Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Glires	ANCESTRAL SPECIES	25	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Rodentia	ANCESTRAL SPECIES	17	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Marmotini	ANCESTRAL SPECIES	24	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Alpin marmot	MODERN SPECIES	88	CAPS (ENSMMMG00000019062) #7	VMAC (ENSMMMG00000019061) #8	NDUFA11 (ENSMMMG00000019059) #9	NRTN (ENSMMMG00000019052) #10	DUS3L (ENSMMMG00000019016) #11	LONP1 (ENSMMMG00000018859) #12	HSD11B1L (ENSMMMG00000018842) #13	MICOS13 (ENSMMMG00000018836) #14	SAFB (ENSMMMG00000018807) #15	SAFB2 (ENSMMMG00000018701) #16	ENSMMMG00000018676 #17	ENSMMMG00000018660 #18	KDM4B (ENSMMMG00000018611) #19	UHRF1 (ENSMMMG00000018568) #20	ENSMMMG00000018563 #21	PLIN3 (ENSMMMG00000018498) #22	FEM1A (ENSMMMG00000018489) #23	DPP9 (ENSMMMG00000018462) #24	MYDGF (ENSMMMG00000018460) #25	ENSMMMG00000018426 #26	LRG1 (ENSMMMG00000018424) #27	ENSMMMG00000018410 #28	HDGFL2 (ENSMMMG00000018325) #29	UBXN6 (ENSMMMG00000018303) #30	CHAF1A (ENSMMMG00000018263) #31	SH3GL1 (ENSMMMG00000018246) #32	MPND (ENSMMMG00000018208) #33	STAP2 (ENSMMMG00000018200) #34	FSD1 (ENSMMMG00000018181) #35	SHD (ENSMMMG00000018157) #36	YJU2 (ENSMMMG00000018139) #37
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Arctic ground squirrel	MODERN SPECIES	301	NRTN (ENSUPAG00010023641) #10	DUS3L (ENSUPAG00010023640) #11	PRR22 (ENSUPAG00010023639)	LONP1 (ENSUPAG00010023636) #12	RPL36 (ENSUPAG00010023635)	HSD11B1L (ENSUPAG00010023634) #13	MICOS13 (ENSUPAG00010023633) #14	SAFB (ENSUPAG00010023630) #15	SAFB2 (ENSUPAG00010023625) #16	ENSUPAG00010023624	ZNRF4 (ENSUPAG00010023622)	PTPRS (ENSUPAG00010010260) #17	KDM4B (ENSUPAG00010010101) #19	UHRF1 (ENSUPAG00010010060) #20	ENSUPAG00010010053 #21	PLIN3 (ENSUPAG00010010038) #22	TICAM1 (ENSUPAG00010010031)	FEM1A (ENSUPAG00010010026) #23	DPP9 (ENSUPAG00010009974) #24	MYDGF (ENSUPAG00010009956) #25	TNFAIP8L1 (ENSUPAG00010009951)	SEMA6B (ENSUPAG00010009930) #26	LRG1 (ENSUPAG00010009927) #27	PLIN5 (ENSUPAG00010009919) #28	ENSUPAG00010009913 ##22	HDGFL2 (ENSUPAG00010009901) #29	UBXN6 (ENSUPAG00010009881) #30	CHAF1A (ENSUPAG00010009868) #31	SH3GL1 (ENSUPAG00010009851) #32	MPND (ENSUPAG00010009625) #33	STAP2 (ENSUPAG00010009594) #34
Squirrel	MODERN SPECIES	188	NRTN (ENSSTOG00000009542) #10	DUS3L (ENSSTOG00000025017) #11	PRR22 (ENSSTOG00000025571)	LONP1 (ENSSTOG00000019884) #12	ENSSTOG00000020518	HSD11B1L (ENSSTOG00000027416) #13	MICOS13 (ENSSTOG00000002814) #14	SAFB (ENSSTOG00000002783) #15	ENSSTOG00000002758 #16	ENSSTOG00000029515	ZNRF4 (ENSSTOG00000022733)	PTPRS (ENSSTOG00000028354) #17	KDM4B (ENSSTOG00000022348) #19	UHRF1 (ENSSTOG00000025553) #20	ARRDC5 (ENSSTOG00000027289) #21	PLIN3 (ENSSTOG00000027863) #22	FEM1A (ENSSTOG00000002965) #23	DPP9 (ENSSTOG00000009879) #24	MYDGF (ENSSTOG00000009868) #25	TNFAIP8L1 (ENSSTOG00000009863)	SEMA6B (ENSSTOG00000021893) #26	LRG1 (ENSSTOG00000003007) #27	PLIN5 (ENSSTOG00000022250) #28	ENSSTOG00000030331	HDGFL2 (ENSSTOG00000007383) #29	UBXN6 (ENSSTOG00000014906) #30	CHAF1A (ENSSTOG00000014889) #31	SH3GL1 (ENSSTOG00000008579) #32	MPND (ENSSTOG00000008666) #33	STAP2 (ENSSTOG00000022594) #34	FSD1 (ENSSTOG00000008010) #35
Eurasian red squirrel	MODERN SPECIES	7	NRTN (ENSSVLG00005021968) #10	DUS3L (ENSSVLG00005021792) #11	PRR22 (ENSSVLG00005021755)	LONP1 (ENSSVLG00005021189) #12	ENSSVLG00005021082	HSD11B1L (ENSSVLG00005020980) #13	MICOS13 (ENSSVLG00005020922) #14	SAFB (ENSSVLG00005020852) #15	SAFB2 (ENSSVLG00005020804) #16	ENSSVLG00005020769	ENSSVLG00005020738	PTPRS (ENSSVLG00005020607) #17	KDM4B (ENSSVLG00005020468) #19	UHRF1 (ENSSVLG00005020117) #20	ARRDC5 (ENSSVLG00005019968) #21	PLIN3 (ENSSVLG00005019930) #22	TICAM1 (ENSSVLG00005019910)	FEM1A (ENSSVLG00005019898) #23	DPP9 (ENSSVLG00005019665) #24	MYDGF (ENSSVLG00005019396) #25	TNFAIP8L1 (ENSSVLG00005019332)	SEMA6B (ENSSVLG00005019159) #26	LRG1 (ENSSVLG00005019035) #27	PLIN5 (ENSSVLG00005018954) #28	PLIN4 (ENSSVLG00005018704) ##22	HDGFL2 (ENSSVLG00005018647) #29	UBXN6 (ENSSVLG00005018509) #30	CHAF1A (ENSSVLG00005018270) #31	SH3GL1 (ENSSVLG00005018172) #32	MPND (ENSSVLG00005017709) #33	ENSSVLG00005017600
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Naked mole-rat female	MODERN SPECIES	21	NRTN (ENSHGLG00000014364) #10	DUS3L (ENSHGLG00000013475) #11	PRR22 (ENSHGLG00000043073)	CATSPERD (ENSHGLG00000032633)	LONP1 (ENSHGLG00000013886) #12	ENSHGLG00000013869	MICOS13 (ENSHGLG00000032110) #14	ENSHGLG00000015883 #15	SAFB2 (ENSHGLG00000017442) #16	ENSHGLG00000044379	ENSHGLG00000017464	ENSHGLG00000037010	KDM4B (ENSHGLG00000013802) #19	UHRF1 (ENSHGLG00000015739) #20	ARRDC5 (ENSHGLG00000014076) #21	PLIN3 (ENSHGLG00000050405) #22	FEM1A (ENSHGLG00000041190) #23	DPP9 (ENSHGLG00000006649) #24	MYDGF (ENSHGLG00000006727) #25	TNFAIP8L1 (ENSHGLG00000040405)	SEMA6B (ENSHGLG00000008078) #26	LRG1 (ENSHGLG00000008746) #27	PLIN5 (ENSHGLG00000009083) #28	PLIN4 (ENSHGLG00000035695) ##22	HDGFL2 (ENSHGLG00000010821) #29	UBXN6 (ENSHGLG00000011971) #30	ENSHGLG00000035324	CHAF1A (ENSHGLG00000005439) #31	SH3GL1 (ENSHGLG00000005623) #32	MPND (ENSHGLG00000006669) #33	STAP2 (ENSHGLG00000008727) #34
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000163125	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Guinea pig	MODERN SPECIES	266									LONP1 (ENSCPOG00000022470) #12	RPL36 (ENSCPOG00000022839)	MICOS13 (ENSCPOG00000019813) #14	SAFB (ENSCPOG00000026322) #15	SAFB2 (ENSCPOG00000011394) #16	UHRF1 (ENSCPOG00000013885) #20	ARRDC5 (ENSCPOG00000019363) #21	PLIN3 (ENSCPOG00000035732) #22	TICAM1 (ENSCPOG00000006486)	FEM1A (ENSCPOG00000002697) #23	DPP9 (ENSCPOG00000023894) #24
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00390000012434 #9	ENSGT00950000182993.A.a #10	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Long-tailed chinchilla	MODERN SPECIES	202	CAPS (ENSCLAG00000013758) #7	VMAC (ENSCLAG00000012168) #8	NDUFA11 (ENSCLAG00000008043) #9	DUS3L (ENSCLAG00000008470) #11	PRR22 (ENSCLAG00000009039)	LONP1 (ENSCLAG00000007239) #12	RPL36 (ENSCLAG00000012455)	MICOS13 (ENSCLAG00000009496) #14	SAFB (ENSCLAG00000007734) #15	ENSCLAG00000009742 #16	ENSCLAG00000007870	ENSCLAG00000008007	PTPRS (ENSCLAG00000006868) #17	KDM4B (ENSCLAG00000007020) #19	ARRDC5 (ENSCLAG00000006231) #21	PLIN3 (ENSCLAG00000006302) #22	TICAM1 (ENSCLAG00000017975)	FEM1A (ENSCLAG00000006945) #23	DPP9 (ENSCLAG00000008590) #24	MYDGF (ENSCLAG00000016185) #25	TNFAIP8L1 (ENSCLAG00000009190)	SEMA6B (ENSCLAG00000009399) #26	LRG1 (ENSCLAG00000011801) #27	PLIN5 (ENSCLAG00000015835) #28	HDGFL2 (ENSCLAG00000008598) #29	UBXN6 (ENSCLAG00000010885) #30	CHAF1A (ENSCLAG00000008702) #31	SH3GL1 (ENSCLAG00000006871) #32	MPND (ENSCLAG00000007417) #33	STAP2 (ENSCLAG00000008850) #34	FSD1 (ENSCLAG00000013151) #35
Degu	MODERN SPECIES	91	VMAC (ENSODEG00000014819) #8	NDUFA11 (ENSODEG00000015123) #9	NRTN (ENSODEG00000014997) #10	DUS3L (ENSODEG00000015771) #11	PRR22 (ENSODEG00000015287)	LONP1 (ENSODEG00000015069) #12	ENSODEG00000017182	MICOS13 (ENSODEG00000016327) #14	SAFB (ENSODEG00000014838) #15	SAFB2 (ENSODEG00000014751) #16	ENSODEG00000015112	PTPRS (ENSODEG00000015678) #17	KDM4B (ENSODEG00000014383) #19	UHRF1 (ENSODEG00000015557) #20	ARRDC5 (ENSODEG00000014652) #21	PLIN3 (ENSODEG00000014389) #22	TICAM1 (ENSODEG00000014706)	FEM1A (ENSODEG00000014717) #23	ENSODEG00000014241	DPP9 (ENSODEG00000014408) #24	MYDGF (ENSODEG00000014093) #25	TNFAIP8L1 (ENSODEG00000020424)	SEMA6B (ENSODEG00000016032) #26	PLIN5 (ENSODEG00000014740) #28	PLIN4 (ENSODEG00000015715) ##22	ENSODEG00000015495 #29	UBXN6 (ENSODEG00000015912) #30	CHAF1A (ENSODEG00000015861) #31	SH3GL1 (ENSODEG00000015344) #32	MPND (ENSODEG00000014317) #33	STAP2 (ENSODEG00000015068) #34
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00550000075134 #11	ENSGT00390000016128	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Muroidea	ANCESTRAL SPECIES	32	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00940000162487 #13	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000007212 #8	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000007212 #8	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000007212 #8	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Golden Hamster	MODERN SPECIES	730	Nrtn (ENSMAUG00000001043) #10	Ndufa11 (ENSMAUG00000021572) #9	Vmac (ENSMAUG00000009455) #8	ENSMAUG00000013827 #7	Ranbp3 (ENSMAUG00000011228)	Catsperd (ENSMAUG00000009178)	Lonp1 (ENSMAUG00000013293) #12	ENSMAUG00000018691	Safb2 (ENSMAUG00000011573) #16	Tincr (ENSMAUG00000006706)	Znrf4 (ENSMAUG00000008614)	Ptprs (ENSMAUG00000003364) #17	Kdm4b (ENSMAUG00000022140) #19	Uhrf1 (ENSMAUG00000021640) #20	Arrdc5 (ENSMAUG00000019305) #21	Plin3 (ENSMAUG00000013422) #22	ENSMAUG00000008605 #23	Dpp9 (ENSMAUG00000018726) #24	Mydgf (ENSMAUG00000018887) #25	Tnfaip8l1 (ENSMAUG00000010017)	Sema6b (ENSMAUG00000008147) #26	Lrg1 (ENSMAUG00000013924) #27	Plin5 (ENSMAUG00000021120) #28	ENSMAUG00000002748 #29	Ubxn6 (ENSMAUG00000009388) #30	Chaf1a (ENSMAUG00000011198) #31	Sh3gl1 (ENSMAUG00000010873) #32	Mpnd (ENSMAUG00000021460) #33	Stap2 (ENSMAUG00000008549) #34	Fsd1 (ENSMAUG00000014625) #35	Shd (ENSMAUG00000015964) #36
Chinese hamster chok1gshd	MODERN SPECIES	2	Vmac (ENSCGRG00001023793) #8	ENSCGRG00001021756 #7	Ranbp3 (ENSCGRG00001022677)	Catsperd (ENSCGRG00001010087)	Lonp1 (ENSCGRG00001021835) #12	ENSCGRG00001020793	Safb (ENSCGRG00001002254) #15	Micos13 (ENSCGRG00001016715) #14	Safb2 (ENSCGRG00001015833) #16	Tincr (ENSCGRG00001024474)	Znrf4 (ENSCGRG00001009066)	Ptprs (ENSCGRG00001023963) #17	Kdm4b (ENSCGRG00001010495) #19	Uhrf1 (ENSCGRG00001012088) #20	Arrdc5 (ENSCGRG00001020830) #21	Plin3 (ENSCGRG00001021231) #22	Ticam1 (ENSCGRG00001005336)	ENSCGRG00001010179 #23	Dpp9 (ENSCGRG00001020770) #24	Mydgf (ENSCGRG00001021243) #25	Tnfaip8l1 (ENSCGRG00001008281)	Sema6b (ENSCGRG00001023299) #26	Lrg1 (ENSCGRG00001024126) #27	Plin5 (ENSCGRG00001006081) #28	Plin4 (ENSCGRG00001009471) ##22	Hdgfl2 (ENSCGRG00001012579) #29	Ubxn6 (ENSCGRG00001016075) #30	Chaf1a (ENSCGRG00001022507) #31	Sh3gl1 (ENSCGRG00001023427) #32	Mpnd (ENSCGRG00001015203) #33	Stap2 (ENSCGRG00001004912) #34
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00390000007212 #8	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34	ENSGT00940000159440 #35
Prairie vole	MODERN SPECIES	9	Ptpn5 (ENSMOCG00000002109)	ENSMOCG00000020275	Mrgprx1 (ENSMOCG00000021193)	ENSMOCG00000009273	ENSMOCG00000000883	ENSMOCG00000012949	ENSMOCG00000017120	ENSMOCG00000000184	ENSMOCG00000001550	Svip (ENSMOCG00000012616)	Gas2 (ENSMOCG00000013131)	Fancf (ENSMOCG00000013896)	Slc17a6 (ENSMOCG00000020959)	Ano5 (ENSMOCG00000017702)	Arrdc5 (ENSMOCG00000019187) #21	Plin3 (ENSMOCG00000000153) #22	Ticam1 (ENSMOCG00000001352)	ENSMOCG00000001639 #23	Dpp9 (ENSMOCG00000014863) #24	Mydgf (ENSMOCG00000004213) #25	Tnfaip8l1 (ENSMOCG00000009632)	Sema6b (ENSMOCG00000011179) #26	Lrg1 (ENSMOCG00000017018) #27	Plin5 (ENSMOCG00000021153) #28	Hdgfl2 (ENSMOCG00000020415) #29	Ubxn6 (ENSMOCG00000013954) #30	Chaf1a (ENSMOCG00000020238) #31	ENSMOCG00000020338 #32	Mpnd (ENSMOCG00000017152) #33	Stap2 (ENSMOCG00000022151) #34	Fsd1 (ENSMOCG00000014990) #35
Northern American deer mouse	MODERN SPECIES	14	Ndufa11 (ENSPEMG00000020648) #9	ENSPEMG00000026816	ENSPEMG00000020906 #7	Ranbp3 (ENSPEMG00000020448)	Lonp1 (ENSPEMG00000020753) #12	ENSPEMG00000014036	Micos13 (ENSPEMG00000009993) #14	Safb (ENSPEMG00000020428) #15	Safb2 (ENSPEMG00000016015) #16	Tincr (ENSPEMG00000023023)	Znrf4 (ENSPEMG00000006665)	Ptprs (ENSPEMG00000020799) #17	Kdm4b (ENSPEMG00000021576) #19	Uhrf1 (ENSPEMG00000016633) #20	ENSPEMG00000025270 #21	Plin3 (ENSPEMG00000022494) #22	Ticam1 (ENSPEMG00000026452)	ENSPEMG00000017948 #23	Dpp9 (ENSPEMG00000017445) #24	Mydgf (ENSPEMG00000030525) #25	Tnfaip8l1 (ENSPEMG00000024674)	Sema6b (ENSPEMG00000011380) #26	Lrg1 (ENSPEMG00000014365) #27	Plin5 (ENSPEMG00000020848) #28	Hdgfl2 (ENSPEMG00000024063) #29	Ubxn6 (ENSPEMG00000021305) #30	Chaf1a (ENSPEMG00000009601) #31	Sh3gl1 (ENSPEMG00000018574) #32	Mpnd (ENSPEMG00000015273) #33	Stap2 (ENSPEMG00000017988) #34	Fsd1 (ENSPEMG00000020510) #35
Murinae	ANCESTRAL SPECIES	38	ENSGT00390000007212 #8	ENSGT00940000162442 #7	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Mus	ANCESTRAL SPECIES	16	ENSGT00390000012434 #9	ENSGT00390000007212 #8	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Mus_A	ANCESTRAL SPECIES	10	ENSGT00390000012434.k #9	ENSGT00390000007212 #8	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Mus_B	ANCESTRAL SPECIES	9	ENSGT00390000012434.k #9	ENSGT00390000007212 #8	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000155916 #15	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
Mus_C	ANCESTRAL SPECIES	9	ENSGT00950000182993.A.a #10	ENSGT00390000012434.k #9	ENSGT00390000007212 #8	ENSGT00940000158588	ENSGT00940000162714	ENSGT00530000063553.b.a #12	ENSGT00390000011943.a.a.a.b	ENSGT00390000002629 #14	ENSGT00940000161482 #16	ENSGT01010000222837	ENSGT00940000163061	ENSGT00940000153617.A.b #17	ENSGT00940000159248 #19	ENSGT00390000008296.a #20	ENSGT00510000049183 #21	ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411	ENSGT00940000161210 #23	ENSGT00940000158174 #24	ENSGT00390000000777 #25	ENSGT00390000003488.a.b.a	ENSGT00940000159170 #26	ENSGT00940000162412 #27	ENSGT00950000182920.b.a.a.c.b #28	ENSGT00950000182920.b.a.a.c.a.b.b ##22	ENSGT00940000153942.a.f #29	ENSGT00940000157273 #30	ENSGT00440000034888 #31	ENSGT00940000154737.c #32	ENSGT00940000160191 #33	ENSGT00530000063841.b #34
spretus	MODERN SPECIES	8	Nrtn (MGP_SPRETEiJ_G0022699) #10	Ndufa11 (MGP_SPRETEiJ_G0022698) #9	Vmac (MGP_SPRETEiJ_G0022697) #8	Ranbp3 (MGP_SPRETEiJ_G0022696)	Catsperd (MGP_SPRETEiJ_G0022695)	Lonp1 (MGP_SPRETEiJ_G0022694) #12	MGP_SPRETEiJ_G0022693	Micos13 (MGP_SPRETEiJ_G0022692) #14	MGP_SPRETEiJ_G0022691	Safb2 (MGP_SPRETEiJ_G0022690) #16	Znrf4 (MGP_SPRETEiJ_G0022689)	Ptprs (MGP_SPRETEiJ_G0022688) #17	Kdm4b (MGP_SPRETEiJ_G0022687) #19	Uhrf1 (MGP_SPRETEiJ_G0022686) #20	Arrdc5 (MGP_SPRETEiJ_G0022685) #21	Plin3 (MGP_SPRETEiJ_G0022684) #22	Ticam1 (MGP_SPRETEiJ_G0022683)	Dpp9 (MGP_SPRETEiJ_G0022682) #24	Mydgf (MGP_SPRETEiJ_G0022681) #25	Tnfaip8l1 (MGP_SPRETEiJ_G0022680)	Sema6b (MGP_SPRETEiJ_G0022679) #26	Lrg1 (MGP_SPRETEiJ_G0022678) #27	Plin5 (MGP_SPRETEiJ_G0022677) #28	MGP_SPRETEiJ_G0022676 ##22	Hdgfl2 (MGP_SPRETEiJ_G0022675) #29	Ubxn6 (MGP_SPRETEiJ_G0022674) #30	Chaf1a (MGP_SPRETEiJ_G0022673) #31	Sh3gl1 (MGP_SPRETEiJ_G0022672) #32	Mpnd (MGP_SPRETEiJ_G0022671) #33	Stap2 (MGP_SPRETEiJ_G0022670) #34	Fsd1 (MGP_SPRETEiJ_G0022669) #35
Steppe mouse	MODERN SPECIES	2947									ENSMSIG00000011258 #16	Tincr (ENSMSIG00000011295)	Znrf4 (ENSMSIG00000011305)	Ptprs (ENSMSIG00000011333) #17	Kdm4b (ENSMSIG00000011694) #19	Uhrf1 (ENSMSIG00000011866) #20	Arrdc5 (ENSMSIG00000011961) #21	Plin3 (ENSMSIG00000011976) #22	Ticam1 (ENSMSIG00000011992)	ENSMSIG00000012002 #23	Dpp9 (ENSMSIG00000012019) #24	Mydgf (ENSMSIG00000012037) #25	Tnfaip8l1 (ENSMSIG00000012049)	Sema6b (ENSMSIG00000012056) #26	Lrg1 (ENSMSIG00000012144) #27	Plin5 (ENSMSIG00000012155) #28	Hdgfl2 (ENSMSIG00000012261) #29	Ubxn6 (ENSMSIG00000012300) #30	Chaf1a (ENSMSIG00000012336) #31	Sh3gl1 (ENSMSIG00000012377) #32	Mpnd (ENSMSIG00000012411) #33	ENSMSIG00000012511	Stap2 (ENSMSIG00000012517) #34
Mouse	MODERN SPECIES	8	Ndufa11 (ENSMUSG00000002379) #9	Vmac (ENSMUSG00000054723) #8	Ranbp3 (ENSMUSG00000002372)	Catsperd (ENSMUSG00000040828)	Lonp1 (ENSMUSG00000041168) #12	Rpl36 (ENSMUSG00000057863)	Micos13 (ENSMUSG00000049760) #14	Safb (ENSMUSG00000071054) #15	Safb2 (ENSMUSG00000042625) #16	Tincr (ENSMUSG00000110218)	Znrf4 (ENSMUSG00000044526)	Ptprs (ENSMUSG00000013236) #17	Kdm4b (ENSMUSG00000024201) #19	Uhrf1 (ENSMUSG00000001228) #20	Arrdc5 (ENSMUSG00000073380) #21	Plin3 (ENSMUSG00000024197) #22	Ticam1 (ENSMUSG00000047123)	Fem1a (ENSMUSG00000043683) #23	Dpp9 (ENSMUSG00000001229) #24	Mydgf (ENSMUSG00000019579) #25	Tnfaip8l1 (ENSMUSG00000044469)	Sema6b (ENSMUSG00000001227) #26	Lrg1 (ENSMUSG00000037095) #27	Plin5 (ENSMUSG00000011305) #28	Plin4 (ENSMUSG00000002831) ##22	Hdgfl2 (ENSMUSG00000002833) #29	Ubxn6 (ENSMUSG00000019578) #30	Chaf1a (ENSMUSG00000002835) #31	Sh3gl1 (ENSMUSG00000003200) #32	Mpnd (ENSMUSG00000003199) #33	Stap2 (ENSMUSG00000038781) #34
Ryukyu mouse	MODERN SPECIES	8	Nrtn (MGP_CAROLIEiJ_G0021788) #10	Ndufa11 (MGP_CAROLIEiJ_G0021787) #9	Vmac (MGP_CAROLIEiJ_G0021786) #8	Ranbp3 (MGP_CAROLIEiJ_G0021785)	Catsperd (MGP_CAROLIEiJ_G0021784)	Lonp1 (MGP_CAROLIEiJ_G0021783) #12	MGP_CAROLIEiJ_G0021782	Micos13 (MGP_CAROLIEiJ_G0021781) #14	Safb (MGP_CAROLIEiJ_G0021780) #15	Safb2 (MGP_CAROLIEiJ_G0021779) #16	Znrf4 (MGP_CAROLIEiJ_G0021778)	Ptprs (MGP_CAROLIEiJ_G0021777) #17	Kdm4b (MGP_CAROLIEiJ_G0021776) #19	Uhrf1 (MGP_CAROLIEiJ_G0021775) #20	Arrdc5 (MGP_CAROLIEiJ_G0021774) #21	Plin3 (MGP_CAROLIEiJ_G0021773) #22	Ticam1 (MGP_CAROLIEiJ_G0021772)	MGP_CAROLIEiJ_G0021771 #23	Dpp9 (MGP_CAROLIEiJ_G0021770) #24	Mydgf (MGP_CAROLIEiJ_G0021769) #25	Tnfaip8l1 (MGP_CAROLIEiJ_G0021768)	Sema6b (MGP_CAROLIEiJ_G0021767) #26	Lrg1 (MGP_CAROLIEiJ_G0021766) #27	Plin5 (MGP_CAROLIEiJ_G0021765) #28	MGP_CAROLIEiJ_G0021764 ##22	Hdgfl2 (MGP_CAROLIEiJ_G0021763) #29	Ubxn6 (MGP_CAROLIEiJ_G0021762) #30	Chaf1a (MGP_CAROLIEiJ_G0021761) #31	Sh3gl1 (MGP_CAROLIEiJ_G0021760) #32	Mpnd (MGP_CAROLIEiJ_G0021759) #33	Stap2 (MGP_CAROLIEiJ_G0021758) #34
Shrew mouse	MODERN SPECIES	9	Nrtn (MGP_PahariEiJ_G0020777) #10	Ndufa11 (MGP_PahariEiJ_G0020776) #9	Vmac (MGP_PahariEiJ_G0020775) #8	Ranbp3 (MGP_PahariEiJ_G0020774)	Catsperd (MGP_PahariEiJ_G0020773)	Lonp1 (MGP_PahariEiJ_G0020772) #12	MGP_PahariEiJ_G0020771	Micos13 (MGP_PahariEiJ_G0020770) #14	Safb (MGP_PahariEiJ_G0020769) #15	Safb2 (MGP_PahariEiJ_G0020768) #16	Znrf4 (MGP_PahariEiJ_G0020767)	Ptprs (MGP_PahariEiJ_G0020766) #17	Kdm4b (MGP_PahariEiJ_G0020765) #19	Uhrf1 (MGP_PahariEiJ_G0020764) #20	Arrdc5 (MGP_PahariEiJ_G0020763) #21	Plin3 (MGP_PahariEiJ_G0020762) #22	Ticam1 (MGP_PahariEiJ_G0020761)	MGP_PahariEiJ_G0020760 #23	Dpp9 (MGP_PahariEiJ_G0020759) #24	Mydgf (MGP_PahariEiJ_G0020758) #25	Tnfaip8l1 (MGP_PahariEiJ_G0020757)	Sema6b (MGP_PahariEiJ_G0020756) #26	Lrg1 (MGP_PahariEiJ_G0020755) #27	Plin5 (MGP_PahariEiJ_G0020754) #28	MGP_PahariEiJ_G0020753 ##22	Hdgfl2 (MGP_PahariEiJ_G0020752) #29	Ubxn6 (MGP_PahariEiJ_G0020751) #30	Chaf1a (MGP_PahariEiJ_G0020750) #31	Sh3gl1 (MGP_PahariEiJ_G0020749) #32	Mpnd (MGP_PahariEiJ_G0020748) #33	Stap2 (MGP_PahariEiJ_G0020747) #34
Rat	MODERN SPECIES	12	Cdk1 (ENSRNOG00000000632)	Rhobtb1 (ENSRNOG00000000633)	Tmem26 (ENSRNOG00000027859)	Cabcoco1 (ENSRNOG00000000634)	Arid5b (ENSRNOG00000000635)	Rtkn2 (ENSRNOG00000000636)	Rtkn2 (ENSRNOG00000067849)	Zfp365 (ENSRNOG00000000638)	Ado (ENSRNOG00000070733)	Egr2 (ENSRNOG00000000640)	Nrbf2 (ENSRNOG00000000641)	Jmjd1c (ENSRNOG00000000648)	Reep3 (ENSRNOG00000000645)	Dnal4-ps1 (ENSRNOG00000067902)	Rpl36al-ps5 (ENSRNOG00000032408)	ENSRNOG00000070329 #22	ENSRNOG00000070306	Ctnna3 (ENSRNOG00000000373)	Lrrtm3 (ENSRNOG00000026466)	ENSRNOG00000069858	LOC108349010 (ENSRNOG00000000376)	ENSRNOG00000066776	Dnajc12 (ENSRNOG00000051960)	Sirt1 (ENSRNOG00000051592)	Herc4 (ENSRNOG00000061040)	Mypn (ENSRNOG00000000383)	Atoh7 (ENSRNOG00000000384)	Pbld1 (ENSRNOG00000000386)	Pbld2 (ENSRNOG00000069854)	Ak6 (ENSRNOG00000026813)	Hnrnph3 (ENSRNOG00000048193)
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Ndufa11 (ENSNGAG00000017779) #9	Vmac (ENSNGAG00000016642) #8	Ranbp3 (ENSNGAG00000015130)	Catsperd (ENSNGAG00000021716)	Lonp1 (ENSNGAG00000018118) #12	ENSNGAG00000021002	ENSNGAG00000022750 #13	ENSNGAG00000021672 #14	Safb (ENSNGAG00000019882) #15	ENSNGAG00000018473 #16	Tincr (ENSNGAG00000021324)	Ptprs (ENSNGAG00000019407) #17	Kdm4b (ENSNGAG00000021232) #19	Uhrf1 (ENSNGAG00000022853) #20	Arrdc5 (ENSNGAG00000020666) #21	Plin3 (ENSNGAG00000021889) #22	Ticam1 (ENSNGAG00000014467)	ENSNGAG00000018411 #23	Dpp9 (ENSNGAG00000021967) #24	Mydgf (ENSNGAG00000015445) #25	Tnfaip8l1 (ENSNGAG00000016594)	Sema6b (ENSNGAG00000023267) #26	Lrg1 (ENSNGAG00000020538) #27	Plin5 (ENSNGAG00000023114) #28	ENSNGAG00000022527 ##22	ENSNGAG00000021303 #29	Ubxn6 (ENSNGAG00000020979) #30	Chaf1a (ENSNGAG00000020900) #31	Sh3gl1 (ENSNGAG00000022192) #32	Mpnd (ENSNGAG00000022278) #33	Stap2 (ENSNGAG00000021317) #34
Lesser Egyptian jerboa	MODERN SPECIES	55	Ndufa11 (ENSJJAG00000023264) #9	Vmac (ENSJJAG00000021312) #8	ENSJJAG00000017779 #7	Ranbp3 (ENSJJAG00000007163)	Lonp1 (ENSJJAG00000021237) #12	ENSJJAG00000020144	ENSJJAG00000023960 #14	Safb (ENSJJAG00000009021) #15	ENSJJAG00000015942 #16	Tincr (ENSJJAG00000015733)	Znrf4 (ENSJJAG00000015898)	Ptprs (ENSJJAG00000022069) #17	Kdm4b (ENSJJAG00000014716) #19	Uhrf1 (ENSJJAG00000016105) #20	Arrdc5 (ENSJJAG00000014627) #21	Plin3 (ENSJJAG00000008038) #22	Ticam1 (ENSJJAG00000021374)	ENSJJAG00000000960 #23	Dpp9 (ENSJJAG00000005661) #24	Mydgf (ENSJJAG00000022035) #25	Tnfaip8l1 (ENSJJAG00000000765)	Sema6b (ENSJJAG00000007447) #26	Lrg1 (ENSJJAG00000017118) #27	Plin5 (ENSJJAG00000023502) #28	ENSJJAG00000022653 ##22	Hdgfl2 (ENSJJAG00000017363) #29	Ubxn6 (ENSJJAG00000019017) #30	Chaf1a (ENSJJAG00000023703) #31	Sh3gl1 (ENSJJAG00000023551) #32	Mpnd (ENSJJAG00000011677) #33	Stap2 (ENSJJAG00000019818) #34
Lagomorpha	ANCESTRAL SPECIES	673																ENSGT00950000182920.b.a.a.c.a.b.a #22	ENSGT00940000162411
Pika	MODERN SPECIES	1749																ENSOPRG00000002838 #22	ENSOPRG00000002806
Tree shrew	MODERN SPECIES	83																ENSTBEG00000015596 #22