Actinopterygii ANCESTRAL SPECIES 129 ENSGT00940000158363 #26 ENSGT00390000002625 #25 ENSGT00940000159752 #24 ENSGT00940000162258 #17 ENSGT00940000156066 #15 ENSGT00890000139406.a #14 ENSGT00940000160802 #19 ENSGT00550000074797.b ##18 ENSGT00390000001360 #22 ENSGT00940000155420.b ##23 ENSGT00390000009030 ENSGT00390000006762 #13 ENSGT00940000155932 #12 ENSGT01090000260005.a.a.b #11 ENSGT00940000177991 ENSGT00940000176334 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995 ENSGT00940000155713 ENSGT00940000155599 ENSGT00940000164085.d.b ENSGT00390000000288 ENSGT00940000156706 Neopterygii ANCESTRAL SPECIES 267 ENSGT00940000158363 #26 ENSGT00390000002625 #25 ENSGT00940000159752 #24 ENSGT00940000162258 #17 ENSGT00940000156066 #15 ENSGT00890000139406.a #14 ENSGT00940000160802 #19 ENSGT00990000204401 #20 ENSGT00550000074797.b ##18 ENSGT00390000001360 #22 ENSGT00940000155420.a.b ##23 ENSGT00940000155420.a.a #23 ENSGT00390000009030 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 20 ENSGT01090000260005.a.a.b.b ##11 ENSGT00940000155932.b.b ##12 ENSGT00390000006762.d ##13 ENSGT00940000177991 ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155768.A ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00550000074797.b ##18 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000166439 #27 ENSGT00940000158363 #26 Otomorpha ANCESTRAL SPECIES 44 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.hb.a.a ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00940000166439 #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e #30 ENSGT00940000166189 ENSGT00940000160984 ENSGT00940000166134 ENSGT00940000156163.i.a #37 ENSGT00940000159690.a #33 ENSGT00890000139503 #36 ENSGT00940000157806.e #35 Cyprinoidei ANCESTRAL SPECIES 4 ENSGT00940000163767.a.a.j ##9 ENSGT00940000163767.a.a.i.a ##9 ENSGT00940000163767.a.a.i.b #9 ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258.kb.a.b.b #16 ENSGT00940000162258.kb.a.a.b #17 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752.i #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00940000166439 #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e #30 ENSGT00390000001742.b #31 ENSGT00390000007999 #32 ENSGT00940000179201 #34 ENSGT00940000157806.e #35 ENSGT00890000139503 #36 ENSGT00940000159690.a #33 ENSGT00940000156163.i.a #37 Cyprininae ANCESTRAL SPECIES 14 ENSGT00940000163767.a.a.i.a ##9 ENSGT00940000163767.a.a.i.b #9 ENSGT00940000167295.a #10 ENSGT01090000260005.a.a.b.a.b.b #11 ENSGT00940000155932.b.a.b #12 ENSGT00390000006762.c.a #13 ENSGT00890000139406.a.ab #14 ENSGT00940000156066.o.a #15 ENSGT00940000162258.kb.a.b.b.b #16 ENSGT00550000074797.a.a.b #18 ENSGT00940000162258.kb.a.a.b.b #17 ENSGT00940000162258.kb.a.a.a.a ##17 ENSGT00940000160802.a.d #19 ENSGT00990000204401.a #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b.a #22 ENSGT00940000155420.a.a.h #23 ENSGT00390000009030 ENSGT00940000159752.i.b #24 ENSGT00390000002625 #25 ENSGT00940000158363.i #26 ENSGT00940000158363.j ##26 ENSGT00940000166439.l ##27 ENSGT00390000002453.a.a ##28 ENSGT00940000158096.e.d ##30 ENSGT00390000001742.b.a ##31 ENSGT00390000007999.k.a ##32 ENSGT00940000157806.e.a ##35 ENSGT00890000139503.b ##36 ENSGT00940000159690.a.a ##33 ENSGT00940000156163.i.a.b ##37 Common carp reference MODERN SPECIES 26 or71aq1 (ENSCCRG00000066985) #7 or71aq1 (ENSCCRG00000078348) #8 or71aq1 (ENSCCRG00000057034) #9 zgc:171927 (ENSCCRG00000026319) #10 ENSCCRG00000079737 #11 vezf1b (ENSCCRG00000072066) #12 cuedc1b (ENSCCRG00000026326) #13 wsb1 (ENSCCRG00000021312) #14 ENSCCRG00000080609 #15 ENSCCRG00000021401 #16 lgals9l4 (ENSCCRG00000078869) #17 ENSCCRG00000065623 #18 ENSCCRG00000060026 #19 ENSCCRG00000063026 #20 ENSCCRG00000039492 #21 akap1b (ENSCCRG00000026347) #22 msi2b (ENSCCRG00000077313) #23 nos2b (ENSCCRG00000002048) #24 lyrm9 (ENSCCRG00000002540) #25 nlk2 (ENSCCRG00000045476) #26 ENSCCRG00000045470 #27 ENSCCRG00000045887 #28 ENSCCRG00000022019 #29 ENSCCRG00000049207 #30 zgc:153372 (ENSCCRG00000028305) #31 ENSCCRG00000028300 #32 ENSCCRG00000057215 #33 si:ch211-207n23.2 (ENSCCRG00000068793) #34 samsn1a (ENSCCRG00000021531) #35 hspa13 (ENSCCRG00000074795) #36 serpinh1b (ENSCCRG00000024067) #37 Cyprininae ANCESTRAL SPECIES 449 ENSGT00940000163767.a.b ##9 ENSGT00940000165062.f ENSGT00940000165062.e.b.b ENSGT00940000163767.a.a.j.b ##9 ENSGT00940000167295.b ##10 ENSGT01090000260005.a.a.b.a.b.a ##11 ENSGT00940000155932.b.a.a ##12 ENSGT00390000006762.c.b ##13 ENSGT00890000139406.a.`b ##14 ENSGT00940000156066.o.b ##15 ENSGT00940000162258.kb.a.b.b.a ##17 ENSGT00940000162258.kb.a.a.b.a ##17 ENSGT00940000162258.kb.a.b.a ##17 ENSGT00940000160802.a.c ##19 ENSGT00550000074797.a.a.a ##18 ENSGT00390000001360.q.b.b ##22 ENSGT00940000155420.a.b.b ##23 Goldfish MODERN SPECIES 34 SLC25A36 (ENSCARG00000034257) ENSCARG00000034212 ENSCARG00000034196 ENSCARG00000034180 ##18 ENSCARG00000034169 ##17 ENSCARG00000034115 ##17 ENSCARG00000034050 ##15 wsb1 (ENSCARG00000034018) ##14 ENSCARG00000034003 cuedc1b (ENSCARG00000033982) ##13 vezf1b (ENSCARG00000033960) ##12 ENSCARG00000032192 OMG (ENSCARG00000032138) ##19 ENSCARG00000032129 ##20 NF1 (ENSCARG00000031607) ##18 akap1b (ENSCARG00000031328) ##22 ENSCARG00000031307 ##23 GABBR1 (ENSCARG00000029208) tnfb (ENSCARG00000029116) lta (ENSCARG00000029107) bag6 (ENSCARG00000028999) tspan13a (ENSCARG00000028961) ankmy2a (ENSCARG00000028499) sostdc1a (ENSCARG00000028480) MEOX2 (ENSCARG00000028458) agmo (ENSCARG00000028436) etv1 (ENSCARG00000027818) arl4aa (ENSCARG00000027793) tmem106ba (ENSCARG00000027784) ENSCARG00000027777 mag (ENSCARG00000027761) Cyprininae_a ANCESTRAL SPECIES 28 ENSGT00950000182847.b.a.g.a ENSGT00940000163767.a.b ##9 ENSGT00940000165062.f ENSGT00940000165062.e.b.b ENSGT00940000163767.a.a.j.b ##9 ENSGT00940000167295.b ##10 ENSGT01090000260005.a.a.b.a.b.a ##11 ENSGT00940000155932.b.a.a ##12 ENSGT00390000006762.c.b ##13 ENSGT00890000139406.a.`b ##14 ENSGT00940000156066.o.b ##15 ENSGT00940000162258.kb.a.b.b.a ##17 ENSGT00940000162258.kb.a.b.a ##17 ENSGT00940000160802.a.c ##19 ENSGT00550000074797.a.a.a ##18 ENSGT00390000001360.q.b.b ##22 ENSGT00940000155420.a.a.g ##23 ENSGT00940000159752.i.a ##24 ENSGT00940000159752.i.b #24 ENSGT00390000002625 #25 ENSGT00940000158363.j ##26 ENSGT00940000166439.l ##27 ENSGT00390000002453.a.a ##28 ENSGT00940000158096.e.d ##30 ENSGT00390000001742.b.a ##31 ENSGT00390000007999.k.a ##32 ENSGT00940000157806.e.a ##35 ENSGT00890000139503.b ##36 ENSGT00940000159690.a.a ##33 ENSGT00940000156163.i.a.b ##37 ENSGT00940000166134.a Common carp reference MODERN SPECIES 39 or71ar1 (ENSCCRG00000057767) ENSCCRG00000055656 ##9 or71ar1 (ENSCCRG00000076608) or71as2 (ENSCCRG00000071700) or71at1 (ENSCCRG00000066522) ##9 zgc:171927 (ENSCCRG00000070633) ##10 ENSCCRG00000081054 ##11 vezf1b (ENSCCRG00000021299) ##12 ENSCCRG00000079289 cuedc1b (ENSCCRG00000021302) ##13 wsb1 (ENSCCRG00000071488) ##14 ENSCCRG00000021332 ##15 ENSCCRG00000057259 ##17 ENSCCRG00000068838 ##19 ENSCCRG00000074513 ##18 akap1b (ENSCCRG00000028319) ##22 msi2b (ENSCCRG00000032061) ##23 nos2b (ENSCCRG00000001890) ##24 nlk2 (ENSCCRG00000002027) ##26 ENSCCRG00000045885 ##27 ENSCCRG00000045422 ##28 ENSCCRG00000011790 ##30 zgc:153372 (ENSCCRG00000028273) ##31 ENSCCRG00000028270 ##32 samsn1a (ENSCCRG00000039962) ##35 hspa13 (ENSCCRG00000082266) ##36 ENSCCRG00000052898 ##33 serpinh1b (ENSCCRG00000023068) ##37 gucy2f (ENSCCRG00000023369) tsku (ENSCCRG00000063835) ENSCCRG00000020267 Golden-line barbel MODERN SPECIES 160 ENSSGRG00000031385 utp23 (ENSSGRG00000031384) or71as2 (ENSSGRG00000031382) or71at1 (ENSSGRG00000031380) ##9 or71aq2 (ENSSGRG00000031377) ##9 or71aq1 (ENSSGRG00000031375) #9 zgc:171927 (ENSSGRG00000031374) ##10 ENSSGRG00000031373 ##11 vezf1b (ENSSGRG00000031371) ##12 cuedc1b (ENSSGRG00000031361) ##13 wsb1 (ENSSGRG00000031358) ##14 KSR1 (ENSSGRG00000031353) ##15 ENSSGRG00000031351 ##17 OMG (ENSSGRG00000031350) ##19 NF1 (ENSSGRG00000031139) ##18 akap1b (ENSSGRG00000031100) ##22 msi2b (ENSSGRG00000031096) ##23 nos2b (ENSSGRG00000030890) ##24 lyrm9 (ENSSGRG00000030886) #25 nlk2 (ENSSGRG00000030841) ##26 ENSSGRG00000030839 ##27 ENSSGRG00000030838 ##28 kcnk2b (ENSSGRG00000030836) smyd2b (ENSSGRG00000030832) ENSSGRG00000030831 Zebrafish MODERN SPECIES 6 or71aq1 (ENSDARG00000054734) #9 zgc:171927 (ENSDARG00000033056) #10 ENSDARG00000054744 vezf1b (ENSDARG00000061030) #12 cuedc1b (ENSDARG00000054748) #13 wsb1 (ENSDARG00000021343) #14 KSR1 (ENSDARG00000030933) #15 lgals9l3 (ENSDARG00000041060) #16 lgals9l1 (ENSDARG00000025903) #16 lgals9l4 (ENSDARG00000069058) #17 ENSDARG00000030025 lgals9l5 (ENSDARG00000087311) #17 ENSDARG00000093059 #17 OMG (ENSDARG00000089444) #19 NF1 (ENSDARG00000012982) #18 akap1b (ENSDARG00000006062) #22 msi2b (ENSDARG00000032614) #23 mrps23 (ENSDARG00000033973) nos2b (ENSDARG00000031976) #24 lyrm9 (ENSDARG00000075528) #25 nlk2 (ENSDARG00000028793) #26 ENSDARG00000069066 #27 zgc:153372 (ENSDARG00000068967) #31 NRIP1 (ENSDARG00000068965) #32 si:ch211-207n23.2 (ENSDARG00000097157) #34 samsn1a (ENSDARG00000054543) #35 hspa13 (ENSDARG00000040984) #36 ENSDARG00000109743 ENSDARG00000110949 GDPD5 (ENSDARG00000076962) #33 serpinh1b (ENSDARG00000019949) #37 Characiphysae ANCESTRAL SPECIES 39 ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 Channel catfish MODERN SPECIES 8 ENSIPUG00000003058 capns1b (ENSIPUG00000003072) zgc:101731 (ENSIPUG00000003084) zgc:113149 (ENSIPUG00000003100) ENSIPUG00000003109 ENSIPUG00000003120 ##11 vezf1b (ENSIPUG00000003133) #12 cuedc1 (ENSIPUG00000003146) #13 wsb1 (ENSIPUG00000003159) #14 KSR1 (ENSIPUG00000003191) #15 leg9 (ENSIPUG00000003208) #17 ENSIPUG00000003282 #17 NF1 (ENSIPUG00000003327) #18 ENSIPUG00000003649 #19 ENSIPUG00000003672 #20 akap1b (ENSIPUG00000003688) #22 msi2b (ENSIPUG00000003732) #23 bcas3 (ENSIPUG00000003829) tbx2b (ENSIPUG00000003849) tbx4 (ENSIPUG00000003877) brip1 (ENSIPUG00000003927) PPM1D (ENSIPUG00000003985) ccdc9 (ENSIPUG00000004001) kiaa0753 (ENSIPUG00000004058) ENSIPUG00000004096 ENSIPUG00000004116 slc47a4 (ENSIPUG00000004148) ENSIPUG00000004210 SLC13A5 (ENSIPUG00000004243) wdr81 (ENSIPUG00000004318) Serpinf2 (ENSIPUG00000004350) Characiphysae_b ANCESTRAL SPECIES 38 ENSGT00450000040324.a.a.b ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 Characoidei ANCESTRAL SPECIES 126 ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 Red-bellied piranha MODERN SPECIES 35 ENSPNAG00000029366 ENSPNAG00000029399 capns1b (ENSPNAG00000029489) zgc:101731 (ENSPNAG00000029495) zgc:113149 (ENSPNAG00000029503) zgc:171927 (ENSPNAG00000029574) #10 ENSPNAG00000000644 #11 vezf1b (ENSPNAG00000008086) #12 cuedc1b (ENSPNAG00000008108) #13 wsb1 (ENSPNAG00000000691) #14 KSR1 (ENSPNAG00000000724) #15 lgals9l3 (ENSPNAG00000008174) #17 OMG (ENSPNAG00000000745) #19 ENSPNAG00000008181 #20 NF1 (ENSPNAG00000000801) #18 akap1b (ENSPNAG00000000820) #22 msi2b (ENSPNAG00000000844) #23 bcas3 (ENSPNAG00000000853) tbx2b (ENSPNAG00000008293) tbx4 (ENSPNAG00000008302) brip1 (ENSPNAG00000008330) ppm1da (ENSPNAG00000000913) ccdc9 (ENSPNAG00000008356) ENSPNAG00000008373 ENSPNAG00000008411 ENSPNAG00000008421 ENSPNAG00000000998 slc47a4 (ENSPNAG00000001014) ENSPNAG00000001024 SLC13A5 (ENSPNAG00000005543) wdr81 (ENSPNAG00000008493) Mexicana tetra MODERN SPECIES zgc:101731 (ENSAMXG00000010391) zgc:113149 (ENSAMXG00000010393) zgc:171927 (ENSAMXG00000039486) #10 ENSAMXG00000031653 #11 vezf1b (ENSAMXG00000010401) #12 cuedc1b (ENSAMXG00000010406) #13 wsb1 (ENSAMXG00000010415) #14 KSR1 (ENSAMXG00000010429) #15 lgals9l3 (ENSAMXG00000034175) #17 ENSAMXG00000039083 NF1 (ENSAMXG00000010459) #18 ENSAMXG00000029686 ##29 OMG (ENSAMXG00000034967) #19 ENSAMXG00000030486 #20 ENSAMXG00000032503 #21 akap1b (ENSAMXG00000024876) #22 msi2b (ENSAMXG00000010474) #23 abcg4b (ENSAMXG00000010477) usf1 (ENSAMXG00000031994) ENSAMXG00000010515 ENSAMXG00000031116 ENSAMXG00000010565 ENSAMXG00000041862 ENSAMXG00000010569 ENSAMXG00000031127 usp2a (ENSAMXG00000043395) tbcela (ENSAMXG00000020422) ENSAMXG00000009216 ULK2 (ENSAMXG00000009215) aldh3a2a (ENSAMXG00000009213) ENSAMXG00000009212 Clupeiformes ANCESTRAL SPECIES 144 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00940000166439 #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e #30 ENSGT00390000001742.b #31 ENSGT00940000157806.e #35 ENSGT00890000139503 #36 ENSGT00940000159690.a #33 ENSGT00940000156163.i.a #37 ENSGT00940000166134 ENSGT00940000160984 Denticle herring MODERN SPECIES 4 trmt13 (ENSDCDG00000018422) sass6 (ENSDCDG00000018471) mfsd14a1 (ENSDCDG00000019306) ENSDCDG00000019530 clrn1 (ENSDCDG00000019596) MINDY4B (ENSDCDG00000019600) ENSDCDG00000019605 ENSDCDG00000019612 cuedc1b (ENSDCDG00000019616) #13 wsb1 (ENSDCDG00000019620) #14 KSR1 (ENSDCDG00000019631) #15 lgals9l3 (ENSDCDG00000019661) #17 NF1 (ENSDCDG00000020328) #18 ENSDCDG00000026057 #19 ENSDCDG00000026058 #20 akap1b (ENSDCDG00000026068) #22 msi2b (ENSDCDG00000026268) #23 nos2a (ENSDCDG00000026754) #24 lyrm9 (ENSDCDG00000029528) #25 nlk2 (ENSDCDG00000029571) #26 ENSDCDG00000029793 #27 ENSDCDG00000029794 #28 WSCD1 (ENSDCDG00000029797) #30 zgc:153372 (ENSDCDG00000029801) #31 ENSDCDG00000029804 #32 samsn1a (ENSDCDG00000029809) #35 hspa13 (ENSDCDG00000029814) #36 GDPD5 (ENSDCDG00000029821) #33 serpinh1b (ENSDCDG00000029832) #37 gucy2f (ENSDCDG00000029856) tsku (ENSDCDG00000030064) Atlantic herring MODERN SPECIES 25 ENSCHAG00000007100 ENSCHAG00000006911 rnf7 (ENSCHAG00000006880) ENSCHAG00000006813 RASA2 (ENSCHAG00000006137) ZBTB38 (ENSCHAG00000006114) fbxo36a (ENSCHAG00000006109) trip12 (ENSCHAG00000002859) dner (ENSCHAG00000002245) pid1 (ENSCHAG00000002196) wsb1 (ENSCHAG00000002160) #14 KSR1 (ENSCHAG00000001161) #15 lgals9l5 (ENSCHAG00000000430) #17 OMG (ENSCHAG00000000389) #19 NF1 (ENSCHAG00000025818) #18 akap1b (ENSCHAG00000025653) #22 msi2b (ENSCHAG00000025591) #23 mrps23 (ENSCHAG00000025579) NOS2 (ENSCHAG00000025326) #24 NOS2 (ENSCHAG00000024906) #24 lyrm9 (ENSCHAG00000024886) #25 nlk2 (ENSCHAG00000024771) #26 ENSCHAG00000024757 #27 ttc36 (ENSCHAG00000024754) NECTIN1 (ENSCHAG00000024747) ENSCHAG00000024741 TREH (ENSCHAG00000024719) DDX6 (ENSCHAG00000024686) bcl9l (ENSCHAG00000024677) cdon (ENSCHAG00000024463) aplp2 (ENSCHAG00000023782) Euteleosteomorpha ANCESTRAL SPECIES 175 ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000176334 ENSGT00940000165699.A.a.b ENSGT00940000162258 #17 ENSGT00940000156066.o #15 ENSGT00890000139406.a #14 ENSGT00390000006762.c #13 ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00390000002453.a #28 ENSGT00940000158096.e #30 ENSGT00940000166134 ENSGT00940000156163.i.a #37 ENSGT00940000159690.a #33 ENSGT00890000139503 #36 ENSGT00940000157806.e #35 ENSGT00980000202692 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000176334 ENSGT00940000177991 ENSGT00940000165699.A.a.b ENSGT00940000162258 #17 ENSGT00940000156066.o #15 ENSGT00890000139406.a #14 ENSGT00390000006762.c #13 ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00390000002453.a #28 ENSGT00940000158096.e #30 ENSGT00940000166134 ENSGT00940000156163.i.a #37 ENSGT00940000159690.a #33 ENSGT00890000139503 #36 ENSGT00940000157806.e #35 ENSGT00980000202692 ENSGT00990000205159 ENSGT00390000011810 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 404 ENSGT01090000260005.a.a.b.a.a.b ##11 ENSGT00550000074797.a.a.c #18 ENSGT00940000160802.a.b #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b.c #22 ENSGT00940000155420.a.b.d.b.b ##23 ENSGT00940000155420.a.b.c ##23 ENSGT00390000009030.s ENSGT00940000159752.q #24 ENSGT00940000158363.k #26 ENSGT00940000166439.h.b #27 ENSGT00970000193381.a.a.c.b.b.a.b ENSGT00940000158096.e.e #30 ENSGT00940000166134.c ENSGT00940000156163.i.a.d #37 ENSGT00940000159690.a.d #33 ENSGT00890000139503.f #36 ENSGT00940000157806.e.e #35 ENSGT00990000205159.b ENSGT00390000011810.i Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000155599.i.a.a.j ENSGT00940000155599.i.a.a.i.a ENSGT00940000155713.qb.a ENSGT00940000156995.a.d.b ENSGT00940000155768.B.q.b ENSGT00940000165699.A.a.b.f ENSGT00940000162258.vb.a #17 ENSGT00940000156066.o.c #15 ENSGT00890000139406.a.y #14 ENSGT00390000006762.c.c #13 ENSGT00940000155932.b.a.c #12 ENSGT01090000260005.a.a.b.a.a.b ##11 ENSGT00550000074797.a.a.c #18 ENSGT00940000160802.a.b #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b.c #22 ENSGT00940000155420.a.a.d #23 ENSGT00390000009030.s ENSGT00940000159752.q #24 ENSGT00940000158363.k #26 ENSGT00940000166439.h.b #27 ENSGT00970000193381.a.a.c.b.b.a.b ENSGT00940000158096.e.e #30 ENSGT00940000166134.c ENSGT00940000156163.i.a.d #37 ENSGT00940000159690.a.d #33 ENSGT00890000139503.f #36 ENSGT00940000157806.e.e #35 ENSGT00990000205159.b ENSGT00390000011810.i ENSGT00940000153123.A Salmo ANCESTRAL SPECIES 7 ENSGT00940000155599.j.e ENSGT00940000155599.i.a.a.j ENSGT00940000155713.qb.a ENSGT00940000156995.a.d.b ENSGT00940000155768.B.q.b ENSGT00940000165699.A.a.b.f ENSGT00940000162258.vb.a #17 ENSGT00940000156066.o.c #15 ENSGT00890000139406.a.y #14 ENSGT00390000006762.c.c #13 ENSGT00940000155932.b.a.c #12 ENSGT01090000260005.a.a.b.a.a.b ##11 ENSGT00550000074797.a.a.c #18 ENSGT00940000160802.a.b #19 ENSGT00990000204401.c #20 ENSGT00390000001360.q.b.c #22 ENSGT00940000155420.a.a.d #23 ENSGT00390000009030.s ENSGT00940000159752.q #24 ENSGT00940000158363.k #26 ENSGT00940000166439.h.b #27 ENSGT00940000158096.e.e #30 ENSGT00940000166134.c ENSGT00940000156163.i.a.d #37 ENSGT00940000159690.a.d #33 ENSGT00890000139503.f #36 ENSGT00940000157806.e.e #35 ENSGT00990000205159.b ENSGT00390000011810.i ENSGT00940000153123.A ENSGT00390000005285 River trout MODERN SPECIES 18 dhrs13a.3 (ENSSTUG00000004342) PHF12 (ENSSTUG00000004410) SEZ6 (ENSSTUG00000004459) MYO18A (ENSSTUG00000004960) ENSSTUG00000010815 ENSSTUG00000010849 #17 KSR1 (ENSSTUG00000010860) #15 ENSSTUG00000010875 wsb1 (ENSSTUG00000010881) #14 cuedc1b (ENSSTUG00000010891) #13 vezf1b (ENSSTUG00000010914) #12 ENSSTUG00000010979 ##11 NF1 (ENSSTUG00000010996) #18 ENSSTUG00000011359 #19 ENSSTUG00000011368 #20 akap1b (ENSSTUG00000011390) #22 msi2b (ENSSTUG00000011533) #23 mrps23 (ENSSTUG00000011788) NOS2 (ENSSTUG00000011802) #24 nlk2 (ENSSTUG00000011871) #26 ENSSTUG00000012107 #27 WSCD1 (ENSSTUG00000012143) #30 gucy2f (ENSSTUG00000012216) serpinh1b (ENSSTUG00000012358) #37 GDPD5 (ENSSTUG00000012373) #33 hspa13 (ENSSTUG00000012474) #36 samsn1a (ENSSTUG00000012488) #35 ENSSTUG00000012524 ENSSTUG00000012534 ENSSTUG00000012541 usp16 (ENSSTUG00000012568) Atlantic salmon MODERN SPECIES 12 dhrs13b.1 (ENSSSAG00000055480) PHF12 (ENSSSAG00000055497) SEZ6 (ENSSSAG00000055511) MYO18A (ENSSSAG00000055619) ENSSSAG00000056086 ENSSSAG00000098296 #17 ENSSSAG00000056163 #15 wsb1 (ENSSSAG00000084593) #14 cuedc1b (ENSSSAG00000056239) #13 vezf1b (ENSSSAG00000056298) #12 ENSSSAG00000070842 ##11 ENSSSAG00000056388 #18 ENSSSAG00000083601 #19 ENSSSAG00000056863 #20 ENSSSAG00000113509 akap1b (ENSSSAG00000056882) #22 msi2b (ENSSSAG00000071542) #23 ENSSSAG00000090931 mrps23 (ENSSSAG00000057153) ENSSSAG00000057180 #24 nlk2 (ENSSSAG00000057234) #26 ENSSSAG00000100698 #27 ENSSSAG00000057427 #30 gucy2f (ENSSSAG00000057682) serpinh1b (ENSSSAG00000065393) #37 ENSSSAG00000065408 #33 stch (ENSSSAG00000088782) #36 SAMN1 (ENSSSAG00000065460) #35 ENSSSAG00000065484 ENSSSAG00000065487 ENSSSAG00000065499 Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00940000155599.j.e ENSGT00940000155599.i.a.a.j ENSGT00940000155599.i.a.a.i.a ENSGT00940000155713.qb.a ENSGT00940000156995.a.d.a.a ENSGT00940000155768.B.q.b ENSGT00940000162258.vb.a #17 ENSGT00940000156066.o.c #15 ENSGT00890000139406.a.y #14 ENSGT00390000006762.c.c #13 ENSGT00940000155932.b.a.c #12 ENSGT01090000260005.a.a.b.a.a.b ##11 ENSGT00550000074797.a.a.c #18 ENSGT00940000160802.a.b #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b.c #22 ENSGT00940000155420.a.a.d #23 ENSGT00390000009030.s ENSGT00940000159752.q #24 ENSGT00940000158363.k #26 ENSGT00940000166439.h.b #27 ENSGT00970000193381.a.a.c.b.b.a.b ENSGT00940000158096.e.e #30 ENSGT00940000166134.c ENSGT00940000156163.i.a.d #37 ENSGT00940000159690.a.d #33 ENSGT00890000139503.f #36 ENSGT00940000157806.e.e #35 ENSGT00990000205159.b ENSGT00940000153123.A ENSGT00390000005285 Rainbow trout MODERN SPECIES 19 SEZ6 (ENSOMYG00000028446) MYO18A (ENSOMYG00000029799) ENSOMYG00000032674 ENSOMYG00000032686 #17 ENSOMYG00000032715 #15 ENSOMYG00000063632 wsb1 (ENSOMYG00000032742) #14 cuedc1b (ENSOMYG00000032761) #13 vezf1b (ENSOMYG00000032831) #12 ENSOMYG00000032866 ##11 ENSOMYG00000032869 #18 ENSOMYG00000057287 ENSOMYG00000033382 #18 ENSOMYG00000076567 #19 ENSOMYG00000035052 #20 akap1b (ENSOMYG00000035066) #22 msi2b (ENSOMYG00000035125) #23 mrps23 (ENSOMYG00000035201) ENSOMYG00000035595 #24 nlk2 (ENSOMYG00000037722) #26 ENSOMYG00000037751 #27 ENSOMYG00000037758 ENSOMYG00000037810 #30 gucy2f (ENSOMYG00000038430) hsp47 (ENSOMYG00000041445) #37 ENSOMYG00000041453 #33 hspa13 (ENSOMYG00000069516) #36 samsn1a (ENSOMYG00000041461) #35 ENSOMYG00000058562 ENSOMYG00000041468 ENSOMYG00000053474 Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00940000155599.j.e ENSGT00940000155599.i.a.a.j ENSGT00940000155599.i.a.a.i.a ENSGT00940000155713.qb.a ENSGT00940000156995.a.d.a.a ENSGT00940000155768.B.q.b ENSGT00940000162258.vb.a #17 ENSGT00940000156066.o.c #15 ENSGT00890000139406.a.y #14 ENSGT00390000006762.c.c #13 ENSGT00940000155932.b.a.c #12 ENSGT01090000260005.a.a.b.a.a.b ##11 ENSGT00550000074797.a.a.c.b #18 ENSGT00940000160802.a.b #19 ENSGT00990000204401 #20 ENSGT00390000001360.q.b.c #22 ENSGT00940000155420.a.b.d.b.a ##23 ENSGT00940000155420.a.b.c ##23 ENSGT00390000009030.s ENSGT00940000159752.q #24 ENSGT00940000158363.k #26 ENSGT00940000166439.h.b #27 ENSGT00970000193381.a.a.c.b.b.a.b ENSGT00940000158096.e.e #30 ENSGT00940000166134.c ENSGT00940000156163.i.a.d #37 ENSGT00940000159690.a.d #33 ENSGT00890000139503.f #36 ENSGT00940000157806.e.e #35 ENSGT00990000205159.b ENSGT00390000011810.i Coho salmon MODERN SPECIES 6 lhx1a (ENSOKIG00005006504) dhrs13a.3 (ENSOKIG00005006517) dhrs13b.1 (ENSOKIG00005006552) PHF12 (ENSOKIG00005006561) SEZ6 (ENSOKIG00005006613) MYO18A (ENSOKIG00005007626) ENSOKIG00005014527 #17 KSR1 (ENSOKIG00005014563) #15 wsb1 (ENSOKIG00005014612) #14 cuedc1b (ENSOKIG00005014750) #13 vezf1b (ENSOKIG00005014779) #12 ENSOKIG00005014804 ##11 NF1 (ENSOKIG00005014978) #18 ENSOKIG00005017239 #19 ENSOKIG00005017242 #20 akap1b (ENSOKIG00005017259) #22 msi2b (ENSOKIG00005017306) #23 ENSOKIG00005017496 mrps23 (ENSOKIG00005017504) ENSOKIG00005017518 NOS2 (ENSOKIG00005017538) #24 nlk2 (ENSOKIG00005017870) #26 ENSOKIG00005017926 #27 ENSOKIG00005017938 WSCD1 (ENSOKIG00005017946) #30 gucy2f (ENSOKIG00005018071) serpinh1b (ENSOKIG00005021108) #37 GDPD5 (ENSOKIG00005021129) #33 hspa13 (ENSOKIG00005021193) #36 samsn1a (ENSOKIG00005021214) #35 ENSOKIG00005021258 Chinook salmon MODERN SPECIES 4 ULK2 (ENSOTSG00005011127) DHRS13 (ENSOTSG00005011343) dhrs13b.1 (ENSOTSG00005011345) dhrs13b.1 (ENSOTSG00005011346) PHF12 (ENSOTSG00005011349) SEZ6 (ENSOTSG00005011354) MYO18A (ENSOTSG00005012952) KSR1 (ENSOTSG00005027642) #15 wsb1 (ENSOTSG00005027682) #14 cuedc1b (ENSOTSG00005027909) #13 vezf1b (ENSOTSG00005027910) #12 ENSOTSG00005027912 ##11 ENSOTSG00005027913 #18 ENSOTSG00005028318 #19 ENSOTSG00005028319 #20 akap1b (ENSOTSG00005028321) #22 MSI2 (ENSOTSG00005028322) ##23 ENSOTSG00005028326 ##23 mrps23 (ENSOTSG00005028327) ENSOTSG00005028330 #24 ENSOTSG00005029399 nlk2 (ENSOTSG00005029409) #26 ENSOTSG00005029412 #27 ENSOTSG00005029415 WSCD1 (ENSOTSG00005029420) #30 gucy2f (ENSOTSG00005029455) serpinh1b (ENSOTSG00005036560) #37 GDPD5 (ENSOTSG00005036561) #33 EPHA4 (ENSOTSG00005036563) pax3b (ENSOTSG00005036564) ENSOTSG00005036565 Huchen MODERN SPECIES 2680 ENSHHUG00000042069 ##11 NF1 (ENSHHUG00000042073) #18 ENSHHUG00000042154 #19 ENSHHUG00000042161 #20 akap1b (ENSHHUG00000042164) #22 MSI2 (ENSHHUG00000042186) ##23 Salmoninae ANCESTRAL SPECIES 246 ENSGT00940000155599.i.a.a.i.b ENSGT00940000155713.qb.b ENSGT00940000156995.a.c ENSGT00390000011000 ENSGT00940000155768.B.q.a ENSGT00940000177991 ENSGT00940000165699.A.a.b.e ENSGT00940000162258.vb.b #17 ENSGT00940000156066.o.d #15 ENSGT00890000139406.a.z #14 ENSGT00390000006762.c.d #13 ENSGT00940000155932.b.a.d #12 ENSGT01090000260005.a.a.b.a.a.a ##11 ENSGT00550000074797.a.a.d #18 ENSGT00940000160802.a.a #19 ENSGT00390000001360.q.b.d #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030.t ENSGT00940000159752.r #24 ENSGT00390000002625 #25 ENSGT00940000158363.l #26 ENSGT00940000166439.h.a #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e.f #30 ENSGT00940000166134.d ENSGT00940000156163.i.a.c #37 ENSGT00940000159690.a.c #33 ENSGT00890000139503.e #36 ENSGT00940000157806.e.f #35 ENSGT00990000205159.a ENSGT00390000011810.j Salmoninae_a ANCESTRAL SPECIES 56 ENSGT00940000155599.i.a.a.i.b ENSGT00940000155713.qb.b ENSGT00940000156995.a.c ENSGT00390000011000 ENSGT00940000155768.B.q.a ENSGT00940000177991 ENSGT00940000165699.A.a.b.e ENSGT00940000162258.vb.b #17 ENSGT00940000156066.o.d #15 ENSGT00890000139406.a.z #14 ENSGT00390000006762.c.d #13 ENSGT00940000155932.b.a.d #12 ENSGT01090000260005.a.a.b.a.a.a ##11 ENSGT00550000074797.a.a.d #18 ENSGT00940000160802.a.a #19 ENSGT00390000001360.q.b.d #22 ENSGT00940000155420.a.a.c #23 ENSGT00390000009030.t ENSGT00940000159752.r #24 ENSGT00390000002625 #25 ENSGT00940000158363.l #26 ENSGT00940000166439.h.a #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e.f #30 ENSGT00940000166134.d ENSGT00940000156163.i.a.c #37 ENSGT00940000159690.a.c #33 ENSGT00890000139503.e #36 ENSGT00940000157806.e.f #35 ENSGT00990000205159.a ENSGT00390000011810.j Salmo ANCESTRAL SPECIES 18 ENSGT00940000155713.rb.b ENSGT00940000156995.b.d ENSGT00390000011000 ENSGT00940000155768.B.q.a ENSGT00940000165699.A.a.b.e ENSGT00940000165699.A.b ENSGT00940000162258.vb.b #17 ENSGT00940000156066.o.d #15 ENSGT00890000139406.a.z #14 ENSGT00390000006762.c.d #13 ENSGT00940000155932.b.a.d #12 ENSGT01090000260005.a.a.b.a.a.a ##11 ENSGT00550000074797.a.a.d #18 ENSGT00940000160802.a.a #19 ENSGT00990000204401.d #20 ENSGT00390000001360.q.b.d #22 ENSGT00940000155420.a.a.c #23 ENSGT00390000009030.t ENSGT00940000159752.r #24 ENSGT00390000002625 #25 ENSGT00940000158363.l #26 ENSGT00940000166439.h.a #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e.f #30 ENSGT00940000166134.d ENSGT00940000156163.i.a.c #37 ENSGT00940000159690.a.c #33 ENSGT00890000139503.e #36 ENSGT00940000157806.e.f #35 ENSGT00990000205159.a ENSGT00390000011810.j River trout MODERN SPECIES 4 dhrs13b.1 (ENSSTUG00000034525) PHF12 (ENSSTUG00000034554) SEZ6 (ENSSTUG00000034580) pipox (ENSSTUG00000034662) MYO18A (ENSSTUG00000034787) ENSSTUG00000036592 ENSSTUG00000036610 ENSSTUG00000036621 #17 KSR1 (ENSSTUG00000036710) #15 wsb1 (ENSSTUG00000036747) #14 cuedc1b (ENSSTUG00000036801) #13 vezf1b (ENSSTUG00000036842) #12 ENSSTUG00000036905 ##11 NF1 (ENSSTUG00000036953) #18 ENSSTUG00000038005 #19 akap1b (ENSSTUG00000038016) #22 msi2b (ENSSTUG00000038122) #23 mrps23 (ENSSTUG00000038314) NOS2 (ENSSTUG00000038401) #24 lyrm9 (ENSSTUG00000039698) #25 nlk2 (ENSSTUG00000039716) #26 ENSSTUG00000039979 #27 ENSSTUG00000039988 #28 WSCD1 (ENSSTUG00000040001) #30 gucy2f (ENSSTUG00000040113) serpinh1b (ENSSTUG00000042971) #37 GDPD5 (ENSSTUG00000042993) #33 hspa13 (ENSSTUG00000043236) #36 samsn1a (ENSSTUG00000043241) #35 ENSSTUG00000043248 med17 (ENSSTUG00000043262) Atlantic salmon MODERN SPECIES 28 SEZ6 (ENSSSAG00000069732) pipox (ENSSSAG00000069983) ENSSSAG00000070052 ENSSSAG00000070734 ENSSSAG00000070740 ENSSSAG00000070750 #17 ENSSSAG00000070758 #15 wsb1 (ENSSSAG00000070790) #14 cuedc1b (ENSSSAG00000070803) #13 ENSSSAG00000085952 ##11 vezf1b (ENSSSAG00000070824) #12 ENSSSAG00000070859 #18 ENSSSAG00000072993 ENSSSAG00000118477 #19 ENSSSAG00000071480 #20 akap1b (ENSSSAG00000071490) #22 msi2b (ENSSSAG00000057059) #23 mrps23 (ENSSSAG00000072946) ENSSSAG00000072987 #24 lyrm9 (ENSSSAG00000074333) #25 nlk2 (ENSSSAG00000074339) #26 ENSSSAG00000083713 ENSSSAG00000074378 #27 ENSSSAG00000074379 #28 ENSSSAG00000074382 #30 gucy2f (ENSSSAG00000010411) serpinh1b (ENSSSAG00000032055) #37 ENSSSAG00000032297 #33 hspa13 (ENSSSAG00000085013) #36 samsn1a (ENSSSAG00000033051) #35 ENSSSAG00000122223 Oncorhynchus ANCESTRAL SPECIES 57 ENSGT00940000155599.i.a.a.i.b ENSGT00940000155713.qb.b ENSGT00940000156995.a.c ENSGT00390000011000 ENSGT00940000155768.B.q.a ENSGT00940000177991 ENSGT00940000165699.A.a.b.e ENSGT00940000162258.vb.b #17 ENSGT00940000156066.o.d #15 ENSGT00890000139406.a.z #14 ENSGT00390000006762.c.d #13 ENSGT00940000155932.b.a.d #12 ENSGT01090000260005.a.a.b.a.a.a ##11 ENSGT00550000074797.a.a.d #18 ENSGT00940000160802.a.a #19 ENSGT00390000001360.q.b.d #22 ENSGT00940000155420.a.b.d.b.b ##23 ENSGT00940000155420.a.b.c ##23 ENSGT00390000009030.t ENSGT00940000159752.r #24 ENSGT00390000002625 #25 ENSGT00940000158363.l.b #26 ENSGT00940000166439.h.a #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e.f #30 ENSGT00940000166134.d ENSGT00940000156163.i.a.c #37 ENSGT00940000159690.a.c #33 ENSGT00890000139503.e #36 ENSGT00940000157806.e.f #35 ENSGT00990000205159.a Oncorhynchus_a ANCESTRAL SPECIES 78 ENSGT00940000164085.d.b.o ENSGT00940000155599.i.a.a.i.b ENSGT00940000155713.qb.b ENSGT00940000156995.a.c ENSGT00390000011000 ENSGT00940000155768.B.q.a ENSGT00940000177991 ENSGT00940000165699.A.a.b.e ENSGT00940000162258.vb.b #17 ENSGT00940000156066.o.d #15 ENSGT00890000139406.a.z #14 ENSGT00390000006762.c.d #13 ENSGT00940000155932.b.a.d #12 ENSGT01090000260005.a.a.b.a.a.a ##11 ENSGT00940000160802.a.a #19 ENSGT00390000001360.q.b.d #22 ENSGT00940000155420.a.b.d.b.b ##23 ENSGT00390000009030.t ENSGT00940000159752.r #24 ENSGT00390000002625 #25 ENSGT00940000158363.l.b #26 ENSGT00940000166439.h.a #27 ENSGT00390000002453.a #28 ENSGT00940000158096.e.f #30 ENSGT00940000166134.d ENSGT00940000156163.i.a.c #37 ENSGT00940000159690.a.c #33 ENSGT00890000139503.e #36 ENSGT00940000157806.e.f #35 ENSGT00990000205159.a ENSGT00390000011810.j Chinook salmon MODERN SPECIES 5 ENSOTSG00005042244 dhrs13b.1 (ENSOTSG00005042247) PHF12 (ENSOTSG00005042248) SEZ6 (ENSOTSG00005042249) ENSOTSG00005042250 pipox (ENSOTSG00005042252) ENSOTSG00005042253 ENSOTSG00005042265 ENSOTSG00005042266 lgals9l5 (ENSOTSG00005042267) #17 KSR1 (ENSOTSG00005042269) #15 wsb1 (ENSOTSG00005042276) #14 vezf1b (ENSOTSG00005042474) #12 ENSOTSG00005042476 ##11 ENSOTSG00005042549 #19 akap1b (ENSOTSG00005042556) #22 ENSOTSG00005042558 ##23 ENSOTSG00005042559 ENSOTSG00005042562 mfsd2ab (ENSOTSG00005042563) ENSOTSG00005042582 ##23 mrps23 (ENSOTSG00005042583) NOS2 (ENSOTSG00005042591) #24 lyrm9 (ENSOTSG00005043383) #25 nlk2 (ENSOTSG00005043384) #26 ENSOTSG00005043386 #27 ENSOTSG00005043388 #28 WSCD1 (ENSOTSG00005043392) #30 gucy2f (ENSOTSG00005043396) serpinh1b (ENSOTSG00005043713) #37 GDPD5 (ENSOTSG00005043716) #33 Coho salmon MODERN SPECIES 9 dhrs13b.1 (ENSOKIG00005015136) dhrs13b.1 (ENSOKIG00005015123) PHF12 (ENSOKIG00005015089) SEZ6 (ENSOKIG00005015040) pipox (ENSOKIG00005015024) MYO18A (ENSOKIG00005012843) ENSOKIG00005012184 #17 KSR1 (ENSOKIG00005012052) #15 wsb1 (ENSOKIG00005011757) #14 cuedc1b (ENSOKIG00005011714) #13 vezf1b (ENSOKIG00005011654) #12 ENSOKIG00005011632 ##11 ENSOKIG00005011611 #19 ENSOKIG00005011601 NF1 (ENSOKIG00005008774) #18 akap1b (ENSOKIG00005008196) #22 ENSOKIG00005008154 msi2b (ENSOKIG00005007783) #23 ENSOKIG00005007755 mrps23 (ENSOKIG00005007739) NOS2 (ENSOKIG00005006205) #24 ENSOKIG00005006031 lyrm9 (ENSOKIG00005006016) #25 nlk2 (ENSOKIG00005005476) #26 ENSOKIG00005005438 #27 ENSOKIG00005005434 ENSOKIG00005005430 #28 WSCD1 (ENSOKIG00005005425) #30 gucy2f (ENSOKIG00005004676) serpinh1b (ENSOKIG00005004535) #37 GDPD5 (ENSOKIG00005004395) #33 Rainbow trout MODERN SPECIES 16 ENSOMYG00000040778 dhrs13b.1 (ENSOMYG00000040801) ENSOMYG00000040806 SEZ6 (ENSOMYG00000040830) ENSOMYG00000040822 pipox (ENSOMYG00000040920) ENSOMYG00000041016 ENSOMYG00000041127 #17 ENSOMYG00000041144 #15 wsb1 (ENSOMYG00000041147) #14 ENSOMYG00000065936 cuedc1b (ENSOMYG00000041151) #13 vezf1b (ENSOMYG00000041174) #12 ENSOMYG00000041246 #18 ENSOMYG00000063015 #19 akap1b (ENSOMYG00000041330) #22 msi2b (ENSOMYG00000041365) #23 ENSOMYG00000060905 mrps23 (ENSOMYG00000065363) ENSOMYG00000041648 #24 lyrm9 (ENSOMYG00000044209) #25 nlk2 (ENSOMYG00000044222) #26 ENSOMYG00000044377 ENSOMYG00000044383 #27 ENSOMYG00000044384 #28 ENSOMYG00000044389 #30 gucy2f (ENSOMYG00000044532) serpinh1b (ENSOMYG00000045788) #37 ENSOMYG00000045798 #33 ENSOMYG00000037363 hspa13 (ENSOMYG00000045812) #36 Huchen MODERN SPECIES 2000 ENSHHUG00000014751 #19 ENSHHUG00000014748 akap1b (ENSHHUG00000014654) #22 ENSHHUG00000014629 ##23 ENSHHUG00000014624 Northern pike MODERN SPECIES SEZ6 (ENSELUG00000016987) ENSELUG00000016970 pipox (ENSELUG00000016953) MYO18A (ENSELUG00000016875) ENSELUG00000016771 lgals9l3 (ENSELUG00000001327) #17 KSR1 (ENSELUG00000016597) #15 wsb1 (ENSELUG00000016546) #14 cuedc1b (ENSELUG00000016516) #13 vezf1b (ENSELUG00000016483) #12 ENSELUG00000016438 ##11 NF1 (ENSELUG00000016409) #18 ENSELUG00000034643 ENSELUG00000016319 #19 ENSELUG00000016304 #20 akap1b (ENSELUG00000001045) #22 msi2b (ENSELUG00000001361) #23 mrps23 (ENSELUG00000016203) NOS2 (ENSELUG00000016177) #24 NOS2 (ENSELUG00000001444) #24 lyrm9 (ENSELUG00000000603) #25 nlk2 (ENSELUG00000016086) #26 ENSELUG00000016053 #27 ENSELUG00000016047 #28 ENSELUG00000016040 #30 gucy2f (ENSELUG00000016021) serpinh1b (ENSELUG00000015976) #37 GDPD5 (ENSELUG00000015923) #33 hspa13 (ENSELUG00000015803) #36 samsn1a (ENSELUG00000015783) #35 ENSELUG00000015701 Acanthomorphata ANCESTRAL SPECIES 113 ENSGT00940000155599.i.a.a ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000177991 ENSGT00940000165699.A.a.b ENSGT00940000162258 #17 ENSGT00940000156066.o #15 ENSGT00890000139406.a #14 ENSGT00390000006762.c #13 ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000160802.a #19 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT00390000002625 #25 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 ENSGT00390000006030.d.a.b Euacanthomorphacea ANCESTRAL SPECIES 69 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT01060000249418 ENSGT00390000014712.a ENSGT00940000157853.a ENSGT00390000002625 #25 ENSGT00390000003413 ENSGT00950000183143.d ENSGT00940000159315 ENSGT00390000006030.d.a.b ENSGT01030000234567.B.a.a.b.b.b ENSGT00940000157944 ENSGT00940000165264.b ENSGT00940000157588 ENSGT00390000007149 Pinecone sodierfish MODERN SPECIES 4 PHF12 (ENSMMDG00005001181) ENSMMDG00005001166 SEZ6 (ENSMMDG00005024745) pipox (ENSMMDG00005024744) MYO18A (ENSMMDG00005024555) ENSMMDG00005024528 lgals9l5 (ENSMMDG00005024526) #17 KSR1 (ENSMMDG00005024523) #15 wsb1 (ENSMMDG00005024519) #14 cuedc1b (ENSMMDG00005024514) #13 vezf1b (ENSMMDG00005024513) #12 ENSMMDG00005024510 ##11 OMG (ENSMMDG00005024509) #19 ENSMMDG00005024507 NF1 (ENSMMDG00005023859) #18 akap1b (ENSMMDG00005023736) #22 msi2b (ENSMMDG00005023564) #23 mrps23 (ENSMMDG00005023548) NGEF (ENSMMDG00005023546) rint1 (ENSMMDG00005023532) SMCO4 (ENSMMDG00005023530) ENSMMDG00005023529 fat3a (ENSMMDG00005023333) GAL3ST2 (ENSMMDG00005023307) kcnj13 (ENSMMDG00005023305) efhd1 (ENSMMDG00005023303) NLRX1 (ENSMMDG00005023226) ENSMMDG00005023218 nlk2 (ENSMMDG00005023154) #26 ENSMMDG00005023142 ENSMMDG00005023137 Percomorphaceae ANCESTRAL SPECIES 56 ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000177991 ENSGT00990000203615.b.a.b ENSGT00950000182923.B.a ENSGT00940000154981.bb.a ENSGT00940000166267.a ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a Tiger tail seahorse MODERN SPECIES 517 PHLDB1 (ENSHCOG00000013573) arcn1b (ENSHCOG00000000802) hmbsa (ENSHCOG00000013386) UBASH3B (ENSHCOG00000013230) gkup (ENSHCOG00000013187) usf1l (ENSHCOG00000013132) dhrs13b.1 (ENSHCOG00000000623) PHF12 (ENSHCOG00000013115) pipox (ENSHCOG00000013104) MYO18A (ENSHCOG00000000377) ENSHCOG00000012920 ENSHCOG00000012892 lgals9l5 (ENSHCOG00000012839) #17 KSR1 (ENSHCOG00000012833) #15 wsb1 (ENSHCOG00000012780) #14 akap1b (ENSHCOG00000012771) #22 ENSHCOG00000012748 cuedc1b (ENSHCOG00000012738) #13 ENSHCOG00000012714 ENSHCOG00000012703 NF1 (ENSHCOG00000012680) #18 ENSHCOG00000012572 SMCO4 (ENSHCOG00000012563) nlk2 (ENSHCOG00000012555) #26 ENSHCOG00000000360 NLRX1 (ENSHCOG00000012522) efhd1 (ENSHCOG00000012496) kcnj13 (ENSHCOG00000012481) abcg4b (ENSHCOG00000012401) NGEF (ENSHCOG00000012372) mrps23 (ENSHCOG00000012335) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000166267.a ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155420.a.a #23 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00990000203615.b.a.b.d ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000169979 ENSGT00940000158439.m Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.d ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a ENSGT00940000155672.g Anabantaria ANCESTRAL SPECIES 9 ENSGT00390000010722 ENSGT00940000155672.g ENSGT00950000182970.A.a ENSGT00940000158882 ENSGT00940000158439.m ENSGT00390000006454 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155713 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000162258 #17 ENSGT00940000156066.o #15 ENSGT00890000139406.a #14 ENSGT00390000006762.c #13 ENSGT00390000001360.q.b #22 Zig-zag eel MODERN SPECIES 4 PPM1D (ENSMAMG00000003271) brip1 (ENSMAMG00000003282) tbx4 (ENSMAMG00000003309) tbx2b (ENSMAMG00000003347) bcas3 (ENSMAMG00000003387) ENSMAMG00000003603 DHRS13 (ENSMAMG00000025164) PHF12 (ENSMAMG00000003678) ENSMAMG00000003693 PIPOX (ENSMAMG00000003705) MYO18A (ENSMAMG00000003726) lgals9l5 (ENSMAMG00000027492) #17 ENSMAMG00000027366 #15 wsb1 (ENSMAMG00000003897) #14 cuedc1b (ENSMAMG00000003917) #13 ENSMAMG00000003966 #22 ENSMAMG00000004010 ENSMAMG00000004037 ENSMAMG00000004133 ENSMAMG00000004173 clcn2c (ENSMAMG00000004220) chrd (ENSMAMG00000004374) zgc:153039 (ENSMAMG00000004438) ENSMAMG00000004484 ENSMAMG00000004562 ENSMAMG00000004530 INPP5K (ENSMAMG00000004570) pitpnaa (ENSMAMG00000004614) SLC43A2 (ENSMAMG00000004935) myo1cb (ENSMAMG00000004998) ENSMAMG00000005055 Anabantoidei ANCESTRAL SPECIES 54 ENSGT00390000011000 ENSGT00940000155768.B ENSGT00890000139406.a #14 ENSGT00390000001360.q.b #22 Climbing perch MODERN SPECIES 4 ENSATEG00000004991 ENSATEG00000004810 ENSATEG00000004801 #13 ENSATEG00000004793 #14 ENSATEG00000004754 #22 ENSATEG00000004747 ENSATEG00000004734 ENSATEG00000004701 bcas3 (ENSATEG00000004566) tbx2b (ENSATEG00000004514) tbx4 (ENSATEG00000004473) brip1 (ENSATEG00000004382) PPM1D (ENSATEG00000004367) appbp2 (ENSATEG00000004315) USP32 (ENSATEG00000004156) ENSATEG00000004141 tmem97 (ENSATEG00000004133) ENSATEG00000004044 ENSATEG00000003997 ENSATEG00000003706 Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000025963 NLRX1 (ENSBSLG00000026001) ENSBSLG00000026035 efhd1 (ENSBSLG00000026038) kcnj13 (ENSBSLG00000026040) GAL3ST2 (ENSBSLG00000026043) ENSBSLG00000026055 fat3a (ENSBSLG00000026073) ENSBSLG00000002251 vezf1b (ENSBSLG00000002298) #12 ENSBSLG00000002370 ##11 MYO18A (ENSBSLG00000002917) ENSBSLG00000003336 pipox (ENSBSLG00000003631) wsb1 (ENSBSLG00000003720) #14 akap1b (ENSBSLG00000003812) #22 ENSBSLG00000003942 mrps23 (ENSBSLG00000004208) cuedc1b (ENSBSLG00000004228) #13 PHF12 (ENSBSLG00000004855) dhrs13a.3 (ENSBSLG00000005230) ENSBSLG00000005273 ENSBSLG00000005311 lhx1a (ENSBSLG00000005319) ENSBSLG00000005357 bcas3 (ENSBSLG00000005469) ENSBSLG00000005924 ENSBSLG00000005926 tbx2b (ENSBSLG00000005930) tbx4 (ENSBSLG00000005948) brip1 (ENSBSLG00000006529) Carangaria ANCESTRAL SPECIES 8 ENSGT00940000168466 ENSGT00940000167856.b ENSGT00940000153306.A.b ENSGT00940000159642.f.a ENSGT00940000155801 ENSGT00950000182856.b.c ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00390000001053 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00390000014712.a.g ENSGT00940000157853.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a ENSGT00940000155672.g Pleuronectoidei ANCESTRAL SPECIES 51 ENSGT00940000168466 ENSGT00940000167856.b ENSGT00940000153306.A.b ENSGT00940000159642.f.a ENSGT00940000155801 ENSGT00950000182856.b.c ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00390000001053 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00390000014712.a.g ENSGT00940000157853.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a ENSGT00940000155672.g Turbot MODERN SPECIES 15 ENSSMAG00000029345 ENSSMAG00000016228 ZBTB44 (ENSSMAG00000016209) ENSSMAG00000016200 ENSSMAG00000016185 SNX19 (ENSSMAG00000016148) ENSSMAG00000016135 TIMM8B (ENSSMAG00000016125) sdhdb (ENSSMAG00000016104) ENSSMAG00000016100 bco2b (ENSSMAG00000016088) ENSSMAG00000016067 ENSSMAG00000015999 ENSSMAG00000015984 ENSSMAG00000015946 ENSSMAG00000015934 #22 ENSSMAG00000015896 #13 wsb1 (ENSSMAG00000015887) #14 ENSSMAG00000015801 #15 lgals9l5 (ENSSMAG00000015775) #17 ENSSMAG00000015453 pipox (ENSSMAG00000015424) SEZ6 (ENSSMAG00000015409) ENSSMAG00000015392 DHRS13 (ENSSMAG00000015340) ENSSMAG00000015312 bcas3 (ENSSMAG00000015106) tbx2b (ENSSMAG00000015067) tbx4 (ENSSMAG00000015054) brip1 (ENSSMAG00000014966) PPM1D (ENSSMAG00000014956) Tongue sole MODERN SPECIES 14 ENSCSEG00000004964 zbtb44 (ENSCSEG00000004960) ADAMTS8 (ENSCSEG00000004956) adamts15a (ENSCSEG00000004951) SNX19 (ENSCSEG00000004947) ENSCSEG00000004944 timm8b (ENSCSEG00000004938) sdhdb (ENSCSEG00000004936) ENSCSEG00000004929 bco2b (ENSCSEG00000004919) ENSCSEG00000004912 SORL1 (ENSCSEG00000004797) ENSCSEG00000004769 ENSCSEG00000004766 abcg4b (ENSCSEG00000004744) akap1b (ENSCSEG00000004730) #22 cuedc1b (ENSCSEG00000004717) #13 wsb1 (ENSCSEG00000004713) #14 tbx4 (ENSCSEG00000004704) brip1 (ENSCSEG00000004678) ppm1da (ENSCSEG00000004673) appbp2 (ENSCSEG00000004670) ENSCSEG00000004660 USP6 (ENSCSEG00000004651) ENSCSEG00000004642 lgals9l5 (ENSCSEG00000004637) #17 ENSCSEG00000004635 KSR1 (ENSCSEG00000004630) #15 tbx2b (ENSCSEG00000004625) bcas3 (ENSCSEG00000004554) lhx1a (ENSCSEG00000004540) Carangaria_A ANCESTRAL SPECIES 47 ENSGT00940000168466 ENSGT00940000167856.b ENSGT00940000153306.A.b ENSGT00940000159642.f.a ENSGT00940000155801 ENSGT00950000182856.b.c ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00390000001053 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT00390000014712.a.g ENSGT00940000157853.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a ENSGT00940000155672.g Seriola ANCESTRAL SPECIES 82 ENSGT00940000167856.b ENSGT00940000153306.A.b ENSGT00940000159642.f.a ENSGT00940000155801 ENSGT00950000182856.b.c ENSGT00940000160928.n.a ENSGT00940000155479 ENSGT00390000010003 ENSGT00940000171313 ENSGT00950000182913.A.a.b.a ENSGT00940000174828 ENSGT01030000234563.a.b ENSGT01090000259997.a.d.b.a.b.a.b.b.a.a.b ENSGT00390000014712.a.g ENSGT00940000157853.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a ENSGT00940000155672.g Yellowtail amberjack MODERN SPECIES 3169 ENSSLDG00000001231 zbtb44 (ENSSLDG00000001248) ADAMTS8 (ENSSLDG00000001284) ENSSLDG00000001299 SNX19 (ENSSLDG00000001340) ENSSLDG00000001365 timm8b (ENSSLDG00000001387) sdhdb (ENSSLDG00000001402) ENSSLDG00000001409 bco2b (ENSSLDG00000001423) ENSSLDG00000001497 SORL1 (ENSSLDG00000001532) ENSSLDG00000001743 ENSSLDG00000001773 abcg4b (ENSSLDG00000001795) akap1b (ENSSLDG00000001859) #22 cuedc1b (ENSSLDG00000001897) #13 wsb1 (ENSSLDG00000001929) #14 ENSSLDG00000001946 #15 ENSSLDG00000002001 #15 lgals9l5 (ENSSLDG00000002021) #17 MYO18A (ENSSLDG00000002072) pipox (ENSSLDG00000002192) SEZ6 (ENSSLDG00000002212) PHF12 (ENSSLDG00000002237) ENSSLDG00000002322 DHRS13 (ENSSLDG00000002402) Greater amberjack MODERN SPECIES 143 SNX19 (ENSSDUG00000018950) ENSSDUG00000018977 timm8b (ENSSDUG00000019059) sdhdb (ENSSDUG00000019077) ENSSDUG00000019118 bco2b (ENSSDUG00000019130) ENSSDUG00000019161 SORL1 (ENSSDUG00000019175) ENSSDUG00000019308 ENSSDUG00000019315 ENSSDUG00000019326 ENSSDUG00000019336 abcg4b (ENSSDUG00000019352) akap1b (ENSSDUG00000019393) #22 cuedc1b (ENSSDUG00000019430) #13 wsb1 (ENSSDUG00000019463) #14 KSR1 (ENSSDUG00000019496) #15 lgals9l5 (ENSSDUG00000019565) #17 MYO18A (ENSSDUG00000019580) pipox (ENSSDUG00000019644) SEZ6 (ENSSDUG00000019660) PHF12 (ENSSDUG00000019708) Barramundi perch MODERN SPECIES 27 ENSLCAG00010002904 ENSLCAG00010002905 #19 SMCO4 (ENSLCAG00010002906) nlk2 (ENSLCAG00010002914) #26 ENSLCAG00010002970 NLRX1 (ENSLCAG00010002980) efhd1 (ENSLCAG00010002989) timm8b (ENSLCAG00010003017) sdhdb (ENSLCAG00010003020) ENSLCAG00010003021 BCO2 (ENSLCAG00010003039) ENSLCAG00010003128 SORL1 (ENSLCAG00010003241) ENSLCAG00010003645 abcg4b (ENSLCAG00010003652) akap1b (ENSLCAG00010003666) #22 cuedc1b (ENSLCAG00010003681) #13 wsb1 (ENSLCAG00010003686) #14 KSR1 (ENSLCAG00010003691) #15 ENSLCAG00010003693 MYO18A (ENSLCAG00010003783) ENSLCAG00010004144 pipox (ENSLCAG00010004146) ENSLCAG00010004151 SEZ6 (ENSLCAG00010004159) PHF12 (ENSLCAG00010004197) DHRS13 (ENSLCAG00010004239) lhx1a (ENSLCAG00010004247) bcas3 (ENSLCAG00010004270) tbx2b (ENSLCAG00010004416) tbx4 (ENSLCAG00010004422) Eupercaria ANCESTRAL SPECIES 7 ENSGT00390000009030 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a ENSGT00940000154981.bb.a ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000153269.a.a ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Tetraodon MODERN SPECIES 8 ENSTNIG00000003191 #10 ENSTNIG00000000475 smco4 (ENSTNIG00000000289) NF1 (ENSTNIG00000004988) #18 akap1b (ENSTNIG00000004987) #22 cuedc1b (ENSTNIG00000004986) #13 wsb1 (ENSTNIG00000004985) #14 KSR1 (ENSTNIG00000004984) #15 lgals9l5 (ENSTNIG00000004983) #17 MYO18A (ENSTNIG00000004982) pipox (ENSTNIG00000004981) SEZ6 (ENSTNIG00000003508) PHF12 (ENSTNIG00000003509) dhrs13b.1 (ENSTNIG00000003510) dhrs13a.3 (ENSTNIG00000003511) dcst2 (ENSTNIG00000001633) lhx1a (ENSTNIG00000014399) ENSTNIG00000014398 bcas3 (ENSTNIG00000014397) bcas3 (ENSTNIG00000014396) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00390000009030 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a ENSGT00940000154981.bb.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.d ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000154981.bb.a ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.d ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j.d ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000161258.b ENSGT00950000182934.a.b.h.b.d.d ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j.d ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 European seabass MODERN SPECIES 3 ENSDLAG00005032160 ENSDLAG00005000658 #26 ENSDLAG00005000694 #18 ENSDLAG00005029218 ENSDLAG00005026594 #19 ENSDLAG00005000844 ENSDLAG00005033375 ##11 ENSDLAG00005000851 #12 msi2b (ENSDLAG00005032073) #23 ENSDLAG00005019260 ENSDLAG00005000861 ENSDLAG00005000874 ENSDLAG00005034569 ENSDLAG00005002682 ENSDLAG00005002816 ENSDLAG00005000945 #22 cuedc1b (ENSDLAG00005000970) #13 wsb1 (ENSDLAG00005000994) #14 ENSDLAG00005001076 #15 lgals9l5 (ENSDLAG00005001138) #17 ENSDLAG00005032779 ENSDLAG00005001419 pipox (ENSDLAG00005006389) SEZ6 (ENSDLAG00005006590) ENSDLAG00005006957 PHF12 (ENSDLAG00005006969) dhrs13b.1 (ENSDLAG00005007644) DHRS13 (ENSDLAG00005007652) ENSDLAG00005027911 ENSDLAG00005032863 bcas3 (ENSDLAG00005007690) Large yellow croaker MODERN SPECIES 98 akap1b (ENSLCRG00005020013) #22 ENSLCRG00005020017 Gilthead seabream MODERN SPECIES 11 tbx2b (ENSSAUG00010011285) bcas3 (ENSSAUG00010011304) lhx1a (ENSSAUG00010011432) ENSSAUG00010011433 ENSSAUG00010011435 ENSSAUG00010011436 dhrs13a.3 (ENSSAUG00010011437) kcnj13 (ENSSAUG00010011441) efhd1 (ENSSAUG00010011443) NLRX1 (ENSSAUG00010011446) nlk2 (ENSSAUG00010011645) #26 SMCO4 (ENSSAUG00010011933) NF1 (ENSSAUG00010011957) #18 ENSSAUG00010011982 #19 ENSSAUG00010011983 akap1b (ENSSAUG00010011987) #22 cuedc1b (ENSSAUG00010012037) #13 wsb1 (ENSSAUG00010012049) #14 ENSSAUG00010012074 KSR1 (ENSSAUG00010012076) #15 lgals9l5 (ENSSAUG00010012079) #17 ENSSAUG00010012080 MYO18A (ENSSAUG00010012156) pipox (ENSSAUG00010018297) SEZ6 (ENSSAUG00010018305) ENSSAUG00010018309 PHF12 (ENSSAUG00010018311) ENSSAUG00010018315 dhrs13b.1 (ENSSAUG00010018316) ENSSAUG00010018321 ENSSAUG00010000143 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000165264.b ENSGT00940000157588 ENSGT00390000007149 ENSGT00940000166715 ENSGT00940000155797 ENSGT00940000172043 ENSGT00390000010722 ENSGT00940000155672.g ENSGT00950000182970.A.a ENSGT00940000158882 ENSGT00940000158439.m ENSGT00390000006454 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000161258.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000157944 ENSGT00940000165264.b ENSGT00940000157588 ENSGT00390000007149 ENSGT00940000155797 ENSGT00940000172043 ENSGT00390000010722 ENSGT00940000155672.g ENSGT00950000182970.A.a ENSGT00940000158882 ENSGT00940000158439.m ENSGT00390000006454 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000161258.b Lumpfish MODERN SPECIES 17 ULK2 (ENSCLMG00005009497) tmem97 (ENSCLMG00005009508) USP6 (ENSCLMG00005009550) ENSCLMG00005011930 appbp2 (ENSCLMG00005011931) ppm1da (ENSCLMG00005011932) brip1 (ENSCLMG00005011933) tbx4 (ENSCLMG00005011934) ENSCLMG00005011935 tbx2b (ENSCLMG00005011936) bcas3 (ENSCLMG00005011937) ENSCLMG00005011944 lhx1a (ENSCLMG00005011945) DHRS13 (ENSCLMG00005011946) dhrs13b.1 (ENSCLMG00005011947) akap1b (ENSCLMG00005011948) #22 ENSCLMG00005012051 cuedc1b (ENSCLMG00005012053) #13 wsb1 (ENSCLMG00005012058) #14 KSR1 (ENSCLMG00005012092) #15 lgals9l5 (ENSCLMG00005012098) #17 MYO18A (ENSCLMG00005012132) pipox (ENSCLMG00005018214) SEZ6 (ENSCLMG00005018218) PHF12 (ENSCLMG00005018221) taar13b (ENSCLMG00005018223) TAAR1 (ENSCLMG00005018224) GAL3ST2 (ENSCLMG00005018225) kcnj13 (ENSCLMG00005018226) fat3a (ENSCLMG00005018233) vezf1b (ENSCLMG00005018449) #12 Stickleback MODERN SPECIES ULK2 (ENSGACG00000013524) tmem97 (ENSGACG00000013539) USP6 (ENSGACG00000013540) appbp2 (ENSGACG00000013551) ppm1da (ENSGACG00000013556) brip1 (ENSGACG00000013558) tbx4 (ENSGACG00000013565) tbx2b (ENSGACG00000013575) bcas3 (ENSGACG00000013586) ENSGACG00000013604 lhx1a (ENSGACG00000013605) ENSGACG00000013610 ENSGACG00000013612 dhrs13a.3 (ENSGACG00000013614) dhrs13b.1 (ENSGACG00000013619) akap1b (ENSGACG00000013633) #22 cuedc1b (ENSGACG00000013641) #13 wsb1 (ENSGACG00000013651) #14 KSR1 (ENSGACG00000013663) #15 lgals9l5 (ENSGACG00000013667) #17 MYO18A (ENSGACG00000013682) pipox (ENSGACG00000013689) ENSGACG00000013700 ENSGACG00000013701 PHF12 (ENSGACG00000013703) pou3f3b (ENSGACG00000013707) ENSGACG00000013709 ENSGACG00000013710 ENSGACG00000013712 ENSGACG00000013725 MTRF1 (ENSGACG00000013728) Perciformes_a ANCESTRAL SPECIES 54 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000161258.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155420.a.a #23 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000166267.a Pike perch MODERN SPECIES 70 bckdha (ENSSLUG00000016257) ENSSLUG00000016281 napab (ENSSLUG00000016307) EHD2 (ENSSLUG00000016378) nup88 (ENSSLUG00000016385) psmd8 (ENSSLUG00000016390) BET1L (ENSSLUG00000016407) exosc5 (ENSSLUG00000016413) ppp1r13l (ENSSLUG00000016420) lhx1a (ENSSLUG00000016427) dhrs13a.3 (ENSSLUG00000016447) ENSSLUG00000016453 ENSSLUG00000016465 ENSSLUG00000016469 ENSSLUG00000016482 akap1b (ENSSLUG00000016497) #22 cuedc1b (ENSSLUG00000016510) #13 ENSSLUG00000016516 wsb1 (ENSSLUG00000016530) #14 KSR1 (ENSSLUG00000016552) #15 lgals9l5 (ENSSLUG00000016567) #17 MYO18A (ENSSLUG00000016839) pipox (ENSSLUG00000021355) ENSSLUG00000021362 ENSSLUG00000021368 Ballan wrasse MODERN SPECIES 93 ENSLBEG00000016500 ENSLBEG00000016528 akap1b (ENSLBEG00000016545) #22 cuedc1b (ENSLBEG00000016589) #13 wsb1 (ENSLBEG00000016604) #14 KSR1 (ENSLBEG00000016630) #15 lgals9l5 (ENSLBEG00000016681) #17 inpp5ka (ENSLBEG00000016790) xaf1 (ENSLBEG00000016845) ECEL1 (ENSLBEG00000016884) zgc:153039 (ENSLBEG00000016949) ENSLBEG00000017000 chrd (ENSLBEG00000017124) ENSLBEG00000017342 ENSLBEG00000017376 ENSLBEG00000017400 fam131ab (ENSLBEG00000017425) alp3 (ENSLBEG00000017458) Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000154981.bb.a ENSGT00940000155932.b.a #12 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00990000203615.b.a.b.d ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000177991 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 Atherinomorphae ANCESTRAL SPECIES 76 ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00940000155932.b.a #12 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a Cyprinodontiformes ANCESTRAL SPECIES 32 ENSGT00940000169979 ENSGT00390000006454 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a.c ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00940000177991 ENSGT00890000139406.a #14 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00390000009030 ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 Cyprinodontoidei ANCESTRAL SPECIES 114 ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 Poeciliinae ANCESTRAL SPECIES 39 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a.c ENSGT00940000155713 ENSGT00390000011000 ENSGT00940000155768.B.u ENSGT00940000177991 ENSGT00890000139406.a #14 ENSGT00940000154981.bb.a ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00940000160802.a #19 ENSGT00550000074797.a.a #18 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000166660 ENSGT00940000155231.a.a ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000156097.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00940000162996.y.a.a.c.a.b Poecilia ANCESTRAL SPECIES 56 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a.a.c ENSGT00940000155713 ENSGT00390000011000 ENSGT00940000155768.B.u ENSGT00940000177991 ENSGT00890000139406.a #14 ENSGT00940000154981.bb.a ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00940000160802.a #19 ENSGT00550000074797.a.a #18 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000166660 ENSGT00940000155231.a.a ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000156097.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00940000162996.y.a.a.c.a.b NAME_6 ANCESTRAL SPECIES 248 ENSGT00940000155599.j ENSGT00940000155599.i.a.a.c ENSGT00940000155713 ENSGT00390000011000 ENSGT00940000155768.B.u ENSGT00890000139406.a #14 ENSGT00940000154981.bb.a.l ENSGT00940000154981.bb.a.k ENSGT00990000203615.b.a.b.c.a ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00940000160802.a #19 ENSGT00550000074797.a.a #18 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000166660 ENSGT00940000155231.a.a Amazon molly MODERN SPECIES 578 dhrs13a.3 (ENSPFOG00000007346) dhrs13b.1 (ENSPFOG00000007291) PHF12 (ENSPFOG00000007125) pipox (ENSPFOG00000007055) MYO18A (ENSPFOG00000007000) wsb1 (ENSPFOG00000006911) #14 fat3a (ENSPFOG00000006119) kcnj13 (ENSPFOG00000006054) efhd1 (ENSPFOG00000006018) NLRX1 (ENSPFOG00000005890) ENSPFOG00000005828 nlk2 (ENSPFOG00000005722) #26 SMCO4 (ENSPFOG00000019988) akap1b (ENSPFOG00000005623) #22 cuedc1b (ENSPFOG00000005542) #13 OMG (ENSPFOG00000005533) #19 NF1 (ENSPFOG00000004914) #18 zgc:113279 (ENSPFOG00000004876) ENSPFOG00000004847 ENSPFOG00000004163 PHLDB1 (ENSPFOG00000003890) Sailfin molly MODERN SPECIES 1465 ENSPLAG00000005363 nlk2 (ENSPLAG00000005400) #26 SMCO4 (ENSPLAG00000005414) akap1b (ENSPLAG00000005425) #22 cuedc1b (ENSPLAG00000005454) #13 OMG (ENSPLAG00000000104) #19 NF1 (ENSPLAG00000000107) #18 ENSPLAG00000005623 ENSPLAG00000005650 Guppy MODERN SPECIES 443 dhrs13b.1 (ENSPREG00000014926) PHF12 (ENSPREG00000014889) pipox (ENSPREG00000014844) MYO18A (ENSPREG00000014801) ENSPREG00000014790 wsb1 (ENSPREG00000014766) #14 ENSPREG00000014747 ENSPREG00000014680 kcnj13 (ENSPREG00000014635) efhd1 (ENSPREG00000014617) NLRX1 (ENSPREG00000014591) ENSPREG00000014570 nlk2 (ENSPREG00000014548) #26 SMCO4 (ENSPREG00000014541) SMCO4 (ENSPREG00000014535) akap1b (ENSPREG00000014531) #22 cuedc1b (ENSPREG00000014516) #13 ENSPREG00000014503 #19 NF1 (ENSPREG00000014418) #18 ENSPREG00000014392 ENSPREG00000014371 PHLDB1 (ENSPREG00000014338) arcn1b (ENSPREG00000014276) hmbsa (ENSPREG00000014179) ubash3bb (ENSPREG00000014141) gkup (ENSPREG00000014076) usf1l (ENSPREG00000014045) ENSPREG00000013977 ENSPREG00000013964 olfch1 (ENSPREG00000013566) olfch1 (ENSPREG00000013370) Platyfish MODERN SPECIES 9 lhx1a (ENSXMAG00000005342) ENSXMAG00000025770 dhrs13a.3 (ENSXMAG00000006450) dhrs13b.1 (ENSXMAG00000021645) PHF12 (ENSXMAG00000012001) pipox (ENSXMAG00000012037) MYO18A (ENSXMAG00000012050) wsb1 (ENSXMAG00000026740) #14 fat3a (ENSXMAG00000012113) kcnj13 (ENSXMAG00000012145) efhd1 (ENSXMAG00000012154) NLRX1 (ENSXMAG00000008366) ENSXMAG00000012161 nlk2 (ENSXMAG00000012171) #26 SMCO4 (ENSXMAG00000019695) akap1b (ENSXMAG00000012222) #22 cuedc1b (ENSXMAG00000012229) #13 OMG (ENSXMAG00000029866) #19 NF1 (ENSXMAG00000012244) #18 zgc:113279 (ENSXMAG00000025147) ENSXMAG00000012355 ENSXMAG00000018025 PHLDB1 (ENSXMAG00000018015) arcn1b (ENSXMAG00000012365) hmbsa (ENSXMAG00000023756) ubash3bb (ENSXMAG00000012415) gkup (ENSXMAG00000008512) usf1l (ENSXMAG00000005137) ENSXMAG00000012424 stim1a (ENSXMAG00000023877) ENSXMAG00000012541 NAME_4 ANCESTRAL SPECIES 572 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 Mummichog MODERN SPECIES 749 akap1b (ENSFHEG00000020302) #22 ENSFHEG00000020212 efhd1 (ENSFHEG00000020205) ENSFHEG00000020181 Sheepshead minnow MODERN SPECIES 1198 akap1b (ENSCVAG00000007856) #22 cuedc1b (ENSCVAG00000007748) #13 NF1 (ENSCVAG00000007717) #18 OMG (ENSCVAG00000007596) #19 Aplocheiloidei ANCESTRAL SPECIES 201 ENSGT00940000155713 ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT00890000139406.a #14 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00390000009030 Mangrove rivulus MODERN SPECIES 169 PHF12 (ENSKMAG00000015048) ENSKMAG00000014914 SEZ6 (ENSKMAG00000014845) pipox (ENSKMAG00000014822) MYO18A (ENSKMAG00000014471) wsb1 (ENSKMAG00000014271) #14 fat3a (ENSKMAG00000013942) NGEF (ENSKMAG00000013804) SMCO4 (ENSKMAG00000013790) OMG (ENSKMAG00000013777) #19 ENSKMAG00000013764 NF1 (ENSKMAG00000013646) #18 akap1b (ENSKMAG00000013600) #22 cuedc1b (ENSKMAG00000013575) #13 Oryzias ANCESTRAL SPECIES 8 ENSGT00390000007149 ENSGT00940000157588 ENSGT00940000157944 ENSGT00390000006030.d.a.b ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a #12 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a.f #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00940000159493 ENSGT00390000012058.c.a ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a ENSGT00390000017207.i.a ENSGT00390000009083.n Oryzias_b ANCESTRAL SPECIES 68 ENSGT00390000007149 ENSGT00940000157588 ENSGT00940000157944 ENSGT00390000006030.d.a.b ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a #12 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a.f #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00940000159493 ENSGT00390000012058.c.a ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a Javanese ricefish MODERN SPECIES 4 tmem97 (ENSOJAG00000002198) ULK2 (ENSOJAG00000002156) ENSOJAG00000002109 tpst1 (ENSOJAG00000002087) ENSOJAG00000002065 ENSOJAG00000002036 ENSOJAG00000002023 vezf1b (ENSOJAG00000001973) #12 mrps23 (ENSOJAG00000001959) NGEF (ENSOJAG00000001844) ENSOJAG00000001812 nlk2 (ENSOJAG00000001725) #26 SMCO4 (ENSOJAG00000020664) OMG (ENSOJAG00000020658) #19 ENSOJAG00000020649 akap1b (ENSOJAG00000018582) #22 cuedc1b (ENSOJAG00000018570) #13 NLRX1 (ENSOJAG00000018553) efhd1 (ENSOJAG00000018548) SNX19 (ENSOJAG00000018537) ENSOJAG00000018515 ADAMTS8 (ENSOJAG00000018431) zbtb44 (ENSOJAG00000018405) ENSOJAG00000018397 ENSOJAG00000018390 ENSOJAG00000018348 ENSOJAG00000018290 ENSOJAG00000018272 ptprna (ENSOJAG00000018026) desma (ENSOJAG00000017951) TMEM198 (ENSOJAG00000017934) Indian medaka MODERN SPECIES 27 ENSOMEG00000017540 ENSOMEG00000017459 ENSOMEG00000017366 PRKCE (ENSOMEG00000017287) epas1b (ENSOMEG00000017236) lhb (ENSOMEG00000017138) ENSOMEG00000017118 ENSOMEG00000017100 ARFGEF3 (ENSOMEG00000016473) HTR7 (ENSOMEG00000014316) ENSOMEG00000014262 ANKRD1 (ENSOMEG00000014118) pcgf5a (ENSOMEG00000014083) HECTD2 (ENSOMEG00000014030) ppp1r3ca (ENSOMEG00000013931) akap1b (ENSOMEG00000013912) #22 NLRX1 (ENSOMEG00000013878) cuedc1b (ENSOMEG00000013817) #13 ENSOMEG00000013787 ENSOMEG00000013760 slc8a1b (ENSOMEG00000013705) mrps5 (ENSOMEG00000013610) malb (ENSOMEG00000000767) ENSOMEG00000013521 ENSOMEG00000013512 nphp1 (ENSOMEG00000013481) zgc:65997 (ENSOMEG00000013417) pank1a (ENSOMEG00000013382) SLC16A12 (ENSOMEG00000013287) ANAPC1 (ENSOMEG00000013202) vip (ENSOMEG00000013108) Oryzias_a ANCESTRAL SPECIES 51 ENSGT00390000007149 ENSGT00940000157588 ENSGT00940000157944 ENSGT00390000006030.d.a.b ENSGT00390000003348 ENSGT01100000263489.a.a.b.a.a.a.f.a.c.b ENSGT00940000155932.b.a #12 ENSGT00390000009030 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT00390000015987 ENSGT00550000074797.a.a.f #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00390000012058.c.a ENSGT00950000182856.b.c ENSGT00940000155801 ENSGT00940000159642.f.a ENSGT00940000153306.A.b ENSGT00940000167856.b.a ENSGT01050000245833 ENSGT00940000167856.b.b ENSGT00940000168466 ENSGT00940000153695.A ENSGT00530000063801.b.g ENSGT00940000155231.a.a ENSGT00390000017207.i.a Japanese Medaka HdrR MODERN SPECIES 4 ENSORLG00000015051 ENSORLG00000025200 ENSORLG00000029860 ENSORLG00000023070 ENSORLG00000015060 #12 mrps23 (ENSORLG00000023980) ENSORLG00000015069 ENSORLG00000015075 nlk2 (ENSORLG00000015084) #26 SMCO4 (ENSORLG00000026161) ENSORLG00000023025 #18 ENSORLG00000024394 OMG (ENSORLG00000022700) #19 ENSORLG00000026470 ENSORLG00000015104 #18 ENSORLG00000015123 #22 ENSORLG00000029499 cuedc1b (ENSORLG00000015129) #13 efhd1 (ENSORLG00000015162) ENSORLG00000026273 SNX19 (ENSORLG00000015174) ENSORLG00000015202 ADAMTS8 (ENSORLG00000015206) zbtb44 (ENSORLG00000015218) ENSORLG00000029002 ENSORLG00000025830 ENSORLG00000030540 zgc:113279 (ENSORLG00000026552) ENSORLG00000028864 ENSORLG00000030188 PHLDB1 (ENSORLG00000015270) Chinese medaka MODERN SPECIES 1269 USP32 (ENSOSIG00000006630) ENSOSIG00000006617 tmem97 (ENSOSIG00000006615) ENSOSIG00000006613 ENSOSIG00000006611 tpst1 (ENSOSIG00000006609) ENSOSIG00000006606 ENSOSIG00000006604 ENSOSIG00000006565 vezf1b (ENSOSIG00000006558) #12 mrps23 (ENSOSIG00000006555) nlk2 (ENSOSIG00000006252) #26 ENSOSIG00000006067 #18 OMG (ENSOSIG00000006064) #19 ENSOSIG00000006063 akap1b (ENSOSIG00000006055) #22 cuedc1b (ENSOSIG00000006049) #13 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m Pomacentridae ANCESTRAL SPECIES 5 ENSGT00390000012058.c.a ENSGT00990000203615.b.a.b.d ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00940000158363 #26 ENSGT00950000182849.A.f.a.a ENSGT00940000159493 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00390000012058.c.a ENSGT00990000203615.b.a.b.d ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT00940000155932.b.a #12 ENSGT00940000158363 #26 ENSGT00950000182849.A.f.a.a ENSGT00940000159493 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000179463 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 ENSGT00950000182970.A.a Amphiprion ANCESTRAL SPECIES 283 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000165699.A.a.b ENSGT00940000179463 Orange clownfish MODERN SPECIES 23 ENSAPEG00000008071 ENSAPEG00000008031 efhd1 (ENSAPEG00000008019) kcnj13 (ENSAPEG00000008008) NGEF (ENSAPEG00000007936) mrps23 (ENSAPEG00000007913) vezf1b (ENSAPEG00000007873) #12 nlk2 (ENSAPEG00000007834) #26 ENSAPEG00000007783 NLRX1 (ENSAPEG00000007597) ENSAPEG00000007563 SMCO4 (ENSAPEG00000007556) ENSAPEG00000007519 ENSAPEG00000007500 #19 NF1 (ENSAPEG00000007283) #18 akap1b (ENSAPEG00000007202) #22 ENSAPEG00000007178 cuedc1b (ENSAPEG00000007146) #13 wsb1 (ENSAPEG00000007095) #14 ENSAPEG00000007074 #15 lgals9l5 (ENSAPEG00000007060) #17 ENSAPEG00000007045 ENSAPEG00000007035 MYO18A (ENSAPEG00000006855) ENSAPEG00000006742 ENSAPEG00000006721 pipox (ENSAPEG00000006707) ENSAPEG00000006680 ENSAPEG00000006674 SEZ6 (ENSAPEG00000006514) PHF12 (ENSAPEG00000006475) Clown anemonefish MODERN SPECIES 1646 SLC4A5 (ENSAOCG00000014987) ogfod2 (ENSAOCG00000014944) NF1 (ENSAOCG00000014912) #18 ENSAOCG00000014798 #19 akap1b (ENSAOCG00000014786) #22 cuedc1b (ENSAOCG00000000994) #13 wsb1 (ENSAOCG00000014747) #14 KSR1 (ENSAOCG00000014723) #15 lgals9l5 (ENSAOCG00000014700) #17 ENSAOCG00000014675 ENSAOCG00000014666 Spiny chromis MODERN SPECIES 1029 ENSAPOG00000015796 #19 ENSAPOG00000015773 ENSAPOG00000015766 #18 akap1b (ENSAPOG00000015611) #22 cuedc1b (ENSAPOG00000015603) #13 wsb1 (ENSAPOG00000015547) #14 Bicolor damselfish MODERN SPECIES 306 gadd45gb.1 (ENSSPAG00000005735) GADD45G (ENSSPAG00000005713) EFNA5 (ENSSPAG00000005701) ENSSPAG00000005690 pip5k1ba (ENSSPAG00000005620) tjp2a (ENSSPAG00000005473) ENSSPAG00000005384 ENSSPAG00000005366 slc30a5 (ENSSPAG00000005326) SMCO4 (ENSSPAG00000005317) ENSSPAG00000005296 #19 ENSSPAG00000005284 NF1 (ENSSPAG00000005173) #18 akap1b (ENSSPAG00000005133) #22 cuedc1b (ENSSPAG00000005087) #13 wsb1 (ENSSPAG00000005079) #14 ENSSPAG00000005069 #15 lgals9l5 (ENSSPAG00000005057) #17 ENSSPAG00000005054 MYO18A (ENSSPAG00000004969) Cichlidae ANCESTRAL SPECIES 41 ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Midas cichlid MODERN SPECIES 1080 ENSACIG00000011044 tpst1 (ENSACIG00000011108) SGSM2 (ENSACIG00000011127) NF1 (ENSACIG00000011178) #18 ENSACIG00000011278 #19 ENSACIG00000011288 akap1b (ENSACIG00000011298) #22 cuedc1b (ENSACIG00000011321) #13 wsb1 (ENSACIG00000011344) #14 KSR1 (ENSACIG00000011435) #15 ENSACIG00000011471 #15 lgals9l5 (ENSACIG00000011476) #17 MYO18A (ENSACIG00000011505) pipox (ENSACIG00000011605) SEZ6 (ENSACIG00000011628) Pseudocrenilabrinae ANCESTRAL SPECIES 33 ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Nile tilapia MODERN SPECIES 5 SLC43A2 (ENSONIG00000010841) myo1cb (ENSONIG00000010849) ENSONIG00000010863 crk (ENSONIG00000010865) LRRC75A (ENSONIG00000010868) poldip2 (ENSONIG00000010869) tmem199 (ENSONIG00000038413) ENSONIG00000010879 smtnl (ENSONIG00000010883) ENSONIG00000029637 ENSONIG00000010888 OMG (ENSONIG00000038614) #19 ENSONIG00000036061 ENSONIG00000034139 NF1 (ENSONIG00000014832) #18 akap1b (ENSONIG00000014829) #22 cuedc1b (ENSONIG00000014823) #13 nlk2 (ENSONIG00000006428) #26 ENSONIG00000039275 NGEF (ENSONIG00000006422) mrps23 (ENSONIG00000006417) ENSONIG00000006416 ##11 ENSONIG00000030928 vezf1b (ENSONIG00000006414) #12 ENSONIG00000034934 fat3a (ENSONIG00000006677) ENSONIG00000028613 GAL3ST2 (ENSONIG00000006688) kir7.1 (ENSONIG00000006690) efhd1 (ENSONIG00000006692) NLRX1 (ENSONIG00000015761) Pseudocrenilabrinae_A ANCESTRAL SPECIES 42 ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Lyretail cichlid MODERN SPECIES 352 efhd1 (ENSNBRG00000005896) ENSNBRG00000005912 ENSNBRG00000005940 ENSNBRG00000005958 nlk2 (ENSNBRG00000006031) #26 ENSNBRG00000006078 NGEF (ENSNBRG00000006097) mrps23 (ENSNBRG00000006143) ENSNBRG00000006162 ##11 vezf1b (ENSNBRG00000006195) #12 SMCO4 (ENSNBRG00000006212) NF1 (ENSNBRG00000006229) #18 ENSNBRG00000006396 #19 ENSNBRG00000006415 ENSNBRG00000006428 #21 akap1b (ENSNBRG00000006439) #22 cuedc1b (ENSNBRG00000006459) #13 wsb1 (ENSNBRG00000006476) #14 ENSNBRG00000006520 #15 ENSNBRG00000006559 #15 lgals9l5 (ENSNBRG00000006576) #17 MYO18A (ENSNBRG00000006624) pipox (ENSNBRG00000006744) SEZ6 (ENSNBRG00000006837) PHF12 (ENSNBRG00000006957) dhrs13b.1 (ENSNBRG00000007069) dhrs13a.3 (ENSNBRG00000007095) lhx1a (ENSNBRG00000007241) bcas3 (ENSNBRG00000007264) tbx2b (ENSNBRG00000007324) tbx4 (ENSNBRG00000007344) Haplochromini ANCESTRAL SPECIES 48 ENSGT00940000154981.bb.a.h ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a.f ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00940000176216 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 Burton s mouthbrooder MODERN SPECIES 488 NLRX1 (ENSHBUG00000003296) ENSHBUG00000003273 nlk2 (ENSHBUG00000003263) #26 ENSHBUG00000003241 mrps23 (ENSHBUG00000003221) ENSHBUG00000003202 ##11 vezf1b (ENSHBUG00000003193) #12 SMCO4 (ENSHBUG00000003150) NF1 (ENSHBUG00000003128) #18 ENSHBUG00000003041 ENSHBUG00000003025 #19 ENSHBUG00000003014 ENSHBUG00000003009 #21 ENSHBUG00000003002 #22 ENSHBUG00000002991 cuedc1b (ENSHBUG00000002979) #13 wsb1 (ENSHBUG00000002948) #14 KSR1 (ENSHBUG00000002938) #15 lgals9l5 (ENSHBUG00000002863) #17 MYO18A (ENSHBUG00000002843) pipox (ENSHBUG00000000049) Haplochromini_A ANCESTRAL SPECIES 54 ENSGT00940000154981.bb.a.h ENSGT00950000182923.B.a ENSGT00990000203615.b.a.b.c.b ENSGT00390000012058.c.a.f ENSGT00940000159493 ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000176131.d.a ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713 ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT00940000164085.d.b ENSGT00390000006454 ENSGT00940000158439.m ENSGT00940000158882 P. nyererei MODERN SPECIES 538 ENSPNYG00000019634 kcnj13 (ENSPNYG00000019649) efhd1 (ENSPNYG00000019662) NLRX1 (ENSPNYG00000019696) ENSPNYG00000019731 nlk2 (ENSPNYG00000019894) #26 NGEF (ENSPNYG00000019953) mrps23 (ENSPNYG00000019983) ENSPNYG00000020004 ##11 vezf1b (ENSPNYG00000020051) #12 SMCO4 (ENSPNYG00000020087) ENSPNYG00000020097 NF1 (ENSPNYG00000020113) #18 ENSPNYG00000020237 #19 ENSPNYG00000020246 akap1b (ENSPNYG00000020264) #22 cuedc1b (ENSPNYG00000020277) #13 wsb1 (ENSPNYG00000020289) #14 Haplochromini_B ANCESTRAL SPECIES 58 ENSGT00390000012058.c.a.f ENSGT00940000159493 ENSGT00940000166084.B.a.a.e ENSGT01100000263636.d.a.b ENSGT00950000182849.A.f.a.a ENSGT00940000158363 #26 ENSGT01030000234571.b.b.a.a.a ENSGT00390000009030 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000015987 ENSGT01100000263804.b ENSGT00940000160802.a #19 ENSGT00740000117046 ENSGT00550000074797.a.a #18 ENSGT00390000001360.q.b #22 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000176131.d.a ENSGT00940000162258 #17 ENSGT00940000155768.B ENSGT00390000011000 ENSGT00940000156995.a ENSGT00940000155713.db.a ENSGT00940000155599.i.a.a ENSGT00940000155599.j ENSGT01030000234522.A.k.b ENSGT00940000164085.d.b ENSGT00940000155713.db.b ENSGT00390000006454 Eastern happy MODERN SPECIES 5 ENSACLG00000023134 NLRX1 (ENSACLG00000023103) ENSACLG00000023089 ENSACLG00000022863 ENSACLG00000022840 nlk2 (ENSACLG00000022772) #26 NGEF (ENSACLG00000022730) mrps23 (ENSACLG00000022720) ENSACLG00000022714 ##11 vezf1b (ENSACLG00000022666) #12 SMCO4 (ENSACLG00000022650) ENSACLG00000022637 ENSACLG00000022625 #19 ENSACLG00000022611 NF1 (ENSACLG00000022486) #18 akap1b (ENSACLG00000022390) #22 cuedc1b (ENSACLG00000022356) #13 wsb1 (ENSACLG00000022345) #14 KSR1 (ENSACLG00000022229) #15 ENSACLG00000022211 lgals9l5 (ENSACLG00000022173) #17 ENSACLG00000022161 MYO18A (ENSACLG00000022040) pipox (ENSACLG00000022015) SEZ6 (ENSACLG00000021962) ENSACLG00000021937 PHF12 (ENSACLG00000021927) ENSACLG00000021902 dhrs13b.1 (ENSACLG00000021892) dhrs13a.3 (ENSACLG00000021883) ENSACLG00000021879 Zebra mbuna MODERN SPECIES 1096 NLRX1 (ENSMZEG00005001269) ENSMZEG00005001252 ENSMZEG00005001235 ENSMZEG00005001127 nlk2 (ENSMZEG00005001076) #26 ENSMZEG00005001065 mrps23 (ENSMZEG00005001041) ENSMZEG00005001005 ##11 vezf1b (ENSMZEG00005000969) #12 SMCO4 (ENSMZEG00005000952) ENSMZEG00005000927 ENSMZEG00005000897 ENSMZEG00005000883 #19 ENSMZEG00005000862 NF1 (ENSMZEG00005000651) #18 akap1b (ENSMZEG00005000637) #22 cuedc1b (ENSMZEG00005000623) #13 wsb1 (ENSMZEG00005000605) #14 ENSMZEG00005000582 KSR1 (ENSMZEG00005000484) #15 lgals9l5 (ENSMZEG00005000428) #17 MYO18A (ENSMZEG00005000224) pipox (ENSMZEG00005000215) ENSMZEG00005000073 ENSMZEG00005019448 ENSMZEG00005019445 abcg4b (ENSMZEG00005019441) lyrm9 (ENSMZEG00005019434) #25 ift20 (ENSMZEG00005019427) tnfaip1 (ENSMZEG00005019421) ENSMZEG00005019418 Cod MODERN SPECIES 7 ENSGMOG00000029222 ENSGMOG00000015403 ENSGMOG00000023819 ENSGMOG00000031427 ENSGMOG00000027987 ENSGMOG00000029712 ENSGMOG00000003648 ENSGMOG00000023525 ENSGMOG00000030985 dhrs13b.1 (ENSGMOG00000014085) PHF12 (ENSGMOG00000014021) SEZ6 (ENSGMOG00000014007) pipox (ENSGMOG00000010078) ENSGMOG00000010045 ENSGMOG00000015388 #18 ENSGMOG00000015334 #22 mrps23 (ENSGMOG00000025120) ENSGMOG00000010933 ENSGMOG00000010948 ENSGMOG00000010967 ENSGMOG00000010977 arcn1b (ENSGMOG00000010984) ENSGMOG00000032858 ENSGMOG00000010992 ENSGMOG00000031032 ENSGMOG00000028563 ENSGMOG00000026593 zgc:113279 (ENSGMOG00000015477) ENSGMOG00000031641 ENSGMOG00000028800 ENSGMOG00000025322 Osteoglossiformes ANCESTRAL SPECIES 106 ENSGT00940000164085.d.b ENSGT00940000155599.j ENSGT00940000155599.i.a ENSGT00940000155713.s ENSGT00940000156995.a ENSGT00390000011000 ENSGT00940000155768.B ENSGT01090000260005.a.a.b.b ##11 ENSGT00940000155932.b.a.g #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00550000074797.b ##18 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.b ##23 ENSGT00940000155420.a.a.a #23 ENSGT00390000009030 ENSGT00940000159752 #24 ENSGT00390000002625 #25 ENSGT00940000158363 #26 ENSGT00940000166439 #27 ENSGT00390000002453 #28 ENSGT00940000158096.e #30 ENSGT00940000157962.b ENSGT00390000001742.b #31 Asian bonytongue MODERN SPECIES 1 DHRS13 (ENSSFOG00015013003) ENSSFOG00015032667 PHF12 (ENSSFOG00015012956) SEZ6 (ENSSFOG00015012923) pipox (ENSSFOG00015012896) MYO18A (ENSSFOG00015012791) ENSSFOG00015030601 ##11 vezf1b (ENSSFOG00015012743) #12 cuedc1b (ENSSFOG00015026495) #13 wsb1 (ENSSFOG00015012673) #14 KSR1 (ENSSFOG00015012645) #15 lgals9l5 (ENSSFOG00015024860) #17 OMG (ENSSFOG00015026387) #19 ENSSFOG00015012578 #20 NF1 (ENSSFOG00015012294) ##18 akap1b (ENSSFOG00015012205) #22 ENSSFOG00015031403 msi2b (ENSSFOG00015012168) #23 mrps23 (ENSSFOG00015012158) nos2a (ENSSFOG00015012124) #24 lyrm9 (ENSSFOG00015029322) #25 nlk2 (ENSSFOG00015012084) #26 ENSSFOG00015012069 #27 bhlha9 (ENSSFOG00015030142) #28 WSCD1 (ENSSFOG00015012012) #30 usp25 (ENSSFOG00015011888) zgc:153372 (ENSSFOG00015011852) #31 NRIP1 (ENSSFOG00015011843) #32 samsn1a (ENSSFOG00015011804) #35 hspa13 (ENSSFOG00015011786) #36 GDPD5 (ENSSFOG00015011690) #33 P. kingsleyae MODERN SPECIES 652 OMG (ENSPKIG00000017323) #19 NF1 (ENSPKIG00000017206) ##18 akap1b (ENSPKIG00000017133) #22 MSI2 (ENSPKIG00000017107) ##23 Osteoglossocephalai ANCESTRAL SPECIES 637 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00940000155420.a.b ##23 Clupeocephala ANCESTRAL SPECIES 304 ENSGT00940000158439.n ENSGT00940000156706.b ENSGT00390000000288 ENSGT00940000164085.d.a ENSGT00390000018761 ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00940000156995.b ENSGT00940000155768.A ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.b ##12 ENSGT00390000006762.d ##13 ENSGT00940000156066.p ##15 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00940000155420.a.b ##23 Otomorpha ANCESTRAL SPECIES 331 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00510000046732.A.c ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00940000155713 ENSGT00940000156995.b ENSGT00940000155768.A ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.b ##12 ENSGT00390000006762.d ##13 ENSGT00940000156066.p ##15 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00940000155420.a.b ##23 Otophysi ANCESTRAL SPECIES 158 ENSGT00940000158090 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00510000046732.A.c ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00940000155713 ENSGT00940000156995.b ENSGT00940000155768.A ENSGT00940000155932.b.b ##12 ENSGT00390000006762.d ##13 ENSGT00940000156066.p ##15 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00940000155420.a.b.a ##23 ENSGT00390000002453.b ##28 ENSGT00940000158096.f ##30 ENSGT00940000157962 ENSGT00730000110920.a ENSGT00940000154907.a.b ENSGT00940000154907.a.a.ac ENSGT00940000154907.a.a.`c ENSGT00940000167100.a ENSGT01030000234626.E ENSGT00940000155207.a.b.i.a ENSGT00940000167170 ENSGT00940000157165.e.b ENSGT00950000182942.b.e ENSGT00390000018633 Characiphysae ANCESTRAL SPECIES 39 ENSGT00940000156844.a ENSGT00940000155478.hb.a.a ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000174501 ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT01090000260005.a.a.b.a.a ##11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 Characiphysae_b ANCESTRAL SPECIES 38 ENSGT00940000154656.pb.b.a ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.hb.a.a ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000167295 #10 ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.a #12 ENSGT00390000006762.c #13 ENSGT00890000139406.a #14 ENSGT00940000156066.o #15 ENSGT00940000162258 #17 ENSGT00550000074797.a.b ##18 ENSGT00940000160802.b ##19 ENSGT00390000001360.q.a ##22 ENSGT00550000074797.a.a #18 ENSGT00940000160802.a #19 ENSGT00990000204401 #20 ENSGT00940000181892 #21 ENSGT00390000001360.q.b #22 ENSGT00940000155420.a.a #23 Characoidei ANCESTRAL SPECIES 40 ENSGT00940000155768.A ENSGT01090000260005.a.a.b.b ##11 ENSGT00940000155932.b.b ##12 ENSGT00390000006762.d ##13 ENSGT00940000156066.p ##15 ENSGT00390000001360.q.a ##22 ENSGT00940000155420.a.b.a ##23 ENSGT00390000002453.b ##28 ENSGT00940000158096.f ##30 ENSGT00940000157962 ENSGT00390000007999 #32 ENSGT00940000157806.f ##35 ENSGT00940000159690.b ##33 ENSGT00940000156163.i.b ##37 ENSGT00940000160984 ENSGT00730000110920.a ENSGT00940000154907.a.b ENSGT00940000154907.a.a.ac.c ENSGT00940000154907.a.a.ac.d ENSGT00940000154907.a.a.`c.a.a ENSGT00940000154907.a.a.`c.b Red-bellied piranha MODERN SPECIES 193 VEZF1 (ENSPNAG00000015573) ##12 cuedc1a (ENSPNAG00000015560) ##13 KSR1 (ENSPNAG00000015529) ##15 ENSPNAG00000015327 #17 NF1 (ENSPNAG00000015280) ##18 OMG (ENSPNAG00000014991) ##19 ENSPNAG00000014984 ##22 msi2a (ENSPNAG00000014957) ##23 ENSPNAG00000014891 #27 bhlha9 (ENSPNAG00000003312) ##28 WSCD1 (ENSPNAG00000014881) ##30 usp25 (ENSPNAG00000014852) NRIP1 (ENSPNAG00000003221) #32 samsn1b (ENSPNAG00000014697) ##35 GDPD5 (ENSPNAG00000014662) ##33 serpinh1a (ENSPNAG00000014640) ##37 SLC1A3 (ENSPNAG00000014623) nipblb (ENSPNAG00000014586) nup155 (ENSPNAG00000014406) ENSPNAG00000014250 ENSPNAG00000005135 Cyprininae ANCESTRAL SPECIES 211 ENSGT00940000158090.i ENSGT00390000012955.a ENSGT00940000154769.hd.a ENSGT00390000013989.b.c ENSGT00510000046732.A.c.a ENSGT00940000155599.i.b.b ENSGT00940000155599.i.a.b.i ENSGT00940000155713.z.b ENSGT00940000156995.b.a ENSGT00940000155768.A.a ENSGT00940000155932.b.b.a ##12 ENSGT00390000006762.d.b ##13 ENSGT00940000156066.p.a ##15 ENSGT00550000074797.a.b.c ##18 ENSGT00940000160802.b.a ##19 ENSGT00390000001360.q.a.b ##22 ENSGT00940000155420.a.b.a.b ##23 ENSGT00390000002453.b.a ##28 ENSGT00940000158096.f.b ##30 ENSGT00940000157962.f ENSGT00390000007999.l.a ##32 ENSGT00940000157806.f.a ##35 ENSGT00940000159690.b.b ##33 ENSGT00940000156163.i.b.e ##37 ENSGT00730000110920.a.j ENSGT00940000154907.a.a.ac.f ENSGT00940000154907.a.a.`c.f.a.b ENSGT00940000154907.a.a.`c.f.a.a ENSGT00940000154907.a.a.`c.e.b ENSGT00940000167100.a ENSGT01030000234626.E.e Cyprininae_a ANCESTRAL SPECIES 11 ENSGT00940000158090.i ENSGT00390000012955.a ENSGT00940000154769.hd.a ENSGT00390000013989.b.c ENSGT00510000046732.A.c.a ENSGT00940000155599.i.b.b ENSGT00940000155599.i.a.b.i ENSGT00940000155713.z.b ENSGT00940000156995.b.a ENSGT00940000155768.A.a.b ENSGT00940000155932.b.b.a ##12 ENSGT00390000006762.d.b ##13 ENSGT00940000156066.p.a ##15 ENSGT00550000074797.a.b.c ##18 ENSGT00940000160802.b.a ##19 ENSGT00390000001360.q.a.b ##22 ENSGT00940000155420.a.b.a.b ##23 ENSGT00390000002453.b.a ##28 ENSGT00940000158096.f.b ##30 ENSGT00940000157962.f ENSGT00390000007999.l.a ##32 ENSGT00940000157806.f.a ##35 ENSGT00940000159690.b.b ##33 ENSGT00940000156163.i.b.e ##37 ENSGT00730000110920.a.j ENSGT00940000154907.a.b ENSGT00940000154907.a.a.ac.f ENSGT00940000154907.a.a.`c.f.a.b ENSGT00940000154907.a.a.`c.f.a.a ENSGT00940000154907.a.a.`c.e.b ENSGT00940000167100.a Common carp reference MODERN SPECIES 32 slc1a3b (ENSCCRG00000059091) ENSCCRG00000027392 ucp3 (ENSCCRG00000073199) ucp2 (ENSCCRG00000070618) dnajb13 (ENSCCRG00000078671) rab6a (ENSCCRG00000027433) plekhb1 (ENSCCRG00000027618) dhrs13a.2 (ENSCCRG00000060856) ENSCCRG00000070095 SEZ6 (ENSCCRG00000025717) ENSCCRG00000015947 ENSCCRG00000015860 ##12 cuedc1a (ENSCCRG00000057828) ##13 ENSCCRG00000048965 ##15 ENSCCRG00000052969 ##18 ENSCCRG00000013418 ##22 msi2a (ENSCCRG00000075931) ##23 ENSCCRG00000036169 ##30 usp25 (ENSCCRG00000032907) ENSCCRG00000058214 ##32 samsn1b (ENSCCRG00000043301) ##35 serpinh1a (ENSCCRG00000029169) ##37 acer3 (ENSCCRG00000008118) ENSCCRG00000013589 ENSCCRG00000013551 ENSCCRG00000008139 ##33 ENSCCRG00000069057 ENSCCRG00000052869 mmp30 (ENSCCRG00000056643) acat1 (ENSCCRG00000057031) tmprss2 (ENSCCRG00000001007) Golden-line barbel MODERN SPECIES 31 dnajb13 (ENSSGRG00000025411) mrpl48 (ENSSGRG00000025412) rab6a (ENSSGRG00000025413) plekhb1 (ENSSGRG00000025414) ENSSGRG00000025415 dhrs13a.2 (ENSSGRG00000025417) dhrs13a.1 (ENSSGRG00000025418) PHF12 (ENSSGRG00000025419) SEZ6 (ENSSGRG00000025423) ENSSGRG00000025477 ENSSGRG00000028506 ##12 cuedc1a (ENSSGRG00000028507) ##13 KSR1 (ENSSGRG00000028508) ##15 NF1 (ENSSGRG00000028569) ##18 ENSSGRG00000029231 ##19 ENSSGRG00000029232 ##22 MSI2 (ENSSGRG00000029233) ##23 msi2a (ENSSGRG00000029234) ##23 ENSSGRG00000029235 ##23 bhlha9 (ENSSGRG00000029236) ##28 WSCD1 (ENSSGRG00000029238) ##30 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 608 ENSGT00390000006762.d.c ##13 ENSGT00940000156066.p.e ##15 ENSGT00940000162258.wb.a.a #17 ENSGT00550000074797.a.b.a ##18 ENSGT00940000160802.b.d ##19 ENSGT00390000001360.q.a.c ##22 ENSGT00940000155420.a.b.d.a.a ##23 ENSGT00940000166439.g.a #27 ENSGT00940000165687.d.b.b ENSGT00940000166502.c ENSGT00940000154442.fd ENSGT00940000160515 ENSGT00390000017980 ENSGT00940000164304.g ENSGT00390000005094.g Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000164085.d.a.g ENSGT01000000221566 ENSGT00940000155599.i.b.c ENSGT00940000155713.rb.b ENSGT00940000156995.b.d ENSGT00940000155768.A.e.a ENSGT01090000260005.a.a.b.a.b.f #11 ENSGT00940000155932.b.b.d ##12 ENSGT00390000006762.d.c ##13 ENSGT00940000156066.p.e ##15 ENSGT00940000162258.wb.b #17 ENSGT00940000154348.c.b.b.b.`b.b ENSGT00940000162258.wb.a.a #17 ENSGT00550000074797.a.b.a ##18 ENSGT00940000160802.b.d ##19 ENSGT00390000001360.q.a.c ##22 ENSGT00940000155420.a.b.d.a.a ##23 ENSGT00940000166439.g.a #27 ENSGT00940000165687.d.b.b ENSGT00940000166502.c ENSGT00940000154442.fd ENSGT00940000164304.g ENSGT00390000005094.g ENSGT00940000158347.y.d ENSGT01050000245018.a ENSGT00940000159451.e ENSGT00940000160693.e ENSGT01050000244864.B.a.h.c ENSGT01030000234513.B.a.d.b ENSGT00390000002414.ac ENSGT00940000165703.e Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000164085.d.a.g ENSGT01000000221566 ENSGT00940000155599.i.b.c ENSGT00940000155713.rb.b ENSGT00940000156995.b.d ENSGT00940000155768.A.e.a ENSGT01090000260005.a.a.b.a.b.f #11 ENSGT00940000155932.b.b.d ##12 ENSGT00390000006762.d.c ##13 ENSGT00940000156066.p.e ##15 ENSGT00940000162258.wb.b #17 ENSGT00940000154348.c.b.b.b.`b.b ENSGT00940000162258.wb.a.a #17 ENSGT00550000074797.a.b.a ##18 ENSGT00940000160802.b.d ##19 ENSGT00390000001360.q.a.c ##22 ENSGT00940000155420.a.b.d.a.a ##23 ENSGT00940000166439.g.a #27 ENSGT00940000165687.d.b.b ENSGT00940000166502.c ENSGT00940000154442.fd ENSGT00940000164304.g.c.a ENSGT00390000005094.g ENSGT00940000158347.y.d ENSGT01050000245018.a ENSGT00940000159451.e ENSGT00940000160693.e ENSGT01050000244864.B.a.h.c ENSGT01030000234513.B.a.d.b ENSGT00390000002414.ac ENSGT00940000165703.e Coho salmon MODERN SPECIES 20 lhx1b (ENSOKIG00005047799) dhrs13a.2 (ENSOKIG00005047818) PHF12 (ENSOKIG00005047832) SEZ6 (ENSOKIG00005047968) ENSOKIG00005048515 ENSOKIG00005048561 ENSOKIG00005048666 #11 VEZF1 (ENSOKIG00005048680) ##12 cuedc1a (ENSOKIG00005048711) ##13 KSR1 (ENSOKIG00005048723) ##15 ENSOKIG00005048734 #17 ENSOKIG00005048737 ENSOKIG00005048746 #17 NF1 (ENSOKIG00005048822) ##18 OMG (ENSOKIG00005048998) ##19 ENSOKIG00005049004 ##22 msi2a (ENSOKIG00005049039) ##23 ENSOKIG00005049086 #27 ENSOKIG00005049090 ENSOKIG00005049094 nono (ENSOKIG00005049108) npas2 (ENSOKIG00005049119) RADX (ENSOKIG00005049131) rnf128a (ENSOKIG00005049154) tbc1d8b (ENSOKIG00005049187) ZMYM3 (ENSOKIG00005049316) ENSOKIG00005049435 gjb1a (ENSOKIG00005049439) igbp1 (ENSOKIG00005049447) wnt11f2 (ENSOKIG00005049455) eda (ENSOKIG00005049469) Rainbow trout MODERN SPECIES 1 acaca (ENSOMYG00000034635) aatf (ENSOMYG00000034445) lhx1b (ENSOMYG00000034433) ENSOMYG00000034421 dhrs13a.2 (ENSOMYG00000034407) ENSOMYG00000034342 SEZ6 (ENSOMYG00000033254) ENSOMYG00000031347 ENSOMYG00000030860 #11 ENSOMYG00000030847 ##12 cuedc1a (ENSOMYG00000030830) ##13 ENSOMYG00000030764 ##15 ENSOMYG00000030665 #17 ENSOMYG00000030658 ##19 ENSOMYG00000023704 ##18 ENSOMYG00000022359 ##22 ENSOMYG00000054310 ENSOMYG00000048495 msi2a (ENSOMYG00000022222) ##23 ENSOMYG00000022185 #27 ENSOMYG00000022173 ENSOMYG00000022100 ENSOMYG00000022024 ENSOMYG00000021955 RADX (ENSOMYG00000021904) ENSOMYG00000074639 rnf128a (ENSOMYG00000021882) ENSOMYG00000021872 tbc1d8b (ENSOMYG00000016199) ENSOMYG00000014916 ENSOMYG00000014852 Salmo ANCESTRAL SPECIES 17 ENSGT00940000155768.A.e.a ENSGT01090000260005.a.a.b.a.b.f #11 ENSGT00940000155932.b.b.d ##12 ENSGT00390000006762.d.c ##13 ENSGT00940000156066.p.e ##15 ENSGT00940000154348.c.b.b.b.`b.b.a ENSGT00940000162258.wb.a.a #17 ENSGT00940000160802.b.d ##19 ENSGT00550000074797.a.b.a ##18 ENSGT00390000001360.q.a.c ##22 ENSGT00940000155420.a.b.d.a.a ##23 ENSGT00940000166439.g.a #27 ENSGT00940000165687.d.b.b ENSGT00940000166502.c ENSGT00940000154442.fd ENSGT00940000164304.g ENSGT00390000005094.g ENSGT00940000158347.y.d ENSGT00940000159451.e ENSGT01050000245018.a ENSGT00940000160693.e ENSGT01050000244864.B.a.h.c ENSGT01030000234513.B.a.d.b ENSGT00390000002414.ac ENSGT00940000165703.e River trout MODERN SPECIES 10 aatf (ENSSTUG00000007855) lhx1b (ENSSTUG00000007846) dhrs13a.2 (ENSSTUG00000007831) PHF12 (ENSSTUG00000007772) SEZ6 (ENSSTUG00000006455) PIPOX (ENSSTUG00000006407) ENSSTUG00000006108 ENSSTUG00000006069 #11 VEZF1 (ENSSTUG00000006051) ##12 cuedc1a (ENSSTUG00000006040) ##13 KSR1 (ENSSTUG00000005924) ##15 ENSSTUG00000005914 ENSSTUG00000005840 #17 OMG (ENSSTUG00000005833) ##19 NF1 (ENSSTUG00000005435) ##18 ENSSTUG00000005388 ##22 ENSSTUG00000005381 msi2a (ENSSTUG00000005193) ##23 ENSSTUG00000005159 #27 ENSSTUG00000005126 glra4b (ENSSTUG00000005091) nono (ENSSTUG00000005073) npas2 (ENSSTUG00000004982) RADX (ENSSTUG00000004964) rnf128a (ENSSTUG00000004951) ENSSTUG00000004944 tbc1d8b (ENSSTUG00000004021) ENSSTUG00000003921 ZMYM3 (ENSSTUG00000002785) gjb1a (ENSSTUG00000036952) igbp1 (ENSSTUG00000036947) Atlantic salmon MODERN SPECIES 23 PIPOX (ENSSSAG00000048791) ENSSSAG00000048860 ENSSSAG00000096902 #11 ENSSSAG00000049154 ##12 ENSSSAG00000085532 cuedc1a (ENSSSAG00000049186) ##13 ENSSSAG00000093866 ENSSSAG00000049273 ##15 ENSSSAG00000049827 ENSSSAG00000088092 #17 ENSSSAG00000108288 ENSSSAG00000049790 #17 ENSSSAG00000050092 ##18 ENSSSAG00000107151 ENSSSAG00000057501 ##19 ENSSSAG00000118054 ##22 msi2a (ENSSSAG00000057624) ##23 ENSSSAG00000102532 ENSSSAG00000063464 #27 ENSSSAG00000063475 ENSSSAG00000063491 ENSSSAG00000063527 ENSSSAG00000063571 cssa04hxorf57 (ENSSSAG00000064100) rnf128a (ENSSSAG00000064110) tbc1d8b (ENSSSAG00000064182) ENSSSAG00000110033 ENSSSAG00000068659 ENSSSAG00000094186 gjb1a (ENSSSAG00000068768) igbp1 (ENSSSAG00000068773) Huchen MODERN SPECIES 19 PIPOX (ENSHHUG00000005943) ENSHHUG00000005961 ENSHHUG00000005973 ENSHHUG00000006297 #11 VEZF1 (ENSHHUG00000006306) ##12 cuedc1a (ENSHHUG00000006321) ##13 KSR1 (ENSHHUG00000006332) ##15 ENSHHUG00000006338 #17 ENSHHUG00000006345 ENSHHUG00000006350 #17 NF1 (ENSHHUG00000006415) ##18 OMG (ENSHHUG00000006598) ##19 ENSHHUG00000006605 ##22 msi2a (ENSHHUG00000006635) ##23 ENSHHUG00000006951 #27 ENSHHUG00000006954 glra4b (ENSHHUG00000006969) nono (ENSHHUG00000006979) mtnr1c (ENSHHUG00000006987) vma21 (ENSHHUG00000007000) ENSHHUG00000007012 ENSHHUG00000007018 npas2 (ENSHHUG00000007023) RADX (ENSHHUG00000007035) rnf128a (ENSHHUG00000007057) tbc1d8b (ENSHHUG00000007075) ZMYM3 (ENSHHUG00000008802) ENSHHUG00000008995 Salmoninae ANCESTRAL SPECIES 12 ENSGT00390000000288.d ENSGT00940000164085.d.a.g ENSGT01000000221566 ENSGT00940000155599.i.b.c ENSGT00940000155713.rb.b ENSGT00940000156995.b.d ENSGT00940000155768.A.e.a ENSGT01090000260005.a.a.b.a.b #11 ENSGT00940000155932.b.b.d ##12 ENSGT00940000155932.b.b.c ##12 ENSGT00390000006762.d.d ##13 ENSGT00940000156066.p.f ##15 ENSGT00940000162258.wb.a.b #17 ENSGT00550000074797.a.b.b ##18 ENSGT00940000160802.b.c ##19 ENSGT00390000001360.q.a.d ##22 ENSGT00940000155420.a.b.d.a.b ##23 ENSGT00940000166439.g.b #27 ENSGT00940000153467.a.b.f ENSGT00940000165687.d.b.a ENSGT00940000153467.a.b.e.b.b ENSGT00390000001289.b.a ENSGT00940000153460.c.b.c.a.c ENSGT00940000154833.b.d ENSGT00950000182941.b.a.k ENSGT00940000156341.e.b.b ENSGT00390000011545.a ENSGT01100000263502.A.a.a.a.a.a.e ENSGT00510000051633.d ENSGT00940000158723.g ENSGT00940000165126.g Salmoninae_a ANCESTRAL SPECIES ENSGT00390000001360.q.a.d ##22 Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00390000018761 ENSGT00940000155599.i.b.d ENSGT00940000155599.i.a.b ENSGT00940000155713.rb.a ENSGT00940000156995.b.c ENSGT00990000214279 ENSGT00940000155768.A.e.b ENSGT01090000260005.a.a.b.a.b.e #11 ENSGT00940000155932.b.b.c ##12 ENSGT00390000006762.d.d ##13 ENSGT00940000156066.p.f ##15 ENSGT00940000162258.wb.a.b #17 ENSGT00550000074797.a.b.b ##18 ENSGT00940000160802.b.c ##19 ENSGT00940000181892 #21 ENSGT00390000001360.q.a.d ##22 ENSGT00940000155420.a.b.d.a.b ##23 ENSGT00940000166439.g.b #27 ENSGT00940000153467.a.b.f ENSGT00940000165687.d.b.a ENSGT00940000166502.d ENSGT00940000156455 ENSGT00940000154442.gd ENSGT00660000097471 ENSGT00390000017980 ENSGT00940000164304.h ENSGT00940000158347.y.c ENSGT00940000159451.f ENSGT01050000245018.b ENSGT00940000160693.f ENSGT01050000244864.B.a.h.d Oncorhynchus_a ANCESTRAL SPECIES 19 ENSGT00940000164085.d.a.h ENSGT00390000018761 ENSGT00940000155599.i.a.b ENSGT00940000155713.rb.a ENSGT00940000156995.b.c ENSGT00990000214279 ENSGT00940000155768.A.e.b ENSGT01090000260005.a.a.b.a.b.e #11 ENSGT00940000155932.b.b.c ##12 ENSGT00390000006762.d.d ##13 ENSGT00940000156066.p.f ##15 ENSGT00940000162258.wb.a.b #17 ENSGT00550000074797.a.b.b ##18 ENSGT00940000160802.b.c ##19 ENSGT00940000181892 #21 ENSGT00390000001360.q.a.d ##22 ENSGT00940000155420.a.b.d.a.b ##23 ENSGT00940000166439.g.b #27 ENSGT00940000153467.a.b.f ENSGT00940000166502.d ENSGT00940000156455 ENSGT00940000154442.gd ENSGT00660000097471 ENSGT00390000017980 ENSGT00940000164304.h ENSGT00940000158347.y.c ENSGT00940000159451.f ENSGT01050000245018.b ENSGT00940000160693.f ENSGT01050000244864.B.a.h.d ENSGT01030000234513.B.a.d.a Coho salmon MODERN SPECIES 26 MRM1 (ENSOKIG00005044762) dhrs13a.1 (ENSOKIG00005044794) PHF12 (ENSOKIG00005044821) SEZ6 (ENSOKIG00005044948) ENSOKIG00005045326 ENSOKIG00005045440 ENSOKIG00005046148 #11 ENSOKIG00005046155 VEZF1 (ENSOKIG00005046170) ##12 cuedc1a (ENSOKIG00005046211) ##13 KSR1 (ENSOKIG00005046280) ##15 ENSOKIG00005046424 #17 NF1 (ENSOKIG00005046457) ##18 OMG (ENSOKIG00005046560) ##19 ENSOKIG00005046563 #21 ENSOKIG00005046571 ##22 msi2a (ENSOKIG00005046588) ##23 ENSOKIG00005046696 ENSOKIG00005046703 #27 DRP2 (ENSOKIG00005046772) glra4b (ENSOKIG00005047613) aifm1 (ENSOKIG00005047827) nono (ENSOKIG00005048794) zgc:113208 (ENSOKIG00005048803) vma21 (ENSOKIG00005048808) ENSOKIG00005048813 npas2 (ENSOKIG00005048840) rnf128a (ENSOKIG00005048942) tbc1d8b (ENSOKIG00005049020) ENSOKIG00005049300 ZMYM3 (ENSOKIG00005049354) Chinook salmon MODERN SPECIES 33 ENSOTSG00005012003 lhx1b (ENSOTSG00005012028) ENSOTSG00005012032 dhrs13a.1 (ENSOTSG00005012034) PHF12 (ENSOTSG00005012043) SEZ6 (ENSOTSG00005012073) ENSOTSG00005013040 ENSOTSG00005013043 VEZF1 (ENSOTSG00005013079) ##12 cuedc1a (ENSOTSG00005013085) ##13 KSR1 (ENSOTSG00005013088) ##15 ENSOTSG00005013140 #17 NF1 (ENSOTSG00005013144) ##18 OMG (ENSOTSG00005013167) ##19 ENSOTSG00005013168 #21 ENSOTSG00005013169 ##22 msi2a (ENSOTSG00005013171) ##23 ENSOTSG00005013264 #27 DRP2 (ENSOTSG00005013275) glra4b (ENSOTSG00005015239) aifm1 (ENSOTSG00005015259) nono (ENSOTSG00005017451) zgc:113208 (ENSOTSG00005017453) vma21 (ENSOTSG00005017456) npas2 (ENSOTSG00005017459) ENSOTSG00005017460 GPR61 (ENSOTSG00005017462) AMIGO1 (ENSOTSG00005017464) SYPL2 (ENSOTSG00005017466) sort1b (ENSOTSG00005017469) ENSOTSG00005017491 Rainbow trout MODERN SPECIES 3 lhx1b (ENSOMYG00000042213) ENSOMYG00000042223 dhrs13a.2 (ENSOMYG00000042226) dhrs13a.1 (ENSOMYG00000042231) ENSOMYG00000042252 SEZ6 (ENSOMYG00000042348) ENSOMYG00000042819 ENSOMYG00000042971 #11 ENSOMYG00000042975 ##12 cuedc1a (ENSOMYG00000042988) ##13 ENSOMYG00000043030 ##15 lgals9 (ENSOMYG00000043134) #17 ENSOMYG00000043193 ##18 ENSOMYG00000043372 ##19 ENSOMYG00000043376 #21 ENSOMYG00000043381 ##22 ENSOMYG00000043385 msi2a (ENSOMYG00000043394) ##23 ENSOMYG00000043415 ENSOMYG00000043419 #27 ENSOMYG00000043592 ENSOMYG00000044196 glra4b (ENSOMYG00000044200) aifm1 (ENSOMYG00000044310) nono (ENSOMYG00000045150) zgc:113208 (ENSOMYG00000045154) VMA21 (ENSOMYG00000045159) ENSOMYG00000065673 npas2 (ENSOMYG00000045181) rnf128a (ENSOMYG00000045220) tbc1d8b (ENSOMYG00000045267) Salmo ANCESTRAL SPECIES ENSGT00390000001360.q.a.d ##22 Huchen MODERN SPECIES 2 hand2 (ENSHHUG00000008422) ENSHHUG00000008484 ENSHHUG00000010959 #11 VEZF1 (ENSHHUG00000010968) ##12 cuedc1a (ENSHHUG00000010983) ##13 KSR1 (ENSHHUG00000011025) ##15 ENSHHUG00000011133 #17 NF1 (ENSHHUG00000011146) ##18 OMG (ENSHHUG00000011259) ##19 ENSHHUG00000011263 ##22 msi2a (ENSHHUG00000011278) ##23 ENSHHUG00000011309 ENSHHUG00000011313 #27 DRP2 (ENSHHUG00000011318) ENSHHUG00000011556 glra4b (ENSHHUG00000011564) aifm1 (ENSHHUG00000011582) nono (ENSHHUG00000012690) zgc:113208 (ENSHHUG00000012706) vma21 (ENSHHUG00000012715) npas2 (ENSHHUG00000012728) ENSHHUG00000012746 ENSHHUG00000012752 rnf128a (ENSHHUG00000012761) tbc1d8b (ENSHHUG00000012781) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000001360.r ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00390000001360.r ##22 Otomorpha ANCESTRAL SPECIES ENSGT00390000001360.r ##22 Otophysi ANCESTRAL SPECIES ENSGT00390000001360.r ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00390000001360.r ##22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 11 ENSGT00390000013989.a.b ENSGT00390000013003.e.a.a.b ENSGT00940000157639.o ENSGT00900000141021.a.b ENSGT00940000159889.b.b.e.a ENSGT00940000154660.b ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.e ENSGT00390000001360.r.a ##22 ENSGT00940000159228.b.a.b.a ENSGT00940000163422 ENSGT00940000154611.ad.a.k.b ENSGT00940000163581.f.a.hb.a ENSGT00940000163126.a.b.r ENSGT00940000158995.a.d ENSGT00940000154595.fb ENSGT00940000159258.d.e ENSGT00980000198641.a ENSGT00390000013841.hb.b ENSGT00950000183110.b.a.c.b ENSGT00940000160036.d ENSGT00940000159946.g.b ENSGT00390000012913.a.b.a ENSGT00940000160926.b Cyprininae_a ANCESTRAL SPECIES 509 ENSGT01030000234614.B.b.e ENSGT00390000001360.r.a ##22 ENSGT00940000159228.b.a.b.a ENSGT00940000154611.ad.a.k.b ENSGT00940000163581.f.a.hb.a ENSGT00940000163126.a.b.r ENSGT00940000158995.a.d ENSGT00940000154595.fb ENSGT00940000159258.d.e ENSGT00980000198641.a ENSGT00390000013841.hb.b ENSGT00950000183110.b.a.c.b ENSGT00940000160036.d ENSGT00940000159946.g.b Common carp reference MODERN SPECIES 5 ier5 (ENSCCRG00000031035) tal1 (ENSCCRG00000031038) ENSCCRG00000054830 ENSCCRG00000076969 ENSCCRG00000012234 PATJ (ENSCCRG00000075387) tm2d1 (ENSCCRG00000068740) nfia (ENSCCRG00000077143) ENSCCRG00000069674 frem1b (ENSCCRG00000003389) atpaf1 (ENSCCRG00000007113) ENSCCRG00000007115 nrd1b (ENSCCRG00000007124) axdnd1 (ENSCCRG00000008234) nphs2 (ENSCCRG00000008239) tdrd5 (ENSCCRG00000027290) ##22 FAM163A (ENSCCRG00000042112) ENSCCRG00000064638 ENSCCRG00000062100 ENSCCRG00000064952 ENSCCRG00000006777 ENSCCRG00000080900 ENSCCRG00000005187 ENSCCRG00000054259 ENSCCRG00000045234 ENSCCRG00000006640 marchf2 (ENSCCRG00000073523) hnrnpm (ENSCCRG00000006562) ENSCCRG00000040295 gpx4a (ENSCCRG00000021315) polr2eb (ENSCCRG00000021273) Golden-line barbel MODERN SPECIES 156 ankrd29 (ENSSGRG00000000118) ENSSGRG00000000109 ENSSGRG00000000104 ENSSGRG00000053722 stx6 (ENSSGRG00000053720) ier5 (ENSSGRG00000053719) ENSSGRG00000053717 pdzk1ip1 (ENSSGRG00000053716) ENSSGRG00000053710 tm2d1 (ENSSGRG00000053709) RAB38 (ENSSGRG00000053708) nfia (ENSSGRG00000053621) ENSSGRG00000053611 nrd1b (ENSSGRG00000053551) nphs2 (ENSSGRG00000053542) tdrd5 (ENSSGRG00000053539) ##22 FAM163A (ENSSGRG00000053538) RABGAP1L (ENSSGRG00000053485) ENSSGRG00000053477 ENSSGRG00000053473 ENSSGRG00000053471 ENSSGRG00000053469 ENSSGRG00000053468 ENSSGRG00000053448 marchf2 (ENSSGRG00000053447) hnrnpm (ENSSGRG00000053445) PIP5K1C (ENSSGRG00000053251) gpx4a (ENSSGRG00000053249) polr2eb (ENSSGRG00000053248) ARHGAP45 (ENSSGRG00000053182) tjp3 (ENSSGRG00000053146) Goldfish DUPLICATION Goldfish MODERN SPECIES 14 ENSCARG00000004663 plekhb2 (ENSCARG00000004648) ENSCARG00000004636 stx6 (ENSCARG00000004618) ier5 (ENSCARG00000004612) tal1 (ENSCARG00000004607) ENSCARG00000004603 PATJ (ENSCARG00000004482) tm2d1 (ENSCARG00000004436) nfia (ENSCARG00000003945) frem1b (ENSCARG00000015099) ENSCARG00000015063 nrd1b (ENSCARG00000011749) axdnd1 (ENSCARG00000011591) nphs2 (ENSCARG00000011573) tdrd5 (ENSCARG00000011563) ##22 GPR52 (ENSCARG00000011555) RABGAP1L (ENSCARG00000011366) ENSCARG00000011340 ENSCARG00000011293 ENSCARG00000011257 ENSCARG00000011149 marchf2 (ENSCARG00000011138) hnrnpm (ENSCARG00000011102) ENSCARG00000010965 gpx4a (ENSCARG00000010945) polr2eb (ENSCARG00000010933) ARHGAP45 (ENSCARG00000007945) tjp3 (ENSCARG00000007843) SBNO2 (ENSCARG00000007703) hapln4 (ENSCARG00000007669) Goldfish MODERN SPECIES 14 ENSCARG00000014520 ENSCARG00000014515 pias4a (ENSCARG00000014501) ENSCARG00000014399 tcf3b (ENSCARG00000014281) UQCR11 (ENSCARG00000014267) ENSCARG00000014246 ENSCARG00000014235 frem1b (ENSCARG00000014102) ENSCARG00000014083 ENSCARG00000014079 ENSCARG00000014069 nrd1b (ENSCARG00000010174) axdnd1 (ENSCARG00000010026) nphs2 (ENSCARG00000010001) tdrd5 (ENSCARG00000009990) ##22 ENSCARG00000008654 ENSCARG00000008596 ENSCARG00000008556 ENSCARG00000008532 ENSCARG00000008493 marchf2 (ENSCARG00000008487) hnrnpm (ENSCARG00000008456) ENSCARG00000008392 ENSCARG00000008356 polr2eb (ENSCARG00000008336) ARHGAP45 (ENSCARG00000005840) tjp3 (ENSCARG00000005090) SBNO2 (ENSCARG00000004640) tm6sf2b (ENSCARG00000004588) hapln4 (ENSCARG00000004575) Cyprininae ANCESTRAL SPECIES 892 ENSGT00940000159943.f ENSGT01030000234614.B.b.f ENSGT00390000001360.r.b ##22 ENSGT00940000159228.b.a.b.b ENSGT00940000154611.ad.a.k.a ENSGT00940000163581.f.a.gb.a.b Cyprininae_a ANCESTRAL SPECIES 91 ENSGT00390000013989.a.b ENSGT00390000013003.e.a.a.b ENSGT00940000157639.o ENSGT00900000141021.a.b ENSGT00940000159889.b.b.e.a ENSGT01040000244250 ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.f ENSGT00390000001360.r.b ##22 ENSGT00940000159228.b.a.b.b ENSGT00940000154611.ad.a.k.a ENSGT00940000163422.c ENSGT00940000163581.f.a.gb.b.a.b ENSGT00940000163126.a.b.q ENSGT00940000158995.a.c ENSGT00940000154595.gb ENSGT00940000159258.d.f ENSGT00980000198641.b ENSGT00940000165680.A ENSGT00390000013841.hb.a ENSGT00950000183110.b.a.c.a ENSGT00940000160036.c ENSGT00940000159946.g.a ENSGT00390000012913.a.b.b Common carp reference MODERN SPECIES 43 trmt13 (ENSCCRG00000010354) OSBPL1A (ENSCCRG00000011939) ttc39c (ENSCCRG00000010716) ENSCCRG00000012160 ankrd29 (ENSCCRG00000066070) ENSCCRG00000081158 plekhb2 (ENSCCRG00000012221) ENSCCRG00000012223 stx6 (ENSCCRG00000068725) tal1 (ENSCCRG00000038628) PATJ (ENSCCRG00000006794) tm2d1 (ENSCCRG00000069940) nfia (ENSCCRG00000006812) atpaf1 (ENSCCRG00000056526) nphs2 (ENSCCRG00000027287) tdrd5 (ENSCCRG00000008348) ##22 ENSCCRG00000021988 ENSCCRG00000015467 ENSCCRG00000015510 ENSCCRG00000007709 ENSCCRG00000007547 marchf2 (ENSCCRG00000079083) hnrnpm (ENSCCRG00000075767) ENSCCRG00000021333 ENSCCRG00000064766 polr2eb (ENSCCRG00000040281) ENSCCRG00000062798 tjp3 (ENSCCRG00000038766) ENSCCRG00000074076 tm6sf2b (ENSCCRG00000004269) hapln4 (ENSCCRG00000004276) Golden-line barbel MODERN SPECIES 266 nfia (ENSSGRG00000028874) frem1b (ENSSGRG00000028877) atpaf1 (ENSSGRG00000028878) ENSSGRG00000028880 ENSSGRG00000028881 nphs2 (ENSSGRG00000028882) tdrd5 (ENSSGRG00000028883) ##22 FAM163A (ENSSGRG00000028884) RABGAP1L (ENSSGRG00000028885) GPR52 (ENSSGRG00000029349) ENSSGRG00000029351 ENSSGRG00000029352 ENSSGRG00000029354 marchf2 (ENSSGRG00000029395) hnrnpm (ENSSGRG00000029399) PIP5K1C (ENSSGRG00000029403) gpx4a (ENSSGRG00000029454) polr2eb (ENSSGRG00000029455) tjp3 (ENSSGRG00000029490) SBNO2 (ENSSGRG00000029852) tm6sf2b (ENSSGRG00000029854) hapln4 (ENSSGRG00000029878) Zebrafish MODERN SPECIES 14 ENSDARG00000071458 stx6 (ENSDARG00000042742) ier5 (ENSDARG00000009881) tal1 (ENSDARG00000019930) pdzk1ip1 (ENSDARG00000017127) PATJ (ENSDARG00000024964) ENSDARG00000093333 tm2d1 (ENSDARG00000057042) nfia (ENSDARG00000062420) frem1b (ENSDARG00000062402) atpaf1 (ENSDARG00000042799) ENSDARG00000114797 nrd1b (ENSDARG00000062372) axdnd1 (ENSDARG00000062355) nphs2 (ENSDARG00000042850) tdrd5 (ENSDARG00000071450) ##22 fam163ab (ENSDARG00000093021) ENSDARG00000061757 GPR52 (ENSDARG00000093460) ifi44f1 (ENSDARG00000071361) ENSDARG00000002293 ENSDARG00000094984 ifi44f4 (ENSDARG00000071355) ifi44f5 (ENSDARG00000094747) ENSDARG00000009673 rab11ba (ENSDARG00000041878) marchf2 (ENSDARG00000061738) hnrnpm (ENSDARG00000061735) ENSDARG00000076001 gpx4a (ENSDARG00000068478) polr2eb (ENSDARG00000026183) Spotted gar MODERN SPECIES 661 MRM1 (ENSLOCG00000004945) dhrs13a.2 (ENSLOCG00000004928) PHF12 (ENSLOCG00000004908) SEZ6 (ENSLOCG00000004892) pipox (ENSLOCG00000004870) MYO18A (ENSLOCG00000004837) ENSLOCG00000017437 #11 vezf1b (ENSLOCG00000004823) #12 cuedc1b (ENSLOCG00000004806) #13 lgals9l5 (ENSLOCG00000004795) #17 KSR1 (ENSLOCG00000004773) #15 wsb1 (ENSLOCG00000004758) #14 OMG (ENSLOCG00000004749) #19 ENSLOCG00000017436 #20 NF1 (ENSLOCG00000004716) ##18 akap1b (ENSLOCG00000004703) #22 msi2b (ENSLOCG00000004675) #23 mrps23 (ENSLOCG00000004663) gosr1 (ENSLOCG00000004641) ENSLOCG00000004627 AIPL1 (ENSLOCG00000004610) ENSLOCG00000004594 exo5 (ENSLOCG00000004581) rflnb (ENSLOCG00000004567) vps53 (ENSLOCG00000004547) aifm4 (ENSLOCG00000004526) tlcd2 (ENSLOCG00000004500) CCDC92B (ENSLOCG00000004486) cluha (ENSLOCG00000004458) pafah1b1b (ENSLOCG00000004448) mettl16 (ENSLOCG00000004429) Reedfish MODERN SPECIES 16 tmem248 (ENSECRG00000007133) rad51d (ENSECRG00000007059) ENSECRG00000007013 lig3 (ENSECRG00000006992) tmem132e (ENSECRG00000006966) ENSECRG00000006938 nlk2 (ENSECRG00000006920) #26 lyrm9 (ENSECRG00000006912) #25 nos2a (ENSECRG00000006882) #24 ENSECRG00000006854 #17 ENSECRG00000006838 #17 KSR1 (ENSECRG00000006778) #15 wsb1 (ENSECRG00000006725) #14 OMG (ENSECRG00000006693) #19 NF1 (ENSECRG00000006590) ##18 akap1b (ENSECRG00000006534) #22 msi2b (ENSECRG00000006519) ##23 mrps23 (ENSECRG00000006507) cuedc1b (ENSECRG00000006496) #13 vezf1b (ENSECRG00000006482) #12 ENSECRG00000006469 #11 ENSECRG00000006464 MYO18A (ENSECRG00000006417) pipox (ENSECRG00000006384) SEZ6 (ENSECRG00000006364) PHF12 (ENSECRG00000006324) dhrs13a.2 (ENSECRG00000006310) ENSECRG00000006301 lhx1a (ENSECRG00000006292) aatf (ENSECRG00000006282) acaca (ENSECRG00000006072)