Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Glires	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Muroidea	ANCESTRAL SPECIES	3	ENSGT00900000143263	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00900000143263	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Mouse	MODERN SPECIES	13	Kdf1 (ENSMUSG00000037600) #7	Trnp1 (ENSMUSG00000056596) #8	Tent5b (ENSMUSG00000046694) #9	Slc9a1 (ENSMUSG00000028854) #10	Wdtc1 (ENSMUSG00000037622) #11	Tmem222 (ENSMUSG00000028857) #12	Sytl1 (ENSMUSG00000028860) #13	Map3k6 (ENSMUSG00000028862) #14	Cd164l2 (ENSMUSG00000028865) #15	Gpr3 (ENSMUSG00000049649) #16	Wasf2 (ENSMUSG00000028868) #17	Ahdc1 (ENSMUSG00000037692) #18	Fgr (ENSMUSG00000028874) #19	Fam76a (ENSMUSG00000028878) #20	Stx12 (ENSMUSG00000028879) #21	Ppp1r8 (ENSMUSG00000028882) #22	Themis2 (ENSMUSG00000037731) #23	Rpa2 (ENSMUSG00000028884) #24	Smpdl3b (ENSMUSG00000028885) #25	Xkr8 (ENSMUSG00000037752) #26	Eya3 (ENSMUSG00000028886) #27	Ptafr (ENSMUSG00000056529) #28	Dnajc8 (ENSMUSG00000054405) #29	Atpif1 (ENSMUSG00000054428) #30	Sesn2 (ENSMUSG00000028893) #31	Med18 (ENSMUSG00000066042) #32	Phactr4 (ENSMUSG00000066043) #33	Rcc1 (ENSMUSG00000028896) #34	Trnau1ap (ENSMUSG00000028898) #35	Rab42 (ENSMUSG00000089687) #36	Taf12 (ENSMUSG00000028899) #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073.g #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Steppe mouse	MODERN SPECIES	2142													Fgr (ENSMSIG00000013558) #19	ENSMSIG00000013640 #20	Stx12 (ENSMSIG00000013772) #21	Ppp1r8 (ENSMSIG00000013794) #22
spretus	MODERN SPECIES	13	Kdf1 (MGP_SPRETEiJ_G0027572) #7	Trnp1 (MGP_SPRETEiJ_G0027571) #8	Tent5b (MGP_SPRETEiJ_G0027570) #9	Slc9a1 (MGP_SPRETEiJ_G0027569) #10	Wdtc1 (MGP_SPRETEiJ_G0027568) #11	Tmem222 (MGP_SPRETEiJ_G0027567) #12	Sytl1 (MGP_SPRETEiJ_G0027566) #13	Map3k6 (MGP_SPRETEiJ_G0027565) #14	Cd164l2 (MGP_SPRETEiJ_G0027564) #15	Gpr3 (MGP_SPRETEiJ_G0027563) #16	Wasf2 (MGP_SPRETEiJ_G0027562) #17	Ahdc1 (MGP_SPRETEiJ_G0027561) #18	Fgr (MGP_SPRETEiJ_G0027560) #19	Fam76a (MGP_SPRETEiJ_G0027559) #20	Stx12 (MGP_SPRETEiJ_G0027558) #21	Ppp1r8 (MGP_SPRETEiJ_G0027557) #22	Themis2 (MGP_SPRETEiJ_G0027556) #23	Rpa2 (MGP_SPRETEiJ_G0027555) #24	Smpdl3b (MGP_SPRETEiJ_G0027554) #25	Xkr8 (MGP_SPRETEiJ_G0027553) #26	Eya3 (MGP_SPRETEiJ_G0027552) #27	Ptafr (MGP_SPRETEiJ_G0027551) #28	Dnajc8 (MGP_SPRETEiJ_G0027550) #29	Atpif1 (MGP_SPRETEiJ_G0027549) #30	Sesn2 (MGP_SPRETEiJ_G0027548) #31	Med18 (MGP_SPRETEiJ_G0027547) #32	Phactr4 (MGP_SPRETEiJ_G0027546) #33	Rcc1 (MGP_SPRETEiJ_G0027545) #34	Trnau1ap (MGP_SPRETEiJ_G0027544) #35	Rab42 (MGP_SPRETEiJ_G0027543) #36	Taf12 (MGP_SPRETEiJ_G0027542) #37
Ryukyu mouse	MODERN SPECIES	13	Kdf1 (MGP_CAROLIEiJ_G0026591) #7	Trnp1 (MGP_CAROLIEiJ_G0026590) #8	Tent5b (MGP_CAROLIEiJ_G0026589) #9	Slc9a1 (MGP_CAROLIEiJ_G0026588) #10	Wdtc1 (MGP_CAROLIEiJ_G0026587) #11	Tmem222 (MGP_CAROLIEiJ_G0026586) #12	Sytl1 (MGP_CAROLIEiJ_G0026585) #13	Map3k6 (MGP_CAROLIEiJ_G0026584) #14	Cd164l2 (MGP_CAROLIEiJ_G0026583) #15	Gpr3 (MGP_CAROLIEiJ_G0026582) #16	Wasf2 (MGP_CAROLIEiJ_G0026581) #17	Ahdc1 (MGP_CAROLIEiJ_G0026580) #18	Fgr (MGP_CAROLIEiJ_G0026579) #19	Fam76a (MGP_CAROLIEiJ_G0026578) #20	Stx12 (MGP_CAROLIEiJ_G0026577) #21	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #22	Themis2 (MGP_CAROLIEiJ_G0026575) #23	Rpa2 (MGP_CAROLIEiJ_G0026574) #24	Smpdl3b (MGP_CAROLIEiJ_G0026573) #25	Xkr8 (MGP_CAROLIEiJ_G0026572) #26	Eya3 (MGP_CAROLIEiJ_G0026571) #27	Ptafr (MGP_CAROLIEiJ_G0026570) #28	MGP_CAROLIEiJ_G0026569 #29	Atpif1 (MGP_CAROLIEiJ_G0026568) #30	Sesn2 (MGP_CAROLIEiJ_G0026567) #31	Med18 (MGP_CAROLIEiJ_G0026566) #32	Phactr4 (MGP_CAROLIEiJ_G0026565) #33	Rcc1 (MGP_CAROLIEiJ_G0026564) #34	Trnau1ap (MGP_CAROLIEiJ_G0026563) #35	Gmeb1 (MGP_CAROLIEiJ_G0026561)	Oprd1 (MGP_CAROLIEiJ_G0026559)
Shrew mouse	MODERN SPECIES	19	Kdf1 (MGP_PahariEiJ_G0028924) #7	Trnp1 (MGP_PahariEiJ_G0028923) #8	Tent5b (MGP_PahariEiJ_G0028922) #9	Slc9a1 (MGP_PahariEiJ_G0028921) #10	Wdtc1 (MGP_PahariEiJ_G0028920) #11	Tmem222 (MGP_PahariEiJ_G0028919) #12	Sytl1 (MGP_PahariEiJ_G0028918) #13	Map3k6 (MGP_PahariEiJ_G0028917) #14	Cd164l2 (MGP_PahariEiJ_G0028916) #15	Gpr3 (MGP_PahariEiJ_G0028915) #16	Wasf2 (MGP_PahariEiJ_G0028914) #17	Ahdc1 (MGP_PahariEiJ_G0028913) #18	Fgr (MGP_PahariEiJ_G0028912) #19	Fam76a (MGP_PahariEiJ_G0028911) #20	MGP_PahariEiJ_G0028910 #21	Ppp1r8 (MGP_PahariEiJ_G0028909) #22	Themis2 (MGP_PahariEiJ_G0028908) #23	Rpa2 (MGP_PahariEiJ_G0028907) #24	Smpdl3b (MGP_PahariEiJ_G0028906) #25	Xkr8 (MGP_PahariEiJ_G0028905) #26	Eya3 (MGP_PahariEiJ_G0028904) #27	Ptafr (MGP_PahariEiJ_G0028903) #28	MGP_PahariEiJ_G0028902 #29	Atpif1 (MGP_PahariEiJ_G0028901) #30	Sesn2 (MGP_PahariEiJ_G0028900) #31	Med18 (MGP_PahariEiJ_G0028899) #32	Phactr4 (MGP_PahariEiJ_G0028898) #33	Rcc1 (MGP_PahariEiJ_G0028897) #34	Trnau1ap (MGP_PahariEiJ_G0028896) #35	Rab42 (MGP_PahariEiJ_G0028895) #36	Taf12 (MGP_PahariEiJ_G0028894) #37
Rat	MODERN SPECIES	15	ENSRNOG00000068236	Trnp1 (ENSRNOG00000055936) #8	Tent5b (ENSRNOG00000056153) #9	Slc9a1 (ENSRNOG00000007982) #10	Wdtc1 (ENSRNOG00000008377) #11	Tmem222 (ENSRNOG00000008564) #12	Map3k6 (ENSRNOG00000008936) #14	Cd164l2 (ENSRNOG00000009505) #15	Sytl1 (ENSRNOG00000008600) #13	Gpr3 (ENSRNOG00000009540) #16	Wasf2 (ENSRNOG00000009805) #17	Ahdc1 (ENSRNOG00000042855) #18	Fgr (ENSRNOG00000009912) #19	Fam76a (ENSRNOG00000011254) #20	Stx12 (ENSRNOG00000011804) #21	Ppp1r8 (ENSRNOG00000059550) #22	Themis2 (ENSRNOG00000012965) #23	Rpa2 (ENSRNOG00000013005) #24	Smpdl3b (ENSRNOG00000042326) #25	Xkr8 (ENSRNOG00000024312) #26	Eya3 (ENSRNOG00000010396) #27	Ptafr (ENSRNOG00000013231) #28	Dnajc8 (ENSRNOG00000013255) #29	Atp5if1 (ENSRNOG00000013300) #30	Sesn2 (ENSRNOG00000042785) #31	Med18 (ENSRNOG00000067073) #32	LOC120102993 (ENSRNOG00000031506)	Phactr4 (ENSRNOG00000046922) #33	Rcc1 (ENSRNOG00000050106) #34	Trnau1ap (ENSRNOG00000055344) #35	Rab42 (ENSRNOG00000063150) #36
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00900000143263	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00940000164617	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37	ENSGT00410000025596.a.b
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	1	Kdf1 (ENSMOCG00000008803) #7	Trnp1 (ENSMOCG00000004450) #8	Tent5b (ENSMOCG00000006029) #9	Slc9a1 (ENSMOCG00000001951) #10	Wdtc1 (ENSMOCG00000021708) #11	Tmem222 (ENSMOCG00000001826) #12	Sytl1 (ENSMOCG00000006535) #13	Map3k6 (ENSMOCG00000022830) #14	Cd164l2 (ENSMOCG00000012161) #15	Gpr3 (ENSMOCG00000014276) #16	Wasf2 (ENSMOCG00000015492) #17	Ahdc1 (ENSMOCG00000016500) #18	Fgr (ENSMOCG00000019562) #19	Fam76a (ENSMOCG00000021395) #20	Stx12 (ENSMOCG00000014196) #21	ENSMOCG00000022691 #22	Themis2 (ENSMOCG00000003168) #23	Rpa2 (ENSMOCG00000007092) #24	Smpdl3b (ENSMOCG00000016324) #25	Xkr8 (ENSMOCG00000002218) #26	Eya3 (ENSMOCG00000004582) #27	Ptafr (ENSMOCG00000013409) #28	Dnajc8 (ENSMOCG00000017213) #29	Atpif1 (ENSMOCG00000002419) #30	Sesn2 (ENSMOCG00000012718) #31	Med18 (ENSMOCG00000022182) #32	Phactr4 (ENSMOCG00000012753) #33	Rcc1 (ENSMOCG00000016589) #34	Trnau1ap (ENSMOCG00000011189) #35	Rab42 (ENSMOCG00000021639) #36	Taf12 (ENSMOCG00000006333) #37
Prairie vole	MODERN SPECIES	360	Prdx4 (ENSMOCG00000014602)	Ptchd1 (ENSMOCG00000020483)	ENSMOCG00000017700	ENSMOCG00000012478 ##29	ENSMOCG00000006009	Phex (ENSMOCG00000021326)	Sms (ENSMOCG00000016092)	Yy2 (ENSMOCG00000013780)	Mbtps2 (ENSMOCG00000016533)	Smpx (ENSMOCG00000009712)	Cnksr2 (ENSMOCG00000000158)	ENSMOCG00000017907	ENSMOCG00000016797	Rps6ka3 (ENSMOCG00000012164)	ENSMOCG00000013551	ENSMOCG00000004138 #22	Map7d2 (ENSMOCG00000019149)	Bclaf3 (ENSMOCG00000005833)	Sh3kbp1 (ENSMOCG00000020425)	Map3k15 (ENSMOCG00000013071)	Pdha1 (ENSMOCG00000002601)	Adgrg2 (ENSMOCG00000011315)	Phka2 (ENSMOCG00000021208)	Ppef1 (ENSMOCG00000019014)	Rs1 (ENSMOCG00000012992)	Cdkl5 (ENSMOCG00000014110)	Scml2 (ENSMOCG00000004081)	Bend2 (ENSMOCG00000002447)	Rai2 (ENSMOCG00000020088)	Nhs (ENSMOCG00000016164)	ENSMOCG00000006840
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000024927	Tent5b (ENSPEMG00000026289) #9	Slc9a1 (ENSPEMG00000008998) #10	Wdtc1 (ENSPEMG00000011264) #11	Tmem222 (ENSPEMG00000017489) #12	Sytl1 (ENSPEMG00000011614) #13	Map3k6 (ENSPEMG00000015180) #14	Cd164l2 (ENSPEMG00000013041) #15	Gpr3 (ENSPEMG00000005212) #16	Wasf2 (ENSPEMG00000011815) #17	ENSPEMG00000013859	Ahdc1 (ENSPEMG00000014274) #18	Fgr (ENSPEMG00000000914) #19	ENSPEMG00000014678 #20	Stx12 (ENSPEMG00000025346) #21	Ppp1r8 (ENSPEMG00000003512) #22	Themis2 (ENSPEMG00000008336) #23	Rpa2 (ENSPEMG00000006270) #24	Smpdl3b (ENSPEMG00000003316) #25	Xkr8 (ENSPEMG00000025921) #26	Eya3 (ENSPEMG00000000391) #27	Ptafr (ENSPEMG00000025544) #28	Dnajc8 (ENSPEMG00000013544) #29	Atpif1 (ENSPEMG00000025196) #30	Sesn2 (ENSPEMG00000001779) #31	Med18 (ENSPEMG00000015562) #32	ENSPEMG00000004708	Phactr4 (ENSPEMG00000000179) #33	Rcc1 (ENSPEMG00000016697) #34	Trnau1ap (ENSPEMG00000007877) #35	Rab42 (ENSPEMG00000027698) #36
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00900000143263	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Golden Hamster	MODERN SPECIES	709	Kdf1 (ENSMAUG00000021929) #7	Trnp1 (ENSMAUG00000019939) #8	Tent5b (ENSMAUG00000014675) #9	ENSMAUG00000001078 #10	Wdtc1 (ENSMAUG00000004693) #11	Tmem222 (ENSMAUG00000007829) #12	Sytl1 (ENSMAUG00000018014) #13	Map3k6 (ENSMAUG00000017302) #14	ENSMAUG00000011191	Gpr3 (ENSMAUG00000014246) #16	Wasf2 (ENSMAUG00000012124) #17	Ahdc1 (ENSMAUG00000013108) #18	Fgr (ENSMAUG00000006765) #19	Fam76a (ENSMAUG00000016561) #20	Stx12 (ENSMAUG00000016314) #21	Ppp1r8 (ENSMAUG00000009797) #22	Themis2 (ENSMAUG00000000821) #23	Rpa2 (ENSMAUG00000002825) #24	Smpdl3b (ENSMAUG00000014184) #25	Xkr8 (ENSMAUG00000009395) #26	Eya3 (ENSMAUG00000015674) #27	Ptafr (ENSMAUG00000008850) #28	ENSMAUG00000018320	Sesn2 (ENSMAUG00000000726) #31	Med18 (ENSMAUG00000019176) #32	Phactr4 (ENSMAUG00000018484) #33	Rcc1 (ENSMAUG00000020618) #34	ENSMAUG00000020183	Rab42 (ENSMAUG00000020223) #36	Taf12 (ENSMAUG00000019991) #37	Gmeb1 (ENSMAUG00000008912)
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001022474	Trnp1 (ENSCGRG00001024587) #8	Tent5b (ENSCGRG00001024770) #9	Slc9a1 (ENSCGRG00001002747) #10	Wdtc1 (ENSCGRG00001015126) #11	Tmem222 (ENSCGRG00001020116) #12	Sytl1 (ENSCGRG00001013995) #13	Map3k6 (ENSCGRG00001019547) #14	Cd164l2 (ENSCGRG00001024895) #15	Gpr3 (ENSCGRG00001001244) #16	Wasf2 (ENSCGRG00001020852) #17	Ahdc1 (ENSCGRG00001012820) #18	Fgr (ENSCGRG00001024485) #19	ENSCGRG00001007863 #20	Stx12 (ENSCGRG00001016934) #21	Ppp1r8 (ENSCGRG00001019839) #22	Themis2 (ENSCGRG00001024729) #23	Rpa2 (ENSCGRG00001007332) #24	Smpdl3b (ENSCGRG00001016883) #25	Xkr8 (ENSCGRG00001017118) #26	Eya3 (ENSCGRG00001018576) #27	Ptafr (ENSCGRG00001012404) #28	ENSCGRG00001000534 #29	Atpif1 (ENSCGRG00001023397) #30	Sesn2 (ENSCGRG00001020650) #31	MED18 (ENSCGRG00001022480) #32	Phactr4 (ENSCGRG00001021956) #33	ENSCGRG00001023596 #34	Trnau1ap (ENSCGRG00001004713) #35	Rab42 (ENSCGRG00001019426) #36	Taf12 (ENSCGRG00001024959) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	967	Tent5b (ENSNGAG00000010187) #9	ENSNGAG00000020552	Slc9a1 (ENSNGAG00000016127) #10	Wdtc1 (ENSNGAG00000013121) #11	Tmem222 (ENSNGAG00000011488) #12	Sytl1 (ENSNGAG00000014815) #13	Map3k6 (ENSNGAG00000017010) #14	Cd164l2 (ENSNGAG00000019740) #15	Gpr3 (ENSNGAG00000017974) #16	Wasf2 (ENSNGAG00000017438) #17	Ahdc1 (ENSNGAG00000013639) #18	Fgr (ENSNGAG00000014779) #19	ENSNGAG00000012320	Fam76a (ENSNGAG00000021702) #20	Stx12 (ENSNGAG00000022319) #21	Ppp1r8 (ENSNGAG00000001089) #22
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	201	Kdf1 (ENSJJAG00000017615) #7	ENSJJAG00000017789 #9	Slc9a1 (ENSJJAG00000019281) #10	Wdtc1 (ENSJJAG00000021957) #11	Tmem222 (ENSJJAG00000002275) #12	Sytl1 (ENSJJAG00000011352) #13	Map3k6 (ENSJJAG00000020163) #14	ENSJJAG00000014104	Cd164l2 (ENSJJAG00000014470) #15	Gpr3 (ENSJJAG00000018961) #16	Wasf2 (ENSJJAG00000019149) #17	Ahdc1 (ENSJJAG00000019425) #18	Fgr (ENSJJAG00000019812) #19	ENSJJAG00000002452 #20	Stx12 (ENSJJAG00000004079) #21	ENSJJAG00000010784 #22	Themis2 (ENSJJAG00000012926) #23	ENSJJAG00000014579 #24	Smpdl3b (ENSJJAG00000015036) #25	Xkr8 (ENSJJAG00000015552) #26	Eya3 (ENSJJAG00000017580) #27	Ptafr (ENSJJAG00000012719) #28	ENSJJAG00000009301	Atpif1 (ENSJJAG00000010517) #30	Sesn2 (ENSJJAG00000011184) #31	Phactr4 (ENSJJAG00000015640) #33	ENSJJAG00000022388	ENSJJAG00000012669	Rcc1 (ENSJJAG00000002119) #34	Trnau1ap (ENSJJAG00000010128) #35	Rab42 (ENSJJAG00000021507) #36
Lesser Egyptian jerboa	MODERN SPECIES	55	Malt1 (ENSJJAG00000016390)	Alpk2 (ENSJJAG00000013993)	Nedd4l (ENSJJAG00000020973)	Atp8b1 (ENSJJAG00000012498)	Nars (ENSJJAG00000017350)	Fech (ENSJJAG00000011444)	Onecut2 (ENSJJAG00000017927)	St8sia3 (ENSJJAG00000016099)	ENSJJAG00000013165	ENSJJAG00000014521	Txnl1 (ENSJJAG00000016664)	Tcf4 (ENSJJAG00000018021)	ENSJJAG00000011980	Ccdc68 (ENSJJAG00000020246)	Rab27b (ENSJJAG00000019754)	ENSJJAG00000020176 #22	Dynap (ENSJJAG00000011504)	4930503L19Rik (ENSJJAG00000010721)	Stard6 (ENSJJAG00000023620)	Mbd2 (ENSJJAG00000024363)
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	325	ENSDORG00000030030	Tent5b (ENSDORG00000015648) #9	Slc9a1 (ENSDORG00000012211) #10	Wdtc1 (ENSDORG00000012982) #11	Tmem222 (ENSDORG00000009464) #12	Sytl1 (ENSDORG00000009466) #13	Map3k6 (ENSDORG00000009469) #14	ENSDORG00000009474	Cd164l2 (ENSDORG00000009477) #15	Gpr3 (ENSDORG00000007347) #16	Wasf2 (ENSDORG00000007346) #17	Ahdc1 (ENSDORG00000010729) #18	Fgr (ENSDORG00000015238) #19	Fam76a (ENSDORG00000000575) #20	Stx12 (ENSDORG00000001059) #21	ENSDORG00000025172 #22	Themis2 (ENSDORG00000003740) #23	Rpa2 (ENSDORG00000003741) #24	Smpdl3b (ENSDORG00000015612) #25	Xkr8 (ENSDORG00000023428) #26	Eya3 (ENSDORG00000015614) #27	Ptafr (ENSDORG00000027100) #28	Dnajc8 (ENSDORG00000004488) #29	Atpif1 (ENSDORG00000004489) #30	Sesn2 (ENSDORG00000004491) #31	Med18 (ENSDORG00000003626) #32	Phactr4 (ENSDORG00000003281) #33	Rcc1 (ENSDORG00000008750) #34	Rab42 (ENSDORG00000023607) #36	Trnau1ap (ENSDORG00000006349) #35	Taf12 (ENSDORG00000015036) #37
Kangaroo rat	MODERN SPECIES	493										ENSDORG00000005862	Fxr1 (ENSDORG00000005853)	Ccdc39 (ENSDORG00000002728)	Ttc14 (ENSDORG00000002727)	Pex5l (ENSDORG00000013007)	Usp13 (ENSDORG00000013004)	ENSDORG00000001060 #22	Ndufb5 (ENSDORG00000007651)	Mrpl47 (ENSDORG00000007650)	Actl6a (ENSDORG00000007648)	Gnb4 (ENSDORG00000015363)	Mfn1 (ENSDORG00000016388)	Zfp639 (ENSDORG00000004733)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000016565 #7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00940000163188	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Long-tailed chinchilla	MODERN SPECIES	159	NUDC (ENSCLAG00000008191)	KDF1 (ENSCLAG00000009636) #7	TENT5B (ENSCLAG00000010180) #9	SLC9A1 (ENSCLAG00000011250) #10	WDTC1 (ENSCLAG00000012710) #11	TMEM222 (ENSCLAG00000014379) #12	SYTL1 (ENSCLAG00000011750) #13	MAP3K6 (ENSCLAG00000015178) #14	FCN3 (ENSCLAG00000010084)	GPR3 (ENSCLAG00000012893) #16	WASF2 (ENSCLAG00000013958) #17	AHDC1 (ENSCLAG00000013754) #18	FGR (ENSCLAG00000014147) #19	FAM76A (ENSCLAG00000008844) #20	STX12 (ENSCLAG00000013795) #21	PPP1R8 (ENSCLAG00000011211) #22	THEMIS2 (ENSCLAG00000012140) #23	RPA2 (ENSCLAG00000010772) #24	SMPDL3B (ENSCLAG00000011768) #25	XKR8 (ENSCLAG00000011287) #26	EYA3 (ENSCLAG00000008901) #27	PTAFR (ENSCLAG00000017842) #28	DNAJC8 (ENSCLAG00000007390) #29	ATP5IF1 (ENSCLAG00000014624) #30	SESN2 (ENSCLAG00000011979) #31	MED18 (ENSCLAG00000015343) #32	PHACTR4 (ENSCLAG00000016145) #33	RCC1 (ENSCLAG00000008107) #34	TRNAU1AP (ENSCLAG00000008223) #35	RAB42 (ENSCLAG00000010175) #36	TAF12 (ENSCLAG00000007187) #37
Degu	MODERN SPECIES	204	SLC9A1 (ENSODEG00000003659) #10	ENSODEG00000003743	WDTC1 (ENSODEG00000003804) #11	TMEM222 (ENSODEG00000003675) #12	SYTL1 (ENSODEG00000003707) #13	MAP3K6 (ENSODEG00000004172) #14	CD164L2 (ENSODEG00000004416) #15	GPR3 (ENSODEG00000004543) #16	WASF2 (ENSODEG00000003793) #17	AHDC1 (ENSODEG00000019150) #18	FGR (ENSODEG00000004016) #19	ENSODEG00000019010	FAM76A (ENSODEG00000004142) #20	ENSODEG00000019037	STX12 (ENSODEG00000004182) #21	PPP1R8 (ENSODEG00000004352) #22	ENSODEG00000004373	THEMIS2 (ENSODEG00000004403) #23	ENSODEG00000004443 #24	ENSODEG00000003467 #25	XKR8 (ENSODEG00000003481) #26	EYA3 (ENSODEG00000003507) #27	PTAFR (ENSODEG00000018990) #28	ENSODEG00000003721 #29	ATP5IF1 (ENSODEG00000003747) #30	SESN2 (ENSODEG00000003769) #31	MED18 (ENSODEG00000003791) #32	ENSODEG00000003828	ENSODEG00000018954	PHACTR4 (ENSODEG00000003857) #33	RCC1 (ENSODEG00000003970) #34
Guinea pig	MODERN SPECIES	25	KDF1 (ENSCPOG00000022999) #7	TENT5B (ENSCPOG00000032542) #9	SLC9A1 (ENSCPOG00000035897) #10	WDTC1 (ENSCPOG00000012347) #11	TMEM222 (ENSCPOG00000020198) #12	SYTL1 (ENSCPOG00000012354) #13	MAP3K6 (ENSCPOG00000012359) #14	CD164L2 (ENSCPOG00000022092) #15	GPR3 (ENSCPOG00000027123) #16	WASF2 (ENSCPOG00000012376) #17	AHDC1 (ENSCPOG00000022607) #18	FGR (ENSCPOG00000015092) #19	ENSCPOG00000031828	FAM76A (ENSCPOG00000006186) #20	STX12 (ENSCPOG00000013160) #21	PPP1R8 (ENSCPOG00000036078) #22	THEMIS2 (ENSCPOG00000033796) #23	RPA2 (ENSCPOG00000008766) #24	SMPDL3B (ENSCPOG00000008773) #25	ENSCPOG00000033302	EYA3 (ENSCPOG00000012512) #27	PTAFR (ENSCPOG00000031748) #28	DNAJC8 (ENSCPOG00000014652) #29	ATP5IF1 (ENSCPOG00000030836) #30	SESN2 (ENSCPOG00000000236) #31	MED18 (ENSCPOG00000038084) #32	PHACTR4 (ENSCPOG00000003219) #33	RCC1 (ENSCPOG00000010069) #34	TRNAU1AP (ENSCPOG00000001925) #35	RAB42 (ENSCPOG00000037627) #36	TAF12 (ENSCPOG00000009044) #37
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000047714	SLC9A1 (ENSHGLG00000036829) #10	ENSHGLG00000044722	WDTC1 (ENSHGLG00000013846) #11	ENSHGLG00000007610	TMEM222 (ENSHGLG00000011121) #12	SYTL1 (ENSHGLG00000011880) #13	MAP3K6 (ENSHGLG00000012888) #14	FCN3 (ENSHGLG00000012337)	ENSHGLG00000013863 #15	GPR3 (ENSHGLG00000046961) #16	WASF2 (ENSHGLG00000048286) #17	AHDC1 (ENSHGLG00000014470) #18	FGR (ENSHGLG00000018738) #19	FAM76A (ENSHGLG00000009747) #20	ENSHGLG00000014326 #22	THEMIS2 (ENSHGLG00000019146) #23	RPA2 (ENSHGLG00000018528) #24	SMPDL3B (ENSHGLG00000012112) #25	XKR8 (ENSHGLG00000012712) #26	ENSHGLG00000046470	EYA3 (ENSHGLG00000018515) #27	ENSHGLG00000032519	PTAFR (ENSHGLG00000048424) #28	DNAJC8 (ENSHGLG00000011449) #29	ENSHGLG00000050011 #30	SESN2 (ENSHGLG00000011617) #31	MED18 (ENSHGLG00000049561) #32	PHACTR4 (ENSHGLG00000012380) #33	RCC1 (ENSHGLG00000010563) #34	ENSHGLG00000010380 #35
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00900000143263	ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00960000190607	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000017418 #8	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT01000000214440.A.a.b.a #21	ENSGT00960000190607	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00390000012569.a #29	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00390000003312 #32	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37
Squirrel	MODERN SPECIES	74	TENT5B (ENSSTOG00000022787) #9	ENSSTOG00000021677	ENSSTOG00000025429	SLC9A1 (ENSSTOG00000009815) #10	WDTC1 (ENSSTOG00000014225) #11	TMEM222 (ENSSTOG00000014234) #12	SYTL1 (ENSSTOG00000014242) #13	MAP3K6 (ENSSTOG00000014251) #14	CD164L2 (ENSSTOG00000024078) #15	GPR3 (ENSSTOG00000024790) #16	WASF2 (ENSSTOG00000003138) #17	AHDC1 (ENSSTOG00000025025) #18	FGR (ENSSTOG00000026717) #19	FAM76A (ENSSTOG00000004331) #20	STX12 (ENSSTOG00000019943) #21	PPP1R8 (ENSSTOG00000004381) #22	THEMIS2 (ENSSTOG00000034218) #23	RPA2 (ENSSTOG00000004433) #24	SMPDL3B (ENSSTOG00000004468) #25	XKR8 (ENSSTOG00000023254) #26	EYA3 (ENSSTOG00000004478) #27	PTAFR (ENSSTOG00000015934) #28	DNAJC8 (ENSSTOG00000012834) #29	ATP5IF1 (ENSSTOG00000020766) #30	SESN2 (ENSSTOG00000009293) #31	MED18 (ENSSTOG00000020723) #32	PHACTR4 (ENSSTOG00000006463) #33	RCC1 (ENSSTOG00000012131) #34	TRNAU1AP (ENSSTOG00000000079) #35	RAB42 (ENSSTOG00000000084) #36	TAF12 (ENSSTOG00000000086) #37
Arctic ground squirrel	MODERN SPECIES	92	TENT5B (ENSUPAG00010021251) #9	ENSUPAG00010021249	SLC9A1 (ENSUPAG00010021229) #10	WDTC1 (ENSUPAG00010021189) #11	TMEM222 (ENSUPAG00010021173) #12	SYTL1 (ENSUPAG00010021146) #13	MAP3K6 (ENSUPAG00010021121) #14	CD164L2 (ENSUPAG00010021117) #15	GPR3 (ENSUPAG00010021112) #16	WASF2 (ENSUPAG00010021099) #17	AHDC1 (ENSUPAG00010021095) #18	FGR (ENSUPAG00010021065) #19	FAM76A (ENSUPAG00010021053) #20	STX12 (ENSUPAG00010021044) #21	ENSUPAG00010021039	PPP1R8 (ENSUPAG00010021025) #22	THEMIS2 (ENSUPAG00010021016) #23	SMPDL3B (ENSUPAG00010021005) #25	XKR8 (ENSUPAG00010020998) #26	EYA3 (ENSUPAG00010020872) #27	PTAFR (ENSUPAG00010020865) #28	ENSUPAG00010020856	ATP5IF1 (ENSUPAG00010020850) #30	SESN2 (ENSUPAG00010020839) #31	ENSUPAG00010020838	MED18 (ENSUPAG00010020827) #32	PHACTR4 (ENSUPAG00010020803) #33	RCC1 (ENSUPAG00010020770) #34	TRNAU1AP (ENSUPAG00010020750) #35	RAB42 (ENSUPAG00010020728) #36	ENSUPAG00010020706 #37
Alpin marmot	MODERN SPECIES	15	ENSMMMG00000013673	TRNP1 (ENSMMMG00000013667) #8	TENT5B (ENSMMMG00000013661) #9	SLC9A1 (ENSMMMG00000013639) #10	WDTC1 (ENSMMMG00000013616) #11	TMEM222 (ENSMMMG00000013607) #12	SYTL1 (ENSMMMG00000013574) #13	MAP3K6 (ENSMMMG00000013538) #14	CD164L2 (ENSMMMG00000013519) #15	GPR3 (ENSMMMG00000013517) #16	WASF2 (ENSMMMG00000013504) #17	FGR (ENSMMMG00000013453) #19	FAM76A (ENSMMMG00000013430) #20	STX12 (ENSMMMG00000013420) #21	ENSMMMG00000013416	PPP1R8 (ENSMMMG00000013396) #22	THEMIS2 (ENSMMMG00000013395) #23	RPA2 (ENSMMMG00000013382) #24	SMPDL3B (ENSMMMG00000013366) #25	XKR8 (ENSMMMG00000013348) #26	EYA3 (ENSMMMG00000013195) #27	PTAFR (ENSMMMG00000013184) #28	DNAJC8 (ENSMMMG00000013133) #29	ATP5IF1 (ENSMMMG00000013117) #30	SESN2 (ENSMMMG00000013099) #31	MED18 (ENSMMMG00000013084) #32	PHACTR4 (ENSMMMG00000013031) #33	RCC1 (ENSMMMG00000012973) #34	TRNAU1AP (ENSMMMG00000012958) #35	RAB42 (ENSMMMG00000012933) #36	TAF12 (ENSMMMG00000012915) #37
Eurasian red squirrel	MODERN SPECIES		TRNP1 (ENSSVLG00005002944) #8	TENT5B (ENSSVLG00005002952) #9	ENSSVLG00005002968	SLC9A1 (ENSSVLG00005002990) #10	WDTC1 (ENSSVLG00005003051) #11	TMEM222 (ENSSVLG00005003203) #12	SYTL1 (ENSSVLG00005003264) #13	MAP3K6 (ENSSVLG00005003393) #14	CD164L2 (ENSSVLG00005003518) #15	GPR3 (ENSSVLG00005003531) #16	WASF2 (ENSSVLG00005003551) #17	FGR (ENSSVLG00005003584) #19	FAM76A (ENSSVLG00005010519) #20	ENSSVLG00005010611	STX12 (ENSSVLG00005010643) #21	PPP1R8 (ENSSVLG00005010667) #22	THEMIS2 (ENSSVLG00005010773) #23	RPA2 (ENSSVLG00005010920) #24	SMPDL3B (ENSSVLG00005011082) #25	XKR8 (ENSSVLG00005011375) #26	ENSSVLG00005011412	EYA3 (ENSSVLG00005011513) #27	PTAFR (ENSSVLG00005011699) #28	DNAJC8 (ENSSVLG00005011722) #29	ATP5IF1 (ENSSVLG00005011758) #30	SESN2 (ENSSVLG00005011840) #31	MED18 (ENSSVLG00005011896) #32	ENSSVLG00005011930	PHACTR4 (ENSSVLG00005011991) #33	RCC1 (ENSSVLG00005012359) #34	TRNAU1AP (ENSSVLG00005012466) #35
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565 #7	ENSGT00940000160747 #9	ENSGT00940000156338 #10	ENSGT00950000182900.B #11	ENSGT00390000007371 #12	ENSGT00940000160932 #13	ENSGT00940000159398 #14	ENSGT00530000063929.a.b #15	ENSGT01060000248564.b.a.a.a #16	ENSGT00950000182962.b.a #17	ENSGT00390000018883 #18	ENSGT00940000157554 #19	ENSGT00940000160073 #20	ENSGT00940000156115 #22	ENSGT00530000063770.c.a #23	ENSGT00390000010045 #24	ENSGT00950000183182.a.a #25	ENSGT01090000260093.b #26	ENSGT00950000182978.B #27	ENSGT01060000248589.D #28	ENSGT00940000164617	ENSGT00390000006264 #30	ENSGT00950000183168.B.a #31	ENSGT00940000157582 #33	ENSGT00940000155543 #34	ENSGT00940000156139 #35	ENSGT00940000162094 #36	ENSGT00390000002144 #37	ENSGT00410000025596.a.b
Pika	MODERN SPECIES	527																ENSOPRG00000002214 #22	THEMIS2 (ENSOPRG00000002243) #23	RPA2 (ENSOPRG00000002255) #24	SMPDL3B (ENSOPRG00000002294) #25	XKR8 (ENSOPRG00000002313) #26	EYA3 (ENSOPRG00000002321) #27	PTAFR (ENSOPRG00000002354) #28
Rabbit	MODERN SPECIES	4	NR0B2 (ENSOCUG00000006416)	NUDC (ENSOCUG00000006418)	KDF1 (ENSOCUG00000006421) #7	ENSOCUG00000006426 #9	SLC9A1 (ENSOCUG00000023061) #10	WDTC1 (ENSOCUG00000016358) #11	TMEM222 (ENSOCUG00000007371) #12	SYTL1 (ENSOCUG00000002371) #13	MAP3K6 (ENSOCUG00000002379) #14	ENSOCUG00000007587 #15	GPR3 (ENSOCUG00000027272) #16	WASF2 (ENSOCUG00000002394) #17	AHDC1 (ENSOCUG00000008914) #18	FGR (ENSOCUG00000008922) #19	FAM76A (ENSOCUG00000014830) #20	PPP1R8 (ENSOCUG00000013594) #22	SMPDL3B (ENSOCUG00000012589) #25	EYA3 (ENSOCUG00000008020) #27	PTAFR (ENSOCUG00000017831) #28	ENSOCUG00000017932 #30	SESN2 (ENSOCUG00000014896) #31	PHACTR4 (ENSOCUG00000027528) #33	ENSOCUG00000002346 #34	ENSOCUG00000002353	RAB42 (ENSOCUG00000003933) #36	TAF12 (ENSOCUG00000003935) #37	GMEB1 (ENSOCUG00000010893)	YTHDF2 (ENSOCUG00000010612)	OPRD1 (ENSOCUG00000001033)	ENSOCUG00000030120	EPB41 (ENSOCUG00000006641)
Tree shrew	MODERN SPECIES	751															ENSTBEG00000000661 #21	ENSTBEG00000000687 #22