Mammalia	ANCESTRAL SPECIES	22	ENSGT00940000161448	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00390000008327	ENSGT00940000154206.b	ENSGT00390000014969	ENSGT00440000033970	ENSGT00940000154544 #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00390000001858	ENSGT00940000154186.a #32	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36	ENSGT00530000063410.a #37
Theria	ANCESTRAL SPECIES	13	ENSGT00940000161448	ENSGT00390000001607	ENSGT01090000260080.a	ENSGT00390000008327	ENSGT00940000154206.b	ENSGT00390000014969	ENSGT00440000033970	ENSGT00940000154544 #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00940000154186.a #32	ENSGT00390000001858	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36	ENSGT00530000063410.a #37
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00390000001858	ENSGT00940000154186.a #32	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36	ENSGT00530000063410.a #37
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00910000147398	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00390000001858	ENSGT00940000154186.a #32	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000153876.B	ENSGT00390000003682	ENSGT00940000156841 #26	ENSGT00910000147398	ENSGT00940000154556 #27	ENSGT00940000155078.a.b.a.b	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00390000001858	ENSGT00940000154186.a #32	ENSGT00940000155337 #33
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00910000147398	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00940000154186.a #32	ENSGT00390000001858	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00910000147214	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00940000154186.a #32	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36	ENSGT00530000063410.a #37
Suina	ANCESTRAL SPECIES	13	ENSGT00940000158488 #7	ENSGT00940000156522 #8	ENSGT00930000150969.A.c.b.a #9	ENSGT00930000150969.A.c.a #10	ENSGT00930000150969.A.c.b.b #11	ENSGT00940000156279 #12	ENSGT00950000183015.A #13	ENSGT00940000154544.a #14	ENSGT00390000010591 #15	ENSGT00390000012248 #16	ENSGT00940000157885 #17	ENSGT00390000004284 #18	ENSGT00940000156530.c #19	ENSGT00390000018052 #20	ENSGT00950000183091.A.b #21	ENSGT00390000015405 #22	ENSGT00390000009597 #23	ENSGT00940000156327 #24	ENSGT00940000156841 #26	ENSGT00910000147398	ENSGT00940000154556 #27	ENSGT00940000154958 #28	ENSGT00810000125473.A #29	ENSGT00940000157081 #30	ENSGT00530000063867.b #31	ENSGT00940000154186.a #32	ENSGT00940000155337 #33	ENSGT00950000183050.b.b.a #34	ENSGT00390000000583 #35	ENSGT00940000153464.B #36	ENSGT00530000063410.a #37
Pig	DUPLICATION
Pig	MODERN SPECIES	11	GFPT1 (ENSSSCG00000008339) #7	ANTXR1 (ENSSSCG00000008340) #8	GKN1 (ENSSSCG00000035529) #9	GKN2 (ENSSSCG00000038802) #10	GKN3 (ENSSSCG00000037028) #11	BMP10 (ENSSSCG00000032071) #12	ARHGAP25 (ENSSSCG00000008344) #13	PROKR1 (ENSSSCG00000038148) #14	APLF (ENSSSCG00000008346) #15	FBXO48 (ENSSSCG00000008347) #16	PLEK (ENSSSCG00000008348) #17	CNRIP1 (ENSSSCG00000008349) #18	PPP3R1 (ENSSSCG00000036115) #19	PNO1 (ENSSSCG00000008352) #20	DNAAF10 (ENSSSCG00000008353) #21	C1D (ENSSSCG00000039331) #22	ETAA1 (ENSSSCG00000023908) #23	MEIS1 (ENSSSCG00000039161) #24	ENSSSCG00000044348 #25	SPRED2 (ENSSSCG00000008357) #26	ACTR2 (ENSSSCG00000008358) #27	RAB1A (ENSSSCG00000008359) #28	CEP68 (ENSSSCG00000008360) #29	SLC1A4 (ENSSSCG00000028282) #30	SERTAD2 (ENSSSCG00000037002) #31	AFTPH (ENSSSCG00000008363) #32	LGALSL (ENSSSCG00000030005) #33	PELI1 (ENSSSCG00000028947) #34	VPS54 (ENSSSCG00000027509) #35	UGP2 (ENSSSCG00000008368) #36	MDH1 (ENSSSCG00000025751) #37
Pig	MODERN SPECIES	10	MRPL16 (ENSSSCG00000013118)	CBLIF (ENSSSCG00000013117)	TCN1 (ENSSSCG00000039252)	OOSP3 (ENSSSCG00000048002)	ENSSSCG00000061888	ENSSSCG00000055543	OOSP2 (ENSSSCG00000039560)	MS4A2 (ENSSSCG00000034506)	ENSSSCG00000013100	ENSSSCG00000041746	ENSSSCG00000051873	MS4A7 (ENSSSCG00000013102)	ENSSSCG00000022114	MS4A5 (ENSSSCG00000026796)	MS4A1 (ENSSSCG00000021812)	ENSSSCG00000035701 ##22	MS4A12 (ENSSSCG00000027387)	MS4A13 (ENSSSCG00000032893)	ENSSSCG00000057843	ENSSSCG00000031637	MS4A8 (ENSSSCG00000030879)	MS4A15 (ENSSSCG00000034847)	MS4A10 (ENSSSCG00000037987)	CCDC86 (ENSSSCG00000013105)	PTGDR2 (ENSSSCG00000013106)	PRPF19 (ENSSSCG00000013107)	TMEM109 (ENSSSCG00000013110)	TMEM132A (ENSSSCG00000013113)	SLC15A3 (ENSSSCG00000013114)	CD6 (ENSSSCG00000013111)	CD5 (ENSSSCG00000013115)