Mus_B	ANCESTRAL SPECIES	10	ENSGT00530000064407.b.b.d.e.b.a #7	ENSGT00940000153805.q.a.a.a #8	ENSGT00940000153805.q.a.a.b.a.a.a #9	ENSGT00940000153805.q.a.a.b.a.b #10	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830 #13	ENSGT01030000234519.e.a.a.b.a.a.a #14	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d #21	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a.c.b #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00530000064407.b.b.d.e.b.a #7	ENSGT00940000153805.q.a.a.a #8	ENSGT00940000153805.q.a.a.b.a.a.a #9	ENSGT00940000153805.q.a.a.b.a.b #10	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830 #13	ENSGT01030000234519.e.a.a.b.a.a.a #14	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d #21	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a.c.b #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0016475 #7	Zfp873 (MGP_SPRETEiJ_G0016474) #8	MGP_SPRETEiJ_G0016473 #9	MGP_SPRETEiJ_G0016472 #10	Ankrd24 (MGP_SPRETEiJ_G0016471) #11	Sirt6 (MGP_SPRETEiJ_G0016470) #12	BC025920 (MGP_SPRETEiJ_G0016469) #13	Tle6 (MGP_SPRETEiJ_G0016468) #14	Tle2 (MGP_SPRETEiJ_G0016467) #15	Tle5 (MGP_SPRETEiJ_G0016466) #16	Gna11 (MGP_SPRETEiJ_G0016465) #17	Gna15 (MGP_SPRETEiJ_G0016464) #18	S1pr4 (MGP_SPRETEiJ_G0016463) #19	MGP_SPRETEiJ_G0016462 #20	Celf5 (MGP_SPRETEiJ_G0016461) #21	Nfic (MGP_SPRETEiJ_G0016460) #22	Smim24 (MGP_SPRETEiJ_G0016459) #23	Dohh (MGP_SPRETEiJ_G0016458) #24	Fzr1 (MGP_SPRETEiJ_G0016457) #25	Tektip1 (MGP_SPRETEiJ_G0016456) #26	Mfsd12 (MGP_SPRETEiJ_G0016455) #27	Hmg20b (MGP_SPRETEiJ_G0016454) #28	Gipc3 (MGP_SPRETEiJ_G0016453) #29	Tbxa2r (MGP_SPRETEiJ_G0016452) #30	Cactin (MGP_SPRETEiJ_G0016451) #31	Pip5k1c (MGP_SPRETEiJ_G0016450) #32	Tjp3 (MGP_SPRETEiJ_G0016449) #33	Apba3 (MGP_SPRETEiJ_G0016448) #34	Mrpl54 (MGP_SPRETEiJ_G0016447) #35	Matk (MGP_SPRETEiJ_G0016446) #36	Zfr2 (MGP_SPRETEiJ_G0016445) #37
Steppe mouse	MODERN SPECIES	2590											Gna11 (ENSMSIG00000023685) #17	Gna15 (ENSMSIG00000023707) #18	S1pr4 (ENSMSIG00000023728) #19	Ncln (ENSMSIG00000023731) #20	ENSMSIG00000023759	ENSMSIG00000023822 #22	Smim24 (ENSMSIG00000023837) #23	Gm48552 (ENSMSIG00000023854)	Dohh (ENSMSIG00000023865) #24	ENSMSIG00000023889 #25	Tektip1 (ENSMSIG00000023924) #26	Mfsd12 (ENSMSIG00000023928) #27	Hmg20b (ENSMSIG00000023944) #28	Gipc3 (ENSMSIG00000024007) #29	Tbxa2r (ENSMSIG00000024021) #30	Cactin (ENSMSIG00000024042) #31	Pip5k1c (ENSMSIG00000024074) #32	Tjp3 (ENSMSIG00000024242) #33	Apba3 (ENSMSIG00000024307) #34	ENSMSIG00000024325 #35	Matk (ENSMSIG00000024338) #36
Mouse	MODERN SPECIES	1	Gm4767 (ENSMUSG00000094076) ##8	Gm3055 (ENSMUSG00000094622) #7	Zfp433 (ENSMUSG00000096795) #9	Gm10778 (ENSMUSG00000096856) ##8	Ankrd24 (ENSMUSG00000054708) #11	Sirt6 (ENSMUSG00000034748) #12	BC025920 (ENSMUSG00000074862) #13	Tle6 (ENSMUSG00000034758) #14	Tle2 (ENSMUSG00000034771) #15	Tle5 (ENSMUSG00000054452) #16	Gna11 (ENSMUSG00000034781) #17	Gna15 (ENSMUSG00000034792) #18	S1pr4 (ENSMUSG00000044199) #19	Ncln (ENSMUSG00000020238) #20	Celf5 (ENSMUSG00000034818) #21	Nfic (ENSMUSG00000055053) #22	Smim24 (ENSMUSG00000078439) #23	Gm48552 (ENSMUSG00000114004)	Gm48551 (ENSMUSG00000113262)	Dohh (ENSMUSG00000078440) #24	Fzr1 (ENSMUSG00000020235) #25	Tektip1 (ENSMUSG00000020234) #26	Mfsd12 (ENSMUSG00000034854) #27	Hmg20b (ENSMUSG00000020232) #28	Gipc3 (ENSMUSG00000034872) #29	Tbxa2r (ENSMUSG00000034881) #30	Cactin (ENSMUSG00000034889) #31	Pip5k1c (ENSMUSG00000034902) #32	Tjp3 (ENSMUSG00000034917) #33	Apba3 (ENSMUSG00000004931) #34	Mrpl54 (ENSMUSG00000034932) #35