Mus	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.b #7	ENSGT00940000153141.B.a #8	ENSGT00940000154502 #9	ENSGT00940000155059 #10	ENSGT00940000159497 #11	ENSGT00940000158863 #12	ENSGT00940000153886.a.b.f #13	ENSGT00940000153649.A #14	ENSGT00940000159947 #15	ENSGT00940000156304 #16	ENSGT00940000162274 #17	ENSGT00390000006173 #18	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b #24	ENSGT00940000159511 #25	ENSGT00390000002833 #26	ENSGT00940000156966 #27	ENSGT00390000008778 #28	ENSGT00940000157830 #29	ENSGT00940000157655 #30	ENSGT00940000156368.b #31	ENSGT00390000010606 #33	ENSGT00940000158322 #35	ENSGT00390000010285.c #36	ENSGT00390000017350	ENSGT00950000183176.b.f #37	ENSGT01100000263544.c.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.b #7	ENSGT00940000153141.B.a #8	ENSGT00940000154502 #9	ENSGT00940000155059 #10	ENSGT00940000159497 #11	ENSGT00940000158863 #12	ENSGT00940000153886.a.b.f #13	ENSGT00940000153649.A #14	ENSGT00940000159947 #15	ENSGT00940000156304 #16	ENSGT00940000162274 #17	ENSGT00390000006173 #18	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b #24	ENSGT00940000159511 #25	ENSGT00390000002833 #26	ENSGT00940000156966 #27	ENSGT00390000008778 #28	ENSGT00940000157830 #29	ENSGT00940000157655 #30	ENSGT00940000156368.b #31	ENSGT00390000010606 #33	ENSGT00940000158322 #35	ENSGT00390000010285.c #36	ENSGT00390000017350	ENSGT00950000183176.b.f #37	ENSGT01100000263544.c.b
Mus_B	ANCESTRAL SPECIES	22	ENSGT00520000055567.a.a.b #7	ENSGT00940000153141.B.a #8	ENSGT00940000154502 #9	ENSGT00940000155059 #10	ENSGT00940000159497 #11	ENSGT00940000158863 #12	ENSGT00940000153886.a.b.f #13	ENSGT00940000153649.A #14	ENSGT00940000159947 #15	ENSGT00940000156304 #16	ENSGT00940000162274 #17	ENSGT00390000006173 #18	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b #24	ENSGT00940000159511 #25	ENSGT00390000002833 #26	ENSGT00940000156966 #27	ENSGT00390000008778 #28	ENSGT00940000157830 #29	ENSGT00940000157655 #30	ENSGT00940000156368.b #31	ENSGT00390000010606 #33	ENSGT00940000158322.d #35	ENSGT00390000010285.c #36	ENSGT00390000017350	ENSGT00950000183176.b.f #37	ENSGT01100000263544.c.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.b #7	ENSGT00940000153141.B.a #8	ENSGT00940000154502 #9	ENSGT00940000155059 #10	ENSGT00940000159497 #11	ENSGT00940000158863 #12	ENSGT00940000153886.a.b.f #13	ENSGT00940000153649.A #14	ENSGT00940000159947 #15	ENSGT00940000156304 #16	ENSGT00940000162274 #17	ENSGT00390000006173 #18	ENSGT00940000156408 #19	ENSGT00510000048688 #20	ENSGT00530000063829.A #21	ENSGT00940000156934 #22	ENSGT00390000007597 #23	ENSGT00530000063023.A.b #24	ENSGT00940000159511 #25	ENSGT00390000002833 #26	ENSGT00940000156966 #27	ENSGT00390000008778 #28	ENSGT00940000157830 #29	ENSGT00940000157655 #30	ENSGT00940000156368.b #31	ENSGT00390000010606 #33	ENSGT00940000158322.d #35	ENSGT00390000010285.c #36	ENSGT00950000183176.b.f #37	ENSGT01100000263544.c.b	ENSGT00940000164066
spretus	MODERN SPECIES	13	Ubxn2b (MGP_SPRETEiJ_G0026738) #7	Cyp7a1 (MGP_SPRETEiJ_G0026739) #8	Sdcbp (MGP_SPRETEiJ_G0026740) #9	Nsmaf (MGP_SPRETEiJ_G0026741) #10	Tox (MGP_SPRETEiJ_G0026742) #11	Car8 (MGP_SPRETEiJ_G0026743) #12	Rab2a (MGP_SPRETEiJ_G0026744) #13	Chd7 (MGP_SPRETEiJ_G0026745) #14	Clvs1 (MGP_SPRETEiJ_G0026746) #15	Asph (MGP_SPRETEiJ_G0026747) #16	Gdf6 (MGP_SPRETEiJ_G0026748) #17	Cfap418 (MGP_SPRETEiJ_G0026749) #18	Plekhf2 (MGP_SPRETEiJ_G0026750) #19	Ndufaf6 (MGP_SPRETEiJ_G0026751) #20	Trp53inp1 (MGP_SPRETEiJ_G0026752) #21	Ccne2 (MGP_SPRETEiJ_G0026753) #22	Ints8 (MGP_SPRETEiJ_G0026754) #23	Dpy19l4 (MGP_SPRETEiJ_G0026755) #24	Esrp1 (MGP_SPRETEiJ_G0026756) #25	Virma (MGP_SPRETEiJ_G0026757) #26	Rad54b (MGP_SPRETEiJ_G0026758) #27	Fsbp (MGP_SPRETEiJ_G0026759) #28	Gem (MGP_SPRETEiJ_G0026760) #29	Cdh17 (MGP_SPRETEiJ_G0026761) #30	Pdp1 (MGP_SPRETEiJ_G0026762) #31	MGP_SPRETEiJ_G0026763 #32	Tmem67 (MGP_SPRETEiJ_G0026764) #33	MGP_SPRETEiJ_G0026765 #34	MGP_SPRETEiJ_G0026766 #35	Cibar1 (MGP_SPRETEiJ_G0026767) #36	Runx1t1 (MGP_SPRETEiJ_G0026768) #37
Steppe mouse	MODERN SPECIES	2764											Cfap418 (ENSMSIG00000015081) #18	Plekhf2 (ENSMSIG00000015105) #19	Ndufaf6 (ENSMSIG00000015127) #20	ENSMSIG00000015158	Trp53inp1 (ENSMSIG00000015170) #21	Ccne2 (ENSMSIG00000015176) #22	Ints8 (ENSMSIG00000015213) #23	Dpy19l4 (ENSMSIG00000015331) #24	Esrp1 (ENSMSIG00000015467) #25	Virma (ENSMSIG00000015653) #26	Rad54b (ENSMSIG00000015787) #27	ENSMSIG00000015872
Mouse	MODERN SPECIES	13	Ubxn2b (ENSMUSG00000028243) #7	Cyp7a1 (ENSMUSG00000028240) #8	Sdcbp (ENSMUSG00000028249) #9	Nsmaf (ENSMUSG00000028245) #10	Tox (ENSMUSG00000041272) #11	Car8 (ENSMUSG00000041261) #12	Rab2a (ENSMUSG00000047187) #13	Chd7 (ENSMUSG00000041235) #14	Clvs1 (ENSMUSG00000041216) #15	Asph (ENSMUSG00000028207) #16	Gdf6 (ENSMUSG00000051279) #17	Cfap418 (ENSMUSG00000059482) #18	Plekhf2 (ENSMUSG00000049969) #19	Ndufaf6 (ENSMUSG00000050323) #20	Trp53inp1 (ENSMUSG00000028211) #21	Ccne2 (ENSMUSG00000028212) #22	Ints8 (ENSMUSG00000040738) #23	Dpy19l4 (ENSMUSG00000045205) #24	Esrp1 (ENSMUSG00000040728) #25	Virma (ENSMUSG00000040720) #26	Rad54b (ENSMUSG00000078773) #27	Fsbp (ENSMUSG00000094595) #28	Gem (ENSMUSG00000028214) #29	Cdh17 (ENSMUSG00000028217) #30	Pdp1 (ENSMUSG00000049225) #31	Tmem67 (ENSMUSG00000049488) #33	Rbm12b2 (ENSMUSG00000052137) #35	Rbm12b1 (ENSMUSG00000046667) ##35	Cibar1 (ENSMUSG00000028218) #36	Triqk (ENSMUSG00000055963)	Runx1t1 (ENSMUSG00000006586) #37
Ryukyu mouse	MODERN SPECIES	13	Ubxn2b (MGP_CAROLIEiJ_G0025790) #7	Cyp7a1 (MGP_CAROLIEiJ_G0025791) #8	Sdcbp (MGP_CAROLIEiJ_G0025792) #9	Nsmaf (MGP_CAROLIEiJ_G0025793) #10	Tox (MGP_CAROLIEiJ_G0025794) #11	Car8 (MGP_CAROLIEiJ_G0025795) #12	Rab2a (MGP_CAROLIEiJ_G0025796) #13	Chd7 (MGP_CAROLIEiJ_G0025797) #14	Clvs1 (MGP_CAROLIEiJ_G0025798) #15	Asph (MGP_CAROLIEiJ_G0025799) #16	Gdf6 (MGP_CAROLIEiJ_G0025800) #17	Cfap418 (MGP_CAROLIEiJ_G0025801) #18	Plekhf2 (MGP_CAROLIEiJ_G0025802) #19	Ndufaf6 (MGP_CAROLIEiJ_G0025803) #20	Trp53inp1 (MGP_CAROLIEiJ_G0025804) #21	Ccne2 (MGP_CAROLIEiJ_G0025805) #22	Ints8 (MGP_CAROLIEiJ_G0025806) #23	Dpy19l4 (MGP_CAROLIEiJ_G0025807) #24	Esrp1 (MGP_CAROLIEiJ_G0025808) #25	Virma (MGP_CAROLIEiJ_G0025809) #26	Rad54b (MGP_CAROLIEiJ_G0025810) #27	Fsbp (MGP_CAROLIEiJ_G0025811) #28	Gem (MGP_CAROLIEiJ_G0025812) #29	Cdh17 (MGP_CAROLIEiJ_G0025813) #30	Pdp1 (MGP_CAROLIEiJ_G0025814) #31	Tmem67 (MGP_CAROLIEiJ_G0025815) #33	Cibar1 (MGP_CAROLIEiJ_G0025816) #36	Triqk (MGP_CAROLIEiJ_G0025818)	Runx1t1 (MGP_CAROLIEiJ_G0025819) #37	Slc26a7 (MGP_CAROLIEiJ_G0025820)	Lrrc69 (MGP_CAROLIEiJ_G0025821)
Shrew mouse	MODERN SPECIES	14	Ubxn2b (MGP_PahariEiJ_G0023913) #7	Cyp7a1 (MGP_PahariEiJ_G0023914) #8	Sdcbp (MGP_PahariEiJ_G0023915) #9	Nsmaf (MGP_PahariEiJ_G0023916) #10	Tox (MGP_PahariEiJ_G0023917) #11	Car8 (MGP_PahariEiJ_G0023918) #12	Rab2a (MGP_PahariEiJ_G0023919) #13	Chd7 (MGP_PahariEiJ_G0023920) #14	Clvs1 (MGP_PahariEiJ_G0023921) #15	Asph (MGP_PahariEiJ_G0023922) #16	Gdf6 (MGP_PahariEiJ_G0023923) #17	Cfap418 (MGP_PahariEiJ_G0023924) #18	Plekhf2 (MGP_PahariEiJ_G0023925) #19	Ndufaf6 (MGP_PahariEiJ_G0023926) #20	Trp53inp1 (MGP_PahariEiJ_G0023927) #21	Ccne2 (MGP_PahariEiJ_G0023928) #22	Ints8 (MGP_PahariEiJ_G0023929) #23	Dpy19l4 (MGP_PahariEiJ_G0023930) #24	Esrp1 (MGP_PahariEiJ_G0023931) #25	Virma (MGP_PahariEiJ_G0023932) #26	Rad54b (MGP_PahariEiJ_G0023933) #27	Fsbp (MGP_PahariEiJ_G0023934) #28	Gem (MGP_PahariEiJ_G0023935) #29	Cdh17 (MGP_PahariEiJ_G0023936) #30	Pdp1 (MGP_PahariEiJ_G0023937) #31	MGP_PahariEiJ_G0023938	Tmem67 (MGP_PahariEiJ_G0023939) #33	Cibar1 (MGP_PahariEiJ_G0023940) #36	Triqk (MGP_PahariEiJ_G0023941)	Runx1t1 (MGP_PahariEiJ_G0023942) #37	Slc26a7 (MGP_PahariEiJ_G0023943)