahdc1 (MGP_SPRETEiJ_G0027561)	Fgr (MGP_SPRETEiJ_G0027560) #19	Fam76a (MGP_SPRETEiJ_G0027559) #20	Stx12 (MGP_SPRETEiJ_G0027558) #21	Ppp1r8 (MGP_SPRETEiJ_G0027557) #22	Themis2 (MGP_SPRETEiJ_G0027556)	Rpa2 (MGP_SPRETEiJ_G0027555)	Smpdl3b (MGP_SPRETEiJ_G0027554)	Xkr8 (MGP_SPRETEiJ_G0027553)	Eya3 (MGP_SPRETEiJ_G0027552)	Ptafr (MGP_SPRETEiJ_G0027551)	Dnajc8 (MGP_SPRETEiJ_G0027550)	Atpif1 (MGP_SPRETEiJ_G0027549)	Sesn2 (MGP_SPRETEiJ_G0027548)	Med18 (MGP_SPRETEiJ_G0027547)	Phactr4 (MGP_SPRETEiJ_G0027546)	Rcc1 (MGP_SPRETEiJ_G0027545)	Trnau1ap (MGP_SPRETEiJ_G0027544)	Rab42 (MGP_SPRETEiJ_G0027543)	Taf12 (MGP_SPRETEiJ_G0027542)
Mouse	MODERN SPECIES	13	Kdf1 (ENSMUSG00000037600)	Trnp1 (ENSMUSG00000056596)	Tent5b (ENSMUSG00000046694)	Slc9a1 (ENSMUSG00000028854)	Wdtc1 (ENSMUSG00000037622)	Tmem222 (ENSMUSG00000028857)	Sytl1 (ENSMUSG00000028860)	Map3k6 (ENSMUSG00000028862)	Cd164l2 (ENSMUSG00000028865)	Gpr3 (ENSMUSG00000049649)	Wasf2 (ENSMUSG00000028868)	Ahdc1 (ENSMUSG00000037692)	Fgr (ENSMUSG00000028874) #19	Fam76a (ENSMUSG00000028878) #20	Stx12 (ENSMUSG00000028879) #21	Ppp1r8 (ENSMUSG00000028882) #22	Themis2 (ENSMUSG00000037731)	Rpa2 (ENSMUSG00000028884)	Smpdl3b (ENSMUSG00000028885)	Xkr8 (ENSMUSG00000037752)	Eya3 (ENSMUSG00000028886)	Ptafr (ENSMUSG00000056529)	Dnajc8 (ENSMUSG00000054405)	Atpif1 (ENSMUSG00000054428)	Sesn2 (ENSMUSG00000028893)	Med18 (ENSMUSG00000066042)	Phactr4 (ENSMUSG00000066043)	Rcc1 (ENSMUSG00000028896)	Trnau1ap (ENSMUSG00000028898)	Rab42 (ENSMUSG00000089687)	Taf12 (ENSMUSG00000028899)
Ryukyu mouse	MODERN SPECIES	13	Kdf1 (MGP_CAROLIEiJ_G0026591)	Trnp1 (MGP_CAROLIEiJ_G0026590)	Tent5b (MGP_CAROLIEiJ_G0026589)	Slc9a1 (MGP_CAROLIEiJ_G0026588)	Wdtc1 (MGP_CAROLIEiJ_G0026587)	Tmem222 (MGP_CAROLIEiJ_G0026586)	Sytl1 (MGP_CAROLIEiJ_G0026585)	Map3k6 (MGP_CAROLIEiJ_G0026584)	Cd164l2 (MGP_CAROLIEiJ_G0026583)	Gpr3 (MGP_CAROLIEiJ_G0026582)	Wasf2 (MGP_CAROLIEiJ_G0026581)	Ahdc1 (MGP_CAROLIEiJ_G0026580)	Fgr (MGP_CAROLIEiJ_G0026579) #19	Fam76a (MGP_CAROLIEiJ_G0026578) #20	Stx12 (MGP_CAROLIEiJ_G0026577) #21	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #22	Themis2 (MGP_CAROLIEiJ_G0026575)	Rpa2 (MGP_CAROLIEiJ_G0026574)	Smpdl3b (MGP_CAROLIEiJ_G0026573)	Xkr8 (MGP_CAROLIEiJ_G0026572)	Eya3 (MGP_CAROLIEiJ_G0026571)	Ptafr (MGP_CAROLIEiJ_G0026570)	MGP_CAROLIEiJ_G0026569	Atpif1 (MGP_CAROLIEiJ_G0026568)	Sesn2 (MGP_CAROLIEiJ_G0026567)	Med18 (MGP_CAROLIEiJ_G0026566)	Phactr4 (MGP_CAROLIEiJ_G0026565)	Rcc1 (MGP_CAROLIEiJ_G0026564)	Trnau1ap (MGP_CAROLIEiJ_G0026563)	Gmeb1 (MGP_CAROLIEiJ_G0026561)	Oprd1 (MGP_CAROLIEiJ_G0026559)