Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000156095 #22
Gnathostomata	ANCESTRAL SPECIES	68	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136
Euteleostomi	ANCESTRAL SPECIES	31	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT00940000158887	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Sarcopterygii	ANCESTRAL SPECIES	14	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT00970000197574	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000157521.b #37	ENSGT00940000181625	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Tetrapoda	ANCESTRAL SPECIES	6					ENSGT00970000197574	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000157521.b #37	ENSGT00900000142862
Mammalia	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Theria	ANCESTRAL SPECIES	5	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01050000244986.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01050000244986.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Primates	ANCESTRAL SPECIES	13	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01050000244986.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01050000244986.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Catarrhini	ANCESTRAL SPECIES	16	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00390000011365.a #20	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00910000147897
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00390000011365.a #20	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.a.b.l #28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Gibbon	MODERN SPECIES	12	DPP10 (ENSNLEG00000011663) #7	ACTR3 (ENSNLEG00000011619) #8	SLC35F5 (ENSNLEG00000011590) #9	GPR39 (ENSNLEG00000008318) #10	LYPD1 (ENSNLEG00000008321) #11	NCKAP5 (ENSNLEG00000008327) #12	MGAT5 (ENSNLEG00000008354) #13	ENSNLEG00000032873 #14	TMEM163 (ENSNLEG00000008393) #15	ACMSD (ENSNLEG00000008409) #16	CCNT2 (ENSNLEG00000008432) #17	MAP3K19 (ENSNLEG00000008465) #18	RAB3GAP1 (ENSNLEG00000008500) #19	ENSNLEG00000030245 #20	ZRANB3 (ENSNLEG00000008561) #21	R3HDM1 (ENSNLEG00000008622) #22	UBXN4 (ENSNLEG00000008675) #23	LCT (ENSNLEG00000008718) #24	MCM6 (ENSNLEG00000008748) #25	DARS1 (ENSNLEG00000032858) #26	CXCR4 (ENSNLEG00000008873) #27	ENSNLEG00000031448 #28	ENSNLEG00000028168 #29	THSD7B (ENSNLEG00000008876) #30	HNMT (ENSNLEG00000008899) #31	ENSNLEG00000033628 #32	ENSNLEG00000030338 #33	NXPH2 (ENSNLEG00000008920) #34	ENSNLEG00000028194 #35	ENSNLEG00000030102 #36	LRP1B (ENSNLEG00000008924) #37
Hominidae	ANCESTRAL SPECIES	17	ENSGT00680000100037.h	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.a.b.l #28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000164741	ENSGT00390000005140.b.b	ENSGT00390000013989.a	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00910000147954	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.a.b.l #28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Gorilla	MODERN SPECIES	15	ENSGGOG00000042657	ENSGGOG00000036491	ENSGGOG00000037449	GPR39 (ENSGGOG00000014629) #10	LYPD1 (ENSGGOG00000014632) #11	NCKAP5 (ENSGGOG00000014638) #12	MGAT5 (ENSGGOG00000003032) #13	ENSGGOG00000041040	TMEM163 (ENSGGOG00000011041) #15	ACMSD (ENSGGOG00000009672) #16	CCNT2 (ENSGGOG00000040615) #17	MAP3K19 (ENSGGOG00000014556) #18	RAB3GAP1 (ENSGGOG00000015070) #19	ZRANB3 (ENSGGOG00000003782) #21	ENSGGOG00000023113 #20	R3HDM1 (ENSGGOG00000008156) #22	UBXN4 (ENSGGOG00000027757) #23	LCT (ENSGGOG00000002058) #24	MCM6 (ENSGGOG00000010911) #25	DARS1 (ENSGGOG00000007482) #26	CXCR4 (ENSGGOG00000016862) #27	ENSGGOG00000037201 #28	ENSGGOG00000040151 #29	THSD7B (ENSGGOG00000009703) #30	HNMT (ENSGGOG00000011567) #31	SPOPL (ENSGGOG00000016285)	NXPH2 (ENSGGOG00000008363) #34	ENSGGOG00000026916 #35	LRP1B (ENSGGOG00000040868) #37	KYNU (ENSGGOG00000007406)	ARHGAP15 (ENSGGOG00000034982)
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000164741	ENSGT00390000005140.b.b	ENSGT00390000013989.a	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00910000147954	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.a.b.l #28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Human	MODERN SPECIES	11	RAB6D (ENSG00000233087)	MZT2A (ENSG00000173272)	TUBA3D (ENSG00000075886)	CCDC74A (ENSG00000163040)	ANKRD30BL (ENSG00000163046)	GPR39 (ENSG00000183840) #10	LYPD1 (ENSG00000150551) #11	NCKAP5 (ENSG00000176771) #12	MGAT5 (ENSG00000152127) #13	TMEM163 (ENSG00000152128) #15	ACMSD (ENSG00000153086) #16	CCNT2 (ENSG00000082258) #17	MAP3K19 (ENSG00000176601) #18	RAB3GAP1 (ENSG00000115839) #19	ZRANB3 (ENSG00000121988) #21	R3HDM1 (ENSG00000048991) #22	UBXN4 (ENSG00000144224) #23	LCT (ENSG00000115850) #24	MCM6 (ENSG00000076003) #25	DARS1 (ENSG00000115866) #26	CXCR4 (ENSG00000121966) #27	THSD7B (ENSG00000144229) #30	HNMT (ENSG00000150540) #31	SPOPL (ENSG00000144228)	NXPH2 (ENSG00000144227) #34	LRP1B (ENSG00000168702) #37	KYNU (ENSG00000115919)	ARHGAP15 (ENSG00000075884)	GTDC1 (ENSG00000121964)	ZEB2 (ENSG00000169554)	ACVR2A (ENSG00000121989)
Pan	ANCESTRAL SPECIES	12	ENSGT00940000164741	ENSGT00390000005140.b.b	ENSGT00390000013989.a	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00910000147954	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.a.b.l #28	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01090000260061.c.b.lg.b.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00390000007384.c.b #36	ENSGT00390000008033
Chimpanzee	MODERN SPECIES	15	ENSPTRG00000045125	ENSPTRG00000051062	GPR39 (ENSPTRG00000012477) #10	LYPD1 (ENSPTRG00000012479) #11	NCKAP5 (ENSPTRG00000050546) #12	MGAT5 (ENSPTRG00000012485) #13	ENSPTRG00000052860 #14	ENSPTRG00000052878	TMEM163 (ENSPTRG00000012486) #15	ACMSD (ENSPTRG00000012488) #16	CCNT2 (ENSPTRG00000024043) #17	MAP3K19 (ENSPTRG00000012490) #18	RAB3GAP1 (ENSPTRG00000012491) #19	ZRANB3 (ENSPTRG00000012492) #21	ENSPTRG00000046031 #20	R3HDM1 (ENSPTRG00000012494) #22	UBXN4 (ENSPTRG00000012496) #23	LCT (ENSPTRG00000012497) #24	MCM6 (ENSPTRG00000012498) #25	DARS1 (ENSPTRG00000012500) #26	CXCR4 (ENSPTRG00000012501) #27	ENSPTRG00000042775 #28	THSD7B (ENSPTRG00000012502) #30	HNMT (ENSPTRG00000012503) #31	ENSPTRG00000042850	SPOPL (ENSPTRG00000012504)	NXPH2 (ENSPTRG00000012505) #34	ENSPTRG00000052120 #35	ENSPTRG00000042896	LRP1B (ENSPTRG00000012508) #37	ENSPTRG00000048004 #36
Bonobo	MODERN SPECIES	15	FAM168B (ENSPPAG00000000880)	PLEKHB2 (ENSPPAG00000040925)	ENSPPAG00000032321	ENSPPAG00000039115	GPR39 (ENSPPAG00000039943) #10	LYPD1 (ENSPPAG00000029105) #11	NCKAP5 (ENSPPAG00000037197) #12	MGAT5 (ENSPPAG00000032538) #13	ENSPPAG00000036605	ACMSD (ENSPPAG00000039483) #16	CCNT2 (ENSPPAG00000037070) #17	MAP3K19 (ENSPPAG00000040650) #18	RAB3GAP1 (ENSPPAG00000028809) #19	ZRANB3 (ENSPPAG00000029480) #21	ENSPPAG00000039991 #20	R3HDM1 (ENSPPAG00000027858) #22	UBXN4 (ENSPPAG00000041972) #23	LCT (ENSPPAG00000005000) #24	MCM6 (ENSPPAG00000014507) #25	DARS1 (ENSPPAG00000039644) #26	CXCR4 (ENSPPAG00000041523) #27	ENSPPAG00000032080 #28	ENSPPAG00000009775 #29	THSD7B (ENSPPAG00000036421) #30	HNMT (ENSPPAG00000030141) #31	ENSPPAG00000038546	SPOPL (ENSPPAG00000001924)	NXPH2 (ENSPPAG00000039555) #34	ENSPPAG00000040658 #35	ENSPPAG00000041987	LRP1B (ENSPPAG00000003706) #37
Orangutan	MODERN SPECIES	15	DPP10 (ENSPPYG00000012797) #7	ACTR3 (ENSPPYG00000036644) #8	SLC35F5 (ENSPPYG00000012799) #9	GPR39 (ENSPPYG00000012804) #10	LYPD1 (ENSPPYG00000038777) #11	NCKAP5 (ENSPPYG00000012806) #12	MGAT5 (ENSPPYG00000012808) #13	TMEM163 (ENSPPYG00000012809) #15	ENSPPYG00000041744	ACMSD (ENSPPYG00000012810) #16	CCNT2 (ENSPPYG00000012811) #17	MAP3K19 (ENSPPYG00000012812) #18	RAB3GAP1 (ENSPPYG00000012813) #19	ENSPPYG00000012814	ENSPPYG00000040048 #21	R3HDM1 (ENSPPYG00000012815) #22	UBXN4 (ENSPPYG00000012819) #23	LCT (ENSPPYG00000012820) #24	MCM6 (ENSPPYG00000012821) #25	DARS1 (ENSPPYG00000012822) #26	CXCR4 (ENSPPYG00000012823) #27	THSD7B (ENSPPYG00000036773) #30	HNMT (ENSPPYG00000012824) #31	ENSPPYG00000018028	SPOPL (ENSPPYG00000039370)	NXPH2 (ENSPPYG00000031440) #34	LRP1B (ENSPPYG00000012826) #37	KYNU (ENSPPYG00000012827)	ARHGAP15 (ENSPPYG00000012828)	GTDC1 (ENSPPYG00000034543)	ENSPPYG00000031095
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00390000011365.a #20	ENSGT00940000162517.l	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00910000147897
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00390000011365.a #20	ENSGT00940000162517.l	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862.i.a #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Vervet Monkey	MODERN SPECIES	1	ENSCSAG00000016467	ENSCSAG00000018642	ACTR3 (ENSCSAG00000016462) #8	SLC35F5 (ENSCSAG00000016458) #9	GPR39 (ENSCSAG00000018643) #10	LYPD1 (ENSCSAG00000016451) #11	NCKAP5 (ENSCSAG00000016447) #12	MGAT5 (ENSCSAG00000016433) #13	TMEM163 (ENSCSAG00000016424) #15	ACMSD (ENSCSAG00000016419) #16	CCNT2 (ENSCSAG00000016413) #17	MAP3K19 (ENSCSAG00000016399) #18	RAB3GAP1 (ENSCSAG00000016378) #19	ZRANB3 (ENSCSAG00000016368) #21	ENSCSAG00000016361	R3HDM1 (ENSCSAG00000016356) #22	UBXN4 (ENSCSAG00000016344) #23	LCT (ENSCSAG00000016321) #24	MCM6 (ENSCSAG00000016311) #25	DARS1 (ENSCSAG00000016303) #26	CXCR4 (ENSCSAG00000016296) #27	ENSCSAG00000016290 #30	ENSCSAG00000018644	HNMT (ENSCSAG00000016288) #31	SPOPL (ENSCSAG00000016280)	NXPH2 (ENSCSAG00000016269) #34	LRP1B (ENSCSAG00000016246) #37	KYNU (ENSCSAG00000016218)	ARHGAP15 (ENSCSAG00000016210)	GTDC1 (ENSCSAG00000016202)	ZEB2 (ENSCSAG00000016197)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00390000011365.a #20	ENSGT00940000162517.l	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000002862.i.a #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000015060.m.d	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00390000008033
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT01050000244986.a.a.a.a.b.a.b.b.a.b	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00390000008859.b.d.k.b.f	ENSGT00390000002862.i.b #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000154507.g.b #33	ENSGT00390000002862.i.a #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000015060.m.d
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000166898.a.a.b.b.a.a.b.b.b.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT01050000244986.a.a.a.a.b.a.b.b.a.b	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00940000159262 #30	ENSGT00390000008859.b.d.k.b.f	ENSGT00390000002862.i.b #31	ENSGT00390000002862.i.a #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000015060.m.d	ENSGT00940000157521.b #37	ENSGT00390000008033
Rhesus	MODERN SPECIES	3	GPR39 (ENSMMUG00000016115) #10	ENSMMUG00000016960	LYPD1 (ENSMMUG00000058920) #11	ENSMMUG00000045065	NCKAP5 (ENSMMUG00000045491) #12	ENSMMUG00000056889	MGAT5 (ENSMMUG00000010563) #13	TMEM163 (ENSMMUG00000059634) #15	ACMSD (ENSMMUG00000010195) #16	CCNT2 (ENSMMUG00000010196) #17	MAP3K19 (ENSMMUG00000017121) #18	ENSMMUG00000058599	RAB3GAP1 (ENSMMUG00000014630) #19	ZRANB3 (ENSMMUG00000000765) #21	ENSMMUG00000054949	R3HDM1 (ENSMMUG00000009844) #22	UBXN4 (ENSMMUG00000012248) #23	LCT (ENSMMUG00000012250) #24	MCM6 (ENSMMUG00000017486) #25	DARS1 (ENSMMUG00000040854) #26	ENSMMUG00000063101	CXCR4 (ENSMMUG00000011918) #27	ENSMMUG00000061465	THSD7B (ENSMMUG00000017081) #30	ENSMMUG00000042063	HNMT (ENSMMUG00000006918) #31	SPOPL (ENSMMUG00000002560)	NXPH2 (ENSMMUG00000005176) #34	ENSMMUG00000013925	LRP1B (ENSMMUG00000009885) #37	KYNU (ENSMMUG00000021330)
Crab-eating macaque	MODERN SPECIES	3	SLC35F5 (ENSMFAG00000001843) #9	GPR39 (ENSMFAG00000041717) #10	ENSMFAG00000054954	ENSMFAG00000055082	LYPD1 (ENSMFAG00000033924) #11	NCKAP5 (ENSMFAG00000035593) #12	ENSMFAG00000055532	MGAT5 (ENSMFAG00000002058) #13	TMEM163 (ENSMFAG00000004027) #15	ACMSD (ENSMFAG00000001001) #16	CCNT2 (ENSMFAG00000042791) #17	MAP3K19 (ENSMFAG00000043568) #18	RAB3GAP1 (ENSMFAG00000026109) #19	ZRANB3 (ENSMFAG00000034071) #21	ENSMFAG00000055707	R3HDM1 (ENSMFAG00000030331) #22	UBXN4 (ENSMFAG00000002817) #23	LCT (ENSMFAG00000043296) #24	MCM6 (ENSMFAG00000041102) #25	DARS1 (ENSMFAG00000008693) #26	ENSMFAG00000056496	CXCR4 (ENSMFAG00000037063) #27	ENSMFAG00000042200	ENSMFAG00000058697	THSD7B (ENSMFAG00000031342) #30	ENSMFAG00000049120	ENSMFAG00000035962 #31	ENSMFAG00000040453 #31	SPOPL (ENSMFAG00000033909)	NXPH2 (ENSMFAG00000039309) #34	LRP1B (ENSMFAG00000036929) #37
Pig-tailed macaque	MODERN SPECIES	192	ENSMNEG00000018068	ACTR3 (ENSMNEG00000012040) #8	SLC35F5 (ENSMNEG00000028365) #9	GPR39 (ENSMNEG00000038370) #10	LYPD1 (ENSMNEG00000016693) #11	NCKAP5 (ENSMNEG00000040558) #12	ENSMNEG00000042204	MGAT5 (ENSMNEG00000035554) #13	TMEM163 (ENSMNEG00000032280) #15	ACMSD (ENSMNEG00000028900) #16	CCNT2 (ENSMNEG00000042821) #17	MAP3K19 (ENSMNEG00000033333) #18	RAB3GAP1 (ENSMNEG00000031864) #19	ZRANB3 (ENSMNEG00000015978) #21	ENSMNEG00000042994 #20	R3HDM1 (ENSMNEG00000027793) #22	UBXN4 (ENSMNEG00000009382) #23	LCT (ENSMNEG00000041995) #24	MCM6 (ENSMNEG00000030267) #25	DARS1 (ENSMNEG00000028601) #26	CXCR4 (ENSMNEG00000032574) #27	ENSMNEG00000028907 #29	THSD7B (ENSMNEG00000030691) #30	ENSMNEG00000045373	ENSMNEG00000043214 #31	ENSMNEG00000043854 #32	ENSMNEG00000037114 #33	SPOPL (ENSMNEG00000039162)	NXPH2 (ENSMNEG00000042710) #34	ENSMNEG00000007981	ENSMNEG00000019241
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT01050000244986.a.a.a.a.b.a.b.b.a.b	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29	ENSGT00940000159262 #30	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000015060.m.d	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Cercopithecinae_d	ANCESTRAL SPECIES	163	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00910000147620	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29
Drill	MODERN SPECIES	1680	SLC35F5 (ENSMLEG00000042464) #9	GPR39 (ENSMLEG00000031443) #10	ENSMLEG00000039556	LYPD1 (ENSMLEG00000035076) #11	NCKAP5 (ENSMLEG00000028051) #12	ENSMLEG00000039102	MGAT5 (ENSMLEG00000031822) #13	ENSMLEG00000043027	TMEM163 (ENSMLEG00000044365) #15	ACMSD (ENSMLEG00000032474) #16	CCNT2 (ENSMLEG00000044356) #17	MAP3K19 (ENSMLEG00000032802) #18	RAB3GAP1 (ENSMLEG00000043679) #19	ZRANB3 (ENSMLEG00000028200) #21	ENSMLEG00000032050 #20	R3HDM1 (ENSMLEG00000043189) #22	UBXN4 (ENSMLEG00000041150) #23	LCT (ENSMLEG00000031664) #24	MCM6 (ENSMLEG00000043369) #25	DARS1 (ENSMLEG00000010853) #26	CXCR4 (ENSMLEG00000015246) #27	ENSMLEG00000039428 ##28	ENSMLEG00000032696 #29
Sooty mangabey	MODERN SPECIES	156	GPR39 (ENSCATG00000041836) #10	LYPD1 (ENSCATG00000035955) #11	NCKAP5 (ENSCATG00000038828) #12	ENSCATG00000038961	MGAT5 (ENSCATG00000033052) #13	ENSCATG00000037791 #14	TMEM163 (ENSCATG00000038921) #15	ENSCATG00000024289	ACMSD (ENSCATG00000034488) #16	CCNT2 (ENSCATG00000026405) #17	MAP3K19 (ENSCATG00000036468) #18	RAB3GAP1 (ENSCATG00000035248) #19	ZRANB3 (ENSCATG00000041950) #21	ENSCATG00000029602	ENSCATG00000039913 #20	R3HDM1 (ENSCATG00000023642) #22	UBXN4 (ENSCATG00000008333) #23	LCT (ENSCATG00000032713) #24	MCM6 (ENSCATG00000029528) #25	DARS1 (ENSCATG00000038494) #26	CXCR4 (ENSCATG00000010566) #27	ENSCATG00000041113 ##28	ENSCATG00000011087 #29	ENSCATG00000012682	ENSCATG00000021593 #31
Olive baboon	MODERN SPECIES	1	SLC35F5 (ENSPANG00000023058) #9	GPR39 (ENSPANG00000003759) #10	ENSPANG00000035353	LYPD1 (ENSPANG00000018831) #11	NCKAP5 (ENSPANG00000019274) #12	ENSPANG00000006778	MGAT5 (ENSPANG00000018425) #13	TMEM163 (ENSPANG00000005423) #15	ACMSD (ENSPANG00000012836) #16	CCNT2 (ENSPANG00000020314) #17	MAP3K19 (ENSPANG00000000669) #18	ENSPANG00000002725	RAB3GAP1 (ENSPANG00000000668) #19	ZRANB3 (ENSPANG00000007838) #21	ENSPANG00000040035	R3HDM1 (ENSPANG00000026448) #22	UBXN4 (ENSPANG00000010074) #23	LCT (ENSPANG00000015018) #24	MCM6 (ENSPANG00000021001) #25	DARS1 (ENSPANG00000008858) #26	CXCR4 (ENSPANG00000005008) #27	ENSPANG00000046987	THSD7B (ENSPANG00000018339) #30	SPOPL (ENSPANG00000019764)	NXPH2 (ENSPANG00000015734) #34	ENSPANG00000038498	ENSPANG00000018859	LRP1B (ENSPANG00000007101) #37	ENSPANG00000046031	ENSPANG00000039415	ENSPANG00000050765
Rhinopithecus	ANCESTRAL SPECIES	228	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000011864.o.b	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000153434.a.b.b ##28	ENSGT00940000163355 #29
Black snub-nosed monkey	MODERN SPECIES	911	HOOK2 (ENSRBIG00000036323)	PRDX2 (ENSRBIG00000040222)	THSD8 (ENSRBIG00000000299)	RNASEH2A (ENSRBIG00000023554)	ENSRBIG00000040148	MGAT5 (ENSRBIG00000044917) #13	ENSRBIG00000041688 #14	ENSRBIG00000015170	TMEM163 (ENSRBIG00000040158) #15	ACMSD (ENSRBIG00000032023) #16	CCNT2 (ENSRBIG00000033581) #17	MAP3K19 (ENSRBIG00000035927) #18	RAB3GAP1 (ENSRBIG00000043681) #19	ZRANB3 (ENSRBIG00000039852) #21	ENSRBIG00000028792 #20	R3HDM1 (ENSRBIG00000033317) #22	UBXN4 (ENSRBIG00000004771) #23	LCT (ENSRBIG00000039229) #24	MCM6 (ENSRBIG00000038495) #25	DARS1 (ENSRBIG00000001796) #26	CXCR4 (ENSRBIG00000029356) #27	ENSRBIG00000033695 ##28	ENSRBIG00000029012 #29
Golden snub-nosed monkey	MODERN SPECIES	643								MAP1LC3B2 (ENSRROG00000007151)	ACMSD (ENSRROG00000032370) #16	CCNT2 (ENSRROG00000038634) #17	MAP3K19 (ENSRROG00000042370) #18	RAB3GAP1 (ENSRROG00000033477) #19	ENSRROG00000032247	ENSRROG00000045035 #20	ZRANB3 (ENSRROG00000038728) #21	R3HDM1 (ENSRROG00000034534) #22	UBXN4 (ENSRROG00000031101) #23	LCT (ENSRROG00000036958) #24	MCM6 (ENSRROG00000038657) #25	DARS1 (ENSRROG00000037355) #26
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00680000100037.h	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000002748.j	ENSGT00390000006631
Cebidae	ANCESTRAL SPECIES	11	ENSGT00680000100037.g.a.a.a	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000002748.j	ENSGT00390000006631
Marmoset	MODERN SPECIES	18	NCKAP5 (ENSCJAG00000014208) #12	ENSCJAG00000085696	ENSCJAG00000073120	ENSCJAG00000058213	MGAT5 (ENSCJAG00000011518) #13	TMEM163 (ENSCJAG00000011546) #15	ACMSD (ENSCJAG00000011557) #16	CCNT2 (ENSCJAG00000011573) #17	ENSCJAG00000085933	MAP3K19 (ENSCJAG00000011631) #18	ENSCJAG00000086206	RAB3GAP1 (ENSCJAG00000011643) #19	ENSCJAG00000084106	ENSCJAG00000073068	ENSCJAG00000011678 #21	R3HDM1 (ENSCJAG00000011718) #22	ENSCJAG00000071252	ENSCJAG00000076691	UBXN4 (ENSCJAG00000011842) #23	LCT (ENSCJAG00000011870) #24	ENSCJAG00000084854	MCM6 (ENSCJAG00000011898) #25	ENSCJAG00000063781	DARS1 (ENSCJAG00000011967) #26	CXCR4 (ENSCJAG00000012046) #27	ENSCJAG00000076335	ENSCJAG00000069911	THSD7B (ENSCJAG00000012054) #30	ENSCJAG00000063660	HNMT (ENSCJAG00000012109) #31	ENSCJAG00000086160
Cebidae_a	ANCESTRAL SPECIES	27	ENSGT00680000100037.h	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147097 #14	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00390000008527.k.a.d #32	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000002748.j	ENSGT00390000006631
Capuchin	MODERN SPECIES	95	DPP10 (ENSCCAG00000032303) #7	ENSCCAG00000018282	ACTR3 (ENSCCAG00000029825) #8	SLC35F5 (ENSCCAG00000025168) #9	GPR39 (ENSCCAG00000034562) #10	LYPD1 (ENSCCAG00000034237) #11	NCKAP5 (ENSCCAG00000028109) #12	MGAT5 (ENSCCAG00000022086) #13	TMEM163 (ENSCCAG00000029154) #15	ENSCCAG00000003799	ACMSD (ENSCCAG00000032129) #16	CCNT2 (ENSCCAG00000024931) #17	MAP3K19 (ENSCCAG00000026812) #18	RAB3GAP1 (ENSCCAG00000035099) #19	ZRANB3 (ENSCCAG00000012014) #21	R3HDM1 (ENSCCAG00000027199) #22
Bolivian squirrel monkey	MODERN SPECIES	46				CCDC115 (ENSSBOG00000024051)	IMP4 (ENSSBOG00000025841)	PTPN18 (ENSSBOG00000019619)	ENSSBOG00000025558	ENSSBOG00000029770	SMIM39 (ENSSBOG00000021156)	ARHGEF4 (ENSSBOG00000025042)	FAM168B (ENSSBOG00000021230)	ENSSBOG00000024028	PLEKHB2 (ENSSBOG00000026866)	ENSSBOG00000033347 #19	ZRANB3 (ENSSBOG00000021135) #21	R3HDM1 (ENSSBOG00000020389) #22	UBXN4 (ENSSBOG00000032647) #23	LCT (ENSSBOG00000036144) #24	MCM6 (ENSSBOG00000020383) #25	ENSSBOG00000005555	DARS1 (ENSSBOG00000009265) #26	CXCR4 (ENSSBOG00000004406) #27	THSD7B (ENSSBOG00000020495) #30	ENSSBOG00000013560	HNMT (ENSSBOG00000022759) #31	ENSSBOG00000028590 #32	SPOPL (ENSSBOG00000021667)	NXPH2 (ENSSBOG00000035598) #34	LRP1B (ENSSBOG00000032751) #37	ENSSBOG00000021516	KYNU (ENSSBOG00000029002)
Mas night monkey	MODERN SPECIES	1247	ACTR3 (ENSANAG00000030124) #8	SLC35F5 (ENSANAG00000029152) #9	ENSANAG00000036342	GPR39 (ENSANAG00000036901) #10	LYPD1 (ENSANAG00000023563) #11	NCKAP5 (ENSANAG00000030595) #12	ENSANAG00000034286	MGAT5 (ENSANAG00000035860) #13	TMEM163 (ENSANAG00000030205) #15	ENSANAG00000036144	ACMSD (ENSANAG00000033322) #16	CCNT2 (ENSANAG00000004283) #17	MAP3K19 (ENSANAG00000035315) #18	RAB3GAP1 (ENSANAG00000021462) #19	ZRANB3 (ENSANAG00000028768) #21	R3HDM1 (ENSANAG00000035334) #22	ENSANAG00000035751
Tarsier	MODERN SPECIES	1914																ENSTSYG00000009451 #22
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949.c #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949.c #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Lemuriformes_a	ANCESTRAL SPECIES	169		ENSGT00910000147551	ENSGT00940000155065 #8	ENSGT00390000005949.c #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34
Coquerels sifaka	MODERN SPECIES	466		ACTR3 (ENSPCOG00000024400) #8	SLC35F5 (ENSPCOG00000028424) #9	GPR39 (ENSPCOG00000023485) #10	LYPD1 (ENSPCOG00000020233) #11	ENSPCOG00000014180	NCKAP5 (ENSPCOG00000015437) #12	MGAT5 (ENSPCOG00000019388) #13	TMEM163 (ENSPCOG00000003562) #15	ACMSD (ENSPCOG00000009868) #16	CCNT2 (ENSPCOG00000024166) #17	MAP3K19 (ENSPCOG00000013448) #18	RAB3GAP1 (ENSPCOG00000013566) #19	ENSPCOG00000017303	ZRANB3 (ENSPCOG00000003732) #21	R3HDM1 (ENSPCOG00000012698) #22	UBXN4 (ENSPCOG00000023917) #23	LCT (ENSPCOG00000025001) #24	MCM6 (ENSPCOG00000019502) #25	DARS1 (ENSPCOG00000008377) #26	CXCR4 (ENSPCOG00000024213) #27	ENSPCOG00000016824 #31	ENSPCOG00000015638	SPOPL (ENSPCOG00000023942)	NXPH2 (ENSPCOG00000001950) #34	ENSPCOG00000025193	ENSPCOG00000016661
Greater bamboo lemur	MODERN SPECIES	2700																ENSPSMG00000006795 #22
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	5	FLNB (ENSMICG00000014477)	SLMAP (ENSMICG00000013367)	ENSMICG00000046167	DENND6A (ENSMICG00000002018)	ENSMICG00000002015	PDE12 (ENSMICG00000005723)	ENSMICG00000043347	ENSMICG00000027587	DNAH12 (ENSMICG00000005596)	ASB14 (ENSMICG00000005591)	APPL1 (ENSMICG00000005574)	HESX1 (ENSMICG00000010826)	IL17RD (ENSMICG00000001723)	ARHGEF3 (ENSMICG00000011589)	TASOR (ENSMICG00000005072)	ENSMICG00000042655 #22	CCDC66 (ENSMICG00000005065)	ERC2 (ENSMICG00000001005)	WNT5A (ENSMICG00000034489)	LRTM1 (ENSMICG00000042762)	CACNA2D3 (ENSMICG00000012353)	ENSMICG00000044279	ENSMICG00000013353	IL17RB (ENSMICG00000035767)	CHDH (ENSMICG00000017511)	CACNA1D (ENSMICG00000017510)	DCP1A (ENSMICG00000010929)	TKT (ENSMICG00000010917)	PRKCD (ENSMICG00000010903)	RFT1 (ENSMICG00000010892)	ENSMICG00000031620
Mouse lemur	MODERN SPECIES	30	GCA (ENSMICG00000032511)	IFIH1 (ENSMICG00000005405)	FAP (ENSMICG00000005381)	GCG (ENSMICG00000046796)	LYPD1 (ENSMICG00000029863) #11	NCKAP5 (ENSMICG00000035648) #12	MGAT5 (ENSMICG00000015068) #13	TMEM163 (ENSMICG00000000228) #15	ENSMICG00000043132	ACMSD (ENSMICG00000013809) #16	CCNT2 (ENSMICG00000044355) #17	MAP3K19 (ENSMICG00000013841) #18	RAB3GAP1 (ENSMICG00000013854) #19	ENSMICG00000027856	ZRANB3 (ENSMICG00000013893) #21	ENSMICG00000005900 #22	ENSMICG00000014081	UBXN4 (ENSMICG00000012933) #23	LCT (ENSMICG00000012949) #24	MCM6 (ENSMICG00000012968) #25	DARS1 (ENSMICG00000013832) #26	CXCR4 (ENSMICG00000013852) #27	THSD7B (ENSMICG00000047887) #30	HNMT (ENSMICG00000042723) #31	ENSMICG00000036028	NXPH2 (ENSMICG00000045401) #34	ENSMICG00000007371	LRP1B (ENSMICG00000014855) #37	ENSMICG00000017770	GPR39 (ENSMICG00000031291) #10	SLC35F5 (ENSMICG00000010476) #9
Bushbaby	MODERN SPECIES	195				SLC35F5 (ENSOGAG00000016620) #9	GPR39 (ENSOGAG00000011357) #10	LYPD1 (ENSOGAG00000024875) #11	NCKAP5 (ENSOGAG00000029035) #12	MGAT5 (ENSOGAG00000016482) #13	TMEM163 (ENSOGAG00000016488) #15	ACMSD (ENSOGAG00000001854) #16	ENSOGAG00000028207	CCNT2 (ENSOGAG00000016793) #17	MAP3K19 (ENSOGAG00000016799) #18	RAB3GAP1 (ENSOGAG00000013299) #19	ZRANB3 (ENSOGAG00000013307) #21	R3HDM1 (ENSOGAG00000003136) #22	UBXN4 (ENSOGAG00000002877) #23	LCT (ENSOGAG00000002883) #24	MCM6 (ENSOGAG00000008745) #25	DARS1 (ENSOGAG00000005919) #26	CXCR4 (ENSOGAG00000011319) #27	ENSOGAG00000027169	THSD7B (ENSOGAG00000017173) #30	HNMT (ENSOGAG00000006550) #31	SPOPL (ENSOGAG00000015187)	NXPH2 (ENSOGAG00000003113) #34	ENSOGAG00000005855	ENSOGAG00000034729	ENSOGAG00000026964
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Glires	ANCESTRAL SPECIES	14	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Rodentia	ANCESTRAL SPECIES	14	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Rodentia_B	ANCESTRAL SPECIES	41	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30
Myomorpha	ANCESTRAL SPECIES	54	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	150	Mpp7 (ENSJJAG00000004718)	Odad2 (ENSJJAG00000016915)	Mkx (ENSJJAG00000015068)	ENSJJAG00000014857	ENSJJAG00000014119	Kif5b (ENSJJAG00000010864)	ENSJJAG00000008360	ENSJJAG00000003717	Mgat5 (ENSJJAG00000016103) #13	Tmem163 (ENSJJAG00000015561) #15	Acmsd (ENSJJAG00000014846) #16	ENSJJAG00000014495 #17	Map3k19 (ENSJJAG00000004245) #18	Rab3gap1 (ENSJJAG00000021102) #19	ENSJJAG00000018858 #21	ENSJJAG00000018208 #22	ENSJJAG00000017211 #22	Ubxn4 (ENSJJAG00000013631) #23	ENSJJAG00000013167 #24	Mcm6 (ENSJJAG00000010609) #25	Dars (ENSJJAG00000009396) #26	Cxcr4 (ENSJJAG00000005784) #27	Thsd7b (ENSJJAG00000016026) #30	ENSJJAG00000013327
Lesser Egyptian jerboa	MODERN SPECIES	150	Odad2 (ENSJJAG00000016915)	Mkx (ENSJJAG00000015068)	ENSJJAG00000014857	ENSJJAG00000014119	Kif5b (ENSJJAG00000010864)	ENSJJAG00000008360	ENSJJAG00000003717	Mgat5 (ENSJJAG00000016103) #13	Tmem163 (ENSJJAG00000015561) #15	Acmsd (ENSJJAG00000014846) #16	ENSJJAG00000014495 #17	Map3k19 (ENSJJAG00000004245) #18	Rab3gap1 (ENSJJAG00000021102) #19	ENSJJAG00000018858 #21	ENSJJAG00000018208 #22	ENSJJAG00000017211 #22	Ubxn4 (ENSJJAG00000013631) #23	ENSJJAG00000013167 #24	Mcm6 (ENSJJAG00000010609) #25	Dars (ENSJJAG00000009396) #26	Cxcr4 (ENSJJAG00000005784) #27	Thsd7b (ENSJJAG00000016026) #30	ENSJJAG00000013327
Muroidea	ANCESTRAL SPECIES	64	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	783					Gpr39 (ENSNGAG00000010558) #10	Lypd1 (ENSNGAG00000009827) #11	ENSNGAG00000004902 #12	Mgat5 (ENSNGAG00000000378) #13	Tmem163 (ENSNGAG00000016090) #15	Acmsd (ENSNGAG00000015188) #16	ENSNGAG00000013037 #17	Map3k19 (ENSNGAG00000012391) #18	Rab3gap1 (ENSNGAG00000011952) #19	ENSNGAG00000011334	Zranb3 (ENSNGAG00000010584) #21	ENSNGAG00000001313 #22	ENSNGAG00000000937 #22
Upper Galilee mountains blind mole rat	MODERN SPECIES	783				Gpr39 (ENSNGAG00000010558) #10	Lypd1 (ENSNGAG00000009827) #11	ENSNGAG00000004902 #12	Mgat5 (ENSNGAG00000000378) #13	Tmem163 (ENSNGAG00000016090) #15	Acmsd (ENSNGAG00000015188) #16	ENSNGAG00000013037 #17	Map3k19 (ENSNGAG00000012391) #18	Rab3gap1 (ENSNGAG00000011952) #19	ENSNGAG00000011334	Zranb3 (ENSNGAG00000010584) #21	ENSNGAG00000001313 #22	ENSNGAG00000000937 #22
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Cricetidae	ANCESTRAL SPECIES	13	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Prairie vole	MODERN SPECIES	14																ENSMOCG00000019833 #22	Ubxn4 (ENSMOCG00000005911) #23	ENSMOCG00000014114 #24	ENSMOCG00000022321 #24	ENSMOCG00000022901 #24	Mcm6 (ENSMOCG00000019390) #25	Dars (ENSMOCG00000021532) #26	Cxcr4 (ENSMOCG00000002883) #27	ENSMOCG00000022887 #35	Thsd7b (ENSMOCG00000013052) #30	ENSMOCG00000021535	Rab3gap1 (ENSMOCG00000008132) #19	Map3k19 (ENSMOCG00000013038) #18	Ccnt2 (ENSMOCG00000002940) #17	Acmsd (ENSMOCG00000014467) #16	Tmem163 (ENSMOCG00000022463) #15
Northern American deer mouse	MODERN SPECIES	2	ENSPEMG00000031118	ENSPEMG00000026874	Dpp10 (ENSPEMG00000000215) #7	Actr3 (ENSPEMG00000013664) #8	Slc35f5 (ENSPEMG00000016352) #9	Gpr39 (ENSPEMG00000018261) #10	Lypd1 (ENSPEMG00000024961) #11	Nckap5 (ENSPEMG00000011621) #12	Mgat5 (ENSPEMG00000011505) #13	Tmem163 (ENSPEMG00000026492) #15	Acmsd (ENSPEMG00000022800) #16	Ccnt2 (ENSPEMG00000020594) #17	Map3k19 (ENSPEMG00000031034) #18	Rab3gap1 (ENSPEMG00000021375) #19	Zranb3 (ENSPEMG00000020506) #21	R3hdm1 (ENSPEMG00000015187) #22	Ubxn4 (ENSPEMG00000010932) #23	Lct (ENSPEMG00000019494) #24	Mcm6 (ENSPEMG00000020021) #25	ENSPEMG00000024397	ENSPEMG00000019350	Dars (ENSPEMG00000019511) #26	Cxcr4 (ENSPEMG00000019983) #27	Thsd7b (ENSPEMG00000025817) #30	ENSPEMG00000002191	Zp3r (ENSPEMG00000017253)	ENSPEMG00000023940	ENSPEMG00000029381	Pfkfb2 (ENSPEMG00000001133)	Yod1 (ENSPEMG00000025445)	AA986860 (ENSPEMG00000005057)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667	ENSGT00940000162282
Chinese hamster chok1gshd	MODERN SPECIES	2	Actr3 (ENSCGRG00001003441) #8	Slc35f5 (ENSCGRG00001020752) #9	Gpr39 (ENSCGRG00001018849) #10	Lypd1 (ENSCGRG00001015904) #11	Nckap5 (ENSCGRG00001017969) #12	ENSCGRG00001004696	MGAT5 (ENSCGRG00001021442) #13	Tmem163 (ENSCGRG00001020380) #15	ENSCGRG00001024550	Acmsd (ENSCGRG00001020813) #16	Ccnt2 (ENSCGRG00001018905) #17	Map3k19 (ENSCGRG00001013377) #18	Rab3gap1 (ENSCGRG00001021319) #19	Zranb3 (ENSCGRG00001000424) #21	ENSCGRG00001006066	R3hdm1 (ENSCGRG00001012357) #22	Ubxn4 (ENSCGRG00001000942) #23	Lct (ENSCGRG00001023254) #24	Mcm6 (ENSCGRG00001020597) #25	Dars (ENSCGRG00001022990) #26	Cxcr4 (ENSCGRG00001020258) #27	Thsd7b (ENSCGRG00001018236) #30	ENSCGRG00001014580	ENSCGRG00001013335	Zp3r (ENSCGRG00001013800)	C4bp (ENSCGRG00001011270)	Pfkfb2 (ENSCGRG00001012980)	Yod1 (ENSCGRG00001024029)	AA986860 (ENSCGRG00001023279)	ENSCGRG00001022734	Fcamr (ENSCGRG00001020858)
Golden Hamster	MODERN SPECIES	711		ENSMAUG00000017530	Dpp10 (ENSMAUG00000002914) #7	ENSMAUG00000014128 #8	Slc35f5 (ENSMAUG00000011137) #9	Gpr39 (ENSMAUG00000013127) #10	Nckap5 (ENSMAUG00000014045) #12	Mgat5 (ENSMAUG00000016950) #13	Tmem163 (ENSMAUG00000012260) #15	Acmsd (ENSMAUG00000011487) #16	Ccnt2 (ENSMAUG00000009688) #17	Map3k19 (ENSMAUG00000010654) #18	ENSMAUG00000016085	Rab3gap1 (ENSMAUG00000004952) #19	Zranb3 (ENSMAUG00000002029) #21	R3hdm1 (ENSMAUG00000010315) #22	Ubxn4 (ENSMAUG00000002324) #23	Lct (ENSMAUG00000001383) #24	Mcm6 (ENSMAUG00000000085) #25	Dars (ENSMAUG00000017400) #26	Cxcr4 (ENSMAUG00000017285) #27	Thsd7b (ENSMAUG00000014902) #30	ENSMAUG00000014678	ENSMAUG00000014083	Zp3r (ENSMAUG00000016071)	C4bp (ENSMAUG00000016717)	Pfkfb2 (ENSMAUG00000013673)	Yod1 (ENSMAUG00000013895)	AA986860 (ENSMAUG00000012446)	Fcamr (ENSMAUG00000014341)	Pigr (ENSMAUG00000013137)
Murinae	ANCESTRAL SPECIES	11	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Mus	ANCESTRAL SPECIES	5	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Mus_A	ANCESTRAL SPECIES	5	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Mus_B	ANCESTRAL SPECIES	7	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307.c	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
Mus_C	ANCESTRAL SPECIES	1	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00940000162307.c	ENSGT00940000154640.b	ENSGT00940000154640.a.a.a	ENSGT00940000163065	ENSGT00950000182835.d.a	ENSGT00390000009989	ENSGT00390000017874	ENSGT00950000182977.A	ENSGT00940000161667
spretus	MODERN SPECIES		Htr5b (MGP_SPRETEiJ_G0015335)	Ddx18 (MGP_SPRETEiJ_G0015336)	Dpp10 (MGP_SPRETEiJ_G0015337) #7	Actr3 (MGP_SPRETEiJ_G0015338) #8	Slc35f5 (MGP_SPRETEiJ_G0015339) #9	Gpr39 (MGP_SPRETEiJ_G0015340) #10	Lypd1 (MGP_SPRETEiJ_G0015341) #11	Nckap5 (MGP_SPRETEiJ_G0015342) #12	Mgat5 (MGP_SPRETEiJ_G0015343) #13	Tmem163 (MGP_SPRETEiJ_G0015344) #15	Acmsd (MGP_SPRETEiJ_G0015345) #16	Ccnt2 (MGP_SPRETEiJ_G0015346) #17	Map3k19 (MGP_SPRETEiJ_G0015347) #18	Rab3gap1 (MGP_SPRETEiJ_G0015348) #19	Zranb3 (MGP_SPRETEiJ_G0015349) #21	R3hdm1 (MGP_SPRETEiJ_G0015350) #22	Ubxn4 (MGP_SPRETEiJ_G0015351) #23	MGP_SPRETEiJ_G0015352 #24	Mcm6 (MGP_SPRETEiJ_G0015353) #25	Dars (MGP_SPRETEiJ_G0015354) #26	Cxcr4 (MGP_SPRETEiJ_G0015355) #27	Thsd7b (MGP_SPRETEiJ_G0015356) #30	Zp3r (MGP_SPRETEiJ_G0015357)	C4bp (MGP_SPRETEiJ_G0015358)	MGP_SPRETEiJ_G0015359	MGP_SPRETEiJ_G0015360	Yod1 (MGP_SPRETEiJ_G0015361)	AA986860 (MGP_SPRETEiJ_G0015362)	Fcamr (MGP_SPRETEiJ_G0015363)	Pigr (MGP_SPRETEiJ_G0015364)	Fcmr (MGP_SPRETEiJ_G0015365)
Steppe mouse	MODERN SPECIES	226	ENSMSIG00000001394	Actr3 (ENSMSIG00000001372) #8	Slc35f5 (ENSMSIG00000001233) #9	Gpr39 (ENSMSIG00000001206) #10	ENSMSIG00000001196	ENSMSIG00000001164 #11	Nckap5 (ENSMSIG00000000300) #12	Mgat5 (ENSMSIG00000026163) #13	Tmem163 (ENSMSIG00000026138) #15	Acmsd (ENSMSIG00000026123) #16	Ccnt2 (ENSMSIG00000026074) #17	Map3k19 (ENSMSIG00000026051) #18	Rab3gap1 (ENSMSIG00000025984) #19	ENSMSIG00000025963	Zranb3 (ENSMSIG00000025901) #21	R3hdm1 (ENSMSIG00000025791) #22	Ubxn4 (ENSMSIG00000025769) #23	Lct (ENSMSIG00000025747) #24	Mcm6 (ENSMSIG00000025697) #25	Dars (ENSMSIG00000025659) #26	Cxcr4 (ENSMSIG00000025594) #27	Thsd7b (ENSMSIG00000025361) #30	ENSMSIG00000025327	Zp3r (ENSMSIG00000025284)	C4bp (ENSMSIG00000025264)	ENSMSIG00000025240	Pfkfb2 (ENSMSIG00000025048)	Yod1 (ENSMSIG00000025044)	AA986860 (ENSMSIG00000025040)	Fcamr (ENSMSIG00000025013)	Pigr (ENSMSIG00000024992)
Mouse	MODERN SPECIES		Htr5b (ENSMUSG00000050534)	Ddx18 (ENSMUSG00000001674)	Dpp10 (ENSMUSG00000036815) #7	Actr3 (ENSMUSG00000026341) #8	Slc35f5 (ENSMUSG00000026342) #9	Gpr39 (ENSMUSG00000026343) #10	Lypd1 (ENSMUSG00000026344) #11	Nckap5 (ENSMUSG00000049690) #12	Mgat5 (ENSMUSG00000036155) #13	Tmem163 (ENSMUSG00000026347) #15	Acmsd (ENSMUSG00000026348) #16	Ccnt2 (ENSMUSG00000026349) #17	Map3k19 (ENSMUSG00000051590) #18	Rab3gap1 (ENSMUSG00000036104) #19	Zranb3 (ENSMUSG00000036086) #21	R3hdm1 (ENSMUSG00000056211) #22	Ubxn4 (ENSMUSG00000026353) #23	Lct (ENSMUSG00000026354) #24	Mcm6 (ENSMUSG00000026355) #25	Dars (ENSMUSG00000026356) #26	Cxcr4 (ENSMUSG00000045382) #27	Thsd7b (ENSMUSG00000042581) #30	Cd55b (ENSMUSG00000026401)	Cd55 (ENSMUSG00000026399)	Zp3r (ENSMUSG00000042554)	C4bp (ENSMUSG00000026405)	Pfkfb2 (ENSMUSG00000026409)	Yod1 (ENSMUSG00000046404)	AA986860 (ENSMUSG00000042510)	Fcamr (ENSMUSG00000026415)	Pigr (ENSMUSG00000026417)
Ryukyu mouse	MODERN SPECIES		Htr5b (MGP_CAROLIEiJ_G0014528)	Ddx18 (MGP_CAROLIEiJ_G0014529)	Dpp10 (MGP_CAROLIEiJ_G0014530) #7	Actr3 (MGP_CAROLIEiJ_G0014531) #8	Slc35f5 (MGP_CAROLIEiJ_G0014532) #9	Gpr39 (MGP_CAROLIEiJ_G0014533) #10	Lypd1 (MGP_CAROLIEiJ_G0014534) #11	Nckap5 (MGP_CAROLIEiJ_G0014535) #12	Mgat5 (MGP_CAROLIEiJ_G0014536) #13	Tmem163 (MGP_CAROLIEiJ_G0014537) #15	Acmsd (MGP_CAROLIEiJ_G0014538) #16	Ccnt2 (MGP_CAROLIEiJ_G0014539) #17	Map3k19 (MGP_CAROLIEiJ_G0014540) #18	Rab3gap1 (MGP_CAROLIEiJ_G0014541) #19	Zranb3 (MGP_CAROLIEiJ_G0014542) #21	R3hdm1 (MGP_CAROLIEiJ_G0014543) #22	Ubxn4 (MGP_CAROLIEiJ_G0014544) #23	Lct (MGP_CAROLIEiJ_G0014545) #24	Mcm6 (MGP_CAROLIEiJ_G0014546) #25	Dars (MGP_CAROLIEiJ_G0014547) #26	Cxcr4 (MGP_CAROLIEiJ_G0014549) #27	MGP_CAROLIEiJ_G0014550 #30	MGP_CAROLIEiJ_G0014551	MGP_CAROLIEiJ_G0014552	Zp3r (MGP_CAROLIEiJ_G0014553)	C4bp (MGP_CAROLIEiJ_G0014554)	MGP_CAROLIEiJ_G0014555	MGP_CAROLIEiJ_G0014556	Yod1 (MGP_CAROLIEiJ_G0014557)	AA986860 (MGP_CAROLIEiJ_G0014558)	Fcamr (MGP_CAROLIEiJ_G0014559)
Shrew mouse	MODERN SPECIES	18	Htr5b (MGP_PahariEiJ_G0027764)	Ddx18 (MGP_PahariEiJ_G0027765)	Dpp10 (MGP_PahariEiJ_G0027766) #7	Actr3 (MGP_PahariEiJ_G0027767) #8	Slc35f5 (MGP_PahariEiJ_G0027768) #9	Gpr39 (MGP_PahariEiJ_G0027769) #10	Lypd1 (MGP_PahariEiJ_G0027770) #11	Nckap5 (MGP_PahariEiJ_G0027771) #12	Mgat5 (MGP_PahariEiJ_G0027772) #13	Tmem163 (MGP_PahariEiJ_G0027773) #15	Acmsd (MGP_PahariEiJ_G0027774) #16	Ccnt2 (MGP_PahariEiJ_G0027775) #17	MGP_PahariEiJ_G0027776 #18	Rab3gap1 (MGP_PahariEiJ_G0027777) #19	Zranb3 (MGP_PahariEiJ_G0027778) #21	R3hdm1 (MGP_PahariEiJ_G0027779) #22	Ubxn4 (MGP_PahariEiJ_G0027780) #23	Lct (MGP_PahariEiJ_G0027781) #24	Mcm6 (MGP_PahariEiJ_G0027782) #25	Dars (MGP_PahariEiJ_G0027783) #26	Cxcr4 (MGP_PahariEiJ_G0027784) #27	Thsd7b (MGP_PahariEiJ_G0027785) #30	MGP_PahariEiJ_G0027786	MGP_PahariEiJ_G0027787	Zp3r (MGP_PahariEiJ_G0027788)	MGP_PahariEiJ_G0027789	MGP_PahariEiJ_G0027790	Yod1 (MGP_PahariEiJ_G0027791)	AA986860 (MGP_PahariEiJ_G0027792)	Fcamr (MGP_PahariEiJ_G0027793)	Pigr (MGP_PahariEiJ_G0027794)
Rat	MODERN SPECIES	4	Actr3 (ENSRNOG00000003206) #8	LOC100362110 (ENSRNOG00000030481)	Slc35f5 (ENSRNOG00000003403) #9	Gpr39 (ENSRNOG00000021586) #10	Lypd1 (ENSRNOG00000003453) #11	Nckap5 (ENSRNOG00000021553) #12	tuba1c-ps1 (ENSRNOG00000070079)	ENSRNOG00000066401	Mgat5 (ENSRNOG00000003614) #13	Tmem163 (ENSRNOG00000003769) #15	Acmsd (ENSRNOG00000003884) #16	Ccnt2 (ENSRNOG00000017113) #17	Map3k19 (ENSRNOG00000003952) #18	Rab3gap1 (ENSRNOG00000003953) #19	Zranb3 (ENSRNOG00000003979) #21	R3hdm1 (ENSRNOG00000004099) #22	Ubxn4 (ENSRNOG00000003625) #23	Lct (ENSRNOG00000003681) #24	Mcm6 (ENSRNOG00000003703) #25	Dars1 (ENSRNOG00000003743) #26	Cxcr4 (ENSRNOG00000003866) #27	Thsd7b (ENSRNOG00000003878) #30	Cd55 (ENSRNOG00000003927)	Zp3r (ENSRNOG00000025862)	C4bpa (ENSRNOG00000004062)	Lsm6 (ENSRNOG00000030374)	C4bpb (ENSRNOG00000004125)	Pfkfb2 (ENSRNOG00000004162)	Yod1 (ENSRNOG00000025704)	C13h1orf116 (ENSRNOG00000004341)	Fcamr (ENSRNOG00000004393)
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	452			Actr3 (ENSDORG00000011988) #8	Slc35f5 (ENSDORG00000011284) #9	Gpr39 (ENSDORG00000001240) #10	ENSDORG00000001242	ENSDORG00000030244 #12	ENSDORG00000026573 #12	Mgat5 (ENSDORG00000015002) #13	Tmem163 (ENSDORG00000015004) #15	Acmsd (ENSDORG00000006096) #16	ENSDORG00000026985 #17	Map3k19 (ENSDORG00000023534) #18	Rab3gap1 (ENSDORG00000007961) #19	ENSDORG00000004211 #21	ENSDORG00000027689 #22	ENSDORG00000002670 #22	Ubxn4 (ENSDORG00000012991) #23	Lct (ENSDORG00000013078) #24	Mcm6 (ENSDORG00000013081) #25	Dars (ENSDORG00000013479) #26	Cxcr4 (ENSDORG00000014745) #27	ENSDORG00000026134
Kangaroo rat	MODERN SPECIES	452		Actr3 (ENSDORG00000011988) #8	Slc35f5 (ENSDORG00000011284) #9	Gpr39 (ENSDORG00000001240) #10	ENSDORG00000001242	ENSDORG00000030244 #12	ENSDORG00000026573 #12	Mgat5 (ENSDORG00000015002) #13	Tmem163 (ENSDORG00000015004) #15	Acmsd (ENSDORG00000006096) #16	ENSDORG00000026985 #17	Map3k19 (ENSDORG00000023534) #18	Rab3gap1 (ENSDORG00000007961) #19	ENSDORG00000004211 #21	ENSDORG00000027689 #22	ENSDORG00000002670 #22	Ubxn4 (ENSDORG00000012991) #23	Lct (ENSDORG00000013078) #24	Mcm6 (ENSDORG00000013081) #25	Dars (ENSDORG00000013479) #26	Cxcr4 (ENSDORG00000014745) #27	ENSDORG00000026134
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Hystricomorpha	ANCESTRAL SPECIES	20	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b.d #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b.d #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Hystricomorpha_b	ANCESTRAL SPECIES	67	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b.d #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a	ENSGT00940000157233
Degu	MODERN SPECIES	55	ENSODEG00000008310 #9	ENSODEG00000007110	GPR39 (ENSODEG00000007476) #10	ENSODEG00000006743	LYPD1 (ENSODEG00000006977) #11	ENSODEG00000007263	ENSODEG00000007582	MGAT5 (ENSODEG00000007626) #13	TMEM163 (ENSODEG00000011042) #15	ENSODEG00000019401	ACMSD (ENSODEG00000007750) #16	ENSODEG00000008322 #17	MAP3K19 (ENSODEG00000007486) #18	RAB3GAP1 (ENSODEG00000009115) #19	ENSODEG00000008027 #21	R3HDM1 (ENSODEG00000008607) #22	ENSODEG00000012276 #23	LCT (ENSODEG00000008656) #24	ENSODEG00000007863 #25	DARS1 (ENSODEG00000007800) #26	ENSODEG00000019498	ENSODEG00000007226 #27	THSD7B (ENSODEG00000007694) #30	ENSODEG00000019640	HNMT (ENSODEG00000007191) #31	SPOPL (ENSODEG00000007333)	NXPH2 (ENSODEG00000007339) #34	ENSODEG00000007388	ENSODEG00000008677	ENSODEG00000008499
Long-tailed chinchilla	MODERN SPECIES	147						GPR39 (ENSCLAG00000002776) #10	LYPD1 (ENSCLAG00000002904) #11	NCKAP5 (ENSCLAG00000002972) #12	MGAT5 (ENSCLAG00000003416) #13	TMEM163 (ENSCLAG00000003859) #15	ACMSD (ENSCLAG00000003941) #16	CCNT2 (ENSCLAG00000004236) #17	MAP3K19 (ENSCLAG00000002067) #18	RAB3GAP1 (ENSCLAG00000002438) #19	ZRANB3 (ENSCLAG00000006849) #21	R3HDM1 (ENSCLAG00000007962) #22	UBXN4 (ENSCLAG00000004332) #23	LCT (ENSCLAG00000005005) #24	MCM6 (ENSCLAG00000005315) #25	DARS1 (ENSCLAG00000006355) #26	CXCR4 (ENSCLAG00000002279) #27	THSD7B (ENSCLAG00000001388) #30	HNMT (ENSCLAG00000001523) #31	SPOPL (ENSCLAG00000001710)	NXPH2 (ENSCLAG00000017455) #34	LRP1B (ENSCLAG00000002036) #37	KYNU (ENSCLAG00000005935)	ARHGAP15 (ENSCLAG00000006756)	GTDC1 (ENSCLAG00000007819)	ZEB2 (ENSCLAG00000002230)	ACVR2A (ENSCLAG00000002708)
Guinea pig	MODERN SPECIES	3	ACTR3 (ENSCPOG00000032478) #8	ENSCPOG00000032878	SLC35F5 (ENSCPOG00000008212) #9	GPR39 (ENSCPOG00000004139) #10	ENSCPOG00000020207	LYPD1 (ENSCPOG00000037678) #11	NCKAP5 (ENSCPOG00000011594) #12	MGAT5 (ENSCPOG00000004942) #13	TMEM163 (ENSCPOG00000004944) #15	ACMSD (ENSCPOG00000003832) #16	CCNT2 (ENSCPOG00000003960) #17	ENSCPOG00000023350	MAP3K19 (ENSCPOG00000004758) #18	RAB3GAP1 (ENSCPOG00000008653) #19	ENSCPOG00000010385 #21	R3HDM1 (ENSCPOG00000012784) #22	UBXN4 (ENSCPOG00000011377) #23	ENSCPOG00000037215 #24	MCM6 (ENSCPOG00000004609) #25	DARS1 (ENSCPOG00000004614) #26	CXCR4 (ENSCPOG00000014249) #27	THSD7B (ENSCPOG00000001976) #30	HNMT (ENSCPOG00000002449) #31	SPOPL (ENSCPOG00000006344)	NXPH2 (ENSCPOG00000003323) #34	LRP1B (ENSCPOG00000014122) #37	ENSCPOG00000038865	ENSCPOG00000021859	KYNU (ENSCPOG00000011220)	ARHGAP15 (ENSCPOG00000007467)	GTDC1 (ENSCPOG00000007030)
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000001738	ENSHGLG00000039688	ENSHGLG00000015922 #10	LYPD1 (ENSHGLG00000033205) #11	NCKAP5 (ENSHGLG00000008645) #12	MGAT5 (ENSHGLG00000005155) #13	ENSHGLG00000045914	ACMSD (ENSHGLG00000009833) #16	ENSHGLG00000032858	TMEM163 (ENSHGLG00000008943) #15	CCNT2 (ENSHGLG00000013595) #17	MAP3K19 (ENSHGLG00000009472) #18	RAB3GAP1 (ENSHGLG00000015354) #19	ENSHGLG00000047059	ZRANB3 (ENSHGLG00000015976) #21	R3HDM1 (ENSHGLG00000015718) #22	UBXN4 (ENSHGLG00000009780) #23	LCT (ENSHGLG00000011021) #24	ENSHGLG00000011684 #25	ENSHGLG00000014798	ENSHGLG00000021331	ENSHGLG00000014945 #26	ENSHGLG00000047777 #27	ENSHGLG00000008464	ENSHGLG00000042034	ENSHGLG00000005400 #30	ENSHGLG00000038812	ENSHGLG00000046944	ENSHGLG00000009497	ENSHGLG00000039209 #31	ENSHGLG00000035617
Sciuridae	ANCESTRAL SPECIES	10	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a	ENSGT00940000157233
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005001047 #9	ENSSVLG00005001116	GPR39 (ENSSVLG00005001131) #10	LYPD1 (ENSSVLG00005001165) #11	NCKAP5 (ENSSVLG00005001316) #12	MGAT5 (ENSSVLG00005001430) #13	TMEM163 (ENSSVLG00005001446) #15	ENSSVLG00005001460	ACMSD (ENSSVLG00005001482) #16	CCNT2 (ENSSVLG00005001535) #17	MAP3K19 (ENSSVLG00005001601) #18	ENSSVLG00005001704	RAB3GAP1 (ENSSVLG00005001809) #19	ZRANB3 (ENSSVLG00005002019) #21	ENSSVLG00005002069	ENSSVLG00005002116 #22	UBXN4 (ENSSVLG00005002201) #23	LCT (ENSSVLG00005002233) #24	MCM6 (ENSSVLG00005002280) #25	DARS1 (ENSSVLG00005002326) #26	CXCR4 (ENSSVLG00005002352) #27	THSD7B (ENSSVLG00005002439) #30	HNMT (ENSSVLG00005002599) #31	SPOPL (ENSSVLG00005002616)	NXPH2 (ENSSVLG00005002646) #34	LRP1B (ENSSVLG00005002708) #37	ENSSVLG00005002904	KYNU (ENSSVLG00005002948)	ARHGAP15 (ENSSVLG00005003035)	GTDC1 (ENSSVLG00005003107)	ENSSVLG00005003174
Eurasian red squirrel	MODERN SPECIES	62																ENSSVLG00005020982 #22
Marmotini	ANCESTRAL SPECIES	2	ENSGT00390000005140.b.b	ENSGT00940000160622	ENSGT00900000143180	ENSGT00530000063529.C	ENSGT01100000263518.B.a ##10	ENSGT00940000157345.b.a	ENSGT00940000162860	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00940000157345.b.b	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT00950000182891.a.a.b.b	ENSGT01050000244848.C.a #27	ENSGT00390000016988.a.a.a.b.a.b	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Marmotini_b	ANCESTRAL SPECIES	10	ENSGT00390000005140.b.b	ENSGT00940000160622	ENSGT00900000143180	ENSGT00530000063529.C	ENSGT01100000263518.B.a ##10	ENSGT00940000157345.b.a	ENSGT00940000162860	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00940000157345.b.b	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT00950000182891.a.a.b.b	ENSGT01050000244848.C.a #27	ENSGT00390000016988.a.a.a.b.a.b	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Squirrel	MODERN SPECIES	69	ENSSTOG00000033107	FAM168B (ENSSTOG00000000206)	ENSSTOG00000000201	AMER3 (ENSSTOG00000033812)	ENSSTOG00000024486	ENSSTOG00000008514	IMP4 (ENSSTOG00000003373)	CCDC115 (ENSSTOG00000025738)	ENSSTOG00000033915	ACMSD (ENSSTOG00000010532) #16	CCNT2 (ENSSTOG00000010537) #17	ENSSTOG00000033496	MAP3K19 (ENSSTOG00000022671) #18	RAB3GAP1 (ENSSTOG00000010563) #19	ZRANB3 (ENSSTOG00000010155) #21	R3HDM1 (ENSSTOG00000007572) #22	UBXN4 (ENSSTOG00000007625) #23	LCT (ENSSTOG00000013618) #24	MCM6 (ENSSTOG00000013639) #25	DARS1 (ENSSTOG00000006292) #26	ENSSTOG00000034891	CXCR4 (ENSSTOG00000006334) #27	THSD7B (ENSSTOG00000002491) #30	HNMT (ENSSTOG00000010780) #31	SPOPL (ENSSTOG00000022722)	NXPH2 (ENSSTOG00000001587) #34	ENSSTOG00000031059	LRP1B (ENSSTOG00000002686) #37	KYNU (ENSSTOG00000009286)	ARHGAP15 (ENSSTOG00000009312)	GTDC1 (ENSSTOG00000016373)
Arctic ground squirrel	MODERN SPECIES	3	FAM168B (ENSUPAG00010005739)	ENSUPAG00010005727	SMIM39 (ENSUPAG00010005719)	AMER3 (ENSUPAG00010005717)	GPR148 (ENSUPAG00010005712) ##10	ENSUPAG00010005702	PTPN18 (ENSUPAG00010005670)	IMP4 (ENSUPAG00010005644)	CCDC115 (ENSUPAG00010005637)	ENSUPAG00010005624	ACMSD (ENSUPAG00010005610) #16	CCNT2 (ENSUPAG00010005558) #17	MAP3K19 (ENSUPAG00010005540) #18	RAB3GAP1 (ENSUPAG00010005478) #19	ZRANB3 (ENSUPAG00010005425) #21	R3HDM1 (ENSUPAG00010005353) #22	UBXN4 (ENSUPAG00010005219) #23	LCT (ENSUPAG00010005203) #24	DARS1 (ENSUPAG00010005170) #26	ENSUPAG00010005164	CXCR4 (ENSUPAG00010005161) #27	ENSUPAG00010005155	THSD7B (ENSUPAG00010005115) #30	HNMT (ENSUPAG00010005103) #31	SPOPL (ENSUPAG00010005093)	NXPH2 (ENSUPAG00010005088) #34	ENSUPAG00010005074	ENSUPAG00010005063	LRP1B (ENSUPAG00010004938) #37	KYNU (ENSUPAG00010004892)	ARHGAP15 (ENSUPAG00010004846)
Alpin marmot	MODERN SPECIES	5	ENSMMMG00000020819	SMIM39 (ENSMMMG00000020823)	AMER3 (ENSMMMG00000020834)	GPR148 (ENSMMMG00000020839) ##10	ENSMMMG00000020842	PTPN18 (ENSMMMG00000020871)	IMP4 (ENSMMMG00000020886)	ENSMMMG00000020899	ENSMMMG00000020909	ACMSD (ENSMMMG00000020928) #16	CCNT2 (ENSMMMG00000020934) #17	MAP3K19 (ENSMMMG00000020969) #18	RAB3GAP1 (ENSMMMG00000020992) #19	ENSMMMG00000021050	ZRANB3 (ENSMMMG00000021062) #21	R3HDM1 (ENSMMMG00000021101) #22	UBXN4 (ENSMMMG00000021133) #23	LCT (ENSMMMG00000021153) #24	MCM6 (ENSMMMG00000021164) #25	DARS1 (ENSMMMG00000021177) #26	ENSMMMG00000021188	CXCR4 (ENSMMMG00000021192) #27	ENSMMMG00000021196	THSD7B (ENSMMMG00000021210) #30	HNMT (ENSMMMG00000021232) #31	SPOPL (ENSMMMG00000021248)	NXPH2 (ENSMMMG00000021251) #34	LRP1B (ENSMMMG00000021313) #37	KYNU (ENSMMMG00000021410)	ARHGAP15 (ENSMMMG00000021442)	ENSMMMG00000021461
Lagomorpha	ANCESTRAL SPECIES	12	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a	ENSGT00940000157233
Rabbit	MODERN SPECIES	18	DPP10 (ENSOCUG00000008378) #7	ENSOCUG00000030005	ACTR3 (ENSOCUG00000004395) #8	SLC35F5 (ENSOCUG00000013099) #9	ENSOCUG00000014530	GPR39 (ENSOCUG00000000181) #10	LYPD1 (ENSOCUG00000000182) #11	NCKAP5 (ENSOCUG00000000184) #12	MGAT5 (ENSOCUG00000011096) #13	TMEM163 (ENSOCUG00000011107) #15	CCNT2 (ENSOCUG00000000661) #17	MAP3K19 (ENSOCUG00000000666) #18	ENSOCUG00000029409	RAB3GAP1 (ENSOCUG00000002022) #19	ZRANB3 (ENSOCUG00000007243) #21	R3HDM1 (ENSOCUG00000017366) #22	UBXN4 (ENSOCUG00000000291) #23	ENSOCUG00000000293 #24	ENSOCUG00000030157	LCT (ENSOCUG00000027277) #24	ENSOCUG00000035432	DARS1 (ENSOCUG00000014790) #26	CXCR4 (ENSOCUG00000001923) #27	THSD7B (ENSOCUG00000004494) #30	HNMT (ENSOCUG00000009065) #31	ENSOCUG00000029907	ENSOCUG00000034988	SPOPL (ENSOCUG00000006944)	NXPH2 (ENSOCUG00000026297) #34	ENSOCUG00000025059	ENSOCUG00000021532
Pika	MODERN SPECIES	878																ENSOPRG00000006072 #22	UBXN4 (ENSOPRG00000006108) #23	LCT (ENSOPRG00000006115) #24	MCM6 (ENSOPRG00000006133) #25
Tree shrew	MODERN SPECIES	1423																R3HDM1 (ENSTBEG00000003508) #22
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT01050000244986.b.b	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Suina	ANCESTRAL SPECIES	48	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Pig	MODERN SPECIES	6	LYPD1 (ENSSSCG00000035102) #11	ENSSSCG00000052349	ENSSSCG00000051377	NCKAP5 (ENSSSCG00000023479) #12	ENSSSCG00000051912	MGAT5 (ENSSSCG00000015701) #13	TMEM163 (ENSSSCG00000015700) #15	ENSSSCG00000045091	ACMSD (ENSSSCG00000015699) #16	CCNT2 (ENSSSCG00000015697) #17	MAP3K19 (ENSSSCG00000015696) #18	ENSSSCG00000033241	RAB3GAP1 (ENSSSCG00000015695) #19	ENSSSCG00000039294	ZRANB3 (ENSSSCG00000015694) #21	R3HDM1 (ENSSSCG00000015692) #22	UBXN4 (ENSSSCG00000015690) #23	ENSSSCG00000054388	ENSSSCG00000030013 #24	ENSSSCG00000053961	ENSSSCG00000015691 #24	ENSSSCG00000051964	MCM6 (ENSSSCG00000035564) #25	DARS1 (ENSSSCG00000015689) #26	CXCR4 (ENSSSCG00000039416) #27	ENSSSCG00000043527	ENSSSCG00000042807	THSD7B (ENSSSCG00000040172) #30	HNMT (ENSSSCG00000035195) #31	ENSSSCG00000046078	ENSSSCG00000041316
Chacoan peccary	MODERN SPECIES	130	DPP10 (ENSCWAG00000020970) #7	ACTR3 (ENSCWAG00000020907) #8	SLC35F5 (ENSCWAG00000020838) #9	GPR39 (ENSCWAG00000020819) #10	LYPD1 (ENSCWAG00000020808) #11	NCKAP5 (ENSCWAG00000020738) #12	MGAT5 (ENSCWAG00000020711) #13	ENSCWAG00000020698	TMEM163 (ENSCWAG00000020690) #15	ACMSD (ENSCWAG00000020650) #16	CCNT2 (ENSCWAG00000020610) #17	MAP3K19 (ENSCWAG00000020492) #18	RAB3GAP1 (ENSCWAG00000020244) #19	ENSCWAG00000020208	ZRANB3 (ENSCWAG00000020165) #21	R3HDM1 (ENSCWAG00000019873) #22	ENSCWAG00000019832	ENSCWAG00000019811 #24	ENSCWAG00000019773 #24	MCM6 (ENSCWAG00000019730) #25	DARS1 (ENSCWAG00000019676) #26	CXCR4 (ENSCWAG00000019662) #27	ENSCWAG00000019657	THSD7B (ENSCWAG00000019475) #30	HNMT (ENSCWAG00000019443) #31	SPOPL (ENSCWAG00000019425)	NXPH2 (ENSCWAG00000019401) #34	LRP1B (ENSCWAG00000019047) #37	KYNU (ENSCWAG00000018949)	ARHGAP15 (ENSCWAG00000018864)	GTDC1 (ENSCWAG00000018711)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000154657.D #7	ENSGT00940000155065.mb #8	ENSGT00390000005949 #9	ENSGT00390000007776.d	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000155065.mb #8	ENSGT00390000005949 #9	ENSGT00390000007776.d	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000164579.f	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00940000155065.mb #8	ENSGT00390000005949 #9	ENSGT00390000007776.d	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000164579.f	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00390000005949 #9	ENSGT00390000007776.d	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000164579.f	ENSGT00390000011085.sb.a.a.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00910000147620	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000155065.mb #8	ENSGT00390000005949 #9	ENSGT00390000007776.d	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000164579.f	ENSGT00390000011085.sb.a.a.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214	ENSGT00950000183208.A.c.a
Narwhal	MODERN SPECIES	302	SLC35F5 (ENSMMNG00015006913) #9	GPR39 (ENSMMNG00015006884) #10	LYPD1 (ENSMMNG00015006865) #11	ENSMMNG00015006851	NCKAP5 (ENSMMNG00015006713) #12	ENSMMNG00015006640	ENSMMNG00015006627	ENSMMNG00015006617	MGAT5 (ENSMMNG00015006577) #13	TMEM163 (ENSMMNG00015006547) #15	ACMSD (ENSMMNG00015006514) #16	CCNT2 (ENSMMNG00015006480) #17	RAB3GAP1 (ENSMMNG00015006395) #19	ENSMMNG00015006347	ZRANB3 (ENSMMNG00015006291) #21	R3HDM1 (ENSMMNG00015006127) #22	UBXN4 (ENSMMNG00015006041) #23	LCT (ENSMMNG00015006012) #24	MCM6 (ENSMMNG00015005976) #25	DARS1 (ENSMMNG00015005898) #26	CXCR4 (ENSMMNG00015005885) #27	THSD7B (ENSMMNG00015005865) #30	HNMT (ENSMMNG00015005844) #31	SPOPL (ENSMMNG00015005825)	NXPH2 (ENSMMNG00015005810) #34	LRP1B (ENSMMNG00015005526) #37	KYNU (ENSMMNG00015005428)	ARHGAP15 (ENSMMNG00015005410)	GTDC1 (ENSMMNG00015005348)	ENSMMNG00015005304	ZEB2 (ENSMMNG00015005275)
Beluga whale	MODERN SPECIES	84									MGAT5 (ENSDLEG00000017965) #13	TMEM163 (ENSDLEG00000018002) #15	ACMSD (ENSDLEG00000018029) #16	CCNT2 (ENSDLEG00000018071) #17	ENSDLEG00000016595 #18	RAB3GAP1 (ENSDLEG00000016616) #19	ZRANB3 (ENSDLEG00000016733) #21	R3HDM1 (ENSDLEG00000016834) #22	UBXN4 (ENSDLEG00000016890) #23	LCT (ENSDLEG00000016911) #24	MCM6 (ENSDLEG00000016985) #25	DARS (ENSDLEG00000017015) #26	CXCR4 (ENSDLEG00000017074) #27	ENSDLEG00000017079	THSD7B (ENSDLEG00000017083) #30	HNMT (ENSDLEG00000017149) #31	SPOPL (ENSDLEG00000017165)	NXPH2 (ENSDLEG00000017199) #34	LRP1B (ENSDLEG00000017215) #37	KYNU (ENSDLEG00000017616)	ARHGAP15 (ENSDLEG00000017655)	GTDC1 (ENSDLEG00000017703)	ENSDLEG00000017836
Vaquita	MODERN SPECIES	18	ACTR3 (ENSPSNG00000018767) #8	SLC35F5 (ENSPSNG00000018619) #9	GPR39 (ENSPSNG00000018589) #10	LYPD1 (ENSPSNG00000018523) #11	ENSPSNG00000018466	NCKAP5 (ENSPSNG00000018140) #12	ENSPSNG00000018068	ENSPSNG00000018042	MGAT5 (ENSPSNG00000017999) #13	ENSPSNG00000017945	TMEM163 (ENSPSNG00000017853) #15	ACMSD (ENSPSNG00000017684) #16	CCNT2 (ENSPSNG00000017589) #17	RAB3GAP1 (ENSPSNG00000017295) #19	ZRANB3 (ENSPSNG00000016864) #21	R3HDM1 (ENSPSNG00000015949) #22	UBXN4 (ENSPSNG00000015726) #23	LCT (ENSPSNG00000015477) #24	MCM6 (ENSPSNG00000015366) #25	DARS1 (ENSPSNG00000015285) #26	CXCR4 (ENSPSNG00000015228) #27	THSD7B (ENSPSNG00000014532) #30	HNMT (ENSPSNG00000014404) #31	SPOPL (ENSPSNG00000014332)	NXPH2 (ENSPSNG00000014280) #34	LRP1B (ENSPSNG00000011597) #37	KYNU (ENSPSNG00000011089)	ARHGAP15 (ENSPSNG00000010851)	GTDC1 (ENSPSNG00000010572)	ZEB2 (ENSPSNG00000010233)	ENSPSNG00000010148
Dolphin	MODERN SPECIES	94															ZRANB3 (ENSTTRG00000003932) #21	R3HDM1 (ENSTTRG00000003935) #22	UBXN4 (ENSTTRG00000003937) #23	LCT (ENSTTRG00000003952) #24
Sperm whale	MODERN SPECIES	11	RALB (ENSPCTG00005003091)	TMEM185B (ENSPCTG00005003101)	EPB41L5 (ENSPCTG00005003119)	PTPN4 (ENSPCTG00005003176)	ENSPCTG00005003236	CFAP221 (ENSPCTG00005003252)	SCTR (ENSPCTG00005003306)	TMEM37 (ENSPCTG00005003326)	ENSPCTG00005003336 #13	TMEM163 (ENSPCTG00005003347) #15	ENSPCTG00005003365	ACMSD (ENSPCTG00005003387) #16	CCNT2 (ENSPCTG00005003425) #17	RAB3GAP1 (ENSPCTG00005003468) #19	ZRANB3 (ENSPCTG00005003551) #21	R3HDM1 (ENSPCTG00005003598) #22	UBXN4 (ENSPCTG00005000221) #23	LCT (ENSPCTG00005000300) #24	DARS1 (ENSPCTG00005000347) #26	CXCR4 (ENSPCTG00005000384) #27	ENSPCTG00005000398	THSD7B (ENSPCTG00005000463) #30	ENSPCTG00005000701	HNMT (ENSPCTG00005000712) #31	SPOPL (ENSPCTG00005000729)	NXPH2 (ENSPCTG00005000755) #34	ENSPCTG00005000761	LRP1B (ENSPCTG00005000809) #37	ENSPCTG00005000956	KYNU (ENSPCTG00005000984)	ARHGAP15 (ENSPCTG00005001030)
Blue whale	MODERN SPECIES	18	DPP10 (ENSBMSG00010000227) #7	ACTR3 (ENSBMSG00010000443) #8	SLC35F5 (ENSBMSG00010000488) #9	ENSBMSG00010000523	GPR39 (ENSBMSG00010000548) #10	LYPD1 (ENSBMSG00010000564) #11	NCKAP5 (ENSBMSG00010000614) #12	ENSBMSG00010000681	MGAT5 (ENSBMSG00010000719) #13	TMEM163 (ENSBMSG00010000754) #15	ACMSD (ENSBMSG00010000783) #16	CCNT2 (ENSBMSG00010000833) #17	ENSBMSG00010000873 #18	RAB3GAP1 (ENSBMSG00010000960) #19	ZRANB3 (ENSBMSG00010001026) #21	R3HDM1 (ENSBMSG00010001141) #22	ENSBMSG00010001212	LCT (ENSBMSG00010001241) #24	MCM6 (ENSBMSG00010001285) #25	DARS1 (ENSBMSG00010001326) #26	CXCR4 (ENSBMSG00010001344) #27	THSD7B (ENSBMSG00010001387) #30	ENSBMSG00010001454	HNMT (ENSBMSG00010001464) #31	SPOPL (ENSBMSG00010001484)	NXPH2 (ENSBMSG00010001502) #34	ENSBMSG00010001508	ENSBMSG00010001515	LRP1B (ENSBMSG00010001555) #37	KYNU (ENSBMSG00010001637)	ARHGAP15 (ENSBMSG00010001671)
Pecora	ANCESTRAL SPECIES	24	ENSGT00940000154657.D #7	ENSGT00390000004945.j	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Yarkand deer	MODERN SPECIES	26	SLC35F5 (ENSCHYG00000019102) #9	GPR39 (ENSCHYG00000019017) #10	LYPD1 (ENSCHYG00000018957) #11	ENSCHYG00000018824	NCKAP5 (ENSCHYG00000018364) #12	ENSCHYG00000018252	MGAT5 (ENSCHYG00000017596) #13	TMEM163 (ENSCHYG00000017497) #15	ACMSD (ENSCHYG00000017316) #16	CCNT2 (ENSCHYG00000017100) #17	MAP3K19 (ENSCHYG00000016167) #18	ENSCHYG00000015893	RAB3GAP1 (ENSCHYG00000015371) #19	ENSCHYG00000015314	ZRANB3 (ENSCHYG00000015153) #21	R3HDM1 (ENSCHYG00000013148) #22	UBXN4 (ENSCHYG00000013030) #23	LCT (ENSCHYG00000012888) #24	MCM6 (ENSCHYG00000012811) #25	DARS1 (ENSCHYG00000012423) #26	CXCR4 (ENSCHYG00000012367) #27	ENSCHYG00000012343	ENSCHYG00000012320	THSD7B (ENSCHYG00000011983) #30	HNMT (ENSCHYG00000011885) #31	ENSCHYG00000011854	SPOPL (ENSCHYG00000011681)	NXPH2 (ENSCHYG00000011648) #34	ENSCHYG00000011576	LRP1B (ENSCHYG00000010870) #37	KYNU (ENSCHYG00000010703)
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000154657.D #7	ENSGT00390000004945.j	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000017443.k.a	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000154657.D #7	ENSGT00390000004945.j	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000017443.k.a	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000153272.a.b.z.a.a.a.b	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033
Caprinae	ANCESTRAL SPECIES	5	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000017443.k.a	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000153272.a.b.z.a.a.a.b	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033
Goat	MODERN SPECIES	11	ENSCHIG00000026091	GPR39 (ENSCHIG00000019970) #10	ENSCHIG00000015349	LYPD1 (ENSCHIG00000019109) #11	NCKAP5 (ENSCHIG00000026101) #12	MGAT5 (ENSCHIG00000027215) #13	TMEM163 (ENSCHIG00000025354) #15	ENSCHIG00000013148	ENSCHIG00000009827	ACMSD (ENSCHIG00000019884) #16	CCNT2 (ENSCHIG00000016658) #17	MAP3K19 (ENSCHIG00000015546) #18	RAB3GAP1 (ENSCHIG00000005692) #19	ENSCHIG00000009928	ZRANB3 (ENSCHIG00000025781) #21	R3HDM1 (ENSCHIG00000020851) #22	UBXN4 (ENSCHIG00000023638) #23	LCT (ENSCHIG00000002692) #24	MCM6 (ENSCHIG00000017476) #25	DARS1 (ENSCHIG00000011050) #26	CXCR4 (ENSCHIG00000013798) #27	THSD7B (ENSCHIG00000014355) #30	ENSCHIG00000004822	HNMT (ENSCHIG00000010212) #31	SPOPL (ENSCHIG00000020853)	NXPH2 (ENSCHIG00000014059) #34	ENSCHIG00000024934	ENSCHIG00000015461	LRP1B (ENSCHIG00000012788) #37	ENSCHIG00000024840	KYNU (ENSCHIG00000025717)
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020022402	DPP10 (ENSOARG00020020607) #7	ACTR3 (ENSOARG00020020404) #8	SLC35F5 (ENSOARG00020019975) #9	ENSOARG00020019862 #10	ENSOARG00020019827 #10	LYPD1 (ENSOARG00020019803) #11	MGAT5 (ENSOARG00020018034) #13	TMEM163 (ENSOARG00020017931) #15	ENSOARG00020017892	ACMSD (ENSOARG00020017792) #16	CCNT2 (ENSOARG00020017712) #17	ENSOARG00020016565 #18	RAB3GAP1 (ENSOARG00020015640) #19	ZRANB3 (ENSOARG00020015121) #21	R3HDM1 (ENSOARG00020012873) #22	LCT (ENSOARG00020012566) #24	MCM6 (ENSOARG00020012369) #25	DARS1 (ENSOARG00020012080) #26	CXCR4 (ENSOARG00020012040) #27	ENSOARG00020012007	THSD7B (ENSOARG00020011585) #30	ENSOARG00020011562	HNMT (ENSOARG00020011495) #31	ENSOARG00020011354 #18	SPOPL (ENSOARG00020011256)	NXPH2 (ENSOARG00020011226) #34	ENSOARG00020011176	LRP1B (ENSOARG00020006148) #37	KYNU (ENSOARG00020005939)	ARHGAP15 (ENSOARG00020025262)
Bovinae	ANCESTRAL SPECIES	5	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00390000004945.j	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00950000183123.g.a.a.b.fb.b	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000153272.a.b.z.a.a.a.b	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Bos	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00390000004945.j	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT01100000263481.n.a.b.b.b.b	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00950000183123.g.a.a.b.fb.b	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000153272.a.b.z.a.a.a.b	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Bos_b	ANCESTRAL SPECIES	3	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT01100000263481.n.a.b.b.b.b	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00950000183123.g.a.a.b.fb.b	ENSGT00940000159262 #30	ENSGT00510000047559.d.a	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000158921.f.a	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.b
Cow	MODERN SPECIES	11	ENSBTAG00000015077	DPP10 (ENSBTAG00000005235) #7	ACTR3 (ENSBTAG00000003401) #8	SLC35F5 (ENSBTAG00000021103) #9	GPR39 (ENSBTAG00000047036) #10	LYPD1 (ENSBTAG00000005234) #11	NCKAP5 (ENSBTAG00000005238) #12	MGAT5 (ENSBTAG00000018744) #13	TMEM163 (ENSBTAG00000018753) #15	ACMSD (ENSBTAG00000008039) #16	CCNT2 (ENSBTAG00000014158) #17	MAP3K19 (ENSBTAG00000014409) #18	RAB3GAP1 (ENSBTAG00000013449) #19	ENSBTAG00000050570	ZRANB3 (ENSBTAG00000026842) #21	R3HDM1 (ENSBTAG00000013302) #22	UBXN4 (ENSBTAG00000015169) #23	LCT (ENSBTAG00000015170) #24	MCM6 (ENSBTAG00000015172) #25	DARS1 (ENSBTAG00000009949) #26	CXCR4 (ENSBTAG00000001060) #27	ENSBTAG00000021755	THSD7B (ENSBTAG00000044055) #30	ENSBTAG00000039437	HNMT (ENSBTAG00000014432) #31	ENSBTAG00000050067	ENSBTAG00000001627	SPOPL (ENSBTAG00000013455)	NXPH2 (ENSBTAG00000018147) #34	ENSBTAG00000017629	LRP1B (ENSBTAG00000024632) #37
Hybrid Bos Indicus	MODERN SPECIES	11	ENSBIXG00005013476 #10	ENSBIXG00005001622 #10	ENSBIXG00005001628	ENSBIXG00005013529	NCKAP5 (ENSBIXG00005013828) #12	ENSBIXG00005013944	ENSBIXG00005014012	MGAT5 (ENSBIXG00005014057) #13	TMEM163 (ENSBIXG00005001832) #15	ACMSD (ENSBIXG00005014175) #16	CCNT2 (ENSBIXG00005014240) #17	MAP3K19 (ENSBIXG00005014314) #18	ENSBIXG00005014335	RAB3GAP1 (ENSBIXG00005001936) #19	ZRANB3 (ENSBIXG00005014603) #21	R3HDM1 (ENSBIXG00005002094) #22	UBXN4 (ENSBIXG00005014833) #23	LCT (ENSBIXG00005014879) #24	MCM6 (ENSBIXG00005002156) #25	DARS1 (ENSBIXG00005002198) #26	CXCR4 (ENSBIXG00005015020) #27	ENSBIXG00005015049	THSD7B (ENSBIXG00005015144) #30	ENSBIXG00005015215	HNMT (ENSBIXG00005015241) #31	SPOPL (ENSBIXG00005015294)	ENSBIXG00005015307	NXPH2 (ENSBIXG00005015323) #34	ENSBIXG00005015329	ENSBIXG00005015364	LRP1B (ENSBIXG00005015953) #37
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.b	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.b.a.a.b.b.a.b.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT01100000263481.n.a.b.b.b.b	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00950000183123.g.a.a.b.fb.b	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000153272.a.b.z.a.a.a.b	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Wild yak	MODERN SPECIES	1099								MGAT5 (ENSBMUG00000004831) #13	TMEM163 (ENSBMUG00000004912) #15	ACMSD (ENSBMUG00000005007) #16	CCNT2 (ENSBMUG00000005057) #17	MAP3K19 (ENSBMUG00000005112) #18	RAB3GAP1 (ENSBMUG00000005189) #19	ENSBMUG00000005223	ZRANB3 (ENSBMUG00000005275) #21	R3HDM1 (ENSBMUG00000005365) #22	UBXN4 (ENSBMUG00000005427) #23	LCT (ENSBMUG00000005438) #24	MCM6 (ENSBMUG00000005454) #25	DARS1 (ENSBMUG00000005489) #26
Domestic yak	MODERN SPECIES	11	LYPD1 (ENSBGRG00000000260) #11	ENSBGRG00000000269 #10	NCKAP5 (ENSBGRG00000000305) #12	ENSBGRG00000000477	ENSBGRG00000000483	ENSBGRG00000000489	ENSBGRG00000000496	MGAT5 (ENSBGRG00000000528) #13	TMEM163 (ENSBGRG00000000610) #15	ACMSD (ENSBGRG00000000653) #16	CCNT2 (ENSBGRG00000000712) #17	MAP3K19 (ENSBGRG00000000787) #18	RAB3GAP1 (ENSBGRG00000000816) #19	ENSBGRG00000000905	ZRANB3 (ENSBGRG00000000920) #21	R3HDM1 (ENSBGRG00000000982) #22	UBXN4 (ENSBGRG00000001196) #23	LCT (ENSBGRG00000001231) #24	MCM6 (ENSBGRG00000001270) #25	DARS1 (ENSBGRG00000001296) #26	CXCR4 (ENSBGRG00000001345) #27	ENSBGRG00000001353	THSD7B (ENSBGRG00000001374) #30	ENSBGRG00000001431	HNMT (ENSBGRG00000001443) #31	ENSBGRG00000001460	ENSBGRG00000001465	ENSBGRG00000001471	SPOPL (ENSBGRG00000001482)	NXPH2 (ENSBGRG00000001512) #34	ENSBGRG00000001517
American bison	MODERN SPECIES	3244			ACTR3 (ENSBBBG00000013025) #8	SLC35F5 (ENSBBBG00000002588) #9	ENSBBBG00000012949 #10	ENSBBBG00000002561 #10	LYPD1 (ENSBBBG00000012944) #11	NCKAP5 (ENSBBBG00000012933) #12	MGAT5 (ENSBBBG00000012893) #13	TMEM163 (ENSBBBG00000012878) #15	ACMSD (ENSBBBG00000012859) #16	CCNT2 (ENSBBBG00000001744) #17	MAP3K19 (ENSBBBG00000002510) #18	RAB3GAP1 (ENSBBBG00000002477) #19	ZRANB3 (ENSBBBG00000012735) #21	R3HDM1 (ENSBBBG00000012694) #22	UBXN4 (ENSBBBG00000012566) #23	LCT (ENSBBBG00000012549) #24	ENSBBBG00000012538 #25	DARS1 (ENSBBBG00000002399) #26	CXCR4 (ENSBBBG00000012508) #27	THSD7B (ENSBBBG00000012491) #30	HNRNPA1L2 (ENSBBBG00000002385)	HNMT (ENSBBBG00000002381) #31	ENSBBBG00000002376	SPOPL (ENSBBBG00000012429)	NXPH2 (ENSBBBG00000012418) #34	ENSBBBG00000012412	LRP1B (ENSBBBG00000012403) #37	ENSBBBG00000002337	KYNU (ENSBBBG00000012350)
Siberian musk deer	MODERN SPECIES	346										ACMSD (ENSMMSG00000022603) #16	CCNT2 (ENSMMSG00000022579) #17	MAP3K19 (ENSMMSG00000022186) #18	RAB3GAP1 (ENSMMSG00000021868) #19	ENSMMSG00000021832	ZRANB3 (ENSMMSG00000021800) #21	R3HDM1 (ENSMMSG00000020848) #22	UBXN4 (ENSMMSG00000020749) #23	LCT (ENSMMSG00000020663) #24	MCM6 (ENSMMSG00000020619) #25	DARS1 (ENSMMSG00000020589) #26	CXCR4 (ENSMMSG00000020562) #27	THSD7B (ENSMMSG00000020400) #30	ENSMMSG00000020372	HNMT (ENSMMSG00000020352) #31	SPOPL (ENSMMSG00000020288)	NXPH2 (ENSMMSG00000020261) #34	ENSMMSG00000020252	ENSMMSG00000020234	ENSMMSG00000020212	ENSMMSG00000020194	LRP1B (ENSMMSG00000019882) #37
Camelidae	ANCESTRAL SPECIES	16	ENSGT00500000045852	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a	ENSGT01020000230615
Arabian camel	MODERN SPECIES	31	ACTR3 (ENSCDRG00005015049) #8	SLC35F5 (ENSCDRG00005015269) #9	ENSCDRG00005015625 #10	ENSCDRG00005015665 #10	LYPD1 (ENSCDRG00005015681) #11	NCKAP5 (ENSCDRG00005015750) #12	ENSCDRG00005016005	MGAT5 (ENSCDRG00005016077) #13	TMEM163 (ENSCDRG00005016133) #15	ACMSD (ENSCDRG00005016206) #16	CCNT2 (ENSCDRG00005016294) #17	MAP3K19 (ENSCDRG00005016388) #18	RAB3GAP1 (ENSCDRG00005017183) #19	ZRANB3 (ENSCDRG00005018185) #21	ENSCDRG00005018272	R3HDM1 (ENSCDRG00005018316) #22	UBXN4 (ENSCDRG00005018623) #23	LCT (ENSCDRG00005018741) #24	MCM6 (ENSCDRG00005018797) #25	DARS1 (ENSCDRG00005018847) #26	CXCR4 (ENSCDRG00005018891) #27	THSD7B (ENSCDRG00005018936) #30	HNMT (ENSCDRG00005019111) #31	SPOPL (ENSCDRG00005019127)	ENSCDRG00005019157	NXPH2 (ENSCDRG00005019171) #34	LRP1B (ENSCDRG00005019331) #37	KYNU (ENSCDRG00005021006)	ARHGAP15 (ENSCDRG00005021017)	GTDC1 (ENSCDRG00005021037)	ZEB2 (ENSCDRG00005021107)
Alpaca	MODERN SPECIES	623																R3HDM1 (ENSVPAG00000007333) #22	UBXN4 (ENSVPAG00000007336) #23	LCT (ENSVPAG00000007339) #24	MCM6 (ENSVPAG00000007346) #25	DARS1 (ENSVPAG00000007350) #26
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Carnivora	ANCESTRAL SPECIES	17	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Caniformia	ANCESTRAL SPECIES	14	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Canidae	ANCESTRAL SPECIES	56	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000002565.k.a	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Canis_lupus	ANCESTRAL SPECIES	46	ENSGT00940000155065 #8	ENSGT00390000002565.k.a	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00940000158012.c.a.a.a	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Dingo	MODERN SPECIES	101	ENSCAFG00020015636	SLC35F5 (ENSCAFG00020015641) #9	ENSCAFG00020015676	GPR39 (ENSCAFG00020015677) #10	ENSCAFG00020015678	ENSCAFG00020015681	LYPD1 (ENSCAFG00020015684) #11	ENSCAFG00020015687 #12	ENSCAFG00020015709 #13	TMEM163 (ENSCAFG00020015719) #15	ACMSD (ENSCAFG00020015725) #16	CCNT2 (ENSCAFG00020015731) #17	ENSCAFG00020015733 #18	RAB3GAP1 (ENSCAFG00020015740) #19	ZRANB3 (ENSCAFG00020016080) #21	R3HDM1 (ENSCAFG00020016119) #22	UBXN4 (ENSCAFG00020016138) #23	LCT (ENSCAFG00020016158) #24	MCM6 (ENSCAFG00020016161) #25	DARS1 (ENSCAFG00020016165) #26	CXCR4 (ENSCAFG00020016170) #27	THSD7B (ENSCAFG00020016172) #30	HNMT (ENSCAFG00020016185) #31	SPOPL (ENSCAFG00020016186)	NXPH2 (ENSCAFG00020016197) #34	ENSCAFG00020016205	LRP1B (ENSCAFG00020016211) #37	ENSCAFG00020016252	KYNU (ENSCAFG00020016256)	ARHGAP15 (ENSCAFG00020016269)	GTDC1 (ENSCAFG00020016302)
Dog	MODERN SPECIES	10	ENSCAFG00845006717	ENSCAFG00845006783 #9	ENSCAFG00845006840	ENSCAFG00845006855 #10	ENSCAFG00845006875	ENSCAFG00845006921 #11	NCKAP5 (ENSCAFG00845007269) #12	ENSCAFG00845007813	MGAT5 (ENSCAFG00845007969) #13	TMEM163 (ENSCAFG00845008028) #15	ACMSD (ENSCAFG00845008146) #16	CCNT2 (ENSCAFG00845008293) #17	MAP3K19 (ENSCAFG00845008480) #18	RAB3GAP1 (ENSCAFG00845008763) #19	ZRANB3 (ENSCAFG00845009173) #21	R3HDM1 (ENSCAFG00845009448) #22	UBXN4 (ENSCAFG00845009744) #23	LCT (ENSCAFG00845009807) #24	MCM6 (ENSCAFG00845009951) #25	DARS1 (ENSCAFG00845010085) #26	ENSCAFG00845010172 #27	THSD7B (ENSCAFG00845010239) #30	HNMT (ENSCAFG00845010412) #31	SPOPL (ENSCAFG00845010518)	NXPH2 (ENSCAFG00845010560) #34	LRP1B (ENSCAFG00845011094) #37	ENSCAFG00845013405	ENSCAFG00845013421	ENSCAFG00845013470	KYNU (ENSCAFG00845013520)	ARHGAP15 (ENSCAFG00845013638)
Red fox	MODERN SPECIES	113	DPP10 (ENSVVUG00000006103) #7	ACTR3 (ENSVVUG00000006155) #8	ENSVVUG00000006163	ENSVVUG00000006164 #9	ENSVVUG00000006174	LYPD1 (ENSVVUG00000006177) #11	NCKAP5 (ENSVVUG00000006181) #12	MGAT5 (ENSVVUG00000006220) #13	TMEM163 (ENSVVUG00000006244) #15	ACMSD (ENSVVUG00000006257) #16	CCNT2 (ENSVVUG00000006262) #17	MAP3K19 (ENSVVUG00000006280) #18	RAB3GAP1 (ENSVVUG00000006300) #19	ZRANB3 (ENSVVUG00000006362) #21	ENSVVUG00000006450	R3HDM1 (ENSVVUG00000006457) #22	UBXN4 (ENSVVUG00000006542) #23	LCT (ENSVVUG00000006793) #24	MCM6 (ENSVVUG00000007061) #25	DARS (ENSVVUG00000007081) #26	CXCR4 (ENSVVUG00000007094) #27
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Ursidae	ANCESTRAL SPECIES	7	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00900000143214
Ursus	ANCESTRAL SPECIES	162			ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a
Polar bear	MODERN SPECIES	196			ACTR3 (ENSUMAG00000004954) #8	SLC35F5 (ENSUMAG00000005121) #9	GPR39 (ENSUMAG00000005134) #10	ENSUMAG00000005137	LYPD1 (ENSUMAG00000005139) #11	ENSUMAG00000005144 #12	MGAT5 (ENSUMAG00000005172) #13	TMEM163 (ENSUMAG00000005181) #15	ACMSD (ENSUMAG00000005196) #16	CCNT2 (ENSUMAG00000005230) #17	ENSUMAG00000005240 #18	RAB3GAP1 (ENSUMAG00000005260) #19	ZRANB3 (ENSUMAG00000005407) #21	R3HDM1 (ENSUMAG00000005552) #22	UBXN4 (ENSUMAG00000005565) #23	LCT (ENSUMAG00000005573) #24	MCM6 (ENSUMAG00000005636) #25	DARS1 (ENSUMAG00000005942) #26	CXCR4 (ENSUMAG00000005945) #27	THSD7B (ENSUMAG00000005964) #30	HNMT (ENSUMAG00000006034) #31	SPOPL (ENSUMAG00000006049)	NXPH2 (ENSUMAG00000006056) #34	LRP1B (ENSUMAG00000006142) #37	ENSUMAG00000006335	ENSUMAG00000006341	KYNU (ENSUMAG00000006355)	ARHGAP15 (ENSUMAG00000006377)	GTDC1 (ENSUMAG00000006399)
American black bear	MODERN SPECIES	5051																R3HDM1 (ENSUAMG00000024806) #22
Giant Panda	MODERN SPECIES	11	ENSAMEG00000029074	DDX18 (ENSAMEG00000012626)	DPP10 (ENSAMEG00000016502) #7	ACTR3 (ENSAMEG00000014979) #8	ENSAMEG00000003041 #9	ENSAMEG00000003064 #10	ENSAMEG00000003070 #11	NCKAP5 (ENSAMEG00000015179) #12	MGAT5 (ENSAMEG00000016315) #13	TMEM163 (ENSAMEG00000016323) #15	ACMSD (ENSAMEG00000016329) #16	CCNT2 (ENSAMEG00000016341) #17	MAP3K19 (ENSAMEG00000016364) #18	RAB3GAP1 (ENSAMEG00000016369) #19	ZRANB3 (ENSAMEG00000016419) #21	R3HDM1 (ENSAMEG00000014886) #22	UBXN4 (ENSAMEG00000003672) #23	LCT (ENSAMEG00000005800) #24	MCM6 (ENSAMEG00000005841) #25	DARS1 (ENSAMEG00000005881) #26	CXCR4 (ENSAMEG00000019163) #27	THSD7B (ENSAMEG00000014390) #30	SPOPL (ENSAMEG00000002595)	NXPH2 (ENSAMEG00000015387) #34	LRP1B (ENSAMEG00000012450) #37	ENSAMEG00000012519	KYNU (ENSAMEG00000013126)	ARHGAP15 (ENSAMEG00000013114)	GTDC1 (ENSAMEG00000013100)	ENSAMEG00000028035	ZEB2 (ENSAMEG00000009337)
Mustelinae	ANCESTRAL SPECIES	154			ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34
American mink	MODERN SPECIES	93										ACMSD (ENSNVIG00000014719) #16	CCNT2 (ENSNVIG00000014690) #17	ENSNVIG00000014683 #18	RAB3GAP1 (ENSNVIG00000014588) #19	ZRAB3 (ENSNVIG00000014442) #21	ENSNVIG00000014428	R3HDM1 (ENSNVIG00000014091) #22	UBXN4 (ENSNVIG00000014041) #23	LCT (ENSNVIG00000013999) #24	MCM6 (ENSNVIG00000013989) #25	DARS1 (ENSNVIG00000013966) #26	CXCR4 (ENSNVIG00000013959) #27	THSD7B (ENSNVIG00000013908) #30	HNMT (ENSNVIG00000013889) #31	SPOPL (ENSNVIG00000013883)	NXPH2 (ENSNVIG00000013872) #34	ENSNVIG00000013867	LRP1B (ENSNVIG00000013726) #37
Ferret	MODERN SPECIES	356									MGAT5 (ENSMPUG00000002586) #13	TMEM163 (ENSMPUG00000002580) #15	ACMSD (ENSMPUG00000002552) #16	CCNT2 (ENSMPUG00000002548) #17	MAP3K19 (ENSMPUG00000002541) #18	RAB3GAP1 (ENSMPUG00000002536) #19	ZRANB3 (ENSMPUG00000002528) #21	R3HDM1 (ENSMPUG00000002412) #22	UBXN4 (ENSMPUG00000002362) #23	LCT (ENSMPUG00000002320) #24	MCM6 (ENSMPUG00000002265) #25	DARS1 (ENSMPUG00000002259) #26	CXCR4 (ENSMPUG00000002256) #27	THSD7B (ENSMPUG00000002246) #30
Felidae	ANCESTRAL SPECIES	15	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT01100000263767.a.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000004755.z	ENSGT01100000263767.a.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000008903.m.a.a.b	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00390000004755.z	ENSGT01100000263767.a.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000008903.m.a.a.b	ENSGT00910000147617	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b
lion	MODERN SPECIES	8	DPP10 (ENSPLOG00000008097) #7	ACTR3 (ENSPLOG00000007973) #8	SLC35F5 (ENSPLOG00000007783) #9	GPR39 (ENSPLOG00000007748) #10	LYPD1 (ENSPLOG00000007721) #11	NCKAP5 (ENSPLOG00000007593) #12	ENSPLOG00000007558	ENSPLOG00000007548	MGAT5 (ENSPLOG00000007485) #13	TMEM163 (ENSPLOG00000007370) #15	ACMSD (ENSPLOG00000007318) #16	CCNT2 (ENSPLOG00000007236) #17	MAP3K19 (ENSPLOG00000007107) #18	RAB3GAP1 (ENSPLOG00000006997) #19	ZRANB3 (ENSPLOG00000006791) #21	R3HDM1 (ENSPLOG00000006513) #22	UBXN4 (ENSPLOG00000006259) #23	LCT (ENSPLOG00000006123) #24	MCM6 (ENSPLOG00000006081) #25	DARS1 (ENSPLOG00000006015) #26	CXCR4 (ENSPLOG00000005971) #27	ENSPLOG00000005961	ENSPLOG00000005948	ENSPLOG00000005928	THSD7B (ENSPLOG00000005685) #30	HNMT (ENSPLOG00000005608) #31	SPOPL (ENSPLOG00000005460)	NXPH2 (ENSPLOG00000005437) #34	ENSPLOG00000005421	LRP1B (ENSPLOG00000005161) #37	ENSPLOG00000005011
leopard	MODERN SPECIES	1		ACTR3 (ENSPPRG00000004002) #8	SLC35F5 (ENSPPRG00000003697) #9	GPR39 (ENSPPRG00000001979) #10	LYPD1 (ENSPPRG00000001456) #11	NCKAP5 (ENSPPRG00000001014) #12	ENSPPRG00000018156	MGAT5 (ENSPPRG00000022919) #13	TMEM163 (ENSPPRG00000017089) #15	ACMSD (ENSPPRG00000014298) #16	CCNT2 (ENSPPRG00000013025) #17	ENSPPRG00000012476 #18	RAB3GAP1 (ENSPPRG00000009297) #19	ENSPPRG00000006436	ZRANB3 (ENSPPRG00000006011) #21	R3HDM1 (ENSPPRG00000002626) #22	UBXN4 (ENSPPRG00000000615) #23	LCT (ENSPPRG00000022850) #24	MCM6 (ENSPPRG00000023335) #25	DARS1 (ENSPPRG00000024294) #26	CXCR4 (ENSPPRG00000024427) #27	THSD7B (ENSPPRG00000024481) #30	HNMT (ENSPPRG00000013385) #31	SPOPL (ENSPPRG00000013080)	NXPH2 (ENSPPRG00000012365) #34	ENSPPRG00000012169	ENSPPRG00000017377	ENSPPRG00000017355	LRP1B (ENSPPRG00000009154) #37	KYNU (ENSPPRG00000004587)	ARHGAP15 (ENSPPRG00000003769)
Tiger	MODERN SPECIES	593	ACTR3 (ENSPTIG00000017206) #8	SLC35F5 (ENSPTIG00000017961) #9	GPR39 (ENSPTIG00000020659) #10	LYPD1 (ENSPTIG00000020835) #11	NCKAP5 (ENSPTIG00000021077) #12	ENSPTIG00000002860	MGAT5 (ENSPTIG00000004901) #13	TMEM163 (ENSPTIG00000006597) #15	ACMSD (ENSPTIG00000007502) #16	CCNT2 (ENSPTIG00000008723) #17	ENSPTIG00000010805 #18	RAB3GAP1 (ENSPTIG00000012072) #19	ENSPTIG00000013887	ZRANB3 (ENSPTIG00000014207) #21	ENSPTIG00000016006	R3HDM1 (ENSPTIG00000016581) #22	UBXN4 (ENSPTIG00000019414) #23	LCT (ENSPTIG00000020184) #24	MCM6 (ENSPTIG00000020771) #25	DARS1 (ENSPTIG00000004863) #26
Cat	MODERN SPECIES	239	SLC35F5 (ENSFCAG00000023214) #9	GPR39 (ENSFCAG00000000023) #10	LYPD1 (ENSFCAG00000000024) #11	NCKAP5 (ENSFCAG00000004991) #12	ENSFCAG00000047696	ENSFCAG00000045530	ENSFCAG00000042540	ENSFCAG00000048299	MGAT5 (ENSFCAG00000015759) #13	TMEM163 (ENSFCAG00000045338) #15	ACMSD (ENSFCAG00000003955) #16	CCNT2 (ENSFCAG00000003956) #17	MAP3K19 (ENSFCAG00000026221) #18	RAB3GAP1 (ENSFCAG00000040704) #19	ZRANB3 (ENSFCAG00000024830) #21	R3HDM1 (ENSFCAG00000027113) #22	UBXN4 (ENSFCAG00000031029) #23	LCT (ENSFCAG00000009430) #24	MCM6 (ENSFCAG00000013595) #25	DARS1 (ENSFCAG00000014295) #26	CXCR4 (ENSFCAG00000015575) #27	THSD7B (ENSFCAG00000013556) #30	HNMT (ENSFCAG00000022918) #31	SPOPL (ENSFCAG00000040800)	NXPH2 (ENSFCAG00000039021) #34	LRP1B (ENSFCAG00000026584) #37	KYNU (ENSFCAG00000018501)	ARHGAP15 (ENSFCAG00000011613)	GTDC1 (ENSFCAG00000012314)	ZEB2 (ENSFCAG00000015532)	ENSFCAG00000022964
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000164988	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00910000147897
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000164988	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00910000147897	ENSGT00950000183208.A.c.a
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000164988	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00910000147897	ENSGT00950000183208.A.c.a
Microbat	MODERN SPECIES	1249														ZRANB3 (ENSMLUG00000009977) #21	ENSMLUG00000022672	R3HDM1 (ENSMLUG00000013824) #22	UBXN4 (ENSMLUG00000013842) #23	LCT (ENSMLUG00000013850) #24	MCM6 (ENSMLUG00000013864) #25	DARS1 (ENSMLUG00000005671) #26	CXCR4 (ENSMLUG00000005717) #27
Greater horseshoe bat	MODERN SPECIES	26	DDX18 (ENSRFEG00010009499)	ENSRFEG00010009464	DPP10 (ENSRFEG00010008979) #7	ACTR3 (ENSRFEG00010008856) #8	SLC35F5 (ENSRFEG00010008610) #9	GPR39 (ENSRFEG00010008578) #10	ENSRFEG00010008520 #11	NCKAP5 (ENSRFEG00010008169) #12	MGAT5 (ENSRFEG00010008097) #13	TMEM163 (ENSRFEG00010008075) #15	ACMSD (ENSRFEG00010007914) #16	CCNT2 (ENSRFEG00010007854) #17	MAP3K19 (ENSRFEG00010007402) #18	RAB3GAP1 (ENSRFEG00010007081) #19	ZRANB3 (ENSRFEG00010006895) #21	R3HDM1 (ENSRFEG00010006460) #22	UBXN4 (ENSRFEG00010006282) #23	LCT (ENSRFEG00010006250) #24	ENSRFEG00010006221	ENSRFEG00010006205	MCM6 (ENSRFEG00010006164) #25	ENSRFEG00010006141	DARS1 (ENSRFEG00010006082) #26	ENSRFEG00010006026	CXCR4 (ENSRFEG00010006005) #27	ENSRFEG00010005984	THSD7B (ENSRFEG00010005956) #30	HNMT (ENSRFEG00010005923) #31	ENSRFEG00010005902	SPOPL (ENSRFEG00010005880)	NXPH2 (ENSRFEG00010005863) #34
Megabat	MODERN SPECIES	256															ZRANB3 (ENSPVAG00000006096) #21	R3HDM1 (ENSPVAG00000006098) #22	UBXN4 (ENSPVAG00000006099) #23
Equus	ANCESTRAL SPECIES	18	ENSGT00500000045852	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00390000000805.h	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Donkey	MODERN SPECIES	24	ENSEASG00005025997	DPP10 (ENSEASG00005002144) #7	ENSEASG00005007495 #8	ENSEASG00005007490 #9	ENSEASG00005026537 #10	ENSEASG00005007486 #11	NCKAP5 (ENSEASG00005007468) #12	MGAT5 (ENSEASG00005007448) #13	TMEM163 (ENSEASG00005007445) #15	ACMSD (ENSEASG00005007438) #16	CCNT2 (ENSEASG00005007433) #17	MAP3K19 (ENSEASG00005007431) #18	RAB3GAP1 (ENSEASG00005007419) #19	ENSEASG00005007411	ZRANB3 (ENSEASG00005007414) #21	R3HDM1 (ENSEASG00005007392) #22	UBXN4 (ENSEASG00005007369) #23	LCT (ENSEASG00005007363) #24	ENSEASG00005007359	MCM6 (ENSEASG00005007355) #25	ENSEASG00005034643	DARS1 (ENSEASG00005007349) #26	CXCR4 (ENSEASG00005007346) #27	THSD7B (ENSEASG00005007338) #30	HNMT (ENSEASG00005007333) #31	ENSEASG00005026069	SPOPL (ENSEASG00005007329)	NXPH2 (ENSEASG00005034518) #34	LRP1B (ENSEASG00005023483) #37	KYNU (ENSEASG00005023479)	ARHGAP15 (ENSEASG00005023473)
Horse	MODERN SPECIES	9	ENSECAG00000053929	DPP10 (ENSECAG00000000161) #7	ACTR3 (ENSECAG00000020867) #8	SLC35F5 (ENSECAG00000009292) #9	GPR39 (ENSECAG00000005577) #10	LYPD1 (ENSECAG00000026896) #11	NCKAP5 (ENSECAG00000017122) #12	MGAT5 (ENSECAG00000019492) #13	TMEM163 (ENSECAG00000017568) #15	ACMSD (ENSECAG00000017797) #16	CCNT2 (ENSECAG00000022763) #17	MAP3K19 (ENSECAG00000009919) #18	RAB3GAP1 (ENSECAG00000012270) #19	ENSECAG00000057824	ZRANB3 (ENSECAG00000011232) #21	R3HDM1 (ENSECAG00000019114) #22	UBXN4 (ENSECAG00000008941) #23	LCT (ENSECAG00000018594) #24	ENSECAG00000007662	MCM6 (ENSECAG00000008840) #25	DARS1 (ENSECAG00000024197) #26	CXCR4 (ENSECAG00000003837) #27	THSD7B (ENSECAG00000007595) #30	HNMT (ENSECAG00000011592) #31	ENSECAG00000031440	SPOPL (ENSECAG00000013631)	NXPH2 (ENSECAG00000023822) #34	LRP1B (ENSECAG00000012212) #37	ENSECAG00000052918	KYNU (ENSECAG00000018188)	ARHGAP15 (ENSECAG00000012312)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156095 #22
Common shrew	MODERN SPECIES	5728																ENSSARG00000000352 #22	ENSSARG00000000356
Hedgehog	MODERN SPECIES	3189																R3HDM1 (ENSEEUG00000012589) #22
Atlantogenata	ANCESTRAL SPECIES	9			ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a
Afrotheria	ANCESTRAL SPECIES	1			ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a
Afrotheria_a	ANCESTRAL SPECIES	1			ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a
Elephant	MODERN SPECIES	301	ENSLAFG00000025579	DPP10 (ENSLAFG00000010652) #7	ACTR3 (ENSLAFG00000013354) #8	SLC35F5 (ENSLAFG00000006974) #9	GPR39 (ENSLAFG00000004083) #10	ENSLAFG00000026153	LYPD1 (ENSLAFG00000020596) #11	NCKAP5 (ENSLAFG00000014359) #12	MGAT5 (ENSLAFG00000016247) #13	TMEM163 (ENSLAFG00000006542) #15	ACMSD (ENSLAFG00000008025) #16	CCNT2 (ENSLAFG00000008029) #17	MAP3K19 (ENSLAFG00000008034) #18	RAB3GAP1 (ENSLAFG00000012024) #19	ZRANB3 (ENSLAFG00000015733) #21	R3HDM1 (ENSLAFG00000009065) #22	UBXN4 (ENSLAFG00000009074) #23	LCT (ENSLAFG00000009081) #24	MCM6 (ENSLAFG00000009089) #25	DARS1 (ENSLAFG00000015092) #26	CXCR4 (ENSLAFG00000006285) #27	THSD7B (ENSLAFG00000010588) #30	HNMT (ENSLAFG00000010262) #31	SPOPL (ENSLAFG00000001640)	NXPH2 (ENSLAFG00000011361) #34	LRP1B (ENSLAFG00000014282) #37	ENSLAFG00000029177	KYNU (ENSLAFG00000002172)	ARHGAP15 (ENSLAFG00000006748)	GTDC1 (ENSLAFG00000010261)	ZEB2 (ENSLAFG00000008960)
Hyrax	MODERN SPECIES	2789																R3HDM1 (ENSPCAG00000006208) #22
Tenrec	MODERN SPECIES	2812																R3HDM1 (ENSETEG00000013606) #22	ENSETEG00000013613	LCT (ENSETEG00000013617) #24
Xenarthra	ANCESTRAL SPECIES	274									ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262.e #30
Sloth	MODERN SPECIES	3012																R3HDM1 (ENSCHOG00000013638) #22
Armadillo	MODERN SPECIES	4110								MGAT5 (ENSDNOG00000012857) #13	ENSDNOG00000037604	TMEM163 (ENSDNOG00000000647) #15	ACMSD (ENSDNOG00000044611) #16	CCNT2 (ENSDNOG00000016858) #17	MAP3K19 (ENSDNOG00000023934) #18	RAB3GAP1 (ENSDNOG00000010284) #19	ZRANB3 (ENSDNOG00000013613) #21	R3HDM1 (ENSDNOG00000000771) #22	ENSDNOG00000031666	UBXN4 (ENSDNOG00000033460) #23	LCT (ENSDNOG00000016729) #24	MCM6 (ENSDNOG00000007966) #25	DARS1 (ENSDNOG00000017874) #26	CXCR4 (ENSDNOG00000008947) #27	ENSDNOG00000019824 #30	ENSDNOG00000047256
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00390000017405.j	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00390000017405.j	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Diprotodontia	ANCESTRAL SPECIES	40				ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000017405.j	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Diprotodontia_a	ANCESTRAL SPECIES	39				ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00390000017405.j	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
koala	MODERN SPECIES	136			ACTR3 (ENSPCIG00000024570) #8	SLC35F5 (ENSPCIG00000024574) #9	ENSPCIG00000019348 #10	ENSPCIG00000024445 #10	LYPD1 (ENSPCIG00000024444) #11	NCKAP5 (ENSPCIG00000024443) #12	MGAT5 (ENSPCIG00000000463) #13	TMEM163 (ENSPCIG00000002266) #15	ACMSD (ENSPCIG00000002314) #16	CCNT2 (ENSPCIG00000002354) #17	ENSPCIG00000002384 #18	RAB3GAP1 (ENSPCIG00000002406) #19	ZRANB3 (ENSPCIG00000002444) #21	R3HDM1 (ENSPCIG00000002491) #22	UBXN4 (ENSPCIG00000006935) #23	ENSPCIG00000034112 #24	ENSPCIG00000006860	MCM6 (ENSPCIG00000006849) #25	DARS1 (ENSPCIG00000006838) #26	CXCR4 (ENSPCIG00000006829) #27	THSD7B (ENSPCIG00000023799) #30	HNMT (ENSPCIG00000002244) #31	ENSPCIG00000028189	SPOPL (ENSPCIG00000009718)	NXPH2 (ENSPCIG00000009717) #34
Common wonbat	MODERN SPECIES	1052		ACTR3 (ENSVURG00010007571) #8	ENSVURG00010007545 #9	ENSVURG00010007531 #10	ENSVURG00010007526 #10	ENSVURG00010007522 #11	NCKAP5 (ENSVURG00010007509) #12	ENSVURG00010007490	MGAT5 (ENSVURG00010007438) #13	TMEM163 (ENSVURG00010007413) #15	ACMSD (ENSVURG00010007395) #16	CCNT2 (ENSVURG00010007382) #17	ENSVURG00010007369 #18	RAB3GAP1 (ENSVURG00010007322) #19	ZRANB3 (ENSVURG00010007305) #21	R3HDM1 (ENSVURG00010007024) #22	UBXN4 (ENSVURG00010006987) #23	ENSVURG00010006984 #24	MCM6 (ENSVURG00010006973) #25	DARS1 (ENSVURG00010006955) #26	CXCR4 (ENSVURG00010006950) #27	THSD7B (ENSVURG00010006259) #30	HNMT (ENSVURG00010006155) #31	SPOPL (ENSVURG00010006130)	NXPH2 (ENSVURG00010006116) #34	ENSVURG00010006068	ENSVURG00010006058	LRP1B (ENSVURG00010005875) #37	KYNU (ENSVURG00010005735)	ARHGAP15 (ENSVURG00010005719)	GTDC1 (ENSVURG00010005548)
Wallaby	MODERN SPECIES	4347																R3HDM1 (ENSMEUG00000011784) #22
Tasmanian devil	MODERN SPECIES	2	DDX18 (ENSSHAG00000018781)	ENSSHAG00000000873	DPP10 (ENSSHAG00000010186) #7	ENSSHAG00000013117 #8	ENSSHAG00000002800 #9	ENSSHAG00000024127 #10	ENSSHAG00000008832 #11	NCKAP5 (ENSSHAG00000009085) #12	MGAT5 (ENSSHAG00000013191) #13	TMEM163 (ENSSHAG00000014154) #15	ACMSD (ENSSHAG00000025004) #16	CCNT2 (ENSSHAG00000015774) #17	ENSSHAG00000015928 #18	RAB3GAP1 (ENSSHAG00000016199) #19	ZRANB3 (ENSSHAG00000016465) #21	R3HDM1 (ENSSHAG00000016999) #22	ENSSHAG00000017244	LCT (ENSSHAG00000017319) #24	MCM6 (ENSSHAG00000000346) #25	DARS1 (ENSSHAG00000001175) #26	CXCR4 (ENSSHAG00000008142) #27	THSD7B (ENSSHAG00000026453) #30	HNMT (ENSSHAG00000030767) #31	SPOPL (ENSSHAG00000014908)	NXPH2 (ENSSHAG00000024763) #34	ENSSHAG00000031146	ENSSHAG00000025518	LRP1B (ENSSHAG00000004225) #37	KYNU (ENSSHAG00000009141)	ARHGAP15 (ENSSHAG00000010666)	GTDC1 (ENSSHAG00000015344)
Opossum	MODERN SPECIES	3	SLC35F5 (ENSMODG00000000615) #9	ENSMODG00000024920 #10	ENSMODG00000039684 #10	LYPD1 (ENSMODG00000000657) #11	NCKAP5 (ENSMODG00000024919) #12	ENSMODG00000039758	MGAT5 (ENSMODG00000000690) #13	TMEM163 (ENSMODG00000000704) #15	ENSMODG00000024415	ACMSD (ENSMODG00000000715) #16	CCNT2 (ENSMODG00000000727) #17	ENSMODG00000000785 #18	RAB3GAP1 (ENSMODG00000000835) #19	ENSMODG00000038786	ZRANB3 (ENSMODG00000000848) #21	R3HDM1 (ENSMODG00000000923) #22	ENSMODG00000000944	ENSMODG00000000972 #24	ENSMODG00000051171 #24	ENSMODG00000044474	MCM6 (ENSMODG00000000989) #25	DARS1 (ENSMODG00000001056) #26	CXCR4 (ENSMODG00000040906) #27	ENSMODG00000042094	ENSMODG00000047561	THSD7B (ENSMODG00000001131) #30	ENSMODG00000036842 #31	ENSMODG00000027661	SPOPL (ENSMODG00000001195)	NXPH2 (ENSMODG00000001201) #34	ENSMODG00000043501
Platypus	MODERN SPECIES	20									MGAT5 (ENSOANG00000007291) #13	ENSOANG00000036200 #15	ACMSD (ENSOANG00000012396) #16	ENSOANG00000032812 #18	CCNT2 (ENSOANG00000002760) #17	RAB3GAP1 (ENSOANG00000007985) #19	ZRANB3 (ENSOANG00000007986) #21	R3HDM1 (ENSOANG00000007987) #22	ENSOANG00000007554	LCT (ENSOANG00000007555) #24	MCM6 (ENSOANG00000007988) #25	DARS1 (ENSOANG00000007989) #26	CXCR4 (ENSOANG00000007993) #27	ENSOANG00000041192	THSD7B (ENSOANG00000007994) #30	ENSOANG00000048355 #31	HNMT (ENSOANG00000007995) #31	SPOPL (ENSOANG00000050049)	NXPH2 (ENSOANG00000007997) #34	LRP1B (ENSOANG00000007998) #37	KYNU (ENSOANG00000045440)	ARHGAP15 (ENSOANG00000011983)	GTDC1 (ENSOANG00000011982)
Sauria	ANCESTRAL SPECIES		ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555	ENSGT00940000157521.b #37
Aves	ANCESTRAL SPECIES	8	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555	ENSGT00940000157521.b #37
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00500000045852	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Anatidae	ANCESTRAL SPECIES	37	ENSGT00500000045852	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Pink-footed goose	MODERN SPECIES	25	DPP10 (ENSABRG00000001434) #7	ENSABRG00000001742	ACTR3 (ENSABRG00000001760) #8	SLC35F5 (ENSABRG00000001783) #9	GPR39 (ENSABRG00000001844) #10	ENSABRG00000001884	NCKAP5 (ENSABRG00000001938) #12	MGAT5 (ENSABRG00000002157) #13	TMEM163 (ENSABRG00000003073) #15	ACMSD (ENSABRG00000003121) #16	CCNT2 (ENSABRG00000003228) #17	ENSABRG00000003516 #18	ENSABRG00000003526	RAB3GAP1 (ENSABRG00000003654) #19	ZRANB3 (ENSABRG00000005082) #21	R3HDM1 (ENSABRG00000005348) #22	ENSABRG00000005951	ENSABRG00000005965	LCT (ENSABRG00000005980) #24	MCM6 (ENSABRG00000006023) #25	DARS1 (ENSABRG00000006410) #26	CXCR4 (ENSABRG00000007346) #27	THSD7B (ENSABRG00000007388) #30	ENSABRG00000007790 #31	HNMT (ENSABRG00000007808) #31	SPOPL (ENSABRG00000007833)	NXPH2 (ENSABRG00000007844) #34	ENSABRG00000007851	ENSABRG00000007865	ENSABRG00000007871	LRP1B (ENSABRG00000007918) #37
Duck	MODERN SPECIES	25	ENSAPLG00000025537	DDX18 (ENSAPLG00000011648)	DPP10 (ENSAPLG00000012081) #7	ENSAPLG00000028704	ACTR3 (ENSAPLG00000012845) #8	SLC35F5 (ENSAPLG00000013162) #9	GPR39 (ENSAPLG00000013436) #10	NCKAP5 (ENSAPLG00000013464) #12	MGAT5 (ENSAPLG00000013548) #13	TMEM163 (ENSAPLG00000024555) #15	ACMSD (ENSAPLG00000013859) #16	CCNT2 (ENSAPLG00000013992) #17	MAP3K19 (ENSAPLG00000029463) #18	RAB3GAP1 (ENSAPLG00000014149) #19	ZRANB3 (ENSAPLG00000014815) #21	R3HDM1 (ENSAPLG00000015231) #22	ENSAPLG00000026872	ENSAPLG00000030618	LCT (ENSAPLG00000016089) #24	MCM6 (ENSAPLG00000016365) #25	DARS1 (ENSAPLG00000001845) #26	CXCR4 (ENSAPLG00000001879) #27	KCNJ3 (ENSAPLG00000011864)	GALNT13 (ENSAPLG00000011024)	PRPF40A (ENSAPLG00000010600)	FMNL2 (ENSAPLG00000009989)	STAM2 (ENSAPLG00000009755)	CACNB4 (ENSAPLG00000009361)	ARL5A (ENSAPLG00000022181)	ENSAPLG00000007227	ENSAPLG00000029124
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00390000011294	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.c #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00900000141555	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Japanese quail	MODERN SPECIES	25	ENSCJPG00005019326	ENSCJPG00005020435	CSRNP3 (ENSCJPG00005020436)	ACTR3 (ENSCJPG00005020443) #8	SLC35F5 (ENSCJPG00005020446) #9	GPR39 (ENSCJPG00005020449) #10	ENSCJPG00005020450	NCKAP5 (ENSCJPG00005020452) #12	MGAT5 (ENSCJPG00005020454) #13	TMEM163 (ENSCJPG00005020455) #15	ACMSD (ENSCJPG00005020456) #16	CCNT2 (ENSCJPG00005020457) #17	MAP3K19 (ENSCJPG00005020458) #18	RAB3GAP1 (ENSCJPG00005020459) #19	ZRANB3 (ENSCJPG00005020460) #21	R3HDM1 (ENSCJPG00005020461) #22	UBXN4 (ENSCJPG00005020464) #23	LCT (ENSCJPG00005020468) #24	MCM6 (ENSCJPG00005020470) #25	DARS1 (ENSCJPG00005020471) #26	CXCR4 (ENSCJPG00005020472) #27	THSD7B (ENSCJPG00005020474) #30	ENSCJPG00005020476 #31	HNMT (ENSCJPG00005020477) #31	SPOPL (ENSCJPG00005020479)	NXPH2 (ENSCJPG00005020480) #34	ENSCJPG00005020482	ENSCJPG00005020483	ENSCJPG00005020487	LRP1B (ENSCJPG00005020489) #37	ENSCJPG00005020490
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00390000011294	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.c #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Chicken	MODERN SPECIES	36	CCDC93 (ENSGALG00010020963)	DDX18 (ENSGALG00010021138)	DPP10 (ENSGALG00010021532) #7	ACTR3 (ENSGALG00010019319) #8	SLC35F5 (ENSGALG00010019398) #9	GPR39 (ENSGALG00010019416) #10	LYPD1 (ENSGALG00010019423) #11	NCKAP5 (ENSGALG00010019443) #12	MGAT5 (ENSGALG00010019461) #13	TMEM163 (ENSGALG00010019474) #15	ACMSD (ENSGALG00010019550) #16	CCNT2 (ENSGALG00010019587) #17	MAP3K19 (ENSGALG00010019600) #18	RAB3GAP1 (ENSGALG00010019643) #19	ZRANB3 (ENSGALG00010019717) #21	R3HDM1 (ENSGALG00010019786) #22	UBXN4 (ENSGALG00010019811) #23	LCT (ENSGALG00010019823) #24	MCM6 (ENSGALG00010019843) #25	DARS (ENSGALG00010009094) #26	CXCR4 (ENSGALG00010009099) #27	THSD7B (ENSGALG00010009106) #30	ENSGALG00010009112 #31	HNMT (ENSGALG00010009147) #31	SPOPL (ENSGALG00010009172)	NXPH2 (ENSGALG00010009212) #34	ENSGALG00010009224	ENSGALG00010009257	ENSGALG00010011353 #37	ENSGALG00010009269 #37	KYNU (ENSGALG00010009338)
Turkey	MODERN SPECIES	27	ENSMGAG00000022989 #37	ENSMGAG00000020828 #37	ENSMGAG00000018144	ENSMGAG00000017911	ENSMGAG00000012558	ENSMGAG00000012543	ENSMGAG00000012549 #34	ENSMGAG00000019800 #31	HNMT (ENSMGAG00000012535) #31	ENSMGAG00000015970 #27	DARS1 (ENSMGAG00000012501) #26	ENSMGAG00000022461	ENSMGAG00000012483 #23	ENSMGAG00000012487 #24	MCM6 (ENSMGAG00000020436) #25	R3HDM1 (ENSMGAG00000012461) #22	ENSMGAG00000018705 #21	ENSMGAG00000022859	ENSMGAG00000012437 #17	ENSMGAG00000015963 #18	RAB3GAP1 (ENSMGAG00000012443) #19	ENSMGAG00000012454	ACMSD (ENSMGAG00000012432) #16	ENSMGAG00000022328 #15	ENSMGAG00000012420 #13	ENSMGAG00000012429 #15	NCKAP5 (ENSMGAG00000012414) #12	ENSMGAG00000018410	ENSMGAG00000021759 #10	ENSMGAG00000012403 #11	ENSMGAG00000015953 #10
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Great tit	MODERN SPECIES	27	ACTR3 (ENSPMJG00000019931) #8	ENSPMJG00000019932	SLC35F5 (ENSPMJG00000019933) #9	GPR39 (ENSPMJG00000019934) #10	ENSPMJG00000019935	LYPD1 (ENSPMJG00000019936) #11	NCKAP5 (ENSPMJG00000019937) #12	MGAT5 (ENSPMJG00000019938) #13	TMEM163 (ENSPMJG00000019939) #15	ACMSD (ENSPMJG00000019940) #16	CCNT2 (ENSPMJG00000019941) #17	ENSPMJG00000019942 #18	ENSPMJG00000019943	RAB3GAP1 (ENSPMJG00000019945) #19	ENSPMJG00000019946	R3HDM1 (ENSPMJG00000019947) #22	UBXN4 (ENSPMJG00000019949) #23	LCT (ENSPMJG00000019950) #24	MCM6 (ENSPMJG00000019951) #25	DARS1 (ENSPMJG00000019952) #26	CXCR4 (ENSPMJG00000019953) #27	THSD7B (ENSPMJG00000019954) #30	ENSPMJG00000019955 #31	HNMT (ENSPMJG00000019956) #31	SPOPL (ENSPMJG00000019959)	NXPH2 (ENSPMJG00000019960) #34	ENSPMJG00000019963	ENSPMJG00000019964	LRP1B (ENSPMJG00000019966) #37	ENSPMJG00000019968	KYNU (ENSPMJG00000019969)
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324.ab.b #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Flycatcher	MODERN SPECIES	26	DDX18 (ENSFALG00000013672)	DPP10 (ENSFALG00000013689) #7	ACTR3 (ENSFALG00000013704) #8	SLC35F5 (ENSFALG00000013716) #9	GPR39 (ENSFALG00000024975) #10	ENSFALG00000024409	LYPD1 (ENSFALG00000013717) #11	NCKAP5 (ENSFALG00000026028) #12	MGAT5 (ENSFALG00000013722) #13	TMEM163 (ENSFALG00000013723) #15	ACMSD (ENSFALG00000013724) #16	CCNT2 (ENSFALG00000013725) #17	MAP3K19 (ENSFALG00000013726) #18	RAB3GAP1 (ENSFALG00000013727) #19	ENSFALG00000013728	R3HDM1 (ENSFALG00000013731) #22	UBXN4 (ENSFALG00000013733) #23	LCT (ENSFALG00000013735) #24	MCM6 (ENSFALG00000013743) #25	DARS1 (ENSFALG00000013752) #26	CXCR4 (ENSFALG00000013763) #27	THSD7B (ENSFALG00000013768) #30	ENSFALG00000013777 #31	HNMT (ENSFALG00000013782) #31	SPOPL (ENSFALG00000025445)	NXPH2 (ENSFALG00000014098) #34	ENSFALG00000026459	ENSFALG00000025359	ENSFALG00000027337	LRP1B (ENSFALG00000013809) #37	ENSFALG00000027773
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00940000171141	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324.ab.b #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324.ab.b #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Zebra finch	MODERN SPECIES	29	DDX18 (ENSTGUG00000011611)	DPP10 (ENSTGUG00000011635) #7	ACTR3 (ENSTGUG00000011659) #8	SLC35F5 (ENSTGUG00000011670) #9	GPR39 (ENSTGUG00000011677) #10	ENSTGUG00000026176	LYPD1 (ENSTGUG00000029108) #11	NCKAP5 (ENSTGUG00000011682) #12	MGAT5 (ENSTGUG00000011688) #13	TMEM163 (ENSTGUG00000011703) #15	ACMSD (ENSTGUG00000011711) #16	CCNT2 (ENSTGUG00000011715) #17	MAP3K19 (ENSTGUG00000029229) #18	RAB3GAP1 (ENSTGUG00000011724) #19	ENSTGUG00000011743	R3HDM1 (ENSTGUG00000011750) #22	UBXN4 (ENSTGUG00000011772) #23	ENSTGUG00000025578 #24	ENSTGUG00000011780 #24	ENSTGUG00000019584 #24	MCM6 (ENSTGUG00000011790) #25	DARS1 (ENSTGUG00000011810) #26	CXCR4 (ENSTGUG00000011822) #27	THSD7B (ENSTGUG00000011824) #30	ENSTGUG00000011829 #31	HNMT (ENSTGUG00000011836) #31	SPOPL (ENSTGUG00000011840)	NXPH2 (ENSTGUG00000011842) #34	ENSTGUG00000011843	ENSTGUG00000019269	LRP1B (ENSTGUG00000011849) #37
Common canary	MODERN SPECIES	8	DDX18 (ENSSCAG00000010971)	DPP10 (ENSSCAG00000010815) #7	ACTR3 (ENSSCAG00000010749) #8	SLC35F5 (ENSSCAG00000010739) #9	GPR39 (ENSSCAG00000010738) #10	ENSSCAG00000010704	LYPD1 (ENSSCAG00000010679) #11	NCKAP5 (ENSSCAG00000010674) #12	MGAT5 (ENSSCAG00000010656) #13	TMEM163 (ENSSCAG00000010647) #15	ACMSD (ENSSCAG00000010635) #16	CCNT2 (ENSSCAG00000010609) #17	ENSSCAG00000010603 #18	RAB3GAP1 (ENSSCAG00000010593) #19	ZRANB3 (ENSSCAG00000010440) #21	R3HDM1 (ENSSCAG00000010246) #22	UBXN4 (ENSSCAG00000010209) #23	LCT (ENSSCAG00000010173) #24	MCM6 (ENSSCAG00000010162) #25	DARS1 (ENSSCAG00000010155) #26	CXCR4 (ENSSCAG00000010153) #27	THSD7B (ENSSCAG00000010047) #30	ENSSCAG00000010011 #31	HNMT (ENSSCAG00000010007) #31	SPOPL (ENSSCAG00000010004)	NXPH2 (ENSSCAG00000009997) #34	ENSSCAG00000009989	ENSSCAG00000009974	LRP1B (ENSSCAG00000008544) #37	KYNU (ENSSCAG00000008360)	ARHGAP15 (ENSSCAG00000008352)
Medium ground finch	MODERN SPECIES	1	ACTR3 (ENSGFOG00000004640) #8	SLC35F5 (ENSGFOG00000004612) #9	ENSGFOG00000004597	GPR39 (ENSGFOG00000004584) #10	LYPD1 (ENSGFOG00000004572) #11	NCKAP5 (ENSGFOG00000004514) #12	MGAT5 (ENSGFOG00000004477) #13	TMEM163 (ENSGFOG00000004462) #15	ACMSD (ENSGFOG00000004449) #16	CCNT2 (ENSGFOG00000004444) #17	ENSGFOG00000004427 #18	ENSGFOG00000004421	RAB3GAP1 (ENSGFOG00000003907) #19	ZRANB3 (ENSGFOG00000003813) #21	ENSGFOG00000003801	ENSGFOG00000003789 #22	UBXN4 (ENSGFOG00000003676) #23	LCT (ENSGFOG00000003565) #24	MCM6 (ENSGFOG00000002438) #25	DARS1 (ENSGFOG00000002321) #26	CXCR4 (ENSGFOG00000002308) #27	THSD7B (ENSGFOG00000002128) #30	ENSGFOG00000002088 #31	HNMT (ENSGFOG00000002079) #31	SPOPL (ENSGFOG00000002067)	NXPH2 (ENSGFOG00000002058) #34	ENSGFOG00000002046	LRP1B (ENSGFOG00000000311) #37	KYNU (ENSGFOG00000000105)	ARHGAP15 (ENSGFOG00000000095)	GTDC1 (ENSGFOG00000000024)
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000160835	ENSGT00960000189410	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033
Kakapo	MODERN SPECIES	22	ENSSHBG00005001662	DDX18 (ENSSHBG00005001606)	DPP10 (ENSSHBG00005001557) #7	ACTR3 (ENSSHBG00005000466) #8	SLC35F5 (ENSSHBG00005019817) #9	GPR39 (ENSSHBG00005019810) #10	LYPD1 (ENSSHBG00005019808) #11	NCKAP5 (ENSSHBG00005019804) #12	MGAT5 (ENSSHBG00005019800) #13	TMEM163 (ENSSHBG00005019795) #15	ACMSD (ENSSHBG00005019791) #16	CCNT2 (ENSSHBG00005019788) #17	MAP3K19 (ENSSHBG00005019784) #18	RAB3GAP1 (ENSSHBG00005019778) #19	ZRANB3 (ENSSHBG00005019763) #21	R3HDM1 (ENSSHBG00005019728) #22	UBXN4 (ENSSHBG00005019707) #23	LCT (ENSSHBG00005019692) #24	MCM6 (ENSSHBG00005019682) #25	DARS1 (ENSSHBG00005019676) #26	CXCR4 (ENSSHBG00005019670) #27	ENSSHBG00005019669	THSD7B (ENSSHBG00005019648) #30	ENSSHBG00005019637 #31	ENSSHBG00005019634 #31	ENSSHBG00005019633 #31	SPOPL (ENSSHBG00005019629)	NXPH2 (ENSSHBG00005019625) #34	ENSSHBG00005019621	ENSSHBG00005019617	ENSSHBG00005019612
Golden eagle	MODERN SPECIES	22	ENSACCG00020000871	DDX18 (ENSACCG00020000935)	DPP10 (ENSACCG00020000986) #7	ACTR3 (ENSACCG00020001018) #8	SLC35F5 (ENSACCG00020001037) #9	GPR39 (ENSACCG00020001056) #10	LYPD1 (ENSACCG00020001065) #11	NCKAP5 (ENSACCG00020001085) #12	MGAT5 (ENSACCG00020001112) #13	TMEM163 (ENSACCG00020001133) #15	ACMSD (ENSACCG00020001156) #16	CCNT2 (ENSACCG00020001189) #17	ENSACCG00020001223 #18	RAB3GAP1 (ENSACCG00020001450) #19	ZRANB3 (ENSACCG00020001664) #21	R3HDM1 (ENSACCG00020001737) #22	UBXN4 (ENSACCG00020001859) #23	LCT (ENSACCG00020001924) #24	MCM6 (ENSACCG00020002049) #25	DARS1 (ENSACCG00020002123) #26	CXCR4 (ENSACCG00020002142) #27	THSD7B (ENSACCG00020002181) #30	ENSACCG00020002205 #31	HNMT (ENSACCG00020002230) #31	SPOPL (ENSACCG00020002242)	NXPH2 (ENSACCG00020002266) #34	ENSACCG00020002285	ENSACCG00020002307	ENSACCG00020002322	LRP1B (ENSACCG00020003781) #37	KYNU (ENSACCG00020004543)
African ostrich	MODERN SPECIES	695									MGAT5 (ENSSCUG00000014532) #13	TMEM163 (ENSSCUG00000014531) #15	ACMSD (ENSSCUG00000014527) #16	CCNT2 (ENSSCUG00000014522) #17	MAP3K19 (ENSSCUG00000014515) #18	RAB3GAP1 (ENSSCUG00000014387) #19	ZRANB3 (ENSSCUG00000014344) #21	R3HDM1 (ENSSCUG00000014332) #22	UBXN4 (ENSSCUG00000014319) #23	LCT (ENSSCUG00000014317) #24	MCM6 (ENSSCUG00000014301) #25	DARS1 (ENSSCUG00000014287) #26	CXCR4 (ENSSCUG00000014286) #27	THSD7B (ENSSCUG00000014244) #30	ENSSCUG00000014208 #31	HNMT (ENSSCUG00000014206) #31	SPOPL (ENSSCUG00000014202)	NXPH2 (ENSSCUG00000014198) #34	ENSSCUG00000014175	LRP1B (ENSSCUG00000014116) #37	ENSSCUG00000014086	KYNU (ENSSCUG00000014075)	ARHGAP15 (ENSSCUG00000014071)
Australian saltwater crocodile	MODERN SPECIES	66	DPP10 (ENSCPRG00005003460) #7	ACTR3 (ENSCPRG00005003555) #8	SLC35F5 (ENSCPRG00005003643) #9	GPR39 (ENSCPRG00005003646) #10	ENSCPRG00005003650	NCKAP5 (ENSCPRG00005003668) #12	ENSCPRG00005003730	MGAT5 (ENSCPRG00005003744) #13	TMEM163 (ENSCPRG00005003777) #15	ACMSD (ENSCPRG00005003785) #16	ENSCPRG00005003790 #17	CCNT2 (ENSCPRG00005003794) #17	ENSCPRG00005003797 #18	RAB3GAP1 (ENSCPRG00005003872) #19	ZRANB3 (ENSCPRG00005004364) #21	R3HDM1 (ENSCPRG00005004542) #22	ENSCPRG00005004804	ENSCPRG00005004844 #24	ENSCPRG00005004863 #24	ENSCPRG00005004869 #24	MCM6 (ENSCPRG00005004875) #25	DARS1 (ENSCPRG00005004894) #26	CXCR4 (ENSCPRG00005004904) #27	THSD7B (ENSCPRG00005004920) #30	ENSCPRG00005004946	ENSCPRG00005004950 #31	HNMT (ENSCPRG00005004963) #31	ENSCPRG00005004971	SPOPL (ENSCPRG00005004973)	NXPH2 (ENSCPRG00005004987) #34	ENSCPRG00005005002
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Emydidae	ANCESTRAL SPECIES	4	ENSGT00680000100037	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000156457	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033
painted turtle	MODERN SPECIES	13	RPS6KB2 (ENSCPBG00000009351)	PTPRCAP (ENSCPBG00000009352)	CORO1B (ENSCPBG00000009361)	ENSCPBG00000009482	CABP4 (ENSCPBG00000009488)	ENSCPBG00000009492	ACY3 (ENSCPBG00000009496)	ENSCPBG00000009500	OSBP (ENSCPBG00000009513)	STX3 (ENSCPBG00000009554)	ENSCPBG00000009572	MRPL16 (ENSCPBG00000009578)	CBLIF (ENSCPBG00000009582)	TCN1 (ENSCPBG00000009594)	MS4A12 (ENSCPBG00000009604)	R3HDM1 (ENSCPBG00000009645) #22	ENSCPBG00000010073	UBXN4 (ENSCPBG00000010085) #23	LCT (ENSCPBG00000010124) #24	MCM6 (ENSCPBG00000010128) #25	DARS1 (ENSCPBG00000010133) #26	CXCR4 (ENSCPBG00000010145) #27	THSD7B (ENSCPBG00000010150) #30	ACTR3 (ENSCPBG00000010170) #8	ENSCPBG00000010175	SLC35F5 (ENSCPBG00000010179) #9	GPR39 (ENSCPBG00000010183) #10	ENSCPBG00000010185	LYPD1 (ENSCPBG00000010186) #11	NCKAP5 (ENSCPBG00000010195) #12	MGAT5 (ENSCPBG00000010211) #13
Three-toed box turtle	MODERN SPECIES	25	DDX18 (ENSTMTG00000013762)	DPP10 (ENSTMTG00000013893) #7	ACTR3 (ENSTMTG00000014008) #8	SLC35F5 (ENSTMTG00000014043) #9	GPR39 (ENSTMTG00000014070) #10	ENSTMTG00000014075	LYPD1 (ENSTMTG00000014084) #11	NCKAP5 (ENSTMTG00000014099) #12	MGAT5 (ENSTMTG00000014128) #13	TMEM163 (ENSTMTG00000014144) #15	ACMSD (ENSTMTG00000014161) #16	CCNT2 (ENSTMTG00000014231) #17	MAP3K19 (ENSTMTG00000014649) #18	RAB3GAP1 (ENSTMTG00000014691) #19	ZRANB3 (ENSTMTG00000014762) #21	R3HDM1 (ENSTMTG00000014805) #22	ENSTMTG00000014877	ENSTMTG00000014891 #24	ENSTMTG00000014903 #24	ENSTMTG00000014910	MCM6 (ENSTMTG00000014960) #25	DARS1 (ENSTMTG00000012624) #26	CXCR4 (ENSTMTG00000012638) #27	THSD7B (ENSTMTG00000012697) #30	HNMT (ENSTMTG00000013096) #31	SPOPL (ENSTMTG00000013108)	NXPH2 (ENSTMTG00000013135) #34	ENSTMTG00000013143	ENSTMTG00000013165	LRP1B (ENSTMTG00000013281) #37	KYNU (ENSTMTG00000013497)
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT01030000235139	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00950000185980	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Abingdon island giant tortoise	MODERN SPECIES	70							MGAT5 (ENSCABG00000014607) #13	ENSCABG00000014604	TMEM163 (ENSCABG00000014601) #15	ACMSD (ENSCABG00000014598) #16	ENSCABG00000014594 #17	ENSCABG00000014592 #18	RAB3GAP1 (ENSCABG00000013728) #19	ENSCABG00000013727	ZRANB3 (ENSCABG00000013725) #21	R3HDM1 (ENSCABG00000013713) #22	ENSCABG00000013684	ENSCABG00000013676 #24	ENSCABG00000013674	MCM6 (ENSCABG00000013672) #25	DARS1 (ENSCABG00000013616) #26	CXCR4 (ENSCABG00000013608) #27
Goode s thornscrub tortoise	MODERN SPECIES	2	DPP10 (ENSGEVG00005021153) #7	ACTR3 (ENSGEVG00005021138) #8	SLC35F5 (ENSGEVG00005021132) #9	GPR39 (ENSGEVG00005021128) #10	LYPD1 (ENSGEVG00005021126) #11	NCKAP5 (ENSGEVG00005021121) #12	MGAT5 (ENSGEVG00005021116) #13	ENSGEVG00005021113	TMEM163 (ENSGEVG00005021110) #15	ACMSD (ENSGEVG00005021106) #16	ENSGEVG00005021102 #17	ENSGEVG00005021097 #17	ENSGEVG00005021095 #18	RAB3GAP1 (ENSGEVG00005021086) #19	ZRANB3 (ENSGEVG00005021082) #21	R3HDM1 (ENSGEVG00005021076) #22	UBXN4 (ENSGEVG00005021073) #23	ENSGEVG00005021070 #24	ENSGEVG00005021069	ENSGEVG00005021068	MCM6 (ENSGEVG00005021067) #25	DARS1 (ENSGEVG00005021065) #26	CXCR4 (ENSGEVG00005021063) #27	THSD7B (ENSGEVG00005021056) #30	HNMT (ENSGEVG00005021050) #31	SPOPL (ENSGEVG00005021047)	NXPH2 (ENSGEVG00005021046) #34	ENSGEVG00005021042	ENSGEVG00005021039	ENSGEVG00005021033	LRP1B (ENSGEVG00005021016) #37
Chinese turtle	MODERN SPECIES	624									MGAT5 (ENSPSIG00000010325) #13	ACMSD (ENSPSIG00000008832) #16	TMEM163 (ENSPSIG00000008394) #15	CCNT2 (ENSPSIG00000008314) #17	MAP3K19 (ENSPSIG00000008213) #18	RAB3GAP1 (ENSPSIG00000005549) #19	ZRANB3 (ENSPSIG00000005377) #21	R3HDM1 (ENSPSIG00000012915) #22	ENSPSIG00000011484	LCT (ENSPSIG00000010785) #24	MCM6 (ENSPSIG00000009764) #25	DARS1 (ENSPSIG00000008849) #26	CXCR4 (ENSPSIG00000008843) #27	THSD7B (ENSPSIG00000007975) #30	HNMT (ENSPSIG00000007919) #31	ENSPSIG00000007862	SPOPL (ENSPSIG00000007666)	NXPH2 (ENSPSIG00000007660) #34	LRP1B (ENSPSIG00000005843) #37	SLC32A1 (ENSPSIG00000005824)	ARHGAP40 (ENSPSIG00000005793)	ACTR5 (ENSPSIG00000005668)	ENSPSIG00000000675
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00900000142862	ENSGT00390000008033
Episquamata	ANCESTRAL SPECIES		ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT01030000235139	ENSGT01100000263518.A.a.b.f #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00940000181338
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT01100000263518.A.a.b.f #10	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000166779	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b
Common wall lizard	MODERN SPECIES		ACTR3 (ENSPMRG00000006645) #8	ENSPMRG00000006655	SLC35F5 (ENSPMRG00000006661) #9	GPR39 (ENSPMRG00000006679) #10	LYPD1 (ENSPMRG00000006685) #11	NCKAP5 (ENSPMRG00000006694) #12	MGAT5 (ENSPMRG00000006713) #13	TMEM163 (ENSPMRG00000006721) #15	ENSPMRG00000006724	ENSPMRG00000006728	ACMSD (ENSPMRG00000006733) #16	CCNT2 (ENSPMRG00000006745) #17	MAP3K19 (ENSPMRG00000006759) #18	RAB3GAP1 (ENSPMRG00000006767) #19	ZRANB3 (ENSPMRG00000006784) #21	R3HDM1 (ENSPMRG00000006817) #22	UBXN4 (ENSPMRG00000006851) #23	LCT (ENSPMRG00000006858) #24	MCM6 (ENSPMRG00000006870) #25	DARS1 (ENSPMRG00000006884) #26	CXCR4 (ENSPMRG00000006895) #27	THSD7B (ENSPMRG00000006906) #30	ENSPMRG00000006948 #31	HNMT (ENSPMRG00000006961) #31	ENSPMRG00000006970	SPOPL (ENSPMRG00000006977)	ENSPMRG00000006988	ENSPMRG00000007042	LRP1B (ENSPMRG00000007211) #37	ENSPMRG00000007298	ENSPMRG00000007325
Argentine black and white tegu	MODERN SPECIES	27	ENSSMRG00000014403 #10	LYPD1 (ENSSMRG00000014404) #11	ENSSMRG00000014405	ENSSMRG00000014406 #10	NCKAP5 (ENSSMRG00000014407) #12	MGAT5 (ENSSMRG00000014410) #13	TMEM163 (ENSSMRG00000014412) #15	ENSSMRG00000014413	ACMSD (ENSSMRG00000014414) #16	CCNT2 (ENSSMRG00000014415) #17	ENSSMRG00000014417 #18	ENSSMRG00000014418	ENSSMRG00000014419	RAB3GAP1 (ENSSMRG00000014420) #19	ZRANB3 (ENSSMRG00000014421) #21	R3HDM1 (ENSSMRG00000014448) #22	ENSSMRG00000014459	ENSSMRG00000014461 #24	ENSSMRG00000014462 #24	ENSSMRG00000014463	MCM6 (ENSSMRG00000014465) #25	DARS1 (ENSSMRG00000014466) #26	CXCR4 (ENSSMRG00000014468) #27
Toxicofera	ANCESTRAL SPECIES	10	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT01030000235139	ENSGT01100000263518.A.a.b.f #10	ENSGT00390000002215 #11	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000156457	ENSGT00940000160205 #23	ENSGT00940000155324 #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000160835	ENSGT00940000166779	ENSGT00940000157521.b #37
Elapidae	ANCESTRAL SPECIES		ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759.r.b #17	ENSGT00940000155759.r.a #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000156457	ENSGT00940000155324.w #24	ENSGT00940000155324.x #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000160835	ENSGT00940000166779	ENSGT00940000157521.b #37
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000154657.D #7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759.r.a #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000156457	ENSGT00940000155324.w #24	ENSGT00940000155324.x #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000160835	ENSGT00940000166779	ENSGT00940000157521.b #37
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000155065 #8	ENSGT00390000005949 #9	ENSGT01100000263518.A.a.b.e #10	ENSGT00390000002215 #11	ENSGT01030000235139	ENSGT00530000063607.b #12	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759.r.b #17	ENSGT00940000155759.r.a #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000156457	ENSGT00940000155324.w #24	ENSGT00940000155324.x #24	ENSGT00940000166747	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000166136	ENSGT00940000160835	ENSGT00940000166779	ENSGT00940000157521.b #37
Eastern brown snake	MODERN SPECIES	71	DPP10 (ENSPTXG00000011596) #7	ENSPTXG00000011597	ACTR3 (ENSPTXG00000011598) #8	SLC35F5 (ENSPTXG00000011599) #9	GPR39 (ENSPTXG00000011600) #10	LYPD1 (ENSPTXG00000011601) #11	ENSPTXG00000011602	NCKAP5 (ENSPTXG00000011606) #12	MGAT5 (ENSPTXG00000011804) #13	TMEM163 (ENSPTXG00000011806) #15	ACMSD (ENSPTXG00000011807) #16	CCNT2 (ENSPTXG00000011808) #17	ENSPTXG00000011809 #18	RAB3GAP1 (ENSPTXG00000011810) #19	ZRANB3 (ENSPTXG00000011811) #21	R3HDM1 (ENSPTXG00000011817) #22	ENSPTXG00000011823	ENSPTXG00000011824 #24	ENSPTXG00000011826 #24	ENSPTXG00000011828	MCM6 (ENSPTXG00000011838) #25	DARS1 (ENSPTXG00000012651) #26	CXCR4 (ENSPTXG00000012653) #27	ENSPTXG00000012655	THSD7B (ENSPTXG00000012661) #30
Mainland tiger snake	MODERN SPECIES	12	ENSNSUG00000009134	ACTR3 (ENSNSUG00000009133) #8	SLC35F5 (ENSNSUG00000009131) #9	GPR39 (ENSNSUG00000009130) #10	LYPD1 (ENSNSUG00000009129) #11	NCKAP5 (ENSNSUG00000009074) #12	MGAT5 (ENSNSUG00000009071) #13	TMEM163 (ENSNSUG00000009070) #15	ACMSD (ENSNSUG00000009068) #16	ENSNSUG00000009067 #17	ENSNSUG00000009066 #17	ENSNSUG00000009065 #18	RAB3GAP1 (ENSNSUG00000007864) #19	ENSNSUG00000007862	ZRANB3 (ENSNSUG00000007861) #21	R3HDM1 (ENSNSUG00000007707) #22	ENSNSUG00000007705	ENSNSUG00000007703 #24	ENSNSUG00000007691	MCM6 (ENSNSUG00000007686) #25	DARS1 (ENSNSUG00000007682) #26	CXCR4 (ENSNSUG00000007680) #27
Blue-lipped sea krait	MODERN SPECIES	388																R3HDM1 (ENSLLTG00000015649) #22	ENSLLTG00000015631	ENSLLTG00000015625 #24	ENSLLTG00000015619 #24	ENSLLTG00000015613
Indian cobra	MODERN SPECIES		SLC35F5 (ENSNNAG00000015460) #9	GPR39 (ENSNNAG00000015448) #10	LYPD1 (ENSNNAG00000015440) #11	ENSNNAG00000015404 #12	ENSNNAG00000015394	MGAT5 (ENSNNAG00000015375) #13	TMEM163 (ENSNNAG00000015249) #15	ENSNNAG00000015219 #16	ENSNNAG00000015191 #16	ENSNNAG00000015163 #17	ENSNNAG00000015156 #17	ENSNNAG00000015126 #17	ENSNNAG00000015109 #18	RAB3GAP1 (ENSNNAG00000015078) #19	ENSNNAG00000014910	R3HDM1 (ENSNNAG00000014546) #22	ENSNNAG00000014502	LCT (ENSNNAG00000014367) #24	MCM6 (ENSNNAG00000014241) #25	DARS1 (ENSNNAG00000014185) #26	CXCR4 (ENSNNAG00000014170) #27	THSD7B (ENSNNAG00000013843) #30	HNMT (ENSNNAG00000013815) #31	SPOPL (ENSNNAG00000013754)	NXPH2 (ENSNNAG00000013743) #34	ENSNNAG00000013733	ENSNNAG00000013673	LRP1B (ENSNNAG00000013416) #37	KYNU (ENSNNAG00000013382)	ENSNNAG00000013365	ARHGAP15 (ENSNNAG00000013349)
Lizard	MODERN SPECIES		ABCB6 (ENSACAG00000013017)	ENSACAG00000042330	ZFAND2B (ENSACAG00000012986)	ENSACAG00000012954	ENSACAG00000012857	ENSACAG00000012838	ENSACAG00000012718	MGAT5 (ENSACAG00000002486) #13	TMEM163 (ENSACAG00000002453) #15	ACMSD (ENSACAG00000042959) #16	ENSACAG00000038786	CCNT2 (ENSACAG00000002335) #17	RAB3GAP1 (ENSACAG00000002073) #19	ZRANB3 (ENSACAG00000001934) #21	ENSACAG00000044390	R3HDM1 (ENSACAG00000001676) #22	ENSACAG00000042155	ENSACAG00000043236	UBXN4 (ENSACAG00000001575) #23	LCT (ENSACAG00000001426) #24	MCM6 (ENSACAG00000001072) #25	DARS1 (ENSACAG00000000804) #26	CXCR4 (ENSACAG00000000795) #27	ENSACAG00000039047	THSD7B (ENSACAG00000000545) #30	ENSACAG00000029670 #31	HNMT (ENSACAG00000037643) #31	SPOPL (ENSACAG00000000338)	NXPH2 (ENSACAG00000000334) #34	ENSACAG00000042491	ENSACAG00000003521
tuatara	MODERN SPECIES	205			DPP10 (ENSSPUG00000003624) #7	ACTR3 (ENSSPUG00000003651) #8	SLC35F5 (ENSSPUG00000003677) #9	ENSSPUG00000003692 #10	ENSSPUG00000003700 #10	LYPD1 (ENSSPUG00000003707) #11	ENSSPUG00000003736 #12	MGAT5 (ENSSPUG00000003754) #13	TMEM163 (ENSSPUG00000003811) #15	ACMSD (ENSSPUG00000003910) #16	ENSSPUG00000003933 #17	RAB3GAP1 (ENSSPUG00000003963) #19	ZRANB3 (ENSSPUG00000004049) #21	R3HDM1 (ENSSPUG00000004167) #22	UBXN4 (ENSSPUG00000004414) #23	LCT (ENSSPUG00000004436) #24	DARS1 (ENSSPUG00000004559) #26	CXCR4 (ENSSPUG00000004736) #27	RGS22 (ENSSPUG00000004767)	ENSSPUG00000004835	ENSSPUG00000004842	ENSSPUG00000004858	ENSSPUG00000004869	ENSSPUG00000004876	ENSSPUG00000004887
Anura	ANCESTRAL SPECIES	7	ENSGT00390000016940.c.b	ENSGT00940000156702.b	ENSGT00390000005935	ENSGT01090000260005.a.a.a.b.a.b	ENSGT00940000158471	ENSGT00940000159765	ENSGT00940000164909	ENSGT01030000234859	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000155324 #24	ENSGT01050000244824.D.b #25	ENSGT01030000234618.F #26	ENSGT01050000244848.C.a #27	ENSGT00940000159262 #30	ENSGT00390000002862 #31	ENSGT00940000155953	ENSGT00950000182883.b.a.a #34	ENSGT00940000157521.b #37	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631
Frog	MODERN SPECIES	9	stk11ip (ENSXETG00000007155)	slc4a3 (ENSXETG00000007160)	myo10.2 (ENSXETG00000007165)	ENSXETG00000034875	ENSXETG00000036649	mgat5 (ENSXETG00000000514) #13	tuba1l (ENSXETG00000044931)	tmem163 (ENSXETG00000048169) #15	acmsd (ENSXETG00000000504) #16	ccnt2 (ENSXETG00000000488) #17	ENSXETG00000043739 #18	map3k19 (ENSXETG00000035676) #18	rab3gap1 (ENSXETG00000000480) #19	ENSXETG00000042355	zranb3 (ENSXETG00000019336) #21	r3hdm1 (ENSXETG00000019330) #22	ubxn4 (ENSXETG00000024994) #23	lct.2 (ENSXETG00000019306) #24	mgc79670 (ENSXETG00000019297)	zfand2b (ENSXETG00000046183)	atg9a (ENSXETG00000019294)	ankzf1 (ENSXETG00000019293)	glb1 (ENSXETG00000019291)	stk16 (ENSXETG00000019290)	tuba4b (ENSXETG00000047851)	tuba1cl.2 (ENSXETG00000041886)	dnajb2 (ENSXETG00000019286)	ptprn (ENSXETG00000019283)	dnpep (ENSXETG00000019276)	des.1 (ENSXETG00000019275)	ENSXETG00000045217
Leishan spiny toad	MODERN SPECIES	10	SLC4A3 (ENSLLEG00000027309)	INHA (ENSLLEG00000027653)	ENSLLEG00000027675	ENSLLEG00000027697	ENSLLEG00000027727	ENSLLEG00000027958	ENSLLEG00000029562	MGAT5 (ENSLLEG00000029574) #13	TMEM163 (ENSLLEG00000029607) #15	ACMSD (ENSLLEG00000029662) #16	ENSLLEG00000029746	CCNT2 (ENSLLEG00000029756) #17	MAP3K19 (ENSLLEG00000029785) #18	RAB3GAP1 (ENSLLEG00000029859) #19	ZRANB3 (ENSLLEG00000030091) #21	R3HDM1 (ENSLLEG00000030345) #22	ENSLLEG00000030373	ENSLLEG00000030380	LCT (ENSLLEG00000030441) #24	MCM6 (ENSLLEG00000030626) #25	DARS1 (ENSLLEG00000005656) #26	CXCR4 (ENSLLEG00000005950) #27	ENSLLEG00000005969	ENSLLEG00000005977	ENSLLEG00000006025	THSD7B (ENSLLEG00000006069) #30	ENSLLEG00000006589	ENSLLEG00000006605	ENSLLEG00000006619	ENSLLEG00000006634 #31	ENSLLEG00000006667
Coelacanth	MODERN SPECIES	1510															ENSLACG00000003817	R3HDM1 (ENSLACG00000005334) #22	ENSLACG00000007983	UBXN4 (ENSLACG00000008040) #23	LCT (ENSLACG00000008371) #24	MCM6 (ENSLACG00000009292) #25	DARS1 (ENSLACG00000009996) #26	CXCR4 (ENSLACG00000011277) #27
Actinopterygii	ANCESTRAL SPECIES										ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000165390	ENSGT00530000063686.a.a	ENSGT00940000157541	ENSGT00390000015050	ENSGT00390000000220.B	ENSGT00390000000220.A	ENSGT00940000158539	ENSGT00940000158526	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233	ENSGT00950000183208.A.c.a	ENSGT00900000143214	ENSGT00390000006631
Reedfish	MODERN SPECIES	16	ESYT3 (ENSECRG00000006598)	ENSECRG00000006586	faimb (ENSECRG00000006576)	ENSECRG00000006528	parp14rs1 (ENSECRG00000006475)	ENSECRG00000006406	mgat5 (ENSECRG00000006366) #13	tmem163a (ENSECRG00000006356) #15	acmsd (ENSECRG00000006341) #16	ccnt2a (ENSECRG00000006331) #17	CCNT2 (ENSECRG00000006315) #17	ENSECRG00000006308 #18	rab3gap1 (ENSECRG00000010452) #19	ZRANB3 (ENSECRG00000010412) #21	ENSECRG00000010395	R3HDM1 (ENSECRG00000010368) #22	UBXN4 (ENSECRG00000010348) #23	ENSECRG00000010333	NMI (ENSECRG00000010319)	rnd3b (ENSECRG00000010309)	ENSECRG00000010302	mmadhca (ENSECRG00000010291)	lypd6 (ENSECRG00000010280)	lypd6b (ENSECRG00000010269)	KIF5C (ENSECRG00000010243)	epc2 (ENSECRG00000010226)	MBD5 (ENSECRG00000010210)	orc4 (ENSECRG00000010192)	acvr2aa (ENSECRG00000010157)	ENSECRG00000010123	zeb2b (ENSECRG00000010088)
Neopterygii	ANCESTRAL SPECIES	1	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000159094	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170 #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000165390	ENSGT00530000063686.a.a	ENSGT01100000263596	ENSGT00940000157541	ENSGT00390000015050	ENSGT00390000000220.B	ENSGT00390000000220.A	ENSGT00940000158539	ENSGT00940000158526	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233	ENSGT00950000183208.A.c.a	ENSGT00900000143214
Spotted gar	MODERN SPECIES	650	inhbb (ENSLOCG00000002019)	ralba (ENSLOCG00000002006)	ENSLOCG00000001998	epb41l5 (ENSLOCG00000001937)	ptpn4a (ENSLOCG00000001897)	tmem177 (ENSLOCG00000017826)	MRAS (ENSLOCG00000001886)	pth2ra (ENSLOCG00000001855)	mgat5 (ENSLOCG00000001826) #13	tmem163a (ENSLOCG00000001812) #15	acmsd (ENSLOCG00000001787) #16	ccnt2a (ENSLOCG00000001764) #17	ENSLOCG00000001750 #18	rab3gap1 (ENSLOCG00000001701) #19	ZRANB3 (ENSLOCG00000001673) #21	R3HDM1 (ENSLOCG00000001641) #22	UBXN4 (ENSLOCG00000001630) #23	ENSLOCG00000001612	NMI (ENSLOCG00000001598)	ENSLOCG00000001583	rnd3b (ENSLOCG00000001573)	mmadhca (ENSLOCG00000001561)	lypd6 (ENSLOCG00000001546)	lypd6b (ENSLOCG00000001536)	KIF5C (ENSLOCG00000001468)	epc2 (ENSLOCG00000001437)	MBD5 (ENSLOCG00000001417)	orc4 (ENSLOCG00000001369)	acvr2aa (ENSLOCG00000001336)	zeb2b (ENSLOCG00000001301)	gtdc1 (ENSLOCG00000001286)
Osteoglossocephalai	ANCESTRAL SPECIES	18	ENSGT00940000159213	ENSGT00940000159862.b	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000159094	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759 #17	ENSGT00940000160383 #18	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095 #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00530000063686.a.a	ENSGT00940000157541.f	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a	ENSGT00940000158526
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000156095.k #22
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	192					ENSPKIG00000005083	ENSPKIG00000005070	ENSPKIG00000004986	PTPN4 (ENSPKIG00000004861)	MRAS (ENSPKIG00000004834)	ENSPKIG00000004802	mgat5 (ENSPKIG00000004746) #13	TMEM163 (ENSPKIG00000004686) #15	CCNT2 (ENSPKIG00000004631) #17	ENSPKIG00000004594 #18	ENSPKIG00000004579	R3HDM1 (ENSPKIG00000004328) #22	ENSPKIG00000004064	rnd3a (ENSPKIG00000003968)	mmadhcb (ENSPKIG00000003948)	ENSPKIG00000003918	lypd6b (ENSPKIG00000003883)	KIF5C (ENSPKIG00000003824)	EPC2 (ENSPKIG00000003738)	ENSPKIG00000003700	MBD5 (ENSPKIG00000003673)	orc4 (ENSPKIG00000003619)	ACVR2A (ENSPKIG00000003523)	zeb2b (ENSPKIG00000003462)
P. kingsleyae	MODERN SPECIES	189									PTH2R (ENSPKIG00000011746)	mgat5 (ENSPKIG00000011670) #13	tmem163a (ENSPKIG00000011608) #15	acmsd (ENSPKIG00000011557) #16	CCNT2 (ENSPKIG00000011538) #17	rab3gap1 (ENSPKIG00000011382) #19	ZRANB3 (ENSPKIG00000011277) #21	R3HDM1 (ENSPKIG00000011224) #22	UBXN4 (ENSPKIG00000011187) #23	ENSPKIG00000011115	RANBP2 (ENSPKIG00000010971)	edar (ENSPKIG00000010858)	SH3RF3 (ENSPKIG00000010807)	septin10 (ENSPKIG00000010750)	sowahcb (ENSPKIG00000010696)	DHRSX (ENSPKIG00000010669)	cd99 (ENSPKIG00000010633)	MXRA5 (ENSPKIG00000010611)	PRKX (ENSPKIG00000010569)	ENSPKIG00000010544	pudp (ENSPKIG00000010520)
Asian bonytongue	MODERN SPECIES	3	iqcb1 (ENSSFOG00015020688)	tsn (ENSSFOG00015020668)	RALB (ENSSFOG00015020656)	inhbb (ENSSFOG00015032689)	GLI2 (ENSSFOG00015020575)	tfcp2l1 (ENSSFOG00015020550)	CLASP1 (ENSSFOG00015020434)	ENSSFOG00015020408	ENSSFOG00015020357	MRAS (ENSSFOG00015032537)	pth2ra (ENSSFOG00015020293)	mgat5 (ENSSFOG00015026297) #13	TMEM163 (ENSSFOG00015020195) #15	CCNT2 (ENSSFOG00015020175) #17	ENSSFOG00015020163 #18	ENSSFOG00015019851 #22	ENSSFOG00015030318	ENSSFOG00015019700	rnd3a (ENSSFOG00015028705)	mmadhcb (ENSSFOG00015019602)	ENSSFOG00015026236	lypd6b (ENSSFOG00015024714)	KIF5C (ENSSFOG00015019517)	EPC2 (ENSSFOG00015019449)	MBD5 (ENSSFOG00015019421)	orc4 (ENSSFOG00015019383)	ACVR2A (ENSSFOG00015026082)	zeb2b (ENSSFOG00015019297)	ENSSFOG00015019155 ##37	ENSSFOG00015019073	ENSSFOG00015030562
Osteoglossiformes	ANCESTRAL SPECIES	271	ENSGT00940000154817.b.b.b.n	ENSGT00940000159158	ENSGT00940000159213	ENSGT00940000159862.a	ENSGT00940000155984.h	ENSGT00940000156332	ENSGT00940000157211.n	ENSGT00940000156353	ENSGT00940000159094	ENSGT00940000153470.a.a.a.a.g #13	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.d #17	ENSGT00390000006705 #19	ENSGT00940000158559 #21	ENSGT00940000156095.l #22	ENSGT00940000160205 #23
Asian bonytongue	MODERN SPECIES	13	ENSSFOG00015013461	PPM1A (ENSSFOG00015013475)	six6b (ENSSFOG00015013501)	SIX1 (ENSSFOG00015013516)	ENSSFOG00015013530	ENSSFOG00015013552	SGPP1 (ENSSFOG00015013571)	ppp2r5eb (ENSSFOG00015013606)	ENSSFOG00015013698	mgat5 (ENSSFOG00015025621) #13	tmem163a (ENSSFOG00015013757) #15	acmsd (ENSSFOG00015013796) #16	CCNT2 (ENSSFOG00015013826) #17	rab3gap1 (ENSSFOG00015013870) #19	ZRANB3 (ENSSFOG00015014001) #21	R3HDM1 (ENSSFOG00015014134) #22	UBXN4 (ENSSFOG00015014378) #23	rnd3a (ENSSFOG00015030279)	mmadhca (ENSSFOG00015014453)	LYPD6 (ENSSFOG00015014472)	KIF5C (ENSSFOG00015014505)	epc2 (ENSSFOG00015014568)	MBD5 (ENSSFOG00015006495)	ACVR2A (ENSSFOG00015006516)	ENSSFOG00015028999	zeb2b (ENSSFOG00015006557)	ENSSFOG00015024415	gtdc1 (ENSSFOG00015006586)	arhgap15 (ENSSFOG00015006616)	KYNU (ENSSFOG00015006641)	LRP1B (ENSSFOG00015006789) ##37
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	110	ENSGT00390000005717.s	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000165301.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.b	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000158539.b	ENSGT00390000000220.B.c.a	ENSGT00940000157541.f	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a	ENSGT00940000158526	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Otomorpha	ANCESTRAL SPECIES	151	ENSGT00390000005717.s	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000165301.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.b	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000158539.b
Clupeiformes	ANCESTRAL SPECIES	46	ENSGT00390000005717.s	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000165301.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.b	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000158539.b
Denticle herring	MODERN SPECIES	15	ENSDCDG00000021149	ENSDCDG00000021147	clcn4 (ENSDCDG00000020414)	ENSDCDG00000020385	CLASP1 (ENSDCDG00000020053)	gli2b (ENSDCDG00000020021)	INHBB (ENSDCDG00000020001)	ralba (ENSDCDG00000019998)	ptpn4b (ENSDCDG00000019858)	MRAS (ENSDCDG00000019842)	PTH2R (ENSDCDG00000019292)	mgat5 (ENSDCDG00000019250) #13	TMEM163 (ENSDCDG00000019234) #15	ccnt2b (ENSDCDG00000019220) #17	ZRANB3 (ENSDCDG00000019219) #21	R3HDM1 (ENSDCDG00000017177) #22	rnd3a (ENSDCDG00000017137)	mmadhca (ENSDCDG00000017132)	lypd6 (ENSDCDG00000017131)	KIF5C (ENSDCDG00000017051)	txlng (ENSDCDG00000017024)	rbb4l (ENSDCDG00000016888)	ZRSR2 (ENSDCDG00000016878)	ap1s2 (ENSDCDG00000016872)	PHKA2 (ENSDCDG00000016423)	ppef1 (ENSDCDG00000016399)	ENSDCDG00000016387	cdkl5 (ENSDCDG00000016372)	SCML2 (ENSDCDG00000016363)	NHS (ENSDCDG00000016360)	ace2 (ENSDCDG00000016354)
Atlantic herring	MODERN SPECIES	13	clcn4 (ENSCHAG00000023965)	ENSCHAG00000024285	CLASP1 (ENSCHAG00000024328)	ENSCHAG00000025058	INHBB (ENSCHAG00000025084)	RALB (ENSCHAG00000025088)	ENSCHAG00000025093	ENSCHAG00000025098	ptpn4b (ENSCHAG00000025109)	PTH2R (ENSCHAG00000025146)	mgat5 (ENSCHAG00000025244) #13	ENSCHAG00000002437 #15	ccnt2b (ENSCHAG00000002533) #17	ENSCHAG00000002722 #21	GOLT1B (ENSCHAG00000004077)	ENSCHAG00000004095 #22	ENSCHAG00000004364	rnd3a (ENSCHAG00000004399)	mmadhca (ENSCHAG00000004464)	ENSCHAG00000004542	ENSCHAG00000004620	ENSCHAG00000004669	ENSCHAG00000004692	ENSCHAG00000004722	ENSCHAG00000004817	idh3b (ENSCHAG00000005618)	ptpra (ENSCHAG00000006627)	gnrh2 (ENSCHAG00000008228)	klf12a (ENSCHAG00000008249)	ENSCHAG00000008271	KLF5 (ENSCHAG00000008282)
Otophysi	ANCESTRAL SPECIES	121									ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00390000001225	ENSGT00390000005581.a	ENSGT00940000167649	ENSGT01050000244905.A.a	ENSGT00390000010463.a.b.c.a	ENSGT00390000006330.a.a.b	ENSGT00530000063599.B.g	ENSGT00940000155311.B
Characiphysae	ANCESTRAL SPECIES	27	ENSGT00940000158077	ENSGT00940000173933	ENSGT00950000182963.b.a.d	ENSGT00940000180452	ENSGT00940000159407.q	ENSGT00940000157355.c.i	ENSGT00940000161181.c	ENSGT00940000159830	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e
Channel catfish	MODERN SPECIES	19	ace2 (ENSIPUG00000014467)	NHS (ENSIPUG00000014350)	ENSIPUG00000014334	ENSIPUG00000014318	ENSIPUG00000014309	cdkl5 (ENSIPUG00000014275)	xlrs1 (ENSIPUG00000014227)	ppef1 (ENSIPUG00000014163)	ptpn4b (ENSIPUG00000014002)	mrasb (ENSIPUG00000013954)	PTH2R (ENSIPUG00000013939)	mgat5 (ENSIPUG00000013903) #13	TMEM163 (ENSIPUG00000013885) #15	ccnt2 (ENSIPUG00000013854) #17	ZRANB3 (ENSIPUG00000013812) #21	ENSIPUG00000013629 #22	rnd3a (ENSIPUG00000013558)	ENSIPUG00000013543	ENSIPUG00000013492	ENSIPUG00000013476	ENSIPUG00000013450	dnal4 (ENSIPUG00000013432)	nptxrb (ENSIPUG00000013419)	polr3f (ENSIPUG00000013347)	dzank1 (ENSIPUG00000013320)	CSRP2BP (ENSIPUG00000013190)	ENSIPUG00000013148	aars2 (ENSIPUG00000013115)	ENSIPUG00000013100	ENSIPUG00000013018	ENSIPUG00000012990
Characiphysae_b	ANCESTRAL SPECIES	149	ENSGT00940000158077	ENSGT00940000173933	ENSGT00950000182963.b.a.d	ENSGT00940000180452	ENSGT00940000159407.q	ENSGT00940000157355.c.i	ENSGT00940000161181.c	ENSGT00940000159830	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e
Characoidei	ANCESTRAL SPECIES	162	ENSGT00980000198991	ENSGT00940000158077	ENSGT00940000173933	ENSGT00950000182963.b.a.d	ENSGT00940000180452	ENSGT00940000159407.q	ENSGT00940000157355.c.i	ENSGT00940000159830	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT01010000222294.c.b.b.b.d.b.b.d	ENSGT01020000230359.A.v	ENSGT00940000156034.a
Red-bellied piranha	MODERN SPECIES	34	ace2 (ENSPNAG00000002815)	ENSPNAG00000013572	NHS (ENSPNAG00000013587)	ENSPNAG00000013593	SCML2 (ENSPNAG00000002846)	cdkl5 (ENSPNAG00000013640)	rs1a (ENSPNAG00000013654)	ppef1 (ENSPNAG00000013710)	ptpn4b (ENSPNAG00000013728)	MRAS (ENSPNAG00000013747)	PTH2R (ENSPNAG00000013770)	mgat5 (ENSPNAG00000013807) #13	TMEM163 (ENSPNAG00000013841) #15	ccnt2b (ENSPNAG00000013866) #17	ZRANB3 (ENSPNAG00000013880) #21	R3HDM1 (ENSPNAG00000013952) #22	ENSPNAG00000014021	rnd3a (ENSPNAG00000006462)	ENSPNAG00000014072	ENSPNAG00000014093	ENSPNAG00000014109	ENSPNAG00000014119	enpp1 (ENSPNAG00000003034)	ENSPNAG00000014153	ENSPNAG00000014159
Mexicana tetra	MODERN SPECIES	33	ENSAMXG00000008483	ace2 (ENSAMXG00000008462)	NHS (ENSAMXG00000008442)	SCML2 (ENSAMXG00000043377)	cdkl5 (ENSAMXG00000008390)	ENSAMXG00000036340	rs1a (ENSAMXG00000033915)	ppef1 (ENSAMXG00000008301)	ptpn4b (ENSAMXG00000003635)	MRAS (ENSAMXG00000010919)	PTH2R (ENSAMXG00000003599)	mgat5 (ENSAMXG00000003586) #13	TMEM163 (ENSAMXG00000003580) #15	ccnt2b (ENSAMXG00000032955) #17	ZRANB3 (ENSAMXG00000003555) #21	R3HDM1 (ENSAMXG00000003536) #22	rnd3a (ENSAMXG00000032297)	ENSAMXG00000003382	ENSAMXG00000042438	enpp1 (ENSAMXG00000034422)	ENSAMXG00000033960	ENSAMXG00000029929	aox5 (ENSAMXG00000029215)	bzw1a (ENSAMXG00000002926)	ENSAMXG00000029879	ENSAMXG00000002864	ENSAMXG00000035966	ENSAMXG00000038669	LRP1B (ENSAMXG00000040119) ##37	ENSAMXG00000038962	gtpbp1l (ENSAMXG00000013159)
Electric eel	MODERN SPECIES	264	yju2b (ENSEEEG00000024475)	ENSEEEG00000024477	ENSEEEG00000024478	pdgfaa (ENSEEEG00000024479)	RS1 (ENSEEEG00000024483)	ppef1 (ENSEEEG00000024484)	ptpn4b (ENSEEEG00000024486)	MRAS (ENSEEEG00000024489)	ENSEEEG00000024490	PTH2R (ENSEEEG00000024491)	mgat5 (ENSEEEG00000024492) #13	TMEM163 (ENSEEEG00000024494) #15	ENSEEEG00000024496	ccnt2b (ENSEEEG00000024498) #17	ZRANB3 (ENSEEEG00000000150) #21	ENSEEEG00000000314 #22	rnd3a (ENSEEEG00000000497)
Cyprinoidei	ANCESTRAL SPECIES	39	ENSGT00940000164753.b	ENSGT00550000075065.b	ENSGT00390000005372.f.e	ENSGT00940000163944	ENSGT00940000157249	ENSGT00940000160342.f	ENSGT00940000159655	ENSGT00950000182969.B.c.a.b	ENSGT00940000157211.k	ENSGT00940000156353.u.b	ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00390000001225	ENSGT00390000005581.a	ENSGT00940000167649	ENSGT01050000244905.A.a	ENSGT00390000010463.a.b.c.a	ENSGT00390000006330.a.a.b	ENSGT00530000063599.B.g	ENSGT00940000155311.B	ENSGT00940000154486.b.b.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	11	ENSGT00940000164753.b.i	ENSGT00550000075065.b.a	ENSGT00390000005372.f.e.a.a	ENSGT00940000163944.a	ENSGT00940000157249	ENSGT00940000160342.f.b	ENSGT00940000159655.f	ENSGT00950000182969.B.c.a.b.e	ENSGT00940000157211.k.a	ENSGT00940000156353.u.b.e	ENSGT00940000159094.e.b	ENSGT00940000153470.a.a.a.a.f #13	ENSGT00390000001170.a.b.c #15	ENSGT00940000155759.e.b.b #17	ENSGT00940000158559.c #21	ENSGT00940000156095.m.a.a #22	ENSGT00940000157541.e.x	ENSGT00390000015050.`b.b.a	ENSGT00390000009029	ENSGT00940000155992.c.b.h	ENSGT00390000015709.a	ENSGT00940000156180.e.b	ENSGT00390000001225.r	ENSGT00940000160342.f.a	ENSGT00940000159655.e	ENSGT00950000182969.B.c.a.b.f	ENSGT00940000157211.k.b	ENSGT00940000156353.u.b.f	ENSGT00940000159094.e.a	ENSGT00940000153470.a.a.a.a.e #13	ENSGT00390000001170.a.b.d #15
Goldfish	MODERN SPECIES	41	ENSCARG00000029602	mettl21a (ENSCARG00000029612)	ENSCARG00000029639	ENSCARG00000029653	crygs1 (ENSCARG00000029660)	KRT222 (ENSCARG00000029703)	ENSCARG00000029718	ptpn4b (ENSCARG00000029749)	MRAS (ENSCARG00000029875)	PTH2R (ENSCARG00000029891)	ENSCARG00000029970	mgat5 (ENSCARG00000030031) #13	TMEM163 (ENSCARG00000030198) #15	ccnt2b (ENSCARG00000030214) #17	ZRANB3 (ENSCARG00000030341) #21	R3HDM1 (ENSCARG00000031421) #22	rnd3a (ENSCARG00000031747)	mmadhca (ENSCARG00000031782)	cep70 (ENSCARG00000031810)	adarb1a (ENSCARG00000031891)	ENSCARG00000032255	cnot9 (ENSCARG00000034596)	ENSCARG00000034701	mstna (ENSCARG00000034715)	stat1a (ENSCARG00000034836)	glsa (ENSCARG00000039255)	mfsd6a (ENSCARG00000040194)	ahr1b (ENSCARG00000040222)	ENSCARG00000040333	ahr2 (ENSCARG00000040345)	ENSCARG00000040693
Cyprininae_a	ANCESTRAL SPECIES	144	ENSGT00940000164753.b.i	ENSGT00550000075065.b.a	ENSGT00390000005372.f.e.a.a	ENSGT00940000163944.a	ENSGT00940000157249	ENSGT00940000160342.f.b	ENSGT00940000159655.f	ENSGT00950000182969.B.c.a.b.e	ENSGT00940000157211.k.a	ENSGT00940000156353.u.b.e	ENSGT00940000159094.e.b	ENSGT00940000153470.a.a.a.a.f #13	ENSGT00390000001170.a.b.c #15	ENSGT00940000155759.e.b.b #17	ENSGT00940000158559.c #21	ENSGT00940000156095.m.a.a #22	ENSGT00940000157541.e.x	ENSGT00390000015050.`b.b.a	ENSGT00390000009029	ENSGT00940000155992.c.b.h	ENSGT00390000015709.a	ENSGT00940000156180.e.b	ENSGT00390000001225.r	ENSGT00390000005581.a	ENSGT00940000167649.f.a	ENSGT01050000244905.A.a.b	ENSGT00390000010463.a.b.c.a.a	ENSGT00390000006330.a.a.b.a	ENSGT00530000063599.B.g.d	ENSGT00940000155311.B.k	ENSGT00940000154486.b.b.b.f
Common carp reference	MODERN SPECIES	43	gcga (ENSCCRG00000046178)	dpp4 (ENSCCRG00000044681)	mettl21a (ENSCCRG00000054423)	ENSCCRG00000072918	ENSCCRG00000077214	crygs1 (ENSCCRG00000058988)	ENSCCRG00000046321	ptpn4b (ENSCCRG00000038493)	ENSCCRG00000038513	ENSCCRG00000022437	ENSCCRG00000020887	mgat5 (ENSCCRG00000077969) #13	ENSCCRG00000000810 #15	ccnt2b (ENSCCRG00000066766) #17	ENSCCRG00000000761 #21	ENSCCRG00000008994 #22	rnd3a (ENSCCRG00000043088)	mmadhca (ENSCCRG00000057539)	cep70 (ENSCCRG00000008917)	adarb1a (ENSCCRG00000020488)	slx9 (ENSCCRG00000052631)	ENSCCRG00000028054	cnot9 (ENSCCRG00000041798)	mstna (ENSCCRG00000035818)	stat1a (ENSCCRG00000035713)	glsa (ENSCCRG00000032031)	nab1a (ENSCCRG00000054360)	mfsd6a (ENSCCRG00000039447)	ENSCCRG00000073877	ahr1b (ENSCCRG00000005944)	ahr2 (ENSCCRG00000031831)
Golden-line barbel	MODERN SPECIES	162	sgsh (ENSSGRG00000036748)	slc26a11 (ENSSGRG00000036564)	npb (ENSSGRG00000036559)	gnav1 (ENSSGRG00000036556)	pcyt2 (ENSSGRG00000036415)	gcga (ENSSGRG00000036409)	dpp4 (ENSSGRG00000036406)	krt96 (ENSSGRG00000036403)	ptpn4b (ENSSGRG00000036272)	MRAS (ENSSGRG00000036267)	PTH2R (ENSSGRG00000036257)	mgat5 (ENSSGRG00000035883) #13	TMEM163 (ENSSGRG00000035880) #15	ccnt2b (ENSSGRG00000035740) #17	ENSSGRG00000035729 #21	R3HDM1 (ENSSGRG00000035518) #22
Cyprininae	ANCESTRAL SPECIES	11	ENSGT00390000009029	ENSGT00940000155992.c.b.h	ENSGT00390000015709.a	ENSGT00940000156180.e.b	ENSGT00390000001225.r	ENSGT00940000160342.f.a	ENSGT00940000159655.e	ENSGT00950000182969.B.c.a.b.f	ENSGT00940000157211.k.b	ENSGT00940000156353.u.b.f	ENSGT00940000159094.e.a	ENSGT00940000153470.a.a.a.a.e #13	ENSGT00390000001170.a.b.d #15	ENSGT00940000155759.e.b.a #17	ENSGT00940000158559.d #21	ENSGT00940000156095.m.a.b #22	ENSGT00940000157541.e.w	ENSGT00390000015050.`b.b.b	ENSGT00940000155992.c.b.g	ENSGT00390000015709.b	ENSGT00940000156180.e.a	ENSGT00390000001225.q	ENSGT00390000005581.a	ENSGT00940000167649.e	ENSGT00940000167649.f.b	ENSGT01050000244905.A.a.a	ENSGT00390000010463.a.b.c.a.b	ENSGT00390000006330.a.a.b.b	ENSGT00530000063599.B.g.c	ENSGT00940000167649.f.a	ENSGT01050000244905.A.a.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	14	ENSCARG00000009532	ENSCARG00000009562	ENSCARG00000009569	ENSCARG00000009581	ENSCARG00000009595	ENSCARG00000009601	ENSCARG00000009606	ENSCARG00000009613	ENSCARG00000009620	ENSCARG00000009640	ENSCARG00000027881	ENSCARG00000027890	ENSCARG00000027898	TMEM163 (ENSCARG00000027906) #15	ccnt2b (ENSCARG00000027929) #17	R3HDM1 (ENSCARG00000028063) #22	rnd3a (ENSCARG00000030471)	mmadhca (ENSCARG00000030491)	adarb1a (ENSCARG00000030514)	slx9 (ENSCARG00000030582)	ENSCARG00000030708	cnot9 (ENSCARG00000034144)	ftcd (ENSCARG00000034487)	mstna (ENSCARG00000035931)	stat1a (ENSCARG00000035963)	glsa (ENSCARG00000036617)	nab1a (ENSCARG00000040133)	mfsd6a (ENSCARG00000040144)	ENSCARG00000040156	ahr1b (ENSCARG00000040185)	ENSCARG00000040267
Goldfish	MODERN SPECIES	14	rpp21 (ENSCARG00000034060)	ENSCARG00000034053	ENSCARG00000034021	ENSCARG00000034007	ENSCARG00000034002	ENSCARG00000034000	ENSCARG00000033973	ccdc71 (ENSCARG00000033962)	stab1 (ENSCARG00000033393)	NISCH (ENSCARG00000032054)	ENSCARG00000031967	nol8 (ENSCARG00000031942)	sh3bp4a (ENSCARG00000031932)	s100b (ENSCARG00000031921)	ENSCARG00000029144	R3HDM1 (ENSCARG00000026895) #22	ENSCARG00000026790	rnd3a (ENSCARG00000026780)	mmadhca (ENSCARG00000026773)	adarb1a (ENSCARG00000026350)	ENSCARG00000022291	s100b (ENSCARG00000022164)	sh3bp4a (ENSCARG00000022133)	arl4ca (ENSCARG00000022131)	ENSCARG00000022126	ENSCARG00000022123	aox5 (ENSCARG00000011547)	ENSCARG00000011162	bzw1a (ENSCARG00000011114)	ENSCARG00000011108	ENSCARG00000011084
Cyprininae_a	ANCESTRAL SPECIES	372	ENSGT00940000158204.d.b	ENSGT00940000164753.b.j	ENSGT00550000075065.b.b	ENSGT00390000005372.f.e.a.b	ENSGT00940000163944.b	ENSGT00940000160342.f.a	ENSGT00940000159655.e	ENSGT00950000182969.B.c.a.b.f	ENSGT00940000157211.k.b	ENSGT00940000156353.u.b.f	ENSGT00940000159094.e.a	ENSGT00940000153470.a.a.a.a.e #13	ENSGT00390000001170.a.b.d #15	ENSGT00940000155759.e.b.a #17	ENSGT00940000158559.d #21	ENSGT00940000156095.m.a.b #22	ENSGT00940000157541.e.w	ENSGT00390000015050.`b.b.b	ENSGT00940000155992.c.b.g	ENSGT00390000015709.b	ENSGT00940000156180.e.a	ENSGT00390000001225.q
Common carp reference	MODERN SPECIES	5	dpp4 (ENSCCRG00000040562)	ENSCCRG00000021094	ENSCCRG00000040534	ENSCCRG00000040545	crygs1 (ENSCCRG00000041398)	ENSCCRG00000040513	ENSCCRG00000072057	ENSCCRG00000058389	ptpn4b (ENSCCRG00000046118)	ENSCCRG00000058051	ENSCCRG00000071402	mgat5 (ENSCCRG00000067276) #13	ENSCCRG00000080602 #15	ENSCCRG00000045345	ENSCCRG00000005743 #21	ENSCCRG00000066299 #22	rnd3a (ENSCCRG00000007684)	mmadhca (ENSCCRG00000035622)	adarb1a (ENSCCRG00000035133)	slx9 (ENSCCRG00000038404)	ENSCCRG00000041263	cnot9 (ENSCCRG00000027911)	ftcd (ENSCCRG00000027372)	mstna (ENSCCRG00000027350)	stat1a (ENSCCRG00000026976)	glsa (ENSCCRG00000062028)	nab1a (ENSCCRG00000031919)	mfsd6a (ENSCCRG00000031910)	ENSCCRG00000028849	ahr1b (ENSCCRG00000060117)	ahr2 (ENSCCRG00000015382)
Golden-line barbel	MODERN SPECIES	86	sgsh (ENSSGRG00000028057)	npb (ENSSGRG00000028058)	pcyt2 (ENSSGRG00000028060)	ENSSGRG00000028149	GCG (ENSSGRG00000028150)	dpp4 (ENSSGRG00000028152)	crygs1 (ENSSGRG00000028259)	ENSSGRG00000028260	ptpn4b (ENSSGRG00000028262)	MRAS (ENSSGRG00000029052)	PTH2R (ENSSGRG00000029056)	mgat5 (ENSSGRG00000029070) #13	TMEM163 (ENSSGRG00000029291) #15	ccnt2b (ENSSGRG00000029292) #17	ENSSGRG00000029353 #21	R3HDM1 (ENSSGRG00000029392) #22	rnd3a (ENSSGRG00000029394)	mmadhca (ENSSGRG00000029400)	ENSSGRG00000029404	adarb1a (ENSSGRG00000029407)	slx9 (ENSSGRG00000029519)	ENSSGRG00000029526	cnot9 (ENSSGRG00000029839)	ftcd (ENSSGRG00000029876)	mstna (ENSSGRG00000030028)	stat1a (ENSSGRG00000030033)	glsa (ENSSGRG00000030052)	ENSSGRG00000031460	mfsd6a (ENSSGRG00000031461)	ENSSGRG00000031462	ahr1b (ENSSGRG00000031467)
Zebrafish	MODERN SPECIES	14	pcyt2 (ENSDARG00000043003)	gcga (ENSDARG00000079296)	dpp4 (ENSDARG00000079420)	mettl21a (ENSDARG00000012051)	crygs1 (ENSDARG00000042992)	KRT222 (ENSDARG00000071518)	krt97 (ENSDARG00000000212)	krt96 (ENSDARG00000095147)	ptpn4b (ENSDARG00000000183)	MRAS (ENSDARG00000062865)	PTH2R (ENSDARG00000021186)	mgat5 (ENSDARG00000071506) #13	TMEM163 (ENSDARG00000088227) #15	ccnt2b (ENSDARG00000036510) #17	ZRANB3 (ENSDARG00000091538) #21	ENSDARG00000101458 #22	rnd3a (ENSDARG00000076799)	ENSDARG00000105974	mmadhca (ENSDARG00000041602)	cep70 (ENSDARG00000076965)	adarb1a (ENSDARG00000041609)	slx9 (ENSDARG00000071500)	ENSDARG00000057975	cnot9 (ENSDARG00000033855)	ftcd (ENSDARG00000007421)	mstna (ENSDARG00000042947)	stat1a (ENSDARG00000006266)	glsa (ENSDARG00000062812)	nab1a (ENSDARG00000042940)	mfsd6a (ENSDARG00000032318)	ahr1b (ENSDARG00000023537)
Euteleosteomorpha	ANCESTRAL SPECIES	140										ENSGT00940000159094.e	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a	ENSGT00390000008033	ENSGT00940000157521.a.b ##37	ENSGT00940000167103	ENSGT00940000166136	ENSGT00390000012561.b.pb.b
Protacanthopterygii	ANCESTRAL SPECIES	27	ENSGT01090000259985.b.b.a.b	ENSGT00390000010218	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00390000013693	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT00940000159699	ENSGT00940000168322	ENSGT00950000183030.d	ENSGT00940000157128	ENSGT00730000111163	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a	ENSGT00390000008033	ENSGT00940000157521.a.b ##37	ENSGT00940000167103	ENSGT00940000166136	ENSGT00390000012561.b.pb.b	ENSGT00950000183114.a.b.b
Salmoninae	ANCESTRAL SPECIES	227	ENSGT01090000259985.b.b.a.a	ENSGT01090000259985.b.b.a.b	ENSGT00390000010218	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00390000013693.c	ENSGT00940000154342.C.id.a.b.a.a.b	ENSGT00530000063484.b.b.d.b	ENSGT00940000159699	ENSGT00940000168322	ENSGT00950000183030.c.b.a	ENSGT00940000157128	ENSGT00730000111163	ENSGT00940000155759.e.b #17	ENSGT00940000158559.g #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b.a.b	ENSGT00940000158539.b.a.a	ENSGT00530000064137.a.b.v	ENSGT00390000016542
Salmoninae_a	ANCESTRAL SPECIES	81	ENSGT00390000011985	ENSGT00390000004450	ENSGT01090000259985.b.b.a.a	ENSGT01090000259985.b.b.a.b	ENSGT00390000010218	ENSGT00390000016929	ENSGT00940000155466.e.a.d	ENSGT00390000013693.c	ENSGT00950000183030.d	ENSGT00940000157128	ENSGT00730000111163	ENSGT00940000155759.e.b #17	ENSGT00940000158559.g #21	ENSGT00940000168614	ENSGT00940000158559.h #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b.a.b	ENSGT00940000158539.b.a.a	ENSGT00530000064137.a.b.v	ENSGT00390000016542	ENSGT00390000008490	ENSGT00940000154435	ENSGT00940000154989.h	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.fd.a	ENSGT01030000235355
Salmo	ANCESTRAL SPECIES	74	ENSGT00390000011985	ENSGT00390000004450	ENSGT01090000259985.b.b.a.a	ENSGT01060000249324.b.a	ENSGT01090000259985.b.b.a.b	ENSGT00390000010218	ENSGT00390000016929.f	ENSGT00940000154342.C.id.a.b.a.a.b	ENSGT00530000063484.b.b.d.b	ENSGT00940000159699	ENSGT00950000183030.c.b.a	ENSGT00940000157128	ENSGT00730000111163	ENSGT00940000155759.e.b #17	ENSGT00940000158559.g #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b.g	ENSGT00390000000220.B.c.a.e	ENSGT00940000158539.b.a.b	ENSGT00530000064137.a.b.v	ENSGT00390000016542	ENSGT00390000008490	ENSGT00940000154435	ENSGT00940000154989.h	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.gd	ENSGT01030000235355.i	ENSGT00940000164706.a.h
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000006440	ENSSSAG00000006432	ENSSSAG00000117930	ENSSSAG00000115411	ENSSSAG00000099141	ENSSSAG00000090548	ENSSSAG00000099225	ENSSSAG00000086775	ENSSSAG00000104409	ENSSSAG00000091802	ENSSSAG00000083565	ENSSSAG00000118024	chsta (ENSSSAG00000007896)	ccnt2b (ENSSSAG00000084951) #17	ENSSSAG00000112090 #21	ENSSSAG00000111385 #22	ENSSSAG00000111336	rnd3a (ENSSSAG00000028722)	mmadhca (ENSSSAG00000043120)	LYPD6 (ENSSSAG00000120479)	KIF5C (ENSSSAG00000105535)	ENSSSAG00000084473	orc4 (ENSSSAG00000050203)	ENSSSAG00000043328	ENSSSAG00000115158	ENSSSAG00000086536	ENSSSAG00000010857	ENSSSAG00000082395	ENSSSAG00000043070	ENSSSAG00000104329	ENSSSAG00000081944
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000119735	ENSSSAG00000058545	ENSSSAG00000100452	ENSSSAG00000085181	ENSSSAG00000054615	ENSSSAG00000119598	ENSSSAG00000114258	ENSSSAG00000083249	ENSSSAG00000008329	ENSSSAG00000095929	ENSSSAG00000085926	ENSSSAG00000041565	ENSSSAG00000007904	ccnt2b (ENSSSAG00000076456) #17	ENSSSAG00000007917 #21	ENSSSAG00000041743 #22	ENSSSAG00000042023	rnd3a (ENSSSAG00000113109)	mmadhca (ENSSSAG00000092166)	LYPD6 (ENSSSAG00000043041)	KIF5C (ENSSSAG00000082971)	ENSSSAG00000050445	ORC4 (ENSSSAG00000108029)	HSF2BP (ENSSSAG00000091676)	ENSSSAG00000095841	ENSSSAG00000096622	CRYAA (ENSSSAG00000043363)	cbsa (ENSSSAG00000001011)	ENSSSAG00000042195	ENSSSAG00000107867	ENSSSAG00000014048
River trout	DUPLICATION
River trout	MODERN SPECIES	483	tmem47 (ENSSTUG00000043804)	ENSSTUG00000043810	rpl31 (ENSSTUG00000043813)	chst10 (ENSSTUG00000043846)	ENSSTUG00000043871	ccnt2b (ENSSTUG00000043894) #17	ENSSTUG00000043977	ENSSTUG00000043995	ENSSTUG00000044002	ccnt2b (ENSSTUG00000044020) #17	rnd3a (ENSSTUG00000044053)	ENSSTUG00000044056	ENSSTUG00000044062 #22	ENSSTUG00000044155 #21	ENSSTUG00000044158 #21	ENSSTUG00000044180 #22	ENSSTUG00000044292	rnd3a (ENSSTUG00000044296)	mmadhca (ENSSTUG00000044301)	lypd6 (ENSSTUG00000044308)
River trout	MODERN SPECIES	483									lypd6 (ENSSTUG00000044308)	mmadhca (ENSSTUG00000044301)	rnd3a (ENSSTUG00000044296)	ENSSTUG00000044292	ENSSTUG00000044180 #22	ENSSTUG00000044158 #21	ENSSTUG00000044155 #21	ENSSTUG00000044062 #22	ENSSTUG00000044056	rnd3a (ENSSTUG00000044053)	ccnt2b (ENSSTUG00000044020) #17	ENSSTUG00000044002	ENSSTUG00000043995	ENSSTUG00000043977	ccnt2b (ENSSTUG00000043894) #17	ENSSTUG00000043871	chst10 (ENSSTUG00000043846)	rpl31 (ENSSTUG00000043813)	ENSSTUG00000043810	tmem47 (ENSSTUG00000043804)	ace2 (ENSSTUG00000040677)	ENSSTUG00000040472	zgc:113276 (ENSSTUG00000040465)
Oncorhynchus	ANCESTRAL SPECIES	86									ENSGT00950000183030.c.a.a.a	ENSGT00940000157128	ENSGT00730000111163	ENSGT00940000155759.e.b #17	ENSGT00940000158559.g #21	ENSGT00940000168614	ENSGT00940000158559.h #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596.e	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.c.a	ENSGT00940000158539.b.a.a	ENSGT00530000064137.a.b.v	ENSGT00390000016542	ENSGT00390000008490	ENSGT00940000154435	ENSGT00940000154989.h	ENSGT00940000156445.r	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a.gd	ENSGT00940000164706.a
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000066789	ENSOMYG00000038820	ENSOMYG00000049095	ENSOMYG00000065934	ENSOMYG00000070228	ENSOMYG00000061250	ENSOMYG00000074825	ENSOMYG00000049175	ENSOMYG00000076124	ENSOMYG00000069122	ENSOMYG00000059058	ENSOMYG00000052458	ccnt2b (ENSOMYG00000049382) #17	ENSOMYG00000059432	ENSOMYG00000034308 #21	ENSOMYG00000034300 #22	ENSOMYG00000077776	ENSOMYG00000054856	rnd3a (ENSOMYG00000034269)	mmadhca (ENSOMYG00000034217)	LYPD6 (ENSOMYG00000034186)	KIF5C (ENSOMYG00000067609)	ENSOMYG00000034153	ORC4 (ENSOMYG00000034092)	HSF2BP (ENSOMYG00000008767)	ENSOMYG00000034044	SIK1 (ENSOMYG00000077880)	ENSOMYG00000057947	CRYAA (ENSOMYG00000042378)	cbsa (ENSOMYG00000001715)	ENSOMYG00000001839
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000075638	ENSOMYG00000050828	ENSOMYG00000073976	ENSOMYG00000052901	ENSOMYG00000066012	ENSOMYG00000063398	faimb (ENSOMYG00000056887)	ENSOMYG00000053361	ENSOMYG00000076474	gbx2 (ENSOMYG00000012559)	ENSOMYG00000002871	ENSOMYG00000002791	ENSOMYG00000068512	ccnt2b (ENSOMYG00000002822) #17	ENSOMYG00000048525 #21	ENSOMYG00000062480 #22	ENSOMYG00000073774	rnd3a (ENSOMYG00000049796)	mmadhca (ENSOMYG00000058850)	LYPD6 (ENSOMYG00000052898)	KIF5C (ENSOMYG00000063803)	ENSOMYG00000057620	ORC4 (ENSOMYG00000024511)	ENSOMYG00000034059	ENSOMYG00000008789	ENSOMYG00000034036	ENSOMYG00000058905	ENSOMYG00000034021	cbs (ENSOMYG00000001830)	ENSOMYG00000001552	ENSOMYG00000008794
Oncorhynchus_a	ANCESTRAL SPECIES	306												ENSGT00950000183030.c.a.a.a	ENSGT00940000157128	ENSGT00940000155759.e.b #17	ENSGT00940000158559.g #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596.f
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	187													ccnt2b (ENSOKIG00005039791) #17	ZRANB3 (ENSOKIG00005039300) #21	ENSOKIG00005039229	ENSOKIG00005038953 #22	ENSOKIG00005038907
Coho salmon	MODERN SPECIES	34	ENSOKIG00005048715	ENSOKIG00005048708	ENSOKIG00005048685	ENSOKIG00005048672	ENSOKIG00005048665	GTF3C3 (ENSOKIG00005048340)	ENSOKIG00005048189	DMD (ENSOKIG00005047018)	ENSOKIG00005046828	ENSOKIG00005046782	ENSOKIG00005046761	ENSOKIG00005046757	CHST10 (ENSOKIG00005046752)	ccnt2b (ENSOKIG00005046718) #17	ZRANB3 (ENSOKIG00005046546) #21	ENSOKIG00005046446 #22	ENSOKIG00005046435	rnd3a (ENSOKIG00005046429)	mmadhca (ENSOKIG00005046425)	LYPD6 (ENSOKIG00005046418)	KIF5C (ENSOKIG00005045422)	MBD5 (ENSOKIG00005045318)	orc4 (ENSOKIG00005045130)	ENSOKIG00005045104	ENSOKIG00005045098	ENSOKIG00005045094	cbsa (ENSOKIG00005044876)	ENSOKIG00005044792	ENSOKIG00005044779	ENSOKIG00005044771	ENSOKIG00005044760
Huchen	MODERN SPECIES	3563															ENSHHUG00000038614 #21	ENSHHUG00000038653 #22	ENSHHUG00000038702	rnd3a (ENSHHUG00000038709)
Northern pike	MODERN SPECIES	21	ENSELUG00000012180	pcnp (ENSELUG00000012203)	gtf3c3 (ENSELUG00000012293)	HECW2 (ENSELUG00000012420)	ENSELUG00000012538	DMD (ENSELUG00000013630)	ENSELUG00000029586	tmem47 (ENSELUG00000013767)	rpl31 (ENSELUG00000013824)	chst10 (ENSELUG00000013861)	zc3h13 (ENSELUG00000013945)	ccnt2b (ENSELUG00000014286) #17	ZRANB3 (ENSELUG00000014333) #21	ENSELUG00000014359	ENSELUG00000014373	R3HDM1 (ENSELUG00000014413) #22	RND3 (ENSELUG00000014441)	mmadhca (ENSELUG00000014508)	LYPD6 (ENSELUG00000026726)	KIF5C (ENSELUG00000014707)	MBD5 (ENSELUG00000014723)	orc4 (ENSELUG00000014828)	ACVR2A (ENSELUG00000014935)	ENSELUG00000030788	zeb2b (ENSELUG00000014998)	ENSELUG00000029431	KYNU (ENSELUG00000015091)	LRP1B (ENSELUG00000015279) ##37	ENSELUG00000015484	ENSELUG00000015531	bzw1a (ENSELUG00000015556)
Acanthomorphata	ANCESTRAL SPECIES	253								ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d
Euacanthomorphacea	ANCESTRAL SPECIES	49	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Percomorphaceae	ANCESTRAL SPECIES	22	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Tiger tail seahorse	MODERN SPECIES	148	ENSHCOG00000014052	MID1 (ENSHCOG00000000781)	ARHGAP6 (ENSHCOG00000014002)	MSL3 (ENSHCOG00000013930)	ENSHCOG00000013877	ENSHCOG00000013773	ENSHCOG00000013728	XKR6 (ENSHCOG00000013553)	enpp4 (ENSHCOG00000013516)	clic5a (ENSHCOG00000013508)	mgat5 (ENSHCOG00000013483) #13	TMEM163 (ENSHCOG00000013442) #15	ccnt2b (ENSHCOG00000013436) #17	ccnt2b (ENSHCOG00000013409) #17	ZRANB3 (ENSHCOG00000013395) #21	R3HDM1 (ENSHCOG00000013366) #22	ENSHCOG00000013302	rnd3a (ENSHCOG00000013290)	mmadhca (ENSHCOG00000013268)	LYPD6 (ENSHCOG00000013260)	pspc1 (ENSHCOG00000013251)	ENSHCOG00000013243	ENSHCOG00000013228	NBEAL1 (ENSHCOG00000013213)	XIRP2 (ENSHCOG00000013116)	ENSHCOG00000013102	B3GALT1 (ENSHCOG00000013089)	ABCB11 (ENSHCOG00000013058)	ENSHCOG00000012905	atp5f1b (ENSHCOG00000012891)	ENSHCOG00000012868
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Tetraodontidae	ANCESTRAL SPECIES	22	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Tetraodon	MODERN SPECIES	18	GABRA5 (ENSTNIG00000014404)	GABRG3 (ENSTNIG00000014405)	ENSTNIG00000005583	DBI (ENSTNIG00000019060)	STEAP3 (ENSTNIG00000019061)	C1QL2 (ENSTNIG00000019062)	ENSTNIG00000003013	ENSTNIG00000014270	XKR6 (ENSTNIG00000014269)	enpp4 (ENSTNIG00000014268)	clic5a (ENSTNIG00000007008)	mgat5 (ENSTNIG00000007007) #13	TMEM163 (ENSTNIG00000010365) #15	ccnt2b (ENSTNIG00000010364) #17	ENSTNIG00000010363 #21	ENSTNIG00000010362 #22	rnd3a (ENSTNIG00000010361)	mmadhca (ENSTNIG00000010360)	lypd6 (ENSTNIG00000010359)	pspc1 (ENSTNIG00000010358)	ENSTNIG00000001451	ENSTNIG00000010357	ENSTNIG00000010356	NBEAL1 (ENSTNIG00000010355)	ENSTNIG00000001736	STRADB (ENSTNIG00000010354)	TRAK2 (ENSTNIG00000010353)	ENSTNIG00000001084	nudt15 (ENSTNIG00000010352)	cpo (ENSTNIG00000010351)	cckbra (ENSTNIG00000010350)
Fugu	MODERN SPECIES	20	ENSTRUG00000013033	DBI (ENSTRUG00000029655)	STEAP3 (ENSTRUG00000012949)	C1QL2 (ENSTRUG00000012932)	en1a (ENSTRUG00000012905)	ENSTRUG00000022159	ENSTRUG00000022709	ENSTRUG00000012817	XKR6 (ENSTRUG00000012716)	enpp4 (ENSTRUG00000012609)	clic5a (ENSTRUG00000012502)	mgat5 (ENSTRUG00000012306) #13	TMEM163 (ENSTRUG00000012240) #15	ccnt2b (ENSTRUG00000024469) #17	ZRANB3 (ENSTRUG00000011885) #21	ENSTRUG00000011654 #22	rnd3 (ENSTRUG00000029930)	mmadhca (ENSTRUG00000021149)	lypd6 (ENSTRUG00000026168)	pspc1 (ENSTRUG00000011335)	ENSTRUG00000023649	ENSTRUG00000020350	NBEAL1 (ENSTRUG00000010979)	STRADB (ENSTRUG00000010953)	TRAK2 (ENSTRUG00000010804)	ENSTRUG00000029239	ENSTRUG00000024622	nudt15 (ENSTRUG00000024544)	cpo (ENSTRUG00000010265)	cckbra (ENSTRUG00000032665)	NALF1 (ENSTRUG00000010009)
Eupecaria_A	ANCESTRAL SPECIES	23	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Ballan wrasse	MODERN SPECIES	791															ENSLBEG00000027937 #21	ENSLBEG00000027981 #22
Eupecaria_B	ANCESTRAL SPECIES	23	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Perciformes	ANCESTRAL SPECIES	24	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Perciformes_a	ANCESTRAL SPECIES	25	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Channel bull blenny	MODERN SPECIES	11	ENSCGOG00000003026	ENSCGOG00000003040	ENSCGOG00000003071	STEAP3 (ENSCGOG00000003170)	EN1 (ENSCGOG00000003179)	ENSCGOG00000003183	ENSCGOG00000003197	ENSCGOG00000003204	XKR6 (ENSCGOG00000003206)	enpp4 (ENSCGOG00000003211)	clic5a (ENSCGOG00000003218)	mgat5 (ENSCGOG00000003235) #13	TMEM163 (ENSCGOG00000003568) #15	ccnt2b (ENSCGOG00000003577) #17	ZRANB3 (ENSCGOG00000003816) #21	ENSCGOG00000004104 #22	rnd3a (ENSCGOG00000004129)	mmadhca (ENSCGOG00000004164)	lypd6 (ENSCGOG00000004167)	pspc1 (ENSCGOG00000004178)	ENSCGOG00000004196	FDX1 (ENSCGOG00000004206)	ENSCGOG00000004213	NBEAL1 (ENSCGOG00000004321)	STRADB (ENSCGOG00000005981)	TRAK2 (ENSCGOG00000006521)	ENSCGOG00000007678	chn1 (ENSCGOG00000007702)	FARP1 (ENSCGOG00000008418)	ggact.3 (ENSCGOG00000010730)	arl13b (ENSCGOG00000010733)
Pike perch	MODERN SPECIES	9	DBI (ENSSLUG00000025615)	STEAP3 (ENSSLUG00000025618)	C1QL2 (ENSSLUG00000025623)	EN1 (ENSSLUG00000025626)	ENSSLUG00000025630	ENSSLUG00000025634	ENSSLUG00000025637	ENSSLUG00000025638	XKR6 (ENSSLUG00000025643)	enpp4 (ENSSLUG00000025644)	clic5a (ENSSLUG00000025646)	mgat5 (ENSSLUG00000025652) #13	TMEM163 (ENSSLUG00000025655) #15	ccnt2b (ENSSLUG00000025657) #17	ZRANB3 (ENSSLUG00000025660) #21	ENSSLUG00000025667 #22	rnd3a (ENSSLUG00000025671)	mmadhca (ENSSLUG00000025676)	lypd6 (ENSSLUG00000025680)	pspc1 (ENSSLUG00000025685)	ENSSLUG00000025687	ENSSLUG00000025691	ENSSLUG00000025695	NBEAL1 (ENSSLUG00000025715)	STRADB (ENSSLUG00000025773)	TRAK2 (ENSSLUG00000025815)	ENSSLUG00000025841	ENSSLUG00000025844	nudt15 (ENSSLUG00000025847)	cpo (ENSSLUG00000025850)	cckbra (ENSSLUG00000025853)
Cottioidei	ANCESTRAL SPECIES	24	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Stickleback	MODERN SPECIES		ENSGACG00000014963	STEAP3 (ENSGACG00000014961)	C1QL2 (ENSGACG00000014957)	EN1 (ENSGACG00000014956)	ENSGACG00000014951	ENSGACG00000014950	ENSGACG00000014949	ENSGACG00000014946	enpp4 (ENSGACG00000014941)	clic5a (ENSGACG00000014937)	mgat5 (ENSGACG00000014934) #13	TMEM163 (ENSGACG00000014933) #15	ccnt2b (ENSGACG00000014932) #17	ENSGACG00000014931	ZRANB3 (ENSGACG00000014926) #21	ENSGACG00000014925 #22	rnd3a (ENSGACG00000014917)	mmadhca (ENSGACG00000014909)	lypd6 (ENSGACG00000014906)	pspc1 (ENSGACG00000014901)	ENSGACG00000014898	RDX (ENSGACG00000014895)	MCF2L (ENSGACG00000014889)	cab39l (ENSGACG00000014886)	cdadc1 (ENSGACG00000014883)	rcbtb1 (ENSGACG00000014869)	ENSGACG00000014859	tubgcp3 (ENSGACG00000014853)	ATP11A (ENSGACG00000014851)	SOX1 (ENSGACG00000014850)	arhgef7b (ENSGACG00000014843)
Eupecaria_C	ANCESTRAL SPECIES	27	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	31	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
European seabass	MODERN SPECIES	15	DBI (ENSDLAG00005023752)	C1QL2 (ENSDLAG00005023738)	ENSDLAG00005023736	STEAP3 (ENSDLAG00005029717)	ENSDLAG00005023726	ENSDLAG00005023724	ENSDLAG00005031685	ENSDLAG00005023713	ENSDLAG00005023712	ENSDLAG00005023710	ENSDLAG00005030212	mgat5 (ENSDLAG00005026513) #13	ENSDLAG00005026670 #15	ccnt2b (ENSDLAG00005023684) #17	ENSDLAG00005023627 #21	ENSDLAG00005023597 #22	ENSDLAG00005023591	rnd3a (ENSDLAG00005034402)	mmadhca (ENSDLAG00005034278)	LYPD6 (ENSDLAG00005031232)	ENSDLAG00005023576	ENSDLAG00005023567	ENSDLAG00005033325	ENSDLAG00005032514	ENSDLAG00005022031	ENSDLAG00005033362	ENSDLAG00005031254	ENSDLAG00005021929	ENSDLAG00005021925	ENSDLAG00005030553	ENSDLAG00005021907
Large yellow croaker	MODERN SPECIES	486	DBI (ENSLCRG00005006135)	STEAP3 (ENSLCRG00005006131)	C1QL2 (ENSLCRG00005006129)	EN1 (ENSLCRG00005006128)	ENSLCRG00005006127	ENSLCRG00005006126	ENSLCRG00005006124	ENSLCRG00005006123	XKR6 (ENSLCRG00005006121)	enpp4 (ENSLCRG00005006120)	clic5a (ENSLCRG00005006112)	mgat5 (ENSLCRG00005006111) #13	TMEM163 (ENSLCRG00005006110) #15	ccnt2b (ENSLCRG00005006109) #17	ZRANB3 (ENSLCRG00005006064) #21	ENSLCRG00005006060 #22	ENSLCRG00005006057	rnd3a (ENSLCRG00005006055)	mmadhca (ENSLCRG00005006054)	lypd6 (ENSLCRG00005006053)	pspc1 (ENSLCRG00005006052)	ENSLCRG00005006048	FDX1 (ENSLCRG00005006047)	ENSLCRG00005006045	NBEAL1 (ENSLCRG00005004183)	STRADB (ENSLCRG00005004124)	TRAK2 (ENSLCRG00005003901)	ENSLCRG00005003896	nudt15 (ENSLCRG00005003893)	cckbra (ENSLCRG00005003891)	cpo (ENSLCRG00005003887)
Gilthead seabream	MODERN SPECIES	16	DBI (ENSSAUG00010026958)	STEAP3 (ENSSAUG00010026960)	C1QL2 (ENSSAUG00010026961)	EN1 (ENSSAUG00010026963)	ENSSAUG00010026965	ENSSAUG00010026966	ENSSAUG00010026968	ENSSAUG00010026973	XKR6 (ENSSAUG00010026978)	enpp4 (ENSSAUG00010026981)	clic5a (ENSSAUG00010026986)	mgat5 (ENSSAUG00010026990) #13	TMEM163 (ENSSAUG00010026995) #15	ccnt2b (ENSSAUG00010026997) #17	ZRANB3 (ENSSAUG00010027005) #21	ENSSAUG00010027045 #22	rnd3a (ENSSAUG00010027051)	mmadhca (ENSSAUG00010027052)	lypd6 (ENSSAUG00010027054)	pspc1 (ENSSAUG00010027057)	FDX1 (ENSSAUG00010027059)	ENSSAUG00010027062	NBEAL1 (ENSSAUG00010027079)	STRADB (ENSSAUG00010027096)	TRAK2 (ENSSAUG00010027109)	ENSSAUG00010027155	nudt15 (ENSSAUG00010027156)	cpo (ENSSAUG00010027159)	cckbra (ENSSAUG00010004798)	NALF1 (ENSSAUG00010004805)	lig4 (ENSSAUG00010004807)
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Anabantaria	ANCESTRAL SPECIES	23	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Anabantoidei	ANCESTRAL SPECIES	23	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000164275.f.d	ENSGT00390000018553	ENSGT00940000153514.b.m.b	ENSGT00940000166946	ENSGT00940000159848	ENSGT00940000154348.c.b.a.b.b	ENSGT00390000007055	ENSGT00940000155502	ENSGT00940000156712.a	ENSGT00950000182837.b.b.c.b	ENSGT01030000234765
Climbing perch	MODERN SPECIES	11	ENSATEG00000029356	ENSATEG00000001078	DBI (ENSATEG00000000972)	STEAP3 (ENSATEG00000000840)	C1QL2 (ENSATEG00000000918)	EN1 (ENSATEG00000027645)	ENSATEG00000000790	ENSATEG00000000640	ENSATEG00000000590	ENSATEG00000000585	ENSATEG00000000553	mgat5 (ENSATEG00000000484) #13	ENSATEG00000000446 #15	ccnt2b (ENSATEG00000000262) #17	ENSATEG00000000257 #21	ENSATEG00000000232 #22	ENSATEG00000000203	rnd3a (ENSATEG00000027236)	mmadhca (ENSATEG00000000140)	LYPD6 (ENSATEG00000027744)	ENSATEG00000000050	ENSATEG00000020033	ENSATEG00000019996	ENSATEG00000019972	ENSATEG00000019959	ENSATEG00000019898	ENSATEG00000019815	ENSATEG00000019752	ENSATEG00000019703	ENSATEG00000019695	ENSATEG00000019666
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000016287	creb3l1 (ENSBSLG00000016299)	ndufs1 (ENSBSLG00000016535)	ENSBSLG00000018636	ENSBSLG00000018721	ENSBSLG00000018836	ENSBSLG00000018957	enpp4 (ENSBSLG00000019005)	ENSBSLG00000019061	clic5a (ENSBSLG00000019150)	mgat5 (ENSBSLG00000019651) #13	clic5a (ENSBSLG00000020185)	TMEM163 (ENSBSLG00000020228) #15	ccnt2b (ENSBSLG00000021109) #17	ZRANB3 (ENSBSLG00000021664) #21	ENSBSLG00000022575 #22	rnd3a (ENSBSLG00000022732)	mmadhca (ENSBSLG00000022858)	lypd6 (ENSBSLG00000022949)	ENSBSLG00000023109	ENSBSLG00000023278	ENSBSLG00000023315	unc50 (ENSBSLG00000023389)	ENSBSLG00000023567	EN1 (ENSBSLG00000023687)	C1QL2 (ENSBSLG00000023705)	STEAP3 (ENSBSLG00000023728)	ENSBSLG00000023766	ENSBSLG00000023884	ENSBSLG00000024111	GABRG3 (ENSBSLG00000024200)
Zig-zag eel	MODERN SPECIES	11	DBI (ENSMAMG00000005224)	STEAP3 (ENSMAMG00000005197)	C1QL2 (ENSMAMG00000027618)	EN1 (ENSMAMG00000005134)	ENSMAMG00000005123	ENSMAMG00000024621	ENSMAMG00000005081	ENSMAMG00000005052	ENSMAMG00000005036	ENSMAMG00000005031	ENSMAMG00000005001 #13	ENSMAMG00000004983	ENSMAMG00000004966 #15	ccnt2b (ENSMAMG00000004834) #17	ENSMAMG00000004740 #21	ENSMAMG00000004532 #22	ENSMAMG00000004507	rnd3a (ENSMAMG00000027887)	mmadhca (ENSMAMG00000004437)	LYPD6 (ENSMAMG00000025816)	ENSMAMG00000004333	ENSMAMG00000004303	ENSMAMG00000004286	ENSMAMG00000004278	SLITRK6 (ENSMAMG00000004266)	ENSMAMG00000004263	ENSMAMG00000004229	ENSMAMG00000004193	ENSMAMG00000004151	ENSMAMG00000004082	RUNX1 (ENSMAMG00000004023)
Carangaria	ANCESTRAL SPECIES	23	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Pleuronectoidei	ANCESTRAL SPECIES	42	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000155041	ENSGT00940000166048.a.b	ENSGT00940000156916	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Turbot	MODERN SPECIES		STEAP3 (ENSSMAG00000001182)	C1QL2 (ENSSMAG00000032521)	EN1 (ENSSMAG00000027117)	ENSSMAG00000001215	ENSSMAG00000001278	ENSSMAG00000001282	ENSSMAG00000001312	ENSSMAG00000001325	ENSSMAG00000001372	ENSSMAG00000001392	ENSSMAG00000001446	mgat5 (ENSSMAG00000001481) #13	ENSSMAG00000021998 #15	ccnt2b (ENSSMAG00000001603) #17	ENSSMAG00000001632 #21	ENSSMAG00000001669 #22	rnd3a (ENSSMAG00000001717)	mmadhca (ENSSMAG00000001742)	LYPD6 (ENSSMAG00000001729)	ENSSMAG00000001807	ENSSMAG00000024616	ENSSMAG00000001798	ENSSMAG00000001829	ENSSMAG00000001954	ENSSMAG00000001985	ENSSMAG00000002123	ENSSMAG00000002146	ENSSMAG00000023020	ENSSMAG00000003211	ENSSMAG00000003160	ENSSMAG00000003090
Tongue sole	MODERN SPECIES	5	ENSCSEG00000009365	GABRG3 (ENSCSEG00000009345)	ENSCSEG00000009328	DBI (ENSCSEG00000009319)	STEAP3 (ENSCSEG00000009309)	C1QL2 (ENSCSEG00000009299)	en1a (ENSCSEG00000009287)	ENSCSEG00000009282	ENSCSEG00000009277	XKR6 (ENSCSEG00000009261)	enpp4 (ENSCSEG00000009252)	clic5a (ENSCSEG00000009225)	mgat5 (ENSCSEG00000009182) #13	ccnt2b (ENSCSEG00000009159) #17	ZRANB3 (ENSCSEG00000009111) #21	ENSCSEG00000008944 #22	rnd3a (ENSCSEG00000008923)	mmadhca (ENSCSEG00000008909)	ENSCSEG00000008899	pspc1 (ENSCSEG00000008888)	ENSCSEG00000008879	obsl1a (ENSCSEG00000008831)	cybb (ENSCSEG00000008796)	ENSCSEG00000008773	dusp27 (ENSCSEG00000008768)	ENSCSEG00000008759	ENSCSEG00000008753	plaat1l (ENSCSEG00000008744)	ved (ENSCSEG00000008735)	gnsb (ENSCSEG00000008698)	polm (ENSCSEG00000008667)
Carangaria_A	ANCESTRAL SPECIES	23	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Barramundi perch	MODERN SPECIES	447													TMEM163 (ENSLCAG00010022724) #15	ccnt2b (ENSLCAG00010022687) #17	ZRANB3 (ENSLCAG00010022621) #21	ENSLCAG00010022590 #22	ENSLCAG00010022586	rnd3a (ENSLCAG00010022580)	mmadhca (ENSLCAG00010022578)	ENSLCAG00010022575	pspc1 (ENSLCAG00010022571)
Seriola	ANCESTRAL SPECIES	37	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000168614	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Greater amberjack	MODERN SPECIES	45	STEAP3 (ENSSDUG00000011279)	C1QL2 (ENSSDUG00000011247)	en1a (ENSSDUG00000011233)	ENSSDUG00000011188	ENSSDUG00000011220	ENSSDUG00000011180	ENSSDUG00000011149	XKR6 (ENSSDUG00000011123)	enpp4 (ENSSDUG00000011112)	clic5a (ENSSDUG00000011080)	clic5a (ENSSDUG00000011057)	mgat5 (ENSSDUG00000011000) #13	TMEM163 (ENSSDUG00000010975) #15	ccnt2b (ENSSDUG00000010842) #17	ENSSDUG00000010804 #21	ENSSDUG00000010749 #22	ENSSDUG00000010730	rnd3a (ENSSDUG00000010711)	mmadhca (ENSSDUG00000010681)	ENSSDUG00000010669	pspc1 (ENSSDUG00000010651)	ENSSDUG00000010627	ENSSDUG00000010611	ENSSDUG00000010605	NBEAL1 (ENSSDUG00000010494)	STRADB (ENSSDUG00000010463)	TRAK2 (ENSSDUG00000010429)	ENSSDUG00000010397	ENSSDUG00000010380	nudt15 (ENSSDUG00000010377)	cpo (ENSSDUG00000010368)
Yellowtail amberjack	MODERN SPECIES	3249	DBI (ENSSLDG00000005265)	STEAP3 (ENSSLDG00000005245)	C1QL2 (ENSSLDG00000005214)	en1a (ENSSLDG00000005196)	ENSSLDG00000005135	ENSSLDG00000005086	ENSSLDG00000005057	ENSSLDG00000005011	enpp4 (ENSSLDG00000004999)	mgat5 (ENSSLDG00000004933) #13	clic5a (ENSSLDG00000004904)	TMEM163 (ENSSLDG00000004880) #15	ccnt2b (ENSSLDG00000004703) #17	ENSSLDG00000004638	ENSSLDG00000004579 #21	ENSSLDG00000004499 #22	ENSSLDG00000004472	rnd3a (ENSSLDG00000004433)	mmadhca (ENSSLDG00000004384)	ENSSLDG00000004343	pspc1 (ENSSLDG00000004284)	ENSSLDG00000004236	FDX1 (ENSSLDG00000004217)	ENSSLDG00000004202	NBEAL1 (ENSSLDG00000003985)	STRADB (ENSSLDG00000003945)	TRAK2 (ENSSLDG00000003678)	ENSSLDG00000003613	ENSSLDG00000003593	nudt15 (ENSSLDG00000003584)	cpo (ENSSLDG00000003572)
Ovalentaria	ANCESTRAL SPECIES	23	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00940000175432	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Atherinomorphae	ANCESTRAL SPECIES	24	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Oryzias	ANCESTRAL SPECIES	26	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Oryzias_a	ANCESTRAL SPECIES	28	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000027090	ENSORLG00000004467	STEAP3 (ENSORLG00000004437)	C1QL2 (ENSORLG00000027553)	en1a (ENSORLG00000020825)	ENSORLG00000024509	ENSORLG00000025838	ENSORLG00000004413	ENSORLG00000004398	enpp4 (ENSORLG00000004391)	ENSORLG00000004371	mgat5 (ENSORLG00000004359) #13	TMEM163 (ENSORLG00000004336) #15	ccnt2b (ENSORLG00000004330) #17	ENSORLG00000004324 #21	ENSORLG00000004297 #22	ENSORLG00000028554	rnd3a (ENSORLG00000027249)	mmadhca (ENSORLG00000004249)	lypd6 (ENSORLG00000027539)	ENSORLG00000004232	ENSORLG00000028197	ENSORLG00000004189	ENSORLG00000024713	ENSORLG00000023425	STRADB (ENSORLG00000004118)	TRAK2 (ENSORLG00000024460)	ENSORLG00000004099	nudt15 (ENSORLG00000004095)	cpo (ENSORLG00000004091)	cckbra (ENSORLG00000024681)
Chinese medaka	MODERN SPECIES	1280											mgat5 (ENSOSIG00000016723) #13	TMEM163 (ENSOSIG00000016694) #15	ccnt2b (ENSOSIG00000016692) #17	ENSOSIG00000016682	ZRANB3 (ENSOSIG00000016660) #21	R3HDM1 (ENSOSIG00000016652) #22	RND3 (ENSOSIG00000016648)	mmadhca (ENSOSIG00000016646)	lypd6 (ENSOSIG00000016643)	pspc1 (ENSOSIG00000016639)	ENSOSIG00000016635	ENSOSIG00000016634	NBEAL1 (ENSOSIG00000016630)	TRAK2 (ENSOSIG00000016563)	cpo (ENSOSIG00000016549)	cckbra (ENSOSIG00000016547)	NALF1 (ENSOSIG00000016542)	lig4 (ENSOSIG00000016541)	irs2a (ENSOSIG00000016539)	acp2 (ENSOSIG00000016537)	gpr137c (ENSOSIG00000016534)
Oryzias_b	ANCESTRAL SPECIES	24	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Indian medaka	MODERN SPECIES	24	ENSOMEG00000004938	ENSOMEG00000004921	DBI (ENSOMEG00000004864)	STEAP3 (ENSOMEG00000004840)	C1QL2 (ENSOMEG00000004821)	en1a (ENSOMEG00000004805)	ENSOMEG00000004779	ENSOMEG00000000847	XKR6 (ENSOMEG00000004104)	enpp4 (ENSOMEG00000004100)	clic5a (ENSOMEG00000004076)	mgat5 (ENSOMEG00000004049) #13	TMEM163 (ENSOMEG00000000093) #15	ccnt2b (ENSOMEG00000003988) #17	ZRANB3 (ENSOMEG00000000999) #21	ENSOMEG00000003882 #22	ENSOMEG00000003869	rnd3a (ENSOMEG00000003854)	mmadhca (ENSOMEG00000003826)	lypd6 (ENSOMEG00000003798)	ENSOMEG00000003790	pspc1 (ENSOMEG00000003779)	FDX1 (ENSOMEG00000003743)	ENSOMEG00000003725	ENSOMEG00000003699	ENSOMEG00000003680	TRAK2 (ENSOMEG00000003627)	ENSOMEG00000003563	cpo (ENSOMEG00000003532)	cckbra (ENSOMEG00000003473)	NALF1 (ENSOMEG00000003462)
Javanese ricefish	MODERN SPECIES	11	ENSOJAG00000000990	DBI (ENSOJAG00000000968)	STEAP3 (ENSOJAG00000000961)	C1QL2 (ENSOJAG00000000951)	en1a (ENSOJAG00000000941)	ENSOJAG00000000934	ENSOJAG00000000917	ENSOJAG00000000914	enpp4 (ENSOJAG00000000907)	clic5a (ENSOJAG00000000902)	mgat5 (ENSOJAG00000000895) #13	ENSOJAG00000000891	TMEM163 (ENSOJAG00000000882) #15	ccnt2b (ENSOJAG00000000869) #17	ZRANB3 (ENSOJAG00000000816) #21	ENSOJAG00000000763 #22	ENSOJAG00000000756	rnd3a (ENSOJAG00000000753)	mmadhca (ENSOJAG00000000746)	lypd6 (ENSOJAG00000000738)	pspc1 (ENSOJAG00000000726)	ENSOJAG00000000715	FDX1 (ENSOJAG00000000707)	ENSOJAG00000000700	ENSOJAG00000000520	TRAK2 (ENSOJAG00000000484)	ENSOJAG00000000474	nudt15 (ENSOJAG00000000470)	cckbra (ENSOJAG00000000465)	cpo (ENSOJAG00000000417)	NALF1 (ENSOJAG00000000389)
Cyprinodontiformes	ANCESTRAL SPECIES	25	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Cyprinodontoidei	ANCESTRAL SPECIES	26	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
NAME_4	ANCESTRAL SPECIES	60	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Mummichog	MODERN SPECIES	2292	ENSFHEG00000019286	ENSFHEG00000019226	DBI (ENSFHEG00000019219)	STEAP3 (ENSFHEG00000019204)	C1QL2 (ENSFHEG00000019188)	en1a (ENSFHEG00000019151)	ENSFHEG00000019144	ENSFHEG00000019126	ENSFHEG00000019090	enpp4 (ENSFHEG00000019047)	clic5a (ENSFHEG00000019031)	mgat5 (ENSFHEG00000019020) #13	TMEM163 (ENSFHEG00000018901) #15	ccnt2b (ENSFHEG00000018866) #17	ZRANB3 (ENSFHEG00000018772) #21	ENSFHEG00000018713 #22	ENSFHEG00000018656	rnd3a (ENSFHEG00000018648)	ENSFHEG00000018624
Sheepshead minnow	MODERN SPECIES	121																ENSCVAG00000007582 #22	ENSCVAG00000007599	rnd3a (ENSCVAG00000007608)	ENSCVAG00000007625	mmadhca (ENSCVAG00000007634)	lypd6 (ENSCVAG00000007640)	ENSCVAG00000007679	ENSCVAG00000007693	FDX1 (ENSCVAG00000007697)	ENSCVAG00000007710	ENSCVAG00000007760	ENSCVAG00000007783	STRADB (ENSCVAG00000007795)	TRAK2 (ENSCVAG00000007810)	ENSCVAG00000007825	cpo (ENSCVAG00000007843)
Poeciliinae	ANCESTRAL SPECIES	23	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
Poecilia	ANCESTRAL SPECIES	30	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b	ENSGT00940000155696.ub
NAME_6	ANCESTRAL SPECIES	185	ENSGT00940000178790	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596
Sailfin molly	MODERN SPECIES	314						ENSPLAG00000017507	ENSPLAG00000017537	ENSPLAG00000017563	enpp4 (ENSPLAG00000017571)	clic5a (ENSPLAG00000017828)	mgat5 (ENSPLAG00000017913) #13	TMEM163 (ENSPLAG00000017951) #15	ENSPLAG00000017968	ENSPLAG00000018013 #17	ZRANB3 (ENSPLAG00000018028) #21	ENSPLAG00000018042 #22	ENSPLAG00000018066
Amazon molly	MODERN SPECIES	334	GABRG3 (ENSPFOG00000015891)	ENSPFOG00000015844	ENSPFOG00000015743	STEAP3 (ENSPFOG00000015718)	C1QL2 (ENSPFOG00000015710)	EN1 (ENSPFOG00000015708)	ENSPFOG00000015703	ENSPFOG00000015634	XKR6 (ENSPFOG00000015618)	enpp4 (ENSPFOG00000015598)	clic5a (ENSPFOG00000015587)	mgat5 (ENSPFOG00000015476) #13	TMEM163 (ENSPFOG00000015387) #15	ccnt2b (ENSPFOG00000015355) #17	ZRANB3 (ENSPFOG00000015201) #21	ENSPFOG00000015036 #22	ENSPFOG00000024481	rnd3a (ENSPFOG00000015005)
Guppy	MODERN SPECIES	450	ENSPREG00000008645	ENSPREG00000008609	DBI (ENSPREG00000008543)	STEAP3 (ENSPREG00000008519)	C1QL2 (ENSPREG00000008506)	EN1 (ENSPREG00000008500)	ENSPREG00000008463	ENSPREG00000008395	XKR6 (ENSPREG00000008364)	enpp4 (ENSPREG00000008345)	clic5a (ENSPREG00000008327)	mgat5 (ENSPREG00000008251) #13	TMEM163 (ENSPREG00000008218) #15	ENSPREG00000008207 #17	ENSPREG00000008183 #21	ENSPREG00000007902 #22	ENSPREG00000007840	rnd3a (ENSPREG00000007823)	ENSPREG00000007818	mmadhca (ENSPREG00000007808)	lypd6 (ENSPREG00000007798)	pspc1 (ENSPREG00000007786)	ENSPREG00000007759	ENSPREG00000007735	ENSPREG00000007727	NBEAL1 (ENSPREG00000007574)	ENSPREG00000007513	TRAK2 (ENSPREG00000007459)	ENSPREG00000007421	ENSPREG00000007392	cpo (ENSPREG00000007375)
Platyfish	MODERN SPECIES	16	ENSXMAG00000024278	ENSXMAG00000004137	DBI (ENSXMAG00000025676)	STEAP3 (ENSXMAG00000004127)	C1QL2 (ENSXMAG00000022253)	EN1 (ENSXMAG00000023001)	ENSXMAG00000007812	ENSXMAG00000007815	ENSXMAG00000007823	enpp4 (ENSXMAG00000007831)	clic5a (ENSXMAG00000007839)	mgat5 (ENSXMAG00000007846) #13	TMEM163 (ENSXMAG00000025051) #15	ENSXMAG00000007871 #17	ZRANB3 (ENSXMAG00000007875) #21	ENSXMAG00000007885 #22	ENSXMAG00000024543	rnd3a (ENSXMAG00000007915)	mmadhca (ENSXMAG00000027512)	lypd6 (ENSXMAG00000028207)	pspc1 (ENSXMAG00000007929)	ENSXMAG00000023505	ENSXMAG00000026774	ENSXMAG00000007945	ENSXMAG00000026060	ENSXMAG00000026591	STRADB (ENSXMAG00000007992)	TRAK2 (ENSXMAG00000008010)	ENSXMAG00000008029	cpo (ENSXMAG00000008049)	cckbra (ENSXMAG00000025852)
Aplocheiloidei	ANCESTRAL SPECIES	37	ENSGT00940000155607.mc.b	ENSGT00940000156402.A.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Turquoise killifish	MODERN SPECIES	1615	ENSNFUG00015000823	DHRS9 (ENSNFUG00015000820)	ATP5B (ENSNFUG00015000801)	ENSNFUG00015000767	KLHL41 (ENSNFUG00015000757)	oxgr1a.2 (ENSNFUG00015000753)	ENSNFUG00015000752	DZIP1 (ENSNFUG00015000738)	ABCC4 (ENSNFUG00015000602)	CLDN10 (ENSNFUG00015000564)	ENSNFUG00015000554	CLDN10 (ENSNFUG00015000543)	ccnt2b (ENSNFUG00015000513) #17	ZRANB3 (ENSNFUG00015000265) #21	ENSNFUG00015000086	ENSNFUG00015000072 #22	ENSNFUG00015002641	ENSNFUG00015002637	rnd3a (ENSNFUG00015002634)	MMADHC (ENSNFUG00015002629)	lypd6 (ENSNFUG00015002625)	PSPC1 (ENSNFUG00015002622)	ARHGAP20 (ENSNFUG00015002617)	FDX1 (ENSNFUG00015002614)	ENSNFUG00015002610	STRADB (ENSNFUG00015002380)	TRAK2 (ENSNFUG00015002261)	ENSNFUG00015002226	CCKBR (ENSNFUG00015002219)	ENSNFUG00015002215	cpo (ENSNFUG00015002207)
Mangrove rivulus	MODERN SPECIES	218						ENSKMAG00000013033	ENSKMAG00000013069	XKR6 (ENSKMAG00000013160)	enpp4 (ENSKMAG00000013180)	clic5a (ENSKMAG00000013193)	mgat5 (ENSKMAG00000013211) #13	TMEM163 (ENSKMAG00000013250) #15	ccnt2b (ENSKMAG00000013280) #17	ccnt2b (ENSKMAG00000013304) #17	ZRANB3 (ENSKMAG00000013326) #21	ENSKMAG00000013373 #22	rnd3a (ENSKMAG00000013429)	mmadhca (ENSKMAG00000013447)	lypd6 (ENSKMAG00000013478)	pspc1 (ENSKMAG00000013525)
Ovalentaria_B	ANCESTRAL SPECIES	22	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Pomacentridae	ANCESTRAL SPECIES	101												ENSGT00970000193621	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Pomacentridae_A	ANCESTRAL SPECIES	211												ENSGT00970000193621	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b
Amphiprion	ANCESTRAL SPECIES	244											ENSGT00940000155041.b	ENSGT00970000193621	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b
Clown anemonefish	MODERN SPECIES	1488											ENSAOCG00000004992	ENSAOCG00000000205	TMEM163 (ENSAOCG00000005007) #15	ccnt2b (ENSAOCG00000002622) #17	ZRANB3 (ENSAOCG00000005122) #21	ENSAOCG00000005192 #22	ENSAOCG00000005214	rnd3a (ENSAOCG00000005231)	mmadhca (ENSAOCG00000005247)	lypd6 (ENSAOCG00000005261)	pspc1 (ENSAOCG00000005279)	ENSAOCG00000005292	FDX1 (ENSAOCG00000000228)	ENSAOCG00000005315
Orange clownfish	MODERN SPECIES	16	ENSAPEG00000017329	ENSAPEG00000017320	VANGL1 (ENSAPEG00000017272)	ENSAPEG00000017225	poglut1 (ENSAPEG00000017201)	abcc4 (ENSAPEG00000016844)	timmdc1 (ENSAPEG00000016790)	abcc4 (ENSAPEG00000016691)	NBEAL1 (ENSAPEG00000016493)	ENSAPEG00000016452	ENSAPEG00000016440	ENSAPEG00000016426	TMEM163 (ENSAPEG00000016364) #15	ccnt2b (ENSAPEG00000016213) #17	ZRANB3 (ENSAPEG00000016183) #21	ENSAPEG00000016108 #22	ENSAPEG00000016092	rnd3a (ENSAPEG00000016066)	mmadhca (ENSAPEG00000016004)	lypd6 (ENSAPEG00000015964)	pspc1 (ENSAPEG00000015927)	ENSAPEG00000015914	FDX1 (ENSAPEG00000015905)	ENSAPEG00000015872	ENSAPEG00000015856	ENSAPEG00000015843	cbsa (ENSAPEG00000015786)	u2af1 (ENSAPEG00000015747)	ENSAPEG00000015737	zgc:172122 (ENSAPEG00000015731)	ENSAPEG00000015717
Spiny chromis	MODERN SPECIES	702												ENSAPOG00000021096	TMEM163 (ENSAPOG00000021075) #15	ccnt2b (ENSAPOG00000021056) #17	ZRANB3 (ENSAPOG00000020872) #21	ENSAPOG00000020850 #22	rnd3a (ENSAPOG00000020786)
Bicolor damselfish	MODERN SPECIES	1309											ENSSPAG00000004925	ENSSPAG00000004918	TMEM163 (ENSSPAG00000004897) #15	ccnt2b (ENSSPAG00000004875) #17	ZRANB3 (ENSSPAG00000004802) #21	ENSSPAG00000004648 #22
Cichlidae	ANCESTRAL SPECIES	30	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT01100000263563.c.a.b
Midas cichlid	MODERN SPECIES	353	ENSACIG00000019320	STEAP3 (ENSACIG00000019170)	C1QL2 (ENSACIG00000019137)	en1a (ENSACIG00000019134)	ENSACIG00000019078	ENSACIG00000019060	ENSACIG00000019035	XKR6 (ENSACIG00000019016)	enpp4 (ENSACIG00000019003)	clic5a (ENSACIG00000018990)	mgat5 (ENSACIG00000018953) #13	TMEM163 (ENSACIG00000018918) #15	ccnt2b (ENSACIG00000018889) #17	ccnt2b (ENSACIG00000018869) #17	ZRANB3 (ENSACIG00000018832) #21	ENSACIG00000018791 #22	ENSACIG00000018775	rnd3a (ENSACIG00000018760)	mmadhca (ENSACIG00000018742)	lypd6 (ENSACIG00000018720)	pspc1 (ENSACIG00000018695)	ENSACIG00000018684	FDX1 (ENSACIG00000018675)
Pseudocrenilabrinae	ANCESTRAL SPECIES	25	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b.g	ENSGT00940000161508.b.h
Nile tilapia	MODERN SPECIES	14	C1QL2 (ENSONIG00000012050)	EN1 (ENSONIG00000012049)	ENSONIG00000012044	ENSONIG00000023479	ENSONIG00000026060	ENSONIG00000041756	ENSONIG00000042753	ENSONIG00000012041	enpp4 (ENSONIG00000012038)	XKR6 (ENSONIG00000012039)	mgat5 (ENSONIG00000012031) #13	TMEM163 (ENSONIG00000012029) #15	ccnt2b (ENSONIG00000012028) #17	ENSONIG00000038192	ENSONIG00000012025 #21	ENSONIG00000012017 #22	ENSONIG00000022880	rnd3 (ENSONIG00000035223)	mmadhca (ENSONIG00000012014)	lypd6 (ENSONIG00000012012)	pspc1 (ENSONIG00000012010)	ENSONIG00000012007	FDX1 (ENSONIG00000012006)	ENSONIG00000032650	NBEAL1 (ENSONIG00000012000)	STRADB (ENSONIG00000011998)	TRAK2 (ENSONIG00000011992)	ENSONIG00000011987	nudt15 (ENSONIG00000030763)	cpo (ENSONIG00000011982)	cckbra (ENSONIG00000011971)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	29	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c.j	ENSGT00940000154242.a.c.i	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b.g	ENSGT00940000161508.b.h
Haplochromini	ANCESTRAL SPECIES	26	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c.j	ENSGT00940000154242.a.c.i	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b.g	ENSGT00940000161508.b.h.a.a
Burton s mouthbrooder	MODERN SPECIES	433	ENSHBUG00000015001	STEAP3 (ENSHBUG00000015018)	C1QL2 (ENSHBUG00000015065)	EN1 (ENSHBUG00000015070)	ENSHBUG00000015084	ENSHBUG00000015095	ENSHBUG00000015109	ENSHBUG00000015139	XKR6 (ENSHBUG00000015144)	enpp4 (ENSHBUG00000015154)	clic5a (ENSHBUG00000015180)	mgat5 (ENSHBUG00000015239) #13	TMEM163 (ENSHBUG00000015279) #15	ccnt2b (ENSHBUG00000015447) #17	ZRANB3 (ENSHBUG00000015687) #21	R3HDM1 (ENSHBUG00000015737) #22	ENSHBUG00000015755	rnd3a (ENSHBUG00000000464)	mmadhca (ENSHBUG00000015855)	lypd6 (ENSHBUG00000015866)	pspc1 (ENSHBUG00000001139)	FDX1 (ENSHBUG00000015882)	ENSHBUG00000015888	NBEAL1 (ENSHBUG00000016040)	STRADB (ENSHBUG00000016078)	TRAK2 (ENSHBUG00000016106)	ENSHBUG00000016122	ENSHBUG00000016146	nudt15 (ENSHBUG00000016152)	cpo (ENSHBUG00000016164)	cpo (ENSHBUG00000016220)
Haplochromini_A	ANCESTRAL SPECIES	29	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c.j	ENSGT00940000154242.a.c.i	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b.g	ENSGT00940000161508.b.h.a.a
Haplochromini_B	ANCESTRAL SPECIES	38	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.c.b	ENSGT00390000014037.d	ENSGT01030000234996	ENSGT00940000154242.a.c.j	ENSGT00940000154242.a.c.i	ENSGT00390000005345	ENSGT01070000253766.C.o.b	ENSGT00940000158831	ENSGT00940000156406.a	ENSGT00940000153470.a.a.a.a #13	ENSGT00390000001170.a.b #15	ENSGT00940000155759.e.b #17	ENSGT00940000158559 #21	ENSGT00940000156095.m.a #22	ENSGT01100000263596	ENSGT00940000157541.e	ENSGT00390000015050.`b.b	ENSGT00390000000220.B.d	ENSGT00940000157358	ENSGT00940000154633.id.b	ENSGT00940000156916	ENSGT00940000166048.a.b	ENSGT00940000155041.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000164538	ENSGT00390000003338	ENSGT00940000161508.b.g	ENSGT00940000161508.b.h.b
Zebra mbuna	MODERN SPECIES	1105	STEAP3 (ENSMZEG00005003771)	C1QL2 (ENSMZEG00005003725)	en1a (ENSMZEG00005003707)	ENSMZEG00005003681	ENSMZEG00005003670	ENSMZEG00005003631	ENSMZEG00005003617	ENSMZEG00005003600	ENSMZEG00005003587	enpp4 (ENSMZEG00005003578)	clic5a (ENSMZEG00005003553)	mgat5 (ENSMZEG00005003509) #13	TMEM163 (ENSMZEG00005003488) #15	ccnt2b (ENSMZEG00005003399) #17	ZRANB3 (ENSMZEG00005003316) #21	ENSMZEG00005003157 #22	ENSMZEG00005003122	rnd3a (ENSMZEG00005003087)	cckbra (ENSMZEG00005001905)	ENSMZEG00005001878	NALF1 (ENSMZEG00005001867)	lig4 (ENSMZEG00005001855)	irs2a (ENSMZEG00005001844)	acp2 (ENSMZEG00005001825)	gpr137c (ENSMZEG00005001770)	TXNDC16 (ENSMZEG00005001753)	ENSMZEG00005001740	ptger2a (ENSMZEG00005001734)	NID2 (ENSMZEG00005001685)	rtraf (ENSMZEG00005001641)	sap18 (ENSMZEG00005001627)
Eastern happy	MODERN SPECIES	14	DBI (ENSACLG00000027439)	STEAP3 (ENSACLG00000027437)	C1QL2 (ENSACLG00000027425)	EN1 (ENSACLG00000027418)	ENSACLG00000027410	ENSACLG00000027407	ENSACLG00000027399	ENSACLG00000027391	XKR6 (ENSACLG00000027384)	enpp4 (ENSACLG00000027378)	clic5a (ENSACLG00000027371)	mgat5 (ENSACLG00000027358) #13	TMEM163 (ENSACLG00000027348) #15	ENSACLG00000027342 #17	ENSACLG00000027313 #21	ENSACLG00000027282 #22	ENSACLG00000027278	rnd3a (ENSACLG00000027271)	mmadhca (ENSACLG00000027255)	ENSACLG00000027251	lypd6 (ENSACLG00000027245)	pspc1 (ENSACLG00000027220)	FDX1 (ENSACLG00000027217)	ENSACLG00000027214	NBEAL1 (ENSACLG00000027172)	STRADB (ENSACLG00000027159)	TRAK2 (ENSACLG00000027146)	ENSACLG00000027131	nudt15 (ENSACLG00000027121)	cpo (ENSACLG00000027115)	cpo (ENSACLG00000027083)
P. nyererei	MODERN SPECIES	389	ENSPNYG00000007922	STEAP3 (ENSPNYG00000007940)	C1QL2 (ENSPNYG00000007956)	EN1 (ENSPNYG00000008032)	ENSPNYG00000008104	ENSPNYG00000008175	ENSPNYG00000008218	ENSPNYG00000008282	XKR6 (ENSPNYG00000008326)	enpp4 (ENSPNYG00000008351)	clic5a (ENSPNYG00000008377)	mgat5 (ENSPNYG00000008406) #13	TMEM163 (ENSPNYG00000008449) #15	ccnt2b (ENSPNYG00000008506) #17	ZRANB3 (ENSPNYG00000008630) #21	ENSPNYG00000008701 #22	ENSPNYG00000008736	rnd3a (ENSPNYG00000008756)	mmadhca (ENSPNYG00000008804)	lypd6 (ENSPNYG00000008856)	pspc1 (ENSPNYG00000008893)	FDX1 (ENSPNYG00000008958)	ENSPNYG00000008973	NBEAL1 (ENSPNYG00000009041)	STRADB (ENSPNYG00000009290)	TRAK2 (ENSPNYG00000009328)	ENSPNYG00000009373	nudt15 (ENSPNYG00000009386)	cpo (ENSPNYG00000009400)	cpo (ENSPNYG00000009417)
Pinecone sodierfish	MODERN SPECIES	11	SATB2 (ENSMMDG00005005281)	CRYGS (ENSMMDG00005005263)	ENSMMDG00005005261	ENSMMDG00005004963	fam184aa (ENSMMDG00005004948)	PLN (ENSMMDG00005004940)	ENSMMDG00005004937	ENSMMDG00005004933	ENSMMDG00005004926	enpp4 (ENSMMDG00005004918)	clic5a (ENSMMDG00005004776)	mgat5 (ENSMMDG00005004763) #13	TMEM163 (ENSMMDG00005004755) #15	ccnt2b (ENSMMDG00005004749) #17	ENSMMDG00005004603 #21	ENSMMDG00005004544 #22	rnd3a (ENSMMDG00005004529)	mmadhca (ENSMMDG00005004519)	ENSMMDG00005004504	pspc1 (ENSMMDG00005004495)	ENSMMDG00005004478	ENSMMDG00005004462	ENSMMDG00005004453	NBEAL1 (ENSMMDG00005004407)	ENSMMDG00005003924	TRAK2 (ENSMMDG00005003175)	nudt15 (ENSMMDG00005003119)	cpo (ENSMMDG00005003099)	cckbra (ENSMMDG00005003078)	NALF1 (ENSMMDG00005003070)	lig4 (ENSMMDG00005003067)
Cod	MODERN SPECIES	17	ENSGMOG00000022776	cdpf1 (ENSGMOG00000000444)	ENSGMOG00000022506	ENSGMOG00000026120	ENSGMOG00000005934	ENSGMOG00000026138	atxn10 (ENSGMOG00000019268)	ENSGMOG00000025051	ENSGMOG00000026572	ENSGMOG00000023173	ENSGMOG00000029581	ENSGMOG00000028399	ENSGMOG00000034751	ENSGMOG00000002692 #21	ENSGMOG00000024185	ENSGMOG00000034693 #22	ENSGMOG00000032421	ENSGMOG00000033819 ##7	ENSGMOG00000033588	ENSGMOG00000035857	ENSGMOG00000032525	ENSGMOG00000036806	ENSGMOG00000026836	ENSGMOG00000033935	ENSGMOG00000024984	ENSGMOG00000032745	ENSGMOG00000003742	ENSGMOG00000003712	ENSGMOG00000026705	ENSGMOG00000033410	ENSGMOG00000025342
Clupeocephala	ANCESTRAL SPECIES	369									ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705 #19	ENSGT01030000240283	ENSGT00940000156095.m.b #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00940000154311.b	ENSGT00530000063686.a.a
Otomorpha	ANCESTRAL SPECIES	990															ENSGT01030000240283	ENSGT00940000156095.m.b #22
Otophysi	ANCESTRAL SPECIES	797															ENSGT01030000240283	ENSGT00940000156095.m.b #22
Characiphysae	ANCESTRAL SPECIES	107	ENSGT00940000160639.b.a.b.b.a	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383.e #18	ENSGT00940000158539.a	ENSGT00390000000220.A	ENSGT00390000000220.B.c.a	ENSGT00390000015050.`b.a	ENSGT00940000157541.f.a	ENSGT00940000157541.f.b	ENSGT00530000063686.a.a	ENSGT00940000165390.a	ENSGT00940000160205 #23	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b	ENSGT00730000111249.f	ENSGT00940000155868.f
Channel catfish	MODERN SPECIES	25	arl4ca (ENSIPUG00000002122)	tmem163a (ENSIPUG00000002114) #15	acmsd (ENSIPUG00000002076) #16	ccnt2a (ENSIPUG00000002060) #17	ENSIPUG00000002052 #18	KIF5C (ENSIPUG00000002020)	lypd6b (ENSIPUG00000002010)	Lypd6 (ENSIPUG00000001987)	mmadhcb (ENSIPUG00000001943)	rnd3b (ENSIPUG00000001926)	RND3 (ENSIPUG00000001902)	nmi (ENSIPUG00000001883)	ENSIPUG00000001876	UBXN4 (ENSIPUG00000001849) #23	rab3gap1 (ENSIPUG00000001801) #19	R3HDM1 (ENSIPUG00000001676) #22	epc2 (ENSIPUG00000001653)	acvr2aa (ENSIPUG00000001630)	zeb2a (ENSIPUG00000001605)	gtdc1 (ENSIPUG00000001575)	arhgap15 (ENSIPUG00000001559)	arglu1 (ENSIPUG00000001542)	efnb2a (ENSIPUG00000001518)	sec22a (ENSIPUG00000001444)	adcy5 (ENSIPUG00000001390)	PTPLB (ENSIPUG00000001338)	stam2 (ENSIPUG00000001294)	cacnb4a (ENSIPUG00000001244)	ENSIPUG00000001224	zgc:162396 (ENSIPUG00000001213)	ENSIPUG00000001199
Characiphysae_b	ANCESTRAL SPECIES	98	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383.e #18	ENSGT00940000160383.f #18	ENSGT00940000158539.a	ENSGT00390000000220.A	ENSGT00390000000220.B.c.a	ENSGT00390000015050.`b.a	ENSGT00940000157541.f.a	ENSGT00940000157541.f.b	ENSGT00530000063686.a.a	ENSGT00940000165390.a	ENSGT00940000160205 #23	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b	ENSGT00730000111249.f	ENSGT00940000155868.f
Characoidei	ANCESTRAL SPECIES	111	ENSGT00940000160639.b.b	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383.e #18	ENSGT00940000158539.a	ENSGT00390000000220.A	ENSGT00390000000220.B.c.a	ENSGT00390000015050.`b.a	ENSGT00940000157541.f.a	ENSGT00940000157541.f.b	ENSGT00530000063686.a.a	ENSGT00940000165390.a	ENSGT00940000160205 #23	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000158526	ENSGT00940000157233.d
Mexicana tetra	MODERN SPECIES	140															rab3gap1 (ENSAMXG00000012897) #19	R3HDM1 (ENSAMXG00000012861) #22	epc2 (ENSAMXG00000012850)	acvr2aa (ENSAMXG00000012841)
Red-bellied piranha	MODERN SPECIES	36	lypd6b (ENSPNAG00000028673)	lypd6 (ENSPNAG00000004795)	mmadhcb (ENSPNAG00000005431)	ENSPNAG00000005825	ENSPNAG00000028771	rnd3b (ENSPNAG00000028797)	ENSPNAG00000004443	RND3 (ENSPNAG00000006394)	NMI (ENSPNAG00000028870)	ENSPNAG00000006111	ENSPNAG00000028914	ENSPNAG00000005968	UBXN4 (ENSPNAG00000005435) #23	rab3gap1 (ENSPNAG00000029167) #19	ENSPNAG00000029180	R3HDM1 (ENSPNAG00000005436) #22
Electric eel	MODERN SPECIES	983																R3HDM1 (ENSEEEG00000020237) #22	NOS2 (ENSEEEG00000020232)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000156095.m.b #22
Cyprininae	ANCESTRAL SPECIES	698																ENSGT00940000156095.m.b #22	ENSGT00940000160136.p	ENSGT00940000173214	ENSGT00950000183097.a.a.b.f	ENSGT00950000183030.b	ENSGT00940000158977	ENSGT00940000154295	ENSGT00510000049213.b	ENSGT01090000259997.b.b.n	ENSGT00940000168612	ENSGT00940000153259.a.b.b	ENSGT00940000160405.i
Cyprininae_a	ANCESTRAL SPECIES	600																ENSGT00940000156095.m.b #22	ENSGT00940000160136.p	ENSGT00940000174938	ENSGT00950000183097.a.a.b.f	ENSGT00950000183030.b	ENSGT00940000158977	ENSGT00940000154295	ENSGT00510000049213.b	ENSGT00940000153259.a.b.b.e	ENSGT00940000160405.i
Common carp reference	MODERN SPECIES	41							ENSCCRG00000064941 ##7	ENSCCRG00000057438 ##7	actr3 (ENSCCRG00000079808) #8	ENSCCRG00000035471	ENSCCRG00000053984 #10	ENSCCRG00000035481	ENSCCRG00000035475	ENSCCRG00000015008	ENSCCRG00000068826 #19	ENSCCRG00000039395 #22	ENSCCRG00000053966	ENSCCRG00000082855	lcp1 (ENSCCRG00000027206)	TBC1D8 (ENSCCRG00000078121)	ENSCCRG00000075062	ENSCCRG00000064926	rpl31 (ENSCCRG00000069862)	edar (ENSCCRG00000001782)	SH3RF3 (ENSCCRG00000069092)	septin10 (ENSCCRG00000051072)	SOWAHC (ENSCCRG00000053706)	ENSCCRG00000075435	ENSCCRG00000064773	ENSCCRG00000045898	nlgn4xb (ENSCCRG00000076725)
Golden-line barbel	MODERN SPECIES	1782																R3HDM1 (ENSSGRG00000031051) #22	ENSSGRG00000031056	lcp1 (ENSSGRG00000031066)	cnot11 (ENSSGRG00000031488)
Goldfish	MODERN SPECIES	27	ENSCARG00000017049	ENSCARG00000016985	ENSCARG00000016960	ENSCARG00000016882	sestd1 (ENSCARG00000016790)	znf385b (ENSCARG00000016761)	ENSCARG00000016756	DPP10 (ENSCARG00000014284) ##7	actr3 (ENSCARG00000013924) #8	gpr39 (ENSCARG00000013883) #10	ENSCARG00000013881	ENSCARG00000013874	ENSCARG00000013865	UBXN4 (ENSCARG00000013842) #23	ENSCARG00000013837	ENSCARG00000013819 #22	ENSCARG00000013789	ENSCARG00000013774	lcp1 (ENSCARG00000012883)	rpl31 (ENSCARG00000012805)	ENSCARG00000012802	ENSCARG00000012284	PDCL3 (ENSCARG00000012230)	ENSCARG00000012224	edar (ENSCARG00000068288)	SH3RF3 (ENSCARG00000068244)	septin10 (ENSCARG00000067807)	SOWAHC (ENSCARG00000067767)	ADARB1 (ENSCARG00000067744)	agr1 (ENSCARG00000067731)	traf3ip1 (ENSCARG00000067719)
Clupeiformes	ANCESTRAL SPECIES	351										ENSGT00390000001170.b #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000162599	ENSGT00940000160342.e	ENSGT00470000042284	ENSGT00940000155792	ENSGT01050000244956.b.w.a	ENSGT00530000063609.a	ENSGT00940000158407	ENSGT00390000008096.B.e.a
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000022505	ENSCHAG00000022487	cops8 (ENSCHAG00000022460)	COL6A3 (ENSCHAG00000021630)	ENSCHAG00000021404	ENSCHAG00000021392	ENSCHAG00000021378	ENSCHAG00000021353	ENSCHAG00000021338	TMEM163 (ENSCHAG00000021288) #15	acmsd (ENSCHAG00000021218) #16	ccnt2a (ENSCHAG00000021198) #17	ENSCHAG00000021185 #18	ENSCHAG00000021132	rab3gap1 (ENSCHAG00000020953) #19	R3HDM1 (ENSCHAG00000020911) #22	lcmt2 (ENSCHAG00000020653)	crygs2 (ENSCHAG00000020631)	tbccd1 (ENSCHAG00000020624)	dnajb11 (ENSCHAG00000020348)	mob4 (ENSCHAG00000020331)	rftn2 (ENSCHAG00000020284)	PLCL1 (ENSCHAG00000020263)	satb2 (ENSCHAG00000020238)	hspe1 (ENSCHAG00000020182)	HSPD1 (ENSCHAG00000020147)	coq10b (ENSCHAG00000020124)	SF3B1 (ENSCHAG00000019458)	ANKRD44 (ENSCHAG00000017049)	pikfyve (ENSCHAG00000012619)	ENSCHAG00000012479
Euteleosteomorpha	ANCESTRAL SPECIES	29	ENSGT00940000163794	ENSGT00940000165586.a	ENSGT00940000154349	ENSGT00940000159224.a	ENSGT00940000156332	ENSGT00940000157211.l	ENSGT00390000010354	ENSGT00940000156353.u.a	ENSGT00940000159094.f	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c	ENSGT00940000157541.f.d	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b
Acanthomorphata	ANCESTRAL SPECIES	51															ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c	ENSGT00940000157541.f.d	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	113															ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c	ENSGT00940000157541.f.d	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b	ENSGT00940000181338
Pinecone sodierfish	MODERN SPECIES	13	gtpbp8 (ENSMMDG00005014112)	slc10a2 (ENSMMDG00005014105)	inhbb (ENSMMDG00005014090)	gli2a (ENSMMDG00005014085)	ENSMMDG00005014082	ENSMMDG00005014080	tfcp2l1 (ENSMMDG00005014079)	clasp1a (ENSMMDG00005013471)	nifk (ENSMMDG00005013436)	ENSMMDG00005013433	fhip1b (ENSMMDG00005013219)	CNGA4 (ENSMMDG00005013202)	TRAPPC10 (ENSMMDG00005012522)	ENSMMDG00005012507	rab3gap1 (ENSMMDG00005011588) #19	R3HDM1 (ENSMMDG00005011316) #22	UBXN4 (ENSMMDG00005011306) #23	ENSMMDG00005011302	ENSMMDG00005011298	rnd3b (ENSMMDG00005011291)	rnd3b (ENSMMDG00005011278)	mmadhcb (ENSMMDG00005011275)	LYPD6 (ENSMMDG00005011272)	lypd6b (ENSMMDG00005011268)	ENSMMDG00005011265	ENSMMDG00005011260	ENSMMDG00005011255	KIF5C (ENSMMDG00005011244)	epc2 (ENSMMDG00005011233)	acvr2aa (ENSMMDG00005011102)	zeb2a (ENSMMDG00005011016)
Cod	MODERN SPECIES	12	ENSGMOG00000013967	ENSGMOG00000013984	ENSGMOG00000012727	ENSGMOG00000012733	CHPF (ENSGMOG00000012737)	asic4a (ENSGMOG00000012740)	ENSGMOG00000012752	gmppaa (ENSGMOG00000012792)	ENSGMOG00000019956	ENSGMOG00000001491	ENSGMOG00000001477	ENSGMOG00000001333 ##37	ENSGMOG00000003578	ENSGMOG00000003590	ENSGMOG00000003612 #19	ENSGMOG00000006042 #22	ENSGMOG00000000660 #23	ENSGMOG00000023772	ENSGMOG00000028916	ENSGMOG00000034621	ENSGMOG00000011217	ENSGMOG00000011231	ENSGMOG00000011207	RND3 (ENSGMOG00000011197)	rnd3b (ENSGMOG00000026348)	MMADHC (ENSGMOG00000011181)	LYPD6 (ENSGMOG00000034422)	LYPD6B (ENSGMOG00000025667)	KIF5C (ENSGMOG00000011375)	epc2 (ENSGMOG00000013936)	ENSGMOG00000013896
Protacanthopterygii	ANCESTRAL SPECIES	18	ENSGT00940000163794	ENSGT00940000165586.a	ENSGT00940000154349	ENSGT00940000159224.a	ENSGT00940000156332	ENSGT00940000157211.l	ENSGT00390000010354	ENSGT00940000156353.u.a	ENSGT00940000159094.f	ENSGT00390000001170.a.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705 #19	ENSGT00940000156095.m.b #22	ENSGT00940000160205 #23	ENSGT00940000165390.a	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c	ENSGT00940000157541.f.d	ENSGT00390000015050.`b.a	ENSGT00390000000220.B.c.b	ENSGT00390000000220.A	ENSGT00940000158539.a.e	ENSGT00940000158526	ENSGT00940000157233.d	ENSGT00950000183208.A.c.b	ENSGT00390000006631	ENSGT00950000182860.a.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	7	ENSGT00940000178681.b	ENSGT00940000163794	ENSGT00940000165586.a.b	ENSGT00940000154349.c.a	ENSGT00940000159224.a.a.b	ENSGT00940000156332.q	ENSGT00940000157211.l.a	ENSGT00390000010354.c	ENSGT00940000156353.u.a.a	ENSGT00940000159094.f.a	ENSGT00390000001170.a.a.d.a #15	ENSGT00940000155759.e.a.b #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705.g #19	ENSGT00940000156095.m.b.a #22	ENSGT00940000160205.c #23	ENSGT00940000165390.a.k	ENSGT00940000157541.f.c.b	ENSGT00940000157541.f.d.c	ENSGT00390000015050.`b.a.e	ENSGT00390000000220.B.c.b.a	ENSGT00390000000220.A.c	ENSGT00940000158539.a.e	ENSGT00940000158526.s	ENSGT00530000064137.a.b.u.a	ENSGT00940000157233.d.g	ENSGT00950000183208.A.c.b.e	ENSGT00390000006631	ENSGT00950000182860.a.b.b.c	ENSGT00940000160639.b.a.b.b.b.a
Huchen	MODERN SPECIES	298											ENSHHUG00000013926 #15	ccnt2a (ENSHHUG00000013919) #17	ENSHHUG00000013872 #18	ENSHHUG00000013868	rab3gap1 (ENSHHUG00000013783) #19	R3HDM1 (ENSHHUG00000013711) #22	UBXN4 (ENSHHUG00000013687) #23	ENSHHUG00000013682	ENSHHUG00000013683	RND3 (ENSHHUG00000013670)	rnd3b (ENSHHUG00000013649)	mmadhcb (ENSHHUG00000013635)	LYPD6 (ENSHHUG00000013630)	lypd6b (ENSHHUG00000013621)	KIF5C (ENSHHUG00000013341)	epc2 (ENSHHUG00000013333)	MBD5 (ENSHHUG00000013301)	acvr2aa (ENSHHUG00000013059)
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000178681.a.a	ENSGT00940000163794	ENSGT00940000165586.a.b	ENSGT00940000154349.c.a	ENSGT00940000159224.a.a.b	ENSGT00940000156332.q	ENSGT00940000157211.l.a	ENSGT00390000010354.c	ENSGT00940000156353.u.a.a	ENSGT00940000159094.f.a	ENSGT00390000001170.a.a.d.a #15	ENSGT00940000155759.e.a.b #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705.g #19	ENSGT00940000156095.m.b.a #22	ENSGT00940000160205.c #23	ENSGT00940000165390.a.k	ENSGT00940000157541.f.c.b	ENSGT00940000157541.f.d.c	ENSGT00390000015050.`b.a.e	ENSGT00390000000220.B.c.b.a	ENSGT00390000000220.A.c	ENSGT00940000158539.a.e	ENSGT00940000158526.s	ENSGT00530000064137.a.b.u.a	ENSGT00940000157233.d.g	ENSGT00950000183208.A.c.b.e	ENSGT00390000006631	ENSGT00950000182860.a.b.b.c	ENSGT00940000160639.b.a.b.b.b.a
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000178681.a.a	ENSGT00940000163794	ENSGT00940000165586.a.b	ENSGT00940000154349.c.a	ENSGT00940000159224.a.a.b	ENSGT00940000156332.q	ENSGT00940000157211.l.a	ENSGT01000000221562	ENSGT00940000156353.u.a.a	ENSGT00940000159094.f.a	ENSGT00390000001170.a.a.d.a #15	ENSGT00940000155759.e.a.b #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705.g #19	ENSGT00940000156095.m.b.a #22	ENSGT00940000160205.c #23	ENSGT00940000165390.a.k	ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a	ENSGT00940000157541.f.c.b	ENSGT00940000157541.f.d.c	ENSGT00390000015050.`b.a.e	ENSGT00390000000220.B.c.b.a	ENSGT00390000000220.A.c	ENSGT00940000158539.a.e	ENSGT00940000158526.s	ENSGT00530000064137.a.b.u.a	ENSGT00940000157233.d.g	ENSGT00950000183208.A.c.b.e	ENSGT00390000006631	ENSGT00950000182860.a.b.b.c
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000061607	ENSOMYG00000015542	ENSOMYG00000053831	ramp1 (ENSOMYG00000015533)	ptpn4a (ENSOMYG00000015383)	ENSOMYG00000015343	ENSOMYG00000074564	ENSOMYG00000015337	ENSOMYG00000067741	pth2ra (ENSOMYG00000013458)	tmem163a (ENSOMYG00000013166) #15	CCNT2 (ENSOMYG00000013118) #17	ENSOMYG00000013106 #18	ENSOMYG00000013082	RAB3GAP1 (ENSOMYG00000010724) #19	R3HDM1 (ENSOMYG00000006736) #22	UBXN4 (ENSOMYG00000006585) #23	ENSOMYG00000006412	ENSOMYG00000006220	RND3 (ENSOMYG00000006168)	rnd3b (ENSOMYG00000006108)	MMADHC (ENSOMYG00000006042)	LYPD6 (ENSOMYG00000005970)	lypd6b (ENSOMYG00000005960)	KIF5C (ENSOMYG00000005533)	epc2 (ENSOMYG00000004870)	MBD5 (ENSOMYG00000004808)	acvr2aa (ENSOMYG00000004736)	ENSOMYG00000030635	zeb2a (ENSOMYG00000004579)	gtdc1 (ENSOMYG00000004521)
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000178681.b	ENSGT00940000163794	ENSGT00940000165586.a.b	ENSGT00940000154349.c.a	ENSGT00940000159224.a.a.b	ENSGT00940000156332.q	ENSGT00940000157211.l.a	ENSGT01000000221562	ENSGT00940000156353.u.a.a	ENSGT00940000159094.f.a	ENSGT00390000001170.a.a.d.a #15	ENSGT00940000155759.e.a.b #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d.a	ENSGT00390000006705.g #19	ENSGT00940000156095.m.b.a #22	ENSGT00940000160205.c #23	ENSGT00940000165390.a.k	ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a	ENSGT00940000157541.f.c.b	ENSGT00940000157541.f.d.c	ENSGT00390000015050.`b.a.e	ENSGT00390000000220.B.c.b.a	ENSGT00390000000220.A.c	ENSGT00940000158539.a.e	ENSGT00940000158526.s	ENSGT00530000064137.a.b.u.a	ENSGT00940000157233.d.g	ENSGT00950000183208.A.c.b.e	ENSGT00390000006631	ENSGT00950000182860.a.b.b.c
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005014748	ENSOTSG00005014747	zgc:162780 (ENSOTSG00005014746)	zgc:162396 (ENSOTSG00005014732)	ube2f (ENSOTSG00005014729)	ramp1 (ENSOTSG00005014727)	epb41l5 (ENSOTSG00005014721)	ptpn4a (ENSOTSG00005014710)	MRAS (ENSOTSG00005014704)	pth2ra (ENSOTSG00005014702)	tmem163a (ENSOTSG00005014699) #15	ccnt2a (ENSOTSG00005014680) #17	ENSOTSG00005014676 #18	ENSOTSG00005014674	rab3gap1 (ENSOTSG00005011394) #19	R3HDM1 (ENSOTSG00005011386) #22	ubxn4 (ENSOTSG00005011381)	RND3 (ENSOTSG00005011379)	rnd3b (ENSOTSG00005011378)	mmadhcb (ENSOTSG00005011375)	LYPD6 (ENSOTSG00005011371)	lypd6b (ENSOTSG00005011368)	KIF5C (ENSOTSG00005011365)	ENSOTSG00005011347	acvr2aa (ENSOTSG00005010288)	zeb2a (ENSOTSG00005010263)	gtdc1 (ENSOTSG00005010262)	arhgap15 (ENSOTSG00005010259)	ADPRH (ENSOTSG00005010248)	ARL4C (ENSOTSG00005010246)	sh3bp4 (ENSOTSG00005010245)
Coho salmon	MODERN SPECIES	11	ENSOKIG00005048806	zgc:162396 (ENSOKIG00005048801)	zgc:162396 (ENSOKIG00005048773)	UBE2F (ENSOKIG00005048755)	ramp1 (ENSOKIG00005048750)	epb41l5 (ENSOKIG00005048712)	ptpn4a (ENSOKIG00005048629)	ENSOKIG00005048615	MRAS (ENSOKIG00005048612)	pth2ra (ENSOKIG00005048295)	tmem163a (ENSOKIG00005048250) #15	ccnt2a (ENSOKIG00005048237) #17	ENSOKIG00005048227 #18	ENSOKIG00005048220	rab3gap1 (ENSOKIG00005047115) #19	R3HDM1 (ENSOKIG00005047043) #22	UBXN4 (ENSOKIG00005047036) #23	ENSOKIG00005047027	ENSOKIG00005047017	rnd3b (ENSOKIG00005047005)	rnd3b (ENSOKIG00005046975)	mmadhcb (ENSOKIG00005046956)	LYPD6 (ENSOKIG00005046950)	lypd6b (ENSOKIG00005046945)	KIF5C (ENSOKIG00005046928)	epc2 (ENSOKIG00005046899)	MBD5 (ENSOKIG00005046883)	acvr2aa (ENSOKIG00005046477)	zeb2a (ENSOKIG00005046434)	gtdc1 (ENSOKIG00005046420)	arhgap15 (ENSOKIG00005046394)
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000155235.k.a.c	ENSGT00940000178681.a.a	ENSGT00940000163794	ENSGT00940000154349.c.a	ENSGT00940000159224.a.a.b	ENSGT00940000156332.q	ENSGT00940000157211.l.a	ENSGT00390000010354.c	ENSGT00940000156353.u.a.a	ENSGT00940000159094.f.a	ENSGT00390000001170.a.a.d.a #15	ENSGT00940000155759.e.a.b #17	ENSGT00940000160383 #18	ENSGT01030000234607.A.a.a.a.d	ENSGT00390000006705.g #19	ENSGT00940000156095.m.b.a #22	ENSGT00940000160205.c #23	ENSGT00940000165390.a.k	ENSGT00940000157541.f.c.b	ENSGT00940000157541.f.d.c	ENSGT00390000015050.`b.a.e	ENSGT00390000000220.B.c.b.a	ENSGT00390000000220.A.c	ENSGT00940000158539.a.e	ENSGT00940000158526.s	ENSGT00530000064137.a.b.u.a	ENSGT00940000157233.d.g	ENSGT00950000183208.A.c.b.e	ENSGT00390000006631	ENSGT00950000182860.a.b.b.c	ENSGT00940000160639.b.a.b.b.b.a
Atlantic salmon	MODERN SPECIES	17	zgc:162396 (ENSSSAG00000102136)	zgc:162396 (ENSSSAG00000048731)	Y3374 (ENSSSAG00000048703)	ube2f (ENSSSAG00000048635)	ramp1 (ENSSSAG00000048622)	epb41l5 (ENSSSAG00000048574)	ptpn4a (ENSSSAG00000046847)	tmem177 (ENSSSAG00000046807)	ENSSSAG00000046799	pth2ra (ENSSSAG00000046672)	ENSSSAG00000046636 #15	ENSSSAG00000046447 #18	ccnt2a (ENSSSAG00000046498) #17	ENSSSAG00000046434	RAB3GAP1 (ENSSSAG00000046103) #19	R3HDM1 (ENSSSAG00000045633) #22	UBXN4 (ENSSSAG00000113024) #23	ENSSSAG00000081672	RND3 (ENSSSAG00000120060)	ENSSSAG00000113399	CB025 (ENSSSAG00000081667)	LYPD6 (ENSSSAG00000106558)	KIF5C (ENSSSAG00000081647)	epc2 (ENSSSAG00000081641)	MBD5 (ENSSSAG00000081639)	acvr2aa (ENSSSAG00000081630)	zeb2a (ENSSSAG00000081619)	gtdc1 (ENSSSAG00000081613)	RHG15 (ENSSSAG00000081610)	adprh (ENSSSAG00000081606)	ENSSSAG00000102975
River trout	MODERN SPECIES	16	creb1b (ENSSTUG00000010469)	klf7b (ENSSTUG00000010461)	zgc:162396 (ENSSTUG00000010404)	ube2f (ENSSTUG00000010326)	ramp1 (ENSSTUG00000010313)	epb41l5 (ENSSTUG00000010250)	ptpn4a (ENSSTUG00000010013)	tmem177 (ENSSTUG00000009990)	MRAS (ENSSTUG00000009970)	pth2ra (ENSSTUG00000009752)	tmem163a (ENSSTUG00000009717) #15	ccnt2a (ENSSTUG00000009693) #17	ENSSTUG00000009678 #18	ENSSTUG00000009662	rab3gap1 (ENSSTUG00000007748) #19	R3HDM1 (ENSSTUG00000007546) #22	UBXN4 (ENSSTUG00000007495) #23	ENSSTUG00000007463	RND3 (ENSSTUG00000007449)	rnd3b (ENSSTUG00000007411)	mmadhcb (ENSSTUG00000007371)	LYPD6 (ENSSTUG00000007362)	lypd6b (ENSSTUG00000007354)	KIF5C (ENSSTUG00000006973)	epc2 (ENSSTUG00000006897)	MBD5 (ENSSTUG00000006873)	acvr2aa (ENSSTUG00000006425)	zeb2a (ENSSTUG00000006336)	gtdc1 (ENSSTUG00000006293)	arhgap15 (ENSSTUG00000006192)	ADPRH (ENSSTUG00000006167)
Salmoninae	ANCESTRAL SPECIES	501		ENSGT00940000178681.a.b	ENSGT00940000165586.a.a	ENSGT00940000154349.c.b	ENSGT00940000159224.a.a.a	ENSGT00940000159224.a.b	ENSGT00940000156332.r	ENSGT00940000157211.l.b	ENSGT00390000010354.d	ENSGT00940000156353.u.a.b	ENSGT00940000159094.f.b	ENSGT00390000001170.a.a.c #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a.a #17	ENSGT00390000006705.h #19	ENSGT00940000156095.m.b.b #22	ENSGT00940000160205.d #23	ENSGT00940000165390.a.l	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c.a
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000155408.o.a.f	ENSGT00940000155235.k.a.d	ENSGT00940000178681.a.b	ENSGT00940000165586.a.a	ENSGT00940000154349.c.b	ENSGT00940000159224.a.a.a	ENSGT00940000156332.r	ENSGT00940000157211.l.b	ENSGT00390000010354.d	ENSGT00940000156353.u.a.b	ENSGT00940000159094.f.b	ENSGT00390000001170.a.a.d.b.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a.a #17	ENSGT00390000006705.h #19	ENSGT00940000156095.m.b.b #22	ENSGT00940000160205.d #23	ENSGT00940000165390.a.l	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c.a	ENSGT00940000157541.f.d.d	ENSGT00390000015050.`b.a.f	ENSGT00390000000220.B.c.b.b	ENSGT00390000000220.A.d	ENSGT00940000158526.t	ENSGT00530000064137.a.b.u.b	ENSGT00940000157233.d.h	ENSGT00950000183208.A.c.b.f	ENSGT00950000182860.a.b.b.d	ENSGT00940000166921.a
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000155235.k.a.d	ENSGT00940000178681.a.b	ENSGT00940000165586.a.a	ENSGT00940000154349.c.b	ENSGT00940000159224.a.a.a	ENSGT00940000159224.a.b	ENSGT00940000156332.r	ENSGT00940000157211.l.b	ENSGT00390000010354.d	ENSGT00940000156353.u.a.b	ENSGT00940000159094.f.b	ENSGT00390000001170.a.a.d.b.a #15	ENSGT00490000043417.f #16	ENSGT00940000155759.e.a.a #17	ENSGT00390000006705.h #19	ENSGT00940000156095.m.b.b #22	ENSGT00940000160205.d #23	ENSGT00940000165390.a.l	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c.a	ENSGT00940000157541.f.d.d	ENSGT00390000015050.`b.a.f	ENSGT00390000000220.B.c.b.b	ENSGT00390000000220.A.d	ENSGT00940000158526.t	ENSGT00530000064137.a.b.u.b	ENSGT00940000157233.d.h	ENSGT00950000183208.A.c.b.f	ENSGT00950000182860.a.b.b.d	ENSGT00940000166921.a	ENSGT00940000160639.b.a.b.b.b.b.c
Rainbow trout	MODERN SPECIES	14	zgc:162780 (ENSOMYG00000022420)	ube2f (ENSOMYG00000022455)	ramp1 (ENSOMYG00000022499)	ENSOMYG00000077770	epb41l5 (ENSOMYG00000022561)	ptpn4a (ENSOMYG00000022591)	tmem177 (ENSOMYG00000022629)	ENSOMYG00000022634	pth2ra (ENSOMYG00000022669)	ENSOMYG00000056305	tmem163a (ENSOMYG00000054933) #15	ENSOMYG00000076179	acmsd (ENSOMYG00000022727) #16	ccnt2a (ENSOMYG00000022903) #17	RAB3GAP1 (ENSOMYG00000023855) #19	ENSOMYG00000024045 #22	ENSOMYG00000024209	ENSOMYG00000024282	NMI (ENSOMYG00000024338)	RND3 (ENSOMYG00000024351)	rnd3b (ENSOMYG00000024432)	MMADHC (ENSOMYG00000024468)	LYPD6 (ENSOMYG00000024481)	LYPD6B (ENSOMYG00000024505)	ENSOMYG00000048707	epc2 (ENSOMYG00000024755)	ENSOMYG00000025244	ENSOMYG00000025274	acvr2aa (ENSOMYG00000025406)	ENSOMYG00000072394	ENSOMYG00000060224
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000154453.a.b.a.a.a.a	ENSGT00940000155408.o.a.f	ENSGT00940000155235.k.a.d	ENSGT00940000178681.a.b	ENSGT00940000165586.a.a	ENSGT00940000154349.c.b	ENSGT00940000159224.a.b	ENSGT00940000156332.r	ENSGT00940000157211.l.b	ENSGT00390000010354.d	ENSGT00940000156353.u.a.b	ENSGT00940000159094.f.b	ENSGT00390000001170.a.a.d.b.a #15	ENSGT00490000043417.f #16	ENSGT00940000155759.e.a.a #17	ENSGT00940000156095.m.b.b #22	ENSGT00940000160205.d #23	ENSGT00940000165390.a.l	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c.a	ENSGT00940000157541.f.d.d	ENSGT00390000015050.`b.a.f	ENSGT00390000000220.B.c.b.b	ENSGT00390000000220.A.d	ENSGT00940000158526.t	ENSGT00530000064137.a.b.u.b	ENSGT00940000157233.d.h	ENSGT00950000183208.A.c.b.f	ENSGT00950000182860.a.b.b.d	ENSGT00940000166921.a	ENSGT00940000160639.b.a.b.b.b.b.c
Coho salmon	MODERN SPECIES	18	creb1b (ENSOKIG00005024554)	klf7b (ENSOKIG00005024600)	ENSOKIG00005024623	ENSOKIG00005024634	zgc:162780 (ENSOKIG00005024648)	ube2f (ENSOKIG00005024682)	epb41l5 (ENSOKIG00005024768)	ptpn4a (ENSOKIG00005024895)	tmem177 (ENSOKIG00005025174)	MRAS (ENSOKIG00005025188)	ENSOKIG00005025223	pth2ra (ENSOKIG00005025342)	tmem163a (ENSOKIG00005026171) #15	acmsd (ENSOKIG00005026186) #16	ccnt2a (ENSOKIG00005026326) #17	R3HDM1 (ENSOKIG00005027587) #22	UBXN4 (ENSOKIG00005027938) #23	ENSOKIG00005028009	NMI (ENSOKIG00005028048)	RND3 (ENSOKIG00005028077)	rnd3b (ENSOKIG00005028093)	MMADHC (ENSOKIG00005028095)	LYPD6 (ENSOKIG00005028106)	lypd6b (ENSOKIG00005028112)	epc2 (ENSOKIG00005028162)	ENSOKIG00005029006	acvr2aa (ENSOKIG00005029043)	ENSOKIG00005029214	zeb2a (ENSOKIG00005029225)	ENSOKIG00005029292	ENSOKIG00005029303
Chinook salmon	MODERN SPECIES	18	fzd5 (ENSOTSG00005047360)	ccnyl1 (ENSOTSG00005047361)	creb1b (ENSOTSG00005047367)	ENSOTSG00005047371	zgc:162780 (ENSOTSG00005047373)	ube2f (ENSOTSG00005047377)	ramp1 (ENSOTSG00005015728)	epb41l5 (ENSOTSG00005015993)	ptpn4a (ENSOTSG00005016024)	tmem177 (ENSOTSG00005016029)	MRAS (ENSOTSG00005016034)	pth2ra (ENSOTSG00005016041)	tmem163a (ENSOTSG00005016062) #15	acmsd (ENSOTSG00005016089) #16	ccnt2a (ENSOTSG00005016099) #17	R3HDM1 (ENSOTSG00005016395) #22	UBXN4 (ENSOTSG00005016473) #23	ENSOTSG00005016515	NMI (ENSOTSG00005016516)	RND3 (ENSOTSG00005016521)	rnd3b (ENSOTSG00005016522)	mmadhcb (ENSOTSG00005016523)	LYPD6 (ENSOTSG00005016524)	lypd6b (ENSOTSG00005016525)	ENSOTSG00005016567	epc2 (ENSOTSG00005016572)	ENSOTSG00005016802	acvr2aa (ENSOTSG00005016807)	ENSOTSG00005016852	ENSOTSG00005016853	zeb2a (ENSOTSG00005016854)
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000155408.o.a.f	ENSGT00940000155235.k.a.d	ENSGT00940000178681.a.b	ENSGT00940000165586.a.a	ENSGT00940000154349.c.b	ENSGT00940000159224.a.a.a	ENSGT00940000156332.r	ENSGT00940000157211.l.b	ENSGT00390000010354.d	ENSGT00940000156353.u.a.b	ENSGT00940000159094.f.b	ENSGT00390000001170.a.a.d.b.a #15	ENSGT00490000043417 #16	ENSGT00940000155759.e.a.a #17	ENSGT00390000006705.h #19	ENSGT00940000156095.m.b.b #22	ENSGT00940000160205.d #23	ENSGT00940000165390.a.l	ENSGT00940000154311.b	ENSGT00530000063686.a.a	ENSGT00940000157541.f.c.a	ENSGT00940000157541.f.d.d	ENSGT00390000015050.`b.a.f	ENSGT00390000000220.B.c.b.b	ENSGT00390000000220.A.d	ENSGT00940000158526.t	ENSGT00530000064137.a.b.u.b	ENSGT00940000157233.d.h	ENSGT00950000183208.A.c.b.f	ENSGT00950000182860.a.b.b.d	ENSGT00940000166921.a
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000119082	epb41l5 (ENSSSAG00000053983)	ENSSSAG00000088206	ptpn4a (ENSSSAG00000054717)	ENSSSAG00000097543	tmem177 (ENSSSAG00000055993)	ENSSSAG00000083373	pth2ra (ENSSSAG00000056014)	ENSSSAG00000048219	tmem163a (ENSSSAG00000056075) #15	acmsd (ENSSSAG00000056085) #16	ENSSSAG00000102085	ccnt2a (ENSSSAG00000056134) #17	RAB3GAP1 (ENSSSAG00000057384) #19	ENSSSAG00000086017	r3hdm1 (ENSSSAG00000057435) #22	ubxn4 (ENSSSAG00000081673) #23	ENSSSAG00000057802	ENSSSAG00000057832	RND3 (ENSSSAG00000057846)	rnd3b (ENSSSAG00000057861)	MMADHC (ENSSSAG00000057873)	LYPD6 (ENSSSAG00000057885)	LYPD6B (ENSSSAG00000117020)	epc2 (ENSSSAG00000057918)	ENSSSAG00000058136	ACVR2A (ENSSSAG00000058221)	ENSSSAG00000116492	zeb2a (ENSSSAG00000063282)	ENSSSAG00000104017	ENSSSAG00000121595
River trout	MODERN SPECIES	12	ENSSTUG00000009931	zgc:162780 (ENSSTUG00000009925)	ube2f (ENSSTUG00000009893)	ramp1 (ENSSTUG00000009887)	epb41l5 (ENSSTUG00000009747)	ptpn4a (ENSSTUG00000009601)	tmem177 (ENSSTUG00000009587)	MRAS (ENSSTUG00000009578)	ENSSTUG00000009573	pth2ra (ENSSTUG00000009522)	tmem163a (ENSSTUG00000009488) #15	acmsd (ENSSTUG00000009455) #16	ccnt2a (ENSSTUG00000008835) #17	ENSSTUG00000008815	rab3gap1 (ENSSTUG00000008774) #19	R3HDM1 (ENSSTUG00000008585) #22	UBXN4 (ENSSTUG00000008518) #23	ENSSTUG00000008509	ENSSTUG00000008483	ENSSTUG00000008475	rnd3b (ENSSTUG00000008458)	rnd3b (ENSSTUG00000008422)	mmadhcb (ENSSTUG00000008410)	LYPD6 (ENSSTUG00000008403)	lypd6b (ENSSTUG00000008381)	epc2 (ENSSTUG00000008327)	ENSSTUG00000008313	acvr2aa (ENSSTUG00000007939)	zeb2a (ENSSTUG00000007798)	arhgap15 (ENSSTUG00000007723)	ENSSTUG00000007661
Huchen	MODERN SPECIES	4425																R3HDM1 (ENSHHUG00000044506) #22	UBXN4 (ENSHHUG00000044468) #23	ENSHHUG00000044427	ENSHHUG00000044426
Northern pike	MODERN SPECIES	15	ENSELUG00000026268	zgc:162396 (ENSELUG00000005372)	zgc:162780 (ENSELUG00000005357)	ube2f (ENSELUG00000005321)	ramp1 (ENSELUG00000005272)	epb41l5 (ENSELUG00000005243)	ptpn4a (ENSELUG00000005149)	tmem177 (ENSELUG00000005098)	MRAS (ENSELUG00000005090)	pth2ra (ENSELUG00000005063)	tmem163a (ENSELUG00000000142) #15	acmsd (ENSELUG00000005010) #16	ccnt2a (ENSELUG00000004981) #17	ENSELUG00000004966 #18	rab3gap1 (ENSELUG00000004956) #19	R3HDM1 (ENSELUG00000004909) #22	UBXN4 (ENSELUG00000004855) #23	ENSELUG00000004826	ENSELUG00000004778	rnd3b (ENSELUG00000004762)	rnd3b (ENSELUG00000004752)	mmadhcb (ENSELUG00000004743)	LYPD6 (ENSELUG00000025460)	lypd6b (ENSELUG00000004706)	KIF5C (ENSELUG00000004683)	epc2 (ENSELUG00000004633)	MBD5 (ENSELUG00000004605)	acvr2aa (ENSELUG00000004570)	zeb2a (ENSELUG00000004545)	ENSELUG00000027327	gtdc1 (ENSELUG00000004515)
Clupeocephala	ANCESTRAL SPECIES	219							ENSGT00940000172951	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00940000155462.ab	ENSGT00390000018883	ENSGT00950000182962.b.a
Otomorpha	ANCESTRAL SPECIES	241						ENSGT00940000163923	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00940000157554	ENSGT00390000018883	ENSGT00390000002881
Otophysi	ANCESTRAL SPECIES	39	ENSGT00530000063760.b.g.b	ENSGT00550000075028	ENSGT00940000162345.c.b	ENSGT00940000163854.a.b	ENSGT00390000000698	ENSGT00940000163923	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476.j	ENSGT00940000159476.i	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00940000157554	ENSGT00390000018883
Characiphysae	ANCESTRAL SPECIES	10	ENSGT00550000075028	ENSGT00940000162345.c.b	ENSGT00940000163854.a.b	ENSGT00390000000698	ENSGT00940000164843.b	ENSGT00940000163923	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476.j	ENSGT00940000159476.i	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00940000157554	ENSGT00390000018883
Channel catfish	MODERN SPECIES	16	plekho1a (ENSIPUG00000021268)	vps45 (ENSIPUG00000021211)	zgc:153441 (ENSIPUG00000021200)	pogza (ENSIPUG00000021181)	psmb4 (ENSIPUG00000021163)	ENSIPUG00000021152	si:dkey-228a15.1 (ENSIPUG00000021138)	sytl1 (ENSIPUG00000021122)	fkbp9 (ENSIPUG00000021107)	CRTAP (ENSIPUG00000021081)	susd5 (ENSIPUG00000021074)	fbxl2 (ENSIPUG00000021044)	clasp2 (ENSIPUG00000020723)	ubp1 (ENSIPUG00000020657)	pdcd6ip (ENSIPUG00000020591)	ENSIPUG00000020552 #22	cyhr1 (ENSIPUG00000020546)	ENSIPUG00000020535	ENSIPUG00000020530	fabp3 (ENSIPUG00000020525)	zcchc17 (ENSIPUG00000020511)	snrnp40 (ENSIPUG00000020472)	nkain1 (ENSIPUG00000020456)	pum1 (ENSIPUG00000020421)	sdc3 (ENSIPUG00000020392)	nobox (ENSIPUG00000020371)	LAPTM4A (ENSIPUG00000020348)	matn1 (ENSIPUG00000020337)	sesn2 (ENSIPUG00000020323)	fgr (ENSIPUG00000020219)	ahdc1 (ENSIPUG00000020214)
Characiphysae_b	ANCESTRAL SPECIES	1	ENSGT00550000075028	ENSGT00940000162345.c.b	ENSGT00940000163854.a.b	ENSGT00390000000698	ENSGT00940000164843.b	ENSGT00940000163923	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476.j	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a	ENSGT00940000177340
Electric eel	MODERN SPECIES	37														ubp1 (ENSEEEG00000007583)	pdcd6ip (ENSEEEG00000007746)	ENSEEEG00000007750 #22	cyhr1 (ENSEEEG00000007751)	ENSEEEG00000007752	fabp3 (ENSEEEG00000007764)	atoh1a (ENSEEEG00000007767)	grid2 (ENSEEEG00000007769)	CCSER1 (ENSEEEG00000007776)	trim36 (ENSEEEG00000007779)	pggt1b (ENSEEEG00000007780)	CCDC112 (ENSEEEG00000007784)	fem1c (ENSEEEG00000007787)	tmed7 (ENSEEEG00000007790)	cdo1 (ENSEEEG00000007791)	AP3S1 (ENSEEEG00000007792)	COMMD10 (ENSEEEG00000007793)	sema6a (ENSEEEG00000007795)
Characoidei	ANCESTRAL SPECIES	3	ENSGT00550000075028	ENSGT00940000162345.c.b	ENSGT00940000163854.a.b	ENSGT00390000000698	ENSGT00940000164843.b	ENSGT00940000163923	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000177252	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476.j	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638	ENSGT00950000183168.B.a	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a	ENSGT00940000177340
Red-bellied piranha	MODERN SPECIES	1	vps45 (ENSPNAG00000028257)	zgc:153441 (ENSPNAG00000028176)	pogza (ENSPNAG00000028135)	psmb4 (ENSPNAG00000028094)	ENSPNAG00000028062	si:dkey-228a15.1 (ENSPNAG00000027998)	sytl1 (ENSPNAG00000027953)	fkbp9 (ENSPNAG00000006917)	crtap (ENSPNAG00000005901)	ENSPNAG00000005380	fbxl2 (ENSPNAG00000027462)	ENSPNAG00000006481	clasp2 (ENSPNAG00000027362)	ubp1 (ENSPNAG00000027222)	pdcd6ip (ENSPNAG00000027171)	ENSPNAG00000004162 #22	cyhr1 (ENSPNAG00000005034)	DCLK3 (ENSPNAG00000026847)	fabp3 (ENSPNAG00000004117)	zcchc17 (ENSPNAG00000026780)	snrnp40 (ENSPNAG00000026769)	nkain1 (ENSPNAG00000026733)	pum1 (ENSPNAG00000026728)	SDC3 (ENSPNAG00000007081)	ENSPNAG00000026558	ENSPNAG00000026544	matn1 (ENSPNAG00000007138)	sesn2 (ENSPNAG00000006738)	yrk (ENSPNAG00000004051)	AHDC1 (ENSPNAG00000004726)	ENSPNAG00000026358
Mexicana tetra	MODERN SPECIES	15	anp32e (ENSAMXG00000020504)	vps45 (ENSAMXG00000020513)	zgc:153441 (ENSAMXG00000020517)	pogza (ENSAMXG00000020522)	psmb4 (ENSAMXG00000020525)	ENSAMXG00000020532	si:dkey-228a15.1 (ENSAMXG00000032047)	sytl1 (ENSAMXG00000031491)	fkbp9 (ENSAMXG00000020542)	crtap (ENSAMXG00000020548)	ENSAMXG00000020553	fbxl2 (ENSAMXG00000042893)	clasp2 (ENSAMXG00000020565)	ubp1 (ENSAMXG00000020575)	pdcd6ip (ENSAMXG00000020580)	ENSAMXG00000020587 #22	cyhr1 (ENSAMXG00000020589)	ENSAMXG00000032506	ENSAMXG00000036806	fabp3 (ENSAMXG00000042510)	zcchc17 (ENSAMXG00000020595)	snrnp40 (ENSAMXG00000020599)	nkain1 (ENSAMXG00000042549)	pum1 (ENSAMXG00000020607)	SDC3 (ENSAMXG00000020610)	ENSAMXG00000037645	ENSAMXG00000037364	matn1 (ENSAMXG00000020612)	sesn2 (ENSAMXG00000020616)	yrk (ENSAMXG00000020619)	AHDC1 (ENSAMXG00000025287)
Cyprinoidei	ANCESTRAL SPECIES	15	ENSGT00550000075028	ENSGT00940000162345.c.b	ENSGT00940000163854.a.b	ENSGT00390000000698	ENSGT00940000164843.b	ENSGT00940000163923.c	ENSGT00940000163923.d	ENSGT00940000160932	ENSGT00940000157125	ENSGT00940000153814.a	ENSGT00390000009163	ENSGT00940000153845.a.b	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000163083	ENSGT00940000156095.n #22	ENSGT00390000018258	ENSGT00940000159476.j.b	ENSGT00940000159476.i	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209	ENSGT00650000093445	ENSGT00940000175786	ENSGT00940000159638.g	ENSGT00950000183168.B.a	ENSGT00940000157554	ENSGT00390000018883
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	97	ENSGT00530000063760.b.g.b.b	ENSGT00550000075028.b	ENSGT00940000162345.c.b.d	ENSGT00940000163854.a.b.c	ENSGT00390000000698.a	ENSGT00940000163923.c.a	ENSGT00940000163923.d	ENSGT00940000160932.f	ENSGT00940000157125.h	ENSGT00940000153814.a.h	ENSGT00390000009163.h	ENSGT00940000153845.a.b.d	ENSGT00940000155574.C.p	ENSGT00940000156148.a	ENSGT00940000163083.g	ENSGT00940000156095.n.a #22	ENSGT00390000018258.n	ENSGT00940000159476.j.b	ENSGT00940000159476.i	ENSGT00940000155104.i	ENSGT00510000047363.ec	ENSGT00940000155058.r	ENSGT00940000159949.d	ENSGT00940000158079.a	ENSGT00940000160209.a	ENSGT00650000093445.d	ENSGT00940000175786.a	ENSGT00940000159638.g.a	ENSGT00950000183168.B.a.a	ENSGT00940000157554.s.a	ENSGT00390000018883.c
Goldfish	MODERN SPECIES	38	si:ch211-191i18.4 (ENSCARG00000048519)	cart4 (ENSCARG00000048536)	si:ch211-191i18.2 (ENSCARG00000048557)	anp32e (ENSCARG00000048578)	plekho1a (ENSCARG00000048649)	vps45 (ENSCARG00000048965)	psmb4 (ENSCARG00000052384)	zgc:110239 (ENSCARG00000052467)	fkbp9 (ENSCARG00000052586)	crtap (ENSCARG00000052603)	ENSCARG00000052628	fbxl2 (ENSCARG00000052662)	clasp2 (ENSCARG00000053032)	ubp1 (ENSCARG00000060341)	pdcd6ip (ENSCARG00000064352)	ENSCARG00000065429 #22	cyhr1 (ENSCARG00000065469)	FABP-3 (ENSCARG00000065484)	zcchc17 (ENSCARG00000065499)	snrnp40 (ENSCARG00000065518)	nkain1 (ENSCARG00000065536)	pum1 (ENSCARG00000065574)	SDC3 (ENSCARG00000065809)	ENSCARG00000065818	ENSCARG00000065824	matn1 (ENSCARG00000065836)	sesn2 (ENSCARG00000018320)	yrk (ENSCARG00000018346)	AHDC1 (ENSCARG00000018410)	wasf2 (ENSCARG00000018420)	CD164L2 (ENSCARG00000018441)
Cyprininae_a	ANCESTRAL SPECIES	124	ENSGT00530000063760.b.g.b.b	ENSGT00550000075028.b	ENSGT00940000162345.c.b.d	ENSGT00940000163854.a.b.c	ENSGT00390000000698.a	ENSGT00940000163923.c.a	ENSGT00940000163923.d.a	ENSGT00940000160932.f	ENSGT00940000157125.h	ENSGT00940000153814.a.h	ENSGT00390000009163.g.b	ENSGT00940000153845.a.b.d	ENSGT00940000155574.C.p	ENSGT00940000156148.a	ENSGT00940000163083.g	ENSGT00940000156095.n.a #22	ENSGT00390000018258.n	ENSGT00940000159476.j.b	ENSGT00940000159476.i	ENSGT00940000155104.i	ENSGT00510000047363.ec	ENSGT00940000155058.r	ENSGT00940000159949.d	ENSGT00940000158079.a	ENSGT00940000160209.a	ENSGT00650000093445.d	ENSGT00940000175786.a	ENSGT00940000159638.g.a	ENSGT00950000183168.B.a.a	ENSGT00940000157554.s.a	ENSGT00390000018883.c
Common carp reference	MODERN SPECIES	31	anp32e (ENSCCRG00000056899)	plekho1a (ENSCCRG00000066890)	vps45 (ENSCCRG00000026127)	pogza (ENSCCRG00000044068)	psmb4 (ENSCCRG00000044045)	zgc:110239 (ENSCCRG00000002891)	ENSCCRG00000081507	sytl1 (ENSCCRG00000035579)	fkbp9 (ENSCCRG00000058661)	crtap (ENSCCRG00000001962)	ENSCCRG00000072043	fbxl2 (ENSCCRG00000002255)	clasp2 (ENSCCRG00000055976)	ubp1 (ENSCCRG00000042284)	pdcd6ip (ENSCCRG00000041357)	ENSCCRG00000050861 #22	cyhr1 (ENSCCRG00000072599)	ENSCCRG00000079492	ENSCCRG00000050856	fabp3 (ENSCCRG00000050853)	zcchc17 (ENSCCRG00000050846)	snrnp40 (ENSCCRG00000079296)	pum1 (ENSCCRG00000050733)	SDC3 (ENSCCRG00000042010)	ENSCCRG00000050201	ENSCCRG00000081784	matn1 (ENSCCRG00000079213)	sesn2 (ENSCCRG00000031091)	yrk (ENSCCRG00000061987)	AHDC1 (ENSCCRG00000062000)	wasf2 (ENSCCRG00000071212)
Golden-line barbel	MODERN SPECIES	143	cart4 (ENSSGRG00000000236)	si:ch211-191i18.2 (ENSSGRG00000000239)	anp32e (ENSSGRG00000000249)	plekho1a (ENSSGRG00000000266)	vps45 (ENSSGRG00000000381)	zgc:153441 (ENSSGRG00000000737)	pogza (ENSSGRG00000000740)	psmb4 (ENSSGRG00000000741)	zgc:110239 (ENSSGRG00000000783)	fkbp9 (ENSSGRG00000000792)	crtap (ENSSGRG00000000939)	fbxl2 (ENSSGRG00000000940)	clasp2 (ENSSGRG00000001095)	ubp1 (ENSSGRG00000014216)	pdcd6ip (ENSSGRG00000014905)	ENSSGRG00000014977 #22	cyhr1 (ENSSGRG00000014978)	DCLK3 (ENSSGRG00000014979)	fabp3 (ENSSGRG00000014983)	zcchc17 (ENSSGRG00000014987)	snrnp40 (ENSSGRG00000014990)	nkain1 (ENSSGRG00000015064)	pum1 (ENSSGRG00000015138)	SDC3 (ENSSGRG00000018132)	ENSSGRG00000018133	ENSSGRG00000018134	matn1 (ENSSGRG00000018135)	yrk (ENSSGRG00000018208)	AHDC1 (ENSSGRG00000023178)	wasf2 (ENSSGRG00000023179)	gpr3 (ENSSGRG00000023180)
Cyprininae	ANCESTRAL SPECIES	59	ENSGT00530000063760.b.g.b.a	ENSGT00550000075028.a	ENSGT00940000162345.c.b.c	ENSGT00940000163854.a.b.d	ENSGT00390000000698.b	ENSGT00940000164843.b.h	ENSGT00940000163923.c.b	ENSGT00940000160932.e	ENSGT00940000157125.g	ENSGT00940000153814.a.g	ENSGT00390000009163.g.a	ENSGT00940000153845.a.b.c	ENSGT00940000155574.C.o	ENSGT00940000156148.b	ENSGT00940000163083.h	ENSGT00940000156095.n.b #22	ENSGT00390000018258.m	ENSGT00940000159476.j.a	ENSGT00940000155104.j	ENSGT00510000047363.fc	ENSGT00940000155058.q	ENSGT00940000159949.c	ENSGT00940000158079.b	ENSGT00940000160209.b	ENSGT00650000093445.c	ENSGT00940000175786.b	ENSGT00940000159638.g.b	ENSGT00950000183168.B.a.b	ENSGT00940000157554.s.b	ENSGT00390000018883.d	ENSGT00390000002881
Cyprininae_a	ANCESTRAL SPECIES	1	ENSGT00550000075028.a	ENSGT00940000162345.c.b.c	ENSGT00940000163854.a.b.d	ENSGT00390000000698.b	ENSGT00940000164843.b.h	ENSGT00940000163923.c.b	ENSGT00940000163923.d.b	ENSGT00940000160932.e	ENSGT00940000157125.g	ENSGT00940000153814.a.g	ENSGT00390000009163.g.a	ENSGT00940000153845.a.b.c	ENSGT00940000155574.C.o	ENSGT00940000156148.b	ENSGT00940000163083.h	ENSGT00940000156095.n.b #22	ENSGT00390000018258.m	ENSGT00940000159476.j.a	ENSGT00940000155104.j	ENSGT00510000047363.fc	ENSGT00940000155058.q	ENSGT00940000159949.c	ENSGT00940000158079.b	ENSGT00940000160209.b	ENSGT00650000093445.c	ENSGT00940000175786.b	ENSGT00940000159638.g.b	ENSGT00950000183168.B.a.b	ENSGT00940000157554.s.b	ENSGT00390000018883.d	ENSGT00950000182962.b.a.b
Golden-line barbel	MODERN SPECIES	172	plekho1a (ENSSGRG00000041968)	vps45 (ENSSGRG00000042003)	zgc:153441 (ENSSGRG00000042738)	pogza (ENSSGRG00000042741)	psmb4 (ENSSGRG00000042745)	ENSSGRG00000042784	zgc:110239 (ENSSGRG00000042785)	sytl1 (ENSSGRG00000042790)	fkbp9 (ENSSGRG00000042792)	crtap (ENSSGRG00000042826)	ENSSGRG00000042827	fbxl2 (ENSSGRG00000042830)	clasp2 (ENSSGRG00000042883)	ubp1 (ENSSGRG00000045392)	pdcd6ip (ENSSGRG00000045411)	ENSSGRG00000045526 #22	cyhr1 (ENSSGRG00000045527)	ENSSGRG00000045528	ENSSGRG00000045529	fabp3 (ENSSGRG00000045530)	zcchc17 (ENSSGRG00000045534)	snrnp40 (ENSSGRG00000045535)	nkain1 (ENSSGRG00000045553)	pum1 (ENSSGRG00000045643)	SDC3 (ENSSGRG00000047524)	ENSSGRG00000047526	ENSSGRG00000047527	matn1 (ENSSGRG00000047529)	sesn2 (ENSSGRG00000047531)	yrk (ENSSGRG00000047533)	AHDC1 (ENSSGRG00000047539)
Common carp reference	MODERN SPECIES	12	vps45 (ENSCCRG00000003059)	zgc:153441 (ENSCCRG00000056157)	pogza (ENSCCRG00000065504)	psmb4 (ENSCCRG00000055225)	ENSCCRG00000002902	zgc:110239 (ENSCCRG00000068735)	ENSCCRG00000051612	sytl1 (ENSCCRG00000051613)	fkbp9 (ENSCCRG00000002002)	crtap (ENSCCRG00000062249)	ENSCCRG00000059505	fbxl2 (ENSCCRG00000051455)	clasp2 (ENSCCRG00000061111)	ubp1 (ENSCCRG00000047174)	pdcd6ip (ENSCCRG00000042173)	ENSCCRG00000042036 #22	cyhr1 (ENSCCRG00000050859)	ENSCCRG00000057137	ENSCCRG00000071079	fabp3 (ENSCCRG00000050276)	zcchc17 (ENSCCRG00000050274)	snrnp40 (ENSCCRG00000050273)	nkain1 (ENSCCRG00000050272)	pum1 (ENSCCRG00000050210)	SDC3 (ENSCCRG00000050207)	ENSCCRG00000075270	ENSCCRG00000050193	matn1 (ENSCCRG00000050188)	yrk (ENSCCRG00000028075)	AHDC1 (ENSCCRG00000042824)	ENSCCRG00000042892
Goldfish	MODERN SPECIES	10	plekho1a (ENSCARG00000046622)	vps45 (ENSCARG00000045242)	zgc:153441 (ENSCARG00000045183)	pogza (ENSCARG00000045129)	psmb4 (ENSCARG00000044987)	ENSCARG00000044928	zgc:110239 (ENSCARG00000044749)	sytl1 (ENSCARG00000044689)	fkbp9 (ENSCARG00000044147)	crtap (ENSCARG00000044077)	ENSCARG00000044060	fbxl2 (ENSCARG00000043901)	clasp2 (ENSCARG00000033627)	ubp1 (ENSCARG00000031869)	pdcd6ip (ENSCARG00000029920)	ENSCARG00000029843 #22	ENSCARG00000029833	cyhr1 (ENSCARG00000029823)	DCLK3 (ENSCARG00000029807)	fabp3 (ENSCARG00000029792)	zcchc17 (ENSCARG00000029769)	snrnp40 (ENSCARG00000029636)	nkain1 (ENSCARG00000029596)	pum1 (ENSCARG00000029238)	ENSCARG00000029181	ENSCARG00000029176	matn1 (ENSCARG00000029150)	sesn2 (ENSCARG00000029114)	yrk (ENSCARG00000028409)	AHDC1 (ENSCARG00000028377)	wasf2 (ENSCARG00000028362)
Zebrafish	MODERN SPECIES	10	psmb4 (ENSDARG00000054696)	ENSDARG00000054690	zgc:110239 (ENSDARG00000077664)	zgc:123103 (ENSDARG00000099200)	ENSDARG00000035665	si:dkey-228a15.1 (ENSDARG00000095698)	zgc:103438 (ENSDARG00000035663)	sytl1 (ENSDARG00000070094)	fkbp9 (ENSDARG00000005023)	crtap (ENSDARG00000018010)	ENSDARG00000088277	fbxl2 (ENSDARG00000012135)	clasp2 (ENSDARG00000020345)	ubp1 (ENSDARG00000018000)	pdcd6ip (ENSDARG00000025269)	ENSDARG00000061081 #22	cyhr1 (ENSDARG00000061057)	DCLK3 (ENSDARG00000078997)	fabp3 (ENSDARG00000023290)	zcchc17 (ENSDARG00000018936)	snrnp40 (ENSDARG00000023160)	nkain1 (ENSDARG00000006859)	pum1 (ENSDARG00000099256)	eef1a1l1 (ENSDARG00000020850)	ENSDARG00000109996	gnrhr1 (ENSDARG00000100593)	DGKD (ENSDARG00000113111)	ENSDARG00000101785	matn1 (ENSDARG00000030215)	sesn2 (ENSDARG00000070012)	yrk (ENSDARG00000004378)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000156095.n #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000156095.n #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000156095.n #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000156095.n #22
Tiger tail seahorse	MODERN SPECIES	231				nfatc1 (ENSHCOG00000004681)	atp9b (ENSHCOG00000004727)	sall3b (ENSHCOG00000004745)	ENSHCOG00000004754	fkbp9 (ENSHCOG00000004765)	crtap (ENSHCOG00000004794)	ENSHCOG00000004809	fbxl2 (ENSHCOG00000004849)	ENSHCOG00000004857	clasp2 (ENSHCOG00000004910)	ubp1 (ENSHCOG00000004965)	pdcd6ip (ENSHCOG00000004996)	ENSHCOG00000005036 #22	cyhr1 (ENSHCOG00000005045)	ENSHCOG00000005054	ENSHCOG00000005061	fabp3 (ENSHCOG00000005071)	zcchc17 (ENSHCOG00000005075)	snrnp40 (ENSHCOG00000005094)	nkain1 (ENSHCOG00000005114)	ENSHCOG00000005122	pum1 (ENSHCOG00000005149)	SDC3 (ENSHCOG00000005166)	ENSHCOG00000005175	matn1 (ENSHCOG00000005192)	ENSHCOG00000005199	slc52a2 (ENSHCOG00000005205)	ENSHCOG00000005215
Elephant shark	MODERN SPECIES	1530	DPP10 (ENSCMIG00000007762) #7	ENSCMIG00000007872	actr3 (ENSCMIG00000007938) #8	SLC35F5 (ENSCMIG00000008172) #9	gpr39 (ENSCMIG00000008236) #10	LYPD1 (ENSCMIG00000008240) #11	ENSCMIG00000008243 #12	mgat5 (ENSCMIG00000008251) #13	tmem163a (ENSCMIG00000008264) #15	acmsd (ENSCMIG00000008270) #16	ccnt2a (ENSCMIG00000008284) #17	ENSCMIG00000008294 #18	ENSCMIG00000008296	rab3gap1 (ENSCMIG00000008312) #19	ZRANB3 (ENSCMIG00000008375) #21	R3HDM1 (ENSCMIG00000008457) #22	UBXN4 (ENSCMIG00000008493) #23	LCT (ENSCMIG00000008504) #24	mcm6 (ENSCMIG00000008585) ##25	dars1 (ENSCMIG00000008857) #26	cxcr4 (ENSCMIG00000008881) #27	THSD7B (ENSCMIG00000008887) #30	HNMT (ENSCMIG00000008896) #31	spopla (ENSCMIG00000008905)	NXPH2 (ENSCMIG00000008917) #34	ENSCMIG00000008918	ENSCMIG00000008921	ENSCMIG00000008923	brinp1 (ENSCMIG00000008925)	ASTN2 (ENSCMIG00000008928)	pappaa (ENSCMIG00000008942)
Cyclostomata	DUPLICATION
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000156095.o.a #22
Lamprey	MODERN SPECIES	628																ENSPMAG00000003369 #22	ENSPMAG00000003421	CLASP1 (ENSPMAG00000003427)	ENSPMAG00000003474	upp1 (ENSPMAG00000003514)	ENSPMAG00000003522	ENSPMAG00000003528	FBXL20 (ENSPMAG00000003530)	ENSPMAG00000003556	ENSPMAG00000003578 #18	ENSPMAG00000003584	ENSPMAG00000003588
Hagfish	MODERN SPECIES	175			ENSEBUG00000015660	ENSEBUG00000014383	ENSEBUG00000007429	ENSEBUG00000003308	ENSEBUG00000002338	ENSEBUG00000004036	ENSEBUG00000004092	ENSEBUG00000009458	ENSEBUG00000009601	ENSEBUG00000015350	ENSEBUG00000006255	ENSEBUG00000007685 #21	ENSEBUG00000012253	ENSEBUG00000009629 #22	ENSEBUG00000005143 #22	ENSEBUG00000003871	ENSEBUG00000004982
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000156095.o.b #22
Lamprey	MODERN SPECIES	6								SLC35F5 (ENSPMAG00000006998) #9	ENSPMAG00000007019	ZBTB47 (ENSPMAG00000007050)	phb (ENSPMAG00000007052)	cmbl (ENSPMAG00000007077)	mettl2a (ENSPMAG00000007098)	ENSPMAG00000007120	pgap3 (ENSPMAG00000007161)	ENSPMAG00000007184 #22	ENSPMAG00000007211	pdcd6ip (ENSPMAG00000007225)	tfcp2l1 (ENSPMAG00000007229)	ENSPMAG00000007258	ENSPMAG00000007261	nifk (ENSPMAG00000007316)	ENSPMAG00000007325	ENSPMAG00000007364	ENSPMAG00000007366	ENSPMAG00000007375
Hagfish	MODERN SPECIES	175		ENSEBUG00000015660	ENSEBUG00000014383	ENSEBUG00000007429	ENSEBUG00000003308	ENSEBUG00000002338	ENSEBUG00000004036	ENSEBUG00000004092	ENSEBUG00000009458	ENSEBUG00000009601	ENSEBUG00000015350	ENSEBUG00000006255	ENSEBUG00000007685 #21	ENSEBUG00000012253	ENSEBUG00000009629 #22	ENSEBUG00000005143 #22	ENSEBUG00000003871	ENSEBUG00000004982
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000156095.p #22
Hagfish	MODERN SPECIES	699						pym1 (ENSEBUG00000006292)	ENSEBUG00000003099	ENSEBUG00000013021	hprt1 (ENSEBUG00000001984)	ENSEBUG00000010173	ENSEBUG00000001562	ENSEBUG00000015258	ENSEBUG00000008350	ENSEBUG00000003028	ENSEBUG00000001183	ENSEBUG00000014746 #22