Boreoeutheria	ANCESTRAL SPECIES	19	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT01100000264651	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01030000234950	ENSGT00510000055281	ENSGT00390000017350
Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01030000234950	ENSGT00510000055281	ENSGT00390000017350
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Glires	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Lagomorpha	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.s.a	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a.d	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01100000263544.c.b	ENSGT00940000164066	ENSGT00390000012840	ENSGT00390000003680.b.b
Pika	MODERN SPECIES	4257													PLEKHF2 (ENSOPRG00000007083) #19	NDUFAF6 (ENSOPRG00000018893) #20	TP53INP1 (ENSOPRG00000007070) #21	CCNE2 (ENSOPRG00000007056) #22	INTS8 (ENSOPRG00000007018) #23	ENSOPRG00000006994 #24
Rabbit	MODERN SPECIES	14	MTDH (ENSOCUG00000011400)	ENSOCUG00000031706	TSPYL5 (ENSOCUG00000009903)	CPQ (ENSOCUG00000014385)	ENSOCUG00000002662	ENSOCUG00000038859	PTDSS1 (ENSOCUG00000004281)	MTERF3 (ENSOCUG00000004276)	ENSOCUG00000008113	ENSOCUG00000038874	GDF6 (ENSOCUG00000008104)	ENSOCUG00000034200	CFAP418 (ENSOCUG00000001062)	NDUFAF6 (ENSOCUG00000006635) #20	TP53INP1 (ENSOCUG00000016241) #21	CCNE2 (ENSOCUG00000005398) #22	INTS8 (ENSOCUG00000005386) #23	DPY19L4 (ENSOCUG00000001317)	ESRP1 (ENSOCUG00000001316)	VIRMA (ENSOCUG00000016495)	RAD54B (ENSOCUG00000016478)	GEM (ENSOCUG00000001030)	CDH17 (ENSOCUG00000001029)	PDP1 (ENSOCUG00000003939)	TMEM67 (ENSOCUG00000010390)	RBM12B (ENSOCUG00000010353)	CIBAR1 (ENSOCUG00000010331)	ENSOCUG00000039147	TRIQK (ENSOCUG00000034527)	ENSOCUG00000022069	RUNX1T1 (ENSOCUG00000003754)
Rodentia	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00390000012138.a.b.s.a.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01030000234950	ENSGT00390000017350	ENSGT00950000183176.b.f
Marmotini	ANCESTRAL SPECIES	10	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00950000183087.A.a.a.b	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00950000183087.A.a.a.b	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Squirrel	MODERN SPECIES	144											CFAP418 (ENSSTOG00000030899)	PLEKHF2 (ENSSTOG00000007760) #19	ENSSTOG00000031480	NDUFAF6 (ENSSTOG00000029178) #20	TP53INP1 (ENSSTOG00000004462) #21	CCNE2 (ENSSTOG00000004435) #22	INTS8 (ENSSTOG00000004379) #23	DPY19L4 (ENSSTOG00000014342)	ESRP1 (ENSSTOG00000014330)	VIRMA (ENSSTOG00000010804)	FSBP (ENSSTOG00000010801)	RAD54B (ENSSTOG00000010791)	GEM (ENSSTOG00000010786)	CDH17 (ENSSTOG00000002021)	PDP1 (ENSSTOG00000028703)	TMEM67 (ENSSTOG00000010296)	RBM12B (ENSSTOG00000027445)	CIBAR1 (ENSSTOG00000010284)	TRIQK (ENSSTOG00000002731)	RUNX1T1 (ENSSTOG00000002287)	SLC26A7 (ENSSTOG00000000314)
Arctic ground squirrel	MODERN SPECIES	1	LAPTM4B (ENSUPAG00010013282)	MTDH (ENSUPAG00010013325)	TSPYL5 (ENSUPAG00010013417)	CPQ (ENSUPAG00010013448)	SDC2 (ENSUPAG00010013453)	PTDSS1 (ENSUPAG00010013461)	MTERF3 (ENSUPAG00010013471)	ENSUPAG00010013496	GDF6 (ENSUPAG00010013503)	ENSUPAG00010013507	CFAP418 (ENSUPAG00010013512)	ENSUPAG00010013522	NDUFAF6 (ENSUPAG00010013528) #20	ENSUPAG00010013541	TP53INP1 (ENSUPAG00010013560) #21	CCNE2 (ENSUPAG00010013567) #22	INTS8 (ENSUPAG00010013609) #23	DPY19L4 (ENSUPAG00010013851)	ESRP1 (ENSUPAG00010013887)	VIRMA (ENSUPAG00010013956)	RAD54B (ENSUPAG00010013994)	FSBP (ENSUPAG00010014019)	GEM (ENSUPAG00010014039)	CDH17 (ENSUPAG00010014050)	PDP1 (ENSUPAG00010014089)	TMEM67 (ENSUPAG00010014102)	RBM12B (ENSUPAG00010014125)	CIBAR1 (ENSUPAG00010014134)	ENSUPAG00010014163	RUNX1T1 (ENSUPAG00010014181)	SLC26A7 (ENSUPAG00010015342)
Alpin marmot	MODERN SPECIES	16			TSPYL5 (ENSMMMG00000008584)	CPQ (ENSMMMG00000008567)	ENSMMMG00000008536	PTDSS1 (ENSMMMG00000008511)	MTERF3 (ENSMMMG00000008506)	UQCRB (ENSMMMG00000008500)	GDF6 (ENSMMMG00000008496)	CFAP418 (ENSMMMG00000008466)	ENSMMMG00000008450	PLEKHF2 (ENSMMMG00000008447) #19	ENSMMMG00000008444	NDUFAF6 (ENSMMMG00000008438) #20	TP53INP1 (ENSMMMG00000008423) #21	CCNE2 (ENSMMMG00000008373) #22	INTS8 (ENSMMMG00000007978) #23	DPY19L4 (ENSMMMG00000007948)	ESRP1 (ENSMMMG00000007808)	ENSMMMG00000007791	VIRMA (ENSMMMG00000007702)	FSBP (ENSMMMG00000007694)	RAD54B (ENSMMMG00000007647)	GEM (ENSMMMG00000007618)	CDH17 (ENSMMMG00000007567)	PDP1 (ENSMMMG00000007532)	TMEM67 (ENSMMMG00000007499)	RBM12B (ENSMMMG00000007433)	CIBAR1 (ENSMMMG00000007347)	TRIQK (ENSMMMG00000007334)	RUNX1T1 (ENSMMMG00000007235)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES		LAPTM4B (ENSSVLG00005002108)	ENSSVLG00005002092	ENSSVLG00005002083	ENSSVLG00005002034	TSPYL5 (ENSSVLG00005002014)	CPQ (ENSSVLG00005001998)	SDC2 (ENSSVLG00005001979)	PTDSS1 (ENSSVLG00005001955)	MTERF3 (ENSSVLG00005001923)	ENSSVLG00005001896	GDF6 (ENSSVLG00005001881)	CFAP418 (ENSSVLG00005001864)	ENSSVLG00005001851 #19	ENSSVLG00005001825 #20	TP53INP1 (ENSSVLG00005001805) #21	ENSSVLG00005001753 #22	INTS8 (ENSSVLG00005001719) #23	DPY19L4 (ENSSVLG00005001687)	ESRP1 (ENSSVLG00005001584)	VIRMA (ENSSVLG00005001519)	RAD54B (ENSSVLG00005001462)	GEM (ENSSVLG00005001435)	CDH17 (ENSSVLG00005001288)	PDP1 (ENSSVLG00005001123)	TMEM67 (ENSSVLG00005001049)	RBM12B (ENSSVLG00005001004)	CIBAR1 (ENSSVLG00005000981)	ENSSVLG00005000951	ENSSVLG00005000943	ENSSVLG00005000855	SLC26A7 (ENSSVLG00005000726)
Eurasian red squirrel	MODERN SPECIES	5	SLC30A3 (ENSSVLG00005025863)	DNAJC5G (ENSSVLG00005025852)	TRIM54 (ENSSVLG00005025846)	UCN (ENSSVLG00005025844)	MPV17 (ENSSVLG00005025836)	GTF3C2 (ENSSVLG00005025819)	EIF2B4 (ENSSVLG00005025809)	SNX17 (ENSSVLG00005025802)	ZNF513 (ENSSVLG00005025796)	ENSSVLG00005025791	NRBP1 (ENSSVLG00005025787)	KRTCAP3 (ENSSVLG00005025779)	IFT172 (ENSSVLG00005025773)	FNDC4 (ENSSVLG00005025764)	GCKR (ENSSVLG00005025756)	ENSSVLG00005025747 #22	ENSSVLG00005025740	ENSSVLG00005025711	ENSSVLG00005025695	ENSSVLG00005025673	SUPT7L (ENSSVLG00005025640)	SLC4A1AP (ENSSVLG00005025630)	MRPL33 (ENSSVLG00005025615)	RBKS (ENSSVLG00005025606)	BABAM2 (ENSSVLG00005025587)	FOSL2 (ENSSVLG00005025575)	PLB1 (ENSSVLG00005025523)	PPP1CB (ENSSVLG00005025485)	SPDYA (ENSSVLG00005025476)	TRMT61B (ENSSVLG00005025465)	ENSSVLG00005025441
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Hystricomorpha_b	ANCESTRAL SPECIES	25	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Degu	DUPLICATION
Degu	MODERN SPECIES	175				ENSODEG00000004148	CPQ (ENSODEG00000004178)	SDC2 (ENSODEG00000004200)	PTDSS1 (ENSODEG00000004210)	MTERF3 (ENSODEG00000002232)	GDF6 (ENSODEG00000002393)	CFAP418 (ENSODEG00000002430)	ENSODEG00000002462	NDUFAF6 (ENSODEG00000002477) #20	ENSODEG00000002493	ENSODEG00000002658	TP53INP1 (ENSODEG00000002683) #21	ENSODEG00000002694 #22	INTS8 (ENSODEG00000002766) #23	ENSODEG00000018890	DPY19L4 (ENSODEG00000003026)	ESRP1 (ENSODEG00000002165)	ENSODEG00000002361	VIRMA (ENSODEG00000002449)	ENSODEG00000018816	ENSODEG00000002650	ENSODEG00000018878	ENSODEG00000018916	GEM (ENSODEG00000004933)	ENSODEG00000004970	CDH17 (ENSODEG00000004993)	PDP1 (ENSODEG00000005061)	TMEM67 (ENSODEG00000005116)
Degu	MODERN SPECIES	272													ENSODEG00000000303	ENSODEG00000000289	FAT4 (ENSODEG00000000248)	ENSODEG00000018649 #22	ANKRD50 (ENSODEG00000000902)	ENSODEG00000018609	ENSODEG00000018626
Long-tailed chinchilla	MODERN SPECIES	124	MATN2 (ENSCLAG00000005911)	LAPTM4B (ENSCLAG00000005642)	MTDH (ENSCLAG00000007884)	ENSCLAG00000007799	TSPYL5 (ENSCLAG00000007761)	CPQ (ENSCLAG00000007372)	SDC2 (ENSCLAG00000006071)	PTDSS1 (ENSCLAG00000005033)	MTERF3 (ENSCLAG00000004692)	UQCRB (ENSCLAG00000004601)	GDF6 (ENSCLAG00000007858)	CFAP418 (ENSCLAG00000007631)	PLEKHF2 (ENSCLAG00000007453) #19	NDUFAF6 (ENSCLAG00000007265) #20	TP53INP1 (ENSCLAG00000007072) #21	CCNE2 (ENSCLAG00000006670) #22	INTS8 (ENSCLAG00000006242) #23	DPY19L4 (ENSCLAG00000008110)	ENSCLAG00000007117	ESRP1 (ENSCLAG00000015531)	VIRMA (ENSCLAG00000013204)	FSBP (ENSCLAG00000013136)	RAD54B (ENSCLAG00000010476)	GEM (ENSCLAG00000010140)	CDH17 (ENSCLAG00000014507)	PDP1 (ENSCLAG00000013964)	TMEM67 (ENSCLAG00000006451)	RBM12B (ENSCLAG00000017617)	CIBAR1 (ENSCLAG00000005013)	TRIQK (ENSCLAG00000004830)	RUNX1T1 (ENSCLAG00000006551)
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES		RIDA (ENSCPOG00000036991)	RPL30 (ENSCPOG00000030315)	MATN2 (ENSCPOG00000003062)	LAPTM4B (ENSCPOG00000020368)	MTDH (ENSCPOG00000037219)	CPQ (ENSCPOG00000007260)	SDC2 (ENSCPOG00000036427)	PTDSS1 (ENSCPOG00000003491)	MTERF3 (ENSCPOG00000003487)	UQCRB (ENSCPOG00000037355)	GDF6 (ENSCPOG00000010549)	CFAP418 (ENSCPOG00000038754)	PLEKHF2 (ENSCPOG00000037254) #19	NDUFAF6 (ENSCPOG00000010701) #20	TP53INP1 (ENSCPOG00000037283) #21	ENSCPOG00000013401 #22	INTS8 (ENSCPOG00000013395) #23	DPY19L4 (ENSCPOG00000013388)	ESRP1 (ENSCPOG00000012197)	VIRMA (ENSCPOG00000009333)	RAD54B (ENSCPOG00000011643)	FSBP (ENSCPOG00000009332)	GEM (ENSCPOG00000009714)	CDH17 (ENSCPOG00000006582)	TMEM67 (ENSCPOG00000007816)	RBM12B (ENSCPOG00000007815)	CIBAR1 (ENSCPOG00000007802)	TRIQK (ENSCPOG00000031688)	RUNX1T1 (ENSCPOG00000026546)	SLC26A7 (ENSCPOG00000002686)	LRRC69 (ENSCPOG00000021324)
Guinea pig	MODERN SPECIES	64							FAM110B (ENSCPOG00000033617)	BPNT2 (ENSCPOG00000023705)	PENK (ENSCPOG00000031786)	ENSCPOG00000020018	SDR16C5 (ENSCPOG00000000571)	CHCHD7 (ENSCPOG00000030280)	PLAG1 (ENSCPOG00000039131)	MOS (ENSCPOG00000020476)	ENSCPOG00000011697	ENSCPOG00000030320 #22	LYN (ENSCPOG00000011693)	TGS1 (ENSCPOG00000009713)	TMEM68 (ENSCPOG00000019826)	XKR4 (ENSCPOG00000003676)	ENSCPOG00000039324	SOX17 (ENSCPOG00000000892)	MRPL15 (ENSCPOG00000035946)	LYPLA1 (ENSCPOG00000022715)	TCEA1 (ENSCPOG00000005886)	ENSCPOG00000038533	ENSCPOG00000022816	ATP6V1H (ENSCPOG00000012174)	ENSCPOG00000023180	OPRK1 (ENSCPOG00000006607)	NPBWR1 (ENSCPOG00000019602)
Naked mole-rat female	MODERN SPECIES	13	ENSHGLG00000021132	ENSHGLG00000021356	CPQ (ENSHGLG00000018667)	SDC2 (ENSHGLG00000017524)	PTDSS1 (ENSHGLG00000017517)	MTERF3 (ENSHGLG00000013588)	ENSHGLG00000039360	GDF6 (ENSHGLG00000008839)	ENSHGLG00000019781	ENSHGLG00000007832	ENSHGLG00000006843	PLEKHF2 (ENSHGLG00000050648) #19	ENSHGLG00000005773 #20	TP53INP1 (ENSHGLG00000041901) #21	AK6 (ENSHGLG00000004657)	CCNE2 (ENSHGLG00000004502) #22	INTS8 (ENSHGLG00000014703) #23	ENSHGLG00000012664	ENSHGLG00000049494	ENSHGLG00000043814	ENSHGLG00000008366	ENSHGLG00000042399	ENSHGLG00000035172	VIRMA (ENSHGLG00000006573)	ENSHGLG00000032542	ENSHGLG00000039726	FSBP (ENSHGLG00000044850)	GEM (ENSHGLG00000006576)	CDH17 (ENSHGLG00000005544)	ENSHGLG00000033913	PDP1 (ENSHGLG00000012388)
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00390000012138.a.b.t.ab	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.o	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Muroidea	ANCESTRAL SPECIES	14	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.o	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Cricetinae	ANCESTRAL SPECIES	31	ENSGT00940000161484	ENSGT00490000043388.b.a	ENSGT00940000159203	ENSGT00940000158777	ENSGT00860000135574	ENSGT00940000162962	ENSGT00940000153141.B.b	ENSGT00390000014100	ENSGT00950000183215.c.a.b	ENSGT00940000157658	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Ythdf3 (ENSCGRG00001021204)	ENSCGRG00001019881	Bhlhe22 (ENSCGRG00001008953)	ENSCGRG00001022412	ENSCGRG00001022769	Armc1 (ENSCGRG00001009936)	Mtfr1 (ENSCGRG00001014598)	Pde7a (ENSCGRG00001016785)	Gdf6 (ENSCGRG00001023428)	ENSCGRG00001024201	Cfap418 (ENSCGRG00001004508)	Plekhf2 (ENSCGRG00001005895) #19	Ndufaf6 (ENSCGRG00001019248) #20	ENSCGRG00001020796	Trp53inp1 (ENSCGRG00001021212) #21	Ccne2 (ENSCGRG00001022482) #22	Ints8 (ENSCGRG00001004108) #23	Dpy19l4 (ENSCGRG00001004221)	Esrp1 (ENSCGRG00001013860)	Virma (ENSCGRG00001018853)	Rad54b (ENSCGRG00001020184)	Fsbp (ENSCGRG00001023519)	Gem (ENSCGRG00001023980)
Golden Hamster	MODERN SPECIES	622	Nkain3 (ENSMAUG00000020121)	Ggh (ENSMAUG00000018444)	Ttpa (ENSMAUG00000017120)	Ythdf3 (ENSMAUG00000012560)	ENSMAUG00000020148	Bhlhe22 (ENSMAUG00000010666)	Cyp7b1 (ENSMAUG00000020201)	Armc1 (ENSMAUG00000019022)	Mtfr1 (ENSMAUG00000018456)	Pde7a (ENSMAUG00000001828)	Gdf6 (ENSMAUG00000013204)	Cfap418 (ENSMAUG00000012621)	Plekhf2 (ENSMAUG00000021429) #19	Ndufaf6 (ENSMAUG00000016511) #20	Trp53inp1 (ENSMAUG00000013323) #21	Ccne2 (ENSMAUG00000011678) #22	Ints8 (ENSMAUG00000009763) #23	Dpy19l4 (ENSMAUG00000009087)	Esrp1 (ENSMAUG00000017300)	Virma (ENSMAUG00000007195)	Fsbp (ENSMAUG00000021489)	Rad54b (ENSMAUG00000013586)	Gem (ENSMAUG00000006962)	Cdh17 (ENSMAUG00000009983)	Tmem67 (ENSMAUG00000001046)	ENSMAUG00000021752	Cibar1 (ENSMAUG00000009551)	Triqk (ENSMAUG00000012998)	Cntn4 (ENSMAUG00000009508)	Il5ra (ENSMAUG00000021101)	Trnt1 (ENSMAUG00000020707)
Cricetidae_B	ANCESTRAL SPECIES	50	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Northern American deer mouse	MODERN SPECIES	11	Nsmaf (ENSPEMG00000019696)	Tox (ENSPEMG00000019966)	Car8 (ENSPEMG00000019908)	ENSPEMG00000012575	Rab2a (ENSPEMG00000001678)	Chd7 (ENSPEMG00000023028)	Clvs1 (ENSPEMG00000030182)	Asph (ENSPEMG00000030609)	Gdf6 (ENSPEMG00000005989)	ENSPEMG00000028934	ENSPEMG00000027337	Cfap418 (ENSPEMG00000028977)	Plekhf2 (ENSPEMG00000013943) #19	Ndufaf6 (ENSPEMG00000018473) #20	Trp53inp1 (ENSPEMG00000029728) #21	Ccne2 (ENSPEMG00000008874) #22	Ints8 (ENSPEMG00000007652) #23	Dpy19l4 (ENSPEMG00000002369)	Esrp1 (ENSPEMG00000020410)	Virma (ENSPEMG00000002167)	Rad54b (ENSPEMG00000012133)	Gem (ENSPEMG00000012652)	ENSPEMG00000013625	Cdh17 (ENSPEMG00000018197)	Pdp1 (ENSPEMG00000028541)	Tmem67 (ENSPEMG00000017838)	ENSPEMG00000008279	Cibar1 (ENSPEMG00000010608)	ENSPEMG00000030089	ENSPEMG00000028954	ENSPEMG00000028937
Prairie vole	MODERN SPECIES	355	Nsmaf (ENSMOCG00000018628)	Tox (ENSMOCG00000013368)	Car8 (ENSMOCG00000018985)	Rab2a (ENSMOCG00000014140)	Chd7 (ENSMOCG00000011408)	ENSMOCG00000010657	Clvs1 (ENSMOCG00000013201)	Asph (ENSMOCG00000013819)	Gdf6 (ENSMOCG00000021011)	ENSMOCG00000000256	Cfap418 (ENSMOCG00000019280)	ENSMOCG00000002359	Plekhf2 (ENSMOCG00000002768) #19	Ndufaf6 (ENSMOCG00000015272) #20	Trp53inp1 (ENSMOCG00000021132) #21	Ccne2 (ENSMOCG00000001638) #22	Ints8 (ENSMOCG00000017112) #23	Dpy19l4 (ENSMOCG00000007197)	Esrp1 (ENSMOCG00000013567)	Virma (ENSMOCG00000015388)	Rad54b (ENSMOCG00000020035)	Fsbp (ENSMOCG00000008704)	Gem (ENSMOCG00000006722)	Cdh17 (ENSMOCG00000010844)	Pdp1 (ENSMOCG00000014340)	Tmem67 (ENSMOCG00000011860)	ENSMOCG00000005603	Cibar1 (ENSMOCG00000011538)	Triqk (ENSMOCG00000007927)	Runx1t1 (ENSMOCG00000017694)	Slc26a7 (ENSMOCG00000009692)
Murinae	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Mus	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Mus_B	ANCESTRAL SPECIES	22	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322.d	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.b	ENSGT00940000153141.B.a	ENSGT00940000154502	ENSGT00940000155059	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b.f	ENSGT00940000153649.A	ENSGT00940000159947	ENSGT00940000156304	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322.d	ENSGT00390000010285.c	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b	ENSGT00940000164066
Steppe mouse	MODERN SPECIES	2764											Cfap418 (ENSMSIG00000015081)	Plekhf2 (ENSMSIG00000015105) #19	Ndufaf6 (ENSMSIG00000015127) #20	ENSMSIG00000015158	Trp53inp1 (ENSMSIG00000015170) #21	Ccne2 (ENSMSIG00000015176) #22	Ints8 (ENSMSIG00000015213) #23	Dpy19l4 (ENSMSIG00000015331)	Esrp1 (ENSMSIG00000015467)	Virma (ENSMSIG00000015653)	Rad54b (ENSMSIG00000015787)	ENSMSIG00000015872
spretus	MODERN SPECIES	13	Ubxn2b (MGP_SPRETEiJ_G0026738)	Cyp7a1 (MGP_SPRETEiJ_G0026739)	Sdcbp (MGP_SPRETEiJ_G0026740)	Nsmaf (MGP_SPRETEiJ_G0026741)	Tox (MGP_SPRETEiJ_G0026742)	Car8 (MGP_SPRETEiJ_G0026743)	Rab2a (MGP_SPRETEiJ_G0026744)	Chd7 (MGP_SPRETEiJ_G0026745)	Clvs1 (MGP_SPRETEiJ_G0026746)	Asph (MGP_SPRETEiJ_G0026747)	Gdf6 (MGP_SPRETEiJ_G0026748)	Cfap418 (MGP_SPRETEiJ_G0026749)	Plekhf2 (MGP_SPRETEiJ_G0026750) #19	Ndufaf6 (MGP_SPRETEiJ_G0026751) #20	Trp53inp1 (MGP_SPRETEiJ_G0026752) #21	Ccne2 (MGP_SPRETEiJ_G0026753) #22	Ints8 (MGP_SPRETEiJ_G0026754) #23	Dpy19l4 (MGP_SPRETEiJ_G0026755)	Esrp1 (MGP_SPRETEiJ_G0026756)	Virma (MGP_SPRETEiJ_G0026757)	Rad54b (MGP_SPRETEiJ_G0026758)	Fsbp (MGP_SPRETEiJ_G0026759)	Gem (MGP_SPRETEiJ_G0026760)	Cdh17 (MGP_SPRETEiJ_G0026761)	Pdp1 (MGP_SPRETEiJ_G0026762)	MGP_SPRETEiJ_G0026763	Tmem67 (MGP_SPRETEiJ_G0026764)	MGP_SPRETEiJ_G0026765	MGP_SPRETEiJ_G0026766	Cibar1 (MGP_SPRETEiJ_G0026767)	Runx1t1 (MGP_SPRETEiJ_G0026768)
Mouse	MODERN SPECIES	13	Ubxn2b (ENSMUSG00000028243)	Cyp7a1 (ENSMUSG00000028240)	Sdcbp (ENSMUSG00000028249)	Nsmaf (ENSMUSG00000028245)	Tox (ENSMUSG00000041272)	Car8 (ENSMUSG00000041261)	Rab2a (ENSMUSG00000047187)	Chd7 (ENSMUSG00000041235)	Clvs1 (ENSMUSG00000041216)	Asph (ENSMUSG00000028207)	Gdf6 (ENSMUSG00000051279)	Cfap418 (ENSMUSG00000059482)	Plekhf2 (ENSMUSG00000049969) #19	Ndufaf6 (ENSMUSG00000050323) #20	Trp53inp1 (ENSMUSG00000028211) #21	Ccne2 (ENSMUSG00000028212) #22	Ints8 (ENSMUSG00000040738) #23	Dpy19l4 (ENSMUSG00000045205)	Esrp1 (ENSMUSG00000040728)	Virma (ENSMUSG00000040720)	Rad54b (ENSMUSG00000078773)	Fsbp (ENSMUSG00000094595)	Gem (ENSMUSG00000028214)	Cdh17 (ENSMUSG00000028217)	Pdp1 (ENSMUSG00000049225)	Tmem67 (ENSMUSG00000049488)	Rbm12b2 (ENSMUSG00000052137)	Rbm12b1 (ENSMUSG00000046667)	Cibar1 (ENSMUSG00000028218)	Triqk (ENSMUSG00000055963)	Runx1t1 (ENSMUSG00000006586)
Ryukyu mouse	MODERN SPECIES	13	Ubxn2b (MGP_CAROLIEiJ_G0025790)	Cyp7a1 (MGP_CAROLIEiJ_G0025791)	Sdcbp (MGP_CAROLIEiJ_G0025792)	Nsmaf (MGP_CAROLIEiJ_G0025793)	Tox (MGP_CAROLIEiJ_G0025794)	Car8 (MGP_CAROLIEiJ_G0025795)	Rab2a (MGP_CAROLIEiJ_G0025796)	Chd7 (MGP_CAROLIEiJ_G0025797)	Clvs1 (MGP_CAROLIEiJ_G0025798)	Asph (MGP_CAROLIEiJ_G0025799)	Gdf6 (MGP_CAROLIEiJ_G0025800)	Cfap418 (MGP_CAROLIEiJ_G0025801)	Plekhf2 (MGP_CAROLIEiJ_G0025802) #19	Ndufaf6 (MGP_CAROLIEiJ_G0025803) #20	Trp53inp1 (MGP_CAROLIEiJ_G0025804) #21	Ccne2 (MGP_CAROLIEiJ_G0025805) #22	Ints8 (MGP_CAROLIEiJ_G0025806) #23	Dpy19l4 (MGP_CAROLIEiJ_G0025807)	Esrp1 (MGP_CAROLIEiJ_G0025808)	Virma (MGP_CAROLIEiJ_G0025809)	Rad54b (MGP_CAROLIEiJ_G0025810)	Fsbp (MGP_CAROLIEiJ_G0025811)	Gem (MGP_CAROLIEiJ_G0025812)	Cdh17 (MGP_CAROLIEiJ_G0025813)	Pdp1 (MGP_CAROLIEiJ_G0025814)	Tmem67 (MGP_CAROLIEiJ_G0025815)	Cibar1 (MGP_CAROLIEiJ_G0025816)	Triqk (MGP_CAROLIEiJ_G0025818)	Runx1t1 (MGP_CAROLIEiJ_G0025819)	Slc26a7 (MGP_CAROLIEiJ_G0025820)	Lrrc69 (MGP_CAROLIEiJ_G0025821)
Shrew mouse	MODERN SPECIES	14	Ubxn2b (MGP_PahariEiJ_G0023913)	Cyp7a1 (MGP_PahariEiJ_G0023914)	Sdcbp (MGP_PahariEiJ_G0023915)	Nsmaf (MGP_PahariEiJ_G0023916)	Tox (MGP_PahariEiJ_G0023917)	Car8 (MGP_PahariEiJ_G0023918)	Rab2a (MGP_PahariEiJ_G0023919)	Chd7 (MGP_PahariEiJ_G0023920)	Clvs1 (MGP_PahariEiJ_G0023921)	Asph (MGP_PahariEiJ_G0023922)	Gdf6 (MGP_PahariEiJ_G0023923)	Cfap418 (MGP_PahariEiJ_G0023924)	Plekhf2 (MGP_PahariEiJ_G0023925) #19	Ndufaf6 (MGP_PahariEiJ_G0023926) #20	Trp53inp1 (MGP_PahariEiJ_G0023927) #21	Ccne2 (MGP_PahariEiJ_G0023928) #22	Ints8 (MGP_PahariEiJ_G0023929) #23	Dpy19l4 (MGP_PahariEiJ_G0023930)	Esrp1 (MGP_PahariEiJ_G0023931)	Virma (MGP_PahariEiJ_G0023932)	Rad54b (MGP_PahariEiJ_G0023933)	Fsbp (MGP_PahariEiJ_G0023934)	Gem (MGP_PahariEiJ_G0023935)	Cdh17 (MGP_PahariEiJ_G0023936)	Pdp1 (MGP_PahariEiJ_G0023937)	MGP_PahariEiJ_G0023938	Tmem67 (MGP_PahariEiJ_G0023939)	Cibar1 (MGP_PahariEiJ_G0023940)	Triqk (MGP_PahariEiJ_G0023941)	Runx1t1 (MGP_PahariEiJ_G0023942)	Slc26a7 (MGP_PahariEiJ_G0023943)
Rat	MODERN SPECIES	15	Nsmaf (ENSRNOG00000010234)	Tox (ENSRNOG00000010777)	Gm5471 (ENSRNOG00000033979)	Car8 (ENSRNOG00000005669)	Rab2a (ENSRNOG00000005963)	ENSRNOG00000066526	Chd7 (ENSRNOG00000006689)	Clvs1 (ENSRNOG00000006919)	Asph (ENSRNOG00000007445)	Gdf6 (ENSRNOG00000067800)	ENSRNOG00000069549	Cfap418 (ENSRNOG00000026672)	Plekhf2 (ENSRNOG00000026662) #19	Ndufaf6 (ENSRNOG00000040040) #20	Tp53inp1 (ENSRNOG00000007964) #21	Ccne2 (ENSRNOG00000008055) #22	Ints8 (ENSRNOG00000008124) #23	Dpy19l4 (ENSRNOG00000025416)	Esrp1 (ENSRNOG00000008184)	RGD1564278 (ENSRNOG00000065922)	ENSRNOG00000071120	LOC103692302 (ENSRNOG00000063229)	RGD1559441 (ENSRNOG00000067162)	LOC103692301 (ENSRNOG00000070765)	ENSRNOG00000070727	ENSRNOG00000062635	Virma (ENSRNOG00000014664)	Fsbp (ENSRNOG00000039949)	Gem (ENSRNOG00000015160)	Cdh17 (ENSRNOG00000015562)	Pdp1 (ENSRNOG00000016180)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1407					Sdc2 (ENSNGAG00000018976)	Ptdss1 (ENSNGAG00000017867)	Mterf3 (ENSNGAG00000017410)	Uqcrb (ENSNGAG00000016222)	Gdf6 (ENSNGAG00000010160)	ENSNGAG00000003573	Cfap418 (ENSNGAG00000001273)	Plekhf2 (ENSNGAG00000017849) #19	ENSNGAG00000001307	Ndufaf6 (ENSNGAG00000018726) #20	ENSNGAG00000017780 #21	Ccne2 (ENSNGAG00000014470) #22	Ints8 (ENSNGAG00000020796) #23	Dpy19l4 (ENSNGAG00000014494)	Esrp1 (ENSNGAG00000022788)	Virma (ENSNGAG00000022866)	Rad54b (ENSNGAG00000017537)	Gem (ENSNGAG00000014843)	Cdh17 (ENSNGAG00000003508)	Pdp1 (ENSNGAG00000000758)	Tmem67 (ENSNGAG00000017441)	ENSNGAG00000002801	ENSNGAG00000015508	ENSNGAG00000002585	Triqk (ENSNGAG00000013563)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	49	Nupl2 (ENSJJAG00000016370)	Gpnmb (ENSJJAG00000016316)	ENSJJAG00000024157	Igf2bp3 (ENSJJAG00000011174)	ENSJJAG00000007586	Tra2a (ENSJJAG00000022787)	ENSJJAG00000010858	Ccdc126 (ENSJJAG00000011314)	Fam221a (ENSJJAG00000023814)	Stk31 (ENSJJAG00000010464)	Npy (ENSJJAG00000002520)	ENSJJAG00000013890 #22	Pals2 (ENSJJAG00000001765)	ENSJJAG00000023312	Osbpl3 (ENSJJAG00000017704)	ENSJJAG00000016917 #22	ENSJJAG00000004363	4921507P07Rik (ENSJJAG00000011772)	Npvf (ENSJJAG00000023289)	Nfe2l3 (ENSJJAG00000013672)	ENSJJAG00000018731	ENSJJAG00000014919	Snx10 (ENSJJAG00000010400)	Skap2 (ENSJJAG00000009704)	Hoxa1 (ENSJJAG00000023032)	Hoxa2 (ENSJJAG00000021712)	ENSJJAG00000021517	Hoxa5 (ENSJJAG00000011757)	Hoxa6 (ENSJJAG00000017936)	Hoxa3 (ENSJJAG00000014001)	Hoxa7 (ENSJJAG00000001940)
Lesser Egyptian jerboa	MODERN SPECIES	49	ENSJJAG00000012041	Tomm7 (ENSJJAG00000015481)	Hycc1 (ENSJJAG00000010769)	Klhl7 (ENSJJAG00000020404)	Nupl2 (ENSJJAG00000016370)	Gpnmb (ENSJJAG00000016316)	ENSJJAG00000024157	Igf2bp3 (ENSJJAG00000011174)	ENSJJAG00000007586	Tra2a (ENSJJAG00000022787)	ENSJJAG00000010858	Ccdc126 (ENSJJAG00000011314)	Fam221a (ENSJJAG00000023814)	Stk31 (ENSJJAG00000010464)	Npy (ENSJJAG00000002520)	ENSJJAG00000013890 #22	Pals2 (ENSJJAG00000001765)	ENSJJAG00000023312	Osbpl3 (ENSJJAG00000017704)	ENSJJAG00000016917 #22	ENSJJAG00000004363	4921507P07Rik (ENSJJAG00000011772)	Npvf (ENSJJAG00000023289)	Nfe2l3 (ENSJJAG00000013672)	ENSJJAG00000018731	ENSJJAG00000014919	Snx10 (ENSJJAG00000010400)	Skap2 (ENSJJAG00000009704)	Hoxa1 (ENSJJAG00000023032)	Hoxa2 (ENSJJAG00000021712)	ENSJJAG00000021517
Lesser Egyptian jerboa	MODERN SPECIES	61	Trim14 (ENSJJAG00000019629)	Nans (ENSJJAG00000017140)	ENSJJAG00000018447	Trmo (ENSJJAG00000013904)	Xpa (ENSJJAG00000021732)	Sdc2 (ENSJJAG00000019670)	Ptdss1 (ENSJJAG00000020867)	ENSJJAG00000022904	ENSJJAG00000011745	Uqcrb (ENSJJAG00000019658)	Gdf6 (ENSJJAG00000016433)	ENSJJAG00000022813	Ndufaf6 (ENSJJAG00000021214) #20	ENSJJAG00000004025	Trp53inp1 (ENSJJAG00000000693) #21	ENSJJAG00000008698 #22	Ints8 (ENSJJAG00000006447) #23	Dpy19l4 (ENSJJAG00000010845)	Esrp1 (ENSJJAG00000002006)	Virma (ENSJJAG00000024245)	Rad54b (ENSJJAG00000010314)	Gem (ENSJJAG00000024345)	Cdh17 (ENSJJAG00000011121)	Tmem67 (ENSJJAG00000015625)	ENSJJAG00000004165	Cibar1 (ENSJJAG00000023978)	Triqk (ENSJJAG00000017357)	Slc26a7 (ENSJJAG00000007243)	ENSJJAG00000010380	Calb1 (ENSJJAG00000009685)	Nbn (ENSJJAG00000018109)
Kangaroo rat	MODERN SPECIES	336	Matn2 (ENSDORG00000001226)	Laptm4b (ENSDORG00000026371)	Mtdh (ENSDORG00000004411)	Tspyl5 (ENSDORG00000015407)	Cpq (ENSDORG00000015406)	ENSDORG00000024009	Sdc2 (ENSDORG00000023682)	Ptdss1 (ENSDORG00000010478)	Mterf3 (ENSDORG00000010477)	ENSDORG00000029076	Gdf6 (ENSDORG00000015302)	Cfap418 (ENSDORG00000003246)	Plekhf2 (ENSDORG00000027911) #19	Ndufaf6 (ENSDORG00000012426) #20	Trp53inp1 (ENSDORG00000023784) #21	Ccne2 (ENSDORG00000014957) #22	Ints8 (ENSDORG00000014954) #23	Dpy19l4 (ENSDORG00000004016)	Esrp1 (ENSDORG00000011987)	ENSDORG00000024142	Virma (ENSDORG00000002324)	Rad54b (ENSDORG00000002492)	Fsbp (ENSDORG00000024906)	Gem (ENSDORG00000003903)	Pdp1 (ENSDORG00000015533)	Tmem67 (ENSDORG00000004149)	ENSDORG00000024034	Cibar1 (ENSDORG00000028815)	Triqk (ENSDORG00000028174)	Runx1t1 (ENSDORG00000013545)	ENSDORG00000024490
Tree shrew	MODERN SPECIES	3277													PLEKHF2 (ENSTBEG00000017340) #19	ENSTBEG00000017187	TP53INP1 (ENSTBEG00000017074) #21	CCNE2 (ENSTBEG00000016919) #22	INTS8 (ENSTBEG00000016596) #23
Primates	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01030000234950	ENSGT00510000055281	ENSGT00390000017350
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT01030000234950
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00730000111146.p	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT01030000234950
Lemuriformes_a	ANCESTRAL SPECIES	46	ENSGT00730000111146.p	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT01030000234950	ENSGT00950000183176.b.f
Greater bamboo lemur	MODERN SPECIES	27					CPQ (ENSPSMG00000019113)	ENSPSMG00000019099	SDC2 (ENSPSMG00000019085)	PTDSS1 (ENSPSMG00000019059)	MTERF3 (ENSPSMG00000019021)	UQCRB (ENSPSMG00000018978)	GDF6 (ENSPSMG00000018968)	CFAP418 (ENSPSMG00000018962)	PLEKHF2 (ENSPSMG00000018959) #19	NDUFAF6 (ENSPSMG00000018956) #20	TP53INP1 (ENSPSMG00000018946) #21	CCNE2 (ENSPSMG00000018924) #22	INTS8 (ENSPSMG00000018853) #23	DPY19L4 (ENSPSMG00000018792)	ESRP1 (ENSPSMG00000018737)	ENSPSMG00000018677	RAD54B (ENSPSMG00000018667)	GEM (ENSPSMG00000018645)	CDH17 (ENSPSMG00000018613)	PDP1 (ENSPSMG00000018574)	TMEM67 (ENSPSMG00000018566)	RBM12B (ENSPSMG00000018547)	CIBAR1 (ENSPSMG00000018531)	TRIQK (ENSPSMG00000018489)	ENSPSMG00000018479	RUNX1T1 (ENSPSMG00000018149)	SLC26A7 (ENSPSMG00000017864)
Coquerels sifaka	MODERN SPECIES	288	ENSPCOG00000022716	RPL30 (ENSPCOG00000016608)	MATN2 (ENSPCOG00000028802)	LAPTM4B (ENSPCOG00000024247)	MTDH (ENSPCOG00000014642)	CPQ (ENSPCOG00000013230)	SDC2 (ENSPCOG00000025635)	PTDSS1 (ENSPCOG00000012653)	MTERF3 (ENSPCOG00000024551)	UQCRB (ENSPCOG00000024949)	GDF6 (ENSPCOG00000025088)	CFAP418 (ENSPCOG00000015919)	PLEKHF2 (ENSPCOG00000012595) #19	NDUFAF6 (ENSPCOG00000027319) #20	TP53INP1 (ENSPCOG00000023641) #21	CCNE2 (ENSPCOG00000014969) #22	INTS8 (ENSPCOG00000020141) #23	DPY19L4 (ENSPCOG00000015925)	ESRP1 (ENSPCOG00000024697)	ENSPCOG00000027926	VIRMA (ENSPCOG00000018311)	RAD54B (ENSPCOG00000026845)	CDH17 (ENSPCOG00000017142)	PDP1 (ENSPCOG00000018400)	TMEM67 (ENSPCOG00000024483)	RBM12B (ENSPCOG00000023546)	CIBAR1 (ENSPCOG00000026231)	ENSPCOG00000001560	RUNX1T1 (ENSPCOG00000018823)	SLC26A7 (ENSPCOG00000013146)	LRRC69 (ENSPCOG00000023910)
Mouse lemur	MODERN SPECIES	31	ENSMICG00000044005	LAPTM4B (ENSMICG00000038044)	ENSMICG00000010589	ENSMICG00000033375	CPQ (ENSMICG00000047973)	SDC2 (ENSMICG00000011766)	PTDSS1 (ENSMICG00000009427)	MTERF3 (ENSMICG00000033467)	ENSMICG00000034273	GDF6 (ENSMICG00000029531)	CFAP418 (ENSMICG00000004581)	ENSMICG00000032107	PLEKHF2 (ENSMICG00000045232) #19	NDUFAF6 (ENSMICG00000036619) #20	TP53INP1 (ENSMICG00000047023) #21	CCNE2 (ENSMICG00000015598) #22	INTS8 (ENSMICG00000015571) #23	DPY19L4 (ENSMICG00000034944)	ESRP1 (ENSMICG00000008757)	VIRMA (ENSMICG00000002218)	FSBP (ENSMICG00000035643)	RAD54B (ENSMICG00000000754)	GEM (ENSMICG00000043148)	CDH17 (ENSMICG00000015201)	PDP1 (ENSMICG00000015194)	TMEM67 (ENSMICG00000015167)	RBM12B (ENSMICG00000036969)	CIBAR1 (ENSMICG00000006797)	TRIQK (ENSMICG00000046319)	RUNX1T1 (ENSMICG00000015825)	SLC26A7 (ENSMICG00000012285)
Bushbaby	MODERN SPECIES	119	MTDH (ENSOGAG00000002065)	TSPYL5 (ENSOGAG00000025044)	CPQ (ENSOGAG00000014871)	ENSOGAG00000027986	SDC2 (ENSOGAG00000014867)	ENSOGAG00000034918	PTDSS1 (ENSOGAG00000004305)	MTERF3 (ENSOGAG00000004303)	UQCRB (ENSOGAG00000004302)	GDF6 (ENSOGAG00000034193)	CFAP418 (ENSOGAG00000007222)	PLEKHF2 (ENSOGAG00000015131) #19	ENSOGAG00000030916	NDUFAF6 (ENSOGAG00000028131) #20	TP53INP1 (ENSOGAG00000008871) #21	CCNE2 (ENSOGAG00000034667) #22	INTS8 (ENSOGAG00000008861) #23	DPY19L4 (ENSOGAG00000001710)	ESRP1 (ENSOGAG00000000917)	ENSOGAG00000025900	VIRMA (ENSOGAG00000013555)	RAD54B (ENSOGAG00000007854)	FSBP (ENSOGAG00000007859)	GEM (ENSOGAG00000007849)	CDH17 (ENSOGAG00000002985)	PDP1 (ENSOGAG00000002984)	TMEM67 (ENSOGAG00000002980)	RBM12B (ENSOGAG00000002979)	CIBAR1 (ENSOGAG00000002972)	ENSOGAG00000029864	ENSOGAG00000027889
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Tarsier	MODERN SPECIES	7306																CCNE2 (ENSTSYG00000012274) #22	INTS8 (ENSTSYG00000012225) #23
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00510000055281	ENSGT00390000017350	ENSGT00950000183176.b.f
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000158008	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00510000055281	ENSGT00390000017350
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00910000148337	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a.r	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c.`c.a	ENSGT00390000017350	ENSGT00510000055281
Hominidae	ANCESTRAL SPECIES	15	ENSGT00390000015318.c	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a.r	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c.`c.a	ENSGT00510000055281	ENSGT00390000017350
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000158008	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a.r	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00910000148603	ENSGT00390000010285.c.`c.a	ENSGT00510000055281
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000158008	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a.r	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00910000148603	ENSGT00390000010285.c.`c.a	ENSGT00390000017350
Pan	ANCESTRAL SPECIES	11	ENSGT00390000015318.c	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a.r	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00910000148603	ENSGT00390000010285.c.`c.a	ENSGT00390000017350	ENSGT00950000183176.b.f
Bonobo	MODERN SPECIES	21	ENSPPAG00000037414	LAPTM4B (ENSPPAG00000036266)	MTDH (ENSPPAG00000029418)	ENSPPAG00000039769	CPQ (ENSPPAG00000033367)	SDC2 (ENSPPAG00000034461)	PTDSS1 (ENSPPAG00000038964)	MTERF3 (ENSPPAG00000030040)	UQCRB (ENSPPAG00000028159)	ENSPPAG00000036242	ENSPPAG00000034642	CFAP418 (ENSPPAG00000038170)	PLEKHF2 (ENSPPAG00000022371) #19	NDUFAF6 (ENSPPAG00000000905) #20	TP53INP1 (ENSPPAG00000035943) #21	CCNE2 (ENSPPAG00000028603) #22	INTS8 (ENSPPAG00000033161) #23	DPY19L4 (ENSPPAG00000039378)	ESRP1 (ENSPPAG00000037294)	VIRMA (ENSPPAG00000032721)	RAD54B (ENSPPAG00000029572)	GEM (ENSPPAG00000024586)	CDH17 (ENSPPAG00000036344)	ENSPPAG00000035912	PDP1 (ENSPPAG00000026907)	ENSPPAG00000012789	TMEM67 (ENSPPAG00000029467)	ENSPPAG00000042794	CIBAR1 (ENSPPAG00000042855)	TRIQK (ENSPPAG00000002158)	RUNX1T1 (ENSPPAG00000031370)
Chimpanzee	MODERN SPECIES	21	ENSPTRG00000046478	LAPTM4B (ENSPTRG00000020448)	MTDH (ENSPTRG00000020447)	TSPYL5 (ENSPTRG00000020445)	CPQ (ENSPTRG00000020444)	SDC2 (ENSPTRG00000020443)	PTDSS1 (ENSPTRG00000020442)	MTERF3 (ENSPTRG00000020441)	UQCRB (ENSPTRG00000020440)	GDF6 (ENSPTRG00000020439)	ENSPTRG00000042807	CFAP418 (ENSPTRG00000020437)	PLEKHF2 (ENSPTRG00000044161) #19	NDUFAF6 (ENSPTRG00000030965) #20	TP53INP1 (ENSPTRG00000020435) #21	CCNE2 (ENSPTRG00000020433) #22	INTS8 (ENSPTRG00000020432) #23	DPY19L4 (ENSPTRG00000020431)	ESRP1 (ENSPTRG00000020430)	VIRMA (ENSPTRG00000020428)	RAD54B (ENSPTRG00000020427)	GEM (ENSPTRG00000020426)	CDH17 (ENSPTRG00000020425)	ENSPTRG00000049145	PDP1 (ENSPTRG00000020424)	ENSPTRG00000050680	TMEM67 (ENSPTRG00000020422)	RBM12B (ENSPTRG00000020420)	ENSPTRG00000050149	ENSPTRG00000044420	TRIQK (ENSPTRG00000049470)
Human	MODERN SPECIES	20	RPL30 (ENSG00000156482)	MATN2 (ENSG00000132561)	LAPTM4B (ENSG00000104341)	MTDH (ENSG00000147649)	TSPYL5 (ENSG00000180543)	CPQ (ENSG00000104324)	SDC2 (ENSG00000169439)	PTDSS1 (ENSG00000156471)	MTERF3 (ENSG00000156469)	UQCRB (ENSG00000156467)	GDF6 (ENSG00000156466)	CFAP418 (ENSG00000156172)	PLEKHF2 (ENSG00000175895) #19	TP53INP1 (ENSG00000164938) #21	NDUFAF6 (ENSG00000156170) #20	CCNE2 (ENSG00000175305) #22	INTS8 (ENSG00000164941) #23	DPY19L4 (ENSG00000156162)	ESRP1 (ENSG00000104413)	VIRMA (ENSG00000164944)	FSBP (ENSG00000265817)	RAD54B (ENSG00000197275)	GEM (ENSG00000164949)	CDH17 (ENSG00000079112)	PDP1 (ENSG00000164951)	TMEM67 (ENSG00000164953)	RBM12B (ENSG00000183808)	CIBAR1 (ENSG00000188343)	TRIQK (ENSG00000205133)	RUNX1T1 (ENSG00000079102)	SLC26A7 (ENSG00000147606)
Gorilla	MODERN SPECIES	21	ENSGGOG00000036904	ENSGGOG00000000543	MTDH (ENSGGOG00000000539)	TSPYL5 (ENSGGOG00000011250)	CPQ (ENSGGOG00000004762)	SDC2 (ENSGGOG00000011398)	PTDSS1 (ENSGGOG00000022232)	MTERF3 (ENSGGOG00000011535)	ENSGGOG00000026528	GDF6 (ENSGGOG00000023170)	ENSGGOG00000037972	CFAP418 (ENSGGOG00000007824)	PLEKHF2 (ENSGGOG00000022351) #19	NDUFAF6 (ENSGGOG00000008150) #20	TP53INP1 (ENSGGOG00000009191) #21	CCNE2 (ENSGGOG00000014935) #22	INTS8 (ENSGGOG00000005424) #23	DPY19L4 (ENSGGOG00000014179)	ESRP1 (ENSGGOG00000003627)	VIRMA (ENSGGOG00000006855)	RAD54B (ENSGGOG00000023516)	GEM (ENSGGOG00000013020)	CDH17 (ENSGGOG00000012331)	ENSGGOG00000036876	PDP1 (ENSGGOG00000027042)	TMEM67 (ENSGGOG00000027426)	RBM12B (ENSGGOG00000011909)	ENSGGOG00000022248	CIBAR1 (ENSGGOG00000006452)	ENSGGOG00000025746	TRIQK (ENSGGOG00000041672)
Orangutan	MODERN SPECIES	21	ENSPPYG00000038790	ENSPPYG00000018771	MTDH (ENSPPYG00000018770)	TSPYL5 (ENSPPYG00000018769)	CPQ (ENSPPYG00000018768)	SDC2 (ENSPPYG00000032941)	PTDSS1 (ENSPPYG00000041357)	MTERF3 (ENSPPYG00000018764)	UQCRB (ENSPPYG00000018763)	GDF6 (ENSPPYG00000018762)	ENSPPYG00000037604	ENSPPYG00000018761	PLEKHF2 (ENSPPYG00000018760) #19	NDUFAF6 (ENSPPYG00000018759) #20	TP53INP1 (ENSPPYG00000040092) #21	CCNE2 (ENSPPYG00000018757) #22	INTS8 (ENSPPYG00000018756) #23	DPY19L4 (ENSPPYG00000018755)	ESRP1 (ENSPPYG00000018753)	ENSPPYG00000037538	VIRMA (ENSPPYG00000018751)	RAD54B (ENSPPYG00000018750)	GEM (ENSPPYG00000018749)	CDH17 (ENSPPYG00000018748)	PDP1 (ENSPPYG00000018747)	TMEM67 (ENSPPYG00000018746)	RBM12B (ENSPPYG00000018745)	CIBAR1 (ENSPPYG00000018744)	TRIQK (ENSPPYG00000018743)	RUNX1T1 (ENSPPYG00000018741)	SLC26A7 (ENSPPYG00000018740)
Gibbon	MODERN SPECIES	6	MTDH (ENSNLEG00000003705)	ENSNLEG00000032823	CPQ (ENSNLEG00000003680)	ENSNLEG00000028984	SDC2 (ENSNLEG00000003657)	PTDSS1 (ENSNLEG00000003615)	MTERF3 (ENSNLEG00000003582)	ENSNLEG00000034358	GDF6 (ENSNLEG00000003567)	ENSNLEG00000031768	ENSNLEG00000032073	CFAP418 (ENSNLEG00000031356)	PLEKHF2 (ENSNLEG00000035497) #19	NDUFAF6 (ENSNLEG00000003540) #20	TP53INP1 (ENSNLEG00000003526) #21	CCNE2 (ENSNLEG00000003483) #22	INTS8 (ENSNLEG00000003354) #23	DPY19L4 (ENSNLEG00000003347)	ESRP1 (ENSNLEG00000003241)	VIRMA (ENSNLEG00000003151)	RAD54B (ENSNLEG00000003062)	GEM (ENSNLEG00000003045)	CDH17 (ENSNLEG00000002974)	PDP1 (ENSNLEG00000002967)	ENSNLEG00000033649	TMEM67 (ENSNLEG00000002783)	RBM12B (ENSNLEG00000032050)	ENSNLEG00000002773	TRIQK (ENSNLEG00000002765)	ENSNLEG00000027770	RUNX1T1 (ENSNLEG00000002658)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00550000074784.a.b	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00550000074784.a.b	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281
Vervet Monkey	MODERN SPECIES	27	LAPTM4B (ENSCSAG00000012372)	MTDH (ENSCSAG00000012378)	ENSCSAG00000018600	TSPYL5 (ENSCSAG00000018598)	CPQ (ENSCSAG00000012387)	SDC2 (ENSCSAG00000012405)	ENSCSAG00000018596	PTDSS1 (ENSCSAG00000012419)	MTERF3 (ENSCSAG00000012442)	UQCRB (ENSCSAG00000012458)	GDF6 (ENSCSAG00000012469)	CFAP418 (ENSCSAG00000012476)	PLEKHF2 (ENSCSAG00000018593) #19	NDUFAF6 (ENSCSAG00000012506) #20	TP53INP1 (ENSCSAG00000012511) #21	CCNE2 (ENSCSAG00000012517) #22	INTS8 (ENSCSAG00000012536) #23	DPY19L4 (ENSCSAG00000012593)	ESRP1 (ENSCSAG00000012644)	VIRMA (ENSCSAG00000012660)	FSBP (ENSCSAG00000012665)	RAD54B (ENSCSAG00000012712)	ENSCSAG00000018591	GEM (ENSCSAG00000012731)	CDH17 (ENSCSAG00000012742)	PDP1 (ENSCSAG00000012754)	TMEM67 (ENSCSAG00000012763)	ENSCSAG00000018560	RBM12B (ENSCSAG00000018559)	CIBAR1 (ENSCSAG00000012774)	TRIQK (ENSCSAG00000012785)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00550000074784.a.b	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT01030000234916	ENSGT00940000153446.a.a.q.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Cercopithecinae_d	ANCESTRAL SPECIES	92	ENSGT00940000153446.a.a.q.b	ENSGT00940000153097.A.e.a.a.b.a.a.e.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00390000008294.e.a	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f
Sooty mangabey	MODERN SPECIES	658	LAPTM4B (ENSCATG00000041068)	ENSCATG00000019683	MTDH (ENSCATG00000036029)	TSPYL5 (ENSCATG00000043927)	CPQ (ENSCATG00000030965)	SDC2 (ENSCATG00000038383)	PTDSS1 (ENSCATG00000033905)	MTERF3 (ENSCATG00000012833)	ENSCATG00000032741	GDF6 (ENSCATG00000044163)	ENSCATG00000040078	CFAP418 (ENSCATG00000042382)	PLEKHF2 (ENSCATG00000003149) #19	NDUFAF6 (ENSCATG00000030140) #20	TP53INP1 (ENSCATG00000003063) #21	CCNE2 (ENSCATG00000045094) #22	INTS8 (ENSCATG00000035060) #23	DPY19L4 (ENSCATG00000017771)	ESRP1 (ENSCATG00000038739)	VIRMA (ENSCATG00000043446)	RAD54B (ENSCATG00000030661)	ENSCATG00000043242	GEM (ENSCATG00000032814)	CDH17 (ENSCATG00000032530)	ENSCATG00000039742	PDP1 (ENSCATG00000026851)	TMEM67 (ENSCATG00000038457)	RBM12B (ENSCATG00000030769)	CIBAR1 (ENSCATG00000012539)	TRIQK (ENSCATG00000031074)	RUNX1T1 (ENSCATG00000016868)
Drill	MODERN SPECIES	744					ENSMLEG00000035050	SDC2 (ENSMLEG00000040166)	PTDSS1 (ENSMLEG00000030384)	MTERF3 (ENSMLEG00000029214)	ENSMLEG00000017983	ENSMLEG00000035468	CFAP418 (ENSMLEG00000043433)	PLEKHF2 (ENSMLEG00000000658) #19	NDUFAF6 (ENSMLEG00000039390) #20	ENSMLEG00000010314	TP53INP1 (ENSMLEG00000033824) #21	CCNE2 (ENSMLEG00000031183) #22	INTS8 (ENSMLEG00000036088) #23	DPY19L4 (ENSMLEG00000041642)	ESRP1 (ENSMLEG00000015475)	VIRMA (ENSMLEG00000033647)	RAD54B (ENSMLEG00000006946)	GEM (ENSMLEG00000030970)	CDH17 (ENSMLEG00000025852)	ENSMLEG00000026827	PDP1 (ENSMLEG00000039161)	TMEM67 (ENSMLEG00000035574)	RBM12B (ENSMLEG00000037288)	ENSMLEG00000043029	TRIQK (ENSMLEG00000030472)	RUNX1T1 (ENSMLEG00000034551)
Olive baboon	MODERN SPECIES	18	MTDH (ENSPANG00000007132)	ENSPANG00000043352	ENSPANG00000046257	ENSPANG00000045305	TSPYL5 (ENSPANG00000011310)	CPQ (ENSPANG00000038817)	SDC2 (ENSPANG00000017837)	PTDSS1 (ENSPANG00000008476)	MTERF3 (ENSPANG00000000418)	ENSPANG00000033407	GDF6 (ENSPANG00000000417)	CFAP418 (ENSPANG00000004422)	PLEKHF2 (ENSPANG00000016807) #19	NDUFAF6 (ENSPANG00000016247) #20	TP53INP1 (ENSPANG00000019675) #21	CCNE2 (ENSPANG00000000488) #22	INTS8 (ENSPANG00000004180) #23	DPY19L4 (ENSPANG00000007133)	ESRP1 (ENSPANG00000011078)	ENSPANG00000037416	ENSPANG00000047579	ENSPANG00000043666	VIRMA (ENSPANG00000017809)	ENSPANG00000002488	RAD54B (ENSPANG00000019566)	ENSPANG00000043038	GEM (ENSPANG00000017240)	CDH17 (ENSPANG00000017130)	PDP1 (ENSPANG00000011147)	TMEM67 (ENSPANG00000009489)	RBM12B (ENSPANG00000035535)
Macaca	ANCESTRAL SPECIES	14	ENSGT00550000074784.a.b	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Pig-tailed macaque	MODERN SPECIES	248	CD37 (ENSMNEG00000040079)	SLC6A16 (ENSMNEG00000032765)	ENSMNEG00000031663	TRPM4 (ENSMNEG00000044458)	HRC (ENSMNEG00000032961)	PPFIA3 (ENSMNEG00000044190)	LIN7B (ENSMNEG00000036207)	SNRNP70 (ENSMNEG00000038057)	KCNA7 (ENSMNEG00000036415)	NTF4 (ENSMNEG00000008451)	ENSMNEG00000029682	RUVBL2 (ENSMNEG00000035982)	ENSMNEG00000036413	LHB (ENSMNEG00000038560)	TP53INP1 (ENSMNEG00000028730) #21	CCNE2 (ENSMNEG00000035282) #22	INTS8 (ENSMNEG00000032790) #23	DPY19L4 (ENSMNEG00000032177)	ESRP1 (ENSMNEG00000034691)	ENSMNEG00000028615	VIRMA (ENSMNEG00000041558)	RAD54B (ENSMNEG00000016408)	GEM (ENSMNEG00000042526)	CDH17 (ENSMNEG00000030028)	PDP1 (ENSMNEG00000033800)	TMEM67 (ENSMNEG00000041340)	RBM12B (ENSMNEG00000041292)	CIBAR1 (ENSMNEG00000034831)	TRIQK (ENSMNEG00000030105)	ENSMNEG00000017861	RUNX1T1 (ENSMNEG00000042108)
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00940000153446.a.a.q.b	ENSGT00940000154181.a	ENSGT01030000236289.a.a.b	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h.b	ENSGT00940000162274	ENSGT00910000147004	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b	ENSGT00390000012840
Rhesus	MODERN SPECIES	18	LAPTM4B (ENSMMUG00000008926)	MTDH (ENSMMUG00000014210)	ENSMMUG00000055454	TSPYL5 (ENSMMUG00000062721)	ENSMMUG00000058134	CPQ (ENSMMUG00000003878)	SDC2 (ENSMMUG00000000963)	PTDSS1 (ENSMMUG00000000573)	MTERF3 (ENSMMUG00000008808)	UQCRB (ENSMMUG00000008804)	GDF6 (ENSMMUG00000065198)	CFAP418 (ENSMMUG00000016496)	PLEKHF2 (ENSMMUG00000014183) #19	NDUFAF6 (ENSMMUG00000014802) #20	TP53INP1 (ENSMMUG00000057219) #21	CCNE2 (ENSMMUG00000005358) #22	INTS8 (ENSMMUG00000005356) #23	DPY19L4 (ENSMMUG00000021113)	ESRP1 (ENSMMUG00000021112)	VIRMA (ENSMMUG00000012981)	ENSMMUG00000061159	FSBP (ENSMMUG00000052407)	RAD54B (ENSMMUG00000005659)	GEM (ENSMMUG00000062934)	CDH17 (ENSMMUG00000020010)	ENSMMUG00000047716	PDP1 (ENSMMUG00000004568)	TMEM67 (ENSMMUG00000005561)	RBM12B (ENSMMUG00000005558)	CIBAR1 (ENSMMUG00000005557)	RUNX1T1 (ENSMMUG00000023115)
Crab-eating macaque	MODERN SPECIES	18	ENSMFAG00000058643	TSPYL5 (ENSMFAG00000030843)	ENSMFAG00000059981	CPQ (ENSMFAG00000003103)	SDC2 (ENSMFAG00000041222)	PTDSS1 (ENSMFAG00000034149)	MTERF3 (ENSMFAG00000042157)	ENSMFAG00000025927	GDF6 (ENSMFAG00000039122)	ENSMFAG00000047700	ENSMFAG00000050289	CFAP418 (ENSMFAG00000044442)	PLEKHF2 (ENSMFAG00000050051) #19	NDUFAF6 (ENSMFAG00000001562) #20	TP53INP1 (ENSMFAG00000059313) #21	CCNE2 (ENSMFAG00000036525) #22	INTS8 (ENSMFAG00000036370) #23	ENSMFAG00000051821	ENSMFAG00000061242	ENSMFAG00000063260	DPY19L4 (ENSMFAG00000001092)	ESRP1 (ENSMFAG00000031577)	VIRMA (ENSMFAG00000041706)	RAD54B (ENSMFAG00000031629)	ENSMFAG00000056677	GEM (ENSMFAG00000028496)	CDH17 (ENSMFAG00000000602)	PDP1 (ENSMFAG00000030624)	ENSMFAG00000048314	TMEM67 (ENSMFAG00000002808)	RBM12B (ENSMFAG00000045430)
Rhinopithecus	ANCESTRAL SPECIES	633												ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597.b #23
Golden snub-nosed monkey	MODERN SPECIES	900												CFAP418 (ENSRROG00000033017)	PLEKHF2 (ENSRROG00000020905) #19	NDUFAF6 (ENSRROG00000006785) #20	TP53INP1 (ENSRROG00000034052) #21	CCNE2 (ENSRROG00000032988) #22	INTS8 (ENSRROG00000040702) #23
Black snub-nosed monkey	MODERN SPECIES	928											ENSRBIG00000039955	CFAP418 (ENSRBIG00000029265)	PLEKHF2 (ENSRBIG00000010351) #19	NDUFAF6 (ENSRBIG00000039557) #20	TP53INP1 (ENSRBIG00000037189) #21	CCNE2 (ENSRBIG00000040726) #22	INTS8 (ENSRBIG00000044162) #23	SOAT1 (ENSRBIG00000030974)	AXDND1 (ENSRBIG00000035595)	ENSRBIG00000003937	NPHS2 (ENSRBIG00000026851)	TDRD5 (ENSRBIG00000027790)	FAM163A (ENSRBIG00000044088)	TOR1AIP2 (ENSRBIG00000031775)	TOR1AIP1 (ENSRBIG00000001038)	CEP350 (ENSRBIG00000029021)	ENSRBIG00000029528	ENSRBIG00000024994	QSOX1 (ENSRBIG00000035875)	ENSRBIG00000014697	LHX4 (ENSRBIG00000032888)
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.a.a.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00940000154349.m.a.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Cebidae	ANCESTRAL SPECIES	19	ENSGT00390000010783	ENSGT00390000012138.a.b.t	ENSGT00940000158008	ENSGT00940000153446.a.a.q.a.a.a.a	ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00940000154349.m.a.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Cebidae_a	ANCESTRAL SPECIES	61					ENSGT00940000154181.a	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.h	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00940000154349.m.a.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Capuchin	MODERN SPECIES	109												CFAP418 (ENSCCAG00000029098)	PLEKHF2 (ENSCCAG00000019372) #19	NDUFAF6 (ENSCCAG00000030934) #20	TP53INP1 (ENSCCAG00000026030) #21	CCNE2 (ENSCCAG00000020230) #22	INTS8 (ENSCCAG00000037448) #23	ENSCCAG00000028912	DPY19L4 (ENSCCAG00000032282)	ENSCCAG00000028859	ESRP1 (ENSCCAG00000021066)	ENSCCAG00000009664	VIRMA (ENSCCAG00000036600)	RAD54B (ENSCCAG00000011754)	GEM (ENSCCAG00000005600)	CDH17 (ENSCCAG00000028997)	ENSCCAG00000033599	PDP1 (ENSCCAG00000036931)	ENSCCAG00000021460	TMEM67 (ENSCCAG00000026829)	CIBAR1 (ENSCCAG00000034321)
Bolivian squirrel monkey	MODERN SPECIES	149	ENSSBOG00000024044	ENSSBOG00000036297	HAPSTR1 (ENSSBOG00000025372)	MTDH (ENSSBOG00000028388)	CPQ (ENSSBOG00000028409)	SDC2 (ENSSBOG00000028645)	ENSSBOG00000004527	PTDSS1 (ENSSBOG00000024854)	MTERF3 (ENSSBOG00000027056)	ENSSBOG00000034518	GDF6 (ENSSBOG00000022237)	CFAP418 (ENSSBOG00000010195)	PLEKHF2 (ENSSBOG00000016012) #19	NDUFAF6 (ENSSBOG00000022551) #20	TP53INP1 (ENSSBOG00000024035) #21	CCNE2 (ENSSBOG00000028124) #22	INTS8 (ENSSBOG00000027144) #23	DPY19L4 (ENSSBOG00000019201)	ENSSBOG00000028412	ESRP1 (ENSSBOG00000032197)	ENSSBOG00000024983	VIRMA (ENSSBOG00000009952)	RAD54B (ENSSBOG00000028501)	GEM (ENSSBOG00000025054)	CDH17 (ENSSBOG00000019928)	ENSSBOG00000028103	PDP1 (ENSSBOG00000030441)	ENSSBOG00000013924	TMEM67 (ENSSBOG00000023940)	RBM12B (ENSSBOG00000027592)	CIBAR1 (ENSSBOG00000030888)
Marmoset	MODERN SPECIES	7	PTDSS1 (ENSCJAG00000038465)	MTERF3 (ENSCJAG00000020561)	ENSCJAG00000020560	ENSCJAG00000077581	GDF6 (ENSCJAG00000073278)	ENSCJAG00000080480	ENSCJAG00000073245	ENSCJAG00000079243	CFAP418 (ENSCJAG00000047965)	PLEKHF2 (ENSCJAG00000047758) #19	NDUFAF6 (ENSCJAG00000005958) #20	ENSCJAG00000073376	ENSCJAG00000071339	TP53INP1 (ENSCJAG00000042074) #21	INTS8 (ENSCJAG00000000015) #23	CCNE2 (ENSCJAG00000000011) #22	ENSCJAG00000056343	DPY19L4 (ENSCJAG00000000034)	ESRP1 (ENSCJAG00000000043)	VIRMA (ENSCJAG00000000064)	RAD54B (ENSCJAG00000000080)	GEM (ENSCJAG00000000088)	CDH17 (ENSCJAG00000000090)	ENSCJAG00000075221	PDP1 (ENSCJAG00000053295)	TMEM67 (ENSCJAG00000000105)	RBM12B (ENSCJAG00000000124)	CIBAR1 (ENSCJAG00000000126)	ENSCJAG00000000131	ENSCJAG00000012130	TRIQK (ENSCJAG00000038595)
Mas night monkey	MODERN SPECIES	702	ENSANAG00000023832	ENSANAG00000028165	MTDH (ENSANAG00000030929)	CPQ (ENSANAG00000022385)	SDC2 (ENSANAG00000029849)	PTDSS1 (ENSANAG00000021585)	MTERF3 (ENSANAG00000031075)	ENSANAG00000022818	GDF6 (ENSANAG00000029322)	CFAP418 (ENSANAG00000020634)	ENSANAG00000019092 #19	ENSANAG00000023822	NDUFAF6 (ENSANAG00000034356) #20	ENSANAG00000020067	TP53INP1 (ENSANAG00000034338) #21	CCNE2 (ENSANAG00000020751) #22
Laurasiatheria	ANCESTRAL SPECIES	18	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916	ENSGT01100000264651	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Laurasiatheria_a	ANCESTRAL SPECIES	20	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a	ENSGT00390000012916.y.b	ENSGT01100000264651	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Suina	ANCESTRAL SPECIES	26	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b	ENSGT00940000164066
Pig	MODERN SPECIES	12	MATN2 (ENSSSCG00000006082)	LAPTM4B (ENSSSCG00000006083)	MTDH (ENSSSCG00000006084)	TSPYL5 (ENSSSCG00000033112)	CPQ (ENSSSCG00000006087)	SDC2 (ENSSSCG00000006088)	PTDSS1 (ENSSSCG00000006089)	MTERF3 (ENSSSCG00000006090)	UQCRB (ENSSSCG00000055783)	GDF6 (ENSSSCG00000034943)	ENSSSCG00000049545	CFAP418 (ENSSSCG00000034398)	PLEKHF2 (ENSSSCG00000039549) #19	NDUFAF6 (ENSSSCG00000006093) #20	TP53INP1 (ENSSSCG00000034321) #21	CCNE2 (ENSSSCG00000006095) #22	INTS8 (ENSSSCG00000006096) #23	DPY19L4 (ENSSSCG00000006098)	ESRP1 (ENSSSCG00000006099)	VIRMA (ENSSSCG00000006100)	RAD54B (ENSSSCG00000024290)	GEM (ENSSSCG00000006105)	CDH17 (ENSSSCG00000006106)	PDP1 (ENSSSCG00000006107)	TMEM67 (ENSSSCG00000006108)	RBM12B (ENSSSCG00000006110)	ENSSSCG00000053596	ENSSSCG00000037963	ENSSSCG00000060461	TRIQK (ENSSSCG00000037733)	ENSSSCG00000046234
Chacoan peccary	MODERN SPECIES	113	RPL30 (ENSCWAG00000013516)	MATN2 (ENSCWAG00000013418)	LAPTM4B (ENSCWAG00000013348)	MTDH (ENSCWAG00000013207)	TSPYL5 (ENSCWAG00000013175)	CPQ (ENSCWAG00000013136)	SDC2 (ENSCWAG00000013078)	PTDSS1 (ENSCWAG00000013029)	MTERF3 (ENSCWAG00000012957)	ENSCWAG00000012911	GDF6 (ENSCWAG00000012867)	CFAP418 (ENSCWAG00000012828)	PLEKHF2 (ENSCWAG00000012800) #19	NDUFAF6 (ENSCWAG00000012622) #20	TP53INP1 (ENSCWAG00000012557) #21	CCNE2 (ENSCWAG00000012395) #22	INTS8 (ENSCWAG00000012247) #23	DPY19L4 (ENSCWAG00000012168)	ESRP1 (ENSCWAG00000010750)	VIRMA (ENSCWAG00000010486)	RAD54B (ENSCWAG00000010279)	GEM (ENSCWAG00000010229)	CDH17 (ENSCWAG00000010015)	PDP1 (ENSCWAG00000009970)	TMEM67 (ENSCWAG00000009909)	RBM12B (ENSCWAG00000009880)	ENSCWAG00000009745	TRIQK (ENSCWAG00000009683)	RUNX1T1 (ENSCWAG00000009249)	SLC26A7 (ENSCWAG00000008844)	LRRC69 (ENSCWAG00000008730)
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Cetacea	ANCESTRAL SPECIES	17	ENSGT00940000155144.j	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000003248.a.a.b.d	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00390000001958.n.b	ENSGT00950000183176.b.f
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00940000155144.j	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000182878.b.b.k.b	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000003248.a.a.b.d	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00390000001958.n.b	ENSGT00940000166009
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00390000001958.n.b	ENSGT00940000166009
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00440000033468.c.b.q.a	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00390000001958.n.b
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00440000033468.c.b.q.a	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00390000001958.n.b
Narwhal	MODERN SPECIES	300	MATN2 (ENSMMNG00015012438)	LAPTM4B (ENSMMNG00015012560)	MTDH (ENSMMNG00015012582)	TSPYL5 (ENSMMNG00015012653)	CPQ (ENSMMNG00015012661)	SDC2 (ENSMMNG00015012686)	PTDSS1 (ENSMMNG00015012705)	MTERF3 (ENSMMNG00015012737)	ENSMMNG00015012785	GDF6 (ENSMMNG00015012801)	ENSMMNG00015012811	CFAP418 (ENSMMNG00015012831)	PLEKHF2 (ENSMMNG00015012843) #19	NDUFAF6 (ENSMMNG00015012863) #20	TP53INP1 (ENSMMNG00015012889) #21	CCNE2 (ENSMMNG00015012904) #22	INTS8 (ENSMMNG00015012933) #23	DPY19L4 (ENSMMNG00015013031)	ESRP1 (ENSMMNG00015013094)	VIRMA (ENSMMNG00015013145)	NACA2 (ENSMMNG00015013186)	RAD54B (ENSMMNG00015013209)	GEM (ENSMMNG00015013237)	CDH17 (ENSMMNG00015013261)	PDP1 (ENSMMNG00015013290)	TMEM67 (ENSMMNG00015013303)	RBM12B (ENSMMNG00015013330)	CIBAR1 (ENSMMNG00015013345)	TRIQK (ENSMMNG00015013365)	ENSMMNG00015013370	ENSMMNG00015013384
Beluga whale	MODERN SPECIES	9	ENSDLEG00000003070	MTDH (ENSDLEG00000003077)	TSPYL5 (ENSDLEG00000003102)	CPQ (ENSDLEG00000003107)	SDC2 (ENSDLEG00000003137)	PTDSS1 (ENSDLEG00000003149)	MTERF3 (ENSDLEG00000003175)	ENSDLEG00000003190	GDF6 (ENSDLEG00000003195)	ENSDLEG00000003204	CFAP418 (ENSDLEG00000003235)	PLEKHF2 (ENSDLEG00000003248) #19	NDUFAF6 (ENSDLEG00000003260) #20	TP53INP1 (ENSDLEG00000003269) #21	INTS8 (ENSDLEG00000003281) #23	CCNE2 (ENSDLEG00000003335) #22	DPY19L4 (ENSDLEG00000003350)	ESRP1 (ENSDLEG00000003391)	VIRMA (ENSDLEG00000003400)	ENSDLEG00000003429	RAD54B (ENSDLEG00000003431)	FSBP (ENSDLEG00000003437)	GEM (ENSDLEG00000003439)	CDH17 (ENSDLEG00000003453)	PDP1 (ENSDLEG00000003518)	TMEM67 (ENSDLEG00000003533)	RBM12B (ENSDLEG00000003583)	ENSDLEG00000000093	TRIQK (ENSDLEG00000000114)	ENSDLEG00000000125	RUNX1T1 (ENSDLEG00000000164)
Vaquita	MODERN SPECIES	8	ENSPSNG00000016013	MATN2 (ENSPSNG00000015000)	ENSPSNG00000014848	MTDH (ENSPSNG00000014659)	TSPYL5 (ENSPSNG00000014593)	CPQ (ENSPSNG00000014529)	SDC2 (ENSPSNG00000014445)	PTDSS1 (ENSPSNG00000014356)	MTERF3 (ENSPSNG00000014276)	ENSPSNG00000014175	GDF6 (ENSPSNG00000014093)	CFAP418 (ENSPSNG00000014050)	PLEKHF2 (ENSPSNG00000014005) #19	NDUFAF6 (ENSPSNG00000013893) #20	TP53INP1 (ENSPSNG00000013803) #21	CCNE2 (ENSPSNG00000013721) #22	INTS8 (ENSPSNG00000013648) #23	DPY19L4 (ENSPSNG00000013482)	ESRP1 (ENSPSNG00000012875)	ENSPSNG00000012786	VIRMA (ENSPSNG00000012664)	RAD54B (ENSPSNG00000012530)	GEM (ENSPSNG00000012467)	CDH17 (ENSPSNG00000012164)	PDP1 (ENSPSNG00000012063)	TMEM67 (ENSPSNG00000011687)	RBM12B (ENSPSNG00000011643)	CIBAR1 (ENSPSNG00000011581)	TRIQK (ENSPSNG00000011518)	ENSPSNG00000011476	RUNX1T1 (ENSPSNG00000011288)
Dolphin	MODERN SPECIES	1571																CCNE2 (ENSTTRG00000004681) #22	INTS8 (ENSTTRG00000004591) #23
Sperm whale	MODERN SPECIES	6	MTDH (ENSPCTG00005006348)	TSPYL5 (ENSPCTG00005006480)	CPQ (ENSPCTG00005006492)	ENSPCTG00005006521	SDC2 (ENSPCTG00005006539)	PTDSS1 (ENSPCTG00005006587)	MTERF3 (ENSPCTG00005006724)	ENSPCTG00005006779	GDF6 (ENSPCTG00005006818)	ENSPCTG00005006830	C15H8orf37 (ENSPCTG00005006841)	PLEKHF2 (ENSPCTG00005006872) #19	NDUFAF6 (ENSPCTG00005006899) #20	TP53INP1 (ENSPCTG00005006971) #21	ENSPCTG00005007014	CCNE2 (ENSPCTG00005007033) #22	INTS8 (ENSPCTG00005007091) #23	DPY19L4 (ENSPCTG00005007336)	ESRP1 (ENSPCTG00005007404)	VIRMA (ENSPCTG00005007475)	ENSPCTG00005007598	RAD54B (ENSPCTG00005007630)	GEM (ENSPCTG00005007759)	CDH17 (ENSPCTG00005007812)	ENSPCTG00005007923	PDP1 (ENSPCTG00005007940)	TMEM67 (ENSPCTG00005007975)	ENSPCTG00005008073	RBM12B (ENSPCTG00005008096)	ENSPCTG00005008101	ENSPCTG00005008114
Blue whale	MODERN SPECIES	8	ENSBMSG00010014726	MTDH (ENSBMSG00010014792)	TSPYL5 (ENSBMSG00010014931)	CPQ (ENSBMSG00010014948)	SDC2 (ENSBMSG00010014977)	PTDSS1 (ENSBMSG00010015027)	MTERF3 (ENSBMSG00010015060)	ENSBMSG00010015122	GDF6 (ENSBMSG00010015166)	ENSBMSG00010015195	CFAP418 (ENSBMSG00010015212)	ENSBMSG00010015232	PLEKHF2 (ENSBMSG00010015243) #19	NDUFAF6 (ENSBMSG00010015267) #20	TP53INP1 (ENSBMSG00010015369) #21	CCNE2 (ENSBMSG00010015418) #22	INTS8 (ENSBMSG00010015475) #23	DPY19L4 (ENSBMSG00010015651)	ESRP1 (ENSBMSG00010015708)	VIRMA (ENSBMSG00010015867)	RAD54B (ENSBMSG00010015975)	GEM (ENSBMSG00010016010)	CDH17 (ENSBMSG00010016044)	PDP1 (ENSBMSG00010016171)	TMEM67 (ENSBMSG00010016211)	CIBAR1 (ENSBMSG00010016343)	TRIQK (ENSBMSG00010016391)	ENSBMSG00010016413	ENSBMSG00010016427	RUNX1T1 (ENSBMSG00010016503)	SLC26A7 (ENSBMSG00010017258)
Pecora	ANCESTRAL SPECIES	20	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Yarkand deer	MODERN SPECIES	13	ENSCHYG00000005355	MTDH (ENSCHYG00000005467)	ENSCHYG00000005882	ENSCHYG00000005896	CPQ (ENSCHYG00000005922)	ENSCHYG00000005986	PTDSS1 (ENSCHYG00000006074)	MTERF3 (ENSCHYG00000006209)	ENSCHYG00000006375	GDF6 (ENSCHYG00000006395)	CFAP418 (ENSCHYG00000006427)	ENSCHYG00000006473 #19	ENSCHYG00000006490 #20	TP53INP1 (ENSCHYG00000006568) #21	ENSCHYG00000006609	CCNE2 (ENSCHYG00000006642) #22	INTS8 (ENSCHYG00000006742) #23	DPY19L4 (ENSCHYG00000006979)	ESRP1 (ENSCHYG00000007116)	VIRMA (ENSCHYG00000007760)	RAD54B (ENSCHYG00000008124)	GEM (ENSCHYG00000008382)	CDH17 (ENSCHYG00000008444)	ENSCHYG00000008519	ENSCHYG00000008529	PDP1 (ENSCHYG00000008541)	ENSCHYG00000008561	TMEM67 (ENSCHYG00000008621)	ENSCHYG00000009165	RBM12B (ENSCHYG00000009201)	ENSCHYG00000009303
Percora_a	ANCESTRAL SPECIES	23	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Bovidae	ANCESTRAL SPECIES	22	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350	ENSGT00950000183176.b.f
Caprinae	ANCESTRAL SPECIES	18	ENSGT00940000158008	ENSGT00940000153446.a.a.f	ENSGT00940000154181.a	ENSGT00940000153288.a.a.d.h.b	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Rambouillet Sheep	MODERN SPECIES	25	ENSOARG00020024228	MATN2 (ENSOARG00020024259)	ENSOARG00020024346	MTDH (ENSOARG00020024390)	ENSOARG00020003057	TSPYL5 (ENSOARG00020003073)	CPQ (ENSOARG00020003139)	PTDSS1 (ENSOARG00020003441)	MTERF3 (ENSOARG00020003585)	UQCRB (ENSOARG00020003625)	GDF6 (ENSOARG00020003682)	C8orf37 (ENSOARG00020003713)	PLEKHF2 (ENSOARG00020003760) #19	ENSOARG00020003776 #20	TP53INP1 (ENSOARG00020003806) #21	CCNE2 (ENSOARG00020003851) #22	INTS8 (ENSOARG00020003948) #23	DPY19L4 (ENSOARG00020004191)	ESRP1 (ENSOARG00020004286)	VIRMA (ENSOARG00020004374)	FSBP (ENSOARG00020004524)	GEM (ENSOARG00020004634)	ENSOARG00020004677	ENSOARG00020004730	ENSOARG00020004788	PDP1 (ENSOARG00020004806)	TMEM67 (ENSOARG00020004847)	RBM12B (ENSOARG00020005027)	ENSOARG00020005054	ENSOARG00020005116	TRIQK (ENSOARG00020005140)
Goat	MODERN SPECIES	5	ENSCHIG00000012579	ENSCHIG00000019993	ENSCHIG00000019776	ENSCHIG00000008528	TSPYL5 (ENSCHIG00000008475)	CPQ (ENSCHIG00000013387)	SDC2 (ENSCHIG00000015573)	PTDSS1 (ENSCHIG00000015566)	MTERF3 (ENSCHIG00000009830)	ENSCHIG00000013644	GDF6 (ENSCHIG00000019581)	CFAP418 (ENSCHIG00000025987)	PLEKHF2 (ENSCHIG00000009121) #19	ENSCHIG00000014016 #20	TP53INP1 (ENSCHIG00000009037) #21	CCNE2 (ENSCHIG00000022720) #22	INTS8 (ENSCHIG00000014183) #23	ENSCHIG00000008889	DPY19L4 (ENSCHIG00000020474)	ESRP1 (ENSCHIG00000014128)	ENSCHIG00000019947	VIRMA (ENSCHIG00000015977)	RAD54B (ENSCHIG00000008230)	GEM (ENSCHIG00000008651)	CDH17 (ENSCHIG00000012379)	ENSCHIG00000001629	PDP1 (ENSCHIG00000021127)	ENSCHIG00000011909	TMEM67 (ENSCHIG00000015650)	RBM12B (ENSCHIG00000006790)	ENSCHIG00000023975
Bovinae	ANCESTRAL SPECIES	18	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00940000153288.a.a.d	ENSGT00510000046986.x.a.c	ENSGT00940000162862.c	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511.l	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350	ENSGT00950000183176.b.f
Bos	ANCESTRAL SPECIES	21	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00940000162862.c	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511.l	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c.fb.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350	ENSGT00950000183176.b.f
Bos_b	ANCESTRAL SPECIES	25	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a.e.a.b	ENSGT00940000154181.a	ENSGT00950000182901.a.a.b.b.a.b.a.a.b.b.b	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511.l	ENSGT00390000002833.c	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c.fb.a	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Cow	MODERN SPECIES	5	MTDH (ENSBTAG00000003098)	ENSBTAG00000032432	ENSBTAG00000011290	TSPYL5 (ENSBTAG00000011572)	ENSBTAG00000046135	CPQ (ENSBTAG00000011908)	SDC2 (ENSBTAG00000014357)	PTDSS1 (ENSBTAG00000013901)	MTERF3 (ENSBTAG00000001522)	UQCRB (ENSBTAG00000001521)	GDF6 (ENSBTAG00000007687)	CFAP418 (ENSBTAG00000043970)	PLEKHF2 (ENSBTAG00000019581) #19	NDUFAF6 (ENSBTAG00000007570) #20	TP53INP1 (ENSBTAG00000055158) #21	CCNE2 (ENSBTAG00000004906) #22	INTS8 (ENSBTAG00000004902) #23	DPY19L4 (ENSBTAG00000013621)	ESRP1 (ENSBTAG00000021838)	VIRMA (ENSBTAG00000003789)	RAD54B (ENSBTAG00000000632)	FSBP (ENSBTAG00000024984)	GEM (ENSBTAG00000007596)	CDH17 (ENSBTAG00000021964)	PDP1 (ENSBTAG00000000199)	TMEM67 (ENSBTAG00000044190)	RBM12B (ENSBTAG00000013408)	CIBAR1 (ENSBTAG00000013405)	TRIQK (ENSBTAG00000047532)	RUNX1T1 (ENSBTAG00000017339)	SLC26A7 (ENSBTAG00000032301)
Hybrid Bos Indicus	MODERN SPECIES	5	MTDH (ENSBIXG00005010861)	ENSBIXG00005010775	ENSBIXG00005010768	CPQ (ENSBIXG00005010700)	SDC2 (ENSBIXG00005000654)	ENSBIXG00005000911	ENSBIXG00005010622	PTDSS1 (ENSBIXG00005010591)	MTERF3 (ENSBIXG00005010525)	ENSBIXG00005010474	GDF6 (ENSBIXG00005010451)	CFAP418 (ENSBIXG00005000880)	PLEKHF2 (ENSBIXG00005010404) #19	NDUFAF6 (ENSBIXG00005010382) #20	TP53INP1 (ENSBIXG00005010325) #21	CCNE2 (ENSBIXG00005010292) #22	INTS8 (ENSBIXG00005000820) #23	ENSBIXG00005010158	DPY19L4 (ENSBIXG00005010150)	ENSBIXG00005010129	ENSBIXG00005010040	RAD54B (ENSBIXG00005005949)	ENSBIXG00005000675	GEM (ENSBIXG00005009904)	CDH17 (ENSBIXG00005000643)	PDP1 (ENSBIXG00005009795)	TMEM67 (ENSBIXG00005009644)	ENSBIXG00005000400	TRIQK (ENSBIXG00005009081)	RUNX1T1 (ENSBIXG00005009027)	SLC26A7 (ENSBIXG00005008908)
Bos_a	ANCESTRAL SPECIES	60					ENSGT00940000162862.c	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a.a.b	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511.l	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c.fb.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Wild yak	MODERN SPECIES	732												CFAP418 (ENSBMUG00000002388)	PLEKHF2 (ENSBMUG00000002369) #19	NDUFAF6 (ENSBMUG00000002348) #20	TP53INP1 (ENSBMUG00000002321) #21	CCNE2 (ENSBMUG00000002270) #22	INTS8 (ENSBMUG00000002247) #23	DPY19L4 (ENSBMUG00000002208)	ESRP1 (ENSBMUG00000002119)	VIRMA (ENSBMUG00000002044)	RAD54B (ENSBMUG00000001961)	GEM (ENSBMUG00000001922)	CDH17 (ENSBMUG00000001883)	PDP1 (ENSBMUG00000001831)	TMEM67 (ENSBMUG00000001802)	RBM12B (ENSBMUG00000001765)	ENSBMUG00000001746
Domestic yak	MODERN SPECIES	9	MATN2 (ENSBGRG00000004856)	ENSBGRG00000005040	MTDH (ENSBGRG00000005120)	ENSBGRG00000005453	TSPYL5 (ENSBGRG00000005504)	CPQ (ENSBGRG00000005518)	SDC2 (ENSBGRG00000005618)	ENSBGRG00000005697	PTDSS1 (ENSBGRG00000005711)	MTERF3 (ENSBGRG00000005841)	ENSBGRG00000005916	GDF6 (ENSBGRG00000005947)	CFAP418 (ENSBGRG00000005980)	NDUFAF6 (ENSBGRG00000006037) #20	TP53INP1 (ENSBGRG00000006104) #21	CCNE2 (ENSBGRG00000006166) #22	INTS8 (ENSBGRG00000006264) #23	DPY19L4 (ENSBGRG00000006789)	ESRP1 (ENSBGRG00000007064)	VIRMA (ENSBGRG00000008337)	RAD54B (ENSBGRG00000008611)	GEM (ENSBGRG00000008787)	CDH17 (ENSBGRG00000008888)	PDP1 (ENSBGRG00000009030)	TMEM67 (ENSBGRG00000009278)	RBM12B (ENSBGRG00000010030)	ENSBGRG00000010058	ENSBGRG00000010153	TRIQK (ENSBGRG00000010214)	RUNX1T1 (ENSBGRG00000010331)	SLC26A7 (ENSBGRG00000010530)
American bison	MODERN SPECIES	2892						SDC2 (ENSBBBG00000003987)	PTDSS1 (ENSBBBG00000016024)	MTERF3 (ENSBBBG00000016006)	ENSBBBG00000003981	GDF6 (ENSBBBG00000008331)	ENSBBBG00000002575	CFAP418 (ENSBBBG00000015959)	PLEKHF2 (ENSBBBG00000015951) #19	NDUFAF6 (ENSBBBG00000007034) #20	TP53INP1 (ENSBBBG00000015906) #21	CCNE2 (ENSBBBG00000003954) #22	INTS8 (ENSBBBG00000003945) #23	DPY19L4 (ENSBBBG00000007456)	ESRP1 (ENSBBBG00000015792)	VIRMA (ENSBBBG00000015671)	RAD54B (ENSBBBG00000015642)	GEM (ENSBBBG00000003433)	CDH17 (ENSBBBG00000003449)	PDP1 (ENSBBBG00000015585)	TMEM67 (ENSBBBG00000015579)	ENSBBBG00000015527	RBM12B (ENSBBBG00000015521)	ENSBBBG00000015518	ENSBBBG00000015511	ENSBBBG00000015505	ENSBBBG00000003860
Siberian musk deer	MODERN SPECIES	174	ENSMMSG00000001801	MATN2 (ENSMMSG00000001772)	LAPTM4B (ENSMMSG00000001732)	MTDH (ENSMMSG00000001656)	TSPYL5 (ENSMMSG00000001636)	CPQ (ENSMMSG00000001621)	SDC2 (ENSMMSG00000001606)	PTDSS1 (ENSMMSG00000001590)	MTERF3 (ENSMMSG00000001570)	ENSMMSG00000001556	GDF6 (ENSMMSG00000001549)	CFAP418 (ENSMMSG00000001518)	PLEKHF2 (ENSMMSG00000001511) #19	NDUFAF6 (ENSMMSG00000001482) #20	TP53INP1 (ENSMMSG00000001465) #21	CCNE2 (ENSMMSG00000001449) #22	INTS8 (ENSMMSG00000001404) #23	DPY19L4 (ENSMMSG00000001374)	ESRP1 (ENSMMSG00000001302)	VIRMA (ENSMMSG00000001204)	RAD54B (ENSMMSG00000001134)	ENSMMSG00000001099	GEM (ENSMMSG00000001083)	CDH17 (ENSMMSG00000000983)	PDP1 (ENSMMSG00000000948)	ENSMMSG00000000936	TMEM67 (ENSMMSG00000000780)	RBM12B (ENSMMSG00000000739)	ENSMMSG00000000702	ENSMMSG00000000677	TRIQK (ENSMMSG00000000665)
Camelidae	ANCESTRAL SPECIES	19	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.a	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT01030000234950	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Arabian camel	MODERN SPECIES	17	ENSCDRG00005009388	RPL30 (ENSCDRG00005009291)	MATN2 (ENSCDRG00005008941)	MTDH (ENSCDRG00005021271)	TSPYL5 (ENSCDRG00005021266)	CPQ (ENSCDRG00005021258)	SDC2 (ENSCDRG00005021247)	PTDSS1 (ENSCDRG00005021243)	MTERF3 (ENSCDRG00005021236)	UQCRB (ENSCDRG00005021231)	GDF6 (ENSCDRG00005021224)	CFAP418 (ENSCDRG00005021217)	PLEKHF2 (ENSCDRG00005021213) #19	NDUFAF6 (ENSCDRG00005021205) #20	TP53INP1 (ENSCDRG00005021197) #21	CCNE2 (ENSCDRG00005021183) #22	INTS8 (ENSCDRG00005021172) #23	DPY19L4 (ENSCDRG00005021160)	ENSCDRG00005021153	ESRP1 (ENSCDRG00005021141)	VIRMA (ENSCDRG00005021115)	RAD54B (ENSCDRG00005021104)	GEM (ENSCDRG00005021094)	CDH17 (ENSCDRG00005021084)	PDP1 (ENSCDRG00005021075)	TMEM67 (ENSCDRG00005021066)	RBM12B (ENSCDRG00005021057)	CIBAR1 (ENSCDRG00005021047)	ENSCDRG00005021030	ENSCDRG00005021023	RUNX1T1 (ENSCDRG00005020987)
Alpaca	MODERN SPECIES	3341													PLEKHF2 (ENSVPAG00000006578) #19	NDUFAF6 (ENSVPAG00000006576) #20	TP53INP1 (ENSVPAG00000006575) #21	CCNE2 (ENSVPAG00000006573) #22	INTS8 (ENSVPAG00000006571) #23	DPY19L4 (ENSVPAG00000006569)	ESRP1 (ENSVPAG00000006566)
Laurasiatheria_b	ANCESTRAL SPECIES	20	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.b	ENSGT01100000264651	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Carnivora	ANCESTRAL SPECIES	22	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Caniformia	ANCESTRAL SPECIES	23	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00930000152930	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f
Caniformia_b	ANCESTRAL SPECIES	22	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Ursidae	ANCESTRAL SPECIES	26	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008.l	ENSGT00940000153446.a.a.b	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222.d	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00510000046985.i	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f
Ursus	ANCESTRAL SPECIES	84												ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00510000046985.i	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f
Polar bear	MODERN SPECIES	156												CFAP418 (ENSUMAG00000016650)	PLEKHF2 (ENSUMAG00000016646) #19	NDUFAF6 (ENSUMAG00000016630) #20	TP53INP1 (ENSUMAG00000016625) #21	CCNE2 (ENSUMAG00000016622) #22	INTS8 (ENSUMAG00000016610) #23	DPY19L4 (ENSUMAG00000016525)	ESRP1 (ENSUMAG00000016474)	ENSUMAG00000016465	VIRMA (ENSUMAG00000016435)	FSBP (ENSUMAG00000016424)	RAD54B (ENSUMAG00000016401)	GEM (ENSUMAG00000016376)	CDH17 (ENSUMAG00000016167)	PDP1 (ENSUMAG00000016109)	TMEM67 (ENSUMAG00000016030)	RBM12B (ENSUMAG00000016008)	CIBAR1 (ENSUMAG00000015968)	TRIQK (ENSUMAG00000015955)	RUNX1T1 (ENSUMAG00000015626)
Giant Panda	MODERN SPECIES	19	RPL30 (ENSAMEG00000000605)	MATN2 (ENSAMEG00000000609)	LAPTM4B (ENSAMEG00000000664)	MTDH (ENSAMEG00000000675)	TSPYL5 (ENSAMEG00000027541)	CPQ (ENSAMEG00000026501)	SDC2 (ENSAMEG00000007342)	PTDSS1 (ENSAMEG00000007303)	MTERF3 (ENSAMEG00000007290)	ENSAMEG00000030901	C8orf37 (ENSAMEG00000024765)	ENSAMEG00000024035	ENSAMEG00000020257 #19	NDUFAF6 (ENSAMEG00000005574) #20	TP53INP1 (ENSAMEG00000025437) #21	CCNE2 (ENSAMEG00000005590) #22	INTS8 (ENSAMEG00000005646) #23	DPY19L4 (ENSAMEG00000005702)	ESRP1 (ENSAMEG00000005723)	ENSAMEG00000025034	VIRMA (ENSAMEG00000005860)	RAD54B (ENSAMEG00000005834)	GEM (ENSAMEG00000005822)	CDH17 (ENSAMEG00000012449)	ENSAMEG00000024252	PDP1 (ENSAMEG00000012445)	TMEM67 (ENSAMEG00000007154)	RBM12B (ENSAMEG00000025025)	ENSAMEG00000007117	TRIQK (ENSAMEG00000007110)	RUNX1T1 (ENSAMEG00000007013)
Mustelinae	ANCESTRAL SPECIES	70	ENSGT00390000012138.a.b.t.bb.b	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z.g.a	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00390000008778	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Ferret	MODERN SPECIES	298	LAPTM4B (ENSMPUG00000008728)	MTDH (ENSMPUG00000008731)	TSPYL5 (ENSMPUG00000018632)	CPQ (ENSMPUG00000008739)	SDC2 (ENSMPUG00000008745)	ENSMPUG00000008752	PTDSS1 (ENSMPUG00000008757)	MTERF3 (ENSMPUG00000008759)	ENSMPUG00000008761	GDF6 (ENSMPUG00000008770)	CFAP418 (ENSMPUG00000008788)	PLEKHF2 (ENSMPUG00000018634) #19	NDUFAF6 (ENSMPUG00000008796) #20	ENSMPUG00000008798	TP53INP1 (ENSMPUG00000008800) #21	CCNE2 (ENSMPUG00000008809) #22	INTS8 (ENSMPUG00000008816) #23	DPY19L4 (ENSMPUG00000008832)	ESRP1 (ENSMPUG00000008838)	VIRMA (ENSMPUG00000008850)	FSBP (ENSMPUG00000008871)	RAD54B (ENSMPUG00000008878)	GEM (ENSMPUG00000009023)	CDH17 (ENSMPUG00000009064)	PDP1 (ENSMPUG00000009080)	TMEM67 (ENSMPUG00000009088)	RBM12B (ENSMPUG00000018637)	CIBAR1 (ENSMPUG00000009112)	TRIQK (ENSMPUG00000009124)	RUNX1T1 (ENSMPUG00000009128)	SLC26A7 (ENSMPUG00000009145)
American mink	MODERN SPECIES	342											ENSNVIG00000001751	CFAP418 (ENSNVIG00000001723)	PKHF2 (ENSNVIG00000001710) #19	NDUFAF6 (ENSNVIG00000001688) #20	TP53INP1 (ENSNVIG00000001668) #21	CCNE2 (ENSNVIG00000001622) #22	INTS8 (ENSNVIG00000001600) #23	D19L4 (ENSNVIG00000001504)	ESRP1 (ENSNVIG00000001196)	VIRMA (ENSNVIG00000001120)	FSBP (ENSNVIG00000001105)	RAD54B (ENSNVIG00000001062)	GEM (ENSNVIG00000001021)	CDH17 (ENSNVIG00000000946)	PDP1 (ENSNVIG00000000930)	TMEM67 (ENSNVIG00000000894)	RBM12B (ENSNVIG00000000880)	CIBAR1 (ENSNVIG00000000770)
Canidae	ANCESTRAL SPECIES	42			ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Canis_lupus	ANCESTRAL SPECIES	37				ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Dog	MODERN SPECIES	21				OR6C75C (ENSCAFG00845017568)	MTDH (ENSCAFG00845017434)	TSPYL5 (ENSCAFG00845017384)	ENSCAFG00845017355	CPQ (ENSCAFG00845017121)	PTDSS1 (ENSCAFG00845016804)	ENSCAFG00845016723	ENSCAFG00845016606	CFAP418 (ENSCAFG00845016488)	ENSCAFG00845016448 #19	NDUFAF6 (ENSCAFG00845016345) #20	TP53INP1 (ENSCAFG00845016236) #21	CCNE2 (ENSCAFG00845016153) #22	INTS8 (ENSCAFG00845016039) #23	DPY19L4 (ENSCAFG00845015605)	ESRP1 (ENSCAFG00845015323)	VIRMA (ENSCAFG00845015063)	RAD54B (ENSCAFG00845014874)	GEM (ENSCAFG00845014817)	CDH17 (ENSCAFG00845014632)	PDP1 (ENSCAFG00845014567)	TMEM67 (ENSCAFG00845014512)	RBM12B (ENSCAFG00845014482)	CIBAR1 (ENSCAFG00845014459)	ENSCAFG00845021945	RUNX1T1 (ENSCAFG00845021248)	ENSCAFG00845020927	SLC26A7 (ENSCAFG00845020813)
Dingo	MODERN SPECIES	293			MTDH (ENSCAFG00020009369)	ENSCAFG00020009637	CPQ (ENSCAFG00020009642)	SDC2 (ENSCAFG00020009658)	PTDSS1 (ENSCAFG00020009665)	MTERF3 (ENSCAFG00020009670)	UQCRB (ENSCAFG00020009680)	ENSCAFG00020009694	ENSCAFG00020009700	CFAP418 (ENSCAFG00020009721)	PLEKHF2 (ENSCAFG00020009723) #19	NDUFAF6 (ENSCAFG00020009729) #20	TP53INP1 (ENSCAFG00020009749) #21	CCNE2 (ENSCAFG00020009760) #22	INTS8 (ENSCAFG00020009921) #23	DPY19L4 (ENSCAFG00020010847)	ESRP1 (ENSCAFG00020010882)	VIRMA (ENSCAFG00020011073)	RAD54B (ENSCAFG00020012084)	FSBP (ENSCAFG00020012090)	GEM (ENSCAFG00020012092)	CDH17 (ENSCAFG00020012112)	PDP1 (ENSCAFG00020012132)	TMEM67 (ENSCAFG00020012146)	RBM12B (ENSCAFG00020012203)	CIBAR1 (ENSCAFG00020012209)	TRIQK (ENSCAFG00020012222)	RUNX1T1 (ENSCAFG00020012225)	SLC26A7 (ENSCAFG00020012231)
Red fox	MODERN SPECIES	3				MTDH (ENSVVUG00000003423)	ENSVVUG00000003400	CPQ (ENSVVUG00000003347)	ENSVVUG00000003314	SDC2 (ENSVVUG00000003305)	PTDSS1 (ENSVVUG00000003248)	MTERF3 (ENSVVUG00000003230)	UQCRB (ENSVVUG00000003224)	ENSVVUG00000003177	PLEKHF2 (ENSVVUG00000003164) #19	NDUFAF6 (ENSVVUG00000003142) #20	TP53INP1 (ENSVVUG00000003119) #21	CCNE2 (ENSVVUG00000003111) #22	INTS8 (ENSVVUG00000003083) #23	DPY19L4 (ENSVVUG00000003044)	ESRP1 (ENSVVUG00000002900)	VIRMA (ENSVVUG00000002835)	ENSVVUG00000002830	FSBP (ENSVVUG00000002829)	GEM (ENSVVUG00000002821)	CDH17 (ENSVVUG00000002787)	PDP1 (ENSVVUG00000002781)	TMEM67 (ENSVVUG00000002722)	RBM12B (ENSVVUG00000002694)	ENSVVUG00000002691	TRIQK (ENSVVUG00000002665)	RUNX1T1 (ENSVVUG00000002591)	ENSVVUG00000002542
Felidae	ANCESTRAL SPECIES	22	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Panthera	ANCESTRAL SPECIES	16	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
Panthera_a	ANCESTRAL SPECIES	16	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b
leopard	MODERN SPECIES	24												CFAP418 (ENSPPRG00000015973)	PLEKHF2 (ENSPPRG00000016578) #19	NDUFAF6 (ENSPPRG00000019798) #20	TP53INP1 (ENSPPRG00000022199) #21	CCNE2 (ENSPPRG00000001062) #22	INTS8 (ENSPPRG00000002272) #23	DPY19L4 (ENSPPRG00000003290)	ESRP1 (ENSPPRG00000005067)	VIRMA (ENSPPRG00000006662)	RAD54B (ENSPPRG00000007571)	GEM (ENSPPRG00000008023)	CDH17 (ENSPPRG00000009023)	PDP1 (ENSPPRG00000009762)	TMEM67 (ENSPPRG00000010104)	CIBAR1 (ENSPPRG00000014143)	ENSPPRG00000017532	TRIQK (ENSPPRG00000019008)	RUNX1T1 (ENSPPRG00000022874)	ENSPPRG00000017651	SLC26A7 (ENSPPRG00000001892)
lion	MODERN SPECIES	509	LAPTM4B (ENSPLOG00000000138)	MTDH (ENSPLOG00000000170)	TSPYL5 (ENSPLOG00000000200)	CPQ (ENSPLOG00000000221)	ENSPLOG00000000242	SDC2 (ENSPLOG00000000261)	PTDSS1 (ENSPLOG00000000282)	MTERF3 (ENSPLOG00000000321)	UQCRB (ENSPLOG00000000346)	GDF6 (ENSPLOG00000000361)	CFAP418 (ENSPLOG00000000369)	ENSPLOG00000000389	PLEKHF2 (ENSPLOG00000000400) #19	NDUFAF6 (ENSPLOG00000000416) #20	TP53INP1 (ENSPLOG00000000437) #21	CCNE2 (ENSPLOG00000000448) #22	INTS8 (ENSPLOG00000000486) #23	DPY19L4 (ENSPLOG00000000568)	ESRP1 (ENSPLOG00000000760)	VIRMA (ENSPLOG00000000910)	RAD54B (ENSPLOG00000001032)	ENSPLOG00000001069	GEM (ENSPLOG00000001086)	CDH17 (ENSPLOG00000001126)	PDP1 (ENSPLOG00000001174)	TMEM67 (ENSPLOG00000001214)	RBM12B (ENSPLOG00000001285)	CIBAR1 (ENSPLOG00000001331)	TRIQK (ENSPLOG00000001363)	ENSPLOG00000001380	RUNX1T1 (ENSPLOG00000001456)
Tiger	MODERN SPECIES	17	RIDA (ENSPTIG00000016283)	ERICH5 (ENSPTIG00000016261)	RPL30 (ENSPTIG00000016098)	MATN2 (ENSPTIG00000015210)	LAPTM4B (ENSPTIG00000015012)	MTDH (ENSPTIG00000014696)	CPQ (ENSPTIG00000014176)	SDC2 (ENSPTIG00000014010)	PTDSS1 (ENSPTIG00000013972)	MTERF3 (ENSPTIG00000013347)	ENSPTIG00000013060	CFAP418 (ENSPTIG00000013048)	PLEKHF2 (ENSPTIG00000009526) #19	NDUFAF6 (ENSPTIG00000012869) #20	TP53INP1 (ENSPTIG00000012762) #21	CCNE2 (ENSPTIG00000012528) #22	INTS8 (ENSPTIG00000012319) #23	DPY19L4 (ENSPTIG00000012124)	ESRP1 (ENSPTIG00000011778)
Cat	MODERN SPECIES	249	MATN2 (ENSFCAG00000002164)	LAPTM4B (ENSFCAG00000040131)	MTDH (ENSFCAG00000022136)	TSPYL5 (ENSFCAG00000003567)	CPQ (ENSFCAG00000028975)	SDC2 (ENSFCAG00000031304)	PTDSS1 (ENSFCAG00000004399)	MTERF3 (ENSFCAG00000028511)	UQCRB (ENSFCAG00000026302)	GDF6 (ENSFCAG00000042626)	ENSFCAG00000053589	CFAP418 (ENSFCAG00000036596)	PLEKHF2 (ENSFCAG00000025029) #19	NDUFAF6 (ENSFCAG00000013012) #20	TP53INP1 (ENSFCAG00000030998) #21	CCNE2 (ENSFCAG00000030963) #22	INTS8 (ENSFCAG00000006104) #23	DPY19L4 (ENSFCAG00000022014)	ESRP1 (ENSFCAG00000009920)	VIRMA (ENSFCAG00000024620)	RAD54B (ENSFCAG00000015513)	GEM (ENSFCAG00000015511)	CDH17 (ENSFCAG00000015508)	PDP1 (ENSFCAG00000043652)	TMEM67 (ENSFCAG00000012871)	RBM12B (ENSFCAG00000029274)	CIBAR1 (ENSFCAG00000023850)	TRIQK (ENSFCAG00000041839)	RUNX1T1 (ENSFCAG00000030412)	ENSFCAG00000037660	SLC26A7 (ENSFCAG00000008754)
Laurasiatheria_c	ANCESTRAL SPECIES	19	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.b	ENSGT01100000264651	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Chiroptera	ANCESTRAL SPECIES	27	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.b	ENSGT01100000264651	ENSGT00940000162274	ENSGT00940000160140.a.b	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Microchiroptera	ANCESTRAL SPECIES	27	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00950000186060	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.y.b	ENSGT01100000264651	ENSGT00940000162274	ENSGT00940000160140.a.b	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00390000008778	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00510000055281	ENSGT00950000183176.b.f
Greater horseshoe bat	MODERN SPECIES	5	TSPYL5 (ENSRFEG00010015512)	CPQ (ENSRFEG00010015436)	ENSRFEG00010015382	SDC2 (ENSRFEG00010015237)	PTDSS1 (ENSRFEG00010015127)	MTERF3 (ENSRFEG00010015026)	ENSRFEG00010014937	ENSRFEG00010014885	GDF6 (ENSRFEG00010014836)	ENSRFEG00010014787	ENSRFEG00010014719	CFAP418 (ENSRFEG00010014645)	NDUFAF6 (ENSRFEG00010014482) #20	ENSRFEG00010014401	TP53INP1 (ENSRFEG00010014304) #21	CCNE2 (ENSRFEG00010013751) #22	INTS8 (ENSRFEG00010013583) #23	ENSRFEG00010013474	ENSRFEG00010013412	DPY19L4 (ENSRFEG00010013324)	ESRP1 (ENSRFEG00010012180)	ENSRFEG00010012079	VIRMA (ENSRFEG00010011950)	ENSRFEG00010011909	RAD54B (ENSRFEG00010011469)	GEM (ENSRFEG00010011387)	CDH17 (ENSRFEG00010011194)	PDP1 (ENSRFEG00010010990)	ENSRFEG00010010832	ENSRFEG00010010784	RBM12B (ENSRFEG00010010756)
Microbat	MODERN SPECIES	1340										MTERF3 (ENSMLUG00000007186)	UQCRB (ENSMLUG00000007182)	ENSMLUG00000005392	CFAP418 (ENSMLUG00000001853)	PLEKHF2 (ENSMLUG00000012204) #19	TP53INP1 (ENSMLUG00000012849) #21	CCNE2 (ENSMLUG00000012838) #22	INTS8 (ENSMLUG00000012823) #23	ENSMLUG00000026731
Megabat	MODERN SPECIES	1938															TP53INP1 (ENSPVAG00000004758) #21	CCNE2 (ENSPVAG00000004757) #22	INTS8 (ENSPVAG00000004754) #23
Equus	ANCESTRAL SPECIES	14	ENSGT00390000012138.a.b.t.cb	ENSGT00940000158008	ENSGT00940000153446.a.a	ENSGT00940000154181.a	ENSGT00940000162862	ENSGT00390000018110	ENSGT00940000157222	ENSGT00530000063576.B	ENSGT00390000005801	ENSGT00390000012916.z	ENSGT00940000162274	ENSGT00390000006173	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b	ENSGT00940000159511	ENSGT00390000002833	ENSGT00940000156966	ENSGT00940000157830	ENSGT00940000157655	ENSGT00940000156368.b	ENSGT00390000010606	ENSGT00940000158322	ENSGT00390000010285.c	ENSGT00390000017350	ENSGT00950000183176.b.f	ENSGT01100000263544.c.b	ENSGT00390000012840
Donkey	MODERN SPECIES	3	ENSEASG00005034460	MATN2 (ENSEASG00005003231)	LAPTM4B (ENSEASG00005003271)	MTDH (ENSEASG00005003279)	TSPYL5 (ENSEASG00005038289)	CPQ (ENSEASG00005003289)	SDC2 (ENSEASG00005025355)	PTDSS1 (ENSEASG00005003297)	MTERF3 (ENSEASG00005003303)	ENSEASG00005032078	GDF6 (ENSEASG00005003314)	CFAP418 (ENSEASG00005003320)	PLEKHF2 (ENSEASG00005034229) #19	NDUFAF6 (ENSEASG00005003333) #20	TP53INP1 (ENSEASG00005003343) #21	CCNE2 (ENSEASG00005003365) #22	INTS8 (ENSEASG00005003493) #23	DPY19L4 (ENSEASG00005003633)	ESRP1 (ENSEASG00005003705)	VIRMA (ENSEASG00005004018)	ENSEASG00005004021	ENSEASG00005038425	ENSEASG00005032903	ENSEASG00005037139	ENSEASG00005036356	ENSEASG00005036290	ENSEASG00005026564	ENSEASG00005038230	RBFA (ENSEASG00005037791)	ENSEASG00005001925	TXNL4A (ENSEASG00005026566)
Horse	MODERN SPECIES	30	RPL30 (ENSECAG00000021705)	MATN2 (ENSECAG00000002579)	LAPTM4B (ENSECAG00000020137)	MTDH (ENSECAG00000010986)	TSPYL5 (ENSECAG00000009322)	CPQ (ENSECAG00000008913)	SDC2 (ENSECAG00000008484)	PTDSS1 (ENSECAG00000016050)	MTERF3 (ENSECAG00000012943)	UQCRB (ENSECAG00000009780)	GDF6 (ENSECAG00000006902)	ENSECAG00000048566	PLEKHF2 (ENSECAG00000028275) #19	NDUFAF6 (ENSECAG00000019146) #20	TP53INP1 (ENSECAG00000017665) #21	CCNE2 (ENSECAG00000020270) #22	INTS8 (ENSECAG00000020110) #23	DPY19L4 (ENSECAG00000024125)	ENSECAG00000052620	ESRP1 (ENSECAG00000000784)	VIRMA (ENSECAG00000012879)	ENSECAG00000049378	RAD54B (ENSECAG00000021949)	ENSECAG00000004316	ENSECAG00000059478	GEM (ENSECAG00000018531)	CDH17 (ENSECAG00000017615)	ENSECAG00000045038	PDP1 (ENSECAG00000016359)	TMEM67 (ENSECAG00000019054)	RBM12B (ENSECAG00000017870)
Eulipotyphla	ANCESTRAL SPECIES	410															ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23
Hedgehog	MODERN SPECIES	5887															TP53INP1 (ENSEEUG00000002072) #21	CCNE2 (ENSEEUG00000002016) #22	INTS8 (ENSEEUG00000001977) #23
Common shrew	MODERN SPECIES	4570																CCNE2 (ENSSARG00000006652) #22	INTS8 (ENSSARG00000006602) #23