Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147890 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Primates ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147890 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Haplorrhini ANCESTRAL SPECIES 17 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147890 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Simiiformes ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Catarrhini ANCESTRAL SPECIES 20 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Hominoidea ANCESTRAL SPECIES 20 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.b #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00910000146962 Hominidae ANCESTRAL SPECIES 22 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.b #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00910000146962 Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.b.a.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00910000147041 #35 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.b.a.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00910000147041 #35 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Pan ANCESTRAL SPECIES 20 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00510000046986.m.a #29 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.b.a.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00910000147041 #35 ENSGT00860000136046 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Bonobo DUPLICATION Bonobo MODERN SPECIES 6 SLC51B (ENSPPAG00000029986) #7 RASL12 (ENSPPAG00000031385) #8 KBTBD13 (ENSPPAG00000010722) #9 ENSPPAG00000033811 #10 ENSPPAG00000035027 #11 CLPX (ENSPPAG00000040563) #12 CILP (ENSPPAG00000042751) #13 PARP16 (ENSPPAG00000030232) #14 IGDCC3 (ENSPPAG00000042057) #15 IGDCC4 (ENSPPAG00000036548) #16 DPP8 (ENSPPAG00000032419) #17 HACD3 (ENSPPAG00000014660) #18 INTS14 (ENSPPAG00000030391) #19 SLC24A1 (ENSPPAG00000042941) #20 DENND4A (ENSPPAG00000022752) #21 RAB11A (ENSPPAG00000030195) #22 MEGF11 (ENSPPAG00000043580) #23 DIS3L (ENSPPAG00000019888) #24 TIPIN (ENSPPAG00000033427) #25 ENSPPAG00000041842 #26 ENSPPAG00000038145 #27 MAP2K1 (ENSPPAG00000028577) #28 ENSPPAG00000033063 #29 SNAPC5 (ENSPPAG00000041196) #30 ENSPPAG00000035309 #31 ZWILCH (ENSPPAG00000033861) #32 LCTL (ENSPPAG00000040836) #33 SMAD6 (ENSPPAG00000027722) #34 ENSPPAG00000036915 #35 ENSPPAG00000020485 #36 SMAD3 (ENSPPAG00000033769) #37 Bonobo MODERN SPECIES 1 TCTN3 (ENSPPAG00000043730) ALDH18A1 (ENSPPAG00000041118) SORBS1 (ENSPPAG00000027495) PDLIM1 (ENSPPAG00000024370) ACSM6 (ENSPPAG00000037620) CYP2C8 (ENSPPAG00000040639) CYP2C9 (ENSPPAG00000042322) CYP2C19 (ENSPPAG00000034854) HELLS (ENSPPAG00000001726) TBC1D12 (ENSPPAG00000031966) NOC3L (ENSPPAG00000043755) PLCE1 (ENSPPAG00000033051) ENSPPAG00000026684 ENSPPAG00000041375 SLC35G1 (ENSPPAG00000030552) ENSPPAG00000027315 ##22 LGI1 (ENSPPAG00000035614) FRA10AC1 (ENSPPAG00000038889) PDE6C (ENSPPAG00000026870) RBP4 (ENSPPAG00000041588) FFAR4 (ENSPPAG00000013271) CEP55 (ENSPPAG00000040332) MYOF (ENSPPAG00000040575) ENSPPAG00000029158 CYP26A1 (ENSPPAG00000033856) CYP26C1 (ENSPPAG00000036382) EXOC6 (ENSPPAG00000026890) HHEX (ENSPPAG00000036114) ENSPPAG00000033361 KIF11 (ENSPPAG00000043128) IDE (ENSPPAG00000044069) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 6 SLC51B (ENSPTRG00000007172) #7 RASL12 (ENSPTRG00000007173) #8 KBTBD13 (ENSPTRG00000042018) #9 UBAP1L (ENSPTRG00000039407) #10 PDCD7 (ENSPTRG00000045629) #11 CLPX (ENSPTRG00000007176) #12 CILP (ENSPTRG00000007177) #13 PARP16 (ENSPTRG00000007178) #14 IGDCC3 (ENSPTRG00000007179) #15 IGDCC4 (ENSPTRG00000007180) #16 DPP8 (ENSPTRG00000007182) #17 HACD3 (ENSPTRG00000007183) #18 INTS14 (ENSPTRG00000007184) #19 SLC24A1 (ENSPTRG00000007185) #20 DENND4A (ENSPTRG00000007186) #21 RAB11A (ENSPTRG00000044358) #22 MEGF11 (ENSPTRG00000007189) #23 DIS3L (ENSPTRG00000007191) #24 TIPIN (ENSPTRG00000007192) #25 ENSPTRG00000051889 #26 MAP2K1 (ENSPTRG00000007193) #28 ENSPTRG00000049603 #29 SNAPC5 (ENSPTRG00000007194) #30 RPL4 (ENSPTRG00000007195) #31 ZWILCH (ENSPTRG00000007196) #32 LCTL (ENSPTRG00000007197) #33 SMAD6 (ENSPTRG00000007198) #34 ENSPTRG00000044014 #35 ENSPTRG00000047146 #36 SMAD3 (ENSPTRG00000007199) #37 AAGAB (ENSPTRG00000007202) Chimpanzee MODERN SPECIES 1 ALDH18A1 (ENSPTRG00000002785) SORBS1 (ENSPTRG00000002784) PDLIM1 (ENSPTRG00000002783) ACSM6 (ENSPTRG00000002782) CYP2C8 (ENSPTRG00000002781) CYP2C9 (ENSPTRG00000002780) CYP2C19 (ENSPTRG00000002779) ENSPTRG00000051994 HELLS (ENSPTRG00000002778) TBC1D12 (ENSPTRG00000002777) NOC3L (ENSPTRG00000002776) PLCE1 (ENSPTRG00000002775) ENSPTRG00000045483 PIPSL (ENSPTRG00000046503) SLC35G1 (ENSPTRG00000002772) ENSPTRG00000047673 #22 LGI1 (ENSPTRG00000002771) FRA10AC1 (ENSPTRG00000002770) PDE6C (ENSPTRG00000002769) RBP4 (ENSPTRG00000002768) FFAR4 (ENSPTRG00000002767) CEP55 (ENSPTRG00000002766) MYOF (ENSPTRG00000002765) ENSPTRG00000052387 ENSPTRG00000047997 CYP26A1 (ENSPTRG00000002763) CYP26C1 (ENSPTRG00000002762) EXOC6 (ENSPTRG00000002761) HHEX (ENSPTRG00000002760) ENSPTRG00000042999 KIF11 (ENSPTRG00000002758) Human MODERN SPECIES 6 SLC51B (ENSG00000186198) #7 RASL12 (ENSG00000103710) #8 KBTBD13 (ENSG00000234438) #9 UBAP1L (ENSG00000246922) #10 PDCD7 (ENSG00000090470) #11 CLPX (ENSG00000166855) #12 CILP (ENSG00000138615) #13 PARP16 (ENSG00000138617) #14 IGDCC3 (ENSG00000174498) #15 IGDCC4 (ENSG00000103742) #16 DPP8 (ENSG00000074603) #17 HACD3 (ENSG00000074696) #18 INTS14 (ENSG00000138614) #19 SLC24A1 (ENSG00000074621) #20 DENND4A (ENSG00000174485) #21 RAB11A (ENSG00000103769) #22 MEGF11 (ENSG00000157890) #23 DIS3L (ENSG00000166938) #24 TIPIN (ENSG00000075131) #25 MAP2K1 (ENSG00000169032) #28 SNAPC5 (ENSG00000174446) #30 RPL4 (ENSG00000174444) ##31 ZWILCH (ENSG00000174442) #32 LCTL (ENSG00000188501) #33 SMAD6 (ENSG00000137834) #34 SMAD3 (ENSG00000166949) #37 AAGAB (ENSG00000103591) IQCH (ENSG00000103599) C15orf61 (ENSG00000189227) MAP2K5 (ENSG00000137764) SKOR1 (ENSG00000188779) Gorilla DUPLICATION Gorilla MODERN SPECIES 6 SLC51B (ENSGGOG00000015637) #7 RASL12 (ENSGGOG00000024110) #8 UBAP1L (ENSGGOG00000038121) #10 PDCD7 (ENSGGOG00000005814) #11 CLPX (ENSGGOG00000000326) #12 CILP (ENSGGOG00000042968) #13 PARP16 (ENSGGOG00000022851) #14 IGDCC3 (ENSGGOG00000010452) #15 IGDCC4 (ENSGGOG00000010463) #16 DPP8 (ENSGGOG00000012470) #17 HACD3 (ENSGGOG00000022837) #18 INTS14 (ENSGGOG00000003838) #19 SLC24A1 (ENSGGOG00000016389) #20 DENND4A (ENSGGOG00000014870) #21 ENSGGOG00000022841 RAB11A (ENSGGOG00000014252) #22 MEGF11 (ENSGGOG00000000293) #23 DIS3L (ENSGGOG00000001549) #24 TIPIN (ENSGGOG00000000061) #25 ENSGGOG00000024529 #26 MAP2K1 (ENSGGOG00000003687) #28 ENSGGOG00000042752 #29 SNAPC5 (ENSGGOG00000003693) #30 ENSGGOG00000003695 #31 ZWILCH (ENSGGOG00000003703) #32 LCTL (ENSGGOG00000006350) #33 SMAD6 (ENSGGOG00000013002) #34 ENSGGOG00000038329 #35 ENSGGOG00000012045 #36 ENSGGOG00000004714 IQCH (ENSGGOG00000004722) Gorilla DUPLICATION Gorilla MODERN SPECIES 1 ALDH18A1 (ENSGGOG00000012491) ENSGGOG00000010457 PDLIM1 (ENSGGOG00000014381) ACSM6 (ENSGGOG00000002283) CYP2C8 (ENSGGOG00000000522) CYP2C9 (ENSGGOG00000015433) CYP2C19 (ENSGGOG00000000057) CYP2C18 (ENSGGOG00000007842) HELLS (ENSGGOG00000008103) ENSGGOG00000026937 NOC3L (ENSGGOG00000014038) PLCE1 (ENSGGOG00000007807) ENSGGOG00000004954 ENSGGOG00000039423 SLC35G1 (ENSGGOG00000025811) ENSGGOG00000042755 #22 ENSGGOG00000040835 #22 LGI1 (ENSGGOG00000002245) FRA10AC1 (ENSGGOG00000010770) PDE6C (ENSGGOG00000004416) RBP4 (ENSGGOG00000008167) FFAR4 (ENSGGOG00000004413) CEP55 (ENSGGOG00000003954) MYOF (ENSGGOG00000006659) ENSGGOG00000040568 CYP26A1 (ENSGGOG00000009114) CYP26C1 (ENSGGOG00000009105) EXOC6 (ENSGGOG00000027393) ENSGGOG00000039693 ENSGGOG00000024168 ENSGGOG00000039016 Gorilla MODERN SPECIES 1 KIF11 (ENSGGOG00000011847) ENSGGOG00000039016 ENSGGOG00000024168 ENSGGOG00000039693 EXOC6 (ENSGGOG00000027393) CYP26C1 (ENSGGOG00000009105) CYP26A1 (ENSGGOG00000009114) ENSGGOG00000040568 MYOF (ENSGGOG00000006659) CEP55 (ENSGGOG00000003954) FFAR4 (ENSGGOG00000004413) RBP4 (ENSGGOG00000008167) PDE6C (ENSGGOG00000004416) FRA10AC1 (ENSGGOG00000010770) LGI1 (ENSGGOG00000002245) ENSGGOG00000040835 #22 ENSGGOG00000042755 #22 SLC35G1 (ENSGGOG00000025811) ENSGGOG00000039423 ENSGGOG00000004954 PLCE1 (ENSGGOG00000007807) NOC3L (ENSGGOG00000014038) ENSGGOG00000026937 HELLS (ENSGGOG00000008103) CYP2C18 (ENSGGOG00000007842) CYP2C19 (ENSGGOG00000000057) CYP2C9 (ENSGGOG00000015433) CYP2C8 (ENSGGOG00000000522) ACSM6 (ENSGGOG00000002283) PDLIM1 (ENSGGOG00000014381) ENSGGOG00000010457 Orangutan MODERN SPECIES 6 SLC51B (ENSPPYG00000037628) #7 RASL12 (ENSPPYG00000006560) #8 KBTBD13 (ENSPPYG00000006561) #9 UBAP1L (ENSPPYG00000030696) #10 PDCD7 (ENSPPYG00000006562) #11 CLPX (ENSPPYG00000006563) #12 CILP (ENSPPYG00000006564) #13 PARP16 (ENSPPYG00000006565) #14 IGDCC3 (ENSPPYG00000006566) #15 IGDCC4 (ENSPPYG00000006567) #16 DPP8 (ENSPPYG00000006568) #17 HACD3 (ENSPPYG00000006569) #18 INTS14 (ENSPPYG00000006570) #19 SLC24A1 (ENSPPYG00000006571) #20 DENND4A (ENSPPYG00000006572) #21 RAB11A (ENSPPYG00000006573) #22 MEGF11 (ENSPPYG00000039385) #23 DIS3L (ENSPPYG00000006575) #24 TIPIN (ENSPPYG00000031745) #25 MAP2K1 (ENSPPYG00000006576) #28 ENSPPYG00000032290 SNAPC5 (ENSPPYG00000040277) #30 RPL4 (ENSPPYG00000006578) #31 ZWILCH (ENSPPYG00000006579) #32 LCTL (ENSPPYG00000006580) #33 ENSPPYG00000006581 #34 ENSPPYG00000006582 #36 SMAD3 (ENSPPYG00000006583) #37 AAGAB (ENSPPYG00000006584) IQCH (ENSPPYG00000006585) C15orf61 (ENSPPYG00000006586) Gibbon DUPLICATION Gibbon MODERN SPECIES 21 SLC51B (ENSNLEG00000012610) #7 RASL12 (ENSNLEG00000012613) #8 UBAP1L (ENSNLEG00000012621) #10 PDCD7 (ENSNLEG00000012628) #11 CLPX (ENSNLEG00000012633) #12 CILP (ENSNLEG00000012638) #13 ENSNLEG00000034448 ENSNLEG00000012643 #14 IGDCC3 (ENSNLEG00000012651) #15 IGDCC4 (ENSNLEG00000012668) #16 DPP8 (ENSNLEG00000012689) #17 HACD3 (ENSNLEG00000012725) #18 INTS14 (ENSNLEG00000012745) #19 ENSNLEG00000012767 #20 DENND4A (ENSNLEG00000012772) #21 RAB11A (ENSNLEG00000012853) #22 MEGF11 (ENSNLEG00000012863) #23 DIS3L (ENSNLEG00000012891) #24 TIPIN (ENSNLEG00000012909) #25 MAP2K1 (ENSNLEG00000012913) #28 SNAPC5 (ENSNLEG00000033124) #30 ENSNLEG00000012938 ##31 ZWILCH (ENSNLEG00000012950) #32 LCTL (ENSNLEG00000012956) #33 SMAD6 (ENSNLEG00000032864) #34 ENSNLEG00000028836 #36 SMAD3 (ENSNLEG00000012983) #37 AAGAB (ENSNLEG00000013006) IQCH (ENSNLEG00000013025) C15orf61 (ENSNLEG00000013065) MAP2K5 (ENSNLEG00000013066) Gibbon MODERN SPECIES 18 ENSNLEG00000030823 ENSNLEG00000013078 PDLIM1 (ENSNLEG00000013055) ENSNLEG00000031454 ENSNLEG00000027908 ACSM6 (ENSNLEG00000013050) CYP2C8 (ENSNLEG00000013031) ENSNLEG00000013026 CYP2C19 (ENSNLEG00000013002) HELLS (ENSNLEG00000012987) TBC1D12 (ENSNLEG00000012968) NOC3L (ENSNLEG00000012959) PLCE1 (ENSNLEG00000012910) ENSNLEG00000032681 SLC35G1 (ENSNLEG00000029824) ENSNLEG00000034751 #22 LGI1 (ENSNLEG00000012889) FRA10AC1 (ENSNLEG00000012877) PDE6C (ENSNLEG00000012855) ENSNLEG00000012845 RBP4 (ENSNLEG00000012849) CEP55 (ENSNLEG00000032627) MYOF (ENSNLEG00000012741) ENSNLEG00000034323 CYP26A1 (ENSNLEG00000012727) CYP26C1 (ENSNLEG00000012723) EXOC6 (ENSNLEG00000012713) ENSNLEG00000012707 KIF11 (ENSNLEG00000012674) IDE (ENSNLEG00000012631) MARCHF5 (ENSNLEG00000012617) Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Rhinopithecus ANCESTRAL SPECIES 49 ENSGT00390000017828 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Black snub-nosed monkey MODERN SPECIES 1519 ENSRBIG00000028588 #12 CILP (ENSRBIG00000004854) #13 PARP16 (ENSRBIG00000040761) #14 IGDCC3 (ENSRBIG00000032739) #15 IGDCC4 (ENSRBIG00000024016) #16 DPP8 (ENSRBIG00000037591) #17 HACD3 (ENSRBIG00000040553) #18 INTS14 (ENSRBIG00000037004) #19 SLC24A1 (ENSRBIG00000029938) #20 DENND4A (ENSRBIG00000043812) #21 RAB11A (ENSRBIG00000035649) #22 MEGF11 (ENSRBIG00000032238) #23 DIS3L (ENSRBIG00000029360) #24 TIPIN (ENSRBIG00000035207) #25 MAP2K1 (ENSRBIG00000031516) #28 SNAPC5 (ENSRBIG00000033556) #30 ENSRBIG00000043139 ##31 ZWILCH (ENSRBIG00000043121) #32 ENSRBIG00000038789 LCTL (ENSRBIG00000034724) #33 ENSRBIG00000044058 #35 SMAD6 (ENSRBIG00000039005) #34 SMAD3 (ENSRBIG00000026650) #37 AAGAB (ENSRBIG00000027896) IQCH (ENSRBIG00000037509) C15orf61 (ENSRBIG00000041044) Golden snub-nosed monkey MODERN SPECIES 1106 RAB11A (ENSRROG00000035305) #22 MEGF11 (ENSRROG00000025747) #23 DIS3L (ENSRROG00000038323) #24 TIPIN (ENSRROG00000004107) #25 MAP2K1 (ENSRROG00000034405) #28 SNAPC5 (ENSRROG00000042536) #30 ENSRROG00000036201 ##31 ZWILCH (ENSRROG00000042656) #32 LCTL (ENSRROG00000040652) #33 ENSRROG00000034499 ENSRROG00000009183 #35 ENSRROG00000043245 #34 ENSRROG00000012076 ENSRROG00000003570 SMAD3 (ENSRROG00000024517) #37 AAGAB (ENSRROG00000042217) Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Vervet Monkey MODERN SPECIES 18 SLC51B (ENSCSAG00000012708) #7 RASL12 (ENSCSAG00000012718) #8 KBTBD13 (ENSCSAG00000019737) #9 UBAP1L (ENSCSAG00000012725) #10 PDCD7 (ENSCSAG00000012751) #11 CLPX (ENSCSAG00000012812) #12 CILP (ENSCSAG00000012835) #13 PARP16 (ENSCSAG00000012842) #14 IGDCC3 (ENSCSAG00000012887) #15 IGDCC4 (ENSCSAG00000012938) #16 DPP8 (ENSCSAG00000012960) #17 HACD3 (ENSCSAG00000012971) #18 INTS14 (ENSCSAG00000012981) #19 SLC24A1 (ENSCSAG00000013003) #20 DENND4A (ENSCSAG00000013032) #21 RAB11A (ENSCSAG00000013038) #22 MEGF11 (ENSCSAG00000013112) #23 DIS3L (ENSCSAG00000013140) #24 TIPIN (ENSCSAG00000013176) #25 MAP2K1 (ENSCSAG00000013191) #28 SNAPC5 (ENSCSAG00000013199) #30 ENSCSAG00000013205 ##31 ZWILCH (ENSCSAG00000013218) #32 LCTL (ENSCSAG00000013237) #33 SMAD6 (ENSCSAG00000013248) #34 ENSCSAG00000013271 ENSCSAG00000019736 SMAD3 (ENSCSAG00000013275) #37 AAGAB (ENSCSAG00000013281) IQCH (ENSCSAG00000013352) C15orf61 (ENSCSAG00000013380) Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Olive baboon MODERN SPECIES 17 SLC51B (ENSPANG00000016744) #7 RASL12 (ENSPANG00000016745) #8 KBTBD13 (ENSPANG00000007309) #9 UBAP1L (ENSPANG00000016746) #10 PDCD7 (ENSPANG00000016743) #11 CLPX (ENSPANG00000016723) #12 CILP (ENSPANG00000016724) #13 PARP16 (ENSPANG00000016725) #14 IGDCC3 (ENSPANG00000016709) #15 IGDCC4 (ENSPANG00000016710) #16 DPP8 (ENSPANG00000016711) #17 HACD3 (ENSPANG00000016698) #18 INTS14 (ENSPANG00000016699) #19 SLC24A1 (ENSPANG00000016700) #20 DENND4A (ENSPANG00000016685) #21 RAB11A (ENSPANG00000016687) #22 MEGF11 (ENSPANG00000016670) #23 ENSPANG00000024144 ENSPANG00000046531 DIS3L (ENSPANG00000016671) #24 TIPIN (ENSPANG00000016672) #25 MAP2K1 (ENSPANG00000016664) #28 SNAPC5 (ENSPANG00000016665) #30 ENSPANG00000016666 ##31 ZWILCH (ENSPANG00000016646) #32 LCTL (ENSPANG00000016647) #33 SMAD6 (ENSPANG00000016648) #34 ENSPANG00000016626 SMAD3 (ENSPANG00000016627) #37 AAGAB (ENSPANG00000016628) IQCH (ENSPANG00000016625) Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00910000147481 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Drill MODERN SPECIES 253 SLC51B (ENSMLEG00000026018) #7 RASL12 (ENSMLEG00000043142) #8 KBTBD13 (ENSMLEG00000023512) #9 UBAP1L (ENSMLEG00000037677) #10 ENSMLEG00000029629 #12 CILP (ENSMLEG00000042537) #13 ENSMLEG00000027861 PARP16 (ENSMLEG00000035171) #14 IGDCC3 (ENSMLEG00000038371) #15 IGDCC4 (ENSMLEG00000028139) #16 DPP8 (ENSMLEG00000039474) #17 HACD3 (ENSMLEG00000005763) #18 INTS14 (ENSMLEG00000027622) #19 SLC24A1 (ENSMLEG00000039031) #20 DENND4A (ENSMLEG00000041101) #21 RAB11A (ENSMLEG00000032505) #22 MEGF11 (ENSMLEG00000042443) #23 ENSMLEG00000039621 DIS3L (ENSMLEG00000034558) #24 TIPIN (ENSMLEG00000031419) #25 MAP2K1 (ENSMLEG00000034124) #28 SNAPC5 (ENSMLEG00000044262) #30 ENSMLEG00000043250 ##31 ZWILCH (ENSMLEG00000031789) #32 LCTL (ENSMLEG00000011538) #33 ENSMLEG00000036582 #35 ENSMLEG00000039010 ENSMLEG00000033311 #36 ENSMLEG00000039372 #36 SMAD3 (ENSMLEG00000032633) #37 AAGAB (ENSMLEG00000042581) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 336 RASL12 (ENSCATG00000042289) #8 KBTBD13 (ENSCATG00000021610) #9 UBAP1L (ENSCATG00000035325) #10 PDCD7 (ENSCATG00000032985) #11 ENSCATG00000041300 #12 CILP (ENSCATG00000007240) #13 ENSCATG00000031421 PARP16 (ENSCATG00000029968) #14 IGDCC3 (ENSCATG00000041269) #15 IGDCC4 (ENSCATG00000041870) #16 DPP8 (ENSCATG00000037927) #17 HACD3 (ENSCATG00000030252) #18 INTS14 (ENSCATG00000039488) #19 SLC24A1 (ENSCATG00000034684) #20 DENND4A (ENSCATG00000030001) #21 RAB11A (ENSCATG00000034739) #22 MEGF11 (ENSCATG00000032543) #23 DIS3L (ENSCATG00000044661) #24 TIPIN (ENSCATG00000040328) #25 MAP2K1 (ENSCATG00000038127) #28 SNAPC5 (ENSCATG00000029571) #30 ENSCATG00000031544 ##31 ZWILCH (ENSCATG00000036836) #32 LCTL (ENSCATG00000033622) #33 ENSCATG00000019079 #35 SMAD6 (ENSCATG00000002013) #34 ENSCATG00000035445 ENSCATG00000000879 SMAD3 (ENSCATG00000009733) #37 AAGAB (ENSCATG00000043588) IQCH (ENSCATG00000042766) Sooty mangabey MODERN SPECIES 115 ENSCATG00000030821 CYP2C18 (ENSCATG00000040270) CYP2C19 (ENSCATG00000035772) HELLS (ENSCATG00000033830) TBC1D12 (ENSCATG00000040590) ENSCATG00000040576 NOC3L (ENSCATG00000035635) PLCE1 (ENSCATG00000032075) SLC35G1 (ENSCATG00000032972) ENSCATG00000036621 #22 LGI1 (ENSCATG00000032789) FRA10AC1 (ENSCATG00000038055) PDE6C (ENSCATG00000029819) FFAR4 (ENSCATG00000033579) RBP4 (ENSCATG00000036680) CEP55 (ENSCATG00000028663) MYOF (ENSCATG00000041418) ENSCATG00000033716 CYP26C1 (ENSCATG00000039097) EXOC6 (ENSCATG00000035172) ENSCATG00000022006 HHEX (ENSCATG00000042941) KIF11 (ENSCATG00000040149) IDE (ENSCATG00000039886) ENSCATG00000039239 Macaca ANCESTRAL SPECIES 1 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625.c #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a #25 ENSGT00940000153487.b.b.i.a #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147041 #35 ENSGT00940000158146 #34 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Rhesus MODERN SPECIES 17 MTFMT (ENSMMUG00000061537) SLC51B (ENSMMUG00000049468) #7 RASL12 (ENSMMUG00000004029) #8 KBTBD13 (ENSMMUG00000004028) #9 PDCD7 (ENSMMUG00000006297) #11 CLPX (ENSMMUG00000006714) #12 CILP (ENSMMUG00000009659) #13 PARP16 (ENSMMUG00000005749) #14 IGDCC3 (ENSMMUG00000021783) #15 IGDCC4 (ENSMMUG00000021788) #16 DPP8 (ENSMMUG00000015447) #17 HACD3 (ENSMMUG00000015450) #18 INTS14 (ENSMMUG00000008095) #19 SLC24A1 (ENSMMUG00000022059) #20 DENND4A (ENSMMUG00000022056) #21 RAB11A (ENSMMUG00000008006) #22 MEGF11 (ENSMMUG00000008007) #23 DIS3L (ENSMMUG00000003693) #24 TIPIN (ENSMMUG00000003695) #25 MAP2K1 (ENSMMUG00000016840) #28 SNAPC5 (ENSMMUG00000060148) #30 RPL4 (ENSMMUG00000016844) ##31 ZWILCH (ENSMMUG00000029588) #32 LCTL (ENSMMUG00000017447) #33 ENSMMUG00000063378 SMAD6 (ENSMMUG00000019018) #34 ENSMMUG00000057696 SMAD3 (ENSMMUG00000015455) #37 ENSMMUG00000051534 AAGAB (ENSMMUG00000041415) IQCH (ENSMMUG00000015458) Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000047489 CILP (ENSMFAG00000039594) #13 PARP16 (ENSMFAG00000051640) #14 ENSMFAG00000036137 ENSMFAG00000061482 IGDCC3 (ENSMFAG00000041666) #15 IGDCC4 (ENSMFAG00000031165) #16 DPP8 (ENSMFAG00000043661) #17 HACD3 (ENSMFAG00000032102) #18 INTS14 (ENSMFAG00000031689) #19 SLC24A1 (ENSMFAG00000000105) #20 DENND4A (ENSMFAG00000030601) #21 ENSMFAG00000047947 ENSMFAG00000060677 ENSMFAG00000055472 RAB11A (ENSMFAG00000000699) #22 MEGF11 (ENSMFAG00000038247) #23 DIS3L (ENSMFAG00000035628) #24 TIPIN (ENSMFAG00000031924) #25 MAP2K1 (ENSMFAG00000036522) ##28 ENSMFAG00000063036 SNAPC5 (ENSMFAG00000046383) #30 RPL4 (ENSMFAG00000036412) ##31 ZWILCH (ENSMFAG00000036529) #32 LCTL (ENSMFAG00000000458) #33 ENSMFAG00000037066 #35 ENSMFAG00000062655 SMAD3 (ENSMFAG00000001781) #37 AAGAB (ENSMFAG00000040550) IQCH (ENSMFAG00000001124) C15orf61 (ENSMFAG00000053739) Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 77 SLC51B (ENSMNEG00000037631) #7 RASL12 (ENSMNEG00000043863) #8 KBTBD13 (ENSMNEG00000014591) #9 UBAP1L (ENSMNEG00000039075) #10 PDCD7 (ENSMNEG00000033283) #11 ENSMNEG00000030071 #12 CILP (ENSMNEG00000031330) #13 PARP16 (ENSMNEG00000028481) #14 IGDCC3 (ENSMNEG00000043800) #15 IGDCC4 (ENSMNEG00000039603) #16 DPP8 (ENSMNEG00000033598) #17 HACD3 (ENSMNEG00000037877) #18 INTS14 (ENSMNEG00000039516) #19 SLC24A1 (ENSMNEG00000041188) #20 DENND4A (ENSMNEG00000031159) #21 RAB11A (ENSMNEG00000043040) #22 MEGF11 (ENSMNEG00000028540) #23 DIS3L (ENSMNEG00000035066) #24 TIPIN (ENSMNEG00000031947) #25 MAP2K1 (ENSMNEG00000027299) #28 SNAPC5 (ENSMNEG00000032504) #30 ENSMNEG00000027886 ##31 ZWILCH (ENSMNEG00000034955) #32 LCTL (ENSMNEG00000002923) #33 ENSMNEG00000031888 #35 SMAD6 (ENSMNEG00000034598) #34 ENSMNEG00000032567 ENSMNEG00000030486 SMAD3 (ENSMNEG00000033094) #37 AAGAB (ENSMNEG00000040056) IQCH (ENSMNEG00000034386) Pig-tailed macaque MODERN SPECIES 104 ENSMNEG00000040532 CYP2C9 (ENSMNEG00000038926) ENSMNEG00000042327 ENSMNEG00000037980 ENSMNEG00000041232 ENSMNEG00000044889 HELLS (ENSMNEG00000042628) TBC1D12 (ENSMNEG00000042246) ENSMNEG00000021980 NOC3L (ENSMNEG00000027484) PLCE1 (ENSMNEG00000030694) SLC35G1 (ENSMNEG00000043665) ENSMNEG00000033144 #22 LGI1 (ENSMNEG00000036411) FRA10AC1 (ENSMNEG00000040322) PDE6C (ENSMNEG00000040848) FFAR4 (ENSMNEG00000031922) RBP4 (ENSMNEG00000031052) CEP55 (ENSMNEG00000032641) MYOF (ENSMNEG00000013341) ENSMNEG00000044241 ENSMNEG00000030366 CYP26A1 (ENSMNEG00000028946) CYP26C1 (ENSMNEG00000045176) EXOC6 (ENSMNEG00000043219) HHEX (ENSMNEG00000037100) KIF11 (ENSMNEG00000020591) ENSMNEG00000028830 Platyrrhini ANCESTRAL SPECIES 27 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764.g.a.a #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00910000146962 Cebidae ANCESTRAL SPECIES 29 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00940000170330 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00910000146962 Cebidae_a ANCESTRAL SPECIES 39 ENSGT00390000017828 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a.a.a ##31 ENSGT00390000013696 #32 ENSGT00910000147890 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 Bolivian squirrel monkey MODERN SPECIES 179 SLC51B (ENSSBOG00000023480) #7 RASL12 (ENSSBOG00000032264) #8 UBAP1L (ENSSBOG00000026917) #10 PDCD7 (ENSSBOG00000020378) #11 CLPX (ENSSBOG00000023525) #12 CILP (ENSSBOG00000034310) #13 PARP16 (ENSSBOG00000032698) #14 IGDCC3 (ENSSBOG00000030768) #15 IGDCC4 (ENSSBOG00000027481) #16 ENSSBOG00000019694 DPP8 (ENSSBOG00000031844) #17 HACD3 (ENSSBOG00000025352) #18 INTS14 (ENSSBOG00000033678) #19 SLC24A1 (ENSSBOG00000035560) #20 DENND4A (ENSSBOG00000021504) #21 RAB11A (ENSSBOG00000017326) #22 MEGF11 (ENSSBOG00000026335) #23 Capuchin MODERN SPECIES 485 RASL12 (ENSCCAG00000037599) #8 ENSCCAG00000019927 UBAP1L (ENSCCAG00000037075) #10 PDCD7 (ENSCCAG00000026810) #11 ENSCCAG00000028918 #12 CILP (ENSCCAG00000021521) #13 PARP16 (ENSCCAG00000032095) #14 IGDCC3 (ENSCCAG00000029122) #15 IGDCC4 (ENSCCAG00000034061) #16 DPP8 (ENSCCAG00000023015) #17 HACD3 (ENSCCAG00000037841) #18 INTS14 (ENSCCAG00000030079) #19 SLC24A1 (ENSCCAG00000024899) #20 DENND4A (ENSCCAG00000036137) #21 ENSCCAG00000032078 RAB11A (ENSCCAG00000021286) #22 MEGF11 (ENSCCAG00000029113) #23 DIS3L (ENSCCAG00000037964) #24 ENSCCAG00000018227 #28 Marmoset MODERN SPECIES 1 SLC51B (ENSCJAG00000006852) #7 RASL12 (ENSCJAG00000080082) #8 KBTBD13 (ENSCJAG00000023428) #9 UBAP1L (ENSCJAG00000035221) #10 PDCD7 (ENSCJAG00000045698) #11 CLPX (ENSCJAG00000006870) #12 CILP (ENSCJAG00000047691) #13 PARP16 (ENSCJAG00000006929) #14 IGDCC3 (ENSCJAG00000006940) #15 IGDCC4 (ENSCJAG00000006951) #16 DPP8 (ENSCJAG00000006987) #17 HACD3 (ENSCJAG00000007084) #18 INTS14 (ENSCJAG00000007118) #19 SLC24A1 (ENSCJAG00000007180) #20 DENND4A (ENSCJAG00000007209) #21 RAB11A (ENSCJAG00000042037) #22 ENSCJAG00000083582 MEGF11 (ENSCJAG00000007353) #23 DIS3L (ENSCJAG00000007411) #24 ENSCJAG00000085355 MAP2K1 (ENSCJAG00000007460) #28 SNAPC5 (ENSCJAG00000070895) #30 ENSCJAG00000007491 ##31 ZWILCH (ENSCJAG00000007524) #32 LCTL (ENSCJAG00000007558) #33 SMAD6 (ENSCJAG00000044644) #34 SMAD3 (ENSCJAG00000002088) #37 AAGAB (ENSCJAG00000002113) IQCH (ENSCJAG00000002130) ENSCJAG00000051609 ENSCJAG00000073121 Mas night monkey MODERN SPECIES 599 MTFMT (ENSANAG00000030327) SLC51B (ENSANAG00000025993) #7 RASL12 (ENSANAG00000027475) #8 UBAP1L (ENSANAG00000029321) #10 PDCD7 (ENSANAG00000020593) #11 CLPX (ENSANAG00000023812) #12 CILP (ENSANAG00000022242) #13 PARP16 (ENSANAG00000026820) #14 IGDCC3 (ENSANAG00000021787) #15 IGDCC4 (ENSANAG00000026571) #16 DPP8 (ENSANAG00000038141) #17 ENSANAG00000026926 #18 INTS14 (ENSANAG00000038417) #19 SLC24A1 (ENSANAG00000016940) #20 DENND4A (ENSANAG00000037563) #21 RAB11A (ENSANAG00000008429) #22 MEGF11 (ENSANAG00000031211) #23 DIS3L (ENSANAG00000024523) #24 ENSANAG00000030739 #25 MAP2K1 (ENSANAG00000023179) #28 ENSANAG00000023149 #30 ENSANAG00000029866 ##31 ZWILCH (ENSANAG00000037776) #32 LCTL (ENSANAG00000029715) #33 ENSANAG00000038383 IL33 (ENSANAG00000019780) ENSANAG00000033312 KIAA2026 (ENSANAG00000028777) MLANA (ENSANAG00000036926) ERMP1 (ENSANAG00000034115) RIC1 (ENSANAG00000037454) Tarsier MODERN SPECIES 4469 ENSTSYG00000036223 #21 RAB11A (ENSTSYG00000031189) #22 MEGF11 (ENSTSYG00000030711) #23 DIS3L (ENSTSYG00000001936) #24 TIPIN (ENSTSYG00000013892) #25 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Bushbaby MODERN SPECIES 126 RASL12 (ENSOGAG00000010391) #8 KBTBD13 (ENSOGAG00000032677) #9 UBAP1L (ENSOGAG00000026705) #10 PDCD7 (ENSOGAG00000028484) #11 CLPX (ENSOGAG00000013626) #12 CILP (ENSOGAG00000033324) #13 PARP16 (ENSOGAG00000013641) #14 ENSOGAG00000027481 IGDCC3 (ENSOGAG00000013646) #15 IGDCC4 (ENSOGAG00000034827) #16 DPP8 (ENSOGAG00000013651) #17 HACD3 (ENSOGAG00000013661) #18 INTS14 (ENSOGAG00000013667) #19 SLC24A1 (ENSOGAG00000013674) #20 DENND4A (ENSOGAG00000013678) #21 RAB11A (ENSOGAG00000007642) #22 MEGF11 (ENSOGAG00000007644) #23 ENSOGAG00000034665 DIS3L (ENSOGAG00000024086) #24 ENSOGAG00000028488 #25 MAP2K1 (ENSOGAG00000015876) #28 SNAPC5 (ENSOGAG00000015881) #30 ENSOGAG00000015884 ##31 ZWILCH (ENSOGAG00000015886) #32 LCTL (ENSOGAG00000015893) #33 SMAD6 (ENSOGAG00000015387) #34 ENSOGAG00000034467 ENSOGAG00000029245 SMAD3 (ENSOGAG00000014217) #37 AAGAB (ENSOGAG00000014219) IQCH (ENSOGAG00000014224) Lemuriformes ANCESTRAL SPECIES 8 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Mouse lemur MODERN SPECIES 22 UBAP1L (ENSMICG00000034396) #10 PDCD7 (ENSMICG00000034171) #11 CLPX (ENSMICG00000014970) #12 CILP (ENSMICG00000015198) #13 PARP16 (ENSMICG00000004993) #14 IGDCC3 (ENSMICG00000003513) #15 IGDCC4 (ENSMICG00000046639) #16 DPP8 (ENSMICG00000000049) #17 HACD3 (ENSMICG00000003985) #18 INTS14 (ENSMICG00000003990) #19 SLC24A1 (ENSMICG00000003996) #20 ENSMICG00000034025 ENSMICG00000028970 ENSMICG00000044235 DENND4A (ENSMICG00000004000) #21 RAB11A (ENSMICG00000041504) #22 ENSMICG00000035335 MEGF11 (ENSMICG00000004354) #23 DIS3L (ENSMICG00000004374) #24 TIPIN (ENSMICG00000004386) #25 MAP2K1 (ENSMICG00000004393) #28 SNAPC5 (ENSMICG00000004401) #30 RPL4 (ENSMICG00000004419) #31 ZWILCH (ENSMICG00000004429) #32 LCTL (ENSMICG00000004455) #33 SMAD6 (ENSMICG00000035205) #34 SMAD3 (ENSMICG00000006119) #37 AAGAB (ENSMICG00000044554) IQCH (ENSMICG00000006127) ENSMICG00000041604 ENSMICG00000005597 Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00940000170330 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.cb.a #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00910000147890 Greater bamboo lemur MODERN SPECIES 105 APH1B (ENSPSMG00000004224) RAB8B (ENSPSMG00000004246) ENSPSMG00000004263 LACTB (ENSPSMG00000004273) TPM1 (ENSPSMG00000005012) ENSPSMG00000005970 TLN2 (ENSPSMG00000006148) PARP16 (ENSPSMG00000006207) #14 IGDCC3 (ENSPSMG00000006222) #15 IGDCC4 (ENSPSMG00000006239) #16 DPP8 (ENSPSMG00000006379) #17 HACD3 (ENSPSMG00000006624) #18 INTS14 (ENSPSMG00000006782) #19 SLC24A1 (ENSPSMG00000006805) #20 DENND4A (ENSPSMG00000006976) #21 RAB11A (ENSPSMG00000007014) #22 MEGF11 (ENSPSMG00000007120) #23 Coquerels sifaka DUPLICATION Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 863 CLIC2 (ENSPCOG00000012095) RAB39B (ENSPCOG00000013225) VBP1 (ENSPCOG00000019297) BRCC3 (ENSPCOG00000010400) ENSPCOG00000025743 MTCP1 (ENSPCOG00000018892) CMC4 (ENSPCOG00000024860) FUNDC2 (ENSPCOG00000015705) F8 (ENSPCOG00000022504) ENSPCOG00000001067 ENSPCOG00000025344 SMIM9 (ENSPCOG00000024173) MPP1 (ENSPCOG00000006163) DKC1 (ENSPCOG00000026874) ENSPCOG00000015802 #22 GAB3 (ENSPCOG00000023755) Coquerels sifaka MODERN SPECIES 51 ENSPCOG00000016536 #22 ENSPCOG00000012889 SOX2 (ENSPCOG00000012108) ATP11B (ENSPCOG00000009904) DCUN1D1 (ENSPCOG00000026616) MCCC1 (ENSPCOG00000020095) ENSPCOG00000009968 MCF2L2 (ENSPCOG00000023043) ENSPCOG00000025090 ENSPCOG00000025238 KLHL24 (ENSPCOG00000014525) YEATS2 (ENSPCOG00000018918) MAP6D1 (ENSPCOG00000027653) PARL (ENSPCOG00000010637) CYP2AB1 (ENSPCOG00000016717) ABCC5 (ENSPCOG00000025758) Coquerels sifaka MODERN SPECIES 1017 ENSPCOG00000000945 ENSPCOG00000021577 FBLN2 (ENSPCOG00000020624) ENSPCOG00000013542 WNT7A (ENSPCOG00000007560) ENSPCOG00000015463 #22 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Glires ANCESTRAL SPECIES 15 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00950000183167.a.b.a ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000157505 ENSGT00940000158440 Pika MODERN SPECIES 5428 RAB11A (ENSOPRG00000004681) #22 MEGF11 (ENSOPRG00000004700) #23 ENSOPRG00000004753 #24 TIPIN (ENSOPRG00000004809) #25 Rabbit MODERN SPECIES 8 RASL12 (ENSOCUG00000010729) #8 KBTBD13 (ENSOCUG00000022127) #9 UBAP1L (ENSOCUG00000029183) #10 ENSOCUG00000032347 PDCD7 (ENSOCUG00000007292) #11 CLPX (ENSOCUG00000007293) #12 CILP (ENSOCUG00000007302) #13 PARP16 (ENSOCUG00000007306) #14 IGDCC3 (ENSOCUG00000000310) #15 IGDCC4 (ENSOCUG00000000312) #16 DPP8 (ENSOCUG00000011751) #17 HACD3 (ENSOCUG00000007513) #18 INTS14 (ENSOCUG00000007520) #19 ENSOCUG00000027844 #20 DENND4A (ENSOCUG00000007953) #21 RAB11A (ENSOCUG00000014755) #22 MEGF11 (ENSOCUG00000014760) #23 DIS3L (ENSOCUG00000002206) #24 TIPIN (ENSOCUG00000002212) #25 ENSOCUG00000023060 MAP2K1 (ENSOCUG00000008782) #28 SNAPC5 (ENSOCUG00000039231) #30 ENSOCUG00000008794 #31 ZWILCH (ENSOCUG00000008800) #32 LCTL (ENSOCUG00000021771) #33 ENSOCUG00000006134 #34 ENSOCUG00000014186 SMAD3 (ENSOCUG00000029601) #37 ENSOCUG00000039204 AAGAB (ENSOCUG00000006644) IQCH (ENSOCUG00000006647) Rodentia ANCESTRAL SPECIES 3 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Kangaroo rat MODERN SPECIES 330 Mtfmt (ENSDORG00000004684) Slc51b (ENSDORG00000023591) #7 Rasl12 (ENSDORG00000000119) #8 Kbtbd13 (ENSDORG00000024320) #9 Ubap1l (ENSDORG00000024217) #10 Pdcd7 (ENSDORG00000008214) #11 Clpx (ENSDORG00000016116) #12 Cilp (ENSDORG00000014410) #13 Parp16 (ENSDORG00000028265) #14 Igdcc4 (ENSDORG00000015148) #16 Dpp8 (ENSDORG00000009050) #17 Hacd3 (ENSDORG00000009307) #18 Ints14 (ENSDORG00000009309) #19 Slc24a1 (ENSDORG00000007185) #20 Dennd4a (ENSDORG00000002146) #21 ENSDORG00000028034 #22 ENSDORG00000026125 Megf11 (ENSDORG00000001008) #23 Dis3l (ENSDORG00000014909) #24 Tipin (ENSDORG00000028988) #25 Map2k1 (ENSDORG00000001301) #28 Snapc5 (ENSDORG00000030051) #30 Rpl4 (ENSDORG00000016287) #31 Zwilch (ENSDORG00000016288) #32 Lctl (ENSDORG00000016291) #33 Smad6 (ENSDORG00000028234) #34 ENSDORG00000026894 Smad3 (ENSDORG00000029949) #37 ENSDORG00000026611 Iqch (ENSDORG00000006468) 2300009A05Rik (ENSDORG00000028687) Myomorpha ANCESTRAL SPECIES 25 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 45 Pcsk1 (ENSJJAG00000014871) Erap1 (ENSJJAG00000010373) Lnpep (ENSJJAG00000012174) Lix1 (ENSJJAG00000023046) Ghrl (ENSJJAG00000020141) Sec13 (ENSJJAG00000023600) Atp2b2 (ENSJJAG00000009628) Slc6a11 (ENSJJAG00000008690) Slc6a1 (ENSJJAG00000013717) Hrh1 (ENSJJAG00000012905) Atg7 (ENSJJAG00000021264) Vgll4 (ENSJJAG00000017532) Tamm41 (ENSJJAG00000015841) Timp4 (ENSJJAG00000015654) ENSJJAG00000015072 ENSJJAG00000012036 #22 Pparg (ENSJJAG00000023734) ENSJJAG00000002861 ENSJJAG00000015646 Mkrn2os (ENSJJAG00000022652) Mkrn2 (ENSJJAG00000019765) ENSJJAG00000016961 Tmem40 (ENSJJAG00000009444) Cand2 (ENSJJAG00000018247) ENSJJAG00000021233 ENSJJAG00000016695 Ift122 (ENSJJAG00000020288) Rho (ENSJJAG00000022285) ENSJJAG00000014828 Plxnd1 (ENSJJAG00000014069) ENSJJAG00000020659 Lesser Egyptian jerboa MODERN SPECIES 92 Slc51b (ENSJJAG00000017452) #7 Rasl12 (ENSJJAG00000019387) #8 ENSJJAG00000011177 #9 ENSJJAG00000016922 #10 Pdcd7 (ENSJJAG00000012031) #11 Clpx (ENSJJAG00000012714) #12 Cilp (ENSJJAG00000012559) #13 Parp16 (ENSJJAG00000019303) #14 Igdcc3 (ENSJJAG00000010487) #15 Igdcc4 (ENSJJAG00000022092) #16 Dpp8 (ENSJJAG00000018252) #17 Hacd3 (ENSJJAG00000016608) #18 Ints14 (ENSJJAG00000005359) #19 Slc24a1 (ENSJJAG00000009344) #20 ENSJJAG00000012113 #21 ENSJJAG00000015445 #22 Megf11 (ENSJJAG00000023890) #23 ENSJJAG00000019234 Dis3l (ENSJJAG00000016147) #24 Tipin (ENSJJAG00000017947) #25 Map2k1 (ENSJJAG00000021452) #28 Snapc5 (ENSJJAG00000022013) #30 ENSJJAG00000013677 #31 Zwilch (ENSJJAG00000010189) #32 Lctl (ENSJJAG00000013579) #33 Smad6 (ENSJJAG00000019623) #34 Smad3 (ENSJJAG00000021414) #37 ENSJJAG00000018312 Iqch (ENSJJAG00000024416) 2300009A05Rik (ENSJJAG00000019436) Map2k5 (ENSJJAG00000024208) Lesser Egyptian jerboa MODERN SPECIES 96 Arhgef38 (ENSJJAG00000014797) ENSJJAG00000015299 Gstcd (ENSJJAG00000021904) Npnt (ENSJJAG00000007539) ENSJJAG00000014460 Aimp1 (ENSJJAG00000016873) Gimd1 (ENSJJAG00000017692) Lrp12 (ENSJJAG00000020477) Dpys (ENSJJAG00000008928) Dcstamp (ENSJJAG00000011201) Rims2 (ENSJJAG00000013990) ENSJJAG00000000607 ENSJJAG00000001990 Slc25a32 (ENSJJAG00000001066) ENSJJAG00000007630 ENSJJAG00000009949 #22 Fzd6 (ENSJJAG00000012386) Baalc (ENSJJAG00000016925) Atp6v1c1 (ENSJJAG00000016526) Azin1 (ENSJJAG00000020420) Klf10 (ENSJJAG00000002095) Odf1 (ENSJJAG00000004566) Ubr5 (ENSJJAG00000013619) Rrm2b (ENSJJAG00000015803) Ncald (ENSJJAG00000017643) Grhl2 (ENSJJAG00000021484) Zfp706 (ENSJJAG00000000146) ENSJJAG00000002258 ENSJJAG00000010886 ENSJJAG00000015918 Snx31 (ENSJJAG00000018446) Muroidea ANCESTRAL SPECIES 23 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Upper Galilee mountains blind mole rat MODERN SPECIES 955 Slc51b (ENSNGAG00000016122) #7 Rasl12 (ENSNGAG00000019976) #8 ENSNGAG00000011880 #9 Ubap1l (ENSNGAG00000022357) #10 Pdcd7 (ENSNGAG00000018415) #11 Clpx (ENSNGAG00000001488) #12 Cilp (ENSNGAG00000019472) #13 Parp16 (ENSNGAG00000004884) #14 Igdcc3 (ENSNGAG00000012915) #15 Igdcc4 (ENSNGAG00000022064) #16 Dpp8 (ENSNGAG00000019579) #17 Hacd3 (ENSNGAG00000016924) #18 Ints14 (ENSNGAG00000007105) #19 Slc24a1 (ENSNGAG00000010674) #20 ENSNGAG00000022619 #21 Rab11a (ENSNGAG00000013726) #22 Megf11 (ENSNGAG00000011352) #23 Dis3l (ENSNGAG00000017008) #24 Tipin (ENSNGAG00000018237) #25 Map2k1 (ENSNGAG00000006894) #28 Snapc5 (ENSNGAG00000006133) #30 ENSNGAG00000006653 #31 Zwilch (ENSNGAG00000016626) #32 Lctl (ENSNGAG00000012911) #33 Smad6 (ENSNGAG00000021223) #34 ENSNGAG00000022756 Smad3 (ENSNGAG00000023535) #37 ENSNGAG00000010708 Iqch (ENSNGAG00000019505) 2300009A05Rik (ENSNGAG00000004715) Map2k5 (ENSNGAG00000011076) Muroidea_A ANCESTRAL SPECIES 6 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Cricetidae ANCESTRAL SPECIES 4 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Cricetinae ANCESTRAL SPECIES 6 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.kb #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Chinese hamster chok1gshd MODERN SPECIES 284 Slc51b (ENSCGRG00001013856) #7 Rasl12 (ENSCGRG00001015470) #8 Kbtbd13 (ENSCGRG00001012125) #9 Ubap1l (ENSCGRG00001023243) #10 Pdcd7 (ENSCGRG00001011256) #11 Clpx (ENSCGRG00001020872) #12 Cilp (ENSCGRG00001023319) #13 Parp16 (ENSCGRG00001011381) #14 Igdcc3 (ENSCGRG00001015803) #15 Igdcc4 (ENSCGRG00001004819) #16 Dpp8 (ENSCGRG00001024771) #17 Hacd3 (ENSCGRG00001019214) #18 Ints14 (ENSCGRG00001022061) #19 Slc24a1 (ENSCGRG00001023812) #20 Dennd4a (ENSCGRG00001019979) #21 Rab11a (ENSCGRG00001023313) #22 Megf11 (ENSCGRG00001019210) #23 Dis3l (ENSCGRG00001017825) #24 Tipin (ENSCGRG00001018146) #25 Snapc5 (ENSCGRG00001013968) #30 Zwilch (ENSCGRG00001018206) #32 Lctl (ENSCGRG00001017716) #33 Smad6 (ENSCGRG00001002733) #34 Smad3 (ENSCGRG00001013999) #37 Aagab (ENSCGRG00001020082) Iqch (ENSCGRG00001006084) ENSCGRG00001000811 2300009A05Rik (ENSCGRG00001009275) Map2k5 (ENSCGRG00001024707) Skor1 (ENSCGRG00001000300) Pias1 (ENSCGRG00001018818) Golden Hamster MODERN SPECIES 672 Rasl12 (ENSMAUG00000021367) #8 Kbtbd13 (ENSMAUG00000007549) #9 Ubap1l (ENSMAUG00000019477) #10 Pdcd7 (ENSMAUG00000010175) #11 Clpx (ENSMAUG00000018798) #12 ENSMAUG00000009833 Cilp (ENSMAUG00000019346) #13 Parp16 (ENSMAUG00000014432) #14 Igdcc3 (ENSMAUG00000019761) #15 Igdcc4 (ENSMAUG00000021589) #16 Dpp8 (ENSMAUG00000020059) #17 Hacd3 (ENSMAUG00000004278) #18 Ints14 (ENSMAUG00000020937) #19 Slc24a1 (ENSMAUG00000012813) #20 Dennd4a (ENSMAUG00000018527) #21 Rab11a (ENSMAUG00000018551) #22 Megf11 (ENSMAUG00000003129) #23 Dis3l (ENSMAUG00000008265) #24 Tipin (ENSMAUG00000012421) #25 Map2k1 (ENSMAUG00000011379) #28 Snapc5 (ENSMAUG00000008645) #30 Rpl4 (ENSMAUG00000018867) #31 Zwilch (ENSMAUG00000021210) #32 Lctl (ENSMAUG00000009957) #33 Smad6 (ENSMAUG00000009859) #34 Smad3 (ENSMAUG00000022258) #37 Aagab (ENSMAUG00000005383) Iqch (ENSMAUG00000004333) Map2k5 (ENSMAUG00000015370) Skor1 (ENSMAUG00000020780) Pias1 (ENSMAUG00000000785) Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Prairie vole MODERN SPECIES 13 Slc51b (ENSMOCG00000016544) #7 Rasl12 (ENSMOCG00000022051) #8 Kbtbd13 (ENSMOCG00000001263) #9 Ubap1l (ENSMOCG00000021453) #10 Pdcd7 (ENSMOCG00000007159) #11 Clpx (ENSMOCG00000011980) #12 Cilp (ENSMOCG00000022194) #13 Parp16 (ENSMOCG00000014635) #14 Igdcc3 (ENSMOCG00000017628) #15 Igdcc4 (ENSMOCG00000017733) #16 Dpp8 (ENSMOCG00000018103) #17 Hacd3 (ENSMOCG00000004995) #18 Ints14 (ENSMOCG00000020364) #19 Slc24a1 (ENSMOCG00000002968) #20 Dennd4a (ENSMOCG00000008521) #21 Rab11a (ENSMOCG00000021138) #22 Megf11 (ENSMOCG00000003573) #23 Dis3l (ENSMOCG00000005278) #24 Tipin (ENSMOCG00000010343) #25 Map2k1 (ENSMOCG00000013072) #28 Snapc5 (ENSMOCG00000015348) #30 ENSMOCG00000021901 #31 Zwilch (ENSMOCG00000017159) #32 Lctl (ENSMOCG00000004744) #33 Smad6 (ENSMOCG00000014458) #34 Smad3 (ENSMOCG00000018490) #37 Aagab (ENSMOCG00000021340) Iqch (ENSMOCG00000016873) 2300009A05Rik (ENSMOCG00000013991) Map2k5 (ENSMOCG00000022058) Skor1 (ENSMOCG00000018261) Northern American deer mouse DUPLICATION Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 20 Slc51b (ENSPEMG00000030201) #7 Rasl12 (ENSPEMG00000026265) #8 Kbtbd13 (ENSPEMG00000005949) #9 Ubap1l (ENSPEMG00000017986) #10 Pdcd7 (ENSPEMG00000001830) #11 Clpx (ENSPEMG00000021528) #12 Cilp (ENSPEMG00000021273) #13 Parp16 (ENSPEMG00000022071) #14 Igdcc3 (ENSPEMG00000021097) #15 Igdcc4 (ENSPEMG00000020857) #16 Dpp8 (ENSPEMG00000024195) #17 Hacd3 (ENSPEMG00000008076) #18 Ints14 (ENSPEMG00000008550) #19 Slc24a1 (ENSPEMG00000022814) #20 Dennd4a (ENSPEMG00000022452) #21 ENSPEMG00000021125 #22 Megf11 (ENSPEMG00000017797) #23 Dis3l (ENSPEMG00000001213) #24 Tipin (ENSPEMG00000002370) #25 Map2k1 (ENSPEMG00000007282) #28 Snapc5 (ENSPEMG00000007852) #30 Rpl4 (ENSPEMG00000012064) #31 Zwilch (ENSPEMG00000014485) #32 Lctl (ENSPEMG00000016229) #33 Smad6 (ENSPEMG00000017040) #34 Smad3 (ENSPEMG00000028676) #37 Aagab (ENSPEMG00000018465) ENSPEMG00000028831 Iqch (ENSPEMG00000005753) 2300009A05Rik (ENSPEMG00000009306) Map2k5 (ENSPEMG00000010361) Northern American deer mouse MODERN SPECIES 7 Plekhg1 (ENSPEMG00000003381) Mthfd1l (ENSPEMG00000012428) ENSPEMG00000028722 Zbtb2 (ENSPEMG00000028248) Rmnd1 (ENSPEMG00000014544) Armt1 (ENSPEMG00000027664) Ccdc170 (ENSPEMG00000018858) ENSPEMG00000028412 Esr1 (ENSPEMG00000012747) ENSPEMG00000000704 ENSPEMG00000029017 ENSPEMG00000013933 ENSPEMG00000007014 Myct1 (ENSPEMG00000016041) Vip (ENSPEMG00000007974) ENSPEMG00000005147 #22 Fbxo5 (ENSPEMG00000017534) Mtrf1l (ENSPEMG00000018112) Rgs17 (ENSPEMG00000002088) Oprm1 (ENSPEMG00000013691) Ipcef1 (ENSPEMG00000017460) Cnksr3 (ENSPEMG00000009492) Scaf8 (ENSPEMG00000010531) Tiam2 (ENSPEMG00000019186) Tfb1m (ENSPEMG00000010410) ENSPEMG00000030418 Nox3 (ENSPEMG00000010502) ENSPEMG00000014483 Arid1b (ENSPEMG00000008950) Tmem242 (ENSPEMG00000016796) Zdhhc14 (ENSPEMG00000019121) Northern American deer mouse MODERN SPECIES 21 Garin3 (ENSPEMG00000007819) Itk (ENSPEMG00000014168) Fndc9 (ENSPEMG00000030039) Cyfip2 (ENSPEMG00000013244) Nipal4 (ENSPEMG00000030993) Adam19 (ENSPEMG00000011893) Sox30 (ENSPEMG00000000554) Thg1l (ENSPEMG00000022707) Lsm11 (ENSPEMG00000028614) Clint1 (ENSPEMG00000022779) Ebf1 (ENSPEMG00000022652) Rnf145 (ENSPEMG00000016589) ENSPEMG00000028711 Ublcp1 (ENSPEMG00000014160) Il12b (ENSPEMG00000015420) ENSPEMG00000018217 #22 ENSPEMG00000012981 Adra1b (ENSPEMG00000018698) Ttc1 (ENSPEMG00000018843) Pwwp2a (ENSPEMG00000000774) Fabp6 (ENSPEMG00000004485) Ccnjl (ENSPEMG00000007234) C1qtnf2 (ENSPEMG00000008301) Slu7 (ENSPEMG00000016646) ENSPEMG00000007013 Atp10b (ENSPEMG00000014226) ENSPEMG00000029937 ENSPEMG00000029792 Gabrb2 (ENSPEMG00000017451) Gabra6 (ENSPEMG00000000050) ENSPEMG00000027790 Murinae ANCESTRAL SPECIES 3 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Mus ANCESTRAL SPECIES 4 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Mus_A ANCESTRAL SPECIES 4 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Ryukyu mouse MODERN SPECIES 18 Slc51b (MGP_CAROLIEiJ_G0032361) #7 Rasl12 (MGP_CAROLIEiJ_G0032360) #8 Kbtbd13 (MGP_CAROLIEiJ_G0032359) #9 Ubap1l (MGP_CAROLIEiJ_G0032358) #10 Pdcd7 (MGP_CAROLIEiJ_G0032357) #11 Clpx (MGP_CAROLIEiJ_G0032356) #12 MGP_CAROLIEiJ_G0032355 Parp16 (MGP_CAROLIEiJ_G0032354) #14 Igdcc3 (MGP_CAROLIEiJ_G0032353) #15 Igdcc4 (MGP_CAROLIEiJ_G0032352) #16 Dpp8 (MGP_CAROLIEiJ_G0032351) #17 Hacd3 (MGP_CAROLIEiJ_G0032350) #18 Ints14 (MGP_CAROLIEiJ_G0032349) #19 Slc24a1 (MGP_CAROLIEiJ_G0032348) #20 Dennd4a (MGP_CAROLIEiJ_G0032347) #21 Rab11a (MGP_CAROLIEiJ_G0032346) #22 Megf11 (MGP_CAROLIEiJ_G0032345) #23 Dis3l (MGP_CAROLIEiJ_G0032344) #24 Tipin (MGP_CAROLIEiJ_G0032343) #25 MGP_CAROLIEiJ_G0032342 Map2k1 (MGP_CAROLIEiJ_G0032341) #28 Snapc5 (MGP_CAROLIEiJ_G0032340) #30 Rpl4 (MGP_CAROLIEiJ_G0032339) #31 Zwilch (MGP_CAROLIEiJ_G0032338) #32 Lctl (MGP_CAROLIEiJ_G0032337) #33 Smad6 (MGP_CAROLIEiJ_G0032336) #34 Smad3 (MGP_CAROLIEiJ_G0032335) #37 Aagab (MGP_CAROLIEiJ_G0032334) Iqch (MGP_CAROLIEiJ_G0032333) 2300009A05Rik (MGP_CAROLIEiJ_G0032332) Map2k5 (MGP_CAROLIEiJ_G0032331) Mus_B ANCESTRAL SPECIES 3 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 Mouse MODERN SPECIES 18 Slc51b (ENSMUSG00000053862) #7 Rasl12 (ENSMUSG00000041696) #8 Kbtbd13 (ENSMUSG00000054978) #9 Ubap1l (ENSMUSG00000086228) #10 Pdcd7 (ENSMUSG00000041837) #11 Clpx (ENSMUSG00000015357) #12 Cilp (ENSMUSG00000042254) #13 Parp16 (ENSMUSG00000032392) #14 Igdcc3 (ENSMUSG00000032394) #15 Igdcc4 (ENSMUSG00000032816) #16 Dpp8 (ENSMUSG00000032393) #17 Hacd3 (ENSMUSG00000033629) #18 Ints14 (ENSMUSG00000034263) #19 Slc24a1 (ENSMUSG00000034452) #20 Dennd4a (ENSMUSG00000053641) #21 Rab11a (ENSMUSG00000004771) #22 Megf11 (ENSMUSG00000036466) #23 Dis3l (ENSMUSG00000032396) #24 Tipin (ENSMUSG00000032397) #25 Uchl4 (ENSMUSG00000035337) Map2k1 (ENSMUSG00000004936) #28 Snapc5 (ENSMUSG00000032398) #30 Rpl4 (ENSMUSG00000032399) #31 Zwilch (ENSMUSG00000032400) #32 Lctl (ENSMUSG00000032401) #33 Smad6 (ENSMUSG00000036867) #34 Smad3 (ENSMUSG00000032402) #37 Aagab (ENSMUSG00000037257) Iqch (ENSMUSG00000037801) 2300009A05Rik (ENSMUSG00000032403) Map2k5 (ENSMUSG00000058444) Mus_C ANCESTRAL SPECIES 8 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 Steppe mouse MODERN SPECIES 3365 Kbtbd13 (ENSMSIG00000005647) #9 ENSMSIG00000005605 #10 Pdcd7 (ENSMSIG00000005596) #11 ENSMSIG00000005574 ENSMSIG00000005568 Clpx (ENSMSIG00000005427) #12 Cilp (ENSMSIG00000005391) #13 Parp16 (ENSMSIG00000005362) #14 Igdcc3 (ENSMSIG00000005288) #15 Igdcc4 (ENSMSIG00000005197) #16 Dpp8 (ENSMSIG00000005153) #17 Hacd3 (ENSMSIG00000005101) #18 Ints14 (ENSMSIG00000005077) #19 Slc24a1 (ENSMSIG00000005039) #20 Dennd4a (ENSMSIG00000004975) #21 Rab11a (ENSMSIG00000004938) #22 Megf11 (ENSMSIG00000004481) #23 Dis3l (ENSMSIG00000004353) #24 Tipin (ENSMSIG00000004296) #25 Uchl4 (ENSMSIG00000004289) Map2k1 (ENSMSIG00000004246) #28 Snapc5 (ENSMSIG00000004231) #30 Rpl4 (ENSMSIG00000004124) #31 Zwilch (ENSMSIG00000003872) #32 Lctl (ENSMSIG00000003776) #33 ENSMSIG00000003769 ENSMSIG00000003749 Smad6 (ENSMSIG00000003718) #34 ENSMSIG00000003710 Smad3 (ENSMSIG00000003679) #37 Aagab (ENSMSIG00000003642) spretus MODERN SPECIES 18 Slc51b (MGP_SPRETEiJ_G0033500) #7 Rasl12 (MGP_SPRETEiJ_G0033499) #8 Kbtbd13 (MGP_SPRETEiJ_G0033498) #9 Ubap1l (MGP_SPRETEiJ_G0033497) #10 Pdcd7 (MGP_SPRETEiJ_G0033496) #11 Clpx (MGP_SPRETEiJ_G0033495) #12 Cilp (MGP_SPRETEiJ_G0033494) #13 Parp16 (MGP_SPRETEiJ_G0033493) #14 Igdcc3 (MGP_SPRETEiJ_G0033492) #15 Igdcc4 (MGP_SPRETEiJ_G0033491) #16 Dpp8 (MGP_SPRETEiJ_G0033490) #17 Hacd3 (MGP_SPRETEiJ_G0033489) #18 Ints14 (MGP_SPRETEiJ_G0033488) #19 Slc24a1 (MGP_SPRETEiJ_G0033487) #20 Dennd4a (MGP_SPRETEiJ_G0033486) #21 Rab11a (MGP_SPRETEiJ_G0033485) #22 Megf11 (MGP_SPRETEiJ_G0033484) #23 Dis3l (MGP_SPRETEiJ_G0033483) #24 Tipin (MGP_SPRETEiJ_G0033482) #25 MGP_SPRETEiJ_G0033481 Map2k1 (MGP_SPRETEiJ_G0033480) #28 Snapc5 (MGP_SPRETEiJ_G0033479) #30 Rpl4 (MGP_SPRETEiJ_G0033478) #31 Zwilch (MGP_SPRETEiJ_G0033477) #32 Lctl (MGP_SPRETEiJ_G0033476) #33 Smad6 (MGP_SPRETEiJ_G0033475) #34 Smad3 (MGP_SPRETEiJ_G0033474) #37 Aagab (MGP_SPRETEiJ_G0033473) Iqch (MGP_SPRETEiJ_G0033472) 2300009A05Rik (MGP_SPRETEiJ_G0033471) Map2k5 (MGP_SPRETEiJ_G0033470) Shrew mouse MODERN SPECIES 1 Slc51b (MGP_PahariEiJ_G0015226) #7 Rasl12 (MGP_PahariEiJ_G0015225) #8 Kbtbd13 (MGP_PahariEiJ_G0015224) #9 Ubap1l (MGP_PahariEiJ_G0015223) #10 Pdcd7 (MGP_PahariEiJ_G0015222) #11 Clpx (MGP_PahariEiJ_G0015221) #12 MGP_PahariEiJ_G0015220 Parp16 (MGP_PahariEiJ_G0015219) #14 MGP_PahariEiJ_G0015218 #15 Igdcc4 (MGP_PahariEiJ_G0015217) #16 Dpp8 (MGP_PahariEiJ_G0015216) #17 Hacd3 (MGP_PahariEiJ_G0015215) #18 Ints14 (MGP_PahariEiJ_G0015214) #19 Slc24a1 (MGP_PahariEiJ_G0015213) #20 Dennd4a (MGP_PahariEiJ_G0015212) #21 Rab11a (MGP_PahariEiJ_G0015211) #22 Megf11 (MGP_PahariEiJ_G0015210) #23 Dis3l (MGP_PahariEiJ_G0015209) #24 Tipin (MGP_PahariEiJ_G0015208) #25 Map2k1 (MGP_PahariEiJ_G0015207) #28 Snapc5 (MGP_PahariEiJ_G0015206) #30 Rpl4 (MGP_PahariEiJ_G0015205) #31 Zwilch (MGP_PahariEiJ_G0015204) #32 Smad6 (MGP_PahariEiJ_G0015202) #34 Smad3 (MGP_PahariEiJ_G0015201) #37 Aagab (MGP_PahariEiJ_G0015200) Iqch (MGP_PahariEiJ_G0015199) 2300009A05Rik (MGP_PahariEiJ_G0015198) Map2k5 (MGP_PahariEiJ_G0015197) Skor1 (MGP_PahariEiJ_G0015196) Pias1 (MGP_PahariEiJ_G0015195) Rat DUPLICATION Rat MODERN SPECIES 18 AABR07070456.1 (ENSRNOG00000014383) #9 Ubap1l (ENSRNOG00000050979) #10 Pdcd7 (ENSRNOG00000014340) #11 Clpx (ENSRNOG00000030225) #12 Cilp (ENSRNOG00000029911) #13 Parp16 (ENSRNOG00000029127) #14 ENSRNOG00000063066 Igdcc3 (ENSRNOG00000030800) #15 Igdcc4 (ENSRNOG00000033496) #16 Dpp8 (ENSRNOG00000019105) #17 Hacd3 (ENSRNOG00000030232) #18 Ints14 (ENSRNOG00000012469) #19 Slc24a1 (ENSRNOG00000052051) #20 Dennd4a (ENSRNOG00000011739) #21 LOC120094392 (ENSRNOG00000071140) Rab11a (ENSRNOG00000011302) #22 Megf11 (ENSRNOG00000010634) #23 Dis3l (ENSRNOG00000010537) #24 Tipin (ENSRNOG00000043068) #25 Map2k1 (ENSRNOG00000010176) #28 Rpl4 (ENSRNOG00000009378) #31 Zwilch (ENSRNOG00000009303) #32 Lctl (ENSRNOG00000009193) #33 Smad6 (ENSRNOG00000009173) #34 Smad3 (ENSRNOG00000008620) #37 Aagab (ENSRNOG00000008424) Iqch (ENSRNOG00000008353) C8h15orf61 (ENSRNOG00000008340) AC132740.1 (ENSRNOG00000054780) Map2k5 (ENSRNOG00000007926) Skor1 (ENSRNOG00000013959) Rat MODERN SPECIES 1 Krt13 (ENSRNOG00000014070) Krt36 (ENSRNOG00000031805) Krt35 (ENSRNOG00000013754) Krt32 (ENSRNOG00000013611) Krt31 (ENSRNOG00000030344) Krt34 (ENSRNOG00000051302) Krt33b (ENSRNOG00000068212) Krt33a (ENSRNOG00000062912) Krtap17-1 (ENSRNOG00000042473) Krtap16-1 (ENSRNOG00000070593) Krtap29-1 (ENSRNOG00000067188) LOC100364862 (ENSRNOG00000063867) Krtap31-1 (ENSRNOG00000036838) Krtap31-2 (ENSRNOG00000042736) LOC680428 (ENSRNOG00000042701) ENSRNOG00000066770 #22 LOC100910814 (ENSRNOG00000064993) Krtap9-7 (ENSRNOG00000026803) Krtap4-3 (ENSRNOG00000034110) LOC100909494 (ENSRNOG00000065268) AABR07030464.1 (ENSRNOG00000012973) AC099183.3 (ENSRNOG00000058172) Gm11555 (ENSRNOG00000066540) ENSRNOG00000068861 Krtap2-4 (ENSRNOG00000061130) Krtap2-4l (ENSRNOG00000060847) Krtap2-1 (ENSRNOG00000065269) RGD1561684 (ENSRNOG00000063772) LOC100365588 (ENSRNOG00000053283) Krtap1-3 (ENSRNOG00000052388) Krtap1-1 (ENSRNOG00000012955) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.vb #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 4 PRLHR (ENSHGLG00000009873) CACUL1 (ENSHGLG00000009961) ENSHGLG00000011185 NANOS1 (ENSHGLG00000045577) EIF3A (ENSHGLG00000013260) DENND10 (ENSHGLG00000010220) ENSHGLG00000009711 ENSHGLG00000011210 ENSHGLG00000038210 GRK5 (ENSHGLG00000050923) RGS10 (ENSHGLG00000037265) ENSHGLG00000034213 TIAL1 (ENSHGLG00000013775) ENSHGLG00000012192 BAG3 (ENSHGLG00000013505) ENSHGLG00000042038 #22 INPP5F (ENSHGLG00000009930) ENSHGLG00000011466 SEC23IP (ENSHGLG00000013752) ENSHGLG00000045415 PLPP4 (ENSHGLG00000012927) ENSHGLG00000044013 WDR11 (ENSHGLG00000010871) ENSHGLG00000011201 ENSHGLG00000032507 ENSHGLG00000006514 ENSHGLG00000045128 ENSHGLG00000018201 NSMCE4A (ENSHGLG00000013057) ENSHGLG00000035516 ENSHGLG00000014774 Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000048508 THAP7 (ENSHGLG00000038188) LZTR1 (ENSHGLG00000000653) AIFM3 (ENSHGLG00000001645) CRKL (ENSHGLG00000044151) SNAP29 (ENSHGLG00000047985) ENSHGLG00000033418 ENSHGLG00000001184 ENSHGLG00000017122 CRYBB3 (ENSHGLG00000013224) ENSHGLG00000006116 ENSHGLG00000011538 ENSHGLG00000048899 ENSHGLG00000013506 ENSHGLG00000017402 ENSHGLG00000042210 #22 ASPHD2 (ENSHGLG00000050850) HPS4 (ENSHGLG00000006487) SRRD (ENSHGLG00000007556) TFIP11 (ENSHGLG00000008873) TPST2 (ENSHGLG00000010327) CRYBB1 (ENSHGLG00000010592) CRYBA4 (ENSHGLG00000011408) ENSHGLG00000047034 MN1 (ENSHGLG00000005808) ENSHGLG00000006229 ENSHGLG00000035833 TTC28 (ENSHGLG00000007637) CHEK2 (ENSHGLG00000011056) HSCB (ENSHGLG00000006538) CCDC117 (ENSHGLG00000041095) Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000008881 #8 ENSHGLG00000007567 #9 UBAP1L (ENSHGLG00000005478) #10 PDCD7 (ENSHGLG00000005335) #11 CLPX (ENSHGLG00000008735) #12 CILP (ENSHGLG00000011932) #13 PARP16 (ENSHGLG00000010657) #14 IGDCC3 (ENSHGLG00000006674) #15 IGDCC4 (ENSHGLG00000017462) #16 DPP8 (ENSHGLG00000014997) #17 HACD3 (ENSHGLG00000011870) #18 INTS14 (ENSHGLG00000010722) #19 SLC24A1 (ENSHGLG00000008872) #20 DENND4A (ENSHGLG00000009810) #21 ENSHGLG00000044288 RAB11A (ENSHGLG00000048551) #22 MEGF11 (ENSHGLG00000011012) #23 ENSHGLG00000007770 #24 ENSHGLG00000005971 #25 ENSHGLG00000048822 ENSHGLG00000010036 #28 ENSHGLG00000040904 #30 ENSHGLG00000008054 #31 ZWILCH (ENSHGLG00000016059) #32 LCTL (ENSHGLG00000015669) #33 SMAD6 (ENSHGLG00000008453) #34 SMAD3 (ENSHGLG00000048787) #37 AAGAB (ENSHGLG00000038898) ENSHGLG00000026352 C15orf61 (ENSHGLG00000038870) MAP2K5 (ENSHGLG00000006627) Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.vb #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Guinea pig MODERN SPECIES 101 MYO1E (ENSCPOG00000002570) CCNB2 (ENSCPOG00000026977) RNF111 (ENSCPOG00000010550) SLTM (ENSCPOG00000026109) MINDY2 (ENSCPOG00000002287) CLPX (ENSCPOG00000003391) #12 CILP (ENSCPOG00000036223) #13 PARP16 (ENSCPOG00000025232) #14 IGDCC3 (ENSCPOG00000006751) #15 IGDCC4 (ENSCPOG00000004519) #16 DPP8 (ENSCPOG00000014124) #17 HACD3 (ENSCPOG00000013593) #18 INTS14 (ENSCPOG00000000764) #19 SLC24A1 (ENSCPOG00000013596) #20 DENND4A (ENSCPOG00000013602) #21 RAB11A (ENSCPOG00000037599) #22 MEGF11 (ENSCPOG00000006468) #23 DIS3L (ENSCPOG00000000250) #24 TIPIN (ENSCPOG00000000251) #25 MAP2K1 (ENSCPOG00000003053) #28 RPL4 (ENSCPOG00000003055) #31 ZWILCH (ENSCPOG00000001241) #32 LCTL (ENSCPOG00000001245) #33 ENSCPOG00000026722 ENSCPOG00000003533 ENSCPOG00000013176 ENSCPOG00000015403 Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145.vb #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Long-tailed chinchilla MODERN SPECIES 157 SLC51B (ENSCLAG00000011594) #7 RASL12 (ENSCLAG00000011152) #8 KBTBD13 (ENSCLAG00000018082) #9 UBAP1L (ENSCLAG00000010285) #10 PDCD7 (ENSCLAG00000007922) #11 CLPX (ENSCLAG00000016601) #12 CILP (ENSCLAG00000014495) #13 PARP16 (ENSCLAG00000012092) #14 IGDCC3 (ENSCLAG00000010244) #15 IGDCC4 (ENSCLAG00000007751) #16 DPP8 (ENSCLAG00000014937) #17 HACD3 (ENSCLAG00000010725) #18 INTS14 (ENSCLAG00000009395) #19 SLC24A1 (ENSCLAG00000013073) #20 DENND4A (ENSCLAG00000007003) #21 RAB11A (ENSCLAG00000007435) #22 MEGF11 (ENSCLAG00000013146) #23 DIS3L (ENSCLAG00000005741) #24 TIPIN (ENSCLAG00000004924) #25 MAP2K1 (ENSCLAG00000013042) #28 SNAPC5 (ENSCLAG00000011660) #30 RPL4 (ENSCLAG00000010827) #31 ZWILCH (ENSCLAG00000010124) #32 LCTL (ENSCLAG00000004564) #33 ENSCLAG00000005550 #34 SMAD3 (ENSCLAG00000005027) #37 AAGAB (ENSCLAG00000008364) IQCH (ENSCLAG00000011031) C15orf61 (ENSCLAG00000008894) MAP2K5 (ENSCLAG00000005277) SKOR1 (ENSCLAG00000007488) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 67 ENSODEG00000016276 #10 PDCD7 (ENSODEG00000016758) #11 ENSODEG00000016607 CLPX (ENSODEG00000016361) #12 CILP (ENSODEG00000016085) #13 ENSODEG00000020368 PARP16 (ENSODEG00000016601) #14 IGDCC3 (ENSODEG00000016285) #15 IGDCC4 (ENSODEG00000016455) #16 DPP8 (ENSODEG00000016356) #17 HACD3 (ENSODEG00000016975) #18 INTS14 (ENSODEG00000017006) #19 SLC24A1 (ENSODEG00000016047) #20 ENSODEG00000016544 #21 ENSODEG00000016435 ENSODEG00000016878 #22 MEGF11 (ENSODEG00000015967) #23 DIS3L (ENSODEG00000015811) #24 MAP2K1 (ENSODEG00000016739) #28 ENSODEG00000016495 #31 ZWILCH (ENSODEG00000016374) #32 LCTL (ENSODEG00000016271) #33 ENSODEG00000020317 SMAD6 (ENSODEG00000016272) #34 SMAD3 (ENSODEG00000015739) #37 ENSODEG00000015886 ENSODEG00000020336 IQCH (ENSODEG00000016134) C15orf61 (ENSODEG00000016721) ENSODEG00000016511 MAP2K5 (ENSODEG00000015607) Degu MODERN SPECIES 88 DENND5B (ENSODEG00000004914) ENSODEG00000005420 ENSODEG00000005301 CAPRIN2 (ENSODEG00000005454) ENSODEG00000004763 CAPS2 (ENSODEG00000005006) KCNC2 (ENSODEG00000004528) ENSODEG00000004940 TPH2 (ENSODEG00000005879) TBC1D15 (ENSODEG00000005472) ENSODEG00000019110 TMEM19 (ENSODEG00000007134) THAP2 (ENSODEG00000007099) ENSODEG00000007051 ENSODEG00000006640 ENSODEG00000005318 #22 LGR5 (ENSODEG00000005026) ENSODEG00000005914 PTPRR (ENSODEG00000004892) PTPRB (ENSODEG00000005212) ENSODEG00000004686 ##26 KCNMB4 (ENSODEG00000004677) CNOT2 (ENSODEG00000004532) ENSODEG00000004175 BEST3 (ENSODEG00000004391) LRRC10 (ENSODEG00000004356) FRS2 (ENSODEG00000004174) ENSODEG00000019177 ENSODEG00000005231 ENSODEG00000005050 LYZ (ENSODEG00000004742) Degu MODERN SPECIES 331 ENSODEG00000002423 ENSODEG00000002362 ENSODEG00000002343 #22 ENSODEG00000002260 ENSODEG00000002224 ENSODEG00000002218 Sciuridae ANCESTRAL SPECIES 11 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Eurasian red squirrel MODERN SPECIES 11 KBTBD13 (ENSSVLG00005022826) #9 UBAP1L (ENSSVLG00005022843) #10 PDCD7 (ENSSVLG00005022889) #11 CLPX (ENSSVLG00005022929) #12 CILP (ENSSVLG00005022969) #13 PARP16 (ENSSVLG00005023083) #14 ENSSVLG00005023161 IGDCC3 (ENSSVLG00005023208) #15 IGDCC4 (ENSSVLG00005023281) #16 DPP8 (ENSSVLG00005023347) #17 ENSSVLG00005023642 HACD3 (ENSSVLG00005023708) #18 INTS14 (ENSSVLG00005023820) #19 SLC24A1 (ENSSVLG00005023979) #20 DENND4A (ENSSVLG00005024160) #21 RAB11A (ENSSVLG00005024246) #22 MEGF11 (ENSSVLG00005024351) #23 DIS3L (ENSSVLG00005024622) #24 TIPIN (ENSSVLG00005024668) #25 MAP2K1 (ENSSVLG00005024707) #28 SNAPC5 (ENSSVLG00005024729) #30 ENSSVLG00005024744 #31 ZWILCH (ENSSVLG00005024833) #32 LCTL (ENSSVLG00005024912) #33 SMAD6 (ENSSVLG00005024946) #34 ENSSVLG00005024968 SMAD3 (ENSSVLG00005024991) #37 AAGAB (ENSSVLG00005025018) IQCH (ENSSVLG00005025085) C15orf61 (ENSSVLG00005006592) MAP2K5 (ENSSVLG00005006656) Marmotini ANCESTRAL SPECIES 9 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Alpin marmot MODERN SPECIES 7 ENSMMMG00000007278 #7 RASL12 (ENSMMMG00000007263) #8 KBTBD13 (ENSMMMG00000007256) #9 UBAP1L (ENSMMMG00000007244) #10 CLPX (ENSMMMG00000007193) #12 CILP (ENSMMMG00000007122) #13 PARP16 (ENSMMMG00000007101) #14 IGDCC3 (ENSMMMG00000007025) #15 IGDCC4 (ENSMMMG00000006948) #16 DPP8 (ENSMMMG00000006899) #17 HACD3 (ENSMMMG00000006884) #18 INTS14 (ENSMMMG00000006868) #19 SLC24A1 (ENSMMMG00000006817) #20 DENND4A (ENSMMMG00000006769) #21 ENSMMMG00000006762 RAB11A (ENSMMMG00000006747) #22 MEGF11 (ENSMMMG00000006311) #23 DIS3L (ENSMMMG00000006220) #24 TIPIN (ENSMMMG00000006196) #25 MAP2K1 (ENSMMMG00000006173) #28 SNAPC5 (ENSMMMG00000006163) #30 RPL4 (ENSMMMG00000006109) #31 ENSMMMG00000006104 ZWILCH (ENSMMMG00000006077) #32 LCTL (ENSMMMG00000006061) #33 SMAD6 (ENSMMMG00000006032) #34 ENSMMMG00000006027 SMAD3 (ENSMMMG00000005977) #37 AAGAB (ENSMMMG00000005970) IQCH (ENSMMMG00000005869) ENSMMMG00000005844 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00390000010409 #7 ENSGT00940000160167 #8 ENSGT00940000161629 #9 ENSGT00390000008092.b #10 ENSGT00390000017392 #11 ENSGT00390000017625 #12 ENSGT00390000008152.B.b #13 ENSGT00950000183129.a #14 ENSGT00940000156969 #15 ENSGT00940000159637 #16 ENSGT00940000160717 #17 ENSGT00530000062962.b.a #18 ENSGT00390000009486 #19 ENSGT01030000234532.B.e.b #20 ENSGT00940000155836.B #21 ENSGT00940000154914 #22 ENSGT00940000155333.B #23 ENSGT00530000063106.B #24 ENSGT00390000005764 #25 ENSGT00940000153487.b.b #28 ENSGT00390000010331 #30 ENSGT00390000018145 #31 ENSGT00390000013696 #32 ENSGT00940000157369 #33 ENSGT00940000158146 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 Squirrel MODERN SPECIES 71 RASL12 (ENSSTOG00000024973) #8 KBTBD13 (ENSSTOG00000010131) #9 UBAP1L (ENSSTOG00000019679) #10 PDCD7 (ENSSTOG00000003742) #11 CLPX (ENSSTOG00000003763) #12 CILP (ENSSTOG00000026112) #13 PARP16 (ENSSTOG00000008979) #14 IGDCC3 (ENSSTOG00000023391) #15 IGDCC4 (ENSSTOG00000002189) #16 DPP8 (ENSSTOG00000002203) #17 ENSSTOG00000025872 HACD3 (ENSSTOG00000002211) #18 INTS14 (ENSSTOG00000002217) #19 SLC24A1 (ENSSTOG00000002228) #20 DENND4A (ENSSTOG00000026966) #21 RAB11A (ENSSTOG00000015255) #22 MEGF11 (ENSSTOG00000015258) #23 DIS3L (ENSSTOG00000009158) #24 TIPIN (ENSSTOG00000009182) #25 MAP2K1 (ENSSTOG00000009190) #28 SNAPC5 (ENSSTOG00000009201) #30 RPL4 (ENSSTOG00000009221) #31 ZWILCH (ENSSTOG00000009607) #32 LCTL (ENSSTOG00000028073) #33 SMAD6 (ENSSTOG00000000696) #34 SMAD3 (ENSSTOG00000010286) #37 AAGAB (ENSSTOG00000010291) IQCH (ENSSTOG00000010299) C15orf61 (ENSSTOG00000010312) MAP2K5 (ENSSTOG00000010318) SKOR1 (ENSSTOG00000002675) Arctic ground squirrel MODERN SPECIES 33 SLC51B (ENSUPAG00010000624) #7 RASL12 (ENSUPAG00010000634) #8 KBTBD13 (ENSUPAG00010000664) #9 UBAP1L (ENSUPAG00010000672) #10 PDCD7 (ENSUPAG00010000682) #11 CLPX (ENSUPAG00010000698) #12 CILP (ENSUPAG00010000774) #13 PARP16 (ENSUPAG00010000785) #14 IGDCC3 (ENSUPAG00010000811) #15 IGDCC4 (ENSUPAG00010000872) #16 DPP8 (ENSUPAG00010000912) #17 HACD3 (ENSUPAG00010001090) #18 INTS14 (ENSUPAG00010001105) #19 SLC24A1 (ENSUPAG00010001132) #20 DENND4A (ENSUPAG00010001204) #21 RAB11A (ENSUPAG00010001338) #22 MEGF11 (ENSUPAG00010001370) #23 DIS3L (ENSUPAG00010001911) #24