Mammalia	ANCESTRAL SPECIES	61	ENSGT00940000154587.a.b	ENSGT00940000159179	ENSGT00940000156470	ENSGT00940000162150	ENSGT00940000165800	ENSGT00940000155854	ENSGT00940000163280	ENSGT00940000158590	ENSGT00940000160463	ENSGT00950000183103.d.b	ENSGT00940000157036	ENSGT00390000018299	ENSGT00950000183005.b.d	ENSGT00940000162613	ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163917.b	ENSGT00940000160775 #36
Theria	ANCESTRAL SPECIES	41															ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163917.b	ENSGT00940000160775 #36
Eutheria	ANCESTRAL SPECIES	24						ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Glires	ANCESTRAL SPECIES	25	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #11	ENSGT01000000215054	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Muroidea	ANCESTRAL SPECIES	32	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #11	ENSGT01000000215054	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #11	ENSGT01000000215054	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237.eb ##11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36	ENSGT00940000162148 #37
Cricetinae	ANCESTRAL SPECIES	4						ENSGT00940000153805.q.a.a.a #9	ENSGT00940000159237.db.a #11	ENSGT00940000160088 #12	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36	ENSGT00940000162148 #37
Golden Hamster	MODERN SPECIES	764	ENSMAUG00000021079 #7	ENSMAUG00000000940 #8	ENSMAUG00000011554 #9	ENSMAUG00000009986 #10	ENSMAUG00000008197 #11	Sirt6 (ENSMAUG00000021546) #12	Tle6 (ENSMAUG00000010384) #13	ENSMAUG00000010830 #14	ENSMAUG00000013065 #15	Tle5 (ENSMAUG00000020765) #16	Gna11 (ENSMAUG00000004382) #17	Gna15 (ENSMAUG00000016578) #18	S1pr4 (ENSMAUG00000008594) #19	Ncln (ENSMAUG00000015425) #20	ENSMAUG00000020336 #21	Nfic (ENSMAUG00000018380) #22	Smim24 (ENSMAUG00000002297) #23	Dohh (ENSMAUG00000008351) #24	Fzr1 (ENSMAUG00000000921) #25	Tektip1 (ENSMAUG00000010716) #26	Mfsd12 (ENSMAUG00000009940) #27	Hmg20b (ENSMAUG00000020413) #28	Gipc3 (ENSMAUG00000021524) #29	Tbxa2r (ENSMAUG00000015276) #30	Cactin (ENSMAUG00000011643) #31	Pip5k1c (ENSMAUG00000014134) #32	Tjp3 (ENSMAUG00000010092) #33	Apba3 (ENSMAUG00000007859) #34	Mrpl54 (ENSMAUG00000009543) #35	Matk (ENSMAUG00000019712) #36	Zfr2 (ENSMAUG00000016438) #37
Chinese hamster chok1gshd	MODERN SPECIES	2	Ddx24 (ENSCGRG00001009522)	ENSCGRG00001004162	ENSCGRG00001000615 #7	ENSCGRG00001015466	ENSCGRG00001014612 #9	Ankrd24 (ENSCGRG00001010168) #11	Sirt6 (ENSCGRG00001001515) #12	Tle6 (ENSCGRG00001023857) #13	Tle2 (ENSCGRG00001015962) #15	Tle5 (ENSCGRG00001011131) #16	Gna11 (ENSCGRG00001021073) #17	Gna15 (ENSCGRG00001019244) #18	S1pr4 (ENSCGRG00001009743) #19	Ncln (ENSCGRG00001014212) #20	ENSCGRG00001002551 #21	Nfic (ENSCGRG00001015960) #22	Smim24 (ENSCGRG00001024709) #23	DOHH (ENSCGRG00001018617) #24	Fzr1 (ENSCGRG00001015616) #25	Tektip1 (ENSCGRG00001012954) #26	Mfsd12 (ENSCGRG00001018366) #27	Hmg20b (ENSCGRG00001016795) #28	Gipc3 (ENSCGRG00001016082) #29	Tbxa2r (ENSCGRG00001014446) #30	Cactin (ENSCGRG00001021287) #31	Pip5k1c (ENSCGRG00001017002) #32	Tjp3 (ENSCGRG00001001459) #33	Apba3 (ENSCGRG00001019836) #34	Mrpl54 (ENSCGRG00001019482) #35	Matk (ENSCGRG00001015278) #36	Zfr2 (ENSCGRG00001019870) #37
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237.eb ##11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36	ENSGT00940000162148 #37
Prairie vole	MODERN SPECIES	349	ENSMOCG00000007188	ENSMOCG00000006053	ENSMOCG00000012194	ENSMOCG00000017715 #9	ENSMOCG00000002022 #11	ENSMOCG00000016411	Sirt6 (ENSMOCG00000020031) #12	Tle6 (ENSMOCG00000021233) #13	Tle2 (ENSMOCG00000021122) #15	ENSMOCG00000020375 #16	Gna11 (ENSMOCG00000001264) #17	Gna15 (ENSMOCG00000007607) #18	S1pr4 (ENSMOCG00000001385) #19	Ncln (ENSMOCG00000010643) #20	ENSMOCG00000005573 #21	Nfic (ENSMOCG00000021133) #22	Smim24 (ENSMOCG00000012959) #23	Dohh (ENSMOCG00000014902) #24	Fzr1 (ENSMOCG00000012552) #25	Tektip1 (ENSMOCG00000017658) #26	Mfsd12 (ENSMOCG00000020987) #27	Hmg20b (ENSMOCG00000001874) #28	Gipc3 (ENSMOCG00000002475) #29	Tbxa2r (ENSMOCG00000005701) #30	Cactin (ENSMOCG00000011992) #31	Pip5k1c (ENSMOCG00000008488) #32	Tjp3 (ENSMOCG00000013578) #33	Apba3 (ENSMOCG00000015694) #34	Mrpl54 (ENSMOCG00000017895) #35	Matk (ENSMOCG00000001438) #36	Zfr2 (ENSMOCG00000010727) #37
Northern American deer mouse	MODERN SPECIES	14	ENSPEMG00000016925	ENSPEMG00000015235	ENSPEMG00000007616 ##9	Ankrd24 (ENSPEMG00000023820) ##11	Sirt6 (ENSPEMG00000030025) #12	ENSPEMG00000015555	Tle6 (ENSPEMG00000023765) #13	Tle2 (ENSPEMG00000023812) #15	Tle5 (ENSPEMG00000022384) #16	Gna11 (ENSPEMG00000020340) #17	Gna15 (ENSPEMG00000022124) #18	S1pr4 (ENSPEMG00000007107) #19	Ncln (ENSPEMG00000001818) #20	Celf5 (ENSPEMG00000021763)	ENSPEMG00000030211	Nfic (ENSPEMG00000022565) #22	ENSPEMG00000028186	Smim24 (ENSPEMG00000021225) #23	ENSPEMG00000014213 #24	Fzr1 (ENSPEMG00000020284) #25	Tektip1 (ENSPEMG00000029958) #26	Mfsd12 (ENSPEMG00000020766) #27	Hmg20b (ENSPEMG00000014935) #28	Gipc3 (ENSPEMG00000014161) #29	Tbxa2r (ENSPEMG00000015376) #30	Cactin (ENSPEMG00000021732) #31	Pip5k1c (ENSPEMG00000020543) #32	Tjp3 (ENSPEMG00000021396) #33	Apba3 (ENSPEMG00000021227) #34	Mrpl54 (ENSPEMG00000022929) #35	Matk (ENSPEMG00000020804) #36
Murinae	ANCESTRAL SPECIES	25	ENSGT00940000153805.q.a.a.b.a.a.a ##9	ENSGT00940000153805.q.a.a.b.a.b ##9	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b ##9	ENSGT00940000153805.q.a.a.b.b ##9	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Rat	MODERN SPECIES	17	Znf624l (ENSRNOG00000069034)	LOC100912294 (ENSRNOG00000066348) #9	LOC100909682 (ENSRNOG00000064149) ##9	LOC100912294 (ENSRNOG00000064426) ##9	LOC100125368 (ENSRNOG00000068608) ##9	Ankrd24 (ENSRNOG00000006759) #11	Sirt6 (ENSRNOG00000006393) #12	Tle6 (ENSRNOG00000006350) #13	Tle2 (ENSRNOG00000005874) #15	Tle5 (ENSRNOG00000052025) #16	Gna11 (ENSRNOG00000005446) #17	Gna15 (ENSRNOG00000005378) #18	S1pr4 (ENSRNOG00000005370) #19	Ncln (ENSRNOG00000004793) #20	Celf5 (ENSRNOG00000004695)	Nfic (ENSRNOG00000004505) #22	AC094643.2 (ENSRNOG00000053040)	Smim44 (ENSRNOG00000066999)	Dohh (ENSRNOG00000004259) #24	Fzr1 (ENSRNOG00000004169) #25	Tektip1 (ENSRNOG00000039861) #26	Mfsd12 (ENSRNOG00000039858) #27	Hmg20b (ENSRNOG00000020601) #28	Tbxa2r (ENSRNOG00000020585) #30	Cactin (ENSRNOG00000039852) #31	Pip5k1c (ENSRNOG00000020577) #32	Tjp3 (ENSRNOG00000020501) #33	Apba3 (ENSRNOG00000020466) #34	Mrpl54 (ENSRNOG00000020464) #35	Matk (ENSRNOG00000020431) #36	Zfr2 (ENSRNOG00000020416) #37
Mus	ANCESTRAL SPECIES	15	ENSGT00940000153805.q.a.a.b.a.a.b ##9	ENSGT00940000153805.q.a.a.a #9	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.b ##9	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Shrew mouse	MODERN SPECIES	22	MGP_PahariEiJ_G0031070 ##9	AU041133 (MGP_PahariEiJ_G0031069) ##9	MGP_PahariEiJ_G0031068 #9	MGP_PahariEiJ_G0031067 ##9	Ankrd24 (MGP_PahariEiJ_G0031066) #11	Sirt6 (MGP_PahariEiJ_G0031065) #12	MGP_PahariEiJ_G0031064	MGP_PahariEiJ_G0031063	Tle2 (MGP_PahariEiJ_G0031062) #15	Tle5 (MGP_PahariEiJ_G0031061) #16	Gna11 (MGP_PahariEiJ_G0031060) #17	Gna15 (MGP_PahariEiJ_G0031059) #18	S1pr4 (MGP_PahariEiJ_G0031058) #19	Ncln (MGP_PahariEiJ_G0031057) #20	Celf5 (MGP_PahariEiJ_G0031056)	Nfic (MGP_PahariEiJ_G0031055) #22	Smim24 (MGP_PahariEiJ_G0031054) #23	MGP_PahariEiJ_G0031053 #24	Fzr1 (MGP_PahariEiJ_G0031052) #25	Tektip1 (MGP_PahariEiJ_G0031051) #26	Mfsd12 (MGP_PahariEiJ_G0031050) #27	Hmg20b (MGP_PahariEiJ_G0031049) #28	Gipc3 (MGP_PahariEiJ_G0031048) #29	Tbxa2r (MGP_PahariEiJ_G0031047) #30	Cactin (MGP_PahariEiJ_G0031046) #31	Pip5k1c (MGP_PahariEiJ_G0031045) #32	Tjp3 (MGP_PahariEiJ_G0031044) #33	Apba3 (MGP_PahariEiJ_G0031043) #34	Mrpl54 (MGP_PahariEiJ_G0031042) #35	Matk (MGP_PahariEiJ_G0031041) #36	Zfr2 (MGP_PahariEiJ_G0031040) #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #9	ENSGT00940000153805.q.a.a.b.a.a.a ##9	ENSGT00940000153805.q.a.a.b.a.b ##9	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a.c.b #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015657	Zfp873 (MGP_CAROLIEiJ_G0015656) #9	MGP_CAROLIEiJ_G0015655 ##9	MGP_CAROLIEiJ_G0015654 ##9	Ankrd24 (MGP_CAROLIEiJ_G0015653) #11	Sirt6 (MGP_CAROLIEiJ_G0015652) #12	BC025920 (MGP_CAROLIEiJ_G0015651)	MGP_CAROLIEiJ_G0015650	Tle2 (MGP_CAROLIEiJ_G0015649) #15	Tle5 (MGP_CAROLIEiJ_G0015648) #16	Gna11 (MGP_CAROLIEiJ_G0015647) #17	Gna15 (MGP_CAROLIEiJ_G0015646) #18	S1pr4 (MGP_CAROLIEiJ_G0015645) #19	Ncln (MGP_CAROLIEiJ_G0015644) #20	Celf5 (MGP_CAROLIEiJ_G0015643)	Nfic (MGP_CAROLIEiJ_G0015642) #22	Smim24 (MGP_CAROLIEiJ_G0015641) #23	MGP_CAROLIEiJ_G0015640 #24	Fzr1 (MGP_CAROLIEiJ_G0015639) #25	Tektip1 (MGP_CAROLIEiJ_G0015638) #26	Mfsd12 (MGP_CAROLIEiJ_G0015637) #27	Hmg20b (MGP_CAROLIEiJ_G0015636) #28	Gipc3 (MGP_CAROLIEiJ_G0015635) #29	Tbxa2r (MGP_CAROLIEiJ_G0015634) #30	Cactin (MGP_CAROLIEiJ_G0015633) #31	Pip5k1c (MGP_CAROLIEiJ_G0015632) #32	Tjp3 (MGP_CAROLIEiJ_G0015631) #33	Apba3 (MGP_CAROLIEiJ_G0015630) #34	Mrpl54 (MGP_CAROLIEiJ_G0015629) #35	Matk (MGP_CAROLIEiJ_G0015628) #36	Zfr2 (MGP_CAROLIEiJ_G0015627) #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #9	ENSGT00940000153805.q.a.a.b.a.a.a ##9	ENSGT00940000153805.q.a.a.b.a.b ##9	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a.c.b #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
Mouse	MODERN SPECIES	1	Gm4767 (ENSMUSG00000094076) ##9	Gm3055 (ENSMUSG00000094622)	Zfp433 (ENSMUSG00000096795) ##9	Gm10778 (ENSMUSG00000096856) ##9	Ankrd24 (ENSMUSG00000054708) #11	Sirt6 (ENSMUSG00000034748) #12	BC025920 (ENSMUSG00000074862)	Tle6 (ENSMUSG00000034758) #13	Tle2 (ENSMUSG00000034771) #15	Tle5 (ENSMUSG00000054452) #16	Gna11 (ENSMUSG00000034781) #17	Gna15 (ENSMUSG00000034792) #18	S1pr4 (ENSMUSG00000044199) #19	Ncln (ENSMUSG00000020238) #20	Celf5 (ENSMUSG00000034818)	Nfic (ENSMUSG00000055053) #22	Smim24 (ENSMUSG00000078439) #23	Gm48552 (ENSMUSG00000114004)	Gm48551 (ENSMUSG00000113262)	Dohh (ENSMUSG00000078440) #24	Fzr1 (ENSMUSG00000020235) #25	Tektip1 (ENSMUSG00000020234) #26	Mfsd12 (ENSMUSG00000034854) #27	Hmg20b (ENSMUSG00000020232) #28	Gipc3 (ENSMUSG00000034872) #29	Tbxa2r (ENSMUSG00000034881) #30	Cactin (ENSMUSG00000034889) #31	Pip5k1c (ENSMUSG00000034902) #32	Tjp3 (ENSMUSG00000034917) #33	Apba3 (ENSMUSG00000004931) #34	Mrpl54 (ENSMUSG00000034932) #35
Mus_C	ANCESTRAL SPECIES	7	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #9	ENSGT00940000153805.q.a.a.b.a.a.a ##9	ENSGT00940000153805.q.a.a.b.a.b ##9	ENSGT00940000159237 #11	ENSGT00940000160088 #12	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a.c.b #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000160775 #36
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0016475	Zfp873 (MGP_SPRETEiJ_G0016474) #9	MGP_SPRETEiJ_G0016473 ##9	MGP_SPRETEiJ_G0016472 ##9	Ankrd24 (MGP_SPRETEiJ_G0016471) #11	Sirt6 (MGP_SPRETEiJ_G0016470) #12	BC025920 (MGP_SPRETEiJ_G0016469)	Tle6 (MGP_SPRETEiJ_G0016468) #13	Tle2 (MGP_SPRETEiJ_G0016467) #15	Tle5 (MGP_SPRETEiJ_G0016466) #16	Gna11 (MGP_SPRETEiJ_G0016465) #17	Gna15 (MGP_SPRETEiJ_G0016464) #18	S1pr4 (MGP_SPRETEiJ_G0016463) #19	MGP_SPRETEiJ_G0016462 #20	Celf5 (MGP_SPRETEiJ_G0016461)	Nfic (MGP_SPRETEiJ_G0016460) #22	Smim24 (MGP_SPRETEiJ_G0016459) #23	Dohh (MGP_SPRETEiJ_G0016458) #24	Fzr1 (MGP_SPRETEiJ_G0016457) #25	Tektip1 (MGP_SPRETEiJ_G0016456) #26	Mfsd12 (MGP_SPRETEiJ_G0016455) #27	Hmg20b (MGP_SPRETEiJ_G0016454) #28	Gipc3 (MGP_SPRETEiJ_G0016453) #29	Tbxa2r (MGP_SPRETEiJ_G0016452) #30	Cactin (MGP_SPRETEiJ_G0016451) #31	Pip5k1c (MGP_SPRETEiJ_G0016450) #32	Tjp3 (MGP_SPRETEiJ_G0016449) #33	Apba3 (MGP_SPRETEiJ_G0016448) #34	Mrpl54 (MGP_SPRETEiJ_G0016447) #35	Matk (MGP_SPRETEiJ_G0016446) #36	Zfr2 (MGP_SPRETEiJ_G0016445) #37
Steppe mouse	MODERN SPECIES	2590											Gna11 (ENSMSIG00000023685) #17	Gna15 (ENSMSIG00000023707) #18	S1pr4 (ENSMSIG00000023728) #19	Ncln (ENSMSIG00000023731) #20	ENSMSIG00000023759 #21	ENSMSIG00000023822 #22	Smim24 (ENSMSIG00000023837) #23	Gm48552 (ENSMSIG00000023854)	Dohh (ENSMSIG00000023865) #24	ENSMSIG00000023889 #25	Tektip1 (ENSMSIG00000023924) #26	Mfsd12 (ENSMSIG00000023928) #27	Hmg20b (ENSMSIG00000023944) #28	Gipc3 (ENSMSIG00000024007) #29	Tbxa2r (ENSMSIG00000024021) #30	Cactin (ENSMSIG00000024042) #31	Pip5k1c (ENSMSIG00000024074) #32	Tjp3 (ENSMSIG00000024242) #33	Apba3 (ENSMSIG00000024307) #34	ENSMSIG00000024325 #35	Matk (ENSMSIG00000024338) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Shd (ENSNGAG00000003012)	Yju2 (ENSNGAG00000019627)	Ebi3 (ENSNGAG00000023241)	ENSNGAG00000019241 #11	ENSNGAG00000014424	Sirt6 (ENSNGAG00000022728) #12	ENSNGAG00000022046 #13	ENSNGAG00000009655 #15	ENSNGAG00000019164 #15	Tle5 (ENSNGAG00000023222) #16	Gna11 (ENSNGAG00000018151) #17	Gna15 (ENSNGAG00000022090) #18	S1pr4 (ENSNGAG00000014520) #19	Ncln (ENSNGAG00000023405) #20	ENSNGAG00000019694	Nfic (ENSNGAG00000021483) #22	Smim24 (ENSNGAG00000020934) #23	Dohh (ENSNGAG00000023202) #24	Fzr1 (ENSNGAG00000019979) #25	Mfsd12 (ENSNGAG00000021286) #27	Hmg20b (ENSNGAG00000022055) #28	Gipc3 (ENSNGAG00000022438) #29	Tbxa2r (ENSNGAG00000023199) #30	Cactin (ENSNGAG00000020699) #31	Pip5k1c (ENSNGAG00000021521) #32	Tjp3 (ENSNGAG00000001234) #33	Apba3 (ENSNGAG00000022342) #34	Mrpl54 (ENSNGAG00000021044) #35	Matk (ENSNGAG00000021707) #36	Zfr2 (ENSNGAG00000021831) #37	Atcay (ENSNGAG00000022622)
Lesser Egyptian jerboa	MODERN SPECIES	55	Stap2 (ENSJJAG00000019818)	Fsd1 (ENSJJAG00000012326)	Shd (ENSJJAG00000022632)	Yju2 (ENSJJAG00000023448)	Ebi3 (ENSJJAG00000012268)	ENSJJAG00000011418 #11	Sirt6 (ENSJJAG00000016800) #12	ENSJJAG00000012399 #15	ENSJJAG00000023070 #15	Tle5 (ENSJJAG00000015784) #16	Gna11 (ENSJJAG00000018855) #17	Gna15 (ENSJJAG00000013894) #18	S1pr4 (ENSJJAG00000000603) #19	Ncln (ENSJJAG00000004276) #20	ENSJJAG00000006902 #21	Nfic (ENSJJAG00000014906) #22	Smim24 (ENSJJAG00000001987) #23	Dohh (ENSJJAG00000023778) #24	Fzr1 (ENSJJAG00000007462) #25	ENSJJAG00000014542 #26	Mfsd12 (ENSJJAG00000023170) #27	Hmg20b (ENSJJAG00000014863) #28	Tbxa2r (ENSJJAG00000015378) #30	Cactin (ENSJJAG00000021015) #31	Pip5k1c (ENSJJAG00000014211) #32	Tjp3 (ENSJJAG00000020883) #33	Apba3 (ENSJJAG00000013868) #34	Mrpl54 (ENSJJAG00000020405) #35	Matk (ENSJJAG00000017018) #36	Zfr2 (ENSJJAG00000014635) #37	Atcay (ENSJJAG00000007757)
Kangaroo rat	MODERN SPECIES	383	Timm13 (ENSDORG00000015661)	Lmnb2 (ENSDORG00000002602)	Gadd45b (ENSDORG00000025421)	Gng7 (ENSDORG00000001766)	Diras1 (ENSDORG00000006599)	Slc39a3 (ENSDORG00000029412)	Sgta (ENSDORG00000009907)	Thop1 (ENSDORG00000008967)	ENSDORG00000025434 #15	Tle5 (ENSDORG00000029584) #16	Gna11 (ENSDORG00000025425) #17	Gna15 (ENSDORG00000008491) #18	S1pr4 (ENSDORG00000029034) #19	Ncln (ENSDORG00000009779) #20	ENSDORG00000005915	Nfic (ENSDORG00000002466) #22	Smim24 (ENSDORG00000028789) #23	ENSDORG00000024291	Fzr1 (ENSDORG00000012595) #25	ENSDORG00000012596 #26	Mfsd12 (ENSDORG00000012597) #27	ENSDORG00000030007 #28	Gipc3 (ENSDORG00000027124) #29	Tbxa2r (ENSDORG00000004093) #30	Cactin (ENSDORG00000004095) #31	Pip5k1c (ENSDORG00000004096) #32	Tjp3 (ENSDORG00000009449) #33	Apba3 (ENSDORG00000005324) #34	Mrpl54 (ENSDORG00000005326) #35	Matk (ENSDORG00000005330) #36	ENSDORG00000009741 #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00950000183102.A.a #31	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #29	ENSGT00940000161213 #28	ENSGT00390000005318.a #27	ENSGT00390000004282 #26	ENSGT00950000183104.B.a.a #25	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000038150	ENSHGLG00000046105	ENSHGLG00000040749	ENSHGLG00000048735	ENSHGLG00000034788	ENSHGLG00000040549	VN1R1 (ENSHGLG00000046402)	ENSHGLG00000050038	ENSHGLG00000042270	ENSHGLG00000035103	ENSHGLG00000050380	ENSHGLG00000006148	ENSHGLG00000050429	ENSHGLG00000006886	ENSHGLG00000046649	ENSHGLG00000005850 #22	ENSHGLG00000041401	ENSHGLG00000036870 #23	SMIM44 (ENSHGLG00000040448)	DOHH (ENSHGLG00000039512) #24	ENSHGLG00000019144	ENSHGLG00000040783	SGTA (ENSHGLG00000018547)	SLC39A3 (ENSHGLG00000033652)	DIRAS1 (ENSHGLG00000013381)	GNG7 (ENSHGLG00000017287)	GADD45B (ENSHGLG00000044805)	ENSHGLG00000015025	DAPK3 (ENSHGLG00000009769)	ENSHGLG00000007881	PIAS4 (ENSHGLG00000006172)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000159258 #32	ENSGT00950000183102.A.a #31	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #29	ENSGT00940000161213 #28	ENSGT00390000005318.a #27	ENSGT00390000004282 #26	ENSGT00950000183104.B.a.a #25	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a	ENSGT00940000159261
Guinea pig	MODERN SPECIES	395																ENSCPOG00000034808 #22
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00950000183102.A.a #31	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #29	ENSGT00940000161213 #28	ENSGT00390000005318.a #27	ENSGT00390000004282 #26	ENSGT00950000183104.B.a.a #25	ENSGT00950000182965.b.fb	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a	ENSGT00940000159261
Long-tailed chinchilla	MODERN SPECIES	202	CACTIN (ENSCLAG00000010714) #31	TBXA2R (ENSCLAG00000010610) #30	GIPC3 (ENSCLAG00000009638) #29	HMG20B (ENSCLAG00000012030) #28	MFSD12 (ENSCLAG00000008160) #27	TEKTIP1 (ENSCLAG00000009360) #26	FZR1 (ENSCLAG00000014081) #25	ENSCLAG00000014106	TLE2 (ENSCLAG00000007966) #15	TLE5 (ENSCLAG00000015307) #16	GNA11 (ENSCLAG00000010957) #17	GNA15 (ENSCLAG00000009774) #18	S1PR4 (ENSCLAG00000017878) #19	NCLN (ENSCLAG00000008645) #20	CELF5 (ENSCLAG00000009940)	NFIC (ENSCLAG00000007526) #22	SMIM24 (ENSCLAG00000007177) #23	DOHH (ENSCLAG00000007817) #24	THOP1 (ENSCLAG00000015063)	SGTA (ENSCLAG00000010647)	DIRAS1 (ENSCLAG00000017925)	GNG7 (ENSCLAG00000009115)	GADD45B (ENSCLAG00000008923)	LMNB2 (ENSCLAG00000007920)	DAPK3 (ENSCLAG00000009010)	EEF2 (ENSCLAG00000014112)	PIAS4 (ENSCLAG00000014404)	ZBTB7A (ENSCLAG00000012947)	MAP2K2 (ENSCLAG00000011717)	CREB3L3 (ENSCLAG00000011297)	SIRT6 (ENSCLAG00000008888) #12
Degu	MODERN SPECIES	91	TBXA2R (ENSODEG00000013384) #30	GIPC3 (ENSODEG00000013296) #29	HMG20B (ENSODEG00000014653) #28	MFSD12 (ENSODEG00000014260) #27	TEKTIP1 (ENSODEG00000013282) #26	FZR1 (ENSODEG00000014514) #25	ENSODEG00000013786	TLE2 (ENSODEG00000014073) #15	ENSODEG00000014482 #16	ENSODEG00000020164	GNA11 (ENSODEG00000015009) #17	GNA15 (ENSODEG00000014085) #18	S1PR4 (ENSODEG00000020319) #19	NCLN (ENSODEG00000013853) #20	CELF5 (ENSODEG00000014460)	NFIC (ENSODEG00000015267) #22	ENSODEG00000015846 #23	DOHH (ENSODEG00000014181) #24	ENSODEG00000013996	THOP1 (ENSODEG00000013736)	SGTA (ENSODEG00000014332)	SLC39A3 (ENSODEG00000014274)	DIRAS1 (ENSODEG00000020412)	GNG7 (ENSODEG00000014141)	GADD45B (ENSODEG00000014386)	ENSODEG00000014763	DAPK3 (ENSODEG00000014160)	ENSODEG00000014175	PIAS4 (ENSODEG00000015061)	ZBTB7A (ENSODEG00000014027)	MAP2K2 (ENSODEG00000014670)
Sciuridae	ANCESTRAL SPECIES	23	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005022148	GNG7 (ENSSVLG00005022168)	SLC39A3 (ENSSVLG00005022209)	SGTA (ENSSVLG00005022255)	THOP1 (ENSSVLG00005022285)	ZNF556 (ENSSVLG00005022445)	ZNF77 (ENSSVLG00005022489)	ENSSVLG00005022518 #13	TLE2 (ENSSVLG00005022632) #15	TLE5 (ENSSVLG00005022954) #16	GNA11 (ENSSVLG00005023021) #17	GNA15 (ENSSVLG00005023052) #18	S1PR4 (ENSSVLG00005023097) #19	NCLN (ENSSVLG00005023124) #20	CELF5 (ENSSVLG00005023165)	NFIC (ENSSVLG00005023336) #22	ENSSVLG00005023514	DOHH (ENSSVLG00005023586) #24	FZR1 (ENSSVLG00005023633) #25	TEKTIP1 (ENSSVLG00005023668) #26	MFSD12 (ENSSVLG00005023702) #27	HMG20B (ENSSVLG00005023762) #28	GIPC3 (ENSSVLG00005023804) #29	TBXA2R (ENSSVLG00005023817) #30	CACTIN (ENSSVLG00005023836) #31	PIP5K1C (ENSSVLG00005023887) #32	TJP3 (ENSSVLG00005023962) #33	MRPL54 (ENSSVLG00005024184) #35	RAX2 (ENSSVLG00005024207)	MATK (ENSSVLG00005024229) #36	ZFR2 (ENSSVLG00005024341) #37
Marmotini	ANCESTRAL SPECIES	24	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Squirrel	MODERN SPECIES	188	LMNB2 (ENSSTOG00000027596)	GADD45B (ENSSTOG00000027321)	GNG7 (ENSSTOG00000029016)	DIRAS1 (ENSSTOG00000032129)	SLC39A3 (ENSSTOG00000008404)	SGTA (ENSSTOG00000013262)	THOP1 (ENSSTOG00000006054)	ZNF77 (ENSSTOG00000034105)	TLE2 (ENSSTOG00000011134) #15	TLE5 (ENSSTOG00000028243) #16	GNA11 (ENSSTOG00000019951) #17	GNA15 (ENSSTOG00000021930) #18	S1PR4 (ENSSTOG00000024766) #19	NCLN (ENSSTOG00000022427) #20	CELF5 (ENSSTOG00000002384)	NFIC (ENSSTOG00000024218) #22	SMIM24 (ENSSTOG00000030174) #23	DOHH (ENSSTOG00000023074) #24	FZR1 (ENSSTOG00000002807) #25	TEKTIP1 (ENSSTOG00000026760) #26	MFSD12 (ENSSTOG00000002823) #27	HMG20B (ENSSTOG00000022314) #28	GIPC3 (ENSSTOG00000007215) #29	TBXA2R (ENSSTOG00000028290) #30	CACTIN (ENSSTOG00000001235) #31	PIP5K1C (ENSSTOG00000023021) #32	TJP3 (ENSSTOG00000024962) #33	APBA3 (ENSSTOG00000000352) #34	MRPL54 (ENSSTOG00000022378) #35	RAX2 (ENSSTOG00000024315)	MATK (ENSSTOG00000011892) #36
Arctic ground squirrel	MODERN SPECIES	301							ZNF77 (ENSUPAG00010008190)	ENSUPAG00010008199 #13	TLE2 (ENSUPAG00010008216) #15	TLE5 (ENSUPAG00010008263) #16	GNA11 (ENSUPAG00010008291) #17	GNA15 (ENSUPAG00010008318) #18	S1PR4 (ENSUPAG00010008324) #19	NCLN (ENSUPAG00010008331) #20	ENSUPAG00010008374 #21	NFIC (ENSUPAG00010008410) #22	ENSUPAG00010008444 #23	SMIM44 (ENSUPAG00010008452)	DOHH (ENSUPAG00010008461) #24	FZR1 (ENSUPAG00010008472) #25	TEKTIP1 (ENSUPAG00010008492) #26	MFSD12 (ENSUPAG00010008498) #27	HMG20B (ENSUPAG00010008513) #28	GIPC3 (ENSUPAG00010008525) #29	TBXA2R (ENSUPAG00010008535) #30	CACTIN (ENSUPAG00010008542) #31	PIP5K1C (ENSUPAG00010008552) #32	TJP3 (ENSUPAG00010008756) #33	APBA3 (ENSUPAG00010008831) #34	MRPL54 (ENSUPAG00010008838) #35	RAX2 (ENSUPAG00010008848)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000182916.a.a #22
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	691															ENSOCUG00000030396	ENSOCUG00000033865 #22
Rabbit	MODERN SPECIES	846																ENSOCUG00000037704 #22	ENSOCUG00000025520
Rabbit	MODERN SPECIES	603													ENSOCUG00000038995	ENSOCUG00000038062	ENSOCUG00000032969	ENSOCUG00000038344 #22
Primates	ANCESTRAL SPECIES	18	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00950000183102.A.a #31	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #29	ENSGT00940000161213 #28	ENSGT00390000005318.a #27	ENSGT00390000004282 #26	ENSGT00950000183104.B.a.a #25	ENSGT00500000044957 #24	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.g #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00390000003403	ENSGT00940000162830	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Coquerels sifaka	MODERN SPECIES	348	CACTIN (ENSPCOG00000015989) #31	TBXA2R (ENSPCOG00000015698) #30	GIPC3 (ENSPCOG00000000061) #29	HMG20B (ENSPCOG00000013810) #28	MFSD12 (ENSPCOG00000023032) #27	TEKTIP1 (ENSPCOG00000017742) #26	FZR1 (ENSPCOG00000020160) #25	DOHH (ENSPCOG00000002793) #24	TLE6 (ENSPCOG00000027942) #13	TLE2 (ENSPCOG00000028201) #15	ENSPCOG00000017438 #16	GNA11 (ENSPCOG00000024506) #17	GNA15 (ENSPCOG00000013834) #18	NCLN (ENSPCOG00000024560) #20	CELF5 (ENSPCOG00000011528)	NFIC (ENSPCOG00000027301) #22	SMIM44 (ENSPCOG00000024749)	ZNF77 (ENSPCOG00000024746)	ZNF57 (ENSPCOG00000018829)	ENSPCOG00000020343	ZNF555 (ENSPCOG00000022329)	ZNF554 (ENSPCOG00000002531)	THOP1 (ENSPCOG00000025936)	SGTA (ENSPCOG00000022419)	SLC39A3 (ENSPCOG00000019953)	DIRAS1 (ENSPCOG00000001011)	GNG7 (ENSPCOG00000028462)	GADD45B (ENSPCOG00000013278)	LMNB2 (ENSPCOG00000028250)	TIMM13 (ENSPCOG00000023149)	TMPRSS9 (ENSPCOG00000023380)
Greater bamboo lemur	MODERN SPECIES	353												ENSPSMG00000009779 #18	NCLN (ENSPSMG00000009764) #20	ENSPSMG00000009709	ENSPSMG00000009706	NFIC (ENSPSMG00000009446) #22	SMIM24 (ENSPSMG00000009212) #23	ZNF77 (ENSPSMG00000009202)	ENSPSMG00000009195	ZNF556 (ENSPSMG00000009193)	ZNF555 (ENSPSMG00000009189)	ENSPSMG00000009186	THOP1 (ENSPSMG00000009163)	SGTA (ENSPSMG00000009116)	SLC39A3 (ENSPSMG00000009070)	DIRAS1 (ENSPSMG00000009057)	GNG7 (ENSPSMG00000009045)	GADD45B (ENSPSMG00000009032)	LMNB2 (ENSPSMG00000009012)	TIMM13 (ENSPSMG00000008997)	TMPRSS9 (ENSPSMG00000008966)
Mouse lemur	MODERN SPECIES	16	DIRAS1 (ENSMICG00000013418)	SLC39A3 (ENSMICG00000031825)	SGTA (ENSMICG00000013433)	THOP1 (ENSMICG00000031728)	ZNF554 (ENSMICG00000030632)	ZNF555 (ENSMICG00000001516)	ZNF556 (ENSMICG00000043985)	ZNF77 (ENSMICG00000044639)	TLE6 (ENSMICG00000003016) #13	TLE2 (ENSMICG00000003029) #15	ENSMICG00000027776 #16	GNA11 (ENSMICG00000032000) #17	GNA15 (ENSMICG00000002977) #18	NCLN (ENSMICG00000007457) #20	CELF5 (ENSMICG00000003506)	NFIC (ENSMICG00000006236) #22	SMIM24 (ENSMICG00000043267) #23	SMIM44 (ENSMICG00000044026)	DOHH (ENSMICG00000044244) #24	FZR1 (ENSMICG00000015945) #25	TEKTIP1 (ENSMICG00000043061) #26	MFSD12 (ENSMICG00000026672) #27	HMG20B (ENSMICG00000028142) #28	GIPC3 (ENSMICG00000012665) #29	TBXA2R (ENSMICG00000031426) #30	CACTIN (ENSMICG00000008291) #31	PIP5K1C (ENSMICG00000028246) #32	TJP3 (ENSMICG00000014731) #33	APBA3 (ENSMICG00000014756) #34	MRPL54 (ENSMICG00000034581) #35	RAX2 (ENSMICG00000014768)
Bushbaby	MODERN SPECIES	144	GNG7 (ENSOGAG00000027288)	DIRAS1 (ENSOGAG00000000372)	SLC39A3 (ENSOGAG00000025858)	SGTA (ENSOGAG00000000374)	THOP1 (ENSOGAG00000000375)	ZNF555 (ENSOGAG00000000383)	ENSOGAG00000002111	ENSOGAG00000032033 #13	TLE2 (ENSOGAG00000016146) #15	TLE5 (ENSOGAG00000016151) #16	GNA11 (ENSOGAG00000016154) #17	GNA15 (ENSOGAG00000026139) #18	S1PR4 (ENSOGAG00000032004) #19	NCLN (ENSOGAG00000009302) #20	CELF5 (ENSOGAG00000014161)	NFIC (ENSOGAG00000026321) #22	SMIM24 (ENSOGAG00000027356) #23	DOHH (ENSOGAG00000006502) #24	FZR1 (ENSOGAG00000014162) #25	MFSD12 (ENSOGAG00000014168) #27	HMG20B (ENSOGAG00000014171) #28	GIPC3 (ENSOGAG00000014175) #29	TBXA2R (ENSOGAG00000026948) #30	CACTIN (ENSOGAG00000010382) #31	PIP5K1C (ENSOGAG00000010393) #32	TJP3 (ENSOGAG00000017146) #33	APBA3 (ENSOGAG00000017147) #34	ENSOGAG00000033519 #35	RAX2 (ENSOGAG00000010138)	MATK (ENSOGAG00000004396) #36	ZFR2 (ENSOGAG00000017150) #37
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213.u.a #28	ENSGT00940000161213.u.b #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213.u.a #28	ENSGT00940000161213.u.b #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213.u.a #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Bolivian squirrel monkey	MODERN SPECIES	150	ENSSBOG00000021127	SGTA (ENSSBOG00000032411)	THOP1 (ENSSBOG00000035328)	ZNF554 (ENSSBOG00000031736)	ZNF555 (ENSSBOG00000013346)	ENSSBOG00000018429	ZNF77 (ENSSBOG00000022293)	TLE6 (ENSSBOG00000034568) #13	TLE2 (ENSSBOG00000029407) #15	TLE5 (ENSSBOG00000022171) #16	ENSSBOG00000011100	GNA11 (ENSSBOG00000017439) #17	GNA15 (ENSSBOG00000031168) #18	NCLN (ENSSBOG00000027521) #20	ENSSBOG00000036241	NFIC (ENSSBOG00000031869) #22	SMIM24 (ENSSBOG00000019949) #23	SMIM44 (ENSSBOG00000025422)	DOHH (ENSSBOG00000021498) #24	FZR1 (ENSSBOG00000023681) #25	TEKTIP1 (ENSSBOG00000020851) #26	MFSD12 (ENSSBOG00000022502) #27	HMG20B (ENSSBOG00000034086) #28	GIPC3 (ENSSBOG00000021391) #29	CACTIN (ENSSBOG00000034076) #31	PIP5K1C (ENSSBOG00000027787) #32	TJP3 (ENSSBOG00000035488) #33	APBA3 (ENSSBOG00000030975) #34	MRPL54 (ENSSBOG00000028081) #35	MATK (ENSSBOG00000030884) #36	ATCAY (ENSSBOG00000031021)
Capuchin	MODERN SPECIES	375	SLC39A3 (ENSCCAG00000022362)	SGTA (ENSCCAG00000023345)	THOP1 (ENSCCAG00000011844)	ZNF554 (ENSCCAG00000031592)	ZNF556 (ENSCCAG00000003367)	ZNF57 (ENSCCAG00000026905)	ZNF77 (ENSCCAG00000017871)	TLE6 (ENSCCAG00000035104) #13	TLE2 (ENSCCAG00000031140) #15	TLE5 (ENSCCAG00000037181) #16	GNA11 (ENSCCAG00000022709) #17	GNA15 (ENSCCAG00000028488) #18	S1PR4 (ENSCCAG00000019353) #19	NCLN (ENSCCAG00000034927) #20	ENSCCAG00000028950	NFIC (ENSCCAG00000035238) #22	SMIM24 (ENSCCAG00000032618) #23	SMIM44 (ENSCCAG00000024174)	DOHH (ENSCCAG00000018512) #24	ENSCCAG00000025603	FZR1 (ENSCCAG00000031294) #25	C19orf71 (ENSCCAG00000028895) #26	MFSD12 (ENSCCAG00000021716) #27	HMG20B (ENSCCAG00000020130) #28	GIPC3 (ENSCCAG00000035399) #29	TBXA2R (ENSCCAG00000028722) #30	CACTIN (ENSCCAG00000028723) #31	PIP5K1C (ENSCCAG00000019560) #32	TJP3 (ENSCCAG00000020120) #33	APBA3 (ENSCCAG00000033704) #34	MRPL54 (ENSCCAG00000000138) #35
Mas night monkey	MODERN SPECIES	937	ENSANAG00000029903	DIRAS1 (ENSANAG00000010669)	SLC39A3 (ENSANAG00000036219)	ENSANAG00000029667	THOP1 (ENSANAG00000033301)	ZNF554 (ENSANAG00000033835)	ZNF57 (ENSANAG00000034416)	ZNF77 (ENSANAG00000012552)	TLE6 (ENSANAG00000025865) #13	TLE2 (ENSANAG00000028611) #15	GNA11 (ENSANAG00000033019) #17	GNA15 (ENSANAG00000029456) #18	S1PR4 (ENSANAG00000010374) #19	NCLN (ENSANAG00000036906) #20	CELF5 (ENSANAG00000024549)	NFIC (ENSANAG00000036415) #22	ENSANAG00000027655	SMIM44 (ENSANAG00000014595)	DOHH (ENSANAG00000036531) #24	FZR1 (ENSANAG00000028463) #25	TEKTIP1 (ENSANAG00000033612) #26	MFSD12 (ENSANAG00000037281) #27	HMG20B (ENSANAG00000020667) #28	TBXA2R (ENSANAG00000009361) #30	CACTIN (ENSANAG00000034680) #31	PIP5K1C (ENSANAG00000036860) #32	TJP3 (ENSANAG00000028837) #33	APBA3 (ENSANAG00000034636) #34	MRPL54 (ENSANAG00000028692) #35	RAX2 (ENSANAG00000029699)	MATK (ENSANAG00000036207) #36
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b.a.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Macaca	ANCESTRAL SPECIES	24	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b.a.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Pig-tailed macaque	MODERN SPECIES	76	ENSMNEG00000041965	SLC39A3 (ENSMNEG00000028479)	SGTA (ENSMNEG00000027965)	THOP1 (ENSMNEG00000026622)	ZNF554 (ENSMNEG00000035698)	ZNF555 (ENSMNEG00000031744)	ZNF77 (ENSMNEG00000039599)	TLE6 (ENSMNEG00000032520) #13	TLE2 (ENSMNEG00000036907) #15	TLE5 (ENSMNEG00000013087) #16	GNA11 (ENSMNEG00000045417) #17	GNA15 (ENSMNEG00000041090) #18	S1PR4 (ENSMNEG00000020638) #19	NCLN (ENSMNEG00000036405) #20	ENSMNEG00000001853 #21	NFIC (ENSMNEG00000042199) #22	SMIM24 (ENSMNEG00000038502) #23	SMIM44 (ENSMNEG00000032843)	DOHH (ENSMNEG00000040585) #24	FZR1 (ENSMNEG00000028728) #25	TEKTIP1 (ENSMNEG00000031534) #26	MFSD12 (ENSMNEG00000036659) #27	HMG20B (ENSMNEG00000037721) #28	GIPC3 (ENSMNEG00000033247) #29	TBXA2R (ENSMNEG00000029210) #30	CACTIN (ENSMNEG00000038257) #31	PIP5K1C (ENSMNEG00000023721) #32	TJP3 (ENSMNEG00000029063) #33	APBA3 (ENSMNEG00000028714) #34	MRPL54 (ENSMNEG00000039499) #35	RAX2 (ENSMNEG00000034075)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT01100000263497.E.a.b	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00950000182916.a.a #22	ENSGT00950000185200	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Crab-eating macaque	MODERN SPECIES	10	LMNB2 (ENSMFAG00000044219)	GADD45B (ENSMFAG00000042254)	ENSMFAG00000065748	ENSMFAG00000058005	SGTA (ENSMFAG00000034409)	THOP1 (ENSMFAG00000036742)	ZNF554 (ENSMFAG00000045795)	ZNF555 (ENSMFAG00000044275)	ZNF556 (ENSMFAG00000039163)	ZNF77 (ENSMFAG00000045401)	TLE6 (ENSMFAG00000003537) #13	TLE2 (ENSMFAG00000033930) #15	TLE5 (ENSMFAG00000057458) #16	ENSMFAG00000031277	ENSMFAG00000050957 #21	NFIC (ENSMFAG00000000744) #22	SMIM24 (ENSMFAG00000037612) #23	FZR1 (ENSMFAG00000003458) #25	TEKTIP1 (ENSMFAG00000036699) #26	MFSD12 (ENSMFAG00000039649) #27	APBA3 (ENSMFAG00000044015) #34	MRPL54 (ENSMFAG00000003311) #35	MATK (ENSMFAG00000030470) #36	RAX2 (ENSMFAG00000065615)	ZFR2 (ENSMFAG00000031215) #37	ATCAY (ENSMFAG00000002982)	ENSMFAG00000040276	ENSMFAG00000052942	ENSMFAG00000028991	NMRK2 (ENSMFAG00000033332)	PIAS4 (ENSMFAG00000046119)
Rhesus	MODERN SPECIES	10	DIRAS1 (ENSMMUG00000040263)	SGTA (ENSMMUG00000007265)	THOP1 (ENSMMUG00000007268)	ZNF554 (ENSMMUG00000055755)	ZNF555 (ENSMMUG00000007485)	ZNF556 (ENSMMUG00000048942)	ZNF77 (ENSMMUG00000008458)	TLE6 (ENSMMUG00000002912) #13	TLE2 (ENSMMUG00000002913) #15	ENSMMUG00000050313	GNA11 (ENSMMUG00000002961) #17	GNA15 (ENSMMUG00000047845) #18	NCLN (ENSMMUG00000017036) #20	CELF5 (ENSMMUG00000015513) #21	ENSMMUG00000060497	NFIC (ENSMMUG00000003439) #22	ENSMMUG00000057142	ENSMMUG00000050017	SMIM24 (ENSMMUG00000010560) #23	SMIM44 (ENSMMUG00000059495)	DOHH (ENSMMUG00000057146) #24	FZR1 (ENSMMUG00000019870) #25	TEKTIP1 (ENSMMUG00000039983) #26	MFSD12 (ENSMMUG00000010653) #27	HMG20B (ENSMMUG00000018096) #28	GIPC3 (ENSMMUG00000011402) #29	TBXA2R (ENSMMUG00000011403) #30	CACTIN (ENSMMUG00000028931) #31	PIP5K1C (ENSMMUG00000008137) #32	TJP3 (ENSMMUG00000028930) #33	APBA3 (ENSMMUG00000009672) #34
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00910000148398	ENSGT00390000003420.b.a.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00910000148398	ENSGT00390000003420.b.a.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Sooty mangabey	MODERN SPECIES	177	ENSCATG00000006442	SGTA (ENSCATG00000033872)	THOP1 (ENSCATG00000015509)	ZNF554 (ENSCATG00000044721)	ZNF555 (ENSCATG00000041704)	ZNF556 (ENSCATG00000039430)	ZNF77 (ENSCATG00000039733)	TLE6 (ENSCATG00000041256) #13	TLE2 (ENSCATG00000035147) #15	TLE5 (ENSCATG00000040517) #16	GNA11 (ENSCATG00000038504) #17	GNA15 (ENSCATG00000044954) #18	S1PR4 (ENSCATG00000017923) #19	NCLN (ENSCATG00000044668) #20	ENSCATG00000044494 #21	NFIC (ENSCATG00000037966) #22	SMIM24 (ENSCATG00000037417) #23	SMIM44 (ENSCATG00000030734)	DOHH (ENSCATG00000033001) #24	FZR1 (ENSCATG00000044993) #25	TEKTIP1 (ENSCATG00000044766) #26	MFSD12 (ENSCATG00000045111) #27	HMG20B (ENSCATG00000034700) #28	GIPC3 (ENSCATG00000041662) #29	TBXA2R (ENSCATG00000037254) #30	CACTIN (ENSCATG00000042320) #31	PIP5K1C (ENSCATG00000033912) #32	TJP3 (ENSCATG00000038428) #33	APBA3 (ENSCATG00000040664) #34	MRPL54 (ENSCATG00000014066) #35	RAX2 (ENSCATG00000038515)
Drill	MODERN SPECIES	1534								TLE6 (ENSMLEG00000000586) #13	TLE2 (ENSMLEG00000008863) #15	TLE5 (ENSMLEG00000038877) #16	GNA11 (ENSMLEG00000004955) #17	GNA15 (ENSMLEG00000033896) #18	S1PR4 (ENSMLEG00000020497) #19	NCLN (ENSMLEG00000041935) #20	ENSMLEG00000000058	NFIC (ENSMLEG00000039794) #22	SMIM24 (ENSMLEG00000030699) #23	SMIM44 (ENSMLEG00000031138)	DOHH (ENSMLEG00000037533) #24	FZR1 (ENSMLEG00000042148) #25	TEKTIP1 (ENSMLEG00000038754) #26	ENSMLEG00000030548	MFSD12 (ENSMLEG00000040700) #27	ENSMLEG00000035384	GIPC3 (ENSMLEG00000025100) #29	TBXA2R (ENSMLEG00000040764) #30	CACTIN (ENSMLEG00000017451) #31	PIP5K1C (ENSMLEG00000031430) #32	TJP3 (ENSMLEG00000019934) #33	APBA3 (ENSMLEG00000038059) #34	ENSMLEG00000039241 #35
Olive baboon	MODERN SPECIES	12	ANKRD24 (ENSPANG00000007947) #11	SIRT6 (ENSPANG00000004922) #12	CREB3L3 (ENSPANG00000003567)	MAP2K2 (ENSPANG00000008882)	ZBTB7A (ENSPANG00000010574)	PIAS4 (ENSPANG00000003087)	EEF2 (ENSPANG00000007589)	NMRK2 (ENSPANG00000013229)	ATCAY (ENSPANG00000000280)	ZFR2 (ENSPANG00000003088) #37	MATK (ENSPANG00000017163) #36	RAX2 (ENSPANG00000013783)	MRPL54 (ENSPANG00000033944) #35	APBA3 (ENSPANG00000003568) #34	TJP3 (ENSPANG00000013784) #33	NFIC (ENSPANG00000004923) #22	SMIM44 (ENSPANG00000029842)	DOHH (ENSPANG00000032446) #24	FZR1 (ENSPANG00000004724) #25	TEKTIP1 (ENSPANG00000019078) #26	ENSPANG00000010575	GIPC3 (ENSPANG00000038587) #29	TBXA2R (ENSPANG00000018961) #30	CACTIN (ENSPANG00000019259) #31	TLE6 (ENSPANG00000014013) #13	ENSPANG00000012740 #15	ENSPANG00000047059 #15	TLE5 (ENSPANG00000016061) #16	GNA11 (ENSPANG00000011891) #17	GNA15 (ENSPANG00000002676) #18	S1PR4 (ENSPANG00000020422) #19
Vervet Monkey	MODERN SPECIES	25	SGTA (ENSCSAG00000011493)	THOP1 (ENSCSAG00000011480)	ENSCSAG00000011474	ZNF554 (ENSCSAG00000011470)	ZNF555 (ENSCSAG00000011462)	ZNF556 (ENSCSAG00000011448)	ZNF57 (ENSCSAG00000011445)	ZNF77 (ENSCSAG00000011439)	TLE6 (ENSCSAG00000011416) #13	TLE2 (ENSCSAG00000011330) #15	GNA11 (ENSCSAG00000011235) #17	GNA15 (ENSCSAG00000011230) #18	S1PR4 (ENSCSAG00000018815) #19	NCLN (ENSCSAG00000011222) #20	CELF5 (ENSCSAG00000011210)	NFIC (ENSCSAG00000011182) #22	SMIM24 (ENSCSAG00000011179) #23	DOHH (ENSCSAG00000011169) #24	FZR1 (ENSCSAG00000011164) #25	TEKTIP1 (ENSCSAG00000011154) #26	MFSD12 (ENSCSAG00000011148) #27	HMG20B (ENSCSAG00000011140) #28	GIPC3 (ENSCSAG00000011131) #29	TBXA2R (ENSCSAG00000011119) #30	CACTIN (ENSCSAG00000011116) #31	PIP5K1C (ENSCSAG00000011108) #32	TJP3 (ENSCSAG00000011066) #33	APBA3 (ENSCSAG00000010973) #34	MRPL54 (ENSCSAG00000010950) #35	RAX2 (ENSCSAG00000010944)	MATK (ENSCSAG00000010938) #36
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Golden snub-nosed monkey	MODERN SPECIES	1318	SLC39A3 (ENSRROG00000028677)	SGTA (ENSRROG00000018224)	THOP1 (ENSRROG00000031016)	ZNF554 (ENSRROG00000039041)	ZNF555 (ENSRROG00000043176)	ZNF556 (ENSRROG00000007558)	ZNF57 (ENSRROG00000030059)	ZNF77 (ENSRROG00000028828)	TLE6 (ENSRROG00000018085) #13	TLE2 (ENSRROG00000033121) #15	TLE5 (ENSRROG00000038789) #16	GNA11 (ENSRROG00000032415) #17	GNA15 (ENSRROG00000035571) #18	NCLN (ENSRROG00000028611) #20	CELF5 (ENSRROG00000032625)	NFIC (ENSRROG00000044677) #22	SMIM24 (ENSRROG00000032951) #23	SMIM44 (ENSRROG00000030107)	DOHH (ENSRROG00000043930) #24	FZR1 (ENSRROG00000036142) #25	TEKTIP1 (ENSRROG00000042406) #26	MFSD12 (ENSRROG00000038465) #27	HMG20B (ENSRROG00000012256) #28	ENSRROG00000044154	GIPC3 (ENSRROG00000031972) #29	TBXA2R (ENSRROG00000044222) #30	CACTIN (ENSRROG00000032395) #31	PIP5K1C (ENSRROG00000032134) #32	TJP3 (ENSRROG00000024434) #33	APBA3 (ENSRROG00000033516) #34	MRPL54 (ENSRROG00000018776) #35
Black snub-nosed monkey	MODERN SPECIES	1375							ZNF57 (ENSRBIG00000044805)	ZNF77 (ENSRBIG00000029867)	TLE6 (ENSRBIG00000039750) #13	TLE2 (ENSRBIG00000028459) #15	TLE5 (ENSRBIG00000001610) #16	GNA11 (ENSRBIG00000020274) #17	GNA15 (ENSRBIG00000036769) #18	NCLN (ENSRBIG00000040050) #20	ENSRBIG00000038502	NFIC (ENSRBIG00000040502) #22	SMIM24 (ENSRBIG00000033962) #23	SMIM44 (ENSRBIG00000033666)	DOHH (ENSRBIG00000039236) #24	FZR1 (ENSRBIG00000040539) #25	TEKTIP1 (ENSRBIG00000028614) #26	MFSD12 (ENSRBIG00000017416) #27	HMG20B (ENSRBIG00000041734) #28	GIPC3 (ENSRBIG00000038552) #29	TBXA2R (ENSRBIG00000036411) #30	CACTIN (ENSRBIG00000006919) #31	TTC7A (ENSRBIG00000043771)	STPG4 (ENSRBIG00000014563)	ENSRBIG00000033764	EPCAM (ENSRBIG00000042447)	MSH2 (ENSRBIG00000031403)
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033.c #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00910000147504	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033.c.a #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Gorilla	MODERN SPECIES	10	SGTA (ENSGGOG00000007913)	THOP1 (ENSGGOG00000007922)	ZNF554 (ENSGGOG00000026098)	ENSGGOG00000001761	ZNF556 (ENSGGOG00000008748)	ZNF57 (ENSGGOG00000006285)	ZNF77 (ENSGGOG00000010217)	TLE6 (ENSGGOG00000014760) #13	TLE2 (ENSGGOG00000014765) #15	ENSGGOG00000010731 #16	GNA11 (ENSGGOG00000014995) #17	ENSGGOG00000040253	GNA15 (ENSGGOG00000003077) #18	NCLN (ENSGGOG00000010398) #20	ENSGGOG00000041211 #21	NFIC (ENSGGOG00000006557) #22	ENSGGOG00000038229	SMIM44 (ENSGGOG00000036474)	ENSGGOG00000011214 #24	FZR1 (ENSGGOG00000002200) #25	TEKTIP1 (ENSGGOG00000002202) #26	MFSD12 (ENSGGOG00000002205) #27	HMG20B (ENSGGOG00000014805) #28	GIPC3 (ENSGGOG00000027202) #29	TBXA2R (ENSGGOG00000013761) #30	CACTIN (ENSGGOG00000012532) #31	PIP5K1C (ENSGGOG00000012543) #32	TJP3 (ENSGGOG00000004626) #33	APBA3 (ENSGGOG00000004637) #34	MRPL54 (ENSGGOG00000014722) #35	RAX2 (ENSGGOG00000014727)
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033.c.a #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Pan	ANCESTRAL SPECIES	14	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033.c.a #17	ENSGT00940000161736 #18	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Bonobo	MODERN SPECIES	10	SLC39A3 (ENSPPAG00000043276)	SGTA (ENSPPAG00000018507)	THOP1 (ENSPPAG00000032083)	ZNF554 (ENSPPAG00000039331)	ZNF555 (ENSPPAG00000042762)	ZNF556 (ENSPPAG00000015477)	ENSPPAG00000028174	ZNF77 (ENSPPAG00000031195)	TLE6 (ENSPPAG00000029714) #13	ENSPPAG00000038446 #15	ENSPPAG00000007067 #16	GNA11 (ENSPPAG00000038754) #17	GNA15 (ENSPPAG00000041303) #18	NCLN (ENSPPAG00000043465) #20	ENSPPAG00000029786 #21	NFIC (ENSPPAG00000036536) #22	SMIM24 (ENSPPAG00000041504) #23	SMIM44 (ENSPPAG00000032436)	DOHH (ENSPPAG00000004289) #24	FZR1 (ENSPPAG00000043553) #25	TEKTIP1 (ENSPPAG00000035424) #26	MFSD12 (ENSPPAG00000040119) #27	HMG20B (ENSPPAG00000042698) #28	GIPC3 (ENSPPAG00000005107) #29	TBXA2R (ENSPPAG00000033099) #30	CACTIN (ENSPPAG00000028205) #31	PIP5K1C (ENSPPAG00000029984) #32	TJP3 (ENSPPAG00000040704) #33	APBA3 (ENSPPAG00000026188) #34	MRPL54 (ENSPPAG00000042418) #35	RAX2 (ENSPPAG00000039142)
Chimpanzee	MODERN SPECIES	10	SGTA (ENSPTRG00000010243)	THOP1 (ENSPTRG00000010244)	ZNF554 (ENSPTRG00000010245)	ZNF555 (ENSPTRG00000010246)	ZNF556 (ENSPTRG00000010247)	ZNF57 (ENSPTRG00000010248)	ZNF77 (ENSPTRG00000010249)	TLE6 (ENSPTRG00000010250) #13	TLE2 (ENSPTRG00000010252) #15	ENSPTRG00000043065 #15	TLE5 (ENSPTRG00000010253) #16	GNA11 (ENSPTRG00000010254) #17	GNA15 (ENSPTRG00000010256) #18	NCLN (ENSPTRG00000010258) #20	CELF5 (ENSPTRG00000010259)	NFIC (ENSPTRG00000010261) #22	SMIM24 (ENSPTRG00000049658) #23	SMIM44 (ENSPTRG00000050433)	DOHH (ENSPTRG00000010263) #24	FZR1 (ENSPTRG00000010264) #25	TEKTIP1 (ENSPTRG00000010265) #26	MFSD12 (ENSPTRG00000010267) #27	HMG20B (ENSPTRG00000010268) #28	GIPC3 (ENSPTRG00000010269) #29	TBXA2R (ENSPTRG00000050832) #30	CACTIN (ENSPTRG00000010272) #31	PIP5K1C (ENSPTRG00000010273) #32	TJP3 (ENSPTRG00000010274) #33	APBA3 (ENSPTRG00000010275) #34	MRPL54 (ENSPTRG00000010276) #35	RAX2 (ENSPTRG00000010277)
Human	MODERN SPECIES	10	SGTA (ENSG00000104969)	THOP1 (ENSG00000172009)	ZNF554 (ENSG00000172006)	ZNF555 (ENSG00000186300)	ZNF556 (ENSG00000172000)	ZNF57 (ENSG00000171970)	ZNF77 (ENSG00000175691)	TLE6 (ENSG00000104953) #13	TLE2 (ENSG00000065717) #15	TLE5 (ENSG00000104964) #16	GNA11 (ENSG00000088256) #17	GNA15 (ENSG00000060558) #18	S1PR4 (ENSG00000125910) #19	NCLN (ENSG00000125912) #20	CELF5 (ENSG00000161082)	NFIC (ENSG00000141905) #22	SMIM24 (ENSG00000095932) #23	SMIM44 (ENSG00000284638)	DOHH (ENSG00000129932) #24	FZR1 (ENSG00000105325) #25	MFSD12 (ENSG00000161091) #27	TEKTIP1 (ENSG00000183397) #26	HMG20B (ENSG00000064961) #28	GIPC3 (ENSG00000179855) #29	TBXA2R (ENSG00000006638) #30	CACTIN (ENSG00000105298) #31	PIP5K1C (ENSG00000186111) #32	TJP3 (ENSG00000105289) #33	APBA3 (ENSG00000011132) #34	MRPL54 (ENSG00000183617) #35	RAX2 (ENSG00000173976)
Orangutan	MODERN SPECIES	10	THOP1 (ENSPPYG00000009359)	ZNF554 (ENSPPYG00000039445)	ENSPPYG00000012058	ENSPPYG00000012138	ZNF555 (ENSPPYG00000009360)	ZNF556 (ENSPPYG00000039854)	ZNF77 (ENSPPYG00000009361)	TLE6 (ENSPPYG00000009362) #13	TLE2 (ENSPPYG00000009363) #15	ENSPPYG00000009364 #16	GNA11 (ENSPPYG00000009366) #17	GNA15 (ENSPPYG00000009367) #18	S1PR4 (ENSPPYG00000009368) #19	NCLN (ENSPPYG00000009369) #20	CELF5 (ENSPPYG00000009370)	NFIC (ENSPPYG00000009371) #22	ENSPPYG00000032854 #23	SMIM44 (ENSPPYG00000009372)	DOHH (ENSPPYG00000009373) #24	FZR1 (ENSPPYG00000009374) #25	TEKTIP1 (ENSPPYG00000009376) #26	ENSPPYG00000034014	MFSD12 (ENSPPYG00000009377) #27	HMG20B (ENSPPYG00000009378) #28	GIPC3 (ENSPPYG00000009379) #29	TBXA2R (ENSPPYG00000009381) #30	CACTIN (ENSPPYG00000009382) #31	PIP5K1C (ENSPPYG00000009383) #32	TJP3 (ENSPPYG00000009384) #33	APBA3 (ENSPPYG00000009385) #34	MRPL54 (ENSPPYG00000040130) #35
Gibbon	MODERN SPECIES	7	SLC39A3 (ENSNLEG00000029054)	SGTA (ENSNLEG00000002311)	THOP1 (ENSNLEG00000002434)	ZNF554 (ENSNLEG00000027068)	ZNF555 (ENSNLEG00000002452)	ZNF556 (ENSNLEG00000002456)	ENSNLEG00000035301	ZNF77 (ENSNLEG00000002461)	TLE6 (ENSNLEG00000002466) #13	ENSNLEG00000002512 #15	ENSNLEG00000032291 #16	ENSNLEG00000002517 #17	GNA15 (ENSNLEG00000028276) #18	NCLN (ENSNLEG00000002535) #20	ENSNLEG00000002553	ENSNLEG00000002563 #22	ENSNLEG00000034914 #23	SMIM44 (ENSNLEG00000029122)	ENSNLEG00000030890 #24	ENSNLEG00000029120	FZR1 (ENSNLEG00000002571) #25	ENSNLEG00000033946 #26	ENSNLEG00000002687 #27	GIPC3 (ENSNLEG00000002712) #29	TBXA2R (ENSNLEG00000002715) #30	ENSNLEG00000002565 #31	ENSNLEG00000031233 #32	TJP3 (ENSNLEG00000002720) #33	APBA3 (ENSNLEG00000002776) #34	ENSNLEG00000002809 #35	RAX2 (ENSNLEG00000002811)
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.b	ENSGT00950000182755.b.a.a.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Equus	ANCESTRAL SPECIES	34	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00390000001201 #35	ENSGT00940000160384 #34	ENSGT00940000160036 #33	ENSGT00940000159258 #32	ENSGT00950000183102.A.a #31	ENSGT00520000060565	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #29	ENSGT00940000161213 #28	ENSGT00390000005318.a #27	ENSGT00390000004282 #26	ENSGT00950000183104.B.a.a #25	ENSGT00500000044957 #24	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00940000154201.a.a.b.d	ENSGT00500000044945.a #20	ENSGT01050000244887.B #19	ENSGT00940000161736 #18	ENSGT00940000161033 #17	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000162830.a.a.b.a.a.a	ENSGT00940000162830.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.a.b	ENSGT00940000162830.a.a.a
Horse	MODERN SPECIES	28	ATCAY (ENSECAG00000015094)	ZFR2 (ENSECAG00000007090) #37	MATK (ENSECAG00000057591) #36	RAX2 (ENSECAG00000027953)	TJP3 (ENSECAG00000011885) #33	APBA3 (ENSECAG00000021308) #34	PIP5K1C (ENSECAG00000033728) #32	CACTIN (ENSECAG00000039454) #31	ENSECAG00000051988	TBXA2R (ENSECAG00000038039) #30	ENSECAG00000033958 #28	MFSD12 (ENSECAG00000050601) #27	TEKTIP1 (ENSECAG00000043412) #26	FZR1 (ENSECAG00000016933) #25	DOHH (ENSECAG00000016441) #24	NFIC (ENSECAG00000008134) #22	ENSECAG00000044034 #23	CELF5 (ENSECAG00000018055)	NCLN (ENSECAG00000015197) #20	S1PR4 (ENSECAG00000001851) #19	GNA11 (ENSECAG00000023654) #17	TLE2 (ENSECAG00000024314) #15	TLE6 (ENSECAG00000022366) #13	ENSECAG00000001472	ENSECAG00000043972	ENSECAG00000043845	ENSECAG00000055018	ENSECAG00000033586	ZNF57 (ENSECAG00000032997)	ENSECAG00000040891	ENSECAG00000050855
Donkey	MODERN SPECIES	12	ZFR2 (ENSEASG00005022296) #37	MATK (ENSEASG00005022288) #36	RAX2 (ENSEASG00005026320)	MRPL54 (ENSEASG00005022283) #35	APBA3 (ENSEASG00005022276) #34	TJP3 (ENSEASG00005022268) #33	PIP5K1C (ENSEASG00005022261) #32	CACTIN (ENSEASG00005030573) #31	TBXA2R (ENSEASG00005022250) #30	GIPC3 (ENSEASG00005022246) #29	HMG20B (ENSEASG00005022241) #28	MFSD12 (ENSEASG00005022236) #27	TEKTIP1 (ENSEASG00005036506) #26	ENSEASG00005022196 #25	ENSEASG00005022139 #24	ENSEASG00005022128 #22	ENSEASG00005028009 #23	ENSEASG00005022118	NCLN (ENSEASG00005022112) #20	S1PR4 (ENSEASG00005027401) #19	GNA15 (ENSEASG00005022106) #18	GNA11 (ENSEASG00005030989) #17	TLE5 (ENSEASG00005022089) #16	TLE2 (ENSEASG00005022082) #15	ENSEASG00005036612 #13	ENSEASG00005032268	ENSEASG00005029282	ENSEASG00005022064	ENSEASG00005031905	ENSEASG00005022062	ENSEASG00005022060
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830.a.a.b.a	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Megabat	MODERN SPECIES	999																NFIC (ENSPVAG00000004084) #22	SMIM44 (ENSPVAG00000004085)	DOHH (ENSPVAG00000004086) #24	FZR1 (ENSPVAG00000004087) #25	TEKTIP1 (ENSPVAG00000004088) #26	MFSD12 (ENSPVAG00000004089) #27
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830.a.a.b.a	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Greater horseshoe bat	MODERN SPECIES	9	ZNF555 (ENSRFEG00010008378)	ZNF556 (ENSRFEG00010008289)	ENSRFEG00010008241	ENSRFEG00010008227	ENSRFEG00010008210	ENSRFEG00010008195	ENSRFEG00010008173	TLE6 (ENSRFEG00010008056) #13	TLE2 (ENSRFEG00010007728) #15	TLE5 (ENSRFEG00010007634) #16	GNA11 (ENSRFEG00010007595) #17	GNA15 (ENSRFEG00010007554) #18	S1PR4 (ENSRFEG00010007509) #19	NCLN (ENSRFEG00010021024) #20	ENSRFEG00010020980 #21	NFIC (ENSRFEG00010020868) #22	SMIM24 (ENSRFEG00010020808) #23	SMIM44 (ENSRFEG00010020793)	DOHH (ENSRFEG00010020783) #24	FZR1 (ENSRFEG00010020757) #25	TEKTIP1 (ENSRFEG00010020734) #26	MFSD12 (ENSRFEG00010020692) #27	HMG20B (ENSRFEG00010020638) #28	GIPC3 (ENSRFEG00010020593) #29	TBXA2R (ENSRFEG00010020570) #30	CACTIN (ENSRFEG00010020557) #31	PIP5K1C (ENSRFEG00010020492) #32	TJP3 (ENSRFEG00010020437) #33	APBA3 (ENSRFEG00010020395) #34	MRPL54 (ENSRFEG00010020373) #35	RAX2 (ENSRFEG00010020350)
Microbat	MODERN SPECIES	1279	TIMM13 (ENSMLUG00000014659)	LMNB2 (ENSMLUG00000013317)	GADD45B (ENSMLUG00000009419)	GNG7 (ENSMLUG00000029543)	DIRAS1 (ENSMLUG00000002744)	SLC39A3 (ENSMLUG00000014303)	SGTA (ENSMLUG00000010345)	THOP1 (ENSMLUG00000014305)	ENSMLUG00000023178	TLE6 (ENSMLUG00000013752) #13	ENSMLUG00000013756 ##16	GNA11 (ENSMLUG00000006991) #17	ENSMLUG00000007046 #18	NCLN (ENSMLUG00000022540) #20	ENSMLUG00000006471 #21	NFIC (ENSMLUG00000006476) #22	SMIM24 (ENSMLUG00000006483) #23
Carnivora	ANCESTRAL SPECIES	6	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Caniformia	ANCESTRAL SPECIES	4	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00390000003403	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##16	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00390000003403	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Ursidae	ANCESTRAL SPECIES	20	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Giant Panda	MODERN SPECIES	14	SGTA (ENSAMEG00000005257)	THOP1 (ENSAMEG00000005314)	ZNF554 (ENSAMEG00000005360)	ENSAMEG00000005363	ZNF555 (ENSAMEG00000005361)	ZNF556 (ENSAMEG00000005362)	ENSAMEG00000029425	TLE6 (ENSAMEG00000005371) #13	TLE2 (ENSAMEG00000005391) #15	ENSAMEG00000029178 ##16	GNA11 (ENSAMEG00000005458) #17	GNA15 (ENSAMEG00000005493) #18	S1PR4 (ENSAMEG00000005495) #19	NCLN (ENSAMEG00000005496) #20	ENSAMEG00000005527 #21	NFIC (ENSAMEG00000005577) #22	ENSAMEG00000030871	ENSAMEG00000028568	ENSAMEG00000005619 #24	ENSAMEG00000030978 #26	MFSD12 (ENSAMEG00000005668) #27	ENSAMEG00000030856 #28	GIPC3 (ENSAMEG00000005731) #29	ENSAMEG00000028252	TBXA2R (ENSAMEG00000005733) #30	CACTIN (ENSAMEG00000005743) #31	PIP5K1C (ENSAMEG00000005756) #32	TJP3 (ENSAMEG00000005786) #33	APBA3 (ENSAMEG00000005876) #34	MRPL54 (ENSAMEG00000028994) #35	RAX2 (ENSAMEG00000005914)
Ursus	ANCESTRAL SPECIES	16	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425.c	ENSGT00940000162830.b	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572	ENSGT00940000160775 #36	ENSGT00940000162148 #37
American black bear	MODERN SPECIES	1305													GNA15 (ENSUAMG00000027170) #18	NCLN (ENSUAMG00000027173) #20	CELF5 (ENSUAMG00000027174)	NFIC (ENSUAMG00000027186) #22
Polar bear	MODERN SPECIES	455	SGTA (ENSUMAG00000006851)	THOP1 (ENSUMAG00000006911)	ZNF554 (ENSUMAG00000007110)	ZNF555 (ENSUMAG00000007119)	ENSUMAG00000007135	ENSUMAG00000007139	ENSUMAG00000007151	ENSUMAG00000007158	ENSUMAG00000007167	ENSUMAG00000007190 #15	ENSUMAG00000007194 #15	ENSUMAG00000007196 ##16	GNA11 (ENSUMAG00000007211) #17	GNA15 (ENSUMAG00000007215) #18	ENSUMAG00000007241 #21	NFIC (ENSUMAG00000007265) #22	ENSUMAG00000007296	FZR1 (ENSUMAG00000007307) #25	TEKTIP1 (ENSUMAG00000007354) #26	MFSD12 (ENSUMAG00000007358) #27	ENSUMAG00000007381 #29	ENSUMAG00000007383	ENSUMAG00000007385 #31	PIP5K1C (ENSUMAG00000007390) #32	MRPL54 (ENSUMAG00000007416) #35	ENSUMAG00000007421	MATK (ENSUMAG00000007427) #36	ENSUMAG00000007440 #37	ENSUMAG00000007447	ATCAY (ENSUMAG00000007452)	ENSUMAG00000007459
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##16	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Ferret	MODERN SPECIES	326				ENSMPUG00000003303	ENSMPUG00000003309	ENSMPUG00000003317	TLE6 (ENSMPUG00000003319) #13	ENSMPUG00000003353 #16	ENSMPUG00000003642	GNA11 (ENSMPUG00000003649) #17	GNA15 (ENSMPUG00000003706) #18	S1PR4 (ENSMPUG00000019701) #19	ENSMPUG00000003708	NCLN (ENSMPUG00000003713) #20	CELF5 (ENSMPUG00000003723)	NFIC (ENSMPUG00000003850) #22	ENSMPUG00000003859	ENSMPUG00000003863 #23	DOHH (ENSMPUG00000003868) #24	ENSMPUG00000019702	FZR1 (ENSMPUG00000003874) #25	MFSD12 (ENSMPUG00000003886) #27	HMG20B (ENSMPUG00000003925) #28	GIPC3 (ENSMPUG00000003985) #29	TBXA2R (ENSMPUG00000004032) #30	CACTIN (ENSMPUG00000004036) #31	PIP5K1C (ENSMPUG00000004050) #32	TJP3 (ENSMPUG00000004062) #33	APBA3 (ENSMPUG00000004145) #34	MRPL54 (ENSMPUG00000004155) #35	MATK (ENSMPUG00000004170) #36
American mink	MODERN SPECIES	175	SGTA (ENSNVIG00000005464)	THOP1 (ENSNVIG00000005485)	ZNF554 (ENSNVIG00000005517)	ZNF555 (ENSNVIG00000005522)	ZNF556 (ENSNVIG00000005545)	ENSNVIG00000005559	ENSNVIG00000005595	ENSNVIG00000005725 #13	TLE2 (ENSNVIG00000005768) #15	ENSNVIG00000005979 ##16	GNA11 (ENSNVIG00000006010) #17	GNA15 (ENSNVIG00000006085) #18	S1PR4 (ENSNVIG00000006107) #19	NCLN (ENSNVIG00000006116) #20	ENSNVIG00000006149	NFIC (ENSNVIG00000006247) #22	CS077 (ENSNVIG00000006275) #23	DOHH (ENSNVIG00000006293) #24	FZR (ENSNVIG00000006305) #25	TEKTIP1 (ENSNVIG00000006395) #26	MFSD12 (ENSNVIG00000006407) #27	HMG20B (ENSNVIG00000006433) #28	GIPC3 (ENSNVIG00000006504) #29	TBXA2R (ENSNVIG00000006523) #30	CACTIN (ENSNVIG00000006539) #31	PIP5K1C (ENSNVIG00000006640) #32	TJP3 (ENSNVIG00000006858) #33	APBA3 (ENSNVIG00000006915) #34	MRPL54 (ENSNVIG00000006941) #35	RAX2 (ENSNVIG00000006966)	MATK (ENSNVIG00000006982) #36
Canidae	ANCESTRAL SPECIES		ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Red fox	MODERN SPECIES	163	ZNF554 (ENSVVUG00000002833)	ZNF555 (ENSVVUG00000002836)	ZNF556 (ENSVVUG00000002841)	ENSVVUG00000002849	ENSVVUG00000002857	ENSVVUG00000002863 #13	TLE2 (ENSVVUG00000002888) #15	ENSVVUG00000002912 ##16	GNA11 (ENSVVUG00000002939) #17	GNA15 (ENSVVUG00000002952) #18	S1PR4 (ENSVVUG00000002968) #19	NCLN (ENSVVUG00000002992) #20	ENSVVUG00000003242	ENSVVUG00000003246	ENSVVUG00000003252	NFIC (ENSVVUG00000003261) #22	SMIM24 (ENSVVUG00000003269) #23	DOHH (ENSVVUG00000003275) #24	FZR1 (ENSVVUG00000003282) #25	CUNH19orf71 (ENSVVUG00000003289) #26	MFSD12 (ENSVVUG00000003293) #27	HMG20B (ENSVVUG00000003300) #28	GIPC3 (ENSVVUG00000003327) #29	TBXA2R (ENSVVUG00000003357) #30	CACTIN (ENSVVUG00000003362) #31	PIP5K1C (ENSVVUG00000003369) #32	TJP3 (ENSVVUG00000003419) #33	APBA3 (ENSVVUG00000004405) #34	MRPL54 (ENSVVUG00000004420) #35	RAX2 (ENSVVUG00000004425)	MATK (ENSVVUG00000004432) #36
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Dog	MODERN SPECIES	12	SLC39A3 (ENSCAFG00845011490)	SGTA (ENSCAFG00845011392)	THOP1 (ENSCAFG00845011294)	ZNF554 (ENSCAFG00845011258)	ZNF555 (ENSCAFG00845011220)	ZNF556 (ENSCAFG00845011193)	ENSCAFG00845011169	ENSCAFG00845011118 #13	TLE2 (ENSCAFG00845010748) #15	GNA11 (ENSCAFG00845010571) #17	TLE5 (ENSCAFG00845010466) #16	GNA15 (ENSCAFG00845010390) #18	S1PR4 (ENSCAFG00845010367) #19	NCLN (ENSCAFG00845010334) #20	CELF5 (ENSCAFG00845010202)	NFIC (ENSCAFG00845009756) #22	SMIM24 (ENSCAFG00845009603) #23	DOHH (ENSCAFG00845009508) #24	FZR1 (ENSCAFG00845009377) #25	C20H19orf71 (ENSCAFG00845009301) #26	MFSD12 (ENSCAFG00845009196) #27	ENSCAFG00845009058 #28	GIPC3 (ENSCAFG00845009000) #29	ENSCAFG00845008979	TBXA2R (ENSCAFG00845008905) #30	CACTIN (ENSCAFG00845008863) #31	PIP5K1C (ENSCAFG00845008444) #32	TJP3 (ENSCAFG00845008169) #33	APBA3 (ENSCAFG00845008066) #34	MRPL54 (ENSCAFG00845008032) #35	RAX2 (ENSCAFG00845008002)
Dingo	MODERN SPECIES	112	SLC39A3 (ENSCAFG00020018206)	SGTA (ENSCAFG00020018207)	THOP1 (ENSCAFG00020018211)	ZNF554 (ENSCAFG00020018214)	ZNF555 (ENSCAFG00020018217)	ZNF556 (ENSCAFG00020018221)	ENSCAFG00020018224	ENSCAFG00020018225	ENSCAFG00020018228 #13	TLE2 (ENSCAFG00020018233) #15	TLE5 (ENSCAFG00020018242) #16	GNA11 (ENSCAFG00020018245) #17	GNA15 (ENSCAFG00020018249) #18	NCLN (ENSCAFG00020018259) #20	CELF5 (ENSCAFG00020018264)	NFIC (ENSCAFG00020018281) #22	ENSCAFG00020018292 #23	DOHH (ENSCAFG00020018295) #24	FZR1 (ENSCAFG00020018296) #25	TEKTIP1 (ENSCAFG00020018300) #26	MFSD12 (ENSCAFG00020018303) #27	HMG20B (ENSCAFG00020018306) #28	GIPC3 (ENSCAFG00020018309) #29	TBXA2R (ENSCAFG00020018318) #30	CACTIN (ENSCAFG00020018320) #31	PIP5K1C (ENSCAFG00020018324) #32	TJP3 (ENSCAFG00020018326) #33	APBA3 (ENSCAFG00020018330) #34	MRPL54 (ENSCAFG00020018333) #35	RAX2 (ENSCAFG00020018334)	MATK (ENSCAFG00020018336) #36
Felidae	ANCESTRAL SPECIES	21	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Cat	MODERN SPECIES	1	ZNF555 (ENSFCAG00000022276)	ENSFCAG00000032030	ENSFCAG00000048662	ENSFCAG00000052308	ENSFCAG00000052219	ENSFCAG00000050649	ENSFCAG00000035220	TLE6 (ENSFCAG00000013862) #13	TLE2 (ENSFCAG00000013863) #15	TLE5 (ENSFCAG00000039147) #16	GNA11 (ENSFCAG00000044642) #17	GNA15 (ENSFCAG00000007124) #18	S1PR4 (ENSFCAG00000007126) #19	NCLN (ENSFCAG00000029146) #20	CELF5 (ENSFCAG00000007127)	NFIC (ENSFCAG00000000880) #22	SMIM24 (ENSFCAG00000052509) #23	DOHH (ENSFCAG00000030060) #24	FZR1 (ENSFCAG00000002157) #25	CA2H19orf71 (ENSFCAG00000000882) #26	MFSD12 (ENSFCAG00000000883) #27	HMG20B (ENSFCAG00000026167) #28	GIPC3 (ENSFCAG00000007137) #29	ENSFCAG00000051232	TBXA2R (ENSFCAG00000012120) #30	CACTIN (ENSFCAG00000023235) #31	PIP5K1C (ENSFCAG00000007139) #32	TJP3 (ENSFCAG00000007142) #33	APBA3 (ENSFCAG00000019172) #34	MRPL54 (ENSFCAG00000007144) #35	RAX2 (ENSFCAG00000040863)
Panthera	ANCESTRAL SPECIES	15	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Tiger	MODERN SPECIES	54	GNG7 (ENSPTIG00000014250)	DIRAS1 (ENSPTIG00000005639)	SLC39A3 (ENSPTIG00000013803)	SGTA (ENSPTIG00000013472)	THOP1 (ENSPTIG00000012118)	ZNF554 (ENSPTIG00000011725)	ZNF555 (ENSPTIG00000011529)	ZNF556 (ENSPTIG00000011070)	ENSPTIG00000010576	ENSPTIG00000010278 #13	TLE2 (ENSPTIG00000008843) #15	ENSPTIG00000008105 ##16	ENSPTIG00000007808 #17	GNA15 (ENSPTIG00000006851) #18	CELF5 (ENSPTIG00000005338)	NFIC (ENSPTIG00000021743) #22	SMIM24 (ENSPTIG00000021624) #23	FZR1 (ENSPTIG00000021304) #25	HMG20B (ENSPTIG00000021062) #28	GIPC3 (ENSPTIG00000020400) #29	PIP5K1C (ENSPTIG00000018042) #32	MRPL54 (ENSPTIG00000017727) #35	ENSPTIG00000015790 #36	ATCAY (ENSPTIG00000013063)	EEF2 (ENSPTIG00000012837)	PIAS4 (ENSPTIG00000012378)	MAP2K2 (ENSPTIG00000010880)	CREB3L3 (ENSPTIG00000008650)	SIRT6 (ENSPTIG00000006083) #12	ANKRD24 (ENSPTIG00000021988) #11	EBI3 (ENSPTIG00000021918)
Panthera_a	ANCESTRAL SPECIES								ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
lion	MODERN SPECIES	215																NFIC (ENSPLOG00000017082) #22	SMIM24 (ENSPLOG00000017196) #23	FZR1 (ENSPLOG00000017310) #25	TEKTIP1 (ENSPLOG00000017373) #26	MFSD12 (ENSPLOG00000017502) #27	HMG20B (ENSPLOG00000017688) #28	GIPC3 (ENSPLOG00000017768) #29	ENSPLOG00000017823	TBXA2R (ENSPLOG00000017840) #30	CACTIN (ENSPLOG00000017867) #31	PIP5K1C (ENSPLOG00000017958) #32	TJP3 (ENSPLOG00000018107) #33	APBA3 (ENSPLOG00000018465) #34	MRPL54 (ENSPLOG00000018509) #35	RAX2 (ENSPLOG00000018549)	MATK (ENSPLOG00000018581) #36
leopard	MODERN SPECIES	134							ENSPPRG00000016426	TLE6 (ENSPPRG00000019807) #13	TLE2 (ENSPPRG00000024121) #15	TLE5 (ENSPPRG00000023990) #16	GNA11 (ENSPPRG00000023842) #17	GNA15 (ENSPPRG00000023476) #18	S1PR4 (ENSPPRG00000014630) #19	NCLN (ENSPPRG00000022717) #20	CELF5 (ENSPPRG00000001514)	NFIC (ENSPPRG00000002102) #22	SMIM24 (ENSPPRG00000002813) #23	SMIM44 (ENSPPRG00000003091)	DOHH (ENSPPRG00000003295) #24	FZR1 (ENSPPRG00000004528) #25	TEKTIP1 (ENSPPRG00000004778) #26	MFSD12 (ENSPPRG00000005281) #27	HMG20B (ENSPPRG00000005631) #28	GIPC3 (ENSPPRG00000006047) #29	TBXA2R (ENSPPRG00000006108) #30	CACTIN (ENSPPRG00000007007) #31	PIP5K1C (ENSPPRG00000010065) #32	TJP3 (ENSPPRG00000011837) #33	APBA3 (ENSPPRG00000012058) #34	MRPL54 (ENSPPRG00000012325) #35	RAX2 (ENSPPRG00000012460)
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00390000011698.c.a.c.b	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Suina	ANCESTRAL SPECIES	16	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.b	ENSGT00940000162830.a.a.a	ENSGT00950000182755.b.a.a.b.a.a	ENSGT01070000257262	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Chacoan peccary	MODERN SPECIES	770	DIRAS1 (ENSCWAG00000007888)	SLC39A3 (ENSCWAG00000007922)	SGTA (ENSCWAG00000007961)	THOP1 (ENSCWAG00000008013)	ENSCWAG00000008154	ZNF555 (ENSCWAG00000008231)	ENSCWAG00000008275	ENSCWAG00000008333 #13	TLE2 (ENSCWAG00000008524) #15	TLE5 (ENSCWAG00000009613) #16	GNA11 (ENSCWAG00000009699) #17	GNA15 (ENSCWAG00000009750) #18	S1PR4 (ENSCWAG00000009788) #19	NCLN (ENSCWAG00000009813) #20	CELF5 (ENSCWAG00000009942)	NFIC (ENSCWAG00000010134) #22	SMIM24 (ENSCWAG00000010463) #23	SMIM44 (ENSCWAG00000010490)	DOHH (ENSCWAG00000010524) #24	FZR1 (ENSCWAG00000010574) #25	TEKTIP1 (ENSCWAG00000010670) #26	MFSD12 (ENSCWAG00000010718) #27	HMG20B (ENSCWAG00000010811) #28	GIPC3 (ENSCWAG00000010858) #29	TBXA2R (ENSCWAG00000010917) #30	CACTIN (ENSCWAG00000010950) #31	PIP5K1C (ENSCWAG00000011001) #32	TJP3 (ENSCWAG00000011084) #33	APBA3 (ENSCWAG00000011492) #34	MRPL54 (ENSCWAG00000011519) #35	RAX2 (ENSCWAG00000011537)
Pig	MODERN SPECIES	10	ZNF554 (ENSSSCG00000038635)	ZNF555 (ENSSSCG00000013469)	ENSSSCG00000039774	ENSSSCG00000013471	ENSSSCG00000034545	ENSSSCG00000036792	ENSSSCG00000053447	ENSSSCG00000024588 #13	TLE2 (ENSSSCG00000028995) #15	TLE5 (ENSSSCG00000032265) #16	GNA11 (ENSSSCG00000029279) #17	GNA15 (ENSSSCG00000013473) #18	S1PR4 (ENSSSCG00000013474) #19	NCLN (ENSSSCG00000013475) #20	CELF5 (ENSSSCG00000013476)	NFIC (ENSSSCG00000036537) #22	ENSSSCG00000038067 #23	SMIM44 (ENSSSCG00000049629)	DOHH (ENSSSCG00000013478) #24	FZR1 (ENSSSCG00000013481) #25	TEKTIP1 (ENSSSCG00000056892) #26	MFSD12 (ENSSSCG00000026169) #27	HMG20B (ENSSSCG00000040421) #28	GIPC3 (ENSSSCG00000054746) #29	ENSSSCG00000063127	TBXA2R (ENSSSCG00000033759) #30	CACTIN (ENSSSCG00000032085) #31	ENSSSCG00000050486	PIP5K1C (ENSSSCG00000013490) #32	TJP3 (ENSSSCG00000013491) #33	APBA3 (ENSSSCG00000013492) #34
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00390000011698.c.a.c.b	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Camelidae	ANCESTRAL SPECIES	36	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000164119	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572
Arabian camel	MODERN SPECIES	14	DIRAS1 (ENSCDRG00005008559)	SLC39A3 (ENSCDRG00005008533)	SGTA (ENSCDRG00005008488)	THOP1 (ENSCDRG00005008423)	ZNF554 (ENSCDRG00005008395)	ZNF555 (ENSCDRG00005008365)	ENSCDRG00005008324	ENSCDRG00005008306	ENSCDRG00005008238 #13	TLE2 (ENSCDRG00005007388) #15	GNA11 (ENSCDRG00005007156) #17	GNA15 (ENSCDRG00005007101) #18	S1PR4 (ENSCDRG00005007083) #19	NCLN (ENSCDRG00005007008) #20	ENSCDRG00005006802	NFIC (ENSCDRG00005006280) #22	SMIM24 (ENSCDRG00005006203) #23	SMIM44 (ENSCDRG00005006180)	DOHH (ENSCDRG00005006155) #24	FZR1 (ENSCDRG00005006089) #25	TEKTIP1 (ENSCDRG00005006055) #26	MFSD12 (ENSCDRG00005005999) #27	HMG20B (ENSCDRG00005005967) #28	GIPC3 (ENSCDRG00005005946) #29	TBXA2R (ENSCDRG00005005933) #30	CACTIN (ENSCDRG00005005904) #31	PIP5K1C (ENSCDRG00005005583) #32	TJP3 (ENSCDRG00005005310) #33	APBA3 (ENSCDRG00005005256) #34	MRPL54 (ENSCDRG00005005240) #35	RAX2 (ENSCDRG00005005226)
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Pecora	ANCESTRAL SPECIES		ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Yarkand deer	MODERN SPECIES	32	DIRAS1 (ENSCHYG00000004359)	SLC39A3 (ENSCHYG00000004339)	SGTA (ENSCHYG00000004319)	THOP1 (ENSCHYG00000004286)	ZNF554 (ENSCHYG00000004250)	ZNF555 (ENSCHYG00000004235)	ENSCHYG00000004218	TLE6 (ENSCHYG00000004189) #13	ENSCHYG00000004147 #15	ENSCHYG00000004111 ##16	GNA11 (ENSCHYG00000004093) #17	GNA15 (ENSCHYG00000004083) #18	S1PR4 (ENSCHYG00000004078) #19	NCLN (ENSCHYG00000004043) #20	CELF5 (ENSCHYG00000004001)	NFIC (ENSCHYG00000003885) #22	SMIM24 (ENSCHYG00000003795) #23	ENSCHYG00000003765 #24	FZR1 (ENSCHYG00000003667) #25	ENSCHYG00000003615 #26	MFSD12 (ENSCHYG00000003571) #27	HMG20B (ENSCHYG00000003538) #28	GIPC3 (ENSCHYG00000003521) #29	TBXA2R (ENSCHYG00000003508) #30	CACTIN (ENSCHYG00000003483) #31	PIP5K1C (ENSCHYG00000003264) #32	TJP3 (ENSCHYG00000003169) #33	APBA3 (ENSCHYG00000003126) #34	RAX2 (ENSCHYG00000003107)	MATK (ENSCHYG00000003016) #36	MRPL54 (ENSCHYG00000002977) #35
Percora_a	ANCESTRAL SPECIES		ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00520000060565	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
Siberian musk deer	MODERN SPECIES	99	SLC39A3 (ENSMMSG00000001047)	SGTA (ENSMMSG00000001020)	THOP1 (ENSMMSG00000000968)	ZNF554 (ENSMMSG00000000944)	ZNF555 (ENSMMSG00000000926)	ENSMMSG00000000907	ENSMMSG00000000894	ENSMMSG00000000868 #13	TLE2 (ENSMMSG00000000627) #15	TLE5 (ENSMMSG00000000569) #16	GNA11 (ENSMMSG00000000551) #17	GNA15 (ENSMMSG00000000532) #18	S1PR4 (ENSMMSG00000000524) #19	NCLN (ENSMMSG00000000514) #20	CELF5 (ENSMMSG00000000449)	NFIC (ENSMMSG00000000253) #22	ENSMMSG00000000182	SMIM44 (ENSMMSG00000000172)	ENSMMSG00000000156	DOHH (ENSMMSG00000000141) #24	FZR1 (ENSMMSG00000000085) #25	TEKTIP1 (ENSMMSG00000000060) #26	MFSD12 (ENSMMSG00000000043) #27	HMG20B (ENSMMSG00000000025) #28	GIPC3 (ENSMMSG00000023147) #29	TBXA2R (ENSMMSG00000023142) #30	ENSMMSG00000023139	CACTIN (ENSMMSG00000023129) #31	PIP5K1C (ENSMMSG00000023101) #32	TJP3 (ENSMMSG00000023025) #33	APBA3 (ENSMMSG00000023004) #34
Bovidae	ANCESTRAL SPECIES		ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572	ENSGT00940000160775 #36
Goat	MODERN SPECIES	26	SLC39A3 (ENSCHIG00000019215)	SGTA (ENSCHIG00000025763)	THOP1 (ENSCHIG00000013949)	ZNF554 (ENSCHIG00000021466)	ZNF555 (ENSCHIG00000013462)	ENSCHIG00000013771	ENSCHIG00000011999	TLE6 (ENSCHIG00000018660) #13	TLE2 (ENSCHIG00000026991) #15	TLE5 (ENSCHIG00000012967) #16	GNA11 (ENSCHIG00000012068) #17	GNA15 (ENSCHIG00000006621) #18	S1PR4 (ENSCHIG00000012284) #19	NCLN (ENSCHIG00000021992) #20	CELF5 (ENSCHIG00000004008)	NFIC (ENSCHIG00000015364) #22	SMIM24 (ENSCHIG00000016053) #23	DOHH (ENSCHIG00000023284) #24	FZR1 (ENSCHIG00000014824) #25	MFSD12 (ENSCHIG00000024505) #27	TEKTIP1 (ENSCHIG00000012701) #26	HMG20B (ENSCHIG00000023604) #28	GIPC3 (ENSCHIG00000018804) #29	TBXA2R (ENSCHIG00000012747) #30	CACTIN (ENSCHIG00000026750) #31	PIP5K1C (ENSCHIG00000022491) #32	TJP3 (ENSCHIG00000017841) #33	APBA3 (ENSCHIG00000014574) #34	MRPL54 (ENSCHIG00000026538) #35	RAX2 (ENSCHIG00000020868)	MATK (ENSCHIG00000014576) #36
Rambouillet Sheep	MODERN SPECIES	21	DIRAS1 (ENSOARG00020021668)	SLC39A3 (ENSOARG00020021617)	SGTA (ENSOARG00020021585)	THOP1 (ENSOARG00020021465)	ZNF554 (ENSOARG00020021423)	ZNF555 (ENSOARG00020021394)	ENSOARG00020021357	ENSOARG00020021289 #13	TLE2 (ENSOARG00020020198) #15	TLE5 (ENSOARG00020020135) #16	GNA11 (ENSOARG00020020092) #17	GNA15 (ENSOARG00020020045) #18	S1PR4 (ENSOARG00020020029) #19	NCLN (ENSOARG00020019971) #20	CELF5 (ENSOARG00020019796)	NFIC (ENSOARG00020019406) #22	SMIM24 (ENSOARG00020019336) #23	DOHH (ENSOARG00020019251) #24	FZR1 (ENSOARG00020019125) #25	TEKTIP1 (ENSOARG00020019053) #26	MFSD12 (ENSOARG00020018933) #27	HMG20B (ENSOARG00020018879) #28	GIPC3 (ENSOARG00020018810) #29	TBXA2R (ENSOARG00020018783) #30	CACTIN (ENSOARG00020018654) #31	PIP5K1C (ENSOARG00020017829) #32	TJP3 (ENSOARG00020017288) #33	APBA3 (ENSOARG00020017206) #34	MRPL54 (ENSOARG00020017174) #35	RAX2 (ENSOARG00020017140)	MATK (ENSOARG00020017085) #36
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00960000187413	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33
American bison	MODERN SPECIES	3349	GNG7 (ENSBBBG00000023928)	DIRAS1 (ENSBBBG00000023894)	SLC39A3 (ENSBBBG00000000305)	SGTA (ENSBBBG00000023876)	THOP1 (ENSBBBG00000023819)	ZNF554 (ENSBBBG00000023794)	ZNF555 (ENSBBBG00000023789)	ENSBBBG00000023769 #13	TLE2 (ENSBBBG00000023745) #15	TLE5 (ENSBBBG00000023655) #16	GNA11 (ENSBBBG00000006176) #17	GNA15 (ENSBBBG00000006167) #18	S1PR4 (ENSBBBG00000023601) #19	NCLN (ENSBBBG00000023582) #20	ENSBBBG00000008686 #21	NFIC (ENSBBBG00000023432) #22	SMIM24 (ENSBBBG00000023341) #23	SMIM44 (ENSBBBG00000023332)	DOHH (ENSBBBG00000008411) #24	ENSBBBG00000023317	FZR1 (ENSBBBG00000023304) #25	TEKTIP1 (ENSBBBG00000023231) #26	MFSD12 (ENSBBBG00000023220) #27	HMG20B (ENSBBBG00000023190) #28	GIPC3 (ENSBBBG00000000334) #29	TBXA2R (ENSBBBG00000000372) #30	CACTIN (ENSBBBG00000000388) #31	PIP5K1C (ENSBBBG00000000451) #32	TJP3 (ENSBBBG00000023169) #33	APBA3 (ENSBBBG00000006868) #34	MRPL54 (ENSBBBG00000023057) #35
Bos	ANCESTRAL SPECIES	3	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00960000187413	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Bos_a	ANCESTRAL SPECIES	2	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163572	ENSGT00940000160775 #36
Wild yak	MODERN SPECIES	144	SLC39A3 (ENSBMUG00000013351)	SGTA (ENSBMUG00000013321)	THOP1 (ENSBMUG00000013288)	ZNF554 (ENSBMUG00000013275)	ZNF555 (ENSBMUG00000013266)	ENSBMUG00000013233	ENSBMUG00000013196 #13	TLE2 (ENSBMUG00000013141) #15	TLE5 (ENSBMUG00000012985) #16	GNA11 (ENSBMUG00000012972) #17	GNA15 (ENSBMUG00000012918) #18	S1PR4 (ENSBMUG00000012890) #19	NCLN (ENSBMUG00000012866) #20	CELF5 (ENSBMUG00000012845)	ENSBMUG00000012820	NFIC (ENSBMUG00000012806) #22	ENSBMUG00000012785 #23	DOHH (ENSBMUG00000012771) #24	FZR1 (ENSBMUG00000012724) #25	TEKTIP1 (ENSBMUG00000012671) #26	MFSD12 (ENSBMUG00000012651) #27
Domestic yak	DUPLICATION
Domestic yak	MODERN SPECIES	27	SGTA (ENSBGRG00000001178)	ENSBGRG00000001155	THOP1 (ENSBGRG00000001102)	ZNF554 (ENSBGRG00000001093)	ZNF555 (ENSBGRG00000001084)	ENSBGRG00000001060	ENSBGRG00000001055	TLE6 (ENSBGRG00000001034) #13	TLE2 (ENSBGRG00000000857) #15	TLE5 (ENSBGRG00000000793) #16	GNA11 (ENSBGRG00000000769) #17	GNA15 (ENSBGRG00000000748) #18	S1PR4 (ENSBGRG00000000735) #19	NCLN (ENSBGRG00000000641) #20	CELF5 (ENSBGRG00000000565)	ENSBGRG00000000535 #22	ENSBGRG00000000421 #22	ENSBGRG00000000370 #23	DOHH (ENSBGRG00000021664) #24	FZR1 (ENSBGRG00000021298) #25	TEKTIP1 (ENSBGRG00000021216) #26	MFSD12 (ENSBGRG00000021107) #27	HMG20B (ENSBGRG00000021064) #28	GIPC3 (ENSBGRG00000021004) #29	TBXA2R (ENSBGRG00000020972) #30	CACTIN (ENSBGRG00000020942) #31	PIP5K1C (ENSBGRG00000020521) #32	TJP3 (ENSBGRG00000019950) #33	APBA3 (ENSBGRG00000019857) #34	MRPL54 (ENSBGRG00000019811) #35	RAX2 (ENSBGRG00000019785)
Domestic yak	MODERN SPECIES	27	ENSBGRG00000001155	THOP1 (ENSBGRG00000001102)	ZNF554 (ENSBGRG00000001093)	ZNF555 (ENSBGRG00000001084)	ENSBGRG00000001060	ENSBGRG00000001055	TLE6 (ENSBGRG00000001034) #13	TLE2 (ENSBGRG00000000857) #15	TLE5 (ENSBGRG00000000793) #16	GNA11 (ENSBGRG00000000769) #17	GNA15 (ENSBGRG00000000748) #18	S1PR4 (ENSBGRG00000000735) #19	NCLN (ENSBGRG00000000641) #20	CELF5 (ENSBGRG00000000565)	ENSBGRG00000000535 #22	ENSBGRG00000000421 #22	ENSBGRG00000000370 #23	DOHH (ENSBGRG00000021664) #24	FZR1 (ENSBGRG00000021298) #25	TEKTIP1 (ENSBGRG00000021216) #26	MFSD12 (ENSBGRG00000021107) #27	HMG20B (ENSBGRG00000021064) #28	GIPC3 (ENSBGRG00000021004) #29	TBXA2R (ENSBGRG00000020972) #30	CACTIN (ENSBGRG00000020942) #31	PIP5K1C (ENSBGRG00000020521) #32	TJP3 (ENSBGRG00000019950) #33	APBA3 (ENSBGRG00000019857) #34	MRPL54 (ENSBGRG00000019811) #35	RAX2 (ENSBGRG00000019785)	MATK (ENSBGRG00000019523) #36
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000185200	ENSGT00950000182916.a.a #22	ENSGT00950000185935	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00960000187413	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Hybrid Bos Indicus	MODERN SPECIES	26	SLC39A3 (ENSBIXG00005016121)	ENSBIXG00005002558	SGTA (ENSBIXG00005016070)	THOP1 (ENSBIXG00005016046)	ZNF554 (ENSBIXG00005002533)	ZNF555 (ENSBIXG00005015972)	ENSBIXG00005015965	ENSBIXG00005015961	TLE6 (ENSBIXG00005002519) #13	TLE2 (ENSBIXG00005015910) #15	TLE5 (ENSBIXG00005015803) #16	GNA11 (ENSBIXG00005002462) #17	GNA15 (ENSBIXG00005002453) #18	S1PR4 (ENSBIXG00005015709) #19	NCLN (ENSBIXG00005002433) #20	NFIC (ENSBIXG00005002308) #22	ENSBIXG00005015296	SMIM24 (ENSBIXG00005015291) #23	DOHH (ENSBIXG00005015281) #24	ENSBIXG00005015258	FZR1 (ENSBIXG00005006231) #25	TEKTIP1 (ENSBIXG00005015154) #26	MFSD12 (ENSBIXG00005015129) #27	HMG20B (ENSBIXG00005015091) #28	GIPC3 (ENSBIXG00005002213) #29	TBXA2R (ENSBIXG00005015046) #30	CACTIN (ENSBIXG00005002202) #31	PIP5K1C (ENSBIXG00005014985) #32	TJP3 (ENSBIXG00005002143) #33	APBA3 (ENSBIXG00005005496) #34	MRPL54 (ENSBIXG00005014674) #35
Cow	MODERN SPECIES	26	THOP1 (ENSBTAG00000020446)	ZNF554 (ENSBTAG00000031352)	ZNF555 (ENSBTAG00000008397)	ENSBTAG00000012868	TLE6 (ENSBTAG00000001152) #13	TLE2 (ENSBTAG00000001153) #15	TLE5 (ENSBTAG00000031363) #16	GNA11 (ENSBTAG00000012181) #17	GNA15 (ENSBTAG00000019988) #18	S1PR4 (ENSBTAG00000000381) #19	NCLN (ENSBTAG00000020759) #20	CELF5 (ENSBTAG00000021774)	ENSBTAG00000054212	ENSBTAG00000051439	ENSBTAG00000049701	NFIC (ENSBTAG00000008520) #22	ENSBTAG00000054259	SMIM24 (ENSBTAG00000031383) #23	DOHH (ENSBTAG00000005272) #24	ENSBTAG00000051400	FZR1 (ENSBTAG00000031387) #25	TEKTIP1 (ENSBTAG00000014982) #26	MFSD12 (ENSBTAG00000014979) #27	HMG20B (ENSBTAG00000008789) #28	GIPC3 (ENSBTAG00000050809) #29	ENSBTAG00000053812	TBXA2R (ENSBTAG00000014944) #30	CACTIN (ENSBTAG00000010373) #31	PIP5K1C (ENSBTAG00000000710) #32	TJP3 (ENSBTAG00000018342) #33	APBA3 (ENSBTAG00000008395) #34
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000162148 #37	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00950000183005.b.d
Blue whale	MODERN SPECIES	14	ZFR2 (ENSBMSG00010006830) #37	ZNF555 (ENSBMSG00010007047)	ENSBMSG00010007074	ENSBMSG00010007090	ENSBMSG00010007121	ENSBMSG00010007140	ENSBMSG00010007156	ENSBMSG00010007176 #13	TLE2 (ENSBMSG00010007244) #15	TLE5 (ENSBMSG00010007577) #16	GNA11 (ENSBMSG00010007614) #17	GNA15 (ENSBMSG00010007638) #18	S1PR4 (ENSBMSG00010007650) #19	NCLN (ENSBMSG00010007666) #20	CELF5 (ENSBMSG00010007695)	NFIC (ENSBMSG00010007764) #22	ENSBMSG00010007983 #23	DOHH (ENSBMSG00010008048) #24	FZR1 (ENSBMSG00010008072) #25	MFSD12 (ENSBMSG00010008150) #27	HMG20B (ENSBMSG00010008175) #28	GIPC3 (ENSBMSG00010008191) #29	TBXA2R (ENSBMSG00010008203) #30	CACTIN (ENSBMSG00010008209) #31	PIP5K1C (ENSBMSG00010008234) #32	TJP3 (ENSBMSG00010008320) #33	APBA3 (ENSBMSG00010008350) #34	MRPL54 (ENSBMSG00010008367) #35	MBD3 (ENSBMSG00010008380)	TCF3 (ENSBMSG00010008426)	ONECUT3 (ENSBMSG00010008489)
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000162148 #37	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00950000183005.b.d
Sperm whale	MODERN SPECIES	11	SIRT6 (ENSPCTG00005016278) #12	CREB3L3 (ENSPCTG00005016528)	PIAS4 (ENSPCTG00005016559)	EEF2 (ENSPCTG00005016617)	DAPK3 (ENSPCTG00005016679)	NMRK2 (ENSPCTG00005016732)	ATCAY (ENSPCTG00005016906)	ENSPCTG00005016973 #37	ENSPCTG00005017007 #37	MATK (ENSPCTG00005017055) #36	RAX2 (ENSPCTG00005017465)	ENSPCTG00005017499	ZNF555 (ENSPCTG00005017508)	ENSPCTG00005017562	ENSPCTG00005017573	NFIC (ENSPCTG00005017610) #22	SMIM24 (ENSPCTG00005017813) #23	DOHH (ENSPCTG00005017916) #24	ENSPCTG00005017955	TLE5 (ENSPCTG00005018020) #16	TLE2 (ENSPCTG00005018210) #15	PIP5K1C (ENSPCTG00005019009) #32	ENSPCTG00005019154	ENSPCTG00005019177	APBA3 (ENSPCTG00005019206) #34	MRPL54 (ENSPCTG00005019236) #35	MBD3 (ENSPCTG00005019289)	ENSPCTG00005019396	TCF3 (ENSPCTG00005019427)	ONECUT3 (ENSPCTG00005019483)	KLF16 (ENSPCTG00005019503)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000162148 #37	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282.d #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00950000183005.b.d
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162148 #37	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282.d #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00950000183005.b.d
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000162148 #37	ENSGT00940000160775 #36	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161033 #17	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT00940000154660.a #23	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282.d #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00950000183005.b.d
Narwhal	MODERN SPECIES	298	ZFR2 (ENSMMNG00015002202) #37	MATK (ENSMMNG00015002087) #36	RAX2 (ENSMMNG00015002052)	ZNF555 (ENSMMNG00015002028)	ENSMMNG00015002004	ENSMMNG00015001988	ENSMMNG00015001966	ENSMMNG00015001925 #13	TLE2 (ENSMMNG00015001829) #15	TLE5 (ENSMMNG00015001757) #16	GNA11 (ENSMMNG00015001728) #17	GNA15 (ENSMMNG00015001704) #18	S1PR4 (ENSMMNG00015001684) #19	NCLN (ENSMMNG00015001627) #20	CELF5 (ENSMMNG00015001491)	NFIC (ENSMMNG00015001309) #22	SMIM24 (ENSMMNG00015001179) #23	DOHH (ENSMMNG00015001138) #24	FZR1 (ENSMMNG00015001082) #25	TEKTIP1 (ENSMMNG00015001041) #26	MFSD12 (ENSMMNG00015000990) #27	HMG20B (ENSMMNG00015000925) #28	GIPC3 (ENSMMNG00015000888) #29	ENSMMNG00015000865	TBXA2R (ENSMMNG00015000841) #30	CACTIN (ENSMMNG00015000805) #31	PIP5K1C (ENSMMNG00015000718) #32	TJP3 (ENSMMNG00015000585) #33	APBA3 (ENSMMNG00015000514) #34	MRPL54 (ENSMMNG00015000490) #35	MBD3 (ENSMMNG00015000454)
Beluga whale	MODERN SPECIES	62	RAX2 (ENSDLEG00000020322)	ZNF555 (ENSDLEG00000020325)	ENSDLEG00000020329	ENSDLEG00000020333	ENSDLEG00000020335	ENSDLEG00000020339 #13	ENSDLEG00000020344 #15	ENSDLEG00000020351 #15	AES (ENSDLEG00000020354) #16	GNA11 (ENSDLEG00000020358) #17	GNA15 (ENSDLEG00000020362) #18	S1PR4 (ENSDLEG00000020368) #19	NCLN (ENSDLEG00000020375) #20	ENSDLEG00000020390 #21	ENSDLEG00000020396	NFIC (ENSDLEG00000020401) #22	ENSDLEG00000020426 #23	DOHH (ENSDLEG00000020431) #24	FZR1 (ENSDLEG00000020434) #25	ENSDLEG00000015356 #26	MFSD12 (ENSDLEG00000015360) #27	HMG20B (ENSDLEG00000015376) #28	GIPC3 (ENSDLEG00000015384) #29	TBXA2R (ENSDLEG00000015397) #30	CACTIN (ENSDLEG00000015406) #31	PIP5K1C (ENSDLEG00000015428) #32	TJP3 (ENSDLEG00000015460) #33	APBA3 (ENSDLEG00000015494) #34	MRPL54 (ENSDLEG00000015510) #35	MBD3 (ENSDLEG00000015523)	ENSDLEG00000015534
Vaquita	MODERN SPECIES	14	RAX2 (ENSPSNG00000011818)	ZNF555 (ENSPSNG00000011767)	ENSPSNG00000011752	ENSPSNG00000011739	ENSPSNG00000011716	ENSPSNG00000011693	TLE6 (ENSPSNG00000011672) #13	TLE2 (ENSPSNG00000011350) #15	TLE5 (ENSPSNG00000011246) #16	GNA11 (ENSPSNG00000011201) #17	GNA15 (ENSPSNG00000011159) #18	S1PR4 (ENSPSNG00000011138) #19	NCLN (ENSPSNG00000011058) #20	CELF5 (ENSPSNG00000010809)	SMIM24 (ENSPSNG00000010742) #23	NFIC (ENSPSNG00000010514) #22	DOHH (ENSPSNG00000010352) #24	FZR1 (ENSPSNG00000010251) #25	TEKTIP1 (ENSPSNG00000010156) #26	MFSD12 (ENSPSNG00000009980) #27	HMG20B (ENSPSNG00000009908) #28	GIPC3 (ENSPSNG00000009792) #29	ENSPSNG00000009640	TBXA2R (ENSPSNG00000019240) #30	CACTIN (ENSPSNG00000019192) #31	PIP5K1C (ENSPSNG00000019044) #32	TJP3 (ENSPSNG00000018690) #33	APBA3 (ENSPSNG00000018571) #34	MRPL54 (ENSPSNG00000018508) #35	MBD3 (ENSPSNG00000018406)	TCF3 (ENSPSNG00000018208)
Dolphin	MODERN SPECIES	1354															CELF5 (ENSTTRG00000009625)	NFIC (ENSTTRG00000009660) #22	SMIM44 (ENSTTRG00000009690)	DOHH (ENSTTRG00000009703) #24
Atlantogenata	ANCESTRAL SPECIES	79									ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161736 #18	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Xenarthra	ANCESTRAL SPECIES																	ENSGT00950000182916.a.a #22
Sloth	MODERN SPECIES	3470																ENSCHOG00000006447 #22
Armadillo	MODERN SPECIES	3441																NFIC (ENSDNOG00000042450) #22
Afrotheria	ANCESTRAL SPECIES	97								ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161736 #18	ENSGT00940000161033 #17	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Tenrec	MODERN SPECIES	3791																NFIC (ENSETEG00000006952) #22
Afrotheria_a	ANCESTRAL SPECIES	101								ENSGT01030000234519.e.a.a.b.a.a.a #13	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #16	ENSGT00940000161736 #18	ENSGT00940000161033 #17	ENSGT01050000244887.B #19	ENSGT00500000044945.a #20	ENSGT00940000154201.a.a.b.d	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT00730000111899	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.A.a #31	ENSGT00940000159258 #32	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35
Hyrax	MODERN SPECIES	3109																ENSPCAG00000002205 #22
Elephant	MODERN SPECIES	60										ENSLAFG00000022423 #13	TLE2 (ENSLAFG00000007679) #15	GNA11 (ENSLAFG00000011237) #17	S1PR4 (ENSLAFG00000000780) #19	NCLN (ENSLAFG00000028713) #20	CELF5 (ENSLAFG00000026387)	NFIC (ENSLAFG00000007134) #22	ENSLAFG00000029999	SMIM44 (ENSLAFG00000026671)	DOHH (ENSLAFG00000011920) #24	FZR1 (ENSLAFG00000029400) #25	TEKTIP1 (ENSLAFG00000032270) #26	MFSD12 (ENSLAFG00000031512) #27	HMG20B (ENSLAFG00000007845) #28	GIPC3 (ENSLAFG00000007849) #29	ENSLAFG00000030325	TBXA2R (ENSLAFG00000027874) #30	ENSLAFG00000031774 #31	PIP5K1C (ENSLAFG00000022484) #32	TJP3 (ENSLAFG00000027222) #33	APBA3 (ENSLAFG00000015080) #34	MRPL54 (ENSLAFG00000029657) #35
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a	ENSGT00390000012198	ENSGT00410000025695.a	ENSGT00390000012913.a	ENSGT00940000160926	ENSGT00940000158649	ENSGT00390000017748	ENSGT00940000160753	ENSGT00390000014856	ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00390000001450.h.a.b.b	ENSGT00940000160036 #33	ENSGT00940000160384 #34	ENSGT00390000001201 #35	ENSGT00940000163917.b
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a	ENSGT00390000012198	ENSGT00410000025695.a	ENSGT00390000012913.a	ENSGT00940000160926	ENSGT00940000158649	ENSGT00390000017748	ENSGT00940000160753	ENSGT00390000014856	ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00390000001450.h.a.b.b	ENSGT00940000154650.d.f.d.a.a	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Tasmanian devil	MODERN SPECIES		ENSSHAG00000024947	ENSSHAG00000004029	ENSSHAG00000022278	ENSSHAG00000003518	TSSK6 (ENSSHAG00000001334)	NDUFA13 (ENSSHAG00000031151)	GATAD2A (ENSSHAG00000013178)	MAU2 (ENSSHAG00000012602)	SUGP1 (ENSSHAG00000012361)	TM6SF2 (ENSSHAG00000012199)	HAPLN4 (ENSSHAG00000012102)	ENSSHAG00000011784	ENSSHAG00000026063	ENSSHAG00000031648	ENSSHAG00000010759	ENSSHAG00000008822 #22	DOHH (ENSSHAG00000008794) #24	FZR1 (ENSSHAG00000007954) #25	MFSD12 (ENSSHAG00000007626) #27	HMG20B (ENSSHAG00000007226) #28	TBXA2R (ENSSHAG00000006677) #30	ENSSHAG00000006050 ##31	PIP5K1C (ENSSHAG00000004499) #32	ENSSHAG00000027582	ENSSHAG00000030933	ENSSHAG00000030563	ENSSHAG00000024272	TJP3 (ENSSHAG00000001439) #33	APBA3 (ENSSHAG00000002223) #34	MRPL54 (ENSSHAG00000002557) #35	ENSSHAG00000003118
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a	ENSGT00390000012198	ENSGT00410000025695.a	ENSGT00390000012913.a	ENSGT00940000160926	ENSGT00940000158649	ENSGT00390000017748	ENSGT00940000160753	ENSGT00390000014856	ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00390000001450.h.a.b.b	ENSGT00940000154650.d.f.d.a.a	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Wallaby	MODERN SPECIES	4923																ENSMEUG00000010629 #22
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a	ENSGT00390000012198	ENSGT00410000025695.a	ENSGT00390000012913.a	ENSGT00940000160926	ENSGT00940000158649	ENSGT00390000017748	ENSGT00940000160753.a	ENSGT00390000014856	ENSGT00940000154929.B	ENSGT00950000182916.a.a #22	ENSGT01000000216439	ENSGT00500000044957 #24	ENSGT00950000183104.B.a.a #25	ENSGT00390000004282 #26	ENSGT00390000005318.a #27	ENSGT00940000161213 #28	ENSGT00390000003420.b #29	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##31	ENSGT00940000159258 #32	ENSGT00390000001450.h.a.b.b	ENSGT00940000154650.d.f.d.a.a	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000160036 #33	ENSGT00940000160384 #34
Common wonbat	MODERN SPECIES	580	ENSVURG00010024841	ENSVURG00010024840	CILP2 (ENSVURG00010024838)	YJEFN3 (ENSVURG00010024837)	NDUFA13 (ENSVURG00010024836)	TSSK6 (ENSVURG00010024835)	GATAD2A (ENSVURG00010024834)	SUGP1 (ENSVURG00010024831)	TM6SF2 (ENSVURG00010024830)	HAPLN4 (ENSVURG00010024829)	ENSVURG00010024827	ENSVURG00010024825	RFXANK (ENSVURG00010024824)	BORCS8 (ENSVURG00010024823)	ENSVURG00010024799	ENSVURG00010024784 #22	DOHH (ENSVURG00010024782) #24	FZR1 (ENSVURG00010024780) #25	TEKTIP1 (ENSVURG00010024778) #26	MFSD12 (ENSVURG00010024773) #27	HMG20B (ENSVURG00010024769) #28	GIPC3 (ENSVURG00010024764) #29	TBXA2R (ENSVURG00010024759) #30	ENSVURG00010024755 ##31	PIP5K1C (ENSVURG00010024749) #32	ENSVURG00010024743	ENSVURG00010024741	ENSVURG00010024739	ENSVURG00010024737	TJP3 (ENSVURG00010024727) #33	APBA3 (ENSVURG00010024720) #34
koala	MODERN SPECIES	190	ENSPCIG00000032437	ENSPCIG00000027489	CILP2 (ENSPCIG00000024194)	YJEFN3 (ENSPCIG00000024192)	NDUFA13 (ENSPCIG00000024191)	GATAD2A (ENSPCIG00000024189)	MAU2 (ENSPCIG00000024186)	SUGP1 (ENSPCIG00000031015)	TM6SF2 (ENSPCIG00000024217)	HAPLN4 (ENSPCIG00000024218)	NCAN (ENSPCIG00000024219)	NR2C2AP (ENSPCIG00000024227)	ENSPCIG00000024222	BORCS8 (ENSPCIG00000024230)	ENSPCIG00000024267	ENSPCIG00000025322 #22	ENSPCIG00000033895	DOHH (ENSPCIG00000025326) #24	FZR1 (ENSPCIG00000025330) #25	ENSPCIG00000033355 #26	MFSD12 (ENSPCIG00000025337) #27	HMG20B (ENSPCIG00000025343) #28	GIPC3 (ENSPCIG00000025355) #29	TBXA2R (ENSPCIG00000025359) #30	ENSPCIG00000025362 ##31	ENSPCIG00000025367 #32	ENSPCIG00000035426	ENSPCIG00000014668	ENSPCIG00000032694
Opossum	MODERN SPECIES	2	ENSMODG00000007234	CILP2 (ENSMODG00000007229)	YJEFN3 (ENSMODG00000007212)	NDUFA13 (ENSMODG00000007201)	TSSK6 (ENSMODG00000023787)	GATAD2A (ENSMODG00000007189)	MAU2 (ENSMODG00000007162)	SUGP1 (ENSMODG00000007089)	TM6SF2 (ENSMODG00000007077)	HAPLN4 (ENSMODG00000007055)	ENSMODG00000028358	NR2C2AP (ENSMODG00000047700)	RFXANK (ENSMODG00000007002)	BORCS8 (ENSMODG00000006986)	ENSMODG00000006976	NFIC (ENSMODG00000006935) #22	DOHH (ENSMODG00000006927) #24	FZR1 (ENSMODG00000006919) #25	ENSMODG00000047578 #26	MFSD12 (ENSMODG00000006897) #27	HMG20B (ENSMODG00000006884) #28	ENSMODG00000006869 #29	TBXA2R (ENSMODG00000006844) #30	ENSMODG00000006837 ##31	ENSMODG00000006823 #32	ENSMODG00000050748	ENSMODG00000023793	ENSMODG00000023794	ENSMODG00000006773	ENSMODG00000046640	ENSMODG00000045793
Platypus	MODERN SPECIES	85	CSNK1G2 (ENSOANG00000009333)	BTBD2 (ENSOANG00000041316)	ENSOANG00000042189	ENSOANG00000039838	ABHD17A (ENSOANG00000036622)	ENSOANG00000042009	REXO1 (ENSOANG00000036110)	ENSOANG00000014921	ONECUT3 (ENSOANG00000004576)	TCF3 (ENSOANG00000014335)	UQCR11 (ENSOANG00000003834)	ENSOANG00000003672	MEX3D (ENSOANG00000011764)	ENSOANG00000037185	ENSOANG00000046986	NFIC (ENSOANG00000042636) #22	ENSOANG00000043849	DOHH (ENSOANG00000041341) #24	FZR1 (ENSOANG00000007656) #25	ENSOANG00000015682 #26	ENSOANG00000014325 #27	HMG20B (ENSOANG00000013515) #28	TBXA2R (ENSOANG00000037569) #30	PIP5K1C (ENSOANG00000006295) #32	TJP3 (ENSOANG00000006294) #33	APBA3 (ENSOANG00000006293) #34	ENSOANG00000037708 #35	MATK (ENSOANG00000010674) #36	ENSOANG00000011220 #37	ATCAY (ENSOANG00000006292)	NMRK2 (ENSOANG00000035130)