Euteleostomi	ANCESTRAL SPECIES	70	ENSGT00940000157702	ENSGT00940000162230	ENSGT00390000013040	ENSGT00390000011509	ENSGT00390000008732.b	ENSGT00940000159569 #25	ENSGT00940000168178	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000157685 #24	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000154687.B #20	ENSGT00950000183101.a.b.b #19	ENSGT00940000156261 #18	ENSGT00940000158540 #17	ENSGT00940000159990 #15	ENSGT00940000157419 #16
Sarcopterygii	ANCESTRAL SPECIES	71							ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000154687.B #20	ENSGT00950000183101.a.b.b #19	ENSGT00940000156261 #18	ENSGT00940000158540 #17	ENSGT00940000159990 #15	ENSGT00940000157419 #16	ENSGT01060000248575.C	ENSGT00940000161534 #14	ENSGT00940000153391.c.b.a #13	ENSGT00940000157936 #12	ENSGT00940000157194 #11
Tetrapoda	ANCESTRAL SPECIES	58							ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000154687.B #20	ENSGT00950000183101.a.b.b #19	ENSGT00940000156261 #18	ENSGT00940000158540 #17	ENSGT00940000159990 #15	ENSGT00940000157419 #16	ENSGT01060000248575.C	ENSGT00940000161534 #14	ENSGT00940000153391.c.b.a #13	ENSGT00940000157936 #12	ENSGT00940000157194 #11
Amniota	ANCESTRAL SPECIES	27	ENSGT00940000158501 #8	ENSGT00390000016384 #9	ENSGT00940000172233	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B	ENSGT01030000234614.B.a.a.a #36
Mammalia	ANCESTRAL SPECIES	23	ENSGT00940000158501 #8	ENSGT00390000016384 #9	ENSGT00940000172233	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B	ENSGT01030000234614.B.a.a.a #36
Theria	ANCESTRAL SPECIES	23	ENSGT00940000158501 #8	ENSGT00390000016384 #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00930000151076	ENSGT00940000162508	ENSGT00940000163103	ENSGT00730000111617	ENSGT00940000164886	ENSGT00390000010743.b #27	ENSGT00910000145076
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Primates	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000167867	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000167867	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000167867	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000164453	ENSGT00940000163027	ENSGT00390000010743.b #27	ENSGT00910000145076.a	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00910000147054	ENSGT00940000156868 #30	ENSGT00390000018089 #31
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000162508	ENSGT00940000163027	ENSGT00390000010743.b #27	ENSGT00910000145076.a	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00910000147766	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000162508	ENSGT00940000163027	ENSGT00390000010743.b #27	ENSGT00910000145076.a	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00910000147766	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076.a	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34
Olive baboon	MODERN SPECIES	4	GOLGA1 (ENSPANG00000017415) #7	ARPC5L (ENSPANG00000044193) #8	RPL35 (ENSPANG00000032631) #9	WDR38 (ENSPANG00000007029) #10	OLFML2A (ENSPANG00000025860) #11	NR6A1 (ENSPANG00000025861) #12	NR5A1 (ENSPANG00000025862) #13	ADGRD2 (ENSPANG00000025863) #14	NEK6 (ENSPANG00000025854) #15	PSMB7 (ENSPANG00000025855) #16	LHX2 (ENSPANG00000025852) #17	DENND1A (ENSPANG00000025853) #18	CRB2 (ENSPANG00000025851) #19	STRBP (ENSPANG00000025850) #20	RABGAP1 (ENSPANG00000025838) #21	ZBTB26 (ENSPANG00000025839) #22	ZBTB6 (ENSPANG00000016323) #23	RC3H2 (ENSPANG00000025840) #24	PDCL (ENSPANG00000033400) #25	OR5C1 (ENSPANG00000049750) #26	PTGS1 (ENSPANG00000025843) #27	MRRF (ENSPANG00000025844) #28	RBM18 (ENSPANG00000025845) #29	LHX6 (ENSPANG00000025837) #30	MORN5 (ENSPANG00000034028) #31	NDUFA8 (ENSPANG00000042514) #32	TTLL11 (ENSPANG00000025827) #33	DAB2IP (ENSPANG00000025828) #34	ENSPANG00000025829 #35	STOM (ENSPANG00000025830) #36	GSN (ENSPANG00000025832) #37
Cercopithecinae_d	ANCESTRAL SPECIES	56	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00910000147766	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT00940000165463	ENSGT00940000164453
Sooty mangabey	MODERN SPECIES	489	WDR38 (ENSCATG00000041965) #10	OLFML2A (ENSCATG00000026827) #11	NR6A1 (ENSCATG00000030436) #12	NR5A1 (ENSCATG00000032967) #13	ADGRD2 (ENSCATG00000044429) #14	PSMB7 (ENSCATG00000033885) #16	NEK6 (ENSCATG00000044368) #15	ENSCATG00000044723	LHX2 (ENSCATG00000018508) #17	DENND1A (ENSCATG00000034371) #18	CRB2 (ENSCATG00000033470) #19	ENSCATG00000043981	STRBP (ENSCATG00000038868) #20	ENSCATG00000037945	RABGAP1 (ENSCATG00000012197) #21	ZBTB26 (ENSCATG00000020299) #22	ZBTB6 (ENSCATG00000020390) #23	RC3H2 (ENSCATG00000036655) #24	ENSCATG00000021126	PDCL (ENSCATG00000034896) #25	ENSCATG00000020376	OR1L1 (ENSCATG00000033251)
Drill	MODERN SPECIES	1462									ENSMLEG00000037698	LHX2 (ENSMLEG00000021612) #17	DENND1A (ENSMLEG00000043396) #18	CRB2 (ENSMLEG00000030682) #19	STRBP (ENSMLEG00000043524) #20	ENSMLEG00000025366	RABGAP1 (ENSMLEG00000027024) #21	ZBTB26 (ENSMLEG00000000689) #22	ZBTB6 (ENSMLEG00000000288) #23	RC3H2 (ENSMLEG00000033809) #24	ENSMLEG00000015252	PDCL (ENSMLEG00000030097) #25	OR1K1 (ENSMLEG00000024612)	ENSMLEG00000028451
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00910000147766	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000162508	ENSGT00940000163027	ENSGT00390000010743.b #27	ENSGT00910000145076.a	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32
Pig-tailed macaque	MODERN SPECIES	317	ARPC5L (ENSMNEG00000021442) #8	ENSMNEG00000044108 ##9	WDR38 (ENSMNEG00000036703) #10	OLFML2A (ENSMNEG00000013543) #11	NR6A1 (ENSMNEG00000032193) #12	NR5A1 (ENSMNEG00000037300) #13	ADGRD2 (ENSMNEG00000034810) #14	PSMB7 (ENSMNEG00000034519) #16	NEK6 (ENSMNEG00000034029) #15	LHX2 (ENSMNEG00000038576) #17	DENND1A (ENSMNEG00000035856) #18	CRB2 (ENSMNEG00000040807) #19	STRBP (ENSMNEG00000045088) #20	ENSMNEG00000039714	RABGAP1 (ENSMNEG00000039246) #21	ZBTB26 (ENSMNEG00000028386) #22	ZBTB6 (ENSMNEG00000026626) #23	RC3H2 (ENSMNEG00000031599) #24	ENSMNEG00000023235	PDCL (ENSMNEG00000035590) #25	ENSMNEG00000028406	OR1L1 (ENSMNEG00000028995)
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT01100000263577.a.a.b.a.a.a.b.b.a.a	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00910000147766	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000162508	ENSGT00940000163027	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30
Rhesus	MODERN SPECIES	6	RPL35 (ENSMMUG00000005260) ##9	WDR38 (ENSMMUG00000005259) #10	ENSMMUG00000061871	OLFML2A (ENSMMUG00000011183) #11	NR6A1 (ENSMMUG00000011185) #12	NR5A1 (ENSMMUG00000014111) #13	ADGRD2 (ENSMMUG00000014110) #14	PSMB7 (ENSMMUG00000060033) #16	NEK6 (ENSMMUG00000007354) #15	LHX2 (ENSMMUG00000003671) #17	ENSMMUG00000049804	DENND1A (ENSMMUG00000006348) #18	CRB2 (ENSMMUG00000006345) #19	STRBP (ENSMMUG00000022919) #20	RABGAP1 (ENSMMUG00000000670) #21	ZBTB26 (ENSMMUG00000000495) #22	ZBTB6 (ENSMMUG00000000496) #23	RC3H2 (ENSMMUG00000021134) #24	ENSMMUG00000058722	PDCL (ENSMMUG00000006896) #25	OR1K1 (ENSMMUG00000039674)	OR5C1 (ENSMMUG00000056026) #26	ENSMMUG00000063639	ENSMMUG00000038944	OR1B1 (ENSMMUG00000058731)	OR1Q1 (ENSMMUG00000060752)	OR1J4 (ENSMMUG00000013711)	OR1J1 (ENSMMUG00000060428)	PTGS1 (ENSMMUG00000012886) #27	MRRF (ENSMMUG00000012882) #28	RBM18 (ENSMMUG00000011455) #29
Crab-eating macaque	MODERN SPECIES	6	ENSMFAG00000059108	ENSMFAG00000055757	ENSMFAG00000050682	NR5A1 (ENSMFAG00000044244) #13	PSMB7 (ENSMFAG00000002588) #16	NEK6 (ENSMFAG00000043882) #15	ENSMFAG00000053849	LHX2 (ENSMFAG00000028670) #17	ENSMFAG00000057010	DENND1A (ENSMFAG00000031585) #18	ENSMFAG00000058067	CRB2 (ENSMFAG00000042297) #19	STRBP (ENSMFAG00000001745) #20	RABGAP1 (ENSMFAG00000043446) #21	RC3H2 (ENSMFAG00000035621) #24	ZBTB26 (ENSMFAG00000009076) #22	ZBTB6 (ENSMFAG00000009223) #23	PDCL (ENSMFAG00000049180) #25	ENSMFAG00000050310	ENSMFAG00000053458	OR1B1 (ENSMFAG00000049737)	OR1Q1 (ENSMFAG00000058086)	ENSMFAG00000053359	OR1J4 (ENSMFAG00000043044)	OR1J1 (ENSMFAG00000043292)	PTGS1 (ENSMFAG00000046283) #27	MRRF (ENSMFAG00000044303) #28	ENSMFAG00000060863	RBM18 (ENSMFAG00000000443) #29	LHX6 (ENSMFAG00000044342) #30	MORN5 (ENSMFAG00000035428) #31
Vervet Monkey	MODERN SPECIES	3	SCAI (ENSCSAG00000013617)	GOLGA1 (ENSCSAG00000013605) #7	ARPC5L (ENSCSAG00000013596) #8	WDR38 (ENSCSAG00000013588) #10	OLFML2A (ENSCSAG00000013568) #11	NR6A1 (ENSCSAG00000013563) #12	NR5A1 (ENSCSAG00000013558) #13	ADGRD2 (ENSCSAG00000013549) #14	PSMB7 (ENSCSAG00000013536) #16	NEK6 (ENSCSAG00000013531) #15	LHX2 (ENSCSAG00000013520) #17	DENND1A (ENSCSAG00000013513) #18	CRB2 (ENSCSAG00000013494) #19	STRBP (ENSCSAG00000013456) #20	RABGAP1 (ENSCSAG00000013436) #21	ZBTB26 (ENSCSAG00000019712) #22	ZBTB6 (ENSCSAG00000019713) #23	RC3H2 (ENSCSAG00000013416) #24	PDCL (ENSCSAG00000013404) #25	OR5C1 (ENSCSAG00000000480) #26	ENSCSAG00000000479	ENSCSAG00000013401	OR1B1 (ENSCSAG00000000478)	PTGS1 (ENSCSAG00000013388) #27	MRRF (ENSCSAG00000013379) #28	RBM18 (ENSCSAG00000013373) #29	LHX6 (ENSCSAG00000013360) #30	MORN5 (ENSCSAG00000013336) #31	NDUFA8 (ENSCSAG00000013331) #32	TTLL11 (ENSCSAG00000013327) #33	DAB2IP (ENSCSAG00000013322) #34
Rhinopithecus	ANCESTRAL SPECIES	140	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000153288.a.b.a.b.l.a	ENSGT00940000158540 #17	ENSGT00940000156261.g #18	ENSGT00950000183101.a.b.b #19	ENSGT00910000147294	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b
Golden snub-nosed monkey	MODERN SPECIES	2356											ENSRROG00000007367 #18	CRB2 (ENSRROG00000044022) #19	STRBP (ENSRROG00000033417) #20	ENSRROG00000039474	RABGAP1 (ENSRROG00000034114) #21	ZBTB26 (ENSRROG00000016225) #22	ZBTB6 (ENSRROG00000028671) #23	RC3H2 (ENSRROG00000043784) #24	PDCL (ENSRROG00000039540) #25	OR1K1 (ENSRROG00000036444)
Black snub-nosed monkey	MODERN SPECIES	491	WDR38 (ENSRBIG00000042146) #10	OLFML2A (ENSRBIG00000029375) #11	NR6A1 (ENSRBIG00000034563) #12	NR5A1 (ENSRBIG00000034857) #13	ADGRD2 (ENSRBIG00000002924) #14	PSMB7 (ENSRBIG00000024252) #16	NEK6 (ENSRBIG00000032831) #15	ENSRBIG00000042581	LHX2 (ENSRBIG00000035554) #17	DENND1A (ENSRBIG00000022086) #18	CRB2 (ENSRBIG00000040048) #19	ENSRBIG00000040405	STRBP (ENSRBIG00000044535) #20	ENSRBIG00000006154	RABGAP1 (ENSRBIG00000034532) #21	ZBTB26 (ENSRBIG00000037685) #22	ZBTB6 (ENSRBIG00000002621) #23	RC3H2 (ENSRBIG00000032579) #24	PDCL (ENSRBIG00000041209) #25	OR1K1 (ENSRBIG00000038148)
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000167867	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463.j	ENSGT00940000165463.i	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00910000148777	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463.j	ENSGT00940000165463.i	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00910000148777	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463.j	ENSGT00940000165463.i	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Pan	ANCESTRAL SPECIES	18	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00900000141073.s	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00910000148777	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00860000136276	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463.j	ENSGT00940000165463.i	ENSGT00940000165895	ENSGT00940000163223	ENSGT00940000164453	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Chimpanzee	MODERN SPECIES	22	WDR38 (ENSPTRG00000021360) #10	OLFML2A (ENSPTRG00000021359) #11	ENSPTRG00000050508	NR6A1 (ENSPTRG00000051156) #12	NR5A1 (ENSPTRG00000021357) #13	ADGRD2 (ENSPTRG00000021356) #14	PSMB7 (ENSPTRG00000021354) #16	NEK6 (ENSPTRG00000021352) #15	LHX2 (ENSPTRG00000021351) #17	ENSPTRG00000044471	DENND1A (ENSPTRG00000021349) #18	CRB2 (ENSPTRG00000021348) #19	STRBP (ENSPTRG00000021346) #20	ENSPTRG00000044284	RABGAP1 (ENSPTRG00000021342) #21	ZBTB26 (ENSPTRG00000021341) #22	ZBTB6 (ENSPTRG00000043021) #23	RC3H2 (ENSPTRG00000021339) #24	PDCL (ENSPTRG00000021338) #25	OR1K1 (ENSPTRG00000029108)	OR5C1 (ENSPTRG00000021337) #26	OR1L6 (ENSPTRG00000021336)	OR1L4 (ENSPTRG00000021335)	ENSPTRG00000042835	OR1L3 (ENSPTRG00000021334)	OR1L1 (ENSPTRG00000021333)	OR1Q1 (ENSPTRG00000021332)	OR1L8 (ENSPTRG00000021330)	OR1N2 (ENSPTRG00000021329)	OR1N1 (ENSPTRG00000021328)	OR1J4 (ENSPTRG00000048508)
Bonobo	MODERN SPECIES	22	WDR38 (ENSPPAG00000009033) #10	OLFML2A (ENSPPAG00000036204) #11	ENSPPAG00000042042	NR6A1 (ENSPPAG00000027363) #12	NR5A1 (ENSPPAG00000033832) #13	ADGRD2 (ENSPPAG00000029184) #14	PSMB7 (ENSPPAG00000043451) #16	NEK6 (ENSPPAG00000042047) #15	LHX2 (ENSPPAG00000034417) #17	ENSPPAG00000028123	DENND1A (ENSPPAG00000038800) #18	CRB2 (ENSPPAG00000030633) #19	STRBP (ENSPPAG00000000242) #20	ENSPPAG00000034339	RABGAP1 (ENSPPAG00000013688) #21	ZBTB26 (ENSPPAG00000005083) #22	ZBTB6 (ENSPPAG00000026095) #23	RC3H2 (ENSPPAG00000036013) #24	PDCL (ENSPPAG00000026211) #25	OR1K1 (ENSPPAG00000005279)	OR5C1 (ENSPPAG00000006222) #26	OR1L6 (ENSPPAG00000005838)	OR1L4 (ENSPPAG00000005013)	ENSPPAG00000027783	OR1L3 (ENSPPAG00000000874)	OR1Q1 (ENSPPAG00000003934)	OR1L8 (ENSPPAG00000000690)	OR1N2 (ENSPPAG00000005365)	OR1N1 (ENSPPAG00000033336)	OR1J4 (ENSPPAG00000017939)	OR1J2 (ENSPPAG00000025487)
Human	MODERN SPECIES	21	ARPC5L (ENSG00000136950) #8	RPL35 (ENSG00000136942) #9	WDR38 (ENSG00000136918) #10	OLFML2A (ENSG00000185585) #11	NR6A1 (ENSG00000148200) #12	NR5A1 (ENSG00000136931) #13	ADGRD2 (ENSG00000180264) #14	PSMB7 (ENSG00000136930) #16	NEK6 (ENSG00000119408) #15	LHX2 (ENSG00000106689) #17	DENND1A (ENSG00000119522) #18	CRB2 (ENSG00000148204) #19	STRBP (ENSG00000165209) #20	GPR21 (ENSG00000188394)	RABGAP1 (ENSG00000011454) #21	ZBTB26 (ENSG00000171448) #22	ZBTB6 (ENSG00000186130) #23	RC3H2 (ENSG00000056586) #24	OR1K1 (ENSG00000165204)	PDCL (ENSG00000136940) #25	OR5C1 (ENSG00000148215) #26	OR1L6 (ENSG00000171459)	OR1L4 (ENSG00000136939)	OR1L3 (ENSG00000171481)	OR1L1 (ENSG00000173679)	OR1B1 (ENSG00000280094)	OR1Q1 (ENSG00000165202)	OR1L8 (ENSG00000171496)	OR1N2 (ENSG00000171501)	OR1N1 (ENSG00000171505)	OR1J4 (ENSG00000239590)
Gorilla	MODERN SPECIES	22	WDR38 (ENSGGOG00000004105) #10	OLFML2A (ENSGGOG00000004100) #11	NR6A1 (ENSGGOG00000009250) #12	NR5A1 (ENSGGOG00000008994) #13	ADGRD2 (ENSGGOG00000008978) #14	PSMB7 (ENSGGOG00000012164) #16	NEK6 (ENSGGOG00000012155) #15	LHX2 (ENSGGOG00000008475) #17	ENSGGOG00000036998	DENND1A (ENSGGOG00000016611) #18	CRB2 (ENSGGOG00000016601) #19	ENSGGOG00000039044	STRBP (ENSGGOG00000003901) #20	ENSGGOG00000042134	RABGAP1 (ENSGGOG00000003890) #21	ZBTB26 (ENSGGOG00000015134) #22	ZBTB6 (ENSGGOG00000036621) #23	RC3H2 (ENSGGOG00000017062) #24	PDCL (ENSGGOG00000013392) #25	OR5C1 (ENSGGOG00000016948) #26	OR1L4 (ENSGGOG00000005056)	OR1L3 (ENSGGOG00000013779)	OR1L1 (ENSGGOG00000004567)	OR1Q1 (ENSGGOG00000005228)	OR1N2 (ENSGGOG00000017004)	OR1N1 (ENSGGOG00000022170)	OR1J2 (ENSGGOG00000039689)	OR1J1 (ENSGGOG00000025401)	PTGS1 (ENSGGOG00000009372) #27	ENSGGOG00000023499	MRRF (ENSGGOG00000036258) #28
Orangutan	MODERN SPECIES	22	ARPC5L (ENSPPYG00000019604) #8	RPL35 (ENSPPYG00000019603) #9	WDR38 (ENSPPYG00000019602) #10	OLFML2A (ENSPPYG00000019601) #11	NR6A1 (ENSPPYG00000019600) #12	NR5A1 (ENSPPYG00000019599) #13	ADGRD2 (ENSPPYG00000019598) #14	PSMB7 (ENSPPYG00000019596) #16	NEK6 (ENSPPYG00000019594) #15	LHX2 (ENSPPYG00000019593) #17	DENND1A (ENSPPYG00000019592) #18	CRB2 (ENSPPYG00000019880) #19	STRBP (ENSPPYG00000019589) #20	ENSPPYG00000031287	RABGAP1 (ENSPPYG00000019586) #21	ZBTB26 (ENSPPYG00000037988) #22	ZBTB6 (ENSPPYG00000030463) #23	RC3H2 (ENSPPYG00000019583) #24	PDCL (ENSPPYG00000019582) #25	OR5C1 (ENSPPYG00000037493) #26	OR1L6 (ENSPPYG00000019580)	OR1L4 (ENSPPYG00000019579)	OR1B1 (ENSPPYG00000020064)	OR1Q1 (ENSPPYG00000020060)	OR1N2 (ENSPPYG00000019576)	OR1N1 (ENSPPYG00000019575)	OR1J4 (ENSPPYG00000033379)	OR1J2 (ENSPPYG00000032217)	OR1J1 (ENSPPYG00000039553)	PTGS1 (ENSPPYG00000019571) #27	ENSPPYG00000019570 #28
Gibbon	MODERN SPECIES	23	OLFML2A (ENSNLEG00000017289) #11	ENSNLEG00000033577	ENSNLEG00000035190	NR6A1 (ENSNLEG00000017287) #12	NR5A1 (ENSNLEG00000017282) #13	ENSNLEG00000033335 #14	PSMB7 (ENSNLEG00000036020) #16	NEK6 (ENSNLEG00000017263) #15	LHX2 (ENSNLEG00000028123) #17	ENSNLEG00000034780	DENND1A (ENSNLEG00000017247) #18	ENSNLEG00000017244 #19	STRBP (ENSNLEG00000017223) #20	ENSNLEG00000030097	RABGAP1 (ENSNLEG00000017216) #21	ZBTB26 (ENSNLEG00000017215) #22	ZBTB6 (ENSNLEG00000035883) #23	RC3H2 (ENSNLEG00000017204) #24	PDCL (ENSNLEG00000029580) #25	OR1L3 (ENSNLEG00000018995)	OR1L1 (ENSNLEG00000018994)	ENSNLEG00000032722	OR1L8 (ENSNLEG00000018992)	ENSNLEG00000033985	OR1J1 (ENSNLEG00000018990)	PTGS1 (ENSNLEG00000017180) #27	ENSNLEG00000017177	MRRF (ENSNLEG00000030419) #28	ENSNLEG00000034604	RBM18 (ENSNLEG00000017174) #29	LHX6 (ENSNLEG00000017167) #30
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084.i #28
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.a ##9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000163649	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084.i #28
Cebidae_a	ANCESTRAL SPECIES	68	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00390000001319.z	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25
Capuchin	MODERN SPECIES	206	ENSCCAG00000003039 #8	ENSCCAG00000026875 ##9	WDR38 (ENSCCAG00000024912) #10	OLFML2A (ENSCCAG00000023075) #11	NR6A1 (ENSCCAG00000024096) #12	NR5A1 (ENSCCAG00000024659) #13	ADGRD2 (ENSCCAG00000033790) #14	PSMB7 (ENSCCAG00000025367) #16	NEK6 (ENSCCAG00000019309) #15	LHX2 (ENSCCAG00000022112) #17	DENND1A (ENSCCAG00000020125) #18	CRB2 (ENSCCAG00000033115) #19	STRBP (ENSCCAG00000027357) #20	RABGAP1 (ENSCCAG00000024911) #21	ENSCCAG00000033724	ZBTB26 (ENSCCAG00000003111) #22	ZBTB6 (ENSCCAG00000020024) #23	RC3H2 (ENSCCAG00000001404) #24	PDCL (ENSCCAG00000019775) #25	ENSCCAG00000013468
Bolivian squirrel monkey	MODERN SPECIES	172	ARPC5L (ENSSBOG00000026457) #8	RPL35 (ENSSBOG00000030899) #9	WDR38 (ENSSBOG00000030562) #10	OLFML2A (ENSSBOG00000032661) #11	NR6A1 (ENSSBOG00000031223) #12	NR5A1 (ENSSBOG00000026963) #13	ADGRD2 (ENSSBOG00000025524) #14	PSMB7 (ENSSBOG00000028132) #16	NEK6 (ENSSBOG00000028368) #15	LHX2 (ENSSBOG00000012275) #17	DENND1A (ENSSBOG00000033627) #18	CRB2 (ENSSBOG00000026890) #19	STRBP (ENSSBOG00000003663) #20	RABGAP1 (ENSSBOG00000019849) #21	ENSSBOG00000028995	ZBTB26 (ENSSBOG00000018243) #22	ZBTB6 (ENSSBOG00000017105) #23	RC3H2 (ENSSBOG00000029100) #24	PDCL (ENSSBOG00000020323) #25	OR1L1 (ENSSBOG00000036082)
Marmoset	MODERN SPECIES		WDR38 (ENSCJAG00000006695) #10	ENSCJAG00000077082	OLFML2A (ENSCJAG00000006668) #11	ENSCJAG00000078726	NR6A1 (ENSCJAG00000006631) #12	NR5A1 (ENSCJAG00000006624) #13	ADGRD2 (ENSCJAG00000040439) #14	PSMB7 (ENSCJAG00000006541) #16	NEK6 (ENSCJAG00000006507) #15	LHX2 (ENSCJAG00000006496) #17	ENSCJAG00000085719	DENND1A (ENSCJAG00000006461) #18	CRB2 (ENSCJAG00000006432) #19	STRBP (ENSCJAG00000019997) #20	RABGAP1 (ENSCJAG00000020027) #21	ZBTB26 (ENSCJAG00000021770) #22	ZBTB6 (ENSCJAG00000020049) #23	RC3H2 (ENSCJAG00000020050) #24	PDCL (ENSCJAG00000087386) #25	OR5C1 (ENSCJAG00000022331) #26	ENSCJAG00000086095	ENSCJAG00000079179	OR1L3 (ENSCJAG00000020065)	OR1Q1 (ENSCJAG00000040823)	OR1L8 (ENSCJAG00000085216)	OR1N2 (ENSCJAG00000020076)	ENSCJAG00000066368	OR1N1 (ENSCJAG00000021773)	OR1J4 (ENSCJAG00000075711)	OR1J2 (ENSCJAG00000080787)	PTGS1 (ENSCJAG00000020078) #27
Mas night monkey	MODERN SPECIES	768	WDR38 (ENSANAG00000033407) #10	OLFML2A (ENSANAG00000028567) #11	NR6A1 (ENSANAG00000036986) #12	NR5A1 (ENSANAG00000027136) #13	ADGRD2 (ENSANAG00000036641) #14	PSMB7 (ENSANAG00000030640) #16	NEK6 (ENSANAG00000029360) #15	LHX2 (ENSANAG00000018858) #17	DENND1A (ENSANAG00000034989) #18	CRB2 (ENSANAG00000030431) #19	ENSANAG00000004458	STRBP (ENSANAG00000021993) #20	ENSANAG00000021222	ENSANAG00000001745	RABGAP1 (ENSANAG00000022667) #21	ZBTB26 (ENSANAG00000036419) #22	ZBTB6 (ENSANAG00000020106) #23	RC3H2 (ENSANAG00000030862) #24	PDCL (ENSANAG00000036396) #25	PTGS1 (ENSANAG00000029954) #27	ENSANAG00000026416	ENSANAG00000027637 #28	RBM18 (ENSANAG00000035441) #29	LHX6 (ENSANAG00000036902) #30	MORN5 (ENSANAG00000028589) #31	NDUFA8 (ENSANAG00000030008) #32	TTLL11 (ENSANAG00000022904) #33	DAB2IP (ENSANAG00000022082) #34	ENSANAG00000022384	STOM (ENSANAG00000037888) #36	GSN (ENSANAG00000024960) #37
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5931													FAM199X (ENSTSYG00000014264)	ENSTSYG00000030635	ENSTSYG00000005948	ENSTSYG00000012542 #22
Tarsier	MODERN SPECIES	5225																ZBTB26 (ENSTSYG00000033343) #22	ZBTB6 (ENSTSYG00000000978) #23	RC3H2 (ENSTSYG00000000961) #24	PDCL (ENSTSYG00000027357) #25
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000162852.b.a	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B.b.a	ENSGT00950000182858.B.b.b
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000163223	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32
Mouse lemur	MODERN SPECIES	1	GOLGA1 (ENSMICG00000002928) #7	ARPC5L (ENSMICG00000002925) #8	RPL35 (ENSMICG00000002922) #9	WDR38 (ENSMICG00000038127) #10	OLFML2A (ENSMICG00000002915) #11	NR6A1 (ENSMICG00000002911) #12	NR5A1 (ENSMICG00000002907) #13	ADGRD2 (ENSMICG00000046284) #14	PSMB7 (ENSMICG00000043101) #16	NEK6 (ENSMICG00000009990) #15	LHX2 (ENSMICG00000009968) #17	DENND1A (ENSMICG00000000554) #18	CRB2 (ENSMICG00000000551) #19	STRBP (ENSMICG00000000832) #20	RABGAP1 (ENSMICG00000000821) #21	ZBTB26 (ENSMICG00000037770) #22	ZBTB6 (ENSMICG00000047456) #23	RC3H2 (ENSMICG00000003227) #24	PDCL (ENSMICG00000003224) #25	ENSMICG00000035760	ENSMICG00000044928	ENSMICG00000043641	ENSMICG00000043496	ENSMICG00000045321	ENSMICG00000033883	PTGS1 (ENSMICG00000009196) #27	ENSMICG00000031629	MRRF (ENSMICG00000016168) #28	RBM18 (ENSMICG00000046793) #29	LHX6 (ENSMICG00000016150) #30	MORN5 (ENSMICG00000016144) #31
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.i.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000163223	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33
Greater bamboo lemur	MODERN SPECIES	519	ENSPSMG00000022444 #8	RPL35 (ENSPSMG00000022453) #9	WDR38 (ENSPSMG00000022469) #10	OLFML2A (ENSPSMG00000022484) #11	NR6A1 (ENSPSMG00000022523) #12	NR5A1 (ENSPSMG00000022550) #13	ADGRD2 (ENSPSMG00000022563) #14	PSMB7 (ENSPSMG00000022579) #16	NEK6 (ENSPSMG00000022654) #15	ENSPSMG00000022686	LHX2 (ENSPSMG00000022690) #17	DENND1A (ENSPSMG00000022823) #18	CRB2 (ENSPSMG00000022863) #19	STRBP (ENSPSMG00000022889) #20	RABGAP1 (ENSPSMG00000022917) #21	ZBTB26 (ENSPSMG00000022920) #22	ZBTB6 (ENSPSMG00000022921) #23	RC3H2 (ENSPSMG00000022961) #24	PDCL (ENSPSMG00000022983) #25	OR1K1 (ENSPSMG00000022985)	OR5C1 (ENSPSMG00000022988) #26	ENSPSMG00000022993	ENSPSMG00000022994	ENSPSMG00000022999	ENSPSMG00000023002	ENSPSMG00000023005	OR1Q1 (ENSPSMG00000000044)	ENSPSMG00000000082	ENSPSMG00000000088	ENSPSMG00000000097	OR1N1 (ENSPSMG00000000112)
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	995											LHX2 (ENSPCOG00000004468) #17	DENND1A (ENSPCOG00000025342) #18	CRB2 (ENSPCOG00000025106) #19	STRBP (ENSPCOG00000027563) #20	RABGAP1 (ENSPCOG00000000532) #21	ENSPCOG00000014220 #22	ZBTB6 (ENSPCOG00000003019) #23	RC3H2 (ENSPCOG00000028817) #24	PDCL (ENSPCOG00000026496) #25	OR1L3 (ENSPCOG00000010946)	ENSPCOG00000019615	PTGS1 (ENSPCOG00000008151) #27	ENSPCOG00000026480 #28	RBM18 (ENSPCOG00000024474) #29	LHX6 (ENSPCOG00000019624) #30	MORN5 (ENSPCOG00000023443) #31	NDUFA8 (ENSPCOG00000025464) #32	TTLL11 (ENSPCOG00000012570) #33	DAB2IP (ENSPCOG00000021793) #34	ENSPCOG00000023306	STOM (ENSPCOG00000009840) #36
Coquerels sifaka	MODERN SPECIES	923															ENSPCOG00000023486	ENSPCOG00000018602 #22
Bushbaby	MODERN SPECIES	129	ARPC5L (ENSOGAG00000030099) #8	ENSOGAG00000008513 ##9	WDR38 (ENSOGAG00000008507) #10	OLFML2A (ENSOGAG00000008504) #11	NR6A1 (ENSOGAG00000030677) #12	NR5A1 (ENSOGAG00000017023) #13	ADGRD2 (ENSOGAG00000003517) #14	PSMB7 (ENSOGAG00000003513) #16	NEK6 (ENSOGAG00000003510) #15	LHX2 (ENSOGAG00000003505) #17	ENSOGAG00000024358	DENND1A (ENSOGAG00000013851) #18	CRB2 (ENSOGAG00000031205) #19	STRBP (ENSOGAG00000014739) #20	RABGAP1 (ENSOGAG00000014722) #21	ZBTB26 (ENSOGAG00000010685) #22	ZBTB6 (ENSOGAG00000010682) #23	RC3H2 (ENSOGAG00000010678) #24	PDCL (ENSOGAG00000011889) #25	ENSOGAG00000032872	OR5C1 (ENSOGAG00000006530) #26	ENSOGAG00000030362	ENSOGAG00000015770	ENSOGAG00000030138	ENSOGAG00000006455	ENSOGAG00000033185	OR1B1 (ENSOGAG00000006452)	ENSOGAG00000029409	OR1Q1 (ENSOGAG00000006448)	ENSOGAG00000024713	ENSOGAG00000002902
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000165018	ENSGT00940000163103
Glires	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00730000111617
Lagomorpha	ANCESTRAL SPECIES	16	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165929	ENSGT00730000111617	ENSGT00940000162508	ENSGT00940000163027	ENSGT00940000154381
Rabbit	MODERN SPECIES	432	ENSOCUG00000002996 #9	WDR38 (ENSOCUG00000002992) #10	OLFML2A (ENSOCUG00000002473) #11	ENSOCUG00000036292	NR6A1 (ENSOCUG00000007599) #12	NR5A1 (ENSOCUG00000007848) #13	ADGRD2 (ENSOCUG00000006271) #14	PSMB7 (ENSOCUG00000009114) #16	ENSOCUG00000009108 #15	LHX2 (ENSOCUG00000007757) #17	DENND1A (ENSOCUG00000005351) #18	ENSOCUG00000037812	ENSOCUG00000031599	STRBP (ENSOCUG00000009397) #20	RABGAP1 (ENSOCUG00000009382) #21	ZBTB26 (ENSOCUG00000008815) #22	RC3H2 (ENSOCUG00000008804) #24	PDCL (ENSOCUG00000008799) #25	OR5C1 (ENSOCUG00000017249) #26	ENSOCUG00000010448	ENSOCUG00000001934	ENSOCUG00000001935	ENSOCUG00000024924	ENSOCUG00000026946	ENSOCUG00000023709	OR1L3 (ENSOCUG00000002331)	OR1B1 (ENSOCUG00000024226)	OR1Q1 (ENSOCUG00000013845)	ENSOCUG00000015890	ENSOCUG00000025208	OR1J4 (ENSOCUG00000030487)
Pika	MODERN SPECIES	10576																ZBTB26 (ENSOPRG00000013334) #22
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000165018	ENSGT00940000163103	ENSGT00940000163451
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451.b	ENSGT00940000154381.f.a
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00930000151076.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451.b	ENSGT00940000154381.f.a	ENSGT00940000163451.a	ENSGT00940000162508	ENSGT00940000163027
Mus	ANCESTRAL SPECIES	1	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076.b.b	ENSGT00930000151076.b.a	ENSGT00930000151076.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451.b
Mus_A	ANCESTRAL SPECIES		ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000161916.j	ENSGT00940000161916.i	ENSGT00900000141254	ENSGT00930000151076.b.b	ENSGT00930000151076.b.a	ENSGT00930000151076.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000161916.j	ENSGT00940000161916.i	ENSGT00900000141254	ENSGT00930000151076.b.b	ENSGT00930000151076.b.a	ENSGT00930000151076.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103
Mouse	MODERN SPECIES	11	Golga1 (ENSMUSG00000026754) #7	Arpc5l (ENSMUSG00000026755) #8	Rpl35 (ENSMUSG00000062997) #9	Wdr38 (ENSMUSG00000035295) #10	Olfml2a (ENSMUSG00000046618) #11	Nr6a1 (ENSMUSG00000063972) #12	Nr5a1 (ENSMUSG00000026751) #13	Psmb7 (ENSMUSG00000026750) #16	Nek6 (ENSMUSG00000026749) #15	Lhx2 (ENSMUSG00000000247) #17	Dennd1a (ENSMUSG00000035392) #18	Crb2 (ENSMUSG00000035403) #19	Gpr21 (ENSMUSG00000053164)	Strbp (ENSMUSG00000026915) #20	Rabgap1 (ENSMUSG00000035437) #21	Zbtb26 (ENSMUSG00000050714) #22	Zbtb6 (ENSMUSG00000066798) #23	Rc3h2 (ENSMUSG00000075376) #24	Pdcl (ENSMUSG00000009030) #25	Or5c1 (ENSMUSG00000049018) #26	Or1af1 (ENSMUSG00000068947)	Or1l4 (ENSMUSG00000059429)	Or1l4b (ENSMUSG00000078198)	Or1b1 (ENSMUSG00000075377)	Or12k8 (ENSMUSG00000075378)	Or12k7 (ENSMUSG00000083361)	Or12k5 (ENSMUSG00000075379)	Or1q1 (ENSMUSG00000055838)	Or1ak2 (ENSMUSG00000070943)	Or1l8 (ENSMUSG00000075380)	Or1n2 (ENSMUSG00000055088)
Mus_C	ANCESTRAL SPECIES		ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000161916.j	ENSGT00940000161916.i	ENSGT00900000141254	ENSGT00930000151076.b.b	ENSGT00930000151076.b.a	ENSGT00930000151076.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103
Steppe mouse	MODERN SPECIES	3157	Scai (ENSMSIG00000026395)	Golga1 (ENSMSIG00000026434) #7	Arpc5l (ENSMSIG00000026537) #8	ENSMSIG00000026549 #9	Wdr38 (ENSMSIG00000026555) #10	Olfml2a (ENSMSIG00000026578) #11	Nr6a1 (ENSMSIG00000000135) #12	Nr5a1 (ENSMSIG00000000273) #13	Psmb7 (ENSMSIG00000000365) #16	Nek6 (ENSMSIG00000000470) #15	Lhx2 (ENSMSIG00000000576) #17	Dennd1a (ENSMSIG00000000638) #18	Crb2 (ENSMSIG00000000810) #19	Strbp (ENSMSIG00000000857) #20	Rabgap1 (ENSMSIG00000000948) #21	Zbtb26 (ENSMSIG00000001038) #22	Zbtb6 (ENSMSIG00000001048) #23	Rc3h2 (ENSMSIG00000001099) #24	Pdcl (ENSMSIG00000001175) #25	Or5c1 (ENSMSIG00000001203) #26	Or1af1 (ENSMSIG00000001213)	ENSMSIG00000001220	Or1l4 (ENSMSIG00000001248)	Or1l4b (ENSMSIG00000001264)	Or1b1 (ENSMSIG00000001286)	Or12k7 (ENSMSIG00000001300)	Or12k5 (ENSMSIG00000001316)	Or1q1 (ENSMSIG00000001324)	Or1ak2 (ENSMSIG00000001333)	Or1l8 (ENSMSIG00000001344)	Or1n2 (ENSMSIG00000001355)
spretus	MODERN SPECIES	11	Golga1 (MGP_SPRETEiJ_G0024453) #7	Arpc5l (MGP_SPRETEiJ_G0024452) #8	MGP_SPRETEiJ_G0024451 #9	Wdr38 (MGP_SPRETEiJ_G0024450) #10	Olfml2a (MGP_SPRETEiJ_G0024449) #11	Nr6a1 (MGP_SPRETEiJ_G0024448) #12	Nr5a1 (MGP_SPRETEiJ_G0024447) #13	Psmb7 (MGP_SPRETEiJ_G0024446) #16	Nek6 (MGP_SPRETEiJ_G0024445) #15	Lhx2 (MGP_SPRETEiJ_G0024444) #17	Dennd1a (MGP_SPRETEiJ_G0024443) #18	Crb2 (MGP_SPRETEiJ_G0024442) #19	Gpr21 (MGP_SPRETEiJ_G0024441)	MGP_SPRETEiJ_G0024440 #20	Rabgap1 (MGP_SPRETEiJ_G0024439) #21	Zbtb26 (MGP_SPRETEiJ_G0024438) #22	Zbtb6 (MGP_SPRETEiJ_G0024437) #23	Rc3h2 (MGP_SPRETEiJ_G0024436) #24	Pdcl (MGP_SPRETEiJ_G0024435) #25	Or5c1 (MGP_SPRETEiJ_G0024434) #26	Or1af1 (MGP_SPRETEiJ_G0024433)	Or1l4b (MGP_SPRETEiJ_G0024432)	Or1l4 (MGP_SPRETEiJ_G0024431)	Or1b1 (MGP_SPRETEiJ_G0024430)	Or12k8 (MGP_SPRETEiJ_G0024429)	Or12k7 (MGP_SPRETEiJ_G0024428)	Or12k5 (MGP_SPRETEiJ_G0024427)	Or1q1 (MGP_SPRETEiJ_G0024426)	Or1ak2 (MGP_SPRETEiJ_G0024425)	Or1l8 (MGP_SPRETEiJ_G0024424)	Or1n2 (MGP_SPRETEiJ_G0024423)
Ryukyu mouse	MODERN SPECIES	11	Golga1 (MGP_CAROLIEiJ_G0023533) #7	Arpc5l (MGP_CAROLIEiJ_G0023532) #8	MGP_CAROLIEiJ_G0023531 #9	Wdr38 (MGP_CAROLIEiJ_G0023530) #10	Olfml2a (MGP_CAROLIEiJ_G0023529) #11	Nr6a1 (MGP_CAROLIEiJ_G0023528) #12	Nr5a1 (MGP_CAROLIEiJ_G0023527) #13	Psmb7 (MGP_CAROLIEiJ_G0023526) #16	Nek6 (MGP_CAROLIEiJ_G0023525) #15	Lhx2 (MGP_CAROLIEiJ_G0023524) #17	Dennd1a (MGP_CAROLIEiJ_G0023523) #18	Crb2 (MGP_CAROLIEiJ_G0023522) #19	Gpr21 (MGP_CAROLIEiJ_G0023521)	Strbp (MGP_CAROLIEiJ_G0023520) #20	Rabgap1 (MGP_CAROLIEiJ_G0023519) #21	Zbtb26 (MGP_CAROLIEiJ_G0023518) #22	Zbtb6 (MGP_CAROLIEiJ_G0023517) #23	Rc3h2 (MGP_CAROLIEiJ_G0023516) #24	Pdcl (MGP_CAROLIEiJ_G0023515) #25	Or5c1 (MGP_CAROLIEiJ_G0023514) #26	Or1af1 (MGP_CAROLIEiJ_G0023513)	Or1l4 (MGP_CAROLIEiJ_G0023512)	Or1l4b (MGP_CAROLIEiJ_G0023511)	Or1b1 (MGP_CAROLIEiJ_G0023510)	Or12k8 (MGP_CAROLIEiJ_G0023509)	Or12k7 (MGP_CAROLIEiJ_G0023508)	Or12k5 (MGP_CAROLIEiJ_G0023507)	Or1q1 (MGP_CAROLIEiJ_G0023506)	Or1ak2 (MGP_CAROLIEiJ_G0023505)	MGP_CAROLIEiJ_G0023504	Or1n2 (MGP_CAROLIEiJ_G0023503)
Shrew mouse	MODERN SPECIES	16	Scai (MGP_PahariEiJ_G0024986)	Golga1 (MGP_PahariEiJ_G0024985) #7	Arpc5l (MGP_PahariEiJ_G0024984) #8	MGP_PahariEiJ_G0024983 #9	Olfml2a (MGP_PahariEiJ_G0024982) #11	Nr6a1 (MGP_PahariEiJ_G0024981) #12	Nr5a1 (MGP_PahariEiJ_G0024980) #13	Psmb7 (MGP_PahariEiJ_G0024979) #16	Nek6 (MGP_PahariEiJ_G0024978) #15	Lhx2 (MGP_PahariEiJ_G0024977) #17	Dennd1a (MGP_PahariEiJ_G0024976) #18	Crb2 (MGP_PahariEiJ_G0024975) #19	Gpr21 (MGP_PahariEiJ_G0024974)	Strbp (MGP_PahariEiJ_G0024973) #20	Rabgap1 (MGP_PahariEiJ_G0024972) #21	Zbtb26 (MGP_PahariEiJ_G0024971) #22	Zbtb6 (MGP_PahariEiJ_G0024970) #23	Rc3h2 (MGP_PahariEiJ_G0024969) #24	Pdcl (MGP_PahariEiJ_G0024968) #25	Or5c1 (MGP_PahariEiJ_G0024967) #26	Or1af1 (MGP_PahariEiJ_G0024966)	MGP_PahariEiJ_G0024965	Or12k8 (MGP_PahariEiJ_G0024964)	Or12k7 (MGP_PahariEiJ_G0024963)	Or12k5 (MGP_PahariEiJ_G0024962)	Or1q1 (MGP_PahariEiJ_G0024961)	Or1ak2 (MGP_PahariEiJ_G0024960)	MGP_PahariEiJ_G0024959	Or1n2 (MGP_PahariEiJ_G0024958)	Or1n1b (MGP_PahariEiJ_G0024957)	MGP_PahariEiJ_G0024956
Rat	MODERN SPECIES	13	Wdr38 (ENSRNOG00000014102) #10	Olfml2a (ENSRNOG00000014034) #11	Nr6a1 (ENSRNOG00000013232) #12	Nr5a1 (ENSRNOG00000012682) #13	Rps20 (ENSRNOG00000029627)	ENSRNOG00000066446	Psmb7 (ENSRNOG00000011732) #16	Nek6 (ENSRNOG00000010897) #15	Lhx2 (ENSRNOG00000010551) #17	Dennd1a (ENSRNOG00000010526) #18	Crb2 (ENSRNOG00000025498) #19	RGD1561137 (ENSRNOG00000030143)	Strbp (ENSRNOG00000010150) #20	Gpr21 (ENSRNOG00000042269)	Rabgap1 (ENSRNOG00000009402) #21	Zbtb26 (ENSRNOG00000009346) #22	Zbtb6 (ENSRNOG00000009340) #23	Rc3h2 (ENSRNOG00000009196) #24	Pdcl (ENSRNOG00000008484) #25	ENSRNOG00000067722	LOC100911251 (ENSRNOG00000062482)	ENSRNOG00000069411	ENSRNOG00000066103	Elob-ps13 (ENSRNOG00000046568)	ENSRNOG00000068416	ENSRNOG00000065620	ENSRNOG00000064158	ENSRNOG00000068577	ENSRNOG00000069831	AABR07051787.1 (ENSRNOG00000059243) #25	Or5c1 (ENSRNOG00000008003) #26
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451.b	ENSGT00940000154381.f.a
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.a #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451.b	ENSGT00940000163451.a
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	17	Scai (ENSPEMG00000017936)	Golga1 (ENSPEMG00000014526) #7	Arpc5l (ENSPEMG00000022681) #8	ENSPEMG00000021500 #9	Wdr38 (ENSPEMG00000010623) #10	Olfml2a (ENSPEMG00000029944) #11	Nr6a1 (ENSPEMG00000021698) #12	Nr5a1 (ENSPEMG00000018185) #13	Psmb7 (ENSPEMG00000011436) #16	Nek6 (ENSPEMG00000023305) #15	Lhx2 (ENSPEMG00000023994) #17	Dennd1a (ENSPEMG00000001409) #18	Crb2 (ENSPEMG00000023678) #19	Strbp (ENSPEMG00000022984) #20	Rabgap1 (ENSPEMG00000022679) #21	ENSPEMG00000029320 #22	Zbtb6 (ENSPEMG00000031005) #23	Rc3h2 (ENSPEMG00000023441) #24	Pdcl (ENSPEMG00000031426) #25	Or5c1 (ENSPEMG00000009385) #26	ENSPEMG00000024732	Or1af1 (ENSPEMG00000024284)	ENSPEMG00000003122	Or1b1 (ENSPEMG00000001255)	ENSPEMG00000005435	Or1q1 (ENSPEMG00000018345)	Or1ak2 (ENSPEMG00000024654)	Or1l8 (ENSPEMG00000009607)	Or1n2 (ENSPEMG00000003779)	Or1n1b (ENSPEMG00000026783)	Or1n1 (ENSPEMG00000025964)
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000027465	ENSPEMG00000016123	Tiparp (ENSPEMG00000014866)	Ssr3 (ENSPEMG00000008767)	Kcnab1 (ENSPEMG00000020802)	ENSPEMG00000003936	ENSPEMG00000005018	Vmn2r1 (ENSPEMG00000000138)	Gmps (ENSPEMG00000009799)	Slc33a1 (ENSPEMG00000011599)	E130311K13Rik (ENSPEMG00000024310)	Plch1 (ENSPEMG00000003317)	Strit1 (ENSPEMG00000012153)	Mme (ENSPEMG00000018942)	Gpr149 (ENSPEMG00000008920)	ENSPEMG00000031240 #22	Dhx36 (ENSPEMG00000010012)	Arhgef26 (ENSPEMG00000017934)	Rap2b (ENSPEMG00000001736)	P2ry1 (ENSPEMG00000016052)	ENSPEMG00000027344	ENSPEMG00000027982	ENSPEMG00000026946	Mbnl1 (ENSPEMG00000011590)	Sucnr1 (ENSPEMG00000013535)	ENSPEMG00000005479	Aadacl2 (ENSPEMG00000000671)	ENSPEMG00000026920	Aadacl2fm3 (ENSPEMG00000031044)	ENSPEMG00000027585	ENSPEMG00000016497
Prairie vole	MODERN SPECIES	12	ENSMOCG00000010619 #9	Wdr38 (ENSMOCG00000016384) #10	Olfml2a (ENSMOCG00000006167) #11	Nr6a1 (ENSMOCG00000013647) #12	ENSMOCG00000000723	Nr5a1 (ENSMOCG00000022516) #13	ENSMOCG00000019583 #16	Nek6 (ENSMOCG00000020840) #15	Lhx2 (ENSMOCG00000018166) #17	ENSMOCG00000005120 #18	ENSMOCG00000020847 #18	Crb2 (ENSMOCG00000017592) #19	Strbp (ENSMOCG00000022231) #20	Gpr21 (ENSMOCG00000019492)	Rabgap1 (ENSMOCG00000015881) #21	Zbtb26 (ENSMOCG00000005785) #22	Zbtb6 (ENSMOCG00000003885) #23	Rc3h2 (ENSMOCG00000009592) #24	Pdcl (ENSMOCG00000005925) #25	Fzd8 (ENSMOCG00000010067)	Gjd4 (ENSMOCG00000004130)	Ccny (ENSMOCG00000022281)	ENSMOCG00000009744	ENSMOCG00000020281	ENSMOCG00000014584	Itgb1 (ENSMOCG00000019200)	Nrp1 (ENSMOCG00000002681)	Pard3 (ENSMOCG00000013254)	Rbm34 (ENSMOCG00000013550)	Tomm20 (ENSMOCG00000010595)	Irf2bp2 (ENSMOCG00000009080)
Cricetinae	ANCESTRAL SPECIES	57	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.f.e.b #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916
Chinese hamster chok1gshd	MODERN SPECIES	318	Arpc5l (ENSCGRG00001015810) #8	ENSCGRG00001016006 #9	Wdr38 (ENSCGRG00001016663) #10	Olfml2a (ENSCGRG00001016979) #11	Nr6a1 (ENSCGRG00001017242) #12	Nr5a1 (ENSCGRG00001017535) #13	Psmb7 (ENSCGRG00001020058) #16	Nek6 (ENSCGRG00001000656) #15	Lhx2 (ENSCGRG00001001336) #17	Dennd1a (ENSCGRG00001003432) #18	ENSCGRG00001013652	ENSCGRG00001004172	Crb2 (ENSCGRG00001004582) #19	Strbp (ENSCGRG00001006354) #20	Rabgap1 (ENSCGRG00001008620) #21	Zbtb26 (ENSCGRG00001009545) #22	ENSCGRG00001013848 #23	Rc3h2 (ENSCGRG00001010006) #24	Pdcl (ENSCGRG00001010795) #25	Or5c1 (ENSCGRG00001013818) #26	ENSCGRG00001010875	ENSCGRG00001013584	Or1af1 (ENSCGRG00001013629)	ENSCGRG00001013906	ENSCGRG00001013979
Golden Hamster	MODERN SPECIES	739	Golga1 (ENSMAUG00000017375) #7	Arpc5l (ENSMAUG00000020262) #8	ENSMAUG00000001728 #9	Wdr38 (ENSMAUG00000005054) #10	Olfml2a (ENSMAUG00000014419) #11	Nr6a1 (ENSMAUG00000020320) #12	Nr5a1 (ENSMAUG00000011097) #13	Psmb7 (ENSMAUG00000009541) #16	Nek6 (ENSMAUG00000014034) #15	Lhx2 (ENSMAUG00000000473) #17	ENSMAUG00000016980 #18	ENSMAUG00000015217 #18	Crb2 (ENSMAUG00000017538) #19	Strbp (ENSMAUG00000016102) #20	Rabgap1 (ENSMAUG00000014606) #21	Zbtb26 (ENSMAUG00000001114) #22	Zbtb6 (ENSMAUG00000000804) #23	Rc3h2 (ENSMAUG00000003117) #24	Pdcl (ENSMAUG00000002651) #25	Or5c1 (ENSMAUG00000006357) #26	Or1l8 (ENSMAUG00000006811)	Or1n2 (ENSMAUG00000005622)	Or1j4 (ENSMAUG00000016620)	Or1j21 (ENSMAUG00000019019)	Or1j19 (ENSMAUG00000006683)	ENSMAUG00000016503	Ptgs1 (ENSMAUG00000006589) #27	Mrrf (ENSMAUG00000003771) #28	Rbm18 (ENSMAUG00000021365) #29	Lhx6 (ENSMAUG00000017017) #30	Morn5 (ENSMAUG00000014927) #31
Upper Galilee mountains blind mole rat	MODERN SPECIES	513	Arpc5l (ENSNGAG00000004816) #8	ENSNGAG00000012132 #9	ENSNGAG00000016210	Olfml2a (ENSNGAG00000006763) #11	Nr6a1 (ENSNGAG00000019760) #12	Nr5a1 (ENSNGAG00000018329) #13	Psmb7 (ENSNGAG00000016549) #16	Nek6 (ENSNGAG00000017493) #15	Lhx2 (ENSNGAG00000013721) #17	ENSNGAG00000003822 #18	ENSNGAG00000011495 #18	Crb2 (ENSNGAG00000004692) #19	Strbp (ENSNGAG00000014638) #20	Gpr21 (ENSNGAG00000009678)	Rabgap1 (ENSNGAG00000017183) #21	Zbtb26 (ENSNGAG00000001562) #22	Zbtb6 (ENSNGAG00000021046) #23	ENSNGAG00000009763 #24	Pdcl (ENSNGAG00000005582) #25	Or5c1 (ENSNGAG00000015367) #26	ENSNGAG00000011280	ENSNGAG00000020457	ENSNGAG00000019594	ENSNGAG00000017161	ENSNGAG00000014893	Or1j4 (ENSNGAG00000019324)	ENSNGAG00000016244	Or1j1 (ENSNGAG00000014710)	ENSNGAG00000014733	ENSNGAG00000020653	Or1j21 (ENSNGAG00000016631)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	94	Golga1 (ENSJJAG00000024183) #7	Arpc5l (ENSJJAG00000013733) #8	ENSJJAG00000014897 #9	Wdr38 (ENSJJAG00000008331) #10	Olfml2a (ENSJJAG00000017354) #11	Nr6a1 (ENSJJAG00000016130) #12	Nr5a1 (ENSJJAG00000023318) #13	ENSJJAG00000020212 #16	Nek6 (ENSJJAG00000015974) #15	Lhx2 (ENSJJAG00000015440) #17	ENSJJAG00000018640 #18	Crb2 (ENSJJAG00000019604) #19	Strbp (ENSJJAG00000008449) #20	Gpr21 (ENSJJAG00000010982)	Rabgap1 (ENSJJAG00000014056) #21	ENSJJAG00000002859 #22	Zbtb6 (ENSJJAG00000007276) #23	Rc3h2 (ENSJJAG00000022376) #24	Pdcl (ENSJJAG00000011208) #25	ENSJJAG00000024210	ENSJJAG00000011225	Or1q1 (ENSJJAG00000007797)	ENSJJAG00000002221	Or1l8 (ENSJJAG00000009930)	Or1j1 (ENSJJAG00000004843)	Or1j4 (ENSJJAG00000016748)	Or1j21 (ENSJJAG00000007756)	Or1j19 (ENSJJAG00000004355)	ENSJJAG00000005426	Ptgs1 (ENSJJAG00000019097) #27	Mrrf (ENSJJAG00000012872) #28
Lesser Egyptian jerboa	MODERN SPECIES	108	ENSJJAG00000021970	Dpyd (ENSJJAG00000023195)	Ptbp2 (ENSJJAG00000023985)	ENSJJAG00000011561	Tlcd4 (ENSJJAG00000012418)	Alg14 (ENSJJAG00000006879)	Cnn3 (ENSJJAG00000009894)	Slc44a3 (ENSJJAG00000010238)	F3 (ENSJJAG00000011091)	Abcd3 (ENSJJAG00000012890)	Arhgap29 (ENSJJAG00000016273)	Abca4 (ENSJJAG00000019664)	Gclm (ENSJJAG00000022852)	Dnttip2 (ENSJJAG00000023209)	Nectin3 (ENSJJAG00000023655)	ENSJJAG00000023886 #22	ENSJJAG00000024057	Gm5485 (ENSJJAG00000024232)	Morc1 (ENSJJAG00000003792)	Trat1 (ENSJJAG00000009638)	ENSJJAG00000019280	Dzip3 (ENSJJAG00000021427)	Cip2a (ENSJJAG00000000422)	Myh15 (ENSJJAG00000011364)	Ift57 (ENSJJAG00000012277)	Cd47 (ENSJJAG00000013873)	Bbx (ENSJJAG00000015557)
Kangaroo rat	MODERN SPECIES	374	Arpc5l (ENSDORG00000027899) #8	ENSDORG00000012125 #9	Wdr38 (ENSDORG00000012116) #10	Olfml2a (ENSDORG00000013607) #11	Nr6a1 (ENSDORG00000013606) #12	Nr5a1 (ENSDORG00000028222) #13	Psmb7 (ENSDORG00000014519) #16	Nek6 (ENSDORG00000014518) #15	ENSDORG00000025549	Lhx2 (ENSDORG00000025403) #17	Dennd1a (ENSDORG00000002817) #18	Crb2 (ENSDORG00000002814) #19	ENSDORG00000012137 #20	Gpr21 (ENSDORG00000012136)	Rabgap1 (ENSDORG00000012123) #21	Zbtb26 (ENSDORG00000006402) #22	Zbtb6 (ENSDORG00000025398) #23	Rc3h2 (ENSDORG00000006398) #24	Pdcl (ENSDORG00000029509) #25	Or5c1 (ENSDORG00000025218) #26	ENSDORG00000029300
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027	ENSGT00940000154381
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990.j #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000154381.i.a.b.a.a.b.a	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990.j #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000154381.i.a.b.a.a.b.a.a	ENSGT00940000163649	ENSGT00730000111617	ENSGT00940000163103	ENSGT00940000163451
Alpin marmot	MODERN SPECIES	47	GOLGA1 (ENSMMMG00000018029) #7	ARPC5L (ENSMMMG00000018071) #8	RPL35 (ENSMMMG00000018074) #9	WDR38 (ENSMMMG00000018077) #10	OLFML2A (ENSMMMG00000018107) #11	NR6A1 (ENSMMMG00000018148) #12	NR5A1 (ENSMMMG00000018155) #13	PSMB7 (ENSMMMG00000018175) #16	NEK6 (ENSMMMG00000018189) #15	ENSMMMG00000018209 #17	DENND1A (ENSMMMG00000018266) #18	ENSMMMG00000018296	CRB2 (ENSMMMG00000018308) #19	STRBP (ENSMMMG00000018353) #20	RABGAP1 (ENSMMMG00000018398) #21	ZBTB26 (ENSMMMG00000018454) #22	ZBTB6 (ENSMMMG00000018466) #23	RC3H2 (ENSMMMG00000018470) #24	PDCL (ENSMMMG00000018517) #25	OR1K1 (ENSMMMG00000018530)	OR5C1 (ENSMMMG00000018535) #26	ENSMMMG00000018538	ENSMMMG00000018540	OR1B1 (ENSMMMG00000018546)	ENSMMMG00000018548	ENSMMMG00000018552	OR1Q1 (ENSMMMG00000018554)	ENSMMMG00000018559	OR1N2 (ENSMMMG00000018560)	OR1N1 (ENSMMMG00000018562)	OR1J4 (ENSMMMG00000018571)
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000158501 #8	ENSGT00390000016384.f.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990.j #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000154381.i.a.b.a.a.b.a.a	ENSGT00940000163649	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508
Arctic ground squirrel	MODERN SPECIES	44	GOLGA1 (ENSUPAG00010013479) #7	ARPC5L (ENSUPAG00010013460) #8	WDR38 (ENSUPAG00010013438) #10	RPL35 (ENSUPAG00010013420) #9	OLFML2A (ENSUPAG00010013389) #11	NR6A1 (ENSUPAG00010013329) #12	NR5A1 (ENSUPAG00010013310) #13	ADGRD2 (ENSUPAG00010013284) #14	PSMB7 (ENSUPAG00010013273) #16	NEK6 (ENSUPAG00010013255) #15	LHX2 (ENSUPAG00010013245) #17	DENND1A (ENSUPAG00010013123) #18	CRB2 (ENSUPAG00010013102) #19	STRBP (ENSUPAG00010012985) #20	RABGAP1 (ENSUPAG00010012857) #21	ZBTB26 (ENSUPAG00010012848) #22	ZBTB6 (ENSUPAG00010012844) #23	RC3H2 (ENSUPAG00010012762) #24	PDCL (ENSUPAG00010012754) #25	OR1K1 (ENSUPAG00010012753)	OR5C1 (ENSUPAG00010012749) #26	ENSUPAG00010012631	ENSUPAG00010012623	ENSUPAG00010012618	ENSUPAG00010012616	OR1B1 (ENSUPAG00010012614)	ENSUPAG00010012608	ENSUPAG00010012605	ENSUPAG00010012600	OR1L3 (ENSUPAG00010012599)	OR1N2 (ENSUPAG00010012597)
Squirrel	MODERN SPECIES	87	GOLGA1 (ENSSTOG00000007917) #7	ARPC5L (ENSSTOG00000007907) #8	RPL35 (ENSSTOG00000007901) #9	WDR38 (ENSSTOG00000007867) #10	OLFML2A (ENSSTOG00000007852) #11	NR6A1 (ENSSTOG00000022764) #12	NR5A1 (ENSSTOG00000000396) #13	PSMB7 (ENSSTOG00000013826) #16	NEK6 (ENSSTOG00000013817) #15	LHX2 (ENSSTOG00000000794) #17	DENND1A (ENSSTOG00000023765) #18	CRB2 (ENSSTOG00000021477) #19	STRBP (ENSSTOG00000004790) #20	GPR21 (ENSSTOG00000030817)	RABGAP1 (ENSSTOG00000004750) #21	ZBTB26 (ENSSTOG00000004739) #22	RC3H2 (ENSSTOG00000010655) #24	PDCL (ENSSTOG00000010651) #25	OR1K1 (ENSSTOG00000010649)	ENSSTOG00000012187	ENSSTOG00000020056	ENSSTOG00000010646	ENSSTOG00000029733	ENSSTOG00000029710	OR1B1 (ENSSTOG00000027976)	ENSSTOG00000020170	ENSSTOG00000023654	OR1Q1 (ENSSTOG00000011890)	OR1N2 (ENSSTOG00000019510)	OR1N1 (ENSSTOG00000023976)	OR1J4 (ENSSTOG00000030424)
Eurasian red squirrel	MODERN SPECIES	6	RPL35 (ENSSVLG00005022293) #9	WDR38 (ENSSVLG00005022161) #10	OLFML2A (ENSSVLG00005022068) #11	ENSSVLG00005022017	NR6A1 (ENSSVLG00005021745) #12	NR5A1 (ENSSVLG00005021643) #13	ADGRD2 (ENSSVLG00005021497) #14	PSMB7 (ENSSVLG00005021459) #16	NEK6 (ENSSVLG00005021363) #15	LHX2 (ENSSVLG00005021337) #17	ENSSVLG00005021279	DENND1A (ENSSVLG00005021227) #18	CRB2 (ENSSVLG00005021075) #19	STRBP (ENSSVLG00005021011) #20	RABGAP1 (ENSSVLG00005020789) #21	ZBTB26 (ENSSVLG00005020757) #22	ZBTB6 (ENSSVLG00005020741) #23	RC3H2 (ENSSVLG00005020372) #24	PDCL (ENSSVLG00005020286) #25	OR1K1 (ENSSVLG00005020263)	OR5C1 (ENSSVLG00005020239) #26	ENSSVLG00005020225	ENSSVLG00005020203	ENSSVLG00005020189	ENSSVLG00005020173	OR1L3 (ENSSVLG00005020158)	ENSSVLG00005020070	ENSSVLG00005020049	ENSSVLG00005020028	ENSSVLG00005020009	OR1Q1 (ENSSVLG00005019985)
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.e.a #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B.c #20	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00730000111617	ENSGT00940000162739	ENSGT00940000163103	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.e.a #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B.c #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163103	ENSGT00940000162739	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027	ENSGT00940000154381.g.a
Hystricomorpha_b	ANCESTRAL SPECIES	11	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.e.a #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B.c #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000162739	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027	ENSGT00940000154381.g.a	ENSGT00940000154381.h	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29
Degu	MODERN SPECIES	179	NR6A1 (ENSODEG00000004183) #12	ENSODEG00000004234	NR5A1 (ENSODEG00000004244) #13	ENSODEG00000004257 #16	ENSODEG00000019019	NEK6 (ENSODEG00000004126) #15	ENSODEG00000004179	LHX2 (ENSODEG00000004212) #17	DENND1A (ENSODEG00000004310) #18	CRB2 (ENSODEG00000004481) #19	ENSODEG00000019097	ENSODEG00000004632 #20	RABGAP1 (ENSODEG00000004811) #21	ENSODEG00000019246	ENSODEG00000019228	ZBTB26 (ENSODEG00000005887) #22	ZBTB6 (ENSODEG00000019273) #23	ENSODEG00000005918 #24	PDCL (ENSODEG00000005932) #25	ENSODEG00000006008	ENSODEG00000006020	ENSODEG00000006064
Long-tailed chinchilla	MODERN SPECIES	126	PPP6C (ENSCLAG00000013734)	SCAI (ENSCLAG00000013682)	GOLGA1 (ENSCLAG00000011649) #7	ARPC5L (ENSCLAG00000009936) #8	RPL35 (ENSCLAG00000013142) #9	OLFML2A (ENSCLAG00000014121) #11	NR6A1 (ENSCLAG00000012774) #12	NR5A1 (ENSCLAG00000012090) #13	PSMB7 (ENSCLAG00000013548) #16	NEK6 (ENSCLAG00000009797) #15	LHX2 (ENSCLAG00000010277) #17	DENND1A (ENSCLAG00000010455) #18	CRB2 (ENSCLAG00000015580) #19	STRBP (ENSCLAG00000010826) #20	RABGAP1 (ENSCLAG00000010301) #21	ZBTB26 (ENSCLAG00000016744) #22	ZBTB6 (ENSCLAG00000016422) #23	RC3H2 (ENSCLAG00000013261) #24	PDCL (ENSCLAG00000014566) #25	ENSCLAG00000017880	ENSCLAG00000018047	ENSCLAG00000017871	OR1L3 (ENSCLAG00000017806)	ENSCLAG00000014089	ENSCLAG00000017825	ENSCLAG00000015371	ENSCLAG00000016807	OR1N2 (ENSCLAG00000017933)	OR1J4 (ENSCLAG00000017809)	OR1J1 (ENSCLAG00000017743)	ENSCLAG00000017778
Guinea pig	MODERN SPECIES	27	SCAI (ENSCPOG00000001406)	GOLGA1 (ENSCPOG00000014706) #7	ARPC5L (ENSCPOG00000036902) #8	RPL35 (ENSCPOG00000022811) #9	OLFML2A (ENSCPOG00000003516) #11	NR6A1 (ENSCPOG00000005970) #12	NR5A1 (ENSCPOG00000022305) #13	ADGRD2 (ENSCPOG00000027184) #14	PSMB7 (ENSCPOG00000007839) #16	NEK6 (ENSCPOG00000007827) #15	LHX2 (ENSCPOG00000022927) #17	DENND1A (ENSCPOG00000014548) #18	CRB2 (ENSCPOG00000010074) #19	STRBP (ENSCPOG00000009817) #20	RABGAP1 (ENSCPOG00000009811) #21	ZBTB26 (ENSCPOG00000032601) #22	ZBTB6 (ENSCPOG00000039487) #23	RC3H2 (ENSCPOG00000008511) #24	PDCL (ENSCPOG00000009509) #25	OR5C1 (ENSCPOG00000001175) #26	ENSCPOG00000024385	ENSCPOG00000023130	ENSCPOG00000013079	OR1B1 (ENSCPOG00000021126)	ENSCPOG00000022961	ENSCPOG00000040622	ENSCPOG00000032036	ENSCPOG00000030587	OR1J4 (ENSCPOG00000039868)	OR1J1 (ENSCPOG00000032070)	ENSCPOG00000039698
Naked mole-rat female	MODERN SPECIES	3	SCAI (ENSHGLG00000011703)	GOLGA1 (ENSHGLG00000012081) #7	ARPC5L (ENSHGLG00000012246) #8	ENSHGLG00000035609 #9	OLFML2A (ENSHGLG00000012516) #11	NR6A1 (ENSHGLG00000012869) #12	NR5A1 (ENSHGLG00000042870) #13	PSMB7 (ENSHGLG00000013424) #16	NEK6 (ENSHGLG00000013776) #15	LHX2 (ENSHGLG00000014024) #17	DENND1A (ENSHGLG00000014439) #18	CRB2 (ENSHGLG00000014737) #19	ENSHGLG00000014962 #20	RABGAP1 (ENSHGLG00000010853) #21	GPR21 (ENSHGLG00000033657)	ZBTB26 (ENSHGLG00000011691) #22	ZBTB6 (ENSHGLG00000011851) #23	RC3H2 (ENSHGLG00000012014) #24	ENSHGLG00000020904	PDCL (ENSHGLG00000038582) #25	OR5C1 (ENSHGLG00000018024) #26	ENSHGLG00000020650	ENSHGLG00000020543	ENSHGLG00000020733	OR1L3 (ENSHGLG00000020769)	ENSHGLG00000010749	ENSHGLG00000039540	ENSHGLG00000042559	ENSHGLG00000036598	OR1N1 (ENSHGLG00000020665)	OR1J4 (ENSHGLG00000047494)
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000165929	ENSGT00730000111617	ENSGT00940000163451	ENSGT00940000163103
Arabian camel	MODERN SPECIES	30	GOLGA1 (ENSCDRG00005016743) #7	ARPC5L (ENSCDRG00005016882) #8	ENSCDRG00005016937 #9	WDR38 (ENSCDRG00005016977) #10	OLFML2A (ENSCDRG00005017022) #11	NR6A1 (ENSCDRG00005017082) #12	NR5A1 (ENSCDRG00005006378) #13	ADGRD2 (ENSCDRG00005006465) #14	PSMB7 (ENSCDRG00005006562) #16	NEK6 (ENSCDRG00005006640) #15	ENSCDRG00005006859 #17	DENND1A (ENSCDRG00005006927) #18	CRB2 (ENSCDRG00005007355) #19	STRBP (ENSCDRG00005007449) #20	RABGAP1 (ENSCDRG00005007528) #21	ZBTB26 (ENSCDRG00005007665) #22	ZBTB6 (ENSCDRG00005007683) #23	RC3H2 (ENSCDRG00005007722) #24	PDCL (ENSCDRG00005007891) #25	OR1K1 (ENSCDRG00005007911)	OR5C1 (ENSCDRG00005007927) #26	ENSCDRG00005007955	ENSCDRG00005008008	OR1L3 (ENSCDRG00005008027)	OR1L1 (ENSCDRG00005008045)	OR1B1 (ENSCDRG00005008054)	ENSCDRG00005008062	OR1Q1 (ENSCDRG00005008121)	ENSCDRG00005008134	ENSCDRG00005008147	OR1N1 (ENSCDRG00005008156)
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254	ENSGT00930000151076
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916.v	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.b	ENSGT00940000161916.u	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.b	ENSGT00940000161916.u	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254
Caprinae	ANCESTRAL SPECIES	27	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B.j #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.b	ENSGT00940000161916.u	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a
Goat	MODERN SPECIES	2	RPL35 (ENSCHIG00000012200) #9	WDR38 (ENSCHIG00000022520) #10	OLFML2A (ENSCHIG00000023813) #11	ENSCHIG00000016762	NR6A1 (ENSCHIG00000023004) #12	NR5A1 (ENSCHIG00000020020) #13	ADGRD2 (ENSCHIG00000015493) #14	PSMB7 (ENSCHIG00000016023) #16	NEK6 (ENSCHIG00000014014) #15	LHX2 (ENSCHIG00000024662) #17	DENND1A (ENSCHIG00000018070) #18	CRB2 (ENSCHIG00000026311) #19	ENSCHIG00000018517 #20	ENSCHIG00000024016	RABGAP1 (ENSCHIG00000025375) #21	ZBTB26 (ENSCHIG00000002998) #22	ZBTB6 (ENSCHIG00000010695) #23	RC3H2 (ENSCHIG00000019319) #24	PDCL (ENSCHIG00000023505) #25	OR5C1 (ENSCHIG00000003066) #26	ENSCHIG00000008677	OR1L1 (ENSCHIG00000013814)	ENSCHIG00000009580	ENSCHIG00000008809	ENSCHIG00000010834	OR1Q1 (ENSCHIG00000012780)	ENSCHIG00000016694	ENSCHIG00000007899	ENSCHIG00000010146	ENSCHIG00000011917	ENSCHIG00000004926
Rambouillet Sheep	MODERN SPECIES	19	WDR38 (ENSOARG00020008607) #10	OLFML2A (ENSOARG00020008739) #11	NR6A1 (ENSOARG00020008843) #12	NR5A1 (ENSOARG00020009154) #13	ADGRD2 (ENSOARG00020009282) #14	PSMB7 (ENSOARG00020009676) #16	NEK6 (ENSOARG00020009766) #15	ENSOARG00020010162 #17	ENSOARG00020010288	ENSOARG00020010352	ENSOARG00020010373	DENND1A (ENSOARG00020010453) #18	CRB2 (ENSOARG00020011470) #19	STRBP (ENSOARG00020011671) #20	RABGAP1 (ENSOARG00020011787) #21	ZBTB26 (ENSOARG00020012054) #22	ZBTB6 (ENSOARG00020012077) #23	RC3H2 (ENSOARG00020012162) #24	PDCL (ENSOARG00020012771) #25	OR5C1 (ENSOARG00020012869) #26	ENSOARG00020012899	ENSOARG00020012939	ENSOARG00020013003	ENSOARG00020013104	ENSOARG00020013202	ENSOARG00020013229	OR1L3 (ENSOARG00020013265)	OR1L1 (ENSOARG00020013291)	OR1Q1 (ENSOARG00020013320)	ENSOARG00020013363	ENSOARG00020013388
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00390000011666.h.a.a.b.a.a.b	ENSGT00390000003248.a.a.b	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00950000182922.a.b.e.a	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.m	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
American bison	MODERN SPECIES	3342	ENSBBBG00000007694	PPCS (ENSBBBG00000009532)	ZMYND12 (ENSBBBG00000009529)	RIMKLA (ENSBBBG00000001542)	FOXJ3 (ENSBBBG00000009523)	GUCA2A (ENSBBBG00000009517)	GUCA2B (ENSBBBG00000009516)	ENSBBBG00000009514	HIVEP3 (ENSBBBG00000001537)	EDN2 (ENSBBBG00000009510)	FOXO6 (ENSBBBG00000001535)	ENSBBBG00000001528	SCMH1 (ENSBBBG00000009494)	SLFNL1 (ENSBBBG00000009467)	CTPS1 (ENSBBBG00000001514)	ENSBBBG00000001511 #22	KCNQ4 (ENSBBBG00000009444)	NFYC (ENSBBBG00000007388)	RIMS3 (ENSBBBG00000009436)	ENSBBBG00000001503	ZNF684 (ENSBBBG00000009434)	EXO5 (ENSBBBG00000001501)	ZFP69 (ENSBBBG00000001500)	ENSBBBG00000001499	ENSBBBG00000007872	SMAP2 (ENSBBBG00000009431)	COL9A2 (ENSBBBG00000001498)	ZMPSTE24 (ENSBBBG00000008896)	TMCO2 (ENSBBBG00000001497)	RLF (ENSBBBG00000001496)	PPT1 (ENSBBBG00000009427)
Bos	ANCESTRAL SPECIES	5	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00390000011666.h.a.a.b.a.a.b	ENSGT00390000003248.a.a.b	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00950000182922.a.b.e.a	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.m	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00390000011666.h.a.a.b.a.a.b	ENSGT00390000003248.a.a.b	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00950000182922.a.b.e.a	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.m	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916.v.b	ENSGT00940000163456.n.a	ENSGT00940000165463.b	ENSGT00940000165463.a	ENSGT00940000163223	ENSGT00940000164453.b	ENSGT00940000164453.a
Cow	MODERN SPECIES	2	OLFML2A (ENSBTAG00000004848) #11	NR6A1 (ENSBTAG00000040585) #12	NR5A1 (ENSBTAG00000009017) #13	ADGRD2 (ENSBTAG00000017576) #14	PSMB7 (ENSBTAG00000003067) #16	NEK6 (ENSBTAG00000019470) #15	LHX2 (ENSBTAG00000010990) #17	ENSBTAG00000023860	ENSBTAG00000048688	DENND1A (ENSBTAG00000003610) #18	CRB2 (ENSBTAG00000014391) #19	STRBP (ENSBTAG00000021921) #20	ENSBTAG00000048537	GPR21 (ENSBTAG00000040296)	RABGAP1 (ENSBTAG00000039172) #21	ZBTB26 (ENSBTAG00000038610) #22	ZBTB6 (ENSBTAG00000039815) #23	RC3H2 (ENSBTAG00000023867) #24	PDCL (ENSBTAG00000030675) #25	OR1K1 (ENSBTAG00000030676)	OR5C1 (ENSBTAG00000038249) #26	OR1AH6 (ENSBTAG00000030677)	OR1AF1 (ENSBTAG00000004667)	OR1AF3 (ENSBTAG00000038665)	OR1L6 (ENSBTAG00000052523)	OR1L6C (ENSBTAG00000049303)	OR1L4 (ENSBTAG00000050629)	OR1L19 (ENSBTAG00000048218)	OR1L1 (ENSBTAG00000001549)	OR1L22 (ENSBTAG00000049925)	OR1B1 (ENSBTAG00000045528)
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005017999	NR6A1 (ENSBIXG00005018129) #12	NR5A1 (ENSBIXG00005007287) #13	ADGRD2 (ENSBIXG00005018218) #14	ENSBIXG00005018237 #16	NEK6 (ENSBIXG00005018334) #15	LHX2 (ENSBIXG00005018376) #17	ENSBIXG00005018399	ENSBIXG00005018414	DENND1A (ENSBIXG00005018546) #18	CRB2 (ENSBIXG00005007721) #19	STRBP (ENSBIXG00005003042) #20	ENSBIXG00005018783	GPR21 (ENSBIXG00005018797)	RABGAP1 (ENSBIXG00005005857) #21	ZBTB26 (ENSBIXG00005018935) #22	ZBTB6 (ENSBIXG00005003085) #23	RC3H2 (ENSBIXG00005019119) #24	PDCL (ENSBIXG00005019164) #25	OR1K1 (ENSBIXG00005019174)	OR5C1 (ENSBIXG00005019185) #26	ENSBIXG00005019201	ENSBIXG00005003131	ENSBIXG00005019218	OR1L3 (ENSBIXG00005019231)	OR1L1 (ENSBIXG00005003133)	ENSBIXG00005019264	ENSBIXG00005005442	ENSBIXG00005019276	ENSBIXG00005019284	ENSBIXG00005003135
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000157920.a #22
Domestic yak	MODERN SPECIES	22	RIMKLA (ENSBGRG00000013342)	FOXJ3 (ENSBGRG00000013409)	GUCA2A (ENSBGRG00000013890)	ENSBGRG00000013948	ENSBGRG00000014026	ENSBGRG00000014045	ENSBGRG00000014074	ENSBGRG00000014097	HIVEP3 (ENSBGRG00000014136)	EDN2 (ENSBGRG00000014386)	FOXO6 (ENSBGRG00000014468)	SCMH1 (ENSBGRG00000014563)	ENSBGRG00000016010	ENSBGRG00000016036	CTPS1 (ENSBGRG00000016063)	ENSBGRG00000016202 #22	ENSBGRG00000016241	CITED4 (ENSBGRG00000016268)	KCNQ4 (ENSBGRG00000016298)	NFYC (ENSBGRG00000016660)	RIMS3 (ENSBGRG00000016850)	ENSBGRG00000016909	ZNF684 (ENSBGRG00000016941)	EXO5 (ENSBGRG00000017012)	ZFP69 (ENSBGRG00000017030)	ENSBGRG00000017070	SMAP2 (ENSBGRG00000017114)	COL9A2 (ENSBGRG00000017451)	ZMPSTE24 (ENSBGRG00000017914)	ENSBGRG00000018213	TMCO2 (ENSBGRG00000000230)
Siberian musk deer	MODERN SPECIES	1178	GOLGA1 (ENSMMSG00000018093) #7	ARPC5L (ENSMMSG00000018050) #8	ENSMMSG00000018016 #9	WDR38 (ENSMMSG00000017949) #10	OLFML2A (ENSMMSG00000017889) #11	NR6A1 (ENSMMSG00000017835) #12	NR5A1 (ENSMMSG00000017732) #13	ADGRD2 (ENSMMSG00000017611) #14	PSMB7 (ENSMMSG00000017573) #16	NEK6 (ENSMMSG00000017451) #15	LHX2 (ENSMMSG00000017407) #17	DENND1A (ENSMMSG00000017330) #18	CRB2 (ENSMMSG00000017268) #19	STRBP (ENSMMSG00000017220) #20	RABGAP1 (ENSMMSG00000017143) #21	ZBTB26 (ENSMMSG00000017133) #22	ZBTB6 (ENSMMSG00000017128) #23	RC3H2 (ENSMMSG00000016952) #24	PDCL (ENSMMSG00000016923) #25	OR1K1 (ENSMMSG00000016908)	OR5C1 (ENSMMSG00000016896) #26	ENSMMSG00000016829	ENSMMSG00000016804	ENSMMSG00000016791	ENSMMSG00000016782	ENSMMSG00000016765	ENSMMSG00000016756	ENSMMSG00000016749	OR1L1 (ENSMMSG00000016716)	ENSMMSG00000016679	ENSMMSG00000016673
Yarkand deer	MODERN SPECIES	2	GOLGA1 (ENSCHYG00000011987) #7	ARPC5L (ENSCHYG00000011918) #8	RPL35 (ENSCHYG00000011873) #9	WDR38 (ENSCHYG00000011690) #10	OLFML2A (ENSCHYG00000011623) #11	NR6A1 (ENSCHYG00000011423) #12	NR5A1 (ENSCHYG00000011305) #13	ADGRD2 (ENSCHYG00000011162) #14	PSMB7 (ENSCHYG00000011100) #16	NEK6 (ENSCHYG00000010901) #15	LHX2 (ENSCHYG00000010827) #17	DENND1A (ENSCHYG00000010670) #18	CRB2 (ENSCHYG00000010614) #19	ENSCHYG00000010458 #20	RABGAP1 (ENSCHYG00000010191) #21	ZBTB26 (ENSCHYG00000010162) #22	ZBTB6 (ENSCHYG00000010148) #23	RC3H2 (ENSCHYG00000009870) #24	ENSCHYG00000009825	PDCL (ENSCHYG00000009804) #25	OR1K1 (ENSCHYG00000009782)	OR5C1 (ENSCHYG00000009759) #26	ENSCHYG00000009698	ENSCHYG00000009658	ENSCHYG00000009633	OR1L3 (ENSCHYG00000009607)	OR1L1 (ENSCHYG00000009579)	ENSCHYG00000009562	OR1B1 (ENSCHYG00000009530)	ENSCHYG00000009511	ENSCHYG00000009379
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT00940000162852.b.a	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000162852.b.a	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B.b.a
Sperm whale	MODERN SPECIES	20	GOLGA1 (ENSPCTG00005012337) #7	ARPC5L (ENSPCTG00005012408) #8	RPL35 (ENSPCTG00005012446) #9	OLFML2A (ENSPCTG00005012507) #11	NR6A1 (ENSPCTG00005012676) #12	NR5A1 (ENSPCTG00005013087) #13	ENSPCTG00005013273 #14	PSMB7 (ENSPCTG00005013513) #16	LHX2 (ENSPCTG00005013579) #17	DENND1A (ENSPCTG00005013710) #18	ENSPCTG00005014157	ENSPCTG00005014200	CRB2 (ENSPCTG00005014259) #19	STRBP (ENSPCTG00005014427) #20	RABGAP1 (ENSPCTG00005014497) #21	ZBTB26 (ENSPCTG00005014658) #22	ZBTB6 (ENSPCTG00005014671) #23	RC3H2 (ENSPCTG00005014694) #24	PDCL (ENSPCTG00005014807) #25	PTGS1 (ENSPCTG00005015161) #27	MRRF (ENSPCTG00005015426) #28	ENSPCTG00005015616	RBM18 (ENSPCTG00005015688) #29	NDUFA8 (ENSPCTG00005015736) #32	ENSPCTG00005015821 #33	ENSPCTG00005015853 #33	ENSPCTG00005015883	GLT6D1 (ENSPCTG00005015920)	STOM (ENSPCTG00005015970) #36	GSN (ENSPCTG00005016041) #37	RAB14 (ENSPCTG00005017021)
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000162852.b.a	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B.b.a	ENSGT01030000234614.B.a.a.a #36
Dolphin	MODERN SPECIES	973													STRBP (ENSTTRG00000016960) #20	GPR21 (ENSTTRG00000016959)	RABGAP1 (ENSTTRG00000016958) #21	ZBTB26 (ENSTTRG00000016957) #22	ZBTB6 (ENSTTRG00000016956) #23	RC3H2 (ENSTTRG00000016954) #24	PDCL (ENSTTRG00000016953) #25
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000162852.b.a	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00390000012138.a.b.t.bb.a.a.c	ENSGT00950000182858.B.b.a
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000162852.b.a	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00390000012138.a.b.t.bb.a.a.c	ENSGT00950000182858.B.b.a
Beluga whale	MODERN SPECIES	19	ARPC5L (ENSDLEG00000015658) #8	RPL35 (ENSDLEG00000015667) #9	OLFML2A (ENSDLEG00000015685) #11	NR6A1 (ENSDLEG00000015711) #12	ENSDLEG00000015771	NR5A1 (ENSDLEG00000015804) #13	PSMB7 (ENSDLEG00000000050) #16	NEK6 (ENSDLEG00000000066) #15	LHX2 (ENSDLEG00000000097) #17	DENND1A (ENSDLEG00000000198) #18	ENSDLEG00000000331	ENSDLEG00000000352	CRB2 (ENSDLEG00000000376) #19	STRBP (ENSDLEG00000000427) #20	RABGAP1 (ENSDLEG00000000486) #21	ZBTB26 (ENSDLEG00000000549) #22	RC3H2 (ENSDLEG00000000584) #24	PDCL (ENSDLEG00000000624) #25	ENSDLEG00000000638	OR5C1 (ENSDLEG00000000653) #26	PTGS1 (ENSDLEG00000000675) #27	MRRF (ENSDLEG00000000707) #28	RBM18 (ENSDLEG00000000722) #29	LHX6 (ENSDLEG00000000734) #30	MORN5 (ENSDLEG00000000753)	NDUFA8 (ENSDLEG00000000764) #32	TTLL11 (ENSDLEG00000000788) #33	DAB2IP (ENSDLEG00000000870) #34	ENSDLEG00000001018	GLT6D1 (ENSDLEG00000001042)	ENSDLEG00000001079
Narwhal	MODERN SPECIES	312	ARPC5L (ENSMMNG00015019410) #8	RPL35 (ENSMMNG00015019387) #9	OLFML2A (ENSMMNG00015019345) #11	NR6A1 (ENSMMNG00015019302) #12	NR5A1 (ENSMMNG00015019244) #13	ADGRD2 (ENSMMNG00015019194) #14	PSMB7 (ENSMMNG00015019159) #16	NEK6 (ENSMMNG00015019045) #15	ENSMMNG00015018990 #17	ENSMMNG00015018977	ENSMMNG00015018954	DENND1A (ENSMMNG00015018918) #18	CRB2 (ENSMMNG00015018867) #19	STRBP (ENSMMNG00015018777) #20	RABGAP1 (ENSMMNG00015018694) #21	ZBTB26 (ENSMMNG00015018669) #22	ZBTB6 (ENSMMNG00015018659) #23	RC3H2 (ENSMMNG00015018607) #24	PDCL (ENSMMNG00015018554) #25	PTGS1 (ENSMMNG00015018448) #27	MRRF (ENSMMNG00015018364) #28	RBM18 (ENSMMNG00015018256) #29	LHX6 (ENSMMNG00015018081) #30	MORN5 (ENSMMNG00015017987) #31	NDUFA8 (ENSMMNG00015017957) #32	TTLL11 (ENSMMNG00015017872) #33	DAB2IP (ENSMMNG00015017613) #34	ENSMMNG00015017437	ENSMMNG00015017403	ENSMMNG00015017352	STOM (ENSMMNG00015017324) #36
Vaquita	MODERN SPECIES	17	ARPC5L (ENSPSNG00000014993) #8	RPL35 (ENSPSNG00000015051) #9	OLFML2A (ENSPSNG00000015295) #11	NR6A1 (ENSPSNG00000015414) #12	ENSPSNG00000015665	NR5A1 (ENSPSNG00000015697) #13	PSMB7 (ENSPSNG00000015876) #16	NEK6 (ENSPSNG00000015982) #15	LHX2 (ENSPSNG00000016296) #17	DENND1A (ENSPSNG00000016381) #18	ENSPSNG00000016443	CRB2 (ENSPSNG00000016494) #19	ENSPSNG00000016590	STRBP (ENSPSNG00000016661) #20	RABGAP1 (ENSPSNG00000016790) #21	ZBTB26 (ENSPSNG00000016851) #22	ZBTB6 (ENSPSNG00000016879) #23	RC3H2 (ENSPSNG00000016932) #24	PDCL (ENSPSNG00000017032) #25	ENSPSNG00000017078	OR5C1 (ENSPSNG00000017144) #26	ENSPSNG00000017400	PTGS1 (ENSPSNG00000017445) #27	MRRF (ENSPSNG00000017709) #28	RBM18 (ENSPSNG00000017818) #29	LHX6 (ENSPSNG00000017880) #30	MORN5 (ENSPSNG00000018254) #31	NDUFA8 (ENSPSNG00000018354) #32	TTLL11 (ENSPSNG00000018407) #33	DAB2IP (ENSPSNG00000018624) #34	ENSPSNG00000018840
Blue whale	MODERN SPECIES	17	ARPC5L (ENSBMSG00010002727) #8	RPL35 (ENSBMSG00010002712) #9	WDR38 (ENSBMSG00010002692) #10	OLFML2A (ENSBMSG00010002654) #11	NR6A1 (ENSBMSG00010002572) #12	NR5A1 (ENSBMSG00010002525) #13	PSMB7 (ENSBMSG00010002486) #16	NEK6 (ENSBMSG00010002464) #15	ENSBMSG00010002438 #17	ENSBMSG00010002423	ENSBMSG00010002405	DENND1A (ENSBMSG00010002298) #18	CRB2 (ENSBMSG00010002237) #19	STRBP (ENSBMSG00010002189) #20	RABGAP1 (ENSBMSG00010002113) #21	ZBTB26 (ENSBMSG00010002083) #22	ZBTB6 (ENSBMSG00010002076) #23	RC3H2 (ENSBMSG00010002002) #24	PDCL (ENSBMSG00010001965) #25	OR1K1 (ENSBMSG00010001958)	ENSBMSG00010001936	ENSBMSG00010001927	ENSBMSG00010001916	PTGS1 (ENSBMSG00010001760) #27	MRRF (ENSBMSG00010001690) #28	RBM18 (ENSBMSG00010001663) #29	LHX6 (ENSBMSG00010001363) #30	MORN5 (ENSBMSG00010001290) #31	NDUFA8 (ENSBMSG00010001269) #32	TTLL11 (ENSBMSG00010001244) #33	DAB2IP (ENSBMSG00010000948) #34
Suina	ANCESTRAL SPECIES	37	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163038.a.b.o	ENSGT00940000162508.c.a.b	ENSGT00940000163456	ENSGT00940000163223	ENSGT00730000111617
Pig	MODERN SPECIES		ARPC5L (ENSSSCG00000005596) #8	RPL35 (ENSSSCG00000034227) #9	WDR38 (ENSSSCG00000005594) #10	OLFML2A (ENSSSCG00000005593) #11	ENSSSCG00000058119	NR6A1 (ENSSSCG00000005589) #12	NR5A1 (ENSSSCG00000005588) #13	ADGRD2 (ENSSSCG00000005591) #14	PSMB7 (ENSSSCG00000005590) #16	NEK6 (ENSSSCG00000005587) #15	LHX2 (ENSSSCG00000005586) #17	DENND1A (ENSSSCG00000005585) #18	CRB2 (ENSSSCG00000005584) #19	STRBP (ENSSSCG00000005582) #20	RABGAP1 (ENSSSCG00000020743) #21	ZBTB26 (ENSSSCG00000032575) #22	ZBTB6 (ENSSSCG00000005576) #23	RC3H2 (ENSSSCG00000005575) #24	PDCL (ENSSSCG00000038554) #25	OR1K1 (ENSSSCG00000039297)	OR5C1 (ENSSSCG00000005578) #26	ENSSSCG00000044533	ENSSSCG00000055627	ENSSSCG00000055555	ENSSSCG00000059550	ENSSSCG00000056140	ENSSSCG00000035439	ENSSSCG00000055994	ENSSSCG00000061670	ENSSSCG00000051496	ENSSSCG00000026287
Chacoan peccary	MODERN SPECIES	887	GOLGA1 (ENSCWAG00000015995) #7	ARPC5L (ENSCWAG00000016051) #8	ENSCWAG00000016078 #9	WDR38 (ENSCWAG00000016114) #10	OLFML2A (ENSCWAG00000016191) #11	NR6A1 (ENSCWAG00000016277) #12	NR5A1 (ENSCWAG00000016562) #13	ADGRD2 (ENSCWAG00000016668) #14	PSMB7 (ENSCWAG00000016793) #16	NEK6 (ENSCWAG00000016836) #15	LHX2 (ENSCWAG00000016921) #17	DENND1A (ENSCWAG00000016950) #18	CRB2 (ENSCWAG00000017032) #19	STRBP (ENSCWAG00000017145) #20	RABGAP1 (ENSCWAG00000017187) #21	ZBTB26 (ENSCWAG00000017216) #22	ZBTB6 (ENSCWAG00000017232) #23	RC3H2 (ENSCWAG00000017257) #24	PDCL (ENSCWAG00000017304) #25	OR1K1 (ENSCWAG00000017328)	OR5C1 (ENSCWAG00000017342) #26	ENSCWAG00000017362	ENSCWAG00000017381	ENSCWAG00000017637	ENSCWAG00000017690	ENSCWAG00000017712	ENSCWAG00000017736	ENSCWAG00000017767	ENSCWAG00000017796	ENSCWAG00000017812	ENSCWAG00000017821
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000165463	ENSGT01100000264118	ENSGT00940000165018	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31
Red fox	MODERN SPECIES	77	SCAI (ENSVVUG00000009995)	GOLGA1 (ENSVVUG00000009974) #7	ARPC5L (ENSVVUG00000009965) #8	RPL35 (ENSVVUG00000009948) #9	WDR38 (ENSVVUG00000009939) #10	OLFML2A (ENSVVUG00000009902) #11	NR6A1 (ENSVVUG00000009870) #12	NR5A1 (ENSVVUG00000009804) #13	PSMB7 (ENSVVUG00000009795) #16	NEK6 (ENSVVUG00000009771) #15	LHX2 (ENSVVUG00000009751) #17	DENND1A (ENSVVUG00000009688) #18	CRB2 (ENSVVUG00000009672) #19	STRBP (ENSVVUG00000009636) #20	RABGAP1 (ENSVVUG00000009567) #21	ZBTB26 (ENSVVUG00000009562) #22	ZBTB6 (ENSVVUG00000009554) #23	RC3H2 (ENSVVUG00000009519) #24	PDCL (ENSVVUG00000009506) #25	OR1K1 (ENSVVUG00000009503)	OR5C1 (ENSVVUG00000009500) #26	ENSVVUG00000009495	ENSVVUG00000009488	ENSVVUG00000009484	ENSVVUG00000009478	ENSVVUG00000009474	ENSVVUG00000009471	ENSVVUG00000009467	PTGS1 (ENSVVUG00000009459) #27	ENSVVUG00000009453	MRRF (ENSVVUG00000009449) #28
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000165463	ENSGT01100000264118	ENSGT00940000162739	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30
Dingo	MODERN SPECIES	327	SCAI (ENSCAFG00020015613)	GOLGA1 (ENSCAFG00020015604) #7	ARPC5L (ENSCAFG00020015602) #8	ENSCAFG00020015596 #9	WDR38 (ENSCAFG00020015590) #10	OLFML2A (ENSCAFG00020015588) #11	NR6A1 (ENSCAFG00020015583) #12	NR5A1 (ENSCAFG00020015577) #13	PSMB7 (ENSCAFG00020015572) #16	NEK6 (ENSCAFG00020015571) #15	LHX2 (ENSCAFG00020015565) #17	DENND1A (ENSCAFG00020015553) #18	CRB2 (ENSCAFG00020015541) #19	STRBP (ENSCAFG00020015377) #20	RABGAP1 (ENSCAFG00020015350) #21	ZBTB26 (ENSCAFG00020015344) #22	ZBTB6 (ENSCAFG00020015343) #23	RC3H2 (ENSCAFG00020015288) #24	PDCL (ENSCAFG00020015282) #25	OR1K1 (ENSCAFG00020015278)	OR5C1 (ENSCAFG00020015275) #26	ENSCAFG00020015271	ENSCAFG00020015267	ENSCAFG00020015260	ENSCAFG00020015255	ENSCAFG00020015252	ENSCAFG00020015249	ENSCAFG00020015247	ENSCAFG00020015245	ENSCAFG00020015237	PTGS1 (ENSCAFG00020015185) #27
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.p	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.o	ENSGT00940000163456.p	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000163223	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000164886	ENSGT00940000163103
Ferret	MODERN SPECIES	218	RPL35 (ENSMPUG00000013950) #9	WDR38 (ENSMPUG00000013960) #10	OLFML2A (ENSMPUG00000013962) #11	NR6A1 (ENSMPUG00000013965) #12	ENSMPUG00000013968	NR5A1 (ENSMPUG00000013973) #13	ADGRD2 (ENSMPUG00000013976) #14	PSMB7 (ENSMPUG00000013994) #16	NEK6 (ENSMPUG00000013997) #15	ENSMPUG00000014039	LHX2 (ENSMPUG00000014042) #17	DENND1A (ENSMPUG00000014047) #18	CRB2 (ENSMPUG00000014059) #19	STRBP (ENSMPUG00000014119) #20	RABGAP1 (ENSMPUG00000014129) #21	ZBTB26 (ENSMPUG00000019237) #22	RC3H2 (ENSMPUG00000014141) #24	PDCL (ENSMPUG00000014149) #25	OR1K1 (ENSMPUG00000019240)	OR5C1 (ENSMPUG00000019243) #26	ENSMPUG00000019248	ENSMPUG00000019253	ENSMPUG00000019255	ENSMPUG00000019259	ENSMPUG00000019263
American mink	MODERN SPECIES	182	SCAI (ENSNVIG00000005835)	GOLGA1 (ENSNVIG00000005806) #7	ARP5L (ENSNVIG00000005786) #8	RPL35 (ENSNVIG00000005757) #9	WDR38 (ENSNVIG00000005737) #10	OLFML2A (ENSNVIG00000005683) #11	NR6A1 (ENSNVIG00000005633) #12	NR5A1 (ENSNVIG00000005527) #13	PSMB7 (ENSNVIG00000005110) #16	NEK6 (ENSNVIG00000005066) #15	LHX2 (ENSNVIG00000005036) #17	DENND1A (ENSNVIG00000004449) #18	CRB2 (ENSNVIG00000004241) #19	STRBP (ENSNVIG00000004078) #20	RABGAP1 (ENSNVIG00000003705) #21	ZBT26 (ENSNVIG00000003603) #22	ZBTB6 (ENSNVIG00000003569) #23	RC3H2 (ENSNVIG00000003205) #24	PHLP (ENSNVIG00000003114) #25	OR1K1 (ENSNVIG00000003072)	OR5C1 (ENSNVIG00000003045) #26
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419.h #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.o	ENSGT00940000163456.p	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463	ENSGT01100000263600.a.a	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419.h #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.o	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916	ENSGT01100000263600.a.a	ENSGT00940000163223.i	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649
Polar bear	MODERN SPECIES	214	PPP6C (ENSUMAG00000002283)	SCAI (ENSUMAG00000002651)	GOLGA1 (ENSUMAG00000002704) #7	ENSUMAG00000002970 #8	RPL35 (ENSUMAG00000002978) #9	WDR38 (ENSUMAG00000002982) #10	OLFML2A (ENSUMAG00000002991) #11	NR6A1 (ENSUMAG00000003006) #12	PSMB7 (ENSUMAG00000003020) #16	NEK6 (ENSUMAG00000003025) #15	LHX2 (ENSUMAG00000003040) #17	ENSUMAG00000003051 #18	ENSUMAG00000003058 #18	STRBP (ENSUMAG00000003090) #20	RABGAP1 (ENSUMAG00000003106) #21	ZBTB26 (ENSUMAG00000003128) #22	ZBTB6 (ENSUMAG00000003133) #23	RC3H2 (ENSUMAG00000003161) #24	PDCL (ENSUMAG00000003307) #25	OR1K1 (ENSUMAG00000003312)	OR5C1 (ENSUMAG00000003313) #26	ENSUMAG00000003316	ENSUMAG00000003321	ENSUMAG00000003328	ENSUMAG00000003329	ENSUMAG00000003332	OR1L1 (ENSUMAG00000003334)	OR1B1 (ENSUMAG00000003338)	ENSUMAG00000003343	OR1Q1 (ENSUMAG00000003345)	ENSUMAG00000003347
American black bear	MODERN SPECIES	640														STRBP (ENSUAMG00000015372) #20	RABGAP1 (ENSUAMG00000015364) #21	ZBTB26 (ENSUAMG00000015363) #22	ZBTB6 (ENSUAMG00000015362) #23	RC3H2 (ENSUAMG00000015355) #24	PDCL (ENSUAMG00000015352) #25	OR1K1 (ENSUAMG00000015349)	OR5C1 (ENSUAMG00000015348) #26	ENSUAMG00000015345	ENSUAMG00000015344
Giant Panda	MODERN SPECIES	17	SCAI (ENSAMEG00000026864)	GOLGA1 (ENSAMEG00000016553) #7	ENSAMEG00000016540 #8	RPL35 (ENSAMEG00000016537) #9	WDR38 (ENSAMEG00000029862) #10	OLFML2A (ENSAMEG00000016521) #11	NR6A1 (ENSAMEG00000011212) #12	NR5A1 (ENSAMEG00000027142) #13	PSMB7 (ENSAMEG00000011136) #16	NEK6 (ENSAMEG00000011113) #15	LHX2 (ENSAMEG00000011089) #17	DENND1A (ENSAMEG00000011077) #18	CRB2 (ENSAMEG00000011056) #19	STRBP (ENSAMEG00000011017) #20	RABGAP1 (ENSAMEG00000010958) #21	ZBTB26 (ENSAMEG00000030781) #22	ZBTB6 (ENSAMEG00000027846) #23	RC3H2 (ENSAMEG00000006498) #24	PDCL (ENSAMEG00000024729) #25	OR1K1 (ENSAMEG00000018728)	OR5C1 (ENSAMEG00000018726) #26	ENSAMEG00000019631	ENSAMEG00000028263	ENSAMEG00000024438	ENSAMEG00000028985	ENSAMEG00000002589	OR1L3 (ENSAMEG00000019647)	OR1L1 (ENSAMEG00000016163)	OR1B1 (ENSAMEG00000019005)	ENSAMEG00000018984	OR1Q1 (ENSAMEG00000018970)
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000153772.B #7	ENSGT00940000158501.y #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000165463.f	ENSGT00940000161916	ENSGT00940000165463.e	ENSGT00940000163223.k	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000153772.B #7	ENSGT00940000158501.y #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165463.e	ENSGT00940000163223.k	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886	ENSGT00730000111617	ENSGT00940000163103
Tiger	MODERN SPECIES	473	GOLGA1 (ENSPTIG00000005468) #7	ENSPTIG00000004434 #8	ENSPTIG00000003358 #9	WDR38 (ENSPTIG00000001191) #10	OLFML2A (ENSPTIG00000000256) #11	NR6A1 (ENSPTIG00000019310) #12	NR5A1 (ENSPTIG00000018980) #13	ADGRD2 (ENSPTIG00000018740) #14	PSMB7 (ENSPTIG00000018529) #16	NEK6 (ENSPTIG00000018068) #15	LHX2 (ENSPTIG00000017789) #17	DENND1A (ENSPTIG00000017243) #18	CRB2 (ENSPTIG00000016442) #19	STRBP (ENSPTIG00000015831) #20	RABGAP1 (ENSPTIG00000015522) #21	ZBTB26 (ENSPTIG00000006045) #22	ZBTB6 (ENSPTIG00000006037) #23	RC3H2 (ENSPTIG00000014257) #24	PDCL (ENSPTIG00000014133) #25	OR1K1 (ENSPTIG00000006006)	OR5C1 (ENSPTIG00000006004) #26	ENSPTIG00000006001	ENSPTIG00000005987	ENSPTIG00000005983	OR1L1 (ENSPTIG00000005981)	OR1B1 (ENSPTIG00000005974)	ENSPTIG00000005970	ENSPTIG00000012515	OR1N2 (ENSPTIG00000012349)	OR1N1 (ENSPTIG00000012181)	OR1J4 (ENSPTIG00000005917)
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000153772.B #7	ENSGT00940000158501.y #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000165831	ENSGT00940000165463.e	ENSGT00940000163223.l	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886	ENSGT00730000111617
lion	MODERN SPECIES	13	GOLGA1 (ENSPLOG00000014524) #7	ENSPLOG00000014601 #8	RPL35 (ENSPLOG00000014664) #9	WDR38 (ENSPLOG00000014714) #10	OLFML2A (ENSPLOG00000014824) #11	NR6A1 (ENSPLOG00000014966) #12	NR5A1 (ENSPLOG00000015373) #13	ADGRD2 (ENSPLOG00000015510) #14	PSMB7 (ENSPLOG00000015690) #16	NEK6 (ENSPLOG00000015777) #15	LHX2 (ENSPLOG00000015889) #17	DENND1A (ENSPLOG00000015992) #18	CRB2 (ENSPLOG00000016222) #19	STRBP (ENSPLOG00000016383) #20	RABGAP1 (ENSPLOG00000016520) #21	ZBTB26 (ENSPLOG00000016607) #22	ZBTB6 (ENSPLOG00000016627) #23	RC3H2 (ENSPLOG00000016679) #24	PDCL (ENSPLOG00000016803) #25	OR1K1 (ENSPLOG00000016918)	OR5C1 (ENSPLOG00000016939) #26	ENSPLOG00000016983	ENSPLOG00000017253	OR1L1 (ENSPLOG00000017277)	OR1B1 (ENSPLOG00000017302)	ENSPLOG00000017317	OR1Q1 (ENSPLOG00000017333)	ENSPLOG00000017348	ENSPLOG00000017430	ENSPLOG00000017468	OR1J2 (ENSPLOG00000017591)
leopard	MODERN SPECIES	83	GOLGA1 (ENSPPRG00000012551) #7	ENSPPRG00000011416 #8	RPL35 (ENSPPRG00000009584) #9	WDR38 (ENSPPRG00000009371) #10	OLFML2A (ENSPPRG00000008528) #11	NR6A1 (ENSPPRG00000007044) #12	NR5A1 (ENSPPRG00000004846) #13	ADGRD2 (ENSPPRG00000003636) #14	PSMB7 (ENSPPRG00000002455) #16	NEK6 (ENSPPRG00000002216) #15	LHX2 (ENSPPRG00000024346) #17	DENND1A (ENSPPRG00000024434) #18	CRB2 (ENSPPRG00000013808) #19	STRBP (ENSPPRG00000013039) #20	RABGAP1 (ENSPPRG00000009610) #21	ZBTB26 (ENSPPRG00000017315) #22	ZBTB6 (ENSPPRG00000017301) #23	RC3H2 (ENSPPRG00000008698) #24	PDCL (ENSPPRG00000005705) #25	OR1K1 (ENSPPRG00000017241)	OR5C1 (ENSPPRG00000017227) #26
Cat	MODERN SPECIES	244	GOLGA1 (ENSFCAG00000003260) #7	ENSFCAG00000028753 #8	RPL35 (ENSFCAG00000030388) #9	WDR38 (ENSFCAG00000028099) #10	OLFML2A (ENSFCAG00000003257) #11	NR6A1 (ENSFCAG00000005507) #12	NR5A1 (ENSFCAG00000022552) #13	ADGRD2 (ENSFCAG00000052526) #14	PSMB7 (ENSFCAG00000014567) #16	NEK6 (ENSFCAG00000014563) #15	LHX2 (ENSFCAG00000006890) #17	DENND1A (ENSFCAG00000005043) #18	CRB2 (ENSFCAG00000005042) #19	ENSFCAG00000004095 #20	RABGAP1 (ENSFCAG00000004092) #21	ZBTB26 (ENSFCAG00000044625) #22	ZBTB6 (ENSFCAG00000039122) #23	RC3H2 (ENSFCAG00000007375) #24	PDCL (ENSFCAG00000026121) #25	OR1K1 (ENSFCAG00000007373)	OR5C1 (ENSFCAG00000007372) #26	ENSFCAG00000022283	ENSFCAG00000053101	ENSFCAG00000031274	ENSFCAG00000040999	ENSFCAG00000043029	ENSFCAG00000042922	ENSFCAG00000037877	ENSFCAG00000042143	ENSFCAG00000041871	OR1L1 (ENSFCAG00000009180)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000165463	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000163038.a.a	ENSGT00940000165018	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00930000151076	ENSGT00940000165929	ENSGT00940000163451	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027	ENSGT00940000163038.a.b	ENSGT00940000162849.B.d	ENSGT00940000162739	ENSGT00940000165018
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00930000151076	ENSGT00940000165929	ENSGT00940000162508	ENSGT00940000163995	ENSGT00940000163027	ENSGT00940000163038.a.b	ENSGT00940000162849.B.d	ENSGT00940000162739	ENSGT00940000165018	ENSGT00390000010743.b #27
Microbat	MODERN SPECIES	1110	ARPC5L (ENSMLUG00000009429) #8	RPL35 (ENSMLUG00000029323) #9	WDR38 (ENSMLUG00000024073) #10	OLFML2A (ENSMLUG00000017669) #11	NR6A1 (ENSMLUG00000014714) #12	NR5A1 (ENSMLUG00000005775) #13	PSMB7 (ENSMLUG00000007496) #16	NEK6 (ENSMLUG00000007482) #15	LHX2 (ENSMLUG00000016917) #17	DENND1A (ENSMLUG00000016076) #18	CRB2 (ENSMLUG00000024466) #19	ENSMLUG00000024699	GPR21 (ENSMLUG00000003878)	STRBP (ENSMLUG00000003882) #20	RABGAP1 (ENSMLUG00000003865) #21	ZBTB26 (ENSMLUG00000014009) #22	ZBTB6 (ENSMLUG00000014003) #23	RC3H2 (ENSMLUG00000013992) #24	PDCL (ENSMLUG00000011422) #25	RGS3 (ENSMLUG00000015873)
Megabat	MODERN SPECIES	766											DENND1A (ENSPVAG00000017623) #18	CRB2 (ENSPVAG00000017616) #19	STRBP (ENSPVAG00000017607) #20	GPR21 (ENSPVAG00000017605)	RABGAP1 (ENSPVAG00000017596) #21	ZBTB26 (ENSPVAG00000017595) #22	ZBTB6 (ENSPVAG00000017594) #23	RC3H2 (ENSPVAG00000017592) #24	PDCL (ENSPVAG00000017590) #25	OR5C1 (ENSPVAG00000017587) #26
Equus	ANCESTRAL SPECIES	30	ENSGT00940000158501 #8	ENSGT00390000016384.f.d #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456	ENSGT00940000165463.c	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00940000163649	ENSGT00940000163038.a.a	ENSGT00940000163938	ENSGT00940000161916	ENSGT00940000165463.d
Horse	MODERN SPECIES	17	ENSECAG00000045439 #9	OLFML2A (ENSECAG00000023908) #11	NR6A1 (ENSECAG00000021324) #12	NR5A1 (ENSECAG00000013752) #13	ADGRD2 (ENSECAG00000009351) #14	PSMB7 (ENSECAG00000023415) #16	NEK6 (ENSECAG00000009941) #15	LHX2 (ENSECAG00000009405) #17	ENSECAG00000055062	ENSECAG00000027494	DENND1A (ENSECAG00000022391) #18	CRB2 (ENSECAG00000021531) #19	STRBP (ENSECAG00000008465) #20	GPR21 (ENSECAG00000053059)	RABGAP1 (ENSECAG00000017729) #21	ZBTB26 (ENSECAG00000017397) #22	ZBTB6 (ENSECAG00000002222) #23	RC3H2 (ENSECAG00000022176) #24	PDCL (ENSECAG00000021253) #25	ENSECAG00000039194	ENSECAG00000042374	ENSECAG00000041269	OR1L6E (ENSECAG00000047569)	ENSECAG00000028129	ENSECAG00000005623	ENSECAG00000057932	OR1L8 (ENSECAG00000047023)	OR1J30 (ENSECAG00000050885)	OR1J43 (ENSECAG00000042275)	OR12K5 (ENSECAG00000004075)	OR1N19 (ENSECAG00000003721)
Donkey	MODERN SPECIES	1	ARPC5L (ENSEASG00005020744) #8	ENSEASG00005035844 #9	WDR38 (ENSEASG00005020747) #10	OLFML2A (ENSEASG00005020762) #11	NR6A1 (ENSEASG00005020778) #12	NR5A1 (ENSEASG00005020785) #13	ADGRD2 (ENSEASG00005020796) #14	PSMB7 (ENSEASG00005020802) #16	NEK6 (ENSEASG00005020808) #15	LHX2 (ENSEASG00005020812) #17	DENND1A (ENSEASG00005020820) #18	CRB2 (ENSEASG00005020846) #19	STRBP (ENSEASG00005020855) #20	RABGAP1 (ENSEASG00005020868) #21	GPR21 (ENSEASG00005023908)	ZBTB26 (ENSEASG00005020877) #22	ZBTB6 (ENSEASG00005033263) #23	RC3H2 (ENSEASG00005020897) #24	PDCL (ENSEASG00005027986) #25	OR1K1 (ENSEASG00005020997)	OR5C1 (ENSEASG00005030075) #26	ENSEASG00005021005	ENSEASG00005021051	OR1L3 (ENSEASG00005021012)	OR1L1 (ENSEASG00005021014)	OR1B1 (ENSEASG00005021015)	OR1Q1 (ENSEASG00005021018)	ENSEASG00005025654	ENSEASG00005037952	ENSEASG00005021027	ENSEASG00005021032
Atlantogenata	ANCESTRAL SPECIES	12	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT00940000163456	ENSGT00940000163938	ENSGT00940000165831	ENSGT00940000161916	ENSGT00940000163223	ENSGT00940000164453	ENSGT00900000141254	ENSGT00930000151076	ENSGT00940000163649	ENSGT00940000165929	ENSGT00940000164886
Elephant	MODERN SPECIES	472	GOLGA1 (ENSLAFG00000010035) #7	ARPC5L (ENSLAFG00000010034) #8	RPL35 (ENSLAFG00000010031) #9	WDR38 (ENSLAFG00000010023) #10	OLFML2A (ENSLAFG00000013500) #11	NR6A1 (ENSLAFG00000011676) #12	NR5A1 (ENSLAFG00000018557) #13	ENSLAFG00000018553 #14	PSMB7 (ENSLAFG00000009265) #16	NEK6 (ENSLAFG00000021394) #15	LHX2 (ENSLAFG00000007827) #17	DENND1A (ENSLAFG00000011628) #18	CRB2 (ENSLAFG00000000156) #19	STRBP (ENSLAFG00000012408) #20	RABGAP1 (ENSLAFG00000012397) #21	ZBTB26 (ENSLAFG00000012394) #22	ZBTB6 (ENSLAFG00000014046) #23	RC3H2 (ENSLAFG00000003521) #24	PDCL (ENSLAFG00000011935) #25	OR1K1 (ENSLAFG00000004845)	ENSLAFG00000032586	ENSLAFG00000004410	ENSLAFG00000026810	ENSLAFG00000026441	ENSLAFG00000032551	ENSLAFG00000029058	ENSLAFG00000032331	ENSLAFG00000030694	ENSLAFG00000026244	OR1L1 (ENSLAFG00000026613)	ENSLAFG00000032493
Hyrax	MODERN SPECIES	2697																ZBTB26 (ENSPCAG00000010332) #22	RC3H2 (ENSPCAG00000010154) #24	PDCL (ENSPCAG00000010094) #25
Tenrec	MODERN SPECIES	14393																ZBTB26 (ENSETEG00000009868) #22	ZBTB6 (ENSETEG00000009867) #23
Xenarthra	ANCESTRAL SPECIES	90	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00390000016384.f #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT01100000263572.a.a.b.a.b #26
Armadillo	MODERN SPECIES	2027	OLFML2A (ENSDNOG00000040474) #11	ENSDNOG00000033680	NR6A1 (ENSDNOG00000017832) #12	ENSDNOG00000032252	NR5A1 (ENSDNOG00000040922) #13	ADGRD2 (ENSDNOG00000015410) #14	PSMB7 (ENSDNOG00000015332) #16	NEK6 (ENSDNOG00000015320) #15	LHX2 (ENSDNOG00000000465) #17	ENSDNOG00000045998	DENND1A (ENSDNOG00000034926) #18	CRB2 (ENSDNOG00000038587) #19	STRBP (ENSDNOG00000043330) #20	RABGAP1 (ENSDNOG00000013366) #21	ENSDNOG00000037259	ZBTB26 (ENSDNOG00000045813) #22	ZBTB6 (ENSDNOG00000014591) #23	RC3H2 (ENSDNOG00000014557) #24	ENSDNOG00000043976	PDCL (ENSDNOG00000044206) #25	ENSDNOG00000003471 #26
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000158501 #8	ENSGT00390000016384 #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.q	ENSGT00940000163938	ENSGT00940000161916	ENSGT00930000151076.i	ENSGT00940000163649	ENSGT00940000162508.j	ENSGT00940000162508.i	ENSGT00940000163103	ENSGT00730000111617	ENSGT00940000164886
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00390000016384 #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540.a #17	ENSGT00940000158540.b #17	ENSGT00940000156261.d #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.q	ENSGT00940000163938	ENSGT00940000161916	ENSGT00930000151076.i	ENSGT00940000163649	ENSGT00940000162508.j	ENSGT00940000162508.i	ENSGT00940000163103	ENSGT00940000164886	ENSGT00900000141254.d
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000153772.B #7	ENSGT00940000158501 #8	ENSGT00390000016384 #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540.a #17	ENSGT00940000158540.b #17	ENSGT00940000156261.d #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.r	ENSGT00940000163456.q	ENSGT00940000163938	ENSGT00940000161916	ENSGT00930000151076.i	ENSGT00940000163103	ENSGT00940000164886	ENSGT00900000141254.d	ENSGT00900000141254.c	ENSGT00930000151076.j
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00390000009566	ENSGT00940000153772.B #7	ENSGT00940000158501.g #8	ENSGT00390000016384 #9	ENSGT00940000162358 #10	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540.a #17	ENSGT00940000156261.d #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00940000153683.b	ENSGT01100000263572.a.a.b.a.b #26	ENSGT00940000163456.r	ENSGT00940000161916	ENSGT00930000151076.i	ENSGT00940000163103	ENSGT00940000164886	ENSGT00900000141254.d	ENSGT00900000141254.c	ENSGT00930000151076.j	ENSGT00390000010743.b #27	ENSGT00390000005084 #28
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1024	ENSVURG00010017537	ENSVURG00010017517 #7	ENSVURG00010017501 #8	ENSVURG00010017496 #9	ENSVURG00010017466 #10	ENSVURG00010017449 #11	ENSVURG00010017416 #12	ENSVURG00010017409 #13	ENSVURG00010017394 #16	ENSVURG00010017384 #15	ENSVURG00010017362 #17	ENSVURG00010017253 #18	ENSVURG00010017196 #19	ENSVURG00010017151 #20	ENSVURG00010017110 #21	ENSVURG00010017097 #22	ENSVURG00010017094 #23	ENSVURG00010017076 #24	ENSVURG00010017064 #25	ENSVURG00010017055	ENSVURG00010017046 #26	ENSVURG00010017041	ENSVURG00010017036	ENSVURG00010017025	ENSVURG00010016971	ENSVURG00010016951	ENSVURG00010016949	ENSVURG00010016945	ENSVURG00010016939	ENSVURG00010016864 #27	ENSVURG00010016827 #27
Common wonbat	MODERN SPECIES	1024	ENSVURG00010009604	ENSVURG00010009564 #7	ENSVURG00010009559 #8	ENSVURG00010009550 #9	ENSVURG00010009523 #10	ENSVURG00010009499 #11	ENSVURG00010009439 #12	ENSVURG00010009361 #13	ENSVURG00010009332 #16	ENSVURG00010009314 #15	ENSVURG00010009299 #17	ENSVURG00010009229 #18	ENSVURG00010009185 #19	ENSVURG00010009173 #20	ENSVURG00010009113 #21	ENSVURG00010009091 #22	ENSVURG00010009089 #23	ENSVURG00010009073 #24	ENSVURG00010009068 #25	ENSVURG00010009065	ENSVURG00010009060 #26	ENSVURG00010009055	ENSVURG00010009035	ENSVURG00010009021	ENSVURG00010008966	ENSVURG00010008940	ENSVURG00010008930	ENSVURG00010008920	ENSVURG00010008915	ENSVURG00010008587 #27	ENSVURG00010008556 #27
koala	MODERN SPECIES	177	GOLGA1 (ENSPCIG00000028441) #7	ENSPCIG00000020607 #8	ENSPCIG00000020603 #9	ENSPCIG00000020599	OLFML2A (ENSPCIG00000020590) #11	NR6A1 (ENSPCIG00000020572) #12	NR5A1 (ENSPCIG00000020567) #13	PSMB7 (ENSPCIG00000020558) #16	NEK6 (ENSPCIG00000020553) #15	ENSPCIG00000020547	LHX2 (ENSPCIG00000010082) #17	DENND1A (ENSPCIG00000035239) #18	ENSPCIG00000026360 #19	STRBP (ENSPCIG00000025588) #20	RABGAP1 (ENSPCIG00000025568) #21	ZBTB26 (ENSPCIG00000025565) #22	ZBTB6 (ENSPCIG00000025564) #23	RC3H2 (ENSPCIG00000025559) #24	PDCL (ENSPCIG00000015845) #25	ENSPCIG00000034510 #26	ENSPCIG00000008140	ENSPCIG00000023414	ENSPCIG00000025547	PTGS1 (ENSPCIG00000025538) #27	MRRF (ENSPCIG00000025530) #28	RBM18 (ENSPCIG00000025526) #29	LHX6 (ENSPCIG00000025520) #30	MORN5 (ENSPCIG00000025518) #31	NDUFA8 (ENSPCIG00000025514) #32	ENSPCIG00000034818	TTLL11 (ENSPCIG00000025502) #33
Wallaby	MODERN SPECIES	13004																ZBTB26 (ENSMEUG00000015636) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000004224 #10	OLFML2A (ENSSHAG00000028473) #11	NR6A1 (ENSSHAG00000030299) #12	NR5A1 (ENSSHAG00000025642) #13	ENSSHAG00000023389 #14	PSMB7 (ENSSHAG00000016059) #16	NEK6 (ENSSHAG00000015827) #15	ENSSHAG00000026980	LHX2 (ENSSHAG00000014985) #17	ENSSHAG00000029112 #18	ENSSHAG00000027671 #18	ENSSHAG00000011663	STRBP (ENSSHAG00000009918) #20	GPR21 (ENSSHAG00000026905)	RABGAP1 (ENSSHAG00000008396) #21	ZBTB26 (ENSSHAG00000008190) #22	ZBTB6 (ENSSHAG00000031740) #23	PDCL (ENSSHAG00000027890) #25	RC3H2 (ENSSHAG00000007498) #24	OR1K1 (ENSSHAG00000006894)	ENSSHAG00000006694 #26	ENSSHAG00000006496	ENSSHAG00000020458	ENSSHAG00000021535	ENSSHAG00000004245	ENSSHAG00000003216	ENSSHAG00000030496	ENSSHAG00000000695	ENSSHAG00000003303	ENSSHAG00000031660	ENSSHAG00000023842
Opossum	MODERN SPECIES		GOLGA1 (ENSMODG00000019758) #7	ARPC5L (ENSMODG00000019755) #8	RPL35 (ENSMODG00000019753) #9	ENSMODG00000019752 #10	OLFML2A (ENSMODG00000019750) #11	NR6A1 (ENSMODG00000019748) #12	NR5A1 (ENSMODG00000019746) #13	ENSMODG00000019744 #14	PSMB7 (ENSMODG00000019742) #16	NEK6 (ENSMODG00000019741) #15	LHX2 (ENSMODG00000019739) #17	DENND1A (ENSMODG00000019737) #18	ENSMODG00000019734 #19	STRBP (ENSMODG00000019732) #20	RABGAP1 (ENSMODG00000019729) #21	ZBTB26 (ENSMODG00000023552) #22	ZBTB6 (ENSMODG00000023551) #23	RC3H2 (ENSMODG00000019725) #24	PDCL (ENSMODG00000048390) #25	OR1K1 (ENSMODG00000019721)	ENSMODG00000019718 #26	ENSMODG00000019715	ENSMODG00000019717	ENSMODG00000019714	ENSMODG00000044320	ENSMODG00000040283	ENSMODG00000023548	ENSMODG00000037549	ENSMODG00000049859	ENSMODG00000019705	ENSMODG00000019703
Platypus	MODERN SPECIES	15	SCAI (ENSOANG00000013296)	GOLGA1 (ENSOANG00000013299) #7	ARPC5L (ENSOANG00000038645) #8	RPL35 (ENSOANG00000036932) #9	OLFML2A (ENSOANG00000013302) #11	NR6A1 (ENSOANG00000013303) #12	NR5A1 (ENSOANG00000012920) #13	ENSOANG00000012921 #14	PSMB7 (ENSOANG00000048360) #16	NEK6 (ENSOANG00000000382) #15	LHX2 (ENSOANG00000043102) #17	DENND1A (ENSOANG00000045046) #18	ENSOANG00000020908 #19	STRBP (ENSOANG00000011875) #20	RABGAP1 (ENSOANG00000044188) #21	ZBTB26 (ENSOANG00000051183) #22	ZBTB6 (ENSOANG00000040131) #23	RC3H2 (ENSOANG00000008194) #24	PDCL (ENSOANG00000045648) #25	PTGS1 (ENSOANG00000008197) #27	ENSOANG00000039361	ENSOANG00000008199 #28	RBM18 (ENSOANG00000039349) #29	LHX6 (ENSOANG00000046061) #30	ENSOANG00000004699 #31	NDUFA8 (ENSOANG00000044958) #32	ENSOANG00000043821	TTLL11 (ENSOANG00000004693) #33	DAB2IP (ENSOANG00000011959) #34	ENSOANG00000043390	STOM (ENSOANG00000030257) #36
Sauria	ANCESTRAL SPECIES	33	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B	ENSGT01030000234614.B.a.a.a #36
Archelosauria	ANCESTRAL SPECIES	32	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Archosauria	ANCESTRAL SPECIES	25	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a #36	ENSGT00940000155591 #37
Aves	ANCESTRAL SPECIES	21	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Neognathae	ANCESTRAL SPECIES	20	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.b #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a #36
Anatidae	ANCESTRAL SPECIES	13	ENSGT00940000158501 #8	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.b #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a #36	ENSGT00940000155591 #37	ENSGT00940000155178
Duck	MODERN SPECIES	8	HSPA5 (ENSAPLG00000003208)	RABEPK (ENSAPLG00000003608)	PPP6C (ENSAPLG00000031249)	GOLGA1 (ENSAPLG00000003658) #7	SCAI (ENSAPLG00000003982)	NR6A1 (ENSAPLG00000026220) #12	NR5A1 (ENSAPLG00000018502) #13	ENSAPLG00000004790	PSMB7 (ENSAPLG00000004904) #16	NEK6 (ENSAPLG00000005036) #15	LHX2 (ENSAPLG00000005909) #17	DENND1A (ENSAPLG00000005294) #18	CRB2 (ENSAPLG00000006162) #19	STRBP (ENSAPLG00000006350) #20	RABGAP1 (ENSAPLG00000006937) #21	ZBTB26 (ENSAPLG00000001864) #22	ZBTB6 (ENSAPLG00000013918) #23	RC3H2 (ENSAPLG00000013920) #24	PDCL (ENSAPLG00000014180) #25	PTGS1 (ENSAPLG00000014313) #27	MRRF (ENSAPLG00000014749) #28	TTLL11 (ENSAPLG00000015039) #33	DAB2IP (ENSAPLG00000015053) #34	ENSAPLG00000029715	ENSAPLG00000030789	STOM (ENSAPLG00000006085) #36	GSN (ENSAPLG00000005342) #37	RAB14 (ENSAPLG00000027802)	CNTRL (ENSAPLG00000004711)	C5 (ENSAPLG00000007514)	TRAF1 (ENSAPLG00000022423)
Pink-footed goose	MODERN SPECIES	8	GOLGA1 (ENSABRG00000022369) #7	SCAI (ENSABRG00000022367)	RPL35 (ENSABRG00000022365) #9	OLFML2A (ENSABRG00000022363) #11	NR6A1 (ENSABRG00000022362) #12	NR5A1 (ENSABRG00000022360) #13	ADGRD2 (ENSABRG00000022355) #14	PSMB7 (ENSABRG00000022352) #16	ENSABRG00000022351	NEK6 (ENSABRG00000022347) #15	LHX2 (ENSABRG00000022343) #17	DENND1A (ENSABRG00000022342) #18	CRB2 (ENSABRG00000022341) #19	STRBP (ENSABRG00000022340) #20	RABGAP1 (ENSABRG00000022338) #21	ZBTB26 (ENSABRG00000022337) #22	ZBTB6 (ENSABRG00000022336) #23	RC3H2 (ENSABRG00000022334) #24	PDCL (ENSABRG00000022332) #25	PTGS1 (ENSABRG00000022330) #27	MRRF (ENSABRG00000022329) #28	RBM18 (ENSABRG00000022328) #29	LHX6 (ENSABRG00000022325) #30	ENSABRG00000022321	NDUFA8 (ENSABRG00000022320) #32	MORN5 (ENSABRG00000022319) #31	TTLL11 (ENSABRG00000022317) #33	DAB2IP (ENSABRG00000022293) #34	ENSABRG00000022276	STOM (ENSABRG00000022275) #36	GSN (ENSABRG00000022203) #37
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.b #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689.y.a #33	ENSGT00940000155853 #34	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a #36
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.b #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689.y.a #33	ENSGT00940000156689.z #33	ENSGT00940000155853 #34	ENSGT00390000000223
Turkey	MODERN SPECIES	10	ARPC5L (ENSMGAG00000008479) #8	ENSMGAG00000008417 #7	SCAI (ENSMGAG00000008380)	RPL35 (ENSMGAG00000008366) #9	OLFML2A (ENSMGAG00000008339) #11	NR6A1 (ENSMGAG00000019523) #12	NR5A1 (ENSMGAG00000008342) #13	ADGRD2 (ENSMGAG00000008260) #14	PSMB7 (ENSMGAG00000008256) #16	NEK6 (ENSMGAG00000008220) #15	LHX2 (ENSMGAG00000008202) #17	DENND1A (ENSMGAG00000008024) #18	CRB2 (ENSMGAG00000008169) #19	STRBP (ENSMGAG00000008101) #20	RABGAP1 (ENSMGAG00000008049) #21	ZBTB26 (ENSMGAG00000019919) #22	ZBTB6 (ENSMGAG00000008047) #23	RC3H2 (ENSMGAG00000007984) #24	PDCL (ENSMGAG00000007971) #25	PTGS1 (ENSMGAG00000007938) #27	ENSMGAG00000007925	MRRF (ENSMGAG00000022984) #28	RBM18 (ENSMGAG00000016888) #29	ENSMGAG00000018287	ENSMGAG00000020476	NDUFA8 (ENSMGAG00000016547) #32	ENSMGAG00000016757	ENSMGAG00000017201 #33	ENSMGAG00000018498 #33	DAB2IP (ENSMGAG00000007886) #34	STOM (ENSMGAG00000007860) #36
Chicken	MODERN SPECIES	8	GOLGA1 (ENSGALG00010028104) #7	SCAI (ENSGALG00010027752)	RPL35 (ENSGALG00010027733) #9	OLFML2A (ENSGALG00010027731) #11	NR6A1 (ENSGALG00010028917) #12	NR5A1 (ENSGALG00010028916) #13	ADGRD2 (ENSGALG00010028915) #14	PSMB7 (ENSGALG00010028440) #16	NEK6 (ENSGALG00010029146) #15	LHX2 (ENSGALG00010028411) #17	DENND1A (ENSGALG00010028346) #18	CRB2 (ENSGALG00010028326) #19	STRBP (ENSGALG00010028322) #20	GPR21 (ENSGALG00010028426)	RABGAP1 (ENSGALG00010028428) #21	ZBTB26 (ENSGALG00010028394) #22	RC3H2 (ENSGALG00010029145) #24	PDCL (ENSGALG00010028377) #25	PTGS1 (ENSGALG00010028372) #27	MRRFP1 (ENSGALG00010028366) #28	RBM18 (ENSGALG00010028355) #29	LHX6 (ENSGALG00010027906) #30	MORN5 (ENSGALG00010027904) #31	NDUFA8 (ENSGALG00010027903) #32	ENSGALG00010027730	TTLL11 (ENSGALG00010027724) #33	DAB2IP (ENSGALG00010027720) #34	ENSGALG00010027716	STOM (ENSGALG00010027712) #36	GSN (ENSGALG00010027706) #37	RAB14 (ENSGALG00010027693)
Japanese quail	MODERN SPECIES	8	GOLGA1 (ENSCJPG00005010935) #7	SCAI (ENSCJPG00005010894)	RPL35 (ENSCJPG00005010891) #9	OLFML2A (ENSCJPG00005010890) #11	NR6A1 (ENSCJPG00005010887) #12	ENSCJPG00005010886	NR5A1 (ENSCJPG00005010885) #13	ADGRD2 (ENSCJPG00005010881) #14	PSMB7 (ENSCJPG00005010878) #16	NEK6 (ENSCJPG00005010876) #15	LHX2 (ENSCJPG00005010873) #17	DENND1A (ENSCJPG00005010867) #18	CRB2 (ENSCJPG00005010866) #19	STRBP (ENSCJPG00005010865) #20	RABGAP1 (ENSCJPG00005010864) #21	ZBTB26 (ENSCJPG00005010863) #22	ZBTB6 (ENSCJPG00005010862) #23	RC3H2 (ENSCJPG00005010860) #24	ENSCJPG00005010859	PDCL (ENSCJPG00005010858) #25	PTGS1 (ENSCJPG00005010857) #27	MRRF (ENSCJPG00005010856) #28	ENSCJPG00005010855	RBM18 (ENSCJPG00005010854) #29	LHX6 (ENSCJPG00005010852) #30	MORN5 (ENSCJPG00005010851) #31	NDUFA8 (ENSCJPG00005010850) #32	ENSCJPG00005010849	TTLL11 (ENSCJPG00005010848) #33	DAB2IP (ENSCJPG00005010172) #34	ENSCJPG00005010171
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Passeriformes	ANCESTRAL SPECIES	20	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Great tit	MODERN SPECIES	7	ARPC5L (ENSPMJG00000019166) #8	GOLGA1 (ENSPMJG00000019167) #7	SCAI (ENSPMJG00000019168)	RPL35 (ENSPMJG00000019169) #9	OLFML2A (ENSPMJG00000019170) #11	NR6A1 (ENSPMJG00000019171) #12	NR5A1 (ENSPMJG00000019173) #13	ADGRD2 (ENSPMJG00000019174) #14	PSMB7 (ENSPMJG00000019175) #16	NEK6 (ENSPMJG00000019176) #15	LHX2 (ENSPMJG00000019177) #17	DENND1A (ENSPMJG00000000071) #18	CRB2 (ENSPMJG00000000171) #19	STRBP (ENSPMJG00000000230) #20	RABGAP1 (ENSPMJG00000000285) #21	ZBTB26 (ENSPMJG00000000339) #22	ZBTB6 (ENSPMJG00000000344) #23	RC3H2 (ENSPMJG00000000346) #24	PTGS1 (ENSPMJG00000000401) #27	MRRF (ENSPMJG00000000410) #28	RBM18 (ENSPMJG00000000417) #29	LHX6 (ENSPMJG00000000419) #30	MORN5 (ENSPMJG00000000430) #31	NDUFA8 (ENSPMJG00000000445) #32	ENSPMJG00000000458	TTLL11 (ENSPMJG00000000486) #33	DAB2IP (ENSPMJG00000000512) #34	STOM (ENSPMJG00000000645) #36	ENSPMJG00000000649	GSN (ENSPMJG00000000652) #37	RAB14 (ENSPMJG00000000693)
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00390000000223
Zebra finch	MODERN SPECIES	8	ARPC5L (ENSTGUG00000026340) #8	GOLGA1 (ENSTGUG00000007238) #7	SCAI (ENSTGUG00000007202)	RPL35 (ENSTGUG00000007196) #9	OLFML2A (ENSTGUG00000007193) #11	NR6A1 (ENSTGUG00000020793) #12	NR5A1 (ENSTGUG00000007170) #13	ADGRD2 (ENSTGUG00000007153) #14	PSMB7 (ENSTGUG00000007119) #16	NEK6 (ENSTGUG00000007095) #15	LHX2 (ENSTGUG00000028408) #17	DENND1A (ENSTGUG00000007024) #18	CRB2 (ENSTGUG00000007009) #19	STRBP (ENSTGUG00000006984) #20	GPR21 (ENSTGUG00000021427)	ZBTB26 (ENSTGUG00000019106) #22	RABGAP1 (ENSTGUG00000006934) #21	RC3H2 (ENSTGUG00000006889) #24	PDCL (ENSTGUG00000006880) #25	PTGS1 (ENSTGUG00000006822) #27	ENSTGUG00000006813	MRRF (ENSTGUG00000022064) #28	RBM18 (ENSTGUG00000029059) #29	LHX6 (ENSTGUG00000006782) #30	MORN5 (ENSTGUG00000006779) #31	ENSTGUG00000019874	ENSTGUG00000027059	TTLL11 (ENSTGUG00000006765) #33	DAB2IP (ENSTGUG00000006752) #34	ENSTGUG00000025782	STOM (ENSTGUG00000006736) #36
Common canary	MODERN SPECIES	22	ARPC5L (ENSSCAG00000016122) #8	GOLGA1 (ENSSCAG00000016125) #7	SCAI (ENSSCAG00000016132)	RPL35 (ENSSCAG00000016137) #9	OLFML2A (ENSSCAG00000016141) #11	NR6A1 (ENSSCAG00000016146) #12	NR5A1 (ENSSCAG00000016149) #13	ADGRD2 (ENSSCAG00000016150) #14	PSMB7 (ENSSCAG00000016152) #16	NEK6 (ENSSCAG00000016156) #15	LHX2 (ENSSCAG00000016158) #17	DENND1A (ENSSCAG00000016165) #18	CRB2 (ENSSCAG00000016174) #19	STRBP (ENSSCAG00000016175) #20	RABGAP1 (ENSSCAG00000016179) #21	ZBTB26 (ENSSCAG00000016184) #22	ZBTB6 (ENSSCAG00000016187) #23	RC3H2 (ENSSCAG00000016190) #24	PDCL (ENSSCAG00000016197) #25	PTGS1 (ENSSCAG00000016199) #27	MRRF (ENSSCAG00000016205) #28	RBM18 (ENSSCAG00000016209) #29	LHX6 (ENSSCAG00000016210) #30	MORN5 (ENSSCAG00000000147) #31	NDUFA8 (ENSSCAG00000000164) #32	ENSSCAG00000000172	ENSSCAG00000000192	ENSSCAG00000000207 #33	ENSSCAG00000000218 #33	DAB2IP (ENSSCAG00000000384) #34	STOM (ENSSCAG00000000758) #36
Medium ground finch	MODERN SPECIES	32	GOLGA1 (ENSGFOG00000002568) #7	SCAI (ENSGFOG00000002633)	RPL35 (ENSGFOG00000003076) #9	OLFML2A (ENSGFOG00000003090) #11	NR5A1 (ENSGFOG00000003120) #13	NR6A1 (ENSGFOG00000003136) #12	ENSGFOG00000003161	ADGRD2 (ENSGFOG00000003184) #14	PSMB7 (ENSGFOG00000003237) #16	NEK6 (ENSGFOG00000003257) #15	LHX2 (ENSGFOG00000003318) #17	DENND1A (ENSGFOG00000003357) #18	CRB2 (ENSGFOG00000003494) #19	STRBP (ENSGFOG00000003717) #20	RABGAP1 (ENSGFOG00000003746) #21	ZBTB26 (ENSGFOG00000003774) #22	ZBTB6 (ENSGFOG00000003785) #23	RC3H2 (ENSGFOG00000003800) #24	PDCL (ENSGFOG00000003838) #25	PTGS1 (ENSGFOG00000003848) #27	MRRF (ENSGFOG00000003864) #28	RBM18 (ENSGFOG00000003875) #29	LHX6 (ENSGFOG00000003881) #30	ENSGFOG00000003893	MORN5 (ENSGFOG00000003910) #31	NDUFA8 (ENSGFOG00000003920) #32	ENSGFOG00000003930	TTLL11 (ENSGFOG00000003947) #33	DAB2IP (ENSGFOG00000004044) #34	STOM (ENSGFOG00000004923) #36	ENSGFOG00000004933
Flycatcher	MODERN SPECIES	7	ARPC5L (ENSFALG00000002171) #8	ENSFALG00000002170 #7	SCAI (ENSFALG00000002169)	RPL35 (ENSFALG00000002168) #9	OLFML2A (ENSFALG00000002145) #11	NR6A1 (ENSFALG00000002133) #12	NR5A1 (ENSFALG00000002130) #13	ADGRD2 (ENSFALG00000002127) #14	PSMB7 (ENSFALG00000002108) #16	NEK6 (ENSFALG00000002081) #15	LHX2 (ENSFALG00000023364) #17	DENND1A (ENSFALG00000002050) #18	CRB2 (ENSFALG00000002040) #19	STRBP (ENSFALG00000002031) #20	RABGAP1 (ENSFALG00000002016) #21	ZBTB26 (ENSFALG00000014341) #22	ZBTB6 (ENSFALG00000002014) #23	RC3H2 (ENSFALG00000002011) #24	PDCL (ENSFALG00000002008) #25	PTGS1 (ENSFALG00000001991) #27	MRRF (ENSFALG00000027533) #28	RBM18 (ENSFALG00000023150) #29	LHX6 (ENSFALG00000029064) #30	MORN5 (ENSFALG00000001935) #31	ENSFALG00000001915	NDUFA8 (ENSFALG00000024482) #32	TTLL11 (ENSFALG00000001914) #33	DAB2IP (ENSFALG00000001901) #34	ENSFALG00000025691	STOM (ENSFALG00000001896) #36	GSN (ENSFALG00000001837) #37
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT01100000264691	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00940000155591 #37
Kakapo	MODERN SPECIES	9	SCAI (ENSSHBG00005013683)	RPL35 (ENSSHBG00005013653) #9	OLFML2A (ENSSHBG00005013635) #11	NR6A1 (ENSSHBG00005013599) #12	NR5A1 (ENSSHBG00005013567) #13	ADGRD2 (ENSSHBG00005013538) #14	PSMB7 (ENSSHBG00005013508) #16	NEK6 (ENSSHBG00005013489) #15	LHX2 (ENSSHBG00005013472) #17	ENSSHBG00005013441 #18	ENSSHBG00005013419 #18	CRB2 (ENSSHBG00005013392) #19	STRBP (ENSSHBG00005013360) #20	GPR21 (ENSSHBG00005013336)	RABGAP1 (ENSSHBG00005013325) #21	ZBTB26 (ENSSHBG00005013312) #22	ZBTB6 (ENSSHBG00005013304) #23	RC3H2 (ENSSHBG00005013282) #24	PDCL (ENSSHBG00005013266) #25	PTGS1 (ENSSHBG00005013245) #27	MRRF (ENSSHBG00005013229) #28	RBM18 (ENSSHBG00005013223) #29	LHX6 (ENSSHBG00005013209) #30	MORN5 (ENSSHBG00005013202) #31	NDUFA8 (ENSSHBG00005013195) #32	ENSSHBG00005013187	TTLL11 (ENSSHBG00005013177) #33	DAB2IP (ENSSHBG00005012805) #34	STOM (ENSSHBG00005012660) #36	GSN (ENSSHBG00005012614) #37	RAB14 (ENSSHBG00005000831)
Golden eagle	MODERN SPECIES	16	ARPC5L (ENSACCG00020016251) #8	GOLGA1 (ENSACCG00020015908) #7	SCAI (ENSACCG00020015805)	RPL35 (ENSACCG00020015720) #9	OLFML2A (ENSACCG00020015705) #11	NR6A1 (ENSACCG00020015466) #12	NR5A1 (ENSACCG00020015352) #13	ADGRD2 (ENSACCG00020015309) #14	PSMB7 (ENSACCG00020015286) #16	NEK6 (ENSACCG00020015262) #15	LHX2 (ENSACCG00020015247) #17	DENND1A (ENSACCG00020015213) #18	CRB2 (ENSACCG00020015097) #19	STRBP (ENSACCG00020014859) #20	RABGAP1 (ENSACCG00020014692) #21	ZBTB26 (ENSACCG00020014635) #22	ZBTB6 (ENSACCG00020014617) #23	RC3H2 (ENSACCG00020014591) #24	PDCL (ENSACCG00020014568) #25	PTGS1 (ENSACCG00020014538) #27	ENSACCG00020014513	MRRF (ENSACCG00020014489) #28	RBM18 (ENSACCG00020014466) #29	LHX6 (ENSACCG00020014440) #30	MORN5 (ENSACCG00020014413) #31	NDUFA8 (ENSACCG00020014392) #32	ENSACCG00020014359	TTLL11 (ENSACCG00020014314) #33	DAB2IP (ENSACCG00020014274) #34	STOM (ENSACCG00020014222) #36	GSN (ENSACCG00020014161) #37
African ostrich	MODERN SPECIES	111															ENSSCUG00000000416 #21	ZBTB26 (ENSSCUG00000000425) #22	ZBTB6 (ENSSCUG00000000428) #23	RC3H2 (ENSSCUG00000000436) #24	PTGS1 (ENSSCUG00000000456) #27	MRRF (ENSSCUG00000000458) #28	RBM18 (ENSSCUG00000000461) #29	ENSSCUG00000000465
Australian saltwater crocodile	MODERN SPECIES	44	GOLGA1 (ENSCPRG00005010842) #7	SCAI (ENSCPRG00005010819)	RPL35 (ENSCPRG00005010810) #9	ENSCPRG00005010804	OLFML2A (ENSCPRG00005010769) #11	NR6A1 (ENSCPRG00005010754) #12	NR5A1 (ENSCPRG00005010753) #13	ADGRD2 (ENSCPRG00005010747) #14	PSMB7 (ENSCPRG00005010746) #16	NEK6 (ENSCPRG00005010741) #15	LHX2 (ENSCPRG00005010736) #17	DENND1A (ENSCPRG00005010705) #18	CRB2 (ENSCPRG00005010693) #19	STRBP (ENSCPRG00005010682) #20	RABGAP1 (ENSCPRG00005010670) #21	ZBTB26 (ENSCPRG00005010664) #22	ZBTB6 (ENSCPRG00005010641) #23	RC3H2 (ENSCPRG00005010607) #24	PDCL (ENSCPRG00005010586) #25	PTGS1 (ENSCPRG00005010557) #27	MRRF (ENSCPRG00005010554) #28	RBM18 (ENSCPRG00005010550) #29	LHX6 (ENSCPRG00005010540) #30	MORN5 (ENSCPRG00005010533) #31	NDUFA8 (ENSCPRG00005010529) #32	ENSCPRG00005010514	TTLL11 (ENSCPRG00005010496) #33	DAB2IP (ENSCPRG00005010455) #34	ENSCPRG00005010443	STOM (ENSCPRG00005010438) #36	GSN (ENSCPRG00005010213) #37
Cryptodira	ANCESTRAL SPECIES	33	ENSGT00940000158501 #8	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689.cb #33	ENSGT00940000164999	ENSGT00940000156689.bb #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT00940000158501 #8	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689.cb #33	ENSGT00940000164999	ENSGT00940000156689.bb #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36
Emydidae	ANCESTRAL SPECIES	29	ENSGT00940000158501 #8	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689.bb #33	ENSGT00940000155853 #34	ENSGT00990000213569	ENSGT01030000234614.B.a.a.a #36	ENSGT00940000155591 #37
Three-toed box turtle	MODERN SPECIES	113	ARPC5L (ENSTMTG00000016343) #8	GOLGA1 (ENSTMTG00000016257) #7	SCAI (ENSTMTG00000016173)	RPL35 (ENSTMTG00000016153) #9	OLFML2A (ENSTMTG00000016138) #11	NR6A1 (ENSTMTG00000016050) #12	NR5A1 (ENSTMTG00000016018) #13	ADGRD2 (ENSTMTG00000015979) #14	PSMB7 (ENSTMTG00000015950) #16	NEK6 (ENSTMTG00000015931) #15	LHX2 (ENSTMTG00000015920) #17	DENND1A (ENSTMTG00000015853) #18	CRB2 (ENSTMTG00000015799) #19	STRBP (ENSTMTG00000015690) #20	RABGAP1 (ENSTMTG00000015634) #21	ZBTB26 (ENSTMTG00000015625) #22	ZBTB6 (ENSTMTG00000015606) #23	RC3H2 (ENSTMTG00000015560) #24	PDCL (ENSTMTG00000015546) #25	PTGS1 (ENSTMTG00000015538) #27	MRRF (ENSTMTG00000015521) #28	RBM18 (ENSTMTG00000015513) #29	LHX6 (ENSTMTG00000015494) #30	MORN5 (ENSTMTG00000015471) #31	NDUFA8 (ENSTMTG00000015460) #32	ENSTMTG00000015447	ENSTMTG00000015437 #33	ENSTMTG00000015418 #33	DAB2IP (ENSTMTG00000015359) #34	ENSTMTG00000015342	STOM (ENSTMTG00000015327) #36
painted turtle	MODERN SPECIES	720	RMDN1 (ENSCPBG00000009563)	WWP1 (ENSCPBG00000009574)	ATP6V0D2 (ENSCPBG00000009584)	CA2 (ENSCPBG00000009602)	CA3 (ENSCPBG00000009607)	CA1 (ENSCPBG00000009610)	CA13 (ENSCPBG00000009615)	RBIS (ENSCPBG00000009621)	E2F5 (ENSCPBG00000009625)	LRRCC1 (ENSCPBG00000009631)	ENSCPBG00000009639	DENND1A (ENSCPBG00000009676) #18	CRB2 (ENSCPBG00000009754) #19	STRBP (ENSCPBG00000009770) #20	RABGAP1 (ENSCPBG00000009786) #21	ZBTB26 (ENSCPBG00000009793) #22	ZBTB6 (ENSCPBG00000009796) #23	RC3H2 (ENSCPBG00000009811) #24	PDCL (ENSCPBG00000009868) #25	PTGS1 (ENSCPBG00000009876) #27	MRRF (ENSCPBG00000009881) #28	RBM18 (ENSCPBG00000009885) #29	LHX6 (ENSCPBG00000009892) #30	MORN5 (ENSCPBG00000009903) #31	NDUFA8 (ENSCPBG00000009908) #32	ENSCPBG00000009911	TTLL11 (ENSCPBG00000009920) #33	DAB2IP (ENSCPBG00000009928) #34	STOM (ENSCPBG00000009935) #36	GSN (ENSCPBG00000009937) #37	RAB14 (ENSCPBG00000009941)
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00940000158501 #8	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000156689.cb #33	ENSGT00940000156689.bb #33	ENSGT00940000155853 #34	ENSGT01030000234614.B.a.a.a #36	ENSGT00940000155591 #37	ENSGT00940000155178
Abingdon island giant tortoise	MODERN SPECIES	2600	ARPC5L (ENSCABG00000000431) #8	GOLGA1 (ENSCABG00000000473) #7	SCAI (ENSCABG00000000867)	RPL35 (ENSCABG00000000871) #9	OLFML2A (ENSCABG00000000874) #11	NR6A1 (ENSCABG00000000881) #12	NR5A1 (ENSCABG00000000895) #13	ADGRD2 (ENSCABG00000000904) #14	PSMB7 (ENSCABG00000000915) #16	NEK6 (ENSCABG00000000924) #15	LHX2 (ENSCABG00000000963) #17	DENND1A (ENSCABG00000001004) #18	CRB2 (ENSCABG00000001608) #19	STRBP (ENSCABG00000001615) #20	RABGAP1 (ENSCABG00000001622) #21	ZBTB26 (ENSCABG00000001626) #22	ZBTB6 (ENSCABG00000001629) #23	RC3H2 (ENSCABG00000001633) #24	PDCL (ENSCABG00000001644) #25	PTGS1 (ENSCABG00000001646) #27	MRRF (ENSCABG00000001662) #28	RBM18 (ENSCABG00000001664) #29	LHX6 (ENSCABG00000001667) #30	ENSCABG00000001674	NDUFA8 (ENSCABG00000001677) #32	ENSCABG00000001683 #33	ENSCABG00000001688 #33	DAB2IP (ENSCABG00000001692) #34	STOM (ENSCABG00000001697) #36	GSN (ENSCABG00000001704) #37	RAB14 (ENSCABG00000001710)
Goode s thornscrub tortoise	MODERN SPECIES	7	ARPC5L (ENSGEVG00005006487) #8	GOLGA1 (ENSGEVG00005006470) #7	SCAI (ENSGEVG00005006414)	RPL35 (ENSGEVG00005006381) #9	OLFML2A (ENSGEVG00005006363) #11	NR6A1 (ENSGEVG00005006341) #12	NR5A1 (ENSGEVG00005006277) #13	ADGRD2 (ENSGEVG00005006212) #14	PSMB7 (ENSGEVG00005006184) #16	NEK6 (ENSGEVG00005006167) #15	LHX2 (ENSGEVG00005006137) #17	DENND1A (ENSGEVG00005006000) #18	CRB2 (ENSGEVG00005005877) #19	STRBP (ENSGEVG00005005803) #20	RABGAP1 (ENSGEVG00005005698) #21	ZBTB26 (ENSGEVG00005005652) #22	ZBTB6 (ENSGEVG00005005638) #23	RC3H2 (ENSGEVG00005005601) #24	PDCL (ENSGEVG00005005578) #25	PTGS1 (ENSGEVG00005005484) #27	MRRF (ENSGEVG00005005435) #28	RBM18 (ENSGEVG00005005423) #29	LHX6 (ENSGEVG00005005392) #30	MORN5 (ENSGEVG00005005343) #31	NDUFA8 (ENSGEVG00005005313) #32	ENSGEVG00005005297 #33	ENSGEVG00005005273 #33	DAB2IP (ENSGEVG00005005158) #34	TTLL13 (ENSGEVG00005005006)	STOM (ENSGEVG00005004957) #36	GSN (ENSGEVG00005004900) #37
Chinese turtle	MODERN SPECIES	996						NR6A1 (ENSPSIG00000006445) #12	NR5A1 (ENSPSIG00000006131) #13	ADGRD2 (ENSPSIG00000005660) #14	PSMB7 (ENSPSIG00000005319) #16	NEK6 (ENSPSIG00000004968) #15	LHX2 (ENSPSIG00000004916) #17	DENND1A (ENSPSIG00000004571) #18	CRB2 (ENSPSIG00000006404) #19	STRBP (ENSPSIG00000005799) #20	RABGAP1 (ENSPSIG00000005734) #21	ZBTB26 (ENSPSIG00000001041) #22	ZBTB6 (ENSPSIG00000001016) #23	RC3H2 (ENSPSIG00000005393) #24	PDCL (ENSPSIG00000005382) #25	PTGS1 (ENSPSIG00000004843) #27	ENSPSIG00000004819
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00940000153772.B #7	ENSGT00390000009566	ENSGT00390000016384 #9	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B
Episquamata	ANCESTRAL SPECIES	15	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B	ENSGT00940000164721
Laterata	ANCESTRAL SPECIES	20	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00910000145076	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00940000164999	ENSGT00940000156689 #33	ENSGT00940000155853 #34	ENSGT00950000182858.B	ENSGT00940000164721
Argentine black and white tegu	MODERN SPECIES	52	GLE1 (ENSSMRG00000011380)	SPTAN1 (ENSSMRG00000011381)	DYNC2I2 (ENSSMRG00000011392)	ENSSMRG00000011395	OLFML2A (ENSSMRG00000011397) #11	NR6A1 (ENSSMRG00000011400) #12	NR5A1 (ENSSMRG00000011420) #13	ADGRD2 (ENSSMRG00000011422) #14	PSMB7 (ENSSMRG00000011425) #16	NEK6 (ENSSMRG00000011428) #15	LHX2 (ENSSMRG00000011455) #17	DENND1A (ENSSMRG00000011462) #18	CRB2 (ENSSMRG00000011466) #19	STRBP (ENSSMRG00000011471) #20	RABGAP1 (ENSSMRG00000011478) #21	ZBTB26 (ENSSMRG00000011482) #22	ZBTB6 (ENSSMRG00000011483) #23	RC3H2 (ENSSMRG00000011484) #24	PDCL (ENSSMRG00000011485) #25	ENSSMRG00000011486	ENSSMRG00000011487	PTGS1 (ENSSMRG00000011488) #27	MRRF (ENSSMRG00000011490) #28	RBM18 (ENSSMRG00000011491) #29	LHX6 (ENSSMRG00000011499) #30	MORN5 (ENSSMRG00000011506) #31	NDUFA8 (ENSSMRG00000011511) #32	ENSSMRG00000011514	TTLL11 (ENSSMRG00000011516) #33	DAB2IP (ENSSMRG00000011519) #34	GLT6D1 (ENSSMRG00000011525)
Common wall lizard	MODERN SPECIES	419				NR6A1 (ENSPMRG00000022963) #12	NR5A1 (ENSPMRG00000022986) #13	ENSPMRG00000022990	ADGRD2 (ENSPMRG00000022995) #14	PSMB7 (ENSPMRG00000023012) #16	NEK6 (ENSPMRG00000023018) #15	LHX2 (ENSPMRG00000023023) #17	DENND1A (ENSPMRG00000023031) #18	CRB2 (ENSPMRG00000023040) #19	STRBP (ENSPMRG00000023046) #20	RABGAP1 (ENSPMRG00000023062) #21	GPR21 (ENSPMRG00000023073)	ZBTB26 (ENSPMRG00000023076) #22	ZBTB6 (ENSPMRG00000023078) #23	RC3H2 (ENSPMRG00000023084) #24	ENSPMRG00000023093	ENSPMRG00000023095 #25	ENSPMRG00000023100	ENSPMRG00000023104 #27	ENSPMRG00000023113 #27	MRRF (ENSPMRG00000023124) #28	ENSPMRG00000023128	RBM18 (ENSPMRG00000023130) #29	LHX6 (ENSPMRG00000023138) #30	ENSPMRG00000023144	ENSPMRG00000023148 #32	ENSPMRG00000023149	TTLL11 (ENSPMRG00000023154) #33
Toxicofera	ANCESTRAL SPECIES	33	ENSGT00390000012903	ENSGT00940000156662.d.a	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685 #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27
Elapidae	ANCESTRAL SPECIES	18	ENSGT00530000063497.a	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000161534 #14	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00950000183101.a.b.b #19	ENSGT00940000154687.B #20	ENSGT00940000157216 #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685.c #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27
Indian cobra	MODERN SPECIES	8	PTGES2 (ENSNNAG00000018202)	ODF2 (ENSNNAG00000018197)	GLE1 (ENSNNAG00000018191)	SPTAN1 (ENSNNAG00000014617)	DYNC2I2 (ENSNNAG00000013945)	NR6A1 (ENSNNAG00000013915) #12	NR5A1 (ENSNNAG00000013903) #13	ADGRD2 (ENSNNAG00000013875) #14	PSMB7 (ENSNNAG00000013841) #16	NEK6 (ENSNNAG00000013809) #15	LHX2 (ENSNNAG00000013790) #17	DENND1A (ENSNNAG00000013708) #18	CRB2 (ENSNNAG00000013681) #19	STRBP (ENSNNAG00000013632) #20	RABGAP1 (ENSNNAG00000013110) #21	ZBTB26 (ENSNNAG00000013061) #22	ZBTB6 (ENSNNAG00000013051) #23	RC3H2 (ENSNNAG00000012766) #24	PTGS1 (ENSNNAG00000012718) #27	ENSNNAG00000012633	ENSNNAG00000012621	ENSNNAG00000012616	FBXW2 (ENSNNAG00000012587)	SLC2A8 (ENSNNAG00000012548)	GARNL3 (ENSNNAG00000010108)	ENSNNAG00000009966 #36	ENSNNAG00000009884 #36	ENSNNAG00000009870 #36	GSN (ENSNNAG00000009769) #37	RAB14 (ENSNNAG00000009717)	CNTRL (ENSNNAG00000008847)
Elapidae_a	ANCESTRAL SPECIES	53	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00940000160615.a.b.pb.b	ENSGT00940000167684	ENSGT00940000154687.B #20	ENSGT00940000157216.a.a #21	ENSGT00940000157216.a.b #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685.c #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27
Acanthophiinae	ANCESTRAL SPECIES	48	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194 #11	ENSGT00940000157936 #12	ENSGT00940000153391.c.b.a #13	ENSGT00940000157419 #16	ENSGT00940000159990 #15	ENSGT00940000158540 #17	ENSGT00940000156261 #18	ENSGT00940000160615.a.b.pb.b	ENSGT00940000167684	ENSGT00940000154687.B.o #20	ENSGT00940000157216.a.a #21	ENSGT00940000157216.a.b #21	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000157685.c #24	ENSGT00940000159569 #25	ENSGT00390000010743.b #27
Mainland tiger snake	MODERN SPECIES	479													ENSNSUG00000002793	ENSNSUG00000002796 #20	RABGAP1 (ENSNSUG00000002797) #21	ZBTB26 (ENSNSUG00000002917) #22	RC3H2 (ENSNSUG00000002918) #24
Eastern brown snake	MODERN SPECIES	54	ODF2 (ENSPTXG00000011377)	GLE1 (ENSPTXG00000011368)	SPTAN1 (ENSPTXG00000009090)	DYNC2I2 (ENSPTXG00000009052)	OLFML2A (ENSPTXG00000009050) #11	NR6A1 (ENSPTXG00000009049) #12	NR5A1 (ENSPTXG00000008944) #13	PSMB7 (ENSPTXG00000008942) #16	NEK6 (ENSPTXG00000008940) #15	LHX2 (ENSPTXG00000008939) #17	DENND1A (ENSPTXG00000008938) #18	ENSPTXG00000008937	ENSPTXG00000008936 #20	ENSPTXG00000008935 #20	RABGAP1 (ENSPTXG00000008930) #21	ZBTB26 (ENSPTXG00000008926) #22	ZBTB6 (ENSPTXG00000008925) #23	RC3H2 (ENSPTXG00000008923) #24	PDCL (ENSPTXG00000008922) #25	PTGS1 (ENSPTXG00000008909) #27	ENSPTXG00000008907	ENSPTXG00000008906	ENSPTXG00000008905
Blue-lipped sea krait	MODERN SPECIES	4622																ZBTB26 (ENSLLTG00000007299) #22	ZBTB6 (ENSLLTG00000007256) #23	ENSLLTG00000007237 #24
Anura	ANCESTRAL SPECIES	127								ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868 #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000161459 #23	ENSGT00940000163543	ENSGT00940000157216 #21	ENSGT00940000154687.B #20	ENSGT00950000183101.a.b.b #19	ENSGT00940000156261.a #18	ENSGT00940000158540 #17	ENSGT00940000159990 #15	ENSGT00940000157419 #16	ENSGT00940000161534 #14	ENSGT00940000153391.c.b.a #13	ENSGT00940000157936 #12	ENSGT00940000157194 #11	ENSGT00390000016384 #9	ENSGT00940000158501 #8
Frog	MODERN SPECIES	8	tnfsf15 (ENSXETG00000042774)	ENSXETG00000039224	ENSXETG00000048849	anapc13.1 (ENSXETG00000025461)	ptgs1 (ENSXETG00000016336) #27	pdcl (ENSXETG00000016335) #25	ENSXETG00000046420	ENSXETG00000045081	mrrf (ENSXETG00000016327) #28	ENSXETG00000035538	rbm18 (ENSXETG00000038367) #29	lhx6 (ENSXETG00000016325) #30	morn5 (ENSXETG00000016326) #31	ndufa8 (ENSXETG00000016324) #32	krt18.2 (ENSXETG00000020532)	zbtb26 (ENSXETG00000042339) #22	zbtb6 (ENSXETG00000020530) #23	shroom4 (ENSXETG00000030777)	ENSXETG00000035602	ENSXETG00000046383	CITED1 (ENSXETG00000046523)	hdac8 (ENSXETG00000020527)	XB995740 [provisional] (ENSXETG00000048770)	phka1 (ENSXETG00000018114)	XB940377 (ENSXETG00000045479)	ENSXETG00000041787	ENSXETG00000046837	ENSXETG00000048029	ENSXETG00000049475	ENSXETG00000045370	XB994497 [provisional] (ENSXETG00000047006)
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000010935	MRRF (ENSLLEG00000010984) #28	ENSLLEG00000011055	ENSLLEG00000011120	RBM18 (ENSLLEG00000011151) #29	LHX6 (ENSLLEG00000011213) #30	ENSLLEG00000011371	MORN5 (ENSLLEG00000011404) #31	ENSLLEG00000011593	NDUFA8 (ENSLLEG00000011607) #32	ENSLLEG00000011693	ENSLLEG00000011705	ENSLLEG00000011717	ENSLLEG00000011741	ENSLLEG00000011807	ZBTB26 (ENSLLEG00000011941) #22	ZBTB6 (ENSLLEG00000011965) #23	ENSLLEG00000011983	RABGAP1 (ENSLLEG00000012034) #21	STRBP (ENSLLEG00000012560) #20	ENSLLEG00000012676	ENSLLEG00000012686	ENSLLEG00000012716	ENSLLEG00000012741	ENSLLEG00000012760	CRB2 (ENSLLEG00000020099) #19	ENSLLEG00000020201	ENSLLEG00000020398	ENSLLEG00000020455 #18	ENSLLEG00000020786	ENSLLEG00000020809
Actinopterygii	ANCESTRAL SPECIES	70	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000153189.B	ENSGT00950000183190.a.b.b	ENSGT00390000011509	ENSGT00390000008732.b	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00910000145076	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.g #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000157685 #24	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000154687.B #20	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00730000111240	ENSGT00390000004247	ENSGT00940000158646	ENSGT00390000009349	ENSGT00940000160710	ENSGT00940000159447	ENSGT00940000159387
Neopterygii	ANCESTRAL SPECIES	65	ENSGT00940000163466	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000153189.B	ENSGT00950000183190.a.b.b	ENSGT00390000011509	ENSGT00390000008732.b	ENSGT00940000159569 #25	ENSGT00390000010743.b #27	ENSGT00390000005084 #28	ENSGT00390000013765 #29	ENSGT00940000156868.g #30	ENSGT00390000018089 #31	ENSGT00390000008938 #32	ENSGT00950000182969.A	ENSGT00940000157920.a #22	ENSGT00940000157685 #24	ENSGT00940000157216 #21	ENSGT00940000163543	ENSGT00940000154687.B #20	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00730000111240	ENSGT00390000004247	ENSGT00940000157589	ENSGT00940000166736	ENSGT00530000063085.B	ENSGT00940000159387	ENSGT00940000159447
Osteoglossocephalai	ANCESTRAL SPECIES	501															ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Clupeocephala	ANCESTRAL SPECIES	260					ENSGT00940000162727.a.a	ENSGT00940000156880.c.b	ENSGT00950000182975.a.a.b.k	ENSGT00390000014658	ENSGT00940000157157.b.a.a	ENSGT00940000158199	ENSGT00940000156724	ENSGT00940000168178	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b #20	ENSGT00940000167684	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049
Euteleosteomorpha	ANCESTRAL SPECIES	82	ENSGT00390000008206	ENSGT00940000154043.A.j.a	ENSGT00940000163579	ENSGT00940000164473	ENSGT00940000162727.a.a	ENSGT00940000156880.c.b	ENSGT00950000182975.a.a.b.k	ENSGT00390000014658	ENSGT00940000157157.b.a.a	ENSGT00940000158199	ENSGT00940000156724	ENSGT00940000167162	ENSGT00390000010743.b.b #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b #20	ENSGT00940000167684	ENSGT00730000111240	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795
Acanthomorphata	ANCESTRAL SPECIES	27														ENSGT00610000087405	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT00390000004906.a.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT00390000004906.a.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT00390000004906.a.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b
Tiger tail seahorse	MODERN SPECIES	341	MXD1 (ENSHCOG00000004368)	zgc:65851 (ENSHCOG00000005156)	cds2 (ENSHCOG00000005262)	arhgap25 (ENSHCOG00000005276)	bmp10 (ENSHCOG00000005298)	ENSHCOG00000005308	ERLIN2 (ENSHCOG00000005323)	znf703 (ENSHCOG00000005333)	ENSHCOG00000005356	rchy1 (ENSHCOG00000005380)	ENSHCOG00000005435	smad2 (ENSHCOG00000005469)	IER3IP1 (ENSHCOG00000005478)	ENSHCOG00000005488	ENSHCOG00000005510	zbtb26 (ENSHCOG00000005521) #22	gucd1 (ENSHCOG00000005532)	ENSHCOG00000005545	adora2aa (ENSHCOG00000005571)	specc1la (ENSHCOG00000005604)	si:dkey-91m11.5 (ENSHCOG00000005647)	ift81 (ENSHCOG00000005677)	ENSHCOG00000005728	anapc7 (ENSHCOG00000005762)	ENSHCOG00000005765	ENSHCOG00000005783	pptc7a (ENSHCOG00000005805)	PPP1CA (ENSHCOG00000005828)	ENSHCOG00000005847	CUX2 (ENSHCOG00000005886)	mtmr3 (ENSHCOG00000005949)
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Cichlidae	ANCESTRAL SPECIES	29	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	26	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	28	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Haplochromini	ANCESTRAL SPECIES	30	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892.d	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Burton s mouthbrooder	MODERN SPECIES	561											ENSHBUG00000001753	smad2 (ENSHBUG00000001737)	IER3IP1 (ENSHBUG00000001718)	ENSHBUG00000001712	ENSHBUG00000001706	zbtb26 (ENSHBUG00000001692) #22	p2rx4b (ENSHBUG00000001664)	gucd1 (ENSHBUG00000001617)	upb1 (ENSHBUG00000001606)	adora2aa (ENSHBUG00000001594)	specc1la (ENSHBUG00000000009)	si:dkey-91m11.5 (ENSHBUG00000001577)	ift81 (ENSHBUG00000001544)	ENSHBUG00000001521	anapc7 (ENSHBUG00000001499)	ENSHBUG00000001493	ENSHBUG00000001488	rad9b (ENSHBUG00000001484)	pptc7a (ENSHBUG00000001479)	PPP1CA (ENSHBUG00000001473)	myl2b (ENSHBUG00000001469)
Haplochromini_A	ANCESTRAL SPECIES	32	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892.d	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Haplochromini_B	ANCESTRAL SPECIES	44	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892.d	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Zebra mbuna	MODERN SPECIES	1094	MXD1 (ENSMZEG00005001624)	zgc:65851 (ENSMZEG00005001648)	cds2 (ENSMZEG00005001656)	arhgap25 (ENSMZEG00005001711)	bmp10 (ENSMZEG00005001718)	ENSMZEG00005001721	ERLIN2 (ENSMZEG00005001728)	znf703 (ENSMZEG00005001762)	ENSMZEG00005001792	rchy1 (ENSMZEG00005001846)	ENSMZEG00005001895	smad2 (ENSMZEG00005001954)	IER3IP1 (ENSMZEG00005001988)	ENSMZEG00005002003	ENSMZEG00005002014	zbtb26 (ENSMZEG00005002025) #22	p2rx4b (ENSMZEG00005002040)	gucd1 (ENSMZEG00005002152)	upb1 (ENSMZEG00005002166)	adora2aa (ENSMZEG00005002189)	specc1la (ENSMZEG00005002203)	si:dkey-91m11.5 (ENSMZEG00005002251)	ift81 (ENSMZEG00005002321)	ENSMZEG00005002369	anapc7 (ENSMZEG00005002432)	ENSMZEG00005002462	ENSMZEG00005002502	ENSMZEG00005002513	pptc7a (ENSMZEG00005002544)	ENSMZEG00005002573	PPP1CA (ENSMZEG00005002592)
Eastern happy	MODERN SPECIES	3	cds2 (ENSACLG00000002693)	arhgap25 (ENSACLG00000002683)	bmp10 (ENSACLG00000002672)	ENSACLG00000002628	ENSACLG00000002614	ERLIN2 (ENSACLG00000002557)	ENSACLG00000002383	znf703 (ENSACLG00000002355)	ENSACLG00000002317	rchy1 (ENSACLG00000002264)	ENSACLG00000002164	smad2 (ENSACLG00000002104)	IER3IP1 (ENSACLG00000001771)	ENSACLG00000001755	ENSACLG00000001711	zbtb26 (ENSACLG00000001703) #22	p2rx4b (ENSACLG00000001690)	gucd1 (ENSACLG00000001675)	upb1 (ENSACLG00000001633)	adora2aa (ENSACLG00000001615)	specc1la (ENSACLG00000001600)	si:dkey-91m11.5 (ENSACLG00000001482)	ift81 (ENSACLG00000001422)	ENSACLG00000001375	anapc7 (ENSACLG00000001331)	ENSACLG00000001288	ENSACLG00000001276	rad9b (ENSACLG00000001251)	pptc7a (ENSACLG00000001225)	PPP1CA (ENSACLG00000001198)	myl2b (ENSACLG00000001164)
P. nyererei	MODERN SPECIES	467	zgc:65851 (ENSPNYG00000008635)	cds2 (ENSPNYG00000008572)	arhgap25 (ENSPNYG00000008542)	bmp10 (ENSPNYG00000008532)	ENSPNYG00000008497	ERLIN2 (ENSPNYG00000008461)	znf703 (ENSPNYG00000008429)	ENSPNYG00000008384	rchy1 (ENSPNYG00000008332)	ENSPNYG00000008287	smad2 (ENSPNYG00000008249)	IER3IP1 (ENSPNYG00000008229)	ENSPNYG00000008219	ENSPNYG00000008199	ENSPNYG00000008170	zbtb26 (ENSPNYG00000008162) #22	p2rx4b (ENSPNYG00000008055)	gucd1 (ENSPNYG00000008005)	upb1 (ENSPNYG00000007983)	adora2aa (ENSPNYG00000007971)	specc1la (ENSPNYG00000007952)	si:dkey-91m11.5 (ENSPNYG00000007888)	ift81 (ENSPNYG00000007840)	ENSPNYG00000007734	anapc7 (ENSPNYG00000007681)	ENSPNYG00000007659	ENSPNYG00000007639	ENSPNYG00000007618	pptc7a (ENSPNYG00000007599)	PPP1CA (ENSPNYG00000007572)	myl2b (ENSPNYG00000007557)
Lyretail cichlid	MODERN SPECIES	340	ENSNBRG00000009918	zgc:65851 (ENSNBRG00000009929)	cds2 (ENSNBRG00000009944)	arhgap25 (ENSNBRG00000009978)	bmp10 (ENSNBRG00000010031)	ENSNBRG00000010066	ERLIN2 (ENSNBRG00000010124)	znf703 (ENSNBRG00000010152)	ENSNBRG00000010172	ENSNBRG00000010201	ENSNBRG00000010222	smad2 (ENSNBRG00000010263)	IER3IP1 (ENSNBRG00000010285)	ENSNBRG00000010296	ENSNBRG00000010304	zbtb26 (ENSNBRG00000010364) #22	p2rx4b (ENSNBRG00000010380)	gucd1 (ENSNBRG00000010476)	upb1 (ENSNBRG00000010516)	ENSNBRG00000010541	adora2aa (ENSNBRG00000010557)	specc1la (ENSNBRG00000010612)	si:dkey-91m11.5 (ENSNBRG00000010650)	ENSNBRG00000010693	ift81 (ENSNBRG00000010706)	ENSNBRG00000010754	ENSNBRG00000010814	ENSNBRG00000010829	pptc7a (ENSNBRG00000010870)	PPP1CA (ENSNBRG00000010882)	myl2b (ENSNBRG00000010909)
Nile tilapia	MODERN SPECIES	3	zgc:65851 (ENSONIG00000015873)	ENSONIG00000036935	cds2 (ENSONIG00000015879)	arhgap25 (ENSONIG00000015885)	bmp10 (ENSONIG00000036354)	ENSONIG00000015888	ERLIN2 (ENSONIG00000015889)	znf703 (ENSONIG00000041135)	ENSONIG00000015897	rchy1 (ENSONIG00000015900)	ENSONIG00000015906	smad2 (ENSONIG00000015908)	IER3IP1 (ENSONIG00000037020)	ENSONIG00000039959	ENSONIG00000015911	zbtb26 (ENSONIG00000020657) #22	p2rx4b (ENSONIG00000015912)	gucd1 (ENSONIG00000037363)	upb1 (ENSONIG00000015923)	ENSONIG00000040802	adora2a (ENSONIG00000032812)	specc1la (ENSONIG00000015931)	si:dkey-91m11.5 (ENSONIG00000015935)	ift81 (ENSONIG00000015939)	ENSONIG00000015946	anapc7 (ENSONIG00000015954)	ENSONIG00000015958	ENSONIG00000034981	ENSONIG00000030030	rad9b (ENSONIG00000015959)	pptc7a (ENSONIG00000015960)
Midas cichlid	MODERN SPECIES	1182	cyb561a3a (ENSACIG00000008960)	loxl2b (ENSACIG00000009010)	GOLGA7 (ENSACIG00000009055)	sfrp1a (ENSACIG00000009067)	ENSACIG00000009080	tcima (ENSACIG00000009100)	ENSACIG00000009138	adam28 (ENSACIG00000009186)	adam28 (ENSACIG00000009295)	ppp3cca (ENSACIG00000010002)	vps37ba (ENSACIG00000010033)	abcb9 (ENSACIG00000010067)	zgc:113436 (ENSACIG00000010120)	ENSACIG00000010152	ENSACIG00000010158	zbtb26 (ENSACIG00000010275) #22	p2rx4b (ENSACIG00000010294)	gucd1 (ENSACIG00000010383)	upb1 (ENSACIG00000010407)	ENSACIG00000010433	ENSACIG00000010441	specc1la (ENSACIG00000010447)	si:dkey-91m11.5 (ENSACIG00000010490)	ift81 (ENSACIG00000010552)	ATP2A1 (ENSACIG00000010593)	anapc7 (ENSACIG00000010632)	ENSACIG00000010664	ENSACIG00000010781	ENSACIG00000010791	pptc7a (ENSACIG00000010805)	PPP1CA (ENSACIG00000010848)
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Amphiprion	ANCESTRAL SPECIES	18	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Clown anemonefish	MODERN SPECIES	2299								ENSAOCG00000011152	ENSAOCG00000011133	ENSAOCG00000011068	ENSAOCG00000011033	smad2 (ENSAOCG00000001841)	IER3IP1 (ENSAOCG00000000685)	ENSAOCG00000010887	ENSAOCG00000010872	zbtb26 (ENSAOCG00000010836) #22	p2rx4b (ENSAOCG00000010827)
Orange clownfish	MODERN SPECIES	19	MXD1 (ENSAPEG00000002731)	zgc:65851 (ENSAPEG00000002722)	cds2 (ENSAPEG00000002692)	arhgap25 (ENSAPEG00000002676)	bmp10 (ENSAPEG00000002643)	ENSAPEG00000002634	ERLIN2 (ENSAPEG00000002583)	znf703 (ENSAPEG00000002555)	ENSAPEG00000002524	ENSAPEG00000002468	ENSAPEG00000002416	smad2 (ENSAPEG00000002366)	IER3IP1 (ENSAPEG00000002338)	ENSAPEG00000002324	ENSAPEG00000002311	zbtb26 (ENSAPEG00000002302) #22	p2rx4b (ENSAPEG00000002177)	gucd1 (ENSAPEG00000002110)	upb1 (ENSAPEG00000002088)	ENSAPEG00000002078	adora2aa (ENSAPEG00000002062)	specc1la (ENSAPEG00000002048)	si:dkey-91m11.5 (ENSAPEG00000001963)	ift81 (ENSAPEG00000001879)	ENSAPEG00000001821	anapc7 (ENSAPEG00000001774)	ENSAPEG00000001740	ENSAPEG00000001691	rad9b (ENSAPEG00000001635)	pptc7a (ENSAPEG00000001608)	PPP1CA (ENSAPEG00000001564)
Spiny chromis	MODERN SPECIES	1394																zbtb26 (ENSAPOG00000023896) #22	p2rx4b (ENSAPOG00000000808)	gucd1 (ENSAPOG00000023508)	upb1 (ENSAPOG00000023451)	adora2aa (ENSAPOG00000023402)	specc1la (ENSAPOG00000023328)	si:dkey-91m11.5 (ENSAPOG00000023021)	ift81 (ENSAPOG00000022898)	ENSAPOG00000022830
Bicolor damselfish	MODERN SPECIES	585																zbtb26 (ENSSPAG00000007553) #22	p2rx4b (ENSSPAG00000007567)	gucd1 (ENSSPAG00000007601)	upb1 (ENSSPAG00000007643)	ENSSPAG00000007654	adora2aa (ENSSPAG00000007665)	specc1la (ENSSPAG00000007680)	si:dkey-91m11.5 (ENSSPAG00000007710)	ift81 (ENSSPAG00000007823)	ENSSPAG00000007868	anapc7 (ENSSPAG00000007943)	ENSSPAG00000007986	ENSSPAG00000008005	ENSSPAG00000008016	pptc7a (ENSSPAG00000008027)	PPP1CA (ENSSPAG00000008050)
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Aplocheiloidei	ANCESTRAL SPECIES	20	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Mangrove rivulus	MODERN SPECIES	30	ENSKMAG00000008432	bmp10 (ENSKMAG00000008412)	arhgap25 (ENSKMAG00000008391)	cds2 (ENSKMAG00000008314)	zgc:65851 (ENSKMAG00000008283)	ENSKMAG00000008253	snrnp27 (ENSKMAG00000008233)	znf703 (ENSKMAG00000008217)	TIA1 (ENSKMAG00000008202)	rchy1 (ENSKMAG00000008163)	ENSKMAG00000008095	smad2 (ENSKMAG00000008041)	IER3IP1 (ENSKMAG00000008013)	si:ch73-130a3.4 (ENSKMAG00000007988)	ENSKMAG00000007964	zbtb26 (ENSKMAG00000007952) #22	p2rx4b (ENSKMAG00000007838)	gucd1 (ENSKMAG00000007796)	upb1 (ENSKMAG00000007759)	ENSKMAG00000007740	adora2aa (ENSKMAG00000007729)	specc1la (ENSKMAG00000007691)	si:dkey-91m11.5 (ENSKMAG00000007584)	ift81 (ENSKMAG00000007475)	ENSKMAG00000007392	anapc7 (ENSKMAG00000007339)	ENSKMAG00000007321	rad9b (ENSKMAG00000007302)	pptc7a (ENSKMAG00000007280)	PPP1CA (ENSKMAG00000007243)	myl2b (ENSKMAG00000007190)
Turquoise killifish	MODERN SPECIES	1627	bmp10 (ENSNFUG00015024219)	ARHGAP25 (ENSNFUG00015024216)	CDS2 (ENSNFUG00015024073)	Nfu_g_1_009071 (ENSNFUG00015024058)	MXD1 (ENSNFUG00015024056)	SNRNP27 (ENSNFUG00015024051)	ZNF703 (ENSNFUG00015024050)	ENSNFUG00015024031	rchy1 (ENSNFUG00015024027)	ENSNFUG00015024019	SMAD2 (ENSNFUG00015023992)	IER3IP1 (ENSNFUG00015023990)	ENSNFUG00015023989	ENSNFUG00015023988	ENSNFUG00015023984	ZBTB26 (ENSNFUG00015023983) #22	p2rx4b (ENSNFUG00015023982)	GUCD1 (ENSNFUG00015023978)	MTMR3 (ENSNFUG00015023350)	CUX2 (ENSNFUG00015023283)	myl2b (ENSNFUG00015023269)	PPP1CA (ENSNFUG00015023258)	pptc7a (ENSNFUG00015023252)	ENSNFUG00015023249	ENSNFUG00015023243	ENSNFUG00015023241	UBE2G1B (ENSNFUG00015023228)	ANAPC7 (ENSNFUG00015023217)	ATP2A1 (ENSNFUG00015023141)	IFT81 (ENSNFUG00015022937)	BCR (ENSNFUG00015021672)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a	ENSGT00940000160241
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b.h	ENSGT00940000155578.e.a	ENSGT00940000160241
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b.g	ENSGT00940000155578.e.a	ENSGT00940000160241
NAME_6	ANCESTRAL SPECIES	113	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a.h	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b.g	ENSGT00940000155578.e.a	ENSGT00940000160241
Amazon molly	MODERN SPECIES	559												ENSPFOG00000001278	smad2 (ENSPFOG00000001408)	ENSPFOG00000001474	ENSPFOG00000001523	zbtb26 (ENSPFOG00000001590) #22	p2rx4b (ENSPFOG00000001730)	gucd1 (ENSPFOG00000002062)	upb1 (ENSPFOG00000002146)	adora2aa (ENSPFOG00000002320)	specc1la (ENSPFOG00000002329)	si:dkey-91m11.5 (ENSPFOG00000002503)	ift81 (ENSPFOG00000003076)	ATP2A1 (ENSPFOG00000003392)	anapc7 (ENSPFOG00000004609)	ENSPFOG00000004734	rad9b (ENSPFOG00000004776)	pptc7a (ENSPFOG00000004803)	PPP1CA (ENSPFOG00000004821)	PPP1CA (ENSPFOG00000004951)	myl2b (ENSPFOG00000005135)
Sailfin molly	MODERN SPECIES	1748											ENSPLAG00000008552	smad2 (ENSPLAG00000008534)	ENSPLAG00000008489	ENSPLAG00000008476	ENSPLAG00000008461	zbtb26 (ENSPLAG00000008402) #22	p2rx4b (ENSPLAG00000008388)	gucd1 (ENSPLAG00000008265)	upb1 (ENSPLAG00000008256)	adora2aa (ENSPLAG00000008221)
Guppy	MODERN SPECIES	461	golph3a (ENSPREG00000017148)	ENSPREG00000017130	ENSPREG00000017103	isl1a (ENSPREG00000017077)	TOP3B (ENSPREG00000017020)	ENSPREG00000016987	ENSPREG00000016969	ENSPREG00000016907	niban2b (ENSPREG00000016862)	stxbp1b (ENSPREG00000016828)	WHRN (ENSPREG00000016804)	ENSPREG00000016774	dpp7 (ENSPREG00000016722)	man1b1b (ENSPREG00000016648)	cacna1ba (ENSPREG00000016567)	zbtb26 (ENSPREG00000016555) #22	p2rx4b (ENSPREG00000016536)	gucd1 (ENSPREG00000016512)	upb1 (ENSPREG00000016471)	adora2aa (ENSPREG00000016442)	specc1la (ENSPREG00000016369)	ENSPREG00000016328	si:dkey-91m11.5 (ENSPREG00000016304)	ift81 (ENSPREG00000016265)	ATP2A1 (ENSPREG00000016155)	anapc7 (ENSPREG00000016100)	ENSPREG00000016084	pptc7a (ENSPREG00000016072)	PPP1CA (ENSPREG00000016046)	rad9b (ENSPREG00000016000)	myl2b (ENSPREG00000015972)
Platyfish	MODERN SPECIES	2	bmp10 (ENSXMAG00000028275)	ENSXMAG00000004613	cds2 (ENSXMAG00000004583)	zgc:65851 (ENSXMAG00000004574)	MXD1 (ENSXMAG00000029706)	snrnp27 (ENSXMAG00000027366)	znf703 (ENSXMAG00000004564)	ENSXMAG00000026211	ENSXMAG00000023528	rchy1 (ENSXMAG00000028824)	ENSXMAG00000004512	smad2 (ENSXMAG00000004505)	IER3IP1 (ENSXMAG00000004503)	ENSXMAG00000029308	ENSXMAG00000004493	zbtb26 (ENSXMAG00000019575) #22	p2rx4b (ENSXMAG00000004452)	gucd1 (ENSXMAG00000004438)	upb1 (ENSXMAG00000004411)	adora2aa (ENSXMAG00000004409)	specc1la (ENSXMAG00000004383)	si:dkey-91m11.5 (ENSXMAG00000004350)	ift81 (ENSXMAG00000004329)	ATP2A1 (ENSXMAG00000004244)	anapc7 (ENSXMAG00000004226)	ENSXMAG00000021137	ENSXMAG00000004205	pptc7a (ENSXMAG00000029877)	PPP1CA (ENSXMAG00000021699)	myl2b (ENSXMAG00000004161)	ENSXMAG00000022801
NAME_4	ANCESTRAL SPECIES	43	ENSGT00940000167361	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a	ENSGT00940000160241
Mummichog	MODERN SPECIES	236	add2 (ENSFHEG00000006376)	ERLIN2 (ENSFHEG00000006359)	ENSFHEG00000006318	arhgap25 (ENSFHEG00000006308)	cds2 (ENSFHEG00000006284)	zgc:65851 (ENSFHEG00000006242)	MXD1 (ENSFHEG00000006222)	snrnp27 (ENSFHEG00000006199)	znf703 (ENSFHEG00000006178)	ENSFHEG00000006161	ENSFHEG00000006102	ENSFHEG00000006054	smad2 (ENSFHEG00000006030)	IER3IP1 (ENSFHEG00000005976)	ENSFHEG00000005960	zbtb26 (ENSFHEG00000005871) #22	p2rx4b (ENSFHEG00000005860)	gucd1 (ENSFHEG00000005758)	upb1 (ENSFHEG00000005749)	adora2aa (ENSFHEG00000005712)	specc1la (ENSFHEG00000005689)	si:dkey-91m11.5 (ENSFHEG00000005512)	ift81 (ENSFHEG00000005424)	ENSFHEG00000005386	anapc7 (ENSFHEG00000005286)	ENSFHEG00000005269	rad9b (ENSFHEG00000005243)	pptc7a (ENSFHEG00000005238)	PPP1CA (ENSFHEG00000005215)	MYL2 (ENSFHEG00000005178)	CUX2 (ENSFHEG00000005155)
Sheepshead minnow	MODERN SPECIES	918										TIA1 (ENSCVAG00000015489)	rchy1 (ENSCVAG00000015523)	ENSCVAG00000015535	smad2 (ENSCVAG00000015563)	IER3IP1 (ENSCVAG00000015567)	ENSCVAG00000000967	zbtb26 (ENSCVAG00000015601) #22	p2rx4b (ENSCVAG00000015605)	gucd1 (ENSCVAG00000015610)	upb1 (ENSCVAG00000015647)	adora2aa (ENSCVAG00000015653)	specc1la (ENSCVAG00000015815)	si:dkey-91m11.5 (ENSCVAG00000015928)	ENSCVAG00000015949
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT01000000218931	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Oryzias_b	ANCESTRAL SPECIES	61										ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT01000000218931	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Javanese ricefish	MODERN SPECIES	23	HIRA (ENSOJAG00000011013)	slc2a8 (ENSOJAG00000012106)	ENSOJAG00000012225	mymk (ENSOJAG00000012263)	ADAMTSL2 (ENSOJAG00000012310)	ENSOJAG00000012622	FAM163B (ENSOJAG00000012644)	ENSOJAG00000012657	ENSOJAG00000012683	ENSOJAG00000012698	ENSOJAG00000012748	ENSOJAG00000012765	smad2 (ENSOJAG00000013173)	ENSOJAG00000013343	ENSOJAG00000013360	zbtb26 (ENSOJAG00000013391) #22	p2rx4b (ENSOJAG00000013396)	gucd1 (ENSOJAG00000013521)	upb1 (ENSOJAG00000013557)	adora2aa (ENSOJAG00000013663)	specc1la (ENSOJAG00000013685)	ENSOJAG00000013904	si:dkey-91m11.5 (ENSOJAG00000014051)	ENSOJAG00000016230	ift81 (ENSOJAG00000016262)	ENSOJAG00000016379	anapc7 (ENSOJAG00000017740)	ENSOJAG00000017768	ENSOJAG00000017789	rad9b (ENSOJAG00000017799)	pptc7a (ENSOJAG00000017816)
Indian medaka	MODERN SPECIES	11	bmp10 (ENSOMEG00000020667)	ENSOMEG00000020684	ERLIN2 (ENSOMEG00000020793)	znf703 (ENSOMEG00000020827)	TIA1 (ENSOMEG00000020931)	tmem175 (ENSOMEG00000020978)	ENSOMEG00000021032	ENSOMEG00000021057	ENSOMEG00000021093	rchy1 (ENSOMEG00000021136)	ENSOMEG00000021184	smad2 (ENSOMEG00000021264)	IER3IP1 (ENSOMEG00000000664)	ENSOMEG00000021286	ENSOMEG00000021314	zbtb26 (ENSOMEG00000021329) #22	p2rx4b (ENSOMEG00000021354)	gucd1 (ENSOMEG00000021379)	upb1 (ENSOMEG00000021412)	adora2aa (ENSOMEG00000021428)	specc1la (ENSOMEG00000021510)	ENSOMEG00000021535	si:dkey-91m11.5 (ENSOMEG00000021614)	ift81 (ENSOMEG00000021713)	ATP2A1 (ENSOMEG00000021867)	anapc7 (ENSOMEG00000021932)	ENSOMEG00000021956	ENSOMEG00000021979	ENSOMEG00000021997	pptc7a (ENSOMEG00000022020)	PPP1CA (ENSOMEG00000022045)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT01000000218931	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Japanese Medaka HdrR	MODERN SPECIES	23	zgc:65851 (ENSORLG00000015480)	cds2 (ENSORLG00000015503)	arhgap25 (ENSORLG00000015524)	bmp10 (ENSORLG00000015531)	ENSORLG00000029762	ENSORLG00000015548	znf703 (ENSORLG00000015556)	ENSORLG00000027415	TIA1 (ENSORLG00000015642)	rchy1 (ENSORLG00000024685)	ENSORLG00000015660	smad2 (ENSORLG00000015683)	IER3IP1 (ENSORLG00000024123)	ENSORLG00000025484	ENSORLG00000029859	zbtb26 (ENSORLG00000015695) #22	p2rx4b (ENSORLG00000015741)	gucd1 (ENSORLG00000015750)	upb1 (ENSORLG00000015770)	adora2aa (ENSORLG00000025983)	specc1la (ENSORLG00000015790)	ENSORLG00000015799	ift81 (ENSORLG00000015815)	ENSORLG00000015888	anapc7 (ENSORLG00000015911)	ENSORLG00000029278	rad9b (ENSORLG00000024841)	pptc7a (ENSORLG00000015939)	ENSORLG00000015948	myl2b (ENSORLG00000015964)	CUX2 (ENSORLG00000015973)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Climbing perch	MODERN SPECIES	22	ENSATEG00000028566	zgc:65851 (ENSATEG00000014687)	cds2 (ENSATEG00000014657)	ENSATEG00000014647	bmp10 (ENSATEG00000014644)	ENSATEG00000014641	ENSATEG00000014619	ENSATEG00000014611	ENSATEG00000014593	ENSATEG00000014578	ENSATEG00000014547	ENSATEG00000014510	ENSATEG00000027975	ENSATEG00000028793	ENSATEG00000014364	ENSATEG00000014361 #22	ENSATEG00000014284	ENSATEG00000014181	gucd1 (ENSATEG00000014160)	upb1 (ENSATEG00000014114)	adora2aa (ENSATEG00000014104)	specc1la (ENSATEG00000014060)	ENSATEG00000014044	si:dkey-91m11.5 (ENSATEG00000013988)	ENSATEG00000013815	ENSATEG00000013767	ENSATEG00000013754	ENSATEG00000013745	rad9b (ENSATEG00000026109)	pptc7a (ENSATEG00000013725)	ENSATEG00000013678
Siamese fighting fish	MODERN SPECIES	20	snrnp27 (ENSBSLG00000010236)	MXD1 (ENSBSLG00000010233)	zgc:65851 (ENSBSLG00000010227)	cds2 (ENSBSLG00000009967)	arhgap25 (ENSBSLG00000009911)	bmp10 (ENSBSLG00000009907)	ERLIN2 (ENSBSLG00000009075)	znf703 (ENSBSLG00000008915)	TIA1 (ENSBSLG00000008276)	ENSBSLG00000017288	ENSBSLG00000017049	smad2 (ENSBSLG00000016731)	IER3IP1 (ENSBSLG00000016588)	ENSBSLG00000015861	ENSBSLG00000015820	zbtb26 (ENSBSLG00000015816) #22	p2rx4b (ENSBSLG00000015651)	gucd1 (ENSBSLG00000015621)	upb1 (ENSBSLG00000015584)	adora2aa (ENSBSLG00000015575)	specc1la (ENSBSLG00000015410)	ift81 (ENSBSLG00000014857)	ENSBSLG00000014780	anapc7 (ENSBSLG00000014734)	ENSBSLG00000014628	rad9b (ENSBSLG00000014620)	pptc7a (ENSBSLG00000014615)	PPP1CA (ENSBSLG00000014565)	myl2b (ENSBSLG00000014539)	CUX2 (ENSBSLG00000014450)	mtmr3 (ENSBSLG00000013939)
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000020618	zgc:65851 (ENSMAMG00000020614)	cds2 (ENSMAMG00000020602)	ENSMAMG00000020599	bmp10 (ENSMAMG00000026256)	ENSMAMG00000025210	ENSMAMG00000020586	ENSMAMG00000020582	ENSMAMG00000020575	ENSMAMG00000020566	ENSMAMG00000020550	ENSMAMG00000020505	ENSMAMG00000020535	ENSMAMG00000020527	ENSMAMG00000020481	ENSMAMG00000024769 #22	ENSMAMG00000020466	gucd1 (ENSMAMG00000020462)	upb1 (ENSMAMG00000020451)	adora2aa (ENSMAMG00000020444)	specc1la (ENSMAMG00000020436)	ENSMAMG00000020430	si:dkey-91m11.5 (ENSMAMG00000020415)	ENSMAMG00000020393	ENSMAMG00000020368	ENSMAMG00000020351	ENSMAMG00000020346	ENSMAMG00000020341	pptc7a (ENSMAMG00000020333)	ENSMAMG00000020330	myl2b (ENSMAMG00000020322)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Greater amberjack	MODERN SPECIES	6	MXD1 (ENSSDUG00000003240)	zgc:65851 (ENSSDUG00000003252)	cds2 (ENSSDUG00000003275)	arhgap25 (ENSSDUG00000003317)	bmp10 (ENSSDUG00000003333)	ENSSDUG00000003356	ERLIN2 (ENSSDUG00000003402)	znf703 (ENSSDUG00000003434)	TIA1 (ENSSDUG00000003453)	ENSSDUG00000003508	ENSSDUG00000003580	smad2 (ENSSDUG00000003668)	IER3IP1 (ENSSDUG00000003735)	ENSSDUG00000003748	ENSSDUG00000003754	zbtb26 (ENSSDUG00000003767) #22	p2rx4b (ENSSDUG00000003787)	gucd1 (ENSSDUG00000003890)	upb1 (ENSSDUG00000003906)	adora2aa (ENSSDUG00000003946)	specc1la (ENSSDUG00000003961)	ENSSDUG00000003998	si:dkey-91m11.5 (ENSSDUG00000004015)	ift81 (ENSSDUG00000004083)	ATP2A1 (ENSSDUG00000004172)	anapc7 (ENSSDUG00000004264)	ENSSDUG00000004303	ENSSDUG00000004324	rad9b (ENSSDUG00000004341)	pptc7a (ENSSDUG00000004359)	PPP1CA (ENSSDUG00000004376)
Yellowtail amberjack	MODERN SPECIES	3287	MXD1 (ENSSLDG00000014776)	zgc:65851 (ENSSLDG00000014769)	cds2 (ENSSLDG00000014746)	arhgap25 (ENSSLDG00000014727)	bmp10 (ENSSLDG00000014718)	ENSSLDG00000014710	ERLIN2 (ENSSLDG00000014675)	znf703 (ENSSLDG00000014662)	TIA1 (ENSSLDG00000014625)	ENSSLDG00000014582	ENSSLDG00000014500	smad2 (ENSSLDG00000014460)	IER3IP1 (ENSSLDG00000014439)	ENSSLDG00000014429	ENSSLDG00000014406	zbtb26 (ENSSLDG00000014390) #22	p2rx4b (ENSSLDG00000014300)	gucd1 (ENSSLDG00000014263)	upb1 (ENSSLDG00000014229)	adora2aa (ENSSLDG00000014206)	specc1la (ENSSLDG00000014158)	si:dkey-91m11.5 (ENSSLDG00000014110)	ift81 (ENSSLDG00000014065)	ATP2A1 (ENSSLDG00000013988)	anapc7 (ENSSLDG00000013930)	ENSSLDG00000013909	ENSSLDG00000013897	ENSSLDG00000013885	ENSSLDG00000013873	pptc7a (ENSSLDG00000013835)	PPP1CA (ENSSLDG00000013802)
Barramundi perch	MODERN SPECIES	95	MXD1 (ENSLCAG00010016360)	zgc:65851 (ENSLCAG00010016356)	cds2 (ENSLCAG00010016059)	arhgap25 (ENSLCAG00010015961)	bmp10 (ENSLCAG00010015960)	ENSLCAG00010015957	ERLIN2 (ENSLCAG00010015624)	znf703 (ENSLCAG00010015566)	ENSLCAG00010015547	ENSLCAG00010015531	ENSLCAG00010015517	smad2 (ENSLCAG00010015487)	IER3IP1 (ENSLCAG00010015476)	ENSLCAG00010015470	ENSLCAG00010015465	zbtb26 (ENSLCAG00010015462) #22	p2rx4b (ENSLCAG00010027958)	gucd1 (ENSLCAG00010027956)	upb1 (ENSLCAG00010027949)	adora2aa (ENSLCAG00010027946)	specc1la (ENSLCAG00010027943)	ENSLCAG00010027941	si:dkey-91m11.5 (ENSLCAG00010027879)	ift81 (ENSLCAG00010027815)	ENSLCAG00010027791	anapc7 (ENSLCAG00010027774)	ENSLCAG00010027772	ENSLCAG00010027771	rad9b (ENSLCAG00010027770)	pptc7a (ENSLCAG00010027769)	PPP1CA (ENSLCAG00010027768)
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00940000179994	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D.f	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Turbot	MODERN SPECIES	21	ENSSMAG00000020061	zgc:65851 (ENSSMAG00000020070)	cds2 (ENSSMAG00000020076)	ENSSMAG00000020091	bmp10 (ENSSMAG00000020110)	ENSSMAG00000020120	ENSSMAG00000022467	ENSSMAG00000020220	ENSSMAG00000020230	ENSSMAG00000000109	ENSSMAG00000000118	ENSSMAG00000000128	ENSSMAG00000000142	ENSSMAG00000000144	ENSSMAG00000000150	ENSSMAG00000000196 #22	ENSSMAG00000000202	gucd1 (ENSSMAG00000000213)	upb1 (ENSSMAG00000000217)	ENSSMAG00000026273	adora2aa (ENSSMAG00000001184)	specc1la (ENSSMAG00000001150)	si:dkey-91m11.5 (ENSSMAG00000001077)	ENSSMAG00000037685	ENSSMAG00000001055	ENSSMAG00000001001	ENSSMAG00000000971	ENSSMAG00000000938	ENSSMAG00000000914	rad9b (ENSSMAG00000000855)	pptc7a (ENSSMAG00000024284)
Tongue sole	MODERN SPECIES	398	MXD1 (ENSCSEG00000009887)	zgc:65851 (ENSCSEG00000009895)	cds2 (ENSCSEG00000009902)	arhgap25 (ENSCSEG00000009923)	bmp10 (ENSCSEG00000009939)	ENSCSEG00000009944	ERLIN2 (ENSCSEG00000009950)	znf703 (ENSCSEG00000010000)	TIA1 (ENSCSEG00000010018)	rchy1 (ENSCSEG00000010033)	ENSCSEG00000010057	smad2 (ENSCSEG00000010075)	ENSCSEG00000010086	ENSCSEG00000010097	ENSCSEG00000010103	zbtb26 (ENSCSEG00000010150) #22	gucd1 (ENSCSEG00000010153)	upb1 (ENSCSEG00000010170)	si:dkey-91m11.5 (ENSCSEG00000010207)	specc1la (ENSCSEG00000010230)	adora2aa (ENSCSEG00000010259)	ift81 (ENSCSEG00000010269)	PPP1CA (ENSCSEG00000010307)	ENSCSEG00000010324	anapc7 (ENSCSEG00000010399)	ENSCSEG00000010426	ENSCSEG00000010435	ENSCSEG00000010443	pptc7a (ENSCSEG00000010462)	myl2b (ENSCSEG00000010465)	ENSCSEG00000010481
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00390000008853	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999.m	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b.j	ENSGT00940000155578.e.a	ENSGT00940000160241
Tetraodon	MODERN SPECIES	3	figla (ENSTNIG00000016773)	add2 (ENSTNIG00000016774)	snrnp27 (ENSTNIG00000016775)	MXD1 (ENSTNIG00000000414)	cds2 (ENSTNIG00000011427)	arhgap25 (ENSTNIG00000011428)	bmp10 (ENSTNIG00000011429)	ENSTNIG00000011430	ERLIN2 (ENSTNIG00000011431)	znf703 (ENSTNIG00000011432)	ENSTNIG00000011433	rchy1 (ENSTNIG00000011434)	ENSTNIG00000011435	smad2 (ENSTNIG00000011436)	ENSTNIG00000011437	zbtb26 (ENSTNIG00000011438) #22	p2rx4b (ENSTNIG00000011439)	gucd1 (ENSTNIG00000011440)	upb1 (ENSTNIG00000011441)	adora2aa (ENSTNIG00000011442)	specc1la (ENSTNIG00000011443)	si:dkey-91m11.5 (ENSTNIG00000011444)	ift81 (ENSTNIG00000011445)	ENSTNIG00000011446	anapc7 (ENSTNIG00000011447)	ENSTNIG00000011448	ENSTNIG00000011449	pptc7a (ENSTNIG00000011450)	ENSTNIG00000011451	myl2b (ENSTNIG00000011452)	CUX2 (ENSTNIG00000011453)
Fugu	MODERN SPECIES	13	MXD1 (ENSTRUG00000027715)	zgc:65851 (ENSTRUG00000014904)	cds2 (ENSTRUG00000014941)	arhgap25 (ENSTRUG00000014999)	bmp10 (ENSTRUG00000020938)	ENSTRUG00000024141	ERLIN2 (ENSTRUG00000021046)	znf703 (ENSTRUG00000015121)	TIA1 (ENSTRUG00000015136)	rchy1 (ENSTRUG00000015210)	ENSTRUG00000020510	smad2 (ENSTRUG00000015216)	ENSTRUG00000015252	ENSTRUG00000033477	ENSTRUG00000015259	zbtb26 (ENSTRUG00000024078) #22	p2rx4b (ENSTRUG00000015294)	gucd1 (ENSTRUG00000020017)	ADORA2A (ENSTRUG00000029459)	si:dkey-91m11.5 (ENSTRUG00000015467)	ift81 (ENSTRUG00000015580)	ENSTRUG00000015616	anapc7 (ENSTRUG00000015749)	ENSTRUG00000022600	rad9b (ENSTRUG00000021895)	pptc7a (ENSTRUG00000020310)	PPP1CA (ENSTRUG00000015811)	myl2b (ENSTRUG00000015827)	CUX2 (ENSTRUG00000015853)	mtmr3 (ENSTRUG00000015907)	BICDL1 (ENSTRUG00000016033)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Ballan wrasse	MODERN SPECIES	87	MXD1 (ENSLBEG00000000032)	zgc:65851 (ENSLBEG00000000038)	cds2 (ENSLBEG00000000041)	arhgap25 (ENSLBEG00000000055)	bmp10 (ENSLBEG00000000065)	ENSLBEG00000000080	ERLIN2 (ENSLBEG00000000087)	znf703 (ENSLBEG00000000104)	ENSLBEG00000000110	ENSLBEG00000000122	ENSLBEG00000000157	ENSLBEG00000000190	smad2 (ENSLBEG00000000249)	IER3IP1 (ENSLBEG00000000278)	ENSLBEG00000000293	zbtb26 (ENSLBEG00000000418) #22	p2rx4b (ENSLBEG00000000446)	gucd1 (ENSLBEG00000000512)	upb1 (ENSLBEG00000000563)	adora2aa (ENSLBEG00000000613)	specc1la (ENSLBEG00000000644)	si:dkey-91m11.5 (ENSLBEG00000000698)	ift81 (ENSLBEG00000000788)	ENSLBEG00000000854	ENSLBEG00000000927	BICDL1 (ENSLBEG00000000956)	CIT (ENSLBEG00000001001)	mtmr3 (ENSLBEG00000001129)	CUX2 (ENSLBEG00000001200)	PPP1CA (ENSLBEG00000001314)	pptc7a (ENSLBEG00000001355)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Perciformes	DUPLICATION
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	23	smad2 (ENSCGOG00000018880)	ENSCGOG00000018867	ENSCGOG00000018131	ENSCGOG00000018079	ENSCGOG00000018059	smad2 (ENSCGOG00000017950)	ENSCGOG00000017941	ENSCGOG00000017940	ENSCGOG00000017939	ENSCGOG00000017934	zbtb26 (ENSCGOG00000017933) #22	ENSCGOG00000017931	zbtb26 (ENSCGOG00000017930) #22	zbtb26 (ENSCGOG00000017927) #22	ENSCGOG00000017900	zbtb26 (ENSCGOG00000017895) #22	p2rx4b (ENSCGOG00000017765)	gucd1 (ENSCGOG00000017761)	specc1la (ENSCGOG00000017753)	ENSCGOG00000017750	si:dkey-91m11.5 (ENSCGOG00000015636)	ift81 (ENSCGOG00000015285)	ENSCGOG00000008248	anapc7 (ENSCGOG00000007996)	ENSCGOG00000007980	ENSCGOG00000007975	rad9b (ENSCGOG00000007971)	pptc7a (ENSCGOG00000007962)	PPP1CA (ENSCGOG00000007322)	myl2b (ENSCGOG00000007224)	ENSCGOG00000007220
Channel bull blenny	MODERN SPECIES	23	ERLIN2 (ENSCGOG00000018995)	znf703 (ENSCGOG00000018971)	rchy1 (ENSCGOG00000018970)	ENSCGOG00000018969	ENSCGOG00000018967	smad2 (ENSCGOG00000018880)	ENSCGOG00000018867	ENSCGOG00000018131	ENSCGOG00000018079	ENSCGOG00000018059	smad2 (ENSCGOG00000017950)	ENSCGOG00000017941	ENSCGOG00000017940	ENSCGOG00000017939	ENSCGOG00000017934	zbtb26 (ENSCGOG00000017933) #22	ENSCGOG00000017931	zbtb26 (ENSCGOG00000017930) #22	zbtb26 (ENSCGOG00000017927) #22	ENSCGOG00000017900	zbtb26 (ENSCGOG00000017895) #22	p2rx4b (ENSCGOG00000017765)	gucd1 (ENSCGOG00000017761)	specc1la (ENSCGOG00000017753)	ENSCGOG00000017750	si:dkey-91m11.5 (ENSCGOG00000015636)	ift81 (ENSCGOG00000015285)	ENSCGOG00000008248	anapc7 (ENSCGOG00000007996)	ENSCGOG00000007980	ENSCGOG00000007975
Channel bull blenny	MODERN SPECIES	23	rchy1 (ENSCGOG00000018970)	ENSCGOG00000018969	ENSCGOG00000018967	smad2 (ENSCGOG00000018880)	ENSCGOG00000018867	ENSCGOG00000018131	ENSCGOG00000018079	ENSCGOG00000018059	smad2 (ENSCGOG00000017950)	ENSCGOG00000017941	ENSCGOG00000017940	ENSCGOG00000017939	ENSCGOG00000017934	zbtb26 (ENSCGOG00000017933) #22	ENSCGOG00000017931	zbtb26 (ENSCGOG00000017930) #22	zbtb26 (ENSCGOG00000017927) #22	ENSCGOG00000017900	zbtb26 (ENSCGOG00000017895) #22	p2rx4b (ENSCGOG00000017765)	gucd1 (ENSCGOG00000017761)	specc1la (ENSCGOG00000017753)	ENSCGOG00000017750	si:dkey-91m11.5 (ENSCGOG00000015636)	ift81 (ENSCGOG00000015285)	ENSCGOG00000008248	anapc7 (ENSCGOG00000007996)	ENSCGOG00000007980	ENSCGOG00000007975	rad9b (ENSCGOG00000007971)	pptc7a (ENSCGOG00000007962)
Pike perch	MODERN SPECIES	16	snrnp27 (ENSSLUG00000018084)	ENSSLUG00000018088	zgc:65851 (ENSSLUG00000018093)	cds2 (ENSSLUG00000018129)	ENSSLUG00000018640	bmp10 (ENSSLUG00000018654)	ENSSLUG00000018680	ERLIN2 (ENSSLUG00000018725)	znf703 (ENSSLUG00000019057)	TIA1 (ENSSLUG00000019077)	ENSSLUG00000019111	ENSSLUG00000019126	smad2 (ENSSLUG00000019315)	ENSSLUG00000019330	ENSSLUG00000019335	zbtb26 (ENSSLUG00000019338) #22	p2rx4b (ENSSLUG00000019342)	gucd1 (ENSSLUG00000019351)	p2rx4b (ENSSLUG00000019367)	gucd1 (ENSSLUG00000019429)	upb1 (ENSSLUG00000019441)	ENSSLUG00000019464	mrps28 (ENSSLUG00000019467)	brd3b (ENSSLUG00000019473)	aplnra (ENSSLUG00000019480)	ENSSLUG00000019482	TBC1D10A (ENSSLUG00000019487)	sf3a1 (ENSSLUG00000019502)	ENSSLUG00000019551	ENSSLUG00000019552	slc7a4 (ENSSLUG00000019555)
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000159895	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b	ENSGT00940000153472.a.b	ENSGT00940000155578.e.a
Lumpfish	MODERN SPECIES	24	zgc:65851 (ENSCLMG00005018327)	cds2 (ENSCLMG00005017925)	arhgap25 (ENSCLMG00005017919)	bmp10 (ENSCLMG00005017918)	ENSCLMG00005017904	ERLIN2 (ENSCLMG00005017886)	ENSCLMG00005017885	znf703 (ENSCLMG00005017884)	TIA1 (ENSCLMG00005017873)	ENSCLMG00005017872	ENSCLMG00005017866	smad2 (ENSCLMG00005017577)	IER3IP1 (ENSCLMG00005017575)	ENSCLMG00005017574	ENSCLMG00005017573	zbtb26 (ENSCLMG00005017572) #22	gucd1 (ENSCLMG00005017571)	upb1 (ENSCLMG00005017551)	adora2aa (ENSCLMG00005017534)	specc1la (ENSCLMG00005017215)	ENSCLMG00005017210	si:dkey-91m11.5 (ENSCLMG00005013609)	ift81 (ENSCLMG00005013585)	ENSCLMG00005009304	anapc7 (ENSCLMG00005009289)	ENSCLMG00005009287	ENSCLMG00005009285	ENSCLMG00005009284	pptc7a (ENSCLMG00005009282)	PPP1CA (ENSCLMG00005009281)	myl2b (ENSCLMG00005009264)
Stickleback	MODERN SPECIES	12	arhgap25 (ENSGACG00000013273)	bmp10 (ENSGACG00000013276)	ENSGACG00000013278	ENSGACG00000013280	ERLIN2 (ENSGACG00000013283)	znf703 (ENSGACG00000013291)	TIA1 (ENSGACG00000013294)	rchy1 (ENSGACG00000013302)	ENSGACG00000013314	ENSGACG00000013316	smad2 (ENSGACG00000013323)	ENSGACG00000013334	ENSGACG00000013338	ENSGACG00000013341	specc1la (ENSGACG00000013410)	zbtb26 (ENSGACG00000013351) #22	p2rx4b (ENSGACG00000013355)	gucd1 (ENSGACG00000013382)	upb1 (ENSGACG00000013386)	adora2aa (ENSGACG00000013408)	si:dkey-91m11.5 (ENSGACG00000013417)	ift81 (ENSGACG00000013431)	ATP2A1 (ENSGACG00000013436)	anapc7 (ENSGACG00000013441)	ENSGACG00000013448	rad9b (ENSGACG00000013463)	pptc7a (ENSGACG00000013469)	PPP1CA (ENSGACG00000013477)	myl2b (ENSGACG00000013491)	CUX2 (ENSGACG00000013522)	mtmr3 (ENSGACG00000013531)
Perciformes	ANCESTRAL SPECIES																	ENSGT00940000157920.a.b #22
Perciformes_a	ANCESTRAL SPECIES																	ENSGT00940000157920.a.b #22
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000018969	ENSCGOG00000018967	smad2 (ENSCGOG00000018880)	ENSCGOG00000018867	ENSCGOG00000018131	ENSCGOG00000018079	ENSCGOG00000018059	smad2 (ENSCGOG00000017950)	ENSCGOG00000017941	ENSCGOG00000017940	ENSCGOG00000017939	ENSCGOG00000017934	zbtb26 (ENSCGOG00000017933) #22	ENSCGOG00000017931	zbtb26 (ENSCGOG00000017930) #22	zbtb26 (ENSCGOG00000017927) #22	ENSCGOG00000017900	zbtb26 (ENSCGOG00000017895) #22	p2rx4b (ENSCGOG00000017765)	gucd1 (ENSCGOG00000017761)	specc1la (ENSCGOG00000017753)	ENSCGOG00000017750	si:dkey-91m11.5 (ENSCGOG00000015636)	ift81 (ENSCGOG00000015285)	ENSCGOG00000008248	anapc7 (ENSCGOG00000007996)	ENSCGOG00000007980	ENSCGOG00000007975	rad9b (ENSCGOG00000007971)	pptc7a (ENSCGOG00000007962)	PPP1CA (ENSCGOG00000007322)
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT00940000165184	ENSGT00940000162544.c.b	ENSGT00940000153499.b.a	ENSGT00510000047648.b.a	ENSGT00940000175330	ENSGT00390000013892	ENSGT00940000157920.a #22	ENSGT01020000230351.D.a.a.a	ENSGT00390000000571	ENSGT00390000004906.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00940000153592.B.b.a.a	ENSGT00940000179994	ENSGT00940000153491.b.a.l	ENSGT00390000000999	ENSGT00940000155668.i.b	ENSGT00950000182950.D	ENSGT00940000165298.a.b	ENSGT01050000245010	ENSGT00390000005767.b	ENSGT00390000011937.g.b
European seabass	MODERN SPECIES	13	add2 (ENSDLAG00005006286)	zgc:65851 (ENSDLAG00005006470)	cds2 (ENSDLAG00005009665)	ENSDLAG00005006474	bmp10 (ENSDLAG00005030781)	ENSDLAG00005028068	ENSDLAG00005006526	ENSDLAG00005006774	ENSDLAG00005006784	ENSDLAG00005007097	ENSDLAG00005007213	ENSDLAG00005007410	ENSDLAG00005007539	ENSDLAG00005007547	ENSDLAG00005007553	ENSDLAG00005035126 #22	ENSDLAG00005007587	upb1 (ENSDLAG00005007811)	ENSDLAG00005007874	ENSDLAG00005007919	si:dkey-91m11.5 (ENSDLAG00005008329)	ENSDLAG00005009302	ENSDLAG00005009315	ENSDLAG00005009435	ENSDLAG00005031210	ENSDLAG00005010657	rad9b (ENSDLAG00005033090)	ENSDLAG00005010713	myl2b (ENSDLAG00005010816)	ENSDLAG00005034770	ENSDLAG00005010848
Large yellow croaker	MODERN SPECIES	2	add2 (ENSLCRG00005023298)	snrnp27 (ENSLCRG00005023297)	ENSLCRG00005023296	zgc:65851 (ENSLCRG00005023295)	cds2 (ENSLCRG00005023222)	arhgap25 (ENSLCRG00005023203)	bmp10 (ENSLCRG00005023201)	ERLIN2 (ENSLCRG00005023174)	znf703 (ENSLCRG00005023172)	TIA1 (ENSLCRG00005023090)	ENSLCRG00005023068	ENSLCRG00005023045	smad2 (ENSLCRG00005023035)	IER3IP1 (ENSLCRG00005023032)	ENSLCRG00005023025	zbtb26 (ENSLCRG00005023022) #22	p2rx4b (ENSLCRG00005023018)	gucd1 (ENSLCRG00005023015)	upb1 (ENSLCRG00005023014)	ENSLCRG00005023012	adora2aa (ENSLCRG00005023011)	specc1la (ENSLCRG00005022996)	ENSLCRG00005022992	si:dkey-91m11.5 (ENSLCRG00005022371)	ift81 (ENSLCRG00005022274)	ENSLCRG00005021817	anapc7 (ENSLCRG00005021807)	ENSLCRG00005021803	ENSLCRG00005021798	rad9b (ENSLCRG00005021796)	pptc7a (ENSLCRG00005021794)
Gilthead seabream	MODERN SPECIES	19	MXD1 (ENSSAUG00010022086)	zgc:65851 (ENSSAUG00010022068)	cds2 (ENSSAUG00010022057)	arhgap25 (ENSSAUG00010022052)	bmp10 (ENSSAUG00010022051)	ENSSAUG00010022050	ERLIN2 (ENSSAUG00010022035)	znf703 (ENSSAUG00010022034)	ENSSAUG00010022027	ENSSAUG00010021829	ENSSAUG00010021790	smad2 (ENSSAUG00010021762)	IER3IP1 (ENSSAUG00010021755)	ENSSAUG00010021754	ENSSAUG00010021749	zbtb26 (ENSSAUG00010021746) #22	p2rx4b (ENSSAUG00010021167)	gucd1 (ENSSAUG00010021159)	upb1 (ENSSAUG00010021158)	adora2aa (ENSSAUG00010021157)	specc1la (ENSSAUG00010021153)	ENSSAUG00010021145	si:dkey-91m11.5 (ENSSAUG00010018567)	ift81 (ENSSAUG00010018520)	ENSSAUG00010013429	DDHD2 (ENSSAUG00010013280)	ENSSAUG00010013276	srrd (ENSSAUG00010013275)	tfip11 (ENSSAUG00010013272)	thoc5 (ENSSAUG00010013232)	ENSSAUG00010013228
Pinecone sodierfish	MODERN SPECIES	23	MXD1 (ENSMMDG00005023425)	zgc:65851 (ENSMMDG00005023430)	cds2 (ENSMMDG00005023448)	arhgap25 (ENSMMDG00005023523)	bmp10 (ENSMMDG00005023527)	ENSMMDG00005023528	ERLIN2 (ENSMMDG00005023537)	znf703 (ENSMMDG00005023555)	ENSMMDG00005023559	ENSMMDG00005023568	ENSMMDG00005023571	smad2 (ENSMMDG00005023574)	ENSMMDG00005023577	ENSMMDG00005000451	ENSMMDG00005000456	zbtb26 (ENSMMDG00005000459) #22	p2rx4b (ENSMMDG00005000502)	gucd1 (ENSMMDG00005000678)	upb1 (ENSMMDG00005000695)	ENSMMDG00005000717	adora2aa (ENSMMDG00005000720)	specc1la (ENSMMDG00005000733)	ENSMMDG00005000780	si:dkey-91m11.5 (ENSMMDG00005000871)	ift81 (ENSMMDG00005007342)	ENSMMDG00005007394	anapc7 (ENSMMDG00005011727)	ENSMMDG00005011740	ENSMMDG00005011745	ENSMMDG00005011747	pptc7a (ENSMMDG00005011750)
Cod	MODERN SPECIES	19	ENSGMOG00000027229	ENSGMOG00000028777	ewsr1b (ENSGMOG00000012263)	ENSGMOG00000024604	ENSGMOG00000025569	ENSGMOG00000034351	ENSGMOG00000011675	ENSGMOG00000033601	TCTN2 (ENSGMOG00000029786)	ENSGMOG00000008927	DNAH10 (ENSGMOG00000008878)	ENSGMOG00000027219	ENSGMOG00000008853	ENSGMOG00000029527	ENSGMOG00000002759	ENSGMOG00000034101 #22	ENSGMOG00000002827	gucd1 (ENSGMOG00000002864)	upb1 (ENSGMOG00000002878)	ENSGMOG00000030313	adora2aa (ENSGMOG00000002899)	specc1la (ENSGMOG00000002918)	si:dkey-91m11.5 (ENSGMOG00000002945)	ENSGMOG00000003015	ENSGMOG00000003047	ENSGMOG00000003084	ENSGMOG00000014420	ENSGMOG00000003113	suds3 (ENSGMOG00000011633)	TAOK3 (ENSGMOG00000011618)	pebp1 (ENSGMOG00000011617)
Protacanthopterygii	ANCESTRAL SPECIES	172	ENSGT00940000166440	ENSGT00940000164772	ENSGT00940000159652	ENSGT00940000156002.a.b	ENSGT00940000155275.c.b.b	ENSGT00940000155422.bb	ENSGT00940000159838	ENSGT00940000157157.b.a.a	ENSGT00940000158199	ENSGT00940000156724	ENSGT00940000167162	ENSGT00390000010743.b.b #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000165787.a.b	ENSGT00940000157920.a #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	122									ENSGT00940000158199.k	ENSGT00940000156724.l	ENSGT00940000156511.b.kb.a.a	ENSGT00390000010743.b.b.c #27	ENSGT00940000156868.h.c #30	ENSGT00950000182969.A.a.a.a	ENSGT00940000165787.a.b.db	ENSGT00940000157920.a.c #22	ENSGT00940000163543.a.d	ENSGT00940000154687.B.q.b.a.b #20	ENSGT00730000111240	ENSGT00950000182888.a.b	ENSGT00390000004247.l.a	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.b.b	ENSGT00940000159387.e.f	ENSGT00940000159447.n	ENSGT00940000160710.h	ENSGT00390000004550	ENSGT00940000158795.i	ENSGT00940000174697	ENSGT00940000155640.a	ENSGT00940000164450.a
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT01080000257442.d	ENSGT00940000159652.j	ENSGT00940000156002.a.b.lb.a	ENSGT00940000155275.c.b.b.f	ENSGT00940000166112.h	ENSGT00940000155422.bb.a	ENSGT00940000159838	ENSGT00940000157157.b.a.a.f	ENSGT00940000158199.k	ENSGT00940000156724.l	ENSGT00940000156511.b.kb.a.a	ENSGT00390000010743.b.b.c #27	ENSGT00940000156868.h.c #30	ENSGT00950000182969.A.a.a.a	ENSGT00940000165787.a.b.db	ENSGT00940000157920.a.c #22	ENSGT00940000163543.a.d	ENSGT00940000154687.B.q.b.a.b #20	ENSGT00730000111240	ENSGT00950000182888.a.b	ENSGT00390000004247.l.a	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.b.b	ENSGT00940000159387.e.f	ENSGT00940000159447.n	ENSGT00940000160710.h	ENSGT00390000004550	ENSGT00940000158795.i	ENSGT00940000174697	ENSGT00940000155640.a	ENSGT00940000164450.a
Oncorhynchus	ANCESTRAL SPECIES		ENSGT01080000257442.c.a	ENSGT01080000257442.d	ENSGT00940000159652.j	ENSGT00940000156002.a.b.lb.a	ENSGT00940000155275.c.b.b.f	ENSGT00940000155422.bb.a	ENSGT00940000159838	ENSGT00940000157157.b.a.a.f	ENSGT00940000158199.k	ENSGT00940000156724.l	ENSGT00390000010743.b.b.c #27	ENSGT00940000156868.h.c #30	ENSGT00950000182969.A.a.a.a	ENSGT00940000165787.a.b.db.a.b	ENSGT00940000165787.a.b.db.a.a	ENSGT00940000157920.a.c #22	ENSGT00940000163543.a.d	ENSGT00940000154687.B.q.b.a.b #20	ENSGT00730000111240	ENSGT00950000182888.a.b	ENSGT00390000004247.l.a	ENSGT00400000024875.c.b.a	ENSGT00400000024875.c.a.b.b	ENSGT00940000159387.e.f	ENSGT00940000159447.n	ENSGT00940000160710.h	ENSGT00390000004550	ENSGT00940000158795.i	ENSGT00940000155640.a	ENSGT00940000164450.a	ENSGT00390000017970.d.a
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT01080000257442.d	ENSGT00940000159652.j	ENSGT00940000156002.a.b.lb.a	ENSGT00940000155275.c.b.b.f	ENSGT00940000166112.h	ENSGT00940000155422.bb.a	ENSGT00940000159838	ENSGT00940000157157.b.a.a.f	ENSGT00940000158199.k	ENSGT00940000156724.l	ENSGT00390000010743.b.b.c #27	ENSGT00940000156868.h.c #30	ENSGT00950000182969.A.a.a.a	ENSGT00940000165787.a.b.db.a.b	ENSGT00940000165787.a.b.db.a.a	ENSGT00940000157920.a.c #22	ENSGT00940000163543.a.d	ENSGT00940000154687.B.q.b.a.b #20	ENSGT00730000111240	ENSGT00950000182888.a.b	ENSGT00390000004247.l.a	ENSGT00400000024875.c.b.a	ENSGT00400000024875.c.a.b.b	ENSGT00940000159387.e.f	ENSGT00940000159447.n	ENSGT00940000160710.h	ENSGT00390000004550	ENSGT00940000158795.i	ENSGT00940000155640.a	ENSGT00940000164450.a	ENSGT00390000017970.d.a
Coho salmon	MODERN SPECIES	22	ENSOKIG00005033359	ehmt1a (ENSOKIG00005028420)	cacna1ba (ENSOKIG00005003648)	ENSOKIG00005002302	ENSOKIG00005002293	man1b1b (ENSOKIG00005002275)	dpp7 (ENSOKIG00005002064)	NOTCH1 (ENSOKIG00005000726)	inpp5e (ENSOKIG00005000060)	pmpca (ENSOKIG00005024063)	PTGS1 (ENSOKIG00005022764) #27	LHX6 (ENSOKIG00005022577) #30	krt1-c5 (ENSOKIG00005022530)	ENSOKIG00005022516	ENSOKIG00005022512	zbtb26 (ENSOKIG00005022508) #22	GPR21 (ENSOKIG00005022494)	ENSOKIG00005022446 #20	cfap157 (ENSOKIG00005022420)	tor2a (ENSOKIG00005022411)	ptrh1 (ENSOKIG00005022401)	ENSOKIG00005022394	ENSOKIG00005022351	FAM163B (ENSOKIG00005022342)	ADAMTSL2 (ENSOKIG00005022204)	mymk (ENSOKIG00005022167)	ENSOKIG00005022141	slc2a8 (ENSOKIG00005022062)	lcn15 (ENSOKIG00005022047)	jak2b (ENSOKIG00005021260)	zgc:114041 (ENSOKIG00005021163)
Chinook salmon	MODERN SPECIES	41	ENSOTSG00005046519	ENSOTSG00005046520	ARRDC1 (ENSOTSG00005046521)	ehmt1a (ENSOTSG00005046527)	cacna1ba (ENSOTSG00005047430)	ENSOTSG00005047980	man1b1b (ENSOTSG00005047984)	dpp7 (ENSOTSG00005047986)	notch1b (ENSOTSG00005047988)	inpp5e (ENSOTSG00005047995)	pmpca (ENSOTSG00005047996)	PTGS1 (ENSOTSG00005047998) #27	LHX6 (ENSOTSG00005047999) #30	krt1-c5 (ENSOTSG00005048000)	ENSOTSG00005036448	zbtb26 (ENSOTSG00005036451) #22	GPR21 (ENSOTSG00005036510)	ENSOTSG00005036513 #20	cfap157 (ENSOTSG00005036591)	tor2a (ENSOTSG00005036592)	ptrh1 (ENSOTSG00005036594)	ENSOTSG00005036595	FAM163B (ENSOTSG00005036597)	ADAMTSL2 (ENSOTSG00005036598)	mymk (ENSOTSG00005036606)	ENSOTSG00005036609	slc2a8 (ENSOTSG00005036611)	lcn15 (ENSOTSG00005036634)	jak2b (ENSOTSG00005036647)	zgc:114041 (ENSOTSG00005037091)	gldc (ENSOTSG00005037099)
Rainbow trout	MODERN SPECIES	27	ARRDC1 (ENSOMYG00000045458)	ehmt1a (ENSOMYG00000043578)	cacna1ba (ENSOMYG00000018918)	man1b1b (ENSOMYG00000017764)	dpp7 (ENSOMYG00000017676)	ENSOMYG00000013769	inpp5e (ENSOMYG00000013328)	pmpca (ENSOMYG00000012088)	ENSOMYG00000068825	ENSOMYG00000009125 #27	ENSOMYG00000008013 #30	krt1-c5 (ENSOMYG00000008001)	ENSOMYG00000048704	ENSOMYG00000007975	ENSOMYG00000007966	zbtb26 (ENSOMYG00000007950) #22	ENSOMYG00000007941	ENSOMYG00000007651 #20	cfap157 (ENSOMYG00000007071)	ENSOMYG00000006904	ptrh1 (ENSOMYG00000006957)	ENSOMYG00000006932	FAM163B (ENSOMYG00000064671)	ENSOMYG00000006823	mymk (ENSOMYG00000062248)	ENSOMYG00000006664	slc2a8 (ENSOMYG00000006574)	lcn15 (ENSOMYG00000006411)	ENSOMYG00000065452	jak2b (ENSOMYG00000006066)	zgc:114041 (ENSOMYG00000005449)
Salmo	ANCESTRAL SPECIES		ENSGT00940000159652.j	ENSGT00940000156002.a.b.lb.a	ENSGT00940000155275.c.b.b.f	ENSGT00940000166112.h	ENSGT00940000155422.bb.a	ENSGT00940000159838	ENSGT00940000157157.b.a.a.f	ENSGT01100000264406.a	ENSGT00940000158199.k	ENSGT00940000156724.l	ENSGT00940000156511.b.kb.a.a	ENSGT00390000010743.b.b.c #27	ENSGT00940000156868.h.c #30	ENSGT00950000182969.A.a.a.a	ENSGT00940000165787.a.b.db.c	ENSGT00940000157920.a.c #22	ENSGT00940000163543.a.d	ENSGT00940000154687.B.q.b.a.b #20	ENSGT00730000111240	ENSGT00950000182888.a.b	ENSGT00390000004247.l.a	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.b.b	ENSGT00940000159387.e.f	ENSGT00940000159447.n	ENSGT00940000160710.h	ENSGT00390000004550	ENSGT00940000158795.i	ENSGT00940000174697	ENSGT00940000155640.a	ENSGT00940000164450.a
Atlantic salmon	MODERN SPECIES	16	ARRDC1 (ENSSSAG00000072523)	ehmt1a (ENSSSAG00000074046)	cacna1ba (ENSSSAG00000072846)	ENSSSAG00000092968	man1b1b (ENSSSAG00000052998)	dpp7 (ENSSSAG00000120719)	ENSSSAG00000053490	ENSSSAG00000110942	inpp5e (ENSSSAG00000065150)	pmpca (ENSSSAG00000007720)	ENSSSAG00000066986	ENSSSAG00000067020 #27	ENSSSAG00000067466 #30	krt1-c5 (ENSSSAG00000067470)	ENSSSAG00000067473	zbtb26 (ENSSSAG00000086063) #22	ENSSSAG00000067480	ENSSSAG00000067497 #20	cfap157 (ENSSSAG00000067531)	ENSSSAG00000106847	ptrh1 (ENSSSAG00000067542)	ENSSSAG00000067546	ENSSSAG00000122187	FAM163B (ENSSSAG00000108350)	ENSSSAG00000117977	ENSSSAG00000067560	mymk (ENSSSAG00000067591)	ENSSSAG00000067596	slc2a8 (ENSSSAG00000067601)	jak2b (ENSSSAG00000067739)	ENSSSAG00000107114
River trout	MODERN SPECIES	19	ehmt1a (ENSSTUG00000028064)	cacna1ba (ENSSTUG00000029587)	ENSSTUG00000039602	ENSSTUG00000039610	man1b1b (ENSSTUG00000039619)	dpp7 (ENSSTUG00000039633)	notch1b (ENSSTUG00000039930)	ENSSTUG00000043517	inpp5e (ENSSTUG00000043567)	pmpca (ENSSTUG00000043672)	PTGS1 (ENSSTUG00000044379) #27	LHX6 (ENSSTUG00000003470) #30	krt1-c5 (ENSSTUG00000003492)	ENSSTUG00000003525	ENSSTUG00000003531	zbtb26 (ENSSTUG00000003539) #22	GPR21 (ENSSTUG00000003543)	ENSSTUG00000003565 #20	cfap157 (ENSSTUG00000003637)	tor2a (ENSSTUG00000003647)	ptrh1 (ENSSTUG00000003657)	ENSSTUG00000003674	ENSSTUG00000003677	FAM163B (ENSSTUG00000003713)	ADAMTSL2 (ENSSTUG00000003722)	mymk (ENSSTUG00000003774)	ENSSTUG00000003819	slc2a8 (ENSSTUG00000003842)	ENSSTUG00000003918	jak2b (ENSSTUG00000004012)	zgc:114041 (ENSSTUG00000005039)
Huchen	MODERN SPECIES	151									inpp5e (ENSHHUG00000045045)	pmpca (ENSHHUG00000045089)	ENSHHUG00000045201	PTGS1 (ENSHHUG00000045209) #27	LHX6 (ENSHHUG00000045545) #30	krt1-c5 (ENSHHUG00000045549)	ENSHHUG00000045561	zbtb26 (ENSHHUG00000045562) #22	GPR21 (ENSHHUG00000045567)	cfap157 (ENSHHUG00000045570)	tor2a (ENSHHUG00000045581)	ptrh1 (ENSHHUG00000045594)	ENSHHUG00000045597	ENSHHUG00000045600	FAM163B (ENSHHUG00000045607)	ADAMTSL2 (ENSHHUG00000045609)	mymk (ENSHHUG00000045628)	ENSHHUG00000045638	slc2a8 (ENSHHUG00000045646)	lcn15 (ENSHHUG00000045657)	jak2b (ENSHHUG00000045676)	zgc:114041 (ENSHHUG00000045812)	gldc (ENSHHUG00000045820)
Salmoninae	ANCESTRAL SPECIES	350															ENSGT00940000165787.a.b.eb	ENSGT00940000157920.a.d #22	ENSGT00940000163543.a.c	ENSGT00940000154687.B.q.b.a.a #20	ENSGT00940000154130.a.b.f	ENSGT00390000004247.l.b	ENSGT00400000024875.c.a.b.a	ENSGT00940000159387.e.e	ENSGT00940000159447.m	ENSGT00940000160710.g	ENSGT00940000158795.j	ENSGT00390000017970.d.b	ENSGT01030000234564.a.a.b.b	ENSGT00940000153771.B.w	ENSGT00940000156411.od.b.b	ENSGT00950000182938.b.b.b.b.b.b.h.a.a	ENSGT00940000158944
Salmoninae_a	ANCESTRAL SPECIES	70	ENSGT00940000167390.c	ENSGT01100000263542.B.b.a.b.e	ENSGT00390000012665.j	ENSGT01080000257442.c.b	ENSGT00940000166440	ENSGT00940000156002.a.b.lb.b	ENSGT00940000155275.c.b.b.e	ENSGT00940000155422.bb.b	ENSGT00940000157157.b.a.a.e	ENSGT00940000158199.l	ENSGT00940000156724.k	ENSGT00390000010743.b.b.d #27	ENSGT00940000156868.h.d #30	ENSGT00950000182969.A.a.a.b	ENSGT00940000165787.a.b.eb	ENSGT00940000157920.a.d #22	ENSGT00940000163543.a.c	ENSGT00940000154687.B.q.b.a.a #20	ENSGT00940000154130.a.b.f	ENSGT00390000004247.l.b	ENSGT00400000024875.c.a.b.a	ENSGT00940000159387.e.e	ENSGT00940000159447.m	ENSGT00940000160710.g	ENSGT00940000158795.j	ENSGT00390000017970.d.b	ENSGT01030000234564.a.a.b.b	ENSGT00940000153771.B.w	ENSGT00940000156411.od.b.b	ENSGT00950000182938.b.b.b.b.b.b.h.a.a	ENSGT00940000158944
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00530000064286.c.a	ENSGT00940000167390.c	ENSGT01100000263542.B.b.a.b.e	ENSGT00390000012665.j	ENSGT01080000257442.c.b	ENSGT00940000166440	ENSGT00940000155275.c.b.b.e	ENSGT00940000155422.bb.b	ENSGT00940000157157.b.a.a.e	ENSGT00940000158199.l	ENSGT00940000156724.k	ENSGT00390000010743.b.b.d #27	ENSGT00940000156868.h.d #30	ENSGT00950000182969.A.a.a.b	ENSGT00940000165787.a.b.eb	ENSGT00940000157920.a.d #22	ENSGT00940000163543.a.c	ENSGT00940000154687.B.q.b.a.a #20	ENSGT00940000154130.a.b.f	ENSGT00390000004247.l.b	ENSGT00400000024875.c.b.b	ENSGT00400000024875.c.a.b.a	ENSGT00940000159387.e.e	ENSGT00940000159447.m	ENSGT00940000160710.g	ENSGT00940000158795.j	ENSGT00390000017970.d.b	ENSGT01030000234564.a.a.b.b	ENSGT00940000153771.B.w	ENSGT00940000156411.od.b.b	ENSGT00950000182938.b.b.b.b.b.b.h.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00530000064286.c.a	ENSGT00940000167390.c	ENSGT01100000263542.B.b.a.b.e	ENSGT00390000012665.j	ENSGT01080000257442.c.b	ENSGT00940000166440	ENSGT00940000155275.c.b.b.e	ENSGT00940000155422.bb.b	ENSGT00940000157157.b.a.a.e	ENSGT00940000158199.l	ENSGT00940000156724.k	ENSGT00390000010743.b.b.d #27	ENSGT00940000156868.h.d #30	ENSGT00950000182969.A.a.a.b	ENSGT00940000165787.a.b.eb	ENSGT00940000157920.a.d #22	ENSGT00940000163543.a.c	ENSGT00940000154687.B.q.b.a.a #20	ENSGT00940000154130.a.b.f	ENSGT00390000004247.l.b	ENSGT00400000024875.c.b.b	ENSGT00400000024875.c.a.b.a	ENSGT00940000159387.e.e	ENSGT00940000159447.m	ENSGT00940000160710.g	ENSGT00940000158795.j	ENSGT00390000017970.d.b	ENSGT01030000234564.a.a.b.b	ENSGT00940000153771.B.w	ENSGT00940000156411.od.b.b	ENSGT00950000182938.b.b.b.b.b.b.h.a.a
Coho salmon	MODERN SPECIES	28	FKBP15 (ENSOKIG00005046028)	fgf17 (ENSOKIG00005046602)	ENTPD2 (ENSOKIG00005046613)	nelfb (ENSOKIG00005046649)	ENSOKIG00005046731	arrdc1a (ENSOKIG00005046737)	cacna1ba (ENSOKIG00005047148)	MAN1B1 (ENSOKIG00005049871)	notch1b (ENSOKIG00005049913)	inpp5e (ENSOKIG00005050049)	pmpca (ENSOKIG00005050081)	PTGS1 (ENSOKIG00005050217) #27	LHX6 (ENSOKIG00005050386) #30	krt1-c5 (ENSOKIG00005050397)	ENSOKIG00005050409	zbtb26 (ENSOKIG00005050413) #22	GPR21 (ENSOKIG00005050417)	ENSOKIG00005050430 #20	sh2d3cb (ENSOKIG00005050447)	ENSOKIG00005050457	ENSOKIG00005050460	FAM163B (ENSOKIG00005050461)	ADAMTSL2 (ENSOKIG00005050467)	mymk (ENSOKIG00005050477)	slc2a8 (ENSOKIG00005050482)	gldc (ENSOKIG00005050497)	mboat4 (ENSOKIG00005050535)	coq2 (ENSOKIG00005050538)	ENSOKIG00005050541	ENSOKIG00005050542	CPLX4 (ENSOKIG00005050543)
Chinook salmon	MODERN SPECIES	3	FKBP15 (ENSOTSG00005044042)	fgf17 (ENSOTSG00005044537)	ENTPD2 (ENSOTSG00005044538)	nelfb (ENSOTSG00005044540)	arrdc1a (ENSOTSG00005045057)	cacna1ba (ENSOTSG00005045082)	man1b1b (ENSOTSG00005046690)	notch1b (ENSOTSG00005009635)	inpp5e (ENSOTSG00005009781)	pmpca (ENSOTSG00005009796)	ENSOTSG00005010937	PTGS1 (ENSOTSG00005010939) #27	LHX6 (ENSOTSG00005010952) #30	krt1-c5 (ENSOTSG00005010954)	ENSOTSG00005010957	zbtb26 (ENSOTSG00005010963) #22	GPR21 (ENSOTSG00005010964)	ENSOTSG00005010965 #20	sh2d3cb (ENSOTSG00005010967)	ptrh1 (ENSOTSG00005010969)	ENSOTSG00005010970	ENSOTSG00005010971	FAM163B (ENSOTSG00005010972)	ADAMTSL2 (ENSOTSG00005010977)	mymk (ENSOTSG00005010983)	slc2a8 (ENSOTSG00005010984)	gldc (ENSOTSG00005010988)	mboat4 (ENSOTSG00005011163)	coq2 (ENSOTSG00005011165)	ENSOTSG00005011168	cplx4a (ENSOTSG00005011170)
Rainbow trout	MODERN SPECIES	2	ENSOMYG00000038647	arrdc1a (ENSOMYG00000038634)	cacna1ba (ENSOMYG00000011876)	man1b1b (ENSOMYG00000009283)	ENSOMYG00000008306	ENSOMYG00000056878	inpp5e (ENSOMYG00000007023)	ENSOMYG00000048519	pmpca (ENSOMYG00000006347)	ENSOMYG00000049576	ENSOMYG00000004690 #27	ENSOMYG00000003601 #30	krt1-c5 (ENSOMYG00000003512)	ENSOMYG00000003458	ENSOMYG00000072137	zbtb26 (ENSOMYG00000003405) #22	ENSOMYG00000003363	ENSOMYG00000003330 #20	ENSOMYG00000003273	ENSOMYG00000003185	ENSOMYG00000031748	FAM163B (ENSOMYG00000031733)	ENSOMYG00000031637	mymk (ENSOMYG00000031725)	slc2a8 (ENSOMYG00000031508)	ENSOMYG00000048673	ENSOMYG00000031308	ENSOMYG00000031091	ENSOMYG00000031048	ENSOMYG00000031060	ENSOMYG00000031030
Salmo	ANCESTRAL SPECIES	58	ENSGT00940000167390.c	ENSGT01100000263542.B.b.a.b.e	ENSGT00390000012665.j	ENSGT01100000263537.b.a.b.e.a	ENSGT00940000166440	ENSGT00940000156002.a.b.lb.b	ENSGT00940000155275.c.b.b.e	ENSGT00940000155422.bb.b	ENSGT00940000157157.b.a.a.e	ENSGT00940000158199.l	ENSGT00940000156724.k	ENSGT00390000010743.b.b.d #27	ENSGT00940000156868.h.d #30	ENSGT00950000182969.A.a.a.b	ENSGT00940000165787.a.b.eb	ENSGT00940000157920.a.d #22	ENSGT00940000163543.a.c	ENSGT00940000154687.B.q.b.a.a #20	ENSGT00940000154130.a.b.f	ENSGT00390000004247.l.b	ENSGT00400000024875.c.a.b.a	ENSGT00940000159387.e.e	ENSGT00940000159447.m	ENSGT00940000160710.g	ENSGT00940000158795.j	ENSGT00390000017970.d.b	ENSGT01030000234564.a.a.b.b.f	ENSGT00940000153771.B.w	ENSGT00940000156411.od.b.b	ENSGT00950000182938.b.b.b.b.b.b.h.a.a	ENSGT00940000158944
Atlantic salmon	MODERN SPECIES	12	nelfb (ENSSSAG00000072439)	ENSSSAG00000106615	arrdc1a (ENSSSAG00000074053)	ENSSSAG00000098478	cacna1ba (ENSSSAG00000009555)	ENSSSAG00000008225	ENSSSAG00000007822	inpp5e (ENSSSAG00000007762)	pmpca (ENSSSAG00000065319)	ENSSSAG00000094072	pgh1 (ENSSSAG00000006478) #27	ENSSSAG00000086923 #30	krt1-c5 (ENSSSAG00000006317)	ENSSSAG00000083046	ENSSSAG00000006310	zbtb26 (ENSSSAG00000090802) #22	ENSSSAG00000006286	ENSSSAG00000083515	ENSSSAG00000006250 #20	ENSSSAG00000006182	ENSSSAG00000080160	ENSSSAG00000080158	FAM163B (ENSSSAG00000080156)	ENSSSAG00000080139	mymk (ENSSSAG00000080130)	ENSSSAG00000080126	ENSSSAG00000080122	ENSSSAG00000079812	ENSSSAG00000079778	COQ2 (ENSSSAG00000079775)	ENSSSAG00000081775
River trout	MODERN SPECIES	39	fgf17 (ENSSTUG00000021462)	ENTPD2 (ENSSTUG00000021428)	nelfb (ENSSTUG00000021155)	ENSSTUG00000021145	arrdc1a (ENSSTUG00000021140)	ehmt1a (ENSSTUG00000021036)	cacna1ba (ENSSTUG00000018726)	man1b1b (ENSSTUG00000018604)	notch1b (ENSSTUG00000012059)	inpp5e (ENSSTUG00000011860)	pmpca (ENSSTUG00000010933)	PTGS1 (ENSSTUG00000009525) #27	LHX6 (ENSSTUG00000009495) #30	krt1-c5 (ENSSTUG00000009475)	ENSSTUG00000009470	zbtb26 (ENSSTUG00000009462) #22	GPR21 (ENSSTUG00000009453)	ENSSTUG00000009387 #20	sh2d3cb (ENSSTUG00000009336)	ptrh1 (ENSSTUG00000009327)	ENSSTUG00000009314	FAM163B (ENSSTUG00000009302)	ADAMTSL2 (ENSSTUG00000009188)	mymk (ENSSTUG00000009158)	slc2a8 (ENSSTUG00000009111)	gldc (ENSSTUG00000008212)	mboat4 (ENSSTUG00000008108)	coq2 (ENSSTUG00000008104)	ENSSTUG00000008069	cplx4a (ENSSTUG00000008061)	emb (ENSSTUG00000008057)
Huchen	MODERN SPECIES	421															ENSHHUG00000026498	zbtb26 (ENSHHUG00000026507) #22	GPR21 (ENSHHUG00000026508)	ENSHHUG00000026511 #20	ENSHHUG00000026533	ENSHHUG00000026534	sh2d3cb (ENSHHUG00000026536)	ptrh1 (ENSHHUG00000026545)	ENSHHUG00000026558	ENSHHUG00000026565	FAM163B (ENSHHUG00000026567)	ADAMTSL2 (ENSHHUG00000026569)	mymk (ENSHHUG00000026581)	slc2a8 (ENSHHUG00000026584)	gldc (ENSHHUG00000026591)	mboat4 (ENSHHUG00000026747)	coq2 (ENSHHUG00000026762)
Northern pike	MODERN SPECIES	12	ENSELUG00000002099	ENSELUG00000002101	cacna1ba (ENSELUG00000002116)	man1b1b (ENSELUG00000002128)	dpp7 (ENSELUG00000002133)	notch1b (ENSELUG00000002143)	inpp5e (ENSELUG00000002148)	pmpca (ENSELUG00000002154)	ENSELUG00000002162 #27	LHX6 (ENSELUG00000002165) #30	krt1-c5 (ENSELUG00000002169)	ENSELUG00000032479	ENSELUG00000030271	ENSELUG00000030443	ENSELUG00000033055	zbtb26 (ENSELUG00000002173) #22	GPR21 (ENSELUG00000002175)	ENSELUG00000001098 #20	ELOVL7 (ENSELUG00000001485)	ercc8 (ENSELUG00000002194)	ndufaf2 (ENSELUG00000031461)	smim15 (ENSELUG00000001541)	ZSWIM6 (ENSELUG00000002207)	pgm5 (ENSELUG00000002214)	foxd5 (ENSELUG00000002216)	cbwd (ENSELUG00000002220)	DOCK8 (ENSELUG00000002234)	AOPEP (ENSELUG00000002248)	fancc (ENSELUG00000002254)	ptch1 (ENSELUG00000002263)	ENSELUG00000029031
Otomorpha	ANCESTRAL SPECIES	158	ENSGT00940000160710	ENSGT00940000159447	ENSGT00940000159387.e	ENSGT00400000024875.c.a.b	ENSGT00400000024875.c.b	ENSGT00940000154687.B.q.b #20	ENSGT00730000111240	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00940000158199	ENSGT00940000156724	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049
Clupeiformes	ANCESTRAL SPECIES	444														ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES		ENSDCDG00000003264	MN1 (ENSDCDG00000003257)	PITPNB (ENSDCDG00000003242)	TTC28 (ENSDCDG00000002870)	ENSDCDG00000002852	RPH3A (ENSDCDG00000002845)	ENSDCDG00000002840	ENSDCDG00000002835	ENSDCDG00000002832	ENSDCDG00000002830	ENSDCDG00000002823	ndufaf2 (ENSDCDG00000002820)	smim15 (ENSDCDG00000002816)	ENSDCDG00000002814 #30	ENSDCDG00000002812	zbtb26 (ENSDCDG00000002809) #22	zgc:101858 (ENSDCDG00000002805)	ppil3 (ENSDCDG00000002803)	ENSDCDG00000002801	ENSDCDG00000002798	ENSDCDG00000002794	ndufaf2 (ENSDCDG00000002791)	smim15 (ENSDCDG00000002789)	ENSDCDG00000002785 #30	krt1-c5 (ENSDCDG00000002778)	ENSDCDG00000002772	zbtb26 (ENSDCDG00000002769) #22	zgc:101858 (ENSDCDG00000002764)	ppil3 (ENSDCDG00000002759)	LRRC8A (ENSDCDG00000002758)	entr1 (ENSDCDG00000002754)
Denticle herring	MODERN SPECIES		ndufaf2 (ENSDCDG00000002820)	smim15 (ENSDCDG00000002816)	ENSDCDG00000002814 #30	ENSDCDG00000002812	zbtb26 (ENSDCDG00000002809) #22	zgc:101858 (ENSDCDG00000002805)	ppil3 (ENSDCDG00000002803)	ENSDCDG00000002801	ENSDCDG00000002798	ENSDCDG00000002794	ndufaf2 (ENSDCDG00000002791)	smim15 (ENSDCDG00000002789)	ENSDCDG00000002785 #30	krt1-c5 (ENSDCDG00000002778)	ENSDCDG00000002772	zbtb26 (ENSDCDG00000002769) #22	zgc:101858 (ENSDCDG00000002764)	ppil3 (ENSDCDG00000002759)	LRRC8A (ENSDCDG00000002758)	entr1 (ENSDCDG00000002754)	snapc4 (ENSDCDG00000002747)	CARD9 (ENSDCDG00000002727)	ENSDCDG00000002724	ENSDCDG00000002723	ENSDCDG00000002721	ENSDCDG00000002715	ENSDCDG00000002713	HECTD4 (ENSDCDG00000002644)	SDS (ENSDCDG00000002616)	vps33a (ENSDCDG00000002611)	tmed2 (ENSDCDG00000002605)
Atlantic herring	MODERN SPECIES	9								ENSCHAG00000024766	adgrv1 (ENSCHAG00000024778)	pomt1 (ENSCHAG00000024821)	CARD9 (ENSCHAG00000024915)	ENSCHAG00000024922	entr1 (ENSCHAG00000024932)	ppil3 (ENSCHAG00000024944)	LRRC8A (ENSCHAG00000024960)	zbtb26 (ENSCHAG00000024969) #22	ENSCHAG00000024975	ENSCHAG00000024988	ENSCHAG00000024990	ENSCHAG00000024998	abcg2a (ENSCHAG00000025025)	ptgs1 (ENSCHAG00000025340) #27	ENSCHAG00000025881	zgc:101858 (ENSCHAG00000025885)	ENSCHAG00000025893	ENSCHAG00000025899	ENSCHAG00000025905	kiaa0232 (ENSCHAG00000025910)	cfap157 (ENSCHAG00000025912)	tor2a (ENSCHAG00000025917)	pmpca (ENSCHAG00000025927)
Otophysi	ANCESTRAL SPECIES	24	ENSGT00940000160710	ENSGT00940000159447	ENSGT00940000159387.e	ENSGT00400000024875.c.a.b	ENSGT00400000024875.c.b	ENSGT00940000154687.B.q.b #20	ENSGT00730000111240	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00940000158199	ENSGT00940000156724	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000005869.b	ENSGT00940000164519.d	ENSGT00940000159244.a	ENSGT00940000159734	ENSGT00940000154416.C.c.a.a.b	ENSGT00940000181328	ENSGT00940000155214.k.b	ENSGT00440000039084.a.a	ENSGT00530000064123.h	ENSGT00940000156744.p	ENSGT00940000161616.c	ENSGT00940000155670
Characiphysae	ANCESTRAL SPECIES	14	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619	ENSGT00390000016407	ENSGT00390000004985.a	ENSGT00660000097118	ENSGT00940000156031.e	ENSGT00940000158953	ENSGT00940000165983	ENSGT00530000063907.c	ENSGT00940000157876.d	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000005869.b	ENSGT00940000156959.A.c.b	ENSGT00940000154143.c.a	ENSGT00940000153385.b.b	ENSGT00390000008519	ENSGT00940000157147.d	ENSGT00390000018059.a.a	ENSGT00500000044895	ENSGT00940000159244.a	ENSGT00940000159734	ENSGT00940000154416.C.c.a.a.b	ENSGT00940000181328
Channel catfish	MODERN SPECIES	14	cert1a (ENSIPUG00000018340)	arsk (ENSIPUG00000018314)	nol6 (ENSIPUG00000018266)	SKIC3 (ENSIPUG00000018203)	ENSIPUG00000018190	mctp1 (ENSIPUG00000018094)	slf1 (ENSIPUG00000018030)	ENSIPUG00000017995	ENSIPUG00000017986	fam172a (ENSIPUG00000017948)	nr2f1a (ENSIPUG00000017934)	ENSIPUG00000017926	ptgs1 (ENSIPUG00000017887) #27	krt1-c5 (ENSIPUG00000017851)	ENSIPUG00000017838	zbtb26 (ENSIPUG00000017831) #22	zgc:101858 (ENSIPUG00000017810)	Ppil3 (ENSIPUG00000017773)	Lrrc8a (ENSIPUG00000017760)	lix1 (ENSIPUG00000017729)	olfm1 (ENSIPUG00000017707)	rxrab (ENSIPUG00000017652)	ENSIPUG00000017642	ENSIPUG00000017617	edf1 (ENSIPUG00000017576)	ppapdc3 (ENSIPUG00000017565)	FAM78A (ENSIPUG00000017547)	ENSIPUG00000017476	ENSIPUG00000017457	qsox2 (ENSIPUG00000017441)	ENSIPUG00000017430
Characiphysae_b	ANCESTRAL SPECIES	12	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619	ENSGT00390000016407	ENSGT00390000004985.a	ENSGT00660000097118	ENSGT00940000156031.e	ENSGT00940000158953	ENSGT00940000165983	ENSGT00530000063907.c	ENSGT00940000157876.d	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000005869.b	ENSGT00940000156959.A.c.b	ENSGT00940000154143.c.a	ENSGT00940000153385.b.b	ENSGT00980000198604	ENSGT00390000008519	ENSGT00940000157147.d	ENSGT00390000018059.a.a	ENSGT00500000044895	ENSGT00940000159244.a	ENSGT00940000159734	ENSGT00940000154416.C.c.a.a.b
Electric eel	MODERN SPECIES	541													ptgs1 (ENSEEEG00000000418) #27	ENSEEEG00000000288 #30	krt1-c5 (ENSEEEG00000000274)	zbtb26 (ENSEEEG00000000226) #22	zgc:101858 (ENSEEEG00000000213)	PPIL3 (ENSEEEG00000000172)	LRRC8A (ENSEEEG00000000145)
Characoidei	ANCESTRAL SPECIES	10	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619	ENSGT00390000016407	ENSGT00390000004985.a	ENSGT00940000156031.e	ENSGT00940000158953	ENSGT00940000165983	ENSGT00530000063907.c	ENSGT00940000157876.d	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000005869.b	ENSGT00940000156959.A.c.b	ENSGT00940000154143.c.a	ENSGT00940000153385.b.b	ENSGT00980000198604	ENSGT00390000008519	ENSGT00940000157147.d	ENSGT00390000018059.a.a	ENSGT00500000044895	ENSGT00940000159244.a	ENSGT00940000159734	ENSGT01030000234570.d.b.a.b.a.d.a
Red-bellied piranha	MODERN SPECIES	17	ankrd31 (ENSPNAG00000004792)	hmgcra (ENSPNAG00000028218)	cert1a (ENSPNAG00000028148)	arsk (ENSPNAG00000006490)	nol6 (ENSPNAG00000028102)	SKIC3 (ENSPNAG00000006378)	ENSPNAG00000006063	MCTP1 (ENSPNAG00000027085)	ENSPNAG00000004118	ENSPNAG00000026743	fam172a (ENSPNAG00000026657)	nr2f1a (ENSPNAG00000026577)	ptgs1 (ENSPNAG00000005508) #27	LHX6 (ENSPNAG00000026432) #30	krt1-c5 (ENSPNAG00000025840)	zbtb26 (ENSPNAG00000025830) #22	zgc:101858 (ENSPNAG00000003966)	ppil3 (ENSPNAG00000025814)	LRRC8A (ENSPNAG00000025808)	STX7 (ENSPNAG00000025803)	lix1 (ENSPNAG00000005472)	olfm1a (ENSPNAG00000025754)	rxrab (ENSPNAG00000005154)	ENSPNAG00000025678	ENSPNAG00000025626	ENSPNAG00000025519	edf1 (ENSPNAG00000003925)	plpp7a (ENSPNAG00000006659)	fam78aa (ENSPNAG00000025468)	ENSPNAG00000025439	ENSPNAG00000025280
Mexicana tetra	MODERN SPECIES	26	QSOX2 (ENSAMXG00000038931)	ENSAMXG00000007711	ENSAMXG00000007720	fam78aa (ENSAMXG00000038971)	plpp7a (ENSAMXG00000030606)	edf1 (ENSAMXG00000007737)	ENSAMXG00000040048	ENSAMXG00000007739	ENSAMXG00000007741	rxrab (ENSAMXG00000007750)	olfm1a (ENSAMXG00000029681)	lix1 (ENSAMXG00000007757)	zgc:101858 (ENSAMXG00000035229)	LRRC8A (ENSAMXG00000007760)	ppil3 (ENSAMXG00000007761)	zbtb26 (ENSAMXG00000034454) #22	krt1-c5 (ENSAMXG00000007764)	ENSAMXG00000007769 #30	ptgs1 (ENSAMXG00000007774) #27	ENSAMXG00000007776	nr2f1a (ENSAMXG00000007779)	fam172a (ENSAMXG00000007782)	ENSAMXG00000007786	ENSAMXG00000035646	MCTP1 (ENSAMXG00000007805)	ENSAMXG00000035443	SKIC3 (ENSAMXG00000007850)	nol6 (ENSAMXG00000007881)	arsk (ENSAMXG00000007903)	cert1a (ENSAMXG00000007931)	hmgcra (ENSAMXG00000007971)
Cyprinoidei	ANCESTRAL SPECIES	43	ENSGT00940000159447	ENSGT00940000159387.e	ENSGT00940000157157.b.a.a	ENSGT00950000182975.a.a.b.k	ENSGT00940000156880.c.b	ENSGT00940000162727.a.a	ENSGT00730000111240	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00940000158199	ENSGT00940000156724	ENSGT00390000010743.b.a #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000164473	ENSGT00940000163579	ENSGT00940000154043.A.j.a	ENSGT00390000005869.b	ENSGT00940000164519.d	ENSGT00940000159244.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	183	ENSGT00940000159447.l	ENSGT00940000159387.e.h	ENSGT00940000157157.b.a.a.b	ENSGT00950000182975.a.a.b.k.j	ENSGT00940000156880.c.b.a	ENSGT00940000162727.a.a	ENSGT00730000111240.i	ENSGT00940000154130.a.b.f.c	ENSGT00950000182888.a.b.g	ENSGT00940000158199.m	ENSGT00940000156724.c	ENSGT00940000156511.b.nb	ENSGT00390000010743.b.a.c #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a.d	ENSGT00940000157920.a.g #22	ENSGT00940000164473.h	ENSGT00940000163579	ENSGT00940000154043.A.j.a.g	ENSGT00390000005869.b.d	ENSGT00940000156959.A.c.b.b	ENSGT00940000159789.q.a	ENSGT00940000153385.b.b.b	ENSGT00390000008519.ac.a	ENSGT00940000157147.d.a	ENSGT00390000018059.a.a.a.b	ENSGT00940000164519.d	ENSGT00940000159244.a	ENSGT00940000159734.g.b	ENSGT00940000159734.g.a	ENSGT00940000154667.a.x.b
Goldfish	MODERN SPECIES	44	ENSCARG00000042213	mymk (ENSCARG00000042224)	FAM163B (ENSCARG00000042268)	notch1b (ENSCARG00000042660)	camsap1b (ENSCARG00000050080)	KCNT1 (ENSCARG00000050577)	col27a1b (ENSCARG00000051323)	cfap157 (ENSCARG00000051517)	sh2d3cb (ENSCARG00000051550)	tor2a (ENSCARG00000051640)	inpp5e (ENSCARG00000051674)	pmpca (ENSCARG00000051779)	ENSCARG00000053096	ptgs1 (ENSCARG00000053126) #27	krt1-c5 (ENSCARG00000054061)	zbtb26 (ENSCARG00000054137) #22	ppil3 (ENSCARG00000054152)	LRRC8A (ENSCARG00000054192)	lix1 (ENSCARG00000054201)	olfm1a (ENSCARG00000054216)	ENSCARG00000054258	ENSCARG00000054305	rxrab (ENSCARG00000054336)	ENSCARG00000054567	edf1 (ENSCARG00000054664)	plpp7a (ENSCARG00000054680)	fam78aa (ENSCARG00000012893)	QSOX2 (ENSCARG00000012902)	ENSCARG00000013017	ak5l (ENSCARG00000013023)	cmlc1 (ENSCARG00000013031)
Cyprininae_a	ANCESTRAL SPECIES	75	ENSGT00940000159447.l	ENSGT00940000159387.e.h	ENSGT00940000157157.b.a.a.b	ENSGT00950000182975.a.a.b.k.j	ENSGT00940000156880.c.b.a	ENSGT00940000162727.a.a	ENSGT00730000111240.i	ENSGT00940000154130.a.b.f.c	ENSGT00950000182888.a.b.g	ENSGT00940000158199.m	ENSGT00940000156724.c	ENSGT00940000156511.b.nb	ENSGT00390000010743.b.a.c #27	ENSGT00940000156868.h #30	ENSGT00950000182969.A.a.a.d	ENSGT00940000157920.a.g #22	ENSGT00940000164473.h	ENSGT00940000163579	ENSGT00940000154043.A.j.a.g	ENSGT00390000005869.b.d	ENSGT00940000156959.A.c.b.b	ENSGT00940000159789.q.a	ENSGT00940000153385.b.b.b	ENSGT00390000008519.ac.a	ENSGT00940000157147.d.a	ENSGT00390000018059.a.a.a.b	ENSGT00940000164519.d	ENSGT00940000159244.a.i	ENSGT00940000159734.g.a	ENSGT00940000154667.a.x.b	ENSGT00940000155917.cb.a
Common carp reference	MODERN SPECIES	7	ENSCCRG00000061329	ENSCCRG00000069117	ENSCCRG00000065726	col27a1b (ENSCCRG00000054958)	cfap157 (ENSCCRG00000008803)	sh2d3cb (ENSCCRG00000029992)	tor2a (ENSCCRG00000029989)	ENSCCRG00000055839	inpp5e (ENSCCRG00000029962)	pmpca (ENSCCRG00000037883)	ENSCCRG00000073124	ptgs1 (ENSCCRG00000065272) #27	ENSCCRG00000042349 #30	ENSCCRG00000082697	krt1-c5 (ENSCCRG00000001156)	zbtb26 (ENSCCRG00000013354) #22	zgc:101858 (ENSCCRG00000068545)	ppil3 (ENSCCRG00000082790)	ENSCCRG00000013342	lix1 (ENSCCRG00000063910)	olfm1a (ENSCCRG00000027322)	rxrab (ENSCCRG00000027314)	ENSCCRG00000003296	edf1 (ENSCCRG00000026176)	plpp7a (ENSCCRG00000056473)	fam78aa (ENSCCRG00000076571)	ENSCCRG00000000689	ENSCCRG00000030933	ENSCCRG00000032723	ak5l (ENSCCRG00000013667)	pappab (ENSCCRG00000021074)
Golden-line barbel	MODERN SPECIES	94			camsap1b (ENSSGRG00000026120)	ENSSGRG00000026156	ENSSGRG00000026158	ENSSGRG00000026159	ENSSGRG00000026162	cfap157 (ENSSGRG00000026164)	sh2d3cb (ENSSGRG00000026166)	tor2a (ENSSGRG00000026168)	ENSSGRG00000026169	inpp5e (ENSSGRG00000026170)	pmpca (ENSSGRG00000026182)	ptgs1 (ENSSGRG00000026513) #27	krt1-c5 (ENSSGRG00000027990)	zbtb26 (ENSSGRG00000027992) #22	ppil3 (ENSSGRG00000027993)	ENSSGRG00000028003	lix1 (ENSSGRG00000028005)	olfm1a (ENSSGRG00000028006)	rxrab (ENSSGRG00000028010)	ENSSGRG00000028019	ENSSGRG00000028020	edf1 (ENSSGRG00000028048)	plpp7a (ENSSGRG00000028052)	ENSSGRG00000028054	ENSSGRG00000028056	QSOX2 (ENSSGRG00000028065)	ENSSGRG00000028164	ak5l (ENSSGRG00000028166)	cmlc1 (ENSSGRG00000028169)
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00940000159447.k	ENSGT00940000159387.e.g	ENSGT00940000157157.b.a.a.a	ENSGT00950000182975.a.a.b.k.i	ENSGT00940000156880.c.b.b	ENSGT00530000064485.cb	ENSGT00940000158302.d.a	ENSGT00730000111240.j	ENSGT00940000154130.a.b.f.d	ENSGT00950000182888.a.b.h	ENSGT00390000004247	ENSGT00940000158199.n	ENSGT00940000156724.d	ENSGT00390000010743.b.a.d #27	ENSGT00950000182969.A.a.a.c	ENSGT00940000157920.a.h #22	ENSGT00940000164473.g	ENSGT00940000154043.A.j.a.h	ENSGT00390000005869.b.c	ENSGT00940000156959.A.c.b.a	ENSGT00940000159789.q.b	ENSGT00940000154143.c.a	ENSGT00940000153385.b.b.a	ENSGT00390000008519.ac.b	ENSGT00940000157147.d.b	ENSGT00390000018059.a.a.a.a	ENSGT00500000044895.e	ENSGT00940000159734.h	ENSGT00940000154667.a.x.a	ENSGT00940000155917.cb.b	ENSGT01030000234570.d.b.a.b.a.d.a.d
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000159387.e.g	ENSGT00940000157157.b.a.a.a	ENSGT00950000182975.a.a.b.k.i	ENSGT00940000156880.c.b.b	ENSGT00940000155199.e.b	ENSGT00530000064485.cb	ENSGT00940000158302.d.a	ENSGT00730000111240.j	ENSGT00940000154130.a.b.f.d	ENSGT00950000182888.a.b.h	ENSGT00390000004247	ENSGT00940000158199.n	ENSGT00940000156724.d	ENSGT00390000010743.b.a.d #27	ENSGT00950000182969.A.a.a.c	ENSGT00940000157920.a.h #22	ENSGT00940000164473.g	ENSGT00940000154043.A.j.a.h	ENSGT00390000005869.b.c	ENSGT00940000156959.A.c.b.a	ENSGT00940000159789.q.b	ENSGT00940000154143.c.a	ENSGT00940000153385.b.b.a	ENSGT00390000008519.ac.b	ENSGT00940000157147.d.b	ENSGT00390000018059.a.a.a.a	ENSGT00500000044895.e	ENSGT00940000159734.h	ENSGT00940000154667.a.x.a	ENSGT00940000155917.cb.b	ENSGT01030000234570.d.b.a.b.a.d.a.d
Golden-line barbel	MODERN SPECIES	453		notch1b (ENSSGRG00000053707)	camsap1b (ENSSGRG00000053743)	ENSSGRG00000053748	KCNT1 (ENSSGRG00000053752)	ENSSGRG00000053759	ENSSGRG00000053766	cfap157 (ENSSGRG00000053767)	sh2d3cb (ENSSGRG00000053768)	tor2a (ENSSGRG00000053771)	ptrh1 (ENSSGRG00000053773)	inpp5e (ENSSGRG00000053774)	pmpca (ENSSGRG00000053792)	ptgs1 (ENSSGRG00000053795) #27	krt1-c5 (ENSSGRG00000053796)	zbtb26 (ENSSGRG00000053797) #22	zgc:101858 (ENSSGRG00000053798)	ppil3 (ENSSGRG00000053799)	ENSSGRG00000053802	lix1 (ENSSGRG00000053803)	olfm1a (ENSSGRG00000053804)	rxrab (ENSSGRG00000053806)	ENSSGRG00000053807	edf1 (ENSSGRG00000053867)	plpp7a (ENSSGRG00000053870)	fam78aa (ENSSGRG00000053871)	ENSSGRG00000053872	QSOX2 (ENSSGRG00000053875)
Common carp reference	MODERN SPECIES	15	notch1b (ENSCCRG00000048100)	camsap1b (ENSCCRG00000048553)	ENSCCRG00000048608	ENSCCRG00000076707	ENSCCRG00000055170	cfap157 (ENSCCRG00000039547)	sh2d3cb (ENSCCRG00000039541)	tor2a (ENSCCRG00000076886)	ptrh1 (ENSCCRG00000066590)	inpp5e (ENSCCRG00000037910)	pmpca (ENSCCRG00000029418)	ENSCCRG00000060409	ENSCCRG00000068756	ptgs1 (ENSCCRG00000029174) #27	krt1-c5 (ENSCCRG00000042925)	zbtb26 (ENSCCRG00000080338) #22	zgc:101858 (ENSCCRG00000074879)	ENSCCRG00000001143	lix1 (ENSCCRG00000063150)	olfm1a (ENSCCRG00000012569)	rxrab (ENSCCRG00000071227)	ENSCCRG00000041126	ENSCCRG00000036933	edf1 (ENSCCRG00000036947)	plpp7a (ENSCCRG00000000673)	fam78aa (ENSCCRG00000066899)	ENSCCRG00000057801	ENSCCRG00000081251	ENSCCRG00000076454	ak5l (ENSCCRG00000032721)	pappab (ENSCCRG00000032966)
Goldfish	MODERN SPECIES	23	notch1b (ENSCARG00000036847)	camsap1b (ENSCARG00000043184)	ENSCARG00000043527	KCNT1 (ENSCARG00000043579)	ENSCARG00000043710	ENSCARG00000043755	cfap157 (ENSCARG00000043892)	sh2d3cb (ENSCARG00000043923)	tor2a (ENSCARG00000043991)	ptrh1 (ENSCARG00000044011)	inpp5e (ENSCARG00000044047)	pmpca (ENSCARG00000044126)	ptgs1 (ENSCARG00000044239) #27	ENSCARG00000046492 #30	krt1-c5 (ENSCARG00000046531)	zbtb26 (ENSCARG00000046557) #22	zgc:101858 (ENSCARG00000046585)	ENSCARG00000046691	lix1 (ENSCARG00000046708)	olfm1a (ENSCARG00000046728)	rxrab (ENSCARG00000005823)	ENSCARG00000006260	ENSCARG00000006451	edf1 (ENSCARG00000006631)	plpp7a (ENSCARG00000006680)	fam78aa (ENSCARG00000006689)	ENSCARG00000006699	QSOX2 (ENSCARG00000006712)	ENSCARG00000006862	ak5l (ENSCARG00000006871)	cmlc1 (ENSCARG00000006892)
Zebrafish	MODERN SPECIES	20	camsap1b (ENSDARG00000035122)	KCNT1 (ENSDARG00000104868)	col27a1b (ENSDARG00000099930)	cfap157 (ENSDARG00000099042)	sh2d3cb (ENSDARG00000104555)	tor2a (ENSDARG00000100559)	ptrh1 (ENSDARG00000098206)	inpp5e (ENSDARG00000103926)	pmpca (ENSDARG00000102607)	anxa1b (ENSDARG00000100095)	anxa1c (ENSDARG00000104359)	anxa1d (ENSDARG00000098481)	ptgs1 (ENSDARG00000052148) #27	LHX6 (ENSDARG00000052165) #30	krt1-c5 (ENSDARG00000026979)	zbtb26 (ENSDARG00000028949) #22	zgc:101858 (ENSDARG00000035129)	ppil3 (ENSDARG00000033370)	LRRC8A (ENSDARG00000052155)	lix1 (ENSDARG00000052154)	olfm1a (ENSDARG00000018270)	rxrab (ENSDARG00000035127)	brd3b (ENSDARG00000100129)	ENSDARG00000105544	edf1 (ENSDARG00000009950)	plpp7a (ENSDARG00000103712)	fam78aa (ENSDARG00000101217)	ENSDARG00000112370	QSOX2 (ENSDARG00000077174)	ENSDARG00000092517	ak5l (ENSDARG00000017739)
Osteoglossiformes	ANCESTRAL SPECIES	117	ENSGT00530000063335.B.a.b	ENSGT00940000158634.a	ENSGT00390000005811	ENSGT00940000156639	ENSGT00940000157654	ENSGT00940000158126	ENSGT00640000091523	ENSGT00940000154110.a	ENSGT00390000014658	ENSGT00940000157157.b.a.a	ENSGT00940000156724	ENSGT00390000010743.b.a.b #27	ENSGT00940000156868.h #30	ENSGT00390000008938 #32	ENSGT00950000182969.A.a.a	ENSGT00940000157920.a #22	ENSGT00940000163543	ENSGT00940000154687.B.q.b.c #20	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00730000111240	ENSGT00390000004247	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a	ENSGT00940000159387.e
P. kingsleyae	MODERN SPECIES	458				pgm5 (ENSPKIG00000015206)	cbwd (ENSPKIG00000015095)	ENSPKIG00000015006	ubac1 (ENSPKIG00000014942)	notch1b (ENSPKIG00000014821)	pmpca (ENSPKIG00000014739)	rpl28 (ENSPKIG00000014698)	ENSPKIG00000014646	PTGS1 (ENSPKIG00000014608) #27	LHX6 (ENSPKIG00000014555) #30	ndufa8 (ENSPKIG00000014521) #32	krt1-c5 (ENSPKIG00000014498)	zbtb26 (ENSPKIG00000014483) #22
Asian bonytongue	MODERN SPECIES		ccdc93 (ENSSFOG00015024988)	INSIG2 (ENSSFOG00015028296)	ENSSFOG00015028367	ENSSFOG00015006650	ENSSFOG00015029379	ENSSFOG00015006638	ENSSFOG00015030581	LRRC24 (ENSSFOG00015006665)	THEM6 (ENSSFOG00015006698)	THEM6 (ENSSFOG00015031535)	EEF1D (ENSSFOG00015006740)	ARHGAP39 (ENSSFOG00015006826)	LHX6 (ENSSFOG00015006864) #30	ndufa8 (ENSSFOG00015006890) #32	krt1-c5 (ENSSFOG00015006903)	zbtb26 (ENSSFOG00015006928) #22	GPR21 (ENSSFOG00015006937)	ENSSFOG00015006972 #20	sh2d3cb (ENSSFOG00015007015)	tor2a (ENSSFOG00015027795)	cfap157 (ENSSFOG00015007039)	ptrh1 (ENSSFOG00015007053)	ENSSFOG00015007079	ENSSFOG00015007097	FAM163B (ENSSFOG00015025811)	ADAMTSL2 (ENSSFOG00015007117)	mymk (ENSSFOG00015007195)	slc2a8 (ENSSFOG00015007238)	ptgdsa (ENSSFOG00015007285)	nrarpb (ENSSFOG00015032220)	ENSSFOG00015007402
Spotted gar	MODERN SPECIES	660	psmd5 (ENSLOCG00000003231)	col27a1b (ENSLOCG00000003177)	zgc:101858 (ENSLOCG00000003168)	PPIL3 (ENSLOCG00000003154)	ENSLOCG00000003100	ENSLOCG00000003085	rpl28 (ENSLOCG00000003073)	pdcl (ENSLOCG00000003058) #25	PTGS1 (ENSLOCG00000003036) #27	mrrf (ENSLOCG00000003021) #28	rbm18 (ENSLOCG00000003002) #29	lhx6a (ENSLOCG00000002986) #30	morn5 (ENSLOCG00000002968) #31	ndufa8 (ENSLOCG00000002944) #32	si:ch211-243g18.2 (ENSLOCG00000002921)	zbtb26 (ENSLOCG00000002911) #22	ENSLOCG00000002894 #24	RABGAP1 (ENSLOCG00000002828) #21	STRBP (ENSLOCG00000002814) #20	sh2d3cb (ENSLOCG00000002795)	tor2a (ENSLOCG00000002778)	urm1 (ENSLOCG00000002768)	CERCAM (ENSLOCG00000002746)	cfap157 (ENSLOCG00000002725)	sardh (ENSLOCG00000002697)	dbh (ENSLOCG00000002677)	FAM163B (ENSLOCG00000002663)	ADAMTSL2 (ENSLOCG00000002647)	mymk (ENSLOCG00000002633)	ENSLOCG00000002619	slc27a4 (ENSLOCG00000002609)
Reedfish	MODERN SPECIES	17	zgc:101858 (ENSECRG00000012270)	PPIL3 (ENSECRG00000012237)	ENSECRG00000012050	ENSECRG00000011964	rpl28 (ENSECRG00000011937)	pdcl (ENSECRG00000011923) #25	PTGS1 (ENSECRG00000011891) #27	ENSECRG00000011876	mrrf (ENSECRG00000011864) #28	rbm18 (ENSECRG00000011852) #29	lhx6a (ENSECRG00000011822) #30	morn5 (ENSECRG00000011802) #31	ndufa8 (ENSECRG00000011788) #32	si:ch211-243g18.2 (ENSECRG00000011765)	ENSECRG00000011752 ##22	zbtb26 (ENSECRG00000011741) #22	RC3H2 (ENSECRG00000011691) #24	RABGAP1 (ENSECRG00000011592) #21	STRBP (ENSECRG00000011531) #20	sh2d3cb (ENSECRG00000011472)	tor2a (ENSECRG00000011442)	urm1 (ENSECRG00000011426)	ENSECRG00000011398	ENSECRG00000011360	ptrh1 (ENSECRG00000011332)	slc27a4 (ENSECRG00000011301)	ENSECRG00000011247	ENSECRG00000021099	ENSECRG00000021086	mymk (ENSECRG00000021067)	ADAMTSL2 (ENSECRG00000021032)