Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154816 #22
Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	74								ENSGT00940000160018	ENSGT00940000159978	ENSGT00940000158664	ENSGT00550000074798.a.a	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317 #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Euteleostomi	ANCESTRAL SPECIES	60	ENSGT00940000153189.A	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Sarcopterygii	ANCESTRAL SPECIES	63	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00940000163190	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Tetrapoda	ANCESTRAL SPECIES	10	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Amniota	ANCESTRAL SPECIES	16	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Mammalia	ANCESTRAL SPECIES	81	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT01100000263932	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00950000183101.b #36
Theria	ANCESTRAL SPECIES	53	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT01100000263932	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Eutheria	ANCESTRAL SPECIES	37	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000161017
Boreoeutheria	ANCESTRAL SPECIES	20	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Euarchontoglires	ANCESTRAL SPECIES	20	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Primates	ANCESTRAL SPECIES	31	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Haplorrhini	ANCESTRAL SPECIES	44	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00940000163130	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Simiiformes	ANCESTRAL SPECIES	30	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663.w.a	ENSGT00940000161720
Catarrhini	ANCESTRAL SPECIES	28	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b
Cercopithecidae	ANCESTRAL SPECIES	30	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000163200	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b
Cercopithecinae_a	ANCESTRAL SPECIES	26		ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b
Cercopithecinae_b	ANCESTRAL SPECIES	53	ENSGT00940000155637.t	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT01100000263584.a.a	ENSGT00940000162000.d #37	ENSGT00950000183101.b #36
Olive baboon	MODERN SPECIES	7	ENSPANG00000015871 #7	DGCR2 (ENSPANG00000015766) #8	TSSK2 (ENSPANG00000051095) #9	ESS2 (ENSPANG00000001052) #10	GSC2 (ENSPANG00000001053) #11	SLC25A1 (ENSPANG00000049025) #12	CLTCL1 (ENSPANG00000016741) #13	HIRA (ENSPANG00000003895) #14	MRPL40 (ENSPANG00000007370) #15	C22orf39 (ENSPANG00000031229) #16	UFD1 (ENSPANG00000026172) #17	CDC45 (ENSPANG00000000619) #18	CLDN5 (ENSPANG00000000620) #19	ENSPANG00000001023 #20	GP1BB (ENSPANG00000016740) #21	TBX1 (ENSPANG00000015763) #22	RTL10 (ENSPANG00000016401) #23	TXNRD2 (ENSPANG00000010339) #24	COMT (ENSPANG00000006826) #25	ARVCF (ENSPANG00000007369) #26	TANGO2 (ENSPANG00000017418) #27	DGCR8 (ENSPANG00000019987) #28	TRMT2A (ENSPANG00000024085) #29	RANBP1 (ENSPANG00000024087) #30	ZDHHC8 (ENSPANG00000015762) #31	RTN4R (ENSPANG00000019636) #32	ENSPANG00000050477 #33	MED15 (ENSPANG00000024303) #34	KLHL22 (ENSPANG00000012339) #35	SCARF2 (ENSPANG00000031361) #36	ZNF74 (ENSPANG00000022560) #37
Cercopithecinae_d	ANCESTRAL SPECIES	110	ENSGT00940000155637.t	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT01100000263584.a.a	ENSGT00940000162000.d #37	ENSGT00950000183101.b #36
Sooty mangabey	MODERN SPECIES	341	ENSCATG00000034204	ENSCATG00000029709	DGCR2 (ENSCATG00000031705) #8	TSSK2 (ENSCATG00000018506) #9	ESS2 (ENSCATG00000044330) #10	GSC2 (ENSCATG00000035723) #11	CLTCL1 (ENSCATG00000038670) #13	HIRA (ENSCATG00000030278) #14	ENSCATG00000031418 #15	C22orf39 (ENSCATG00000040241) #16	ENSCATG00000042368 ##17	CLDN5 (ENSCATG00000018548) #19	CDC45 (ENSCATG00000032501) #18	SEPTIN5 (ENSCATG00000040593) #20	GP1BB (ENSCATG00000012778) #21	TBX1 (ENSCATG00000040533) #22	GNB1L (ENSCATG00000033605)	TXNRD2 (ENSCATG00000039276) #24	COMT (ENSCATG00000026178) #25	ARVCF (ENSCATG00000039904) #26	TANGO2 (ENSCATG00000040168) #27	DGCR8 (ENSCATG00000030676) #28	TRMT2A (ENSCATG00000042218) #29	RANBP1 (ENSCATG00000033471) #30	ZDHHC8 (ENSCATG00000034583) #31	CCDC188 (ENSCATG00000030686)	ENSCATG00000044033	RTN4R (ENSCATG00000030255) #32
Drill	MODERN SPECIES	932					DGCR2 (ENSMLEG00000043386) #8	ESS2 (ENSMLEG00000028952) #10	SLC25A1 (ENSMLEG00000039103) #12	CLTCL1 (ENSMLEG00000032739) #13	HIRA (ENSMLEG00000029819) #14	ENSMLEG00000030926 #15	C22orf39 (ENSMLEG00000028236) #16	ENSMLEG00000038529 ##17	CDC45 (ENSMLEG00000040774) #18	CLDN5 (ENSMLEG00000040620) #19	SEPTIN5 (ENSMLEG00000029088) #20	ENSMLEG00000032135 #22	GNB1L (ENSMLEG00000040958)	TXNRD2 (ENSMLEG00000042607) #24	COMT (ENSMLEG00000031497) #25	ARVCF (ENSMLEG00000034443) #26	TANGO2 (ENSMLEG00000038944) #27	DGCR8 (ENSMLEG00000030324) #28	TRMT2A (ENSMLEG00000034259) #29	RANBP1 (ENSMLEG00000038738) #30	ZDHHC8 (ENSMLEG00000002618) #31	CCDC188 (ENSMLEG00000032407)	ENSMLEG00000038471	RTN4R (ENSMLEG00000042754) #32	ENSMLEG00000030131	ENSMLEG00000032346	ZNF74 (ENSMLEG00000003487) #37
Macaca	ANCESTRAL SPECIES	27	ENSGT00390000006265.b.h	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b.g
Pig-tailed macaque	MODERN SPECIES	564	ENSMNEG00000040740	ENSMNEG00000042299	DGCR2 (ENSMNEG00000031352) #8	ESS2 (ENSMNEG00000029888) #10	GSC2 (ENSMNEG00000033269) #11	SLC25A1 (ENSMNEG00000032686) #12	CLTCL1 (ENSMNEG00000041306) #13	HIRA (ENSMNEG00000039592) #14	ENSMNEG00000034050 #15	C22orf39 (ENSMNEG00000029659) #16	UFD1 (ENSMNEG00000039946) #17	CDC45 (ENSMNEG00000030243) #18	CLDN5 (ENSMNEG00000027253) #19	SEPTIN5 (ENSMNEG00000036305) #20	GP1BB (ENSMNEG00000037082) #21	TBX1 (ENSMNEG00000012296) #22	GNB1L (ENSMNEG00000042672)	TXNRD2 (ENSMNEG00000035876) #24	COMT (ENSMNEG00000022654) #25	ARVCF (ENSMNEG00000031345) #26	TANGO2 (ENSMNEG00000030656) #27	DGCR8 (ENSMNEG00000009733) #28	TRMT2A (ENSMNEG00000039235) #29	RANBP1 (ENSMNEG00000030353) #30	ZDHHC8 (ENSMNEG00000028007) #31	CCDC188 (ENSMNEG00000036140)	ENSMNEG00000045533	RTN4R (ENSMNEG00000041125) #32	ENSMNEG00000039558	ENSMNEG00000037360	ZNF74 (ENSMNEG00000032562) #37
Macaca_a	ANCESTRAL SPECIES	23	ENSGT00390000006265.b.h	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.a.a	ENSGT00940000160711 #32	ENSGT00390000006265.b.g	ENSGT00390000017663.x.b.c	ENSGT00940000163677.a.b.a.a.a.a
Rhesus	MODERN SPECIES	1	ENSMMUG00000062702	DGCR2 (ENSMMUG00000019925) #8	TSSK2 (ENSMMUG00000017385) #9	ESS2 (ENSMMUG00000017384) #10	GSC2 (ENSMMUG00000020988) #11	SLC25A1 (ENSMMUG00000005431) #12	CLTCL1 (ENSMMUG00000005432) #13	HIRA (ENSMMUG00000009650) #14	MRPL40 (ENSMMUG00000058871) #15	UFD1 (ENSMMUG00000031106) #17	CDC45 (ENSMMUG00000021904) #18	CLDN5 (ENSMMUG00000060434) #19	ENSMMUG00000064911	GP1BB (ENSMMUG00000040434) #21	SEPTIN5 (ENSMMUG00000017134) #20	TBX1 (ENSMMUG00000017140) #22	GNB1L (ENSMMUG00000017144) #23	TXNRD2 (ENSMMUG00000017147) #24	COMT (ENSMMUG00000054068) #25	ARVCF (ENSMMUG00000017153) #26	TANGO2 (ENSMMUG00000020233) #27	DGCR8 (ENSMMUG00000020098) #28	TRMT2A (ENSMMUG00000020099) #29	RANBP1 (ENSMMUG00000020100) #30	ZDHHC8 (ENSMMUG00000020101) #31	ENSMMUG00000040386	RTN4R (ENSMMUG00000011547) #32	ENSMMUG00000041787	DGCR6L (ENSMMUG00000000560)	ENSMMUG00000050014	ENSMMUG00000053802
Crab-eating macaque	MODERN SPECIES	1	USP18 (ENSMFAG00000002467)	ENSMFAG00000053543	ENSMFAG00000064359	SLC25A1 (ENSMFAG00000035928) #12	ENSMFAG00000065698	CLTCL1 (ENSMFAG00000032523) #13	ENSMFAG00000058504	ENSMFAG00000048274	MRPL40 (ENSMFAG00000032018) #15	HIRA (ENSMFAG00000030575) #14	C22orf39 (ENSMFAG00000040161) #16	UFD1 (ENSMFAG00000040923) #17	CDC45 (ENSMFAG00000045935) #18	SEPTIN5 (ENSMFAG00000038117) #20	ENSMFAG00000061209 #21	TBX1 (ENSMFAG00000045435) #22	GNB1L (ENSMFAG00000045528)	RTL10 (ENSMFAG00000033419) #23	TXNRD2 (ENSMFAG00000039502) #24	COMT (ENSMFAG00000030334) #25	ARVCF (ENSMFAG00000038042) #26	TANGO2 (ENSMFAG00000004021) #27	DGCR8 (ENSMFAG00000033708) #28	TRMT2A (ENSMFAG00000038705) #29	RANBP1 (ENSMFAG00000045937) #30	CCDC188 (ENSMFAG00000039335)	ENSMFAG00000062391	RTN4R (ENSMFAG00000002996) #32	ENSMFAG00000036801	ENSMFAG00000042526	ENSMFAG00000064423
Vervet Monkey	MODERN SPECIES	10	ZNF70 (ENSCSAG00000019274)	ENSCSAG00000011457	ENSCSAG00000011465	DGCR2 (ENSCSAG00000011477) #8	TSSK2 (ENSCSAG00000019273) #9	ESS2 (ENSCSAG00000011488) #10	GSC2 (ENSCSAG00000011500) #11	CLTCL1 (ENSCSAG00000011559) #13	HIRA (ENSCSAG00000011583) #14	MRPL40 (ENSCSAG00000011593) #15	C22orf39 (ENSCSAG00000011597) #16	UFD1 (ENSCSAG00000011687) #17	CDC45 (ENSCSAG00000011723) #18	CLDN5 (ENSCSAG00000019272) #19	SEPTIN5 (ENSCSAG00000011732) #20	TBX1 (ENSCSAG00000011818) #22	GNB1L (ENSCSAG00000011917)	TXNRD2 (ENSCSAG00000011933) #24	COMT (ENSCSAG00000011940) #25	ARVCF (ENSCSAG00000011970) #26	TANGO2 (ENSCSAG00000011981) #27	DGCR8 (ENSCSAG00000011993) #28	TRMT2A (ENSCSAG00000012001) #29	RANBP1 (ENSCSAG00000012086) #30	ZDHHC8 (ENSCSAG00000012164) #31	CCDC188 (ENSCSAG00000012178)	RTN4R (ENSCSAG00000019271) #32	ENSCSAG00000012202	ENSCSAG00000012215	ENSCSAG00000012221	ZNF74 (ENSCSAG00000012224) #37
Rhinopithecus	ANCESTRAL SPECIES	187	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000141073.r.c #30	ENSGT00530000063723.a #29	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32
Golden snub-nosed monkey	MODERN SPECIES	2675																ENSRROG00000042152 #22	GNB1L (ENSRROG00000036236)	TXNRD2 (ENSRROG00000000333) #24	COMT (ENSRROG00000044726) #25	ARVCF (ENSRROG00000041949) #26	TANGO2 (ENSRROG00000035026) #27	DGCR8 (ENSRROG00000029948) #28	TRMT2A (ENSRROG00000036706) #29	ENSRROG00000028972 #30	ZDHHC8 (ENSRROG00000008376) #31	CCDC188 (ENSRROG00000034765)	ENSRROG00000035329	RTN4R (ENSRROG00000034795) #32
Black snub-nosed monkey	MODERN SPECIES	1862	TSSK2 (ENSRBIG00000022728) #9	ESS2 (ENSRBIG00000039387) #10	GSC2 (ENSRBIG00000042464) #11	ENSRBIG00000031759	SLC25A1 (ENSRBIG00000028644) #12	CLTCL1 (ENSRBIG00000039464) #13	HIRA (ENSRBIG00000028086) #14	MRPL40 (ENSRBIG00000023060) #15	C22orf39 (ENSRBIG00000035936) #16	ENSRBIG00000041874 ##17	ENSRBIG00000031663	CDC45 (ENSRBIG00000038253) #18	CLDN5 (ENSRBIG00000029244) #19	SEPTIN5 (ENSRBIG00000041362) #20	GP1BB (ENSRBIG00000028483) #21	TBX1 (ENSRBIG00000042831) #22	GNB1L (ENSRBIG00000039954)	TXNRD2 (ENSRBIG00000029825) #24	COMT (ENSRBIG00000035474) #25	ARVCF (ENSRBIG00000038003) #26	TANGO2 (ENSRBIG00000028257) #27	DGCR8 (ENSRBIG00000015201) #28	TRMT2A (ENSRBIG00000013553) #29	RANBP1 (ENSRBIG00000040239) #30	ZDHHC8 (ENSRBIG00000041762) #31	CCDC188 (ENSRBIG00000035259)	ENSRBIG00000043737
Hominoidea	ANCESTRAL SPECIES	31	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT00940000162000.d #37	ENSGT00950000183101.b #36
Gibbon	MODERN SPECIES	22	ENSNLEG00000034246	ENSNLEG00000028263	DGCR2 (ENSNLEG00000005117) #8	TSSK2 (ENSNLEG00000019208) #9	ESS2 (ENSNLEG00000005148) #10	ENSNLEG00000030109	SLC25A1 (ENSNLEG00000031202) #12	CLTCL1 (ENSNLEG00000005221) #13	HIRA (ENSNLEG00000005303) #14	MRPL40 (ENSNLEG00000005372) #15	C22orf39 (ENSNLEG00000034195) #16	UFD1 (ENSNLEG00000005378) #17	CDC45 (ENSNLEG00000005423) #18	SEPTIN5 (ENSNLEG00000005511) #20	GP1BB (ENSNLEG00000028896) #21	ENSNLEG00000005519 #22	GNB1L (ENSNLEG00000005524)	RTL10 (ENSNLEG00000019209) #23	TXNRD2 (ENSNLEG00000005534) #24	COMT (ENSNLEG00000030236) #25	ARVCF (ENSNLEG00000005621) #26	ENSNLEG00000005635 #27	DGCR8 (ENSNLEG00000005643) #28	TRMT2A (ENSNLEG00000005670) #29	RANBP1 (ENSNLEG00000005684) #30	ZDHHC8 (ENSNLEG00000005693) #31	ENSNLEG00000032706	RTN4R (ENSNLEG00000005706) #32	ENSNLEG00000027550	ENSNLEG00000034901	ENSNLEG00000005737 #37
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT00390000017663.x.b	ENSGT00940000164457.A.d
Orangutan	MODERN SPECIES	13	ENSPPYG00000032945	DGCR2 (ENSPPYG00000011571) #8	TSSK2 (ENSPPYG00000011573) #9	ESS2 (ENSPPYG00000011574) #10	GSC2 (ENSPPYG00000011575) #11	SLC25A1 (ENSPPYG00000029785) #12	CLTCL1 (ENSPPYG00000011576) #13	HIRA (ENSPPYG00000011577) #14	MRPL40 (ENSPPYG00000011578) #15	C22H22orf39 (ENSPPYG00000037291) #16	UFD1 (ENSPPYG00000011580) #17	CDC45 (ENSPPYG00000011581) #18	CLDN5 (ENSPPYG00000011582) #19	SEPTIN5 (ENSPPYG00000011583) #20	GP1BB (ENSPPYG00000011584) #21	TBX1 (ENSPPYG00000011585) #22	ENSPPYG00000033606	RTL10 (ENSPPYG00000032970) #23	GNB1L (ENSPPYG00000011586)	TXNRD2 (ENSPPYG00000011587) #24	ENSPPYG00000011588 #25	ARVCF (ENSPPYG00000011589) #26	TANGO2 (ENSPPYG00000011590) #27	DGCR8 (ENSPPYG00000011591) #28	TRMT2A (ENSPPYG00000011592) #29	RANBP1 (ENSPPYG00000011593) #30	ZDHHC8 (ENSPPYG00000011594) #31	ENSPPYG00000040850	ENSPPYG00000011596	RTN4R (ENSPPYG00000011597) #32	ENSPPYG00000025952
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r.a #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT00390000017663.x.b.b	ENSGT00940000162000.d #37
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r.a #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT00390000017663.x.b.b	ENSGT00940000162000.d #37
Human	MODERN SPECIES	14	PRODH (ENSG00000100033)	DGCR2 (ENSG00000070413) #8	ESS2 (ENSG00000100056) #10	TSSK2 (ENSG00000206203) #9	GSC2 (ENSG00000063515) #11	SLC25A1 (ENSG00000100075) #12	CLTCL1 (ENSG00000070371) #13	HIRA (ENSG00000100084) #14	C22orf39 (ENSG00000242259) #16	MRPL40 (ENSG00000185608) #15	UFD1 (ENSG00000070010) #17	CDC45 (ENSG00000093009) #18	CLDN5 (ENSG00000184113) #19	SEPTIN5 (ENSG00000184702) #20	GP1BB (ENSG00000203618) #21	TBX1 (ENSG00000184058) #22	GNB1L (ENSG00000185838)	RTL10 (ENSG00000215012) #23	TXNRD2 (ENSG00000184470) #24	COMT (ENSG00000093010) #25	ARVCF (ENSG00000099889) #26	TANGO2 (ENSG00000183597) #27	DGCR8 (ENSG00000128191) #28	TRMT2A (ENSG00000099899) #29	RANBP1 (ENSG00000099901) #30	ZDHHC8 (ENSG00000099904) #31	CCDC188 (ENSG00000234409)	RTN4R (ENSG00000040608) #32	DGCR6L (ENSG00000128185)	ZNF74 (ENSG00000185252) #37	SCARF2 (ENSG00000244486) #36
Pan	ANCESTRAL SPECIES	35	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000155193.a.b	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r.a #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D.b	ENSGT00550000076205	ENSGT00940000160711 #32	ENSGT00390000017663.x.b.b	ENSGT00940000162000.d #37
Chimpanzee	MODERN SPECIES	13	ENSPTRG00000043660	TSSK2 (ENSPTRG00000046622) #9	ENSPTRG00000045972	ESS2 (ENSPTRG00000014055) #10	GSC2 (ENSPTRG00000050838) #11	ENSPTRG00000045428	SLC25A1 (ENSPTRG00000014057) #12	CLTCL1 (ENSPTRG00000014058) #13	HIRA (ENSPTRG00000014060) #14	MRPL40 (ENSPTRG00000014061) #15	C22H22orf39 (ENSPTRG00000051117) #16	UFD1 (ENSPTRG00000043162) #17	CDC45 (ENSPTRG00000014064) #18	SEPTIN5 (ENSPTRG00000014066) #20	GP1BB (ENSPTRG00000033843) #21	TBX1 (ENSPTRG00000014067) #22	GNB1L (ENSPTRG00000044843)	ENSPTRG00000049410	TXNRD2 (ENSPTRG00000014069) #24	COMT (ENSPTRG00000014070) #25	ARVCF (ENSPTRG00000014071) #26	TANGO2 (ENSPTRG00000014072) #27	DGCR8 (ENSPTRG00000014073) #28	TRMT2A (ENSPTRG00000014074) #29	RANBP1 (ENSPTRG00000043450) #30	ZDHHC8 (ENSPTRG00000014077) #31	CCDC188 (ENSPTRG00000042466)	ENSPTRG00000038652	RTN4R (ENSPTRG00000014079) #32	DGCR6L (ENSPTRG00000014080)	ENSPTRG00000046891
Bonobo	MODERN SPECIES	13	ENSPPAG00000026954	DGCR2 (ENSPPAG00000027620) #8	TSSK2 (ENSPPAG00000015347) #9	ESS2 (ENSPPAG00000034139) #10	ENSPPAG00000035340 #11	ENSPPAG00000032546	SLC25A1 (ENSPPAG00000003691) #12	CLTCL1 (ENSPPAG00000030517) #13	HIRA (ENSPPAG00000037592) #14	MRPL40 (ENSPPAG00000030349) #15	ENSPPAG00000031774 #16	UFD1 (ENSPPAG00000035639) #17	CDC45 (ENSPPAG00000028685) #18	ENSPPAG00000040414 #19	SEPTIN5 (ENSPPAG00000042516) #20	ENSPPAG00000032550 #22	GNB1L (ENSPPAG00000041675)	ENSPPAG00000035063	TXNRD2 (ENSPPAG00000042002) #24	COMT (ENSPPAG00000027543) #25	ARVCF (ENSPPAG00000027324) #26	TANGO2 (ENSPPAG00000042205) #27	DGCR8 (ENSPPAG00000039507) #28	TRMT2A (ENSPPAG00000043781) #29	RANBP1 (ENSPPAG00000042966) #30	ZDHHC8 (ENSPPAG00000016192) #31	CCDC188 (ENSPPAG00000036009)	ENSPPAG00000006622	RTN4R (ENSPPAG00000005770) #32	ZNF74 (ENSPPAG00000035031) #37	ENSPPAG00000037889 #36
Platyrrhini	ANCESTRAL SPECIES	51	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.d ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663.x	ENSGT00390000017663.w.a	ENSGT00940000161720
Mas night monkey	MODERN SPECIES	760	ENSANAG00000033181	LRRC75B (ENSANAG00000034948)	SNRPD3 (ENSANAG00000026106)	GUCD1 (ENSANAG00000028630)	UPB1 (ENSANAG00000034229)	ENSANAG00000022282	ADORA2A (ENSANAG00000025931)	SPECC1L (ENSANAG00000033753)	HIRA (ENSANAG00000037418) #14	MRPL40 (ENSANAG00000026579) #15	C22orf39 (ENSANAG00000021427) #16	UFD1 (ENSANAG00000031464) ##17	CDC45 (ENSANAG00000034622) #18	SEPTIN5 (ENSANAG00000025950) #20	GP1BB (ENSANAG00000033423) #21	TBX1 (ENSANAG00000024241) #22	GNB1L (ENSANAG00000015533)	TXNRD2 (ENSANAG00000020052) #24	COMT (ENSANAG00000024217) #25	ARVCF (ENSANAG00000029182) #26	TANGO2 (ENSANAG00000035133) #27	DGCR8 (ENSANAG00000013710) #28	TRMT2A (ENSANAG00000035461) #29	ENSANAG00000024454 #30	ZDHHC8 (ENSANAG00000032330) #31	CCDC188 (ENSANAG00000028823)	RTN4R (ENSANAG00000032599) #32	ENSANAG00000034686	ENSANAG00000025732	ENSANAG00000031012	ENSANAG00000033260
Cebidae	ANCESTRAL SPECIES	44	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.d ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663.x	ENSGT00390000017663.w.a	ENSGT00940000161720
Marmoset	MODERN SPECIES		TSSK2 (ENSCJAG00000064480) #9	ESS2 (ENSCJAG00000001679) #10	GSC2 (ENSCJAG00000065946) #11	ENSCJAG00000001657 #12	CLTCL1 (ENSCJAG00000047873) #13	ENSCJAG00000022184 #33	HIRA (ENSCJAG00000001591) #14	MRPL40 (ENSCJAG00000001584) #15	ENSCJAG00000044605 #16	UFD1 (ENSCJAG00000001566) ##17	CDC45 (ENSCJAG00000001523) #18	CLDN5 (ENSCJAG00000021820) #19	SEPTIN5 (ENSCJAG00000031147) #20	GP1BB (ENSCJAG00000001520) #21	ENSCJAG00000055379	TBX1 (ENSCJAG00000014591) #22	GNB1L (ENSCJAG00000037354)	TXNRD2 (ENSCJAG00000014546) #24	COMT (ENSCJAG00000014538) #25	ARVCF (ENSCJAG00000014479) #26	TANGO2 (ENSCJAG00000010829) #27	DGCR8 (ENSCJAG00000010780) #28	TRMT2A (ENSCJAG00000010758) #29	RANBP1 (ENSCJAG00000010749) #30	ZDHHC8 (ENSCJAG00000010730) #31	CCDC188 (ENSCJAG00000033357)	RTN4R (ENSCJAG00000047001) #32	ENSCJAG00000010707	ENSCJAG00000073511	IL17RA (ENSCJAG00000006350)	TMEM121B (ENSCJAG00000047740)
Cebidae_a	ANCESTRAL SPECIES	97	ENSGT00940000159598 #35	ENSGT00730000111140 #34	ENSGT00390000017655 #8	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073.r #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663.x	ENSGT00390000017663.w.a	ENSGT00940000161720
Capuchin	MODERN SPECIES	461	MED15 (ENSCCAG00000036908) #34	ENSCCAG00000037479	GAB4 (ENSCCAG00000033617)	DGCR2 (ENSCCAG00000030344) #8	ENSCCAG00000019387 #9	ESS2 (ENSCCAG00000021557) #10	GSC2 (ENSCCAG00000027479) #11	SLC25A1 (ENSCCAG00000037876) #12	CLTCL1 (ENSCCAG00000018635) #13	HIRA (ENSCCAG00000025576) #14	MRPL40 (ENSCCAG00000037694) #15	C22orf39 (ENSCCAG00000027208) #16	UFD1 (ENSCCAG00000011104) ##17	CDC45 (ENSCCAG00000032172) #18	SEPTIN5 (ENSCCAG00000036918) #20	TBX1 (ENSCCAG00000027674) #22	GNB1L (ENSCCAG00000019728)	TXNRD2 (ENSCCAG00000034707) #24	COMT (ENSCCAG00000033173) #25	ARVCF (ENSCCAG00000036097) #26	TANGO2 (ENSCCAG00000023952) #27	DGCR8 (ENSCCAG00000036620) #28	TRMT2A (ENSCCAG00000025578) #29	RANBP1 (ENSCCAG00000035621) #30	ZDHHC8 (ENSCCAG00000022342) #31	CCDC188 (ENSCCAG00000028855)	RTN4R (ENSCCAG00000018734) #32	ENSCCAG00000032010	ENSCCAG00000025633
Bolivian squirrel monkey	MODERN SPECIES	206	MED15 (ENSSBOG00000028827) #34	KLHL22 (ENSSBOG00000022717) #35	SCARF2 (ENSSBOG00000021027) #36	ZNF74 (ENSSBOG00000035690) #37	ENSSBOG00000033715	ENSSBOG00000013406 #33	ENSSBOG00000030944	HIRA (ENSSBOG00000021149) #14	ENSSBOG00000013817	MRPL40 (ENSSBOG00000031050) #15	C22orf39 (ENSSBOG00000031146) #16	ENSSBOG00000027274 ##17	CDC45 (ENSSBOG00000018948) #18	SEPTIN5 (ENSSBOG00000027910) #20	GP1BB (ENSSBOG00000034037) #21	ENSSBOG00000003899 #22	GNB1L (ENSSBOG00000029828)	TXNRD2 (ENSSBOG00000023176) #24	COMT (ENSSBOG00000032251) #25	ARVCF (ENSSBOG00000024306) #26	TANGO2 (ENSSBOG00000024655) #27	DGCR8 (ENSSBOG00000022975) #28	TRMT2A (ENSSBOG00000024388) #29	ENSSBOG00000035235 #30	ZDHHC8 (ENSSBOG00000027282) #31	CCDC188 (ENSSBOG00000022842)	RTN4R (ENSSBOG00000032491) #32	ENSSBOG00000034358	ENSSBOG00000034711	USP18 (ENSSBOG00000035368)	TUBA8 (ENSSBOG00000021079)
Tarsier	MODERN SPECIES	4717										HIRA (ENSTSYG00000003663) #14	MRPL40 (ENSTSYG00000014747) #15	CUNH22orf39 (ENSTSYG00000028865) #16	UFD1 (ENSTSYG00000014750) #17	CDC45 (ENSTSYG00000014754) #18	SEPT5 (ENSTSYG00000037551) #20	ENSTSYG00000032380 #22	GNB1L (ENSTSYG00000034272)	TXNRD2 (ENSTSYG00000028849) #24	COMT (ENSTSYG00000013593) #25	ARVCF (ENSTSYG00000010118) #26	TANGO2 (ENSTSYG00000008824) #27	DGCR8 (ENSTSYG00000027809) #28	TRMT2A (ENSTSYG00000027872) #29	RANBP1 (ENSTSYG00000013573) #30	ZDHHC8 (ENSTSYG00000035973) #31	CCDC188 (ENSTSYG00000027690)	RTN4R (ENSTSYG00000029385) #32	ENSTSYG00000027023	ENSTSYG00000031265
Strepsirrhini	ANCESTRAL SPECIES	39	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Lemuriformes	ANCESTRAL SPECIES	57	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Lemuriformes_a	ANCESTRAL SPECIES	140	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Coquerels sifaka	MODERN SPECIES	608						ESS2 (ENSPCOG00000026937) #10	ENSPCOG00000027700 #12	CLTCL1 (ENSPCOG00000020137) #13	HIRA (ENSPCOG00000018283) #14	MRPL40 (ENSPCOG00000014413) #15	C22orf39 (ENSPCOG00000005831) #16	UFD1 (ENSPCOG00000024457) #17	CDC45 (ENSPCOG00000024018) #18	SEPTIN5 (ENSPCOG00000012479) #20	GP1BB (ENSPCOG00000022356) #21	TBX1 (ENSPCOG00000020373) #22	GNB1L (ENSPCOG00000025209)	TXNRD2 (ENSPCOG00000026009) #24	COMT (ENSPCOG00000021200) #25	ARVCF (ENSPCOG00000021466) #26	TANGO2 (ENSPCOG00000021728) #27	DGCR8 (ENSPCOG00000025377) #28	TRMT2A (ENSPCOG00000015293) #29	RANBP1 (ENSPCOG00000028183) #30	ZDHHC8 (ENSPCOG00000016265) #31	CCDC188 (ENSPCOG00000022639)	RTN4R (ENSPCOG00000013486) #32	ENSPCOG00000017029	ENSPCOG00000016489	ENSPCOG00000017222	ENSPCOG00000021220
Greater bamboo lemur	MODERN SPECIES	416														SEPTIN5 (ENSPSMG00000001186) #20	GP1BB (ENSPSMG00000001216) #21	TBX1 (ENSPSMG00000001290) #22	GNB1L (ENSPSMG00000001334)	TXNRD2 (ENSPSMG00000001563) #24	COMT (ENSPSMG00000001658) #25	ARVCF (ENSPSMG00000001850) #26	TANGO2 (ENSPSMG00000002263) #27	DGCR8 (ENSPSMG00000002393) #28	TRMT2A (ENSPSMG00000002486) #29	RANBP1 (ENSPSMG00000002572) #30	ZDHHC8 (ENSPSMG00000002679) #31	CCDC188 (ENSPSMG00000002830)	RTN4R (ENSPSMG00000002832) #32	ENSPSMG00000002892	ENSPSMG00000003012
Mouse lemur	MODERN SPECIES	131	ZNF74 (ENSMICG00000032821) #37	DGCR2 (ENSMICG00000011635) #8	TSSK2 (ENSMICG00000008686) #9	ESS2 (ENSMICG00000000068) #10	GSC2 (ENSMICG00000043796) #11	SLC25A1 (ENSMICG00000017090) #12	ENSMICG00000026758	HIRA (ENSMICG00000013496) #14	MRPL40 (ENSMICG00000046066) #15	C22orf39 (ENSMICG00000013560) #16	UFD1 (ENSMICG00000013566) #17	CDC45 (ENSMICG00000013589) #18	ENSMICG00000034772	SEPTIN5 (ENSMICG00000028407) #20	GP1BB (ENSMICG00000043691) #21	TBX1 (ENSMICG00000028907) #22	GNB1L (ENSMICG00000034017)	TXNRD2 (ENSMICG00000016540) #24	COMT (ENSMICG00000015309) #25	ARVCF (ENSMICG00000015322) #26	TANGO2 (ENSMICG00000005166) #27	DGCR8 (ENSMICG00000030145) #28	TRMT2A (ENSMICG00000017621) #29	RANBP1 (ENSMICG00000017622) #30	ZDHHC8 (ENSMICG00000037526) #31	CCDC188 (ENSMICG00000032879)	RTN4R (ENSMICG00000027043) #32	ENSMICG00000004016	ENSMICG00000035160
Bushbaby	MODERN SPECIES	333	ZNF74 (ENSOGAG00000025857) #37	DGCR2 (ENSOGAG00000001352) #8	TSSK1B (ENSOGAG00000032224)	TSSK2 (ENSOGAG00000007948) #9	ESS2 (ENSOGAG00000007950) #10	GSC2 (ENSOGAG00000029019) #11	SLC25A1 (ENSOGAG00000001361) #12	CLTCL1 (ENSOGAG00000001362) #13	HIRA (ENSOGAG00000015079) #14	MRPL40 (ENSOGAG00000030071) #15	C22orf39 (ENSOGAG00000015092) #16	UFD1 (ENSOGAG00000015095) #17	CDC45 (ENSOGAG00000015102) #18	CLDN5 (ENSOGAG00000024947) #19	SEPTIN5 (ENSOGAG00000026834) #20	TBX1 (ENSOGAG00000003596) #22	GNB1L (ENSOGAG00000024293)	TXNRD2 (ENSOGAG00000029571) #24	ENSOGAG00000026719 #25	ARVCF (ENSOGAG00000007097) #26	TANGO2 (ENSOGAG00000004850) #27	DGCR8 (ENSOGAG00000004851) #28	TRMT2A (ENSOGAG00000009941) #29	RANBP1 (ENSOGAG00000034333) #30	ZDHHC8 (ENSOGAG00000027995) #31	ENSOGAG00000029421	RTN4R (ENSOGAG00000033465) #32	ENSOGAG00000014819	ENSOGAG00000014817
Euarchontoglires_A	ANCESTRAL SPECIES	18	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Glires	ANCESTRAL SPECIES	19	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Rodentia	ANCESTRAL SPECIES	20	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Rodentia_B	ANCESTRAL SPECIES	44	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Myomorpha	ANCESTRAL SPECIES	65								ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Muroidea	ANCESTRAL SPECIES	61								ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00530000063947.B	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000154345.b	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000154345.b	ENSGT00940000163715.a	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00940000159676	ENSGT00950000182899.C.a	ENSGT01090000259995.b.b.a.a.a.h.a.a.b	ENSGT01090000259995.b.b.b	ENSGT01090000259995.b.b.a.a.b	ENSGT01090000259995.b.b.a.a.a.g	ENSGT01090000259995.b.a.a.a.a.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Northern American deer mouse	MODERN SPECIES	3	ENSPEMG00000027859	ENSPEMG00000028476	ENSPEMG00000026643	ENSPEMG00000030529	ENSPEMG00000026657	ENSPEMG00000027648	ENSPEMG00000026621	ENSPEMG00000011377 #14	Mrpl40 (ENSPEMG00000017933) #15	2510002D24Rik (ENSPEMG00000003609) #16	Ufd1 (ENSPEMG00000011595) #17	Cdc45 (ENSPEMG00000004377) #18	Cldn5 (ENSPEMG00000000920) #19	Septin5 (ENSPEMG00000013636) #20	Gp1bb (ENSPEMG00000016143) #21	Tbx1 (ENSPEMG00000005836) #22	Gnb1l (ENSPEMG00000009247)	ENSPEMG00000030443 #25	Txnrd2 (ENSPEMG00000000594) #24	ENSPEMG00000024477 #25	Arvcf (ENSPEMG00000014202) #26	Tango2 (ENSPEMG00000012488) #27	Dgcr8 (ENSPEMG00000018266) #28	ENSPEMG00000019211	Trmt2a (ENSPEMG00000011013) #29	Ranbp1 (ENSPEMG00000019257) #30	Zdhhc8 (ENSPEMG00000012434) #31	ENSPEMG00000005605	Rtn4r (ENSPEMG00000014362) #32	Prodh (ENSPEMG00000005099)	Dgcr6 (ENSPEMG00000012492)
Prairie vole	MODERN SPECIES	151														Septin5 (ENSMOCG00000000071) #20	Gp1bb (ENSMOCG00000019806) #21	Tbx1 (ENSMOCG00000014698) #22	Gnb1l (ENSMOCG00000001278)	ENSMOCG00000004002	Txnrd2 (ENSMOCG00000000725) #24	Comt (ENSMOCG00000012717) #25	Arvcf (ENSMOCG00000014542) #26	Tango2 (ENSMOCG00000008779) #27	Dgcr8 (ENSMOCG00000014743) #28	Trmt2a (ENSMOCG00000002597) #29	Ranbp1 (ENSMOCG00000000658) #30	Zdhhc8 (ENSMOCG00000012177) #31	ENSMOCG00000017067	Rtn4r (ENSMOCG00000018155) #32	Prodh (ENSMOCG00000019417)	Dgcr6 (ENSMOCG00000020153)	ENSMOCG00000010728
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00530000063947.B	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000163715.a	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Chinese hamster chok1gshd	MODERN SPECIES	382	Or2l5 (ENSCGRG00001002256)	ENSCGRG00001005083	ENSCGRG00001001770	ENSCGRG00001002027	ENSCGRG00001002357	ENSCGRG00001010395	ENSCGRG00001009833	Hira (ENSCGRG00001019509) #14	Mrpl40 (ENSCGRG00001019957) #15	2510002D24Rik (ENSCGRG00001013807) #16	ENSCGRG00001016282 #17	Cdc45 (ENSCGRG00001017733) #18	Cldn5 (ENSCGRG00001010860) #19	Septin5 (ENSCGRG00001018409) #20	Gp1bb (ENSCGRG00001011927) #21	Tbx1 (ENSCGRG00001018936) #22	Gnb1l (ENSCGRG00001011168)	Txnrd2 (ENSCGRG00001018147) #24	Comt (ENSCGRG00001019692) #25	Arvcf (ENSCGRG00001008113) #26	Tango2 (ENSCGRG00001012308) #27	Dgcr8 (ENSCGRG00001000935) #28	ENSCGRG00001010886	Trmt2a (ENSCGRG00001016592) #29	Ranbp1 (ENSCGRG00001019070) #30	Zdhhc8 (ENSCGRG00001015576) #31	ENSCGRG00001012235	Rtn4r (ENSCGRG00001002500) #32	Prodh (ENSCGRG00001012080)	Dgcr6 (ENSCGRG00001004677)	Slc25a1 (ENSCGRG00001024096) #12
Golden Hamster	MODERN SPECIES	690	Slc7a11 (ENSMAUG00000015486)	Pcdh18 (ENSMAUG00000008607)	Pkp2 (ENSMAUG00000010450)	Yars2 (ENSMAUG00000012334)	Dnm1l (ENSMAUG00000010409)	Fgd4 (ENSMAUG00000009523)	Mzt2 (ENSMAUG00000011034)	Hira (ENSMAUG00000013816) #14	Mrpl40 (ENSMAUG00000015350) #15	2510002D24Rik (ENSMAUG00000006315) #16	Ufd1 (ENSMAUG00000011444) #17	Cdc45 (ENSMAUG00000014100) #18	Cldn5 (ENSMAUG00000017811) #19	Septin5 (ENSMAUG00000014786) #20	Gp1bb (ENSMAUG00000016778) #21	Tbx1 (ENSMAUG00000019560) #22	Gnb1l (ENSMAUG00000000218)	ENSMAUG00000016392	Txnrd2 (ENSMAUG00000001013) #24	Comt (ENSMAUG00000013288) #25	Arvcf (ENSMAUG00000010039) #26	Tango2 (ENSMAUG00000019754) #27	Dgcr8 (ENSMAUG00000000517) #28	Trmt2a (ENSMAUG00000005655) #29	Ranbp1 (ENSMAUG00000000530) #30	Zdhhc8 (ENSMAUG00000000570) #31	ENSMAUG00000001223	Rtn4r (ENSMAUG00000004777) #32	Prodh (ENSMAUG00000013845)	Dgcr6 (ENSMAUG00000017452)	ENSMAUG00000018193
Murinae	ANCESTRAL SPECIES	13	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781	ENSGT00940000161640	ENSGT00940000153120.k.a.a	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00550000074856 #12
Mus	ANCESTRAL SPECIES	13	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00950000186516	ENSGT00950000186499	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511.a #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Mus_A	ANCESTRAL SPECIES	18	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781	ENSGT00950000186516	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511.a #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Ryukyu mouse	MODERN SPECIES	7	MGP_CAROLIEiJ_G0020560	Or2m12 (MGP_CAROLIEiJ_G0020559)	Iglj4 (MGP_CAROLIEiJ_G0000023)	Iglc4 (MGP_CAROLIEiJ_G0000011)	Iglj1 (MGP_CAROLIEiJ_G0000022)	Iglc1 (MGP_CAROLIEiJ_G0000010)	MGP_CAROLIEiJ_G0020558 #14	Mrpl40 (MGP_CAROLIEiJ_G0020557) #15	MGP_CAROLIEiJ_G0020556 #16	2510002D24Rik (MGP_CAROLIEiJ_G0020555) #16	Ufd1 (MGP_CAROLIEiJ_G0020554) #17	Cdc45 (MGP_CAROLIEiJ_G0020553) #18	Cldn5 (MGP_CAROLIEiJ_G0020552) #19	Septin5 (MGP_CAROLIEiJ_G0020551) #20	Gp1bb (MGP_CAROLIEiJ_G0020550) #21	Tbx1 (MGP_CAROLIEiJ_G0020549) #22	MGP_CAROLIEiJ_G0020548	MGP_CAROLIEiJ_G0020547	Txnrd2 (MGP_CAROLIEiJ_G0020546) #24	Comt (MGP_CAROLIEiJ_G0020545) #25	Arvcf (MGP_CAROLIEiJ_G0020544) #26	MGP_CAROLIEiJ_G0020543 #27	Dgcr8 (MGP_CAROLIEiJ_G0020542) #28	Trmt2a (MGP_CAROLIEiJ_G0020541) #29	Ranbp1 (MGP_CAROLIEiJ_G0020540) #30	Zdhhc8 (MGP_CAROLIEiJ_G0020539) #31	MGP_CAROLIEiJ_G0020538	Rtn4r (MGP_CAROLIEiJ_G0020537) #32	Prodh (MGP_CAROLIEiJ_G0020536)	Dgcr6 (MGP_CAROLIEiJ_G0020535)	Slc25a1 (MGP_CAROLIEiJ_G0020534) #12
Mus_B	ANCESTRAL SPECIES	18	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781.i	ENSGT00940000153934.a.a	ENSGT00940000153307.d.b.b	ENSGT00950000186516	ENSGT00940000153307.d.b.a	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511.a #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Mouse	MODERN SPECIES	7	Iglv1 (ENSMUSG00000076934)	Iglj3 (ENSMUSG00000105231)	Iglj3p (ENSMUSG00000106405)	Iglc3 (ENSMUSG00000105547)	Iglj1 (ENSMUSG00000106668)	Iglc1 (ENSMUSG00000105906)	Hira (ENSMUSG00000022702) #14	Mrpl40 (ENSMUSG00000022706) #15	2510002D24Rik (ENSMUSG00000071632) #16	Ufd1 (ENSMUSG00000005262) #17	Cdc45 (ENSMUSG00000000028) #18	Cldn5 (ENSMUSG00000041378) #19	Septin5 (ENSMUSG00000072214) #20	Gm49601 (ENSMUSG00000116594)	Gp1bb (ENSMUSG00000050761) #21	Tbx1 (ENSMUSG00000009097) #22	Gnb1l (ENSMUSG00000000884)	Txnrd2 (ENSMUSG00000075704) #24	Comt (ENSMUSG00000000326) #25	Arvcf (ENSMUSG00000118669) #26	Tango2 (ENSMUSG00000013539) #27	Dgcr8 (ENSMUSG00000022718) #28	Trmt2a (ENSMUSG00000022721) #29	Ranbp1 (ENSMUSG00000005732) #30	Zdhhc8 (ENSMUSG00000060166) #31	Ccdc188 (ENSMUSG00000090777)	Rtn4r (ENSMUSG00000043811) #32	Prodh (ENSMUSG00000003526)	Dgcr6 (ENSMUSG00000003531)	Vpreb1b (ENSMUSG00000059280)	Slc25a1 (ENSMUSG00000003528) #12
Mus_C	ANCESTRAL SPECIES	12	ENSGT01090000259995.b.b.a.a.b	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00950000186516	ENSGT00950000186499	ENSGT00940000153307.d.a.b	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511.a #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
spretus	MODERN SPECIES	7	MGP_SPRETEiJ_G0000072	Or2m12 (MGP_SPRETEiJ_G0021454)	Iglj1 (MGP_SPRETEiJ_G0000024)	Iglj4 (MGP_SPRETEiJ_G0000023)	MGP_SPRETEiJ_G0000011	MGP_SPRETEiJ_G0000010	Hira (MGP_SPRETEiJ_G0021453) #14	Mrpl40 (MGP_SPRETEiJ_G0021452) #15	MGP_SPRETEiJ_G0021451 #16	MGP_SPRETEiJ_G0021450	Ufd1 (MGP_SPRETEiJ_G0021449) #17	Cldn5 (MGP_SPRETEiJ_G0021448) #19	Cdc45 (MGP_SPRETEiJ_G0021447) #18	Septin5 (MGP_SPRETEiJ_G0021446) #20	Gp1bb (MGP_SPRETEiJ_G0021445) #21	Tbx1 (MGP_SPRETEiJ_G0021444) #22	MGP_SPRETEiJ_G0021443	MGP_SPRETEiJ_G0021442	Txnrd2 (MGP_SPRETEiJ_G0021441) #24	Comt (MGP_SPRETEiJ_G0021440) #25	Arvcf (MGP_SPRETEiJ_G0021439) #26	Tango2 (MGP_SPRETEiJ_G0021438) #27	Dgcr8 (MGP_SPRETEiJ_G0021437) #28	Trmt2a (MGP_SPRETEiJ_G0021436) #29	Ranbp1 (MGP_SPRETEiJ_G0021435) #30	Zdhhc8 (MGP_SPRETEiJ_G0021434) #31	MGP_SPRETEiJ_G0021433	Rtn4r (MGP_SPRETEiJ_G0021432) #32	Prodh (MGP_SPRETEiJ_G0021431)	Dgcr6 (MGP_SPRETEiJ_G0021430)	Slc25a1 (MGP_SPRETEiJ_G0021429) #12
Steppe mouse	MODERN SPECIES	3260			Iglc3 (ENSMSIG00000023001)	ENSMSIG00000022991	ENSMSIG00000022974	Hira (ENSMSIG00000022901) #14	Mrpl40 (ENSMSIG00000022880) #15	2510002D24Rik (ENSMSIG00000022858) #16	Ufd1 (ENSMSIG00000022828) #17	Cdc45 (ENSMSIG00000022750) #18	Cldn5 (ENSMSIG00000022737) #19	ENSMSIG00000022731	ENSMSIG00000022717	Septin5 (ENSMSIG00000022599) #20	Gp1bb (ENSMSIG00000022590) #21	ENSMSIG00000022581 #22	Gnb1l (ENSMSIG00000022539)	Txnrd2 (ENSMSIG00000020857) #24	Comt (ENSMSIG00000020818) #25	Arvcf (ENSMSIG00000020598) #26	Tango2 (ENSMSIG00000020557) #27	Dgcr8 (ENSMSIG00000020457) #28	ENSMSIG00000020450	Trmt2a (ENSMSIG00000020306) #29	ENSMSIG00000020271 #30	Zdhhc8 (ENSMSIG00000020222) #31	Ccdc188 (ENSMSIG00000020194)	Rtn4r (ENSMSIG00000020177) #32	Prodh (ENSMSIG00000020147)	Dgcr6 (ENSMSIG00000020095)	ENSMSIG00000020089
Shrew mouse	MODERN SPECIES	3	MGP_PahariEiJ_G0016265	Or2m12 (MGP_PahariEiJ_G0016264)	MGP_PahariEiJ_G0000019	MGP_PahariEiJ_G0000018	MGP_PahariEiJ_G0000004	MGP_PahariEiJ_G0000003	Hira (MGP_PahariEiJ_G0016263) #14	Mrpl40 (MGP_PahariEiJ_G0016262) #15	MGP_PahariEiJ_G0016261 #16	2510002D24Rik (MGP_PahariEiJ_G0016260) #16	Ufd1 (MGP_PahariEiJ_G0016259) #17	Cdc45 (MGP_PahariEiJ_G0016258) #18	Cldn5 (MGP_PahariEiJ_G0016257) #19	Septin5 (MGP_PahariEiJ_G0016256) #20	Gp1bb (MGP_PahariEiJ_G0016255) #21	Tbx1 (MGP_PahariEiJ_G0016254) #22	MGP_PahariEiJ_G0016253	MGP_PahariEiJ_G0016252	Txnrd2 (MGP_PahariEiJ_G0016251) #24	Comt (MGP_PahariEiJ_G0016250) #25	Arvcf (MGP_PahariEiJ_G0016249) #26	MGP_PahariEiJ_G0016248 #27	Dgcr8 (MGP_PahariEiJ_G0016247) #28	Trmt2a (MGP_PahariEiJ_G0016246) #29	Ranbp1 (MGP_PahariEiJ_G0016245) #30	Zdhhc8 (MGP_PahariEiJ_G0016244) #31	MGP_PahariEiJ_G0016243	Rtn4r (MGP_PahariEiJ_G0016242) #32	Prodh (MGP_PahariEiJ_G0016241)	Dgcr6 (MGP_PahariEiJ_G0016240)	Slc25a1 (MGP_PahariEiJ_G0016239) #12
Rat	MODERN SPECIES	2	ENSRNOG00000069898	ENSRNOG00000069249	ENSRNOG00000064589	RGD1564318 (ENSRNOG00000050000)	ENSRNOG00000070540	Iglc1 (ENSRNOG00000058590)	Hira (ENSRNOG00000045770) #14	Mrpl40 (ENSRNOG00000049686) #15	LOC498122 (ENSRNOG00000048861)	Ufd1 (ENSRNOG00000047394) #17	Cdc45 (ENSRNOG00000070046) #18	Cdc45 (ENSRNOG00000050071) #19	LOC100362453 (ENSRNOG00000001893)	Septin5 (ENSRNOG00000029912) #20	Gp1bb (ENSRNOG00000046981) #21	Tbx1 (ENSRNOG00000001892) #22	Gnb1l (ENSRNOG00000001891)	Txnrd2 (ENSRNOG00000001890) #24	Comt (ENSRNOG00000001889) #25	Arvcf (ENSRNOG00000001888) #26	Tango2 (ENSRNOG00000030245) #27	Dgcr8 (ENSRNOG00000001886) #28	Trmt2a (ENSRNOG00000001885) #29	ENSRNOG00000066515	Ranbp1 (ENSRNOG00000001884) #30	Zdhhc8 (ENSRNOG00000021891) #31	Ccdc188 (ENSRNOG00000042711)	Rtn4r (ENSRNOG00000030920) #32	Prodh (ENSRNOG00000000281)	Dgcr6 (ENSRNOG00000001880)	Vpreb2 (ENSRNOG00000001839)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1216								Hira (ENSNGAG00000001112) #14	Mrpl40 (ENSNGAG00000000304) #15	2510002D24Rik (ENSNGAG00000000172) #16	Ufd1 (ENSNGAG00000017827) #17	Cdc45 (ENSNGAG00000015793) #18	Cldn5 (ENSNGAG00000012973) #19	Septin5 (ENSNGAG00000013782) #20	Gp1bb (ENSNGAG00000013250) #21	Tbx1 (ENSNGAG00000013088) #22	Gnb1l (ENSNGAG00000012919)	Txnrd2 (ENSNGAG00000012955) #24	Comt (ENSNGAG00000007480) #25	Arvcf (ENSNGAG00000012527) #26	Tango2 (ENSNGAG00000010731) #27	Dgcr8 (ENSNGAG00000003283) #28	Trmt2a (ENSNGAG00000015041) #29	Ranbp1 (ENSNGAG00000013821) #30	Zdhhc8 (ENSNGAG00000012851) #31	ENSNGAG00000012719	Rtn4r (ENSNGAG00000012587) #32	Prodh (ENSNGAG00000011182)	Dgcr6 (ENSNGAG00000009889)	ENSNGAG00000009497	ENSNGAG00000008705
Lesser Egyptian jerboa	MODERN SPECIES	194	Ypel1 (ENSJJAG00000022948)	ENSJJAG00000022883	Mapk1 (ENSJJAG00000022565)	Ppm1f (ENSJJAG00000019897)	Top3b (ENSJJAG00000019346)	ENSJJAG00000019063	Hira (ENSJJAG00000018442) #14	Mrpl40 (ENSJJAG00000017905) #15	2510002D24Rik (ENSJJAG00000017728) #16	Ufd1 (ENSJJAG00000016109) #17	Cdc45 (ENSJJAG00000015106) #18	Cldn5 (ENSJJAG00000013151) #19	ENSJJAG00000013111	Septin5 (ENSJJAG00000000091) #20	Gp1bb (ENSJJAG00000023646) #21	Tbx1 (ENSJJAG00000023527) #22	Gnb1l (ENSJJAG00000023212)	Txnrd2 (ENSJJAG00000019775) #24	Comt (ENSJJAG00000017314) #25	Arvcf (ENSJJAG00000015525) #26	Tango2 (ENSJJAG00000014545) #27	Dgcr8 (ENSJJAG00000014171) #28	Trmt2a (ENSJJAG00000013116) #29	ENSJJAG00000011468 #30	Zdhhc8 (ENSJJAG00000010431) #31	ENSJJAG00000018048	Rtn4r (ENSJJAG00000017834) #32	Prodh (ENSJJAG00000017416)	Dgcr6 (ENSJJAG00000014265)
Rodentia_A	ANCESTRAL SPECIES	19	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Sciuridae	ANCESTRAL SPECIES	42	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Marmotini	ANCESTRAL SPECIES	53	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #23	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Marmotini_b	ANCESTRAL SPECIES	54	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #23	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000235464
Arctic ground squirrel	MODERN SPECIES	252	DGCR2 (ENSUPAG00010011875) #8	TSSK1B (ENSUPAG00010011872)	TSSK2 (ENSUPAG00010011870) #9	ESS2 (ENSUPAG00010011854) #10	GSC2 (ENSUPAG00010011849) #11	SLC25A1 (ENSUPAG00010011833) #12	CLTCL1 (ENSUPAG00010011775) #13	HIRA (ENSUPAG00010011725) #14	MRPL40 (ENSUPAG00010011716) #15	C22orf39 (ENSUPAG00010011693) #16	UFD1 (ENSUPAG00010011672) #17	CDC45 (ENSUPAG00010011643) #18	CLDN5 (ENSUPAG00010011641) #19	GP1BB (ENSUPAG00010011635) #21	SEPTIN5 (ENSUPAG00010011595) #20	TBX1 (ENSUPAG00010011554) #22	RTL10 (ENSUPAG00010011551) #23	ENSUPAG00010011513	TXNRD2 (ENSUPAG00010011325) #24	COMT (ENSUPAG00010011294) #25	ARVCF (ENSUPAG00010011258) #26	TANGO2 (ENSUPAG00010011235) #27	DGCR8 (ENSUPAG00010011207) #28	TRMT2A (ENSUPAG00010011153) #29	ENSUPAG00010011129	ZDHHC8 (ENSUPAG00010011116) #31	ENSUPAG00010011111	RTN4R (ENSUPAG00010011108) #32	ENSUPAG00010011098	ENSUPAG00010011090	ENSUPAG00010011089
Squirrel	MODERN SPECIES	219	TSSK1B (ENSSTOG00000027168)	TSSK2 (ENSSTOG00000027876) #9	ESS2 (ENSSTOG00000002817) #10	GSC2 (ENSSTOG00000021301) #11	SLC25A1 (ENSSTOG00000002825) #12	CLTCL1 (ENSSTOG00000002838) #13	HIRA (ENSSTOG00000002864) #14	MRPL40 (ENSSTOG00000002887) #15	C22orf39 (ENSSTOG00000023959) #16	UFD1 (ENSSTOG00000002896) #17	CDC45 (ENSSTOG00000002917) #18	CLDN5 (ENSSTOG00000023943) #19	ENSSTOG00000019936	SEPTIN5 (ENSSTOG00000010725) #20	GP1BB (ENSSTOG00000028299) #21	TBX1 (ENSSTOG00000004505) #22	GNB1L (ENSSTOG00000022761)	ENSSTOG00000022331	TXNRD2 (ENSSTOG00000011425) #24	ENSSTOG00000019977	COMT (ENSSTOG00000027573) #25	ARVCF (ENSSTOG00000014869) #26	TANGO2 (ENSSTOG00000014461) #27	DGCR8 (ENSSTOG00000023936) #28	TRMT2A (ENSSTOG00000014487) #29	ENSSTOG00000026840 #30	ZDHHC8 (ENSSTOG00000021349) #31	ENSSTOG00000023515	RTN4R (ENSSTOG00000021308) #32	ENSSTOG00000006384	ENSSTOG00000006363
Alpin marmot	MODERN SPECIES	67	DGCR2 (ENSMMMG00000002630) #8	TSSK1B (ENSMMMG00000002708)	TSSK2 (ENSMMMG00000002712) #9	ESS2 (ENSMMMG00000002719) #10	GSC2 (ENSMMMG00000002737) #11	SLC25A1 (ENSMMMG00000002744) #12	CLTCL1 (ENSMMMG00000002805) #13	HIRA (ENSMMMG00000003121) #14	MRPL40 (ENSMMMG00000003198) #15	C22orf39 (ENSMMMG00000003206) #16	UFD1 (ENSMMMG00000003233) #17	CDC45 (ENSMMMG00000003340) #18	CLDN5 (ENSMMMG00000003401) #19	SEPTIN5 (ENSMMMG00000003410) #20	GP1BB (ENSMMMG00000003456) #21	TBX1 (ENSMMMG00000003469) #22	GNB1L (ENSMMMG00000003491)	RTL10 (ENSMMMG00000003536) #23	ENSMMMG00000003551	TXNRD2 (ENSMMMG00000003687) #24	COMT (ENSMMMG00000004274) #25	ENSMMMG00000004301	ARVCF (ENSMMMG00000004311) #26	ENSMMMG00000004324 #26	TANGO2 (ENSMMMG00000004334) #27	DGCR8 (ENSMMMG00000004386) #28	TRMT2A (ENSMMMG00000004427) #29	ENSMMMG00000004537	RANBP1 (ENSMMMG00000004542) #30	ZDHHC8 (ENSMMMG00000004564) #31	CCDC188 (ENSMMMG00000004585)
Eurasian red squirrel	MODERN SPECIES	17	TSSK2 (ENSSVLG00005009517) #9	ESS2 (ENSSVLG00005009535) #10	GSC2 (ENSSVLG00005009577) #11	SLC25A1 (ENSSVLG00005009628) #12	CLTCL1 (ENSSVLG00005009761) #13	ENSSVLG00005009831	HIRA (ENSSVLG00005009905) #14	MRPL40 (ENSSVLG00005010046) #15	C22orf39 (ENSSVLG00005010097) #16	ENSSVLG00005010133 #17	CDC45 (ENSSVLG00005010179) #18	CLDN5 (ENSSVLG00005007073) #19	ENSSVLG00005007086	SEPTIN5 (ENSSVLG00005007153) #20	GP1BB (ENSSVLG00005007231) #21	TBX1 (ENSSVLG00005007283) #22	GNB1L (ENSSVLG00005007359)	RTL10 (ENSSVLG00005007389) #23	TXNRD2 (ENSSVLG00005007580) #24	COMT (ENSSVLG00005008169) #25	ARVCF (ENSSVLG00005008262) #26	TANGO2 (ENSSVLG00005008385) #27	DGCR8 (ENSSVLG00005008519) #28	TRMT2A (ENSSVLG00005008593) #29	RANBP1 (ENSSVLG00005008780) #30	ZDHHC8 (ENSSVLG00005008895) #31	CCDC188 (ENSSVLG00005008983)	RTN4R (ENSSVLG00005009047) #32	ENSSVLG00005009088	ENSSVLG00005009216	ENSSVLG00005009313
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000162280	ENSGT00940000159978
Naked mole-rat female	MODERN SPECIES	15	ENSHGLG00000047108	ENSHGLG00000002228	ENSHGLG00000037724	ENSHGLG00000047283	ENSHGLG00000009422	ENSHGLG00000013734	ENSHGLG00000010841 #14	MRPL40 (ENSHGLG00000039126) #15	C22orf39 (ENSHGLG00000035091) #16	ENSHGLG00000014850 #17	CDC45 (ENSHGLG00000015159) #18	CLDN5 (ENSHGLG00000046656) #19	ENSHGLG00000015729	SEPTIN5 (ENSHGLG00000013741) #20	GP1BB (ENSHGLG00000016759) #21	TBX1 (ENSHGLG00000016334) #22	GNB1L (ENSHGLG00000016380)	TXNRD2 (ENSHGLG00000018271) #24	COMT (ENSHGLG00000008056) #25	ARVCF (ENSHGLG00000011341) #26	ENSHGLG00000017694 #27	DGCR8 (ENSHGLG00000016999) #28	ENSHGLG00000040825	RANBP1 (ENSHGLG00000006504) #30	ENSHGLG00000038269 #31	ENSHGLG00000036999 #31	CCDC188 (ENSHGLG00000041985)	ENSHGLG00000049857	ENSHGLG00000009015	ENSHGLG00000006917	ENSHGLG00000035576
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000159978	ENSGT00950000183203.d.h
Guinea pig	MODERN SPECIES	4	KLHL22 (ENSCPOG00000024005) #35	SCARF2 (ENSCPOG00000027465) #36	DGCR2 (ENSCPOG00000002706) #8	ESS2 (ENSCPOG00000004596) #10	GSC2 (ENSCPOG00000015708) #11	SLC25A1 (ENSCPOG00000001754) #12	CLTCL1 (ENSCPOG00000002261) #13	HIRA (ENSCPOG00000002264) #14	MRPL40 (ENSCPOG00000026802) #15	C22orf39 (ENSCPOG00000039279) #16	UFD1 (ENSCPOG00000002267) #17	CDC45 (ENSCPOG00000002270) #18	CLDN5 (ENSCPOG00000002274) #19	SEPTIN5 (ENSCPOG00000010483) #20	GP1BB (ENSCPOG00000021659) #21	TBX1 (ENSCPOG00000012532) #22	GNB1L (ENSCPOG00000020237)	TXNRD2 (ENSCPOG00000011013) #24	COMT (ENSCPOG00000004445) #25	ARVCF (ENSCPOG00000014606) #26	TANGO2 (ENSCPOG00000002949) #27	DGCR8 (ENSCPOG00000002952) #28	ENSCPOG00000040089	TRMT2A (ENSCPOG00000002959) #29	RANBP1 (ENSCPOG00000030388) #30	ZDHHC8 (ENSCPOG00000000580) #31	ENSCPOG00000033882	RTN4R (ENSCPOG00000020767) #32	ENSCPOG00000021534	ENSCPOG00000001902	HIC2 (ENSCPOG00000001134)
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000159978	ENSGT00950000183203.d.h
Degu	MODERN SPECIES	62	SCARF2 (ENSODEG00000016305) #36	ENSODEG00000016287	DGCR2 (ENSODEG00000016687) #8	ENSODEG00000020381	ENSODEG00000016401 #10	SLC25A1 (ENSODEG00000016493) #12	CLTCL1 (ENSODEG00000016517) #13	HIRA (ENSODEG00000016444) #14	MRPL40 (ENSODEG00000017051) #15	C22orf39 (ENSODEG00000017124) #16	ENSODEG00000016396 #17	CDC45 (ENSODEG00000016658) #18	CLDN5 (ENSODEG00000020395) #19	SEPTIN5 (ENSODEG00000016498) #20	GP1BB (ENSODEG00000016559) #21	TBX1 (ENSODEG00000016676) #22	GNB1L (ENSODEG00000016226)	TXNRD2 (ENSODEG00000016336) #24	COMT (ENSODEG00000016382) #25	ARVCF (ENSODEG00000016204) #26	TANGO2 (ENSODEG00000016106) #27	DGCR8 (ENSODEG00000016402) #28	TRMT2A (ENSODEG00000016053) #29	ENSODEG00000015935 #30	ZDHHC8 (ENSODEG00000016037) #31	ENSODEG00000015917	RTN4R (ENSODEG00000015875) #32	ENSODEG00000016154	ENSODEG00000015809	HIC2 (ENSODEG00000016054)	ENSODEG00000015829
Long-tailed chinchilla	MODERN SPECIES	149	ZNF74 (ENSCLAG00000015439) #37	ENSCLAG00000017009	DGCR2 (ENSCLAG00000014962) #8	ESS2 (ENSCLAG00000015255) #10	GSC2 (ENSCLAG00000016210) #11	SLC25A1 (ENSCLAG00000016306) #12	CLTCL1 (ENSCLAG00000016811) #13	HIRA (ENSCLAG00000015724) #14	MRPL40 (ENSCLAG00000016629) #15	C22orf39 (ENSCLAG00000016842) #16	UFD1 (ENSCLAG00000015265) #17	CDC45 (ENSCLAG00000015752) #18	CLDN5 (ENSCLAG00000018017) #19	GP1BB (ENSCLAG00000016703) #21	SEPTIN5 (ENSCLAG00000015333) #20	TBX1 (ENSCLAG00000014504) #22	ENSCLAG00000013592	TXNRD2 (ENSCLAG00000014718) #24	COMT (ENSCLAG00000013891) #25	ARVCF (ENSCLAG00000015864) #26	TANGO2 (ENSCLAG00000016523) #27	DGCR8 (ENSCLAG00000013910) #28	TRMT2A (ENSCLAG00000015094) #29	RANBP1 (ENSCLAG00000014666) #30	ZDHHC8 (ENSCLAG00000014913) #31	ENSCLAG00000014259	RTN4R (ENSCLAG00000015372) #32	ENSCLAG00000016071	ENSCLAG00000015292	MROH9 (ENSCLAG00000017068)	HIC2 (ENSCLAG00000017018)
Lagomorpha	ANCESTRAL SPECIES	196																ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00390000006265.b	ENSGT00390000017663
Pika	MODERN SPECIES	3984																ENSOPRG00000014909 #22
Rabbit	MODERN SPECIES	559																ENSOCUG00000014466 #22	GNB1L (ENSOCUG00000026037)	RTL10 (ENSOCUG00000010326) #23	ARVCF (ENSOCUG00000006299) #26	COMT (ENSOCUG00000006297) #25	TANGO2 (ENSOCUG00000021272) #27	DGCR8 (ENSOCUG00000003612) #28	ENSOCUG00000037773	TRMT2A (ENSOCUG00000021225) #29	RANBP1 (ENSOCUG00000022698) #30	ZDHHC8 (ENSOCUG00000001186) #31	CCDC188 (ENSOCUG00000033404)	ENSOCUG00000009391	ENSOCUG00000024558	ENSOCUG00000021383	ENSOCUG00000037703
Laurasiatheria	ANCESTRAL SPECIES	19	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154816.a.b #22
Common shrew	MODERN SPECIES	5946																ENSSARG00000008908 #22
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Suina	ANCESTRAL SPECIES	20	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Pig	MODERN SPECIES	5	DGCR2 (ENSSSCG00000036280) #8	TSSK1B (ENSSSCG00000058838)	TSSK2 (ENSSSCG00000010113) #9	ESS2 (ENSSSCG00000010114) #10	GSC2 (ENSSSCG00000062065) #11	SLC25A1 (ENSSSCG00000010116) #12	ENSSSCG00000010117	HIRA (ENSSSCG00000010118) #14	MRPL40 (ENSSSCG00000034014) #15	C22orf39 (ENSSSCG00000040740) #16	UFD1 (ENSSSCG00000010121) #17	CDC45 (ENSSSCG00000010122) #18	CLDN5 (ENSSSCG00000041667) #19	SEPTIN5 (ENSSSCG00000010128) #20	GP1BB (ENSSSCG00000030732) #21	TBX1 (ENSSSCG00000037762) #22	GNB1L (ENSSSCG00000010130)	TXNRD2 (ENSSSCG00000010131) #24	COMT (ENSSSCG00000010132) #25	ARVCF (ENSSSCG00000010133) #26	TANGO2 (ENSSSCG00000010134) #27	DGCR8 (ENSSSCG00000010135) #28	TRMT2A (ENSSSCG00000010136) #29	ENSSSCG00000059366	RANBP1 (ENSSSCG00000038308) #30	ZDHHC8 (ENSSSCG00000010138) #31	CCDC188 (ENSSSCG00000010139)	RTN4R (ENSSSCG00000034656) #32	ENSSSCG00000033787	ENSSSCG00000032073	CHRM3 (ENSSSCG00000026176)
Chacoan peccary	MODERN SPECIES	812	ZNF74 (ENSCWAG00000004923) #37	DGCR2 (ENSCWAG00000004856) #8	TSSK1B (ENSCWAG00000004836)	TSSK2 (ENSCWAG00000004822) #9	ESS2 (ENSCWAG00000004769) #10	GSC2 (ENSCWAG00000004751) #11	SLC25A1 (ENSCWAG00000004726) #12	HIRA (ENSCWAG00000004646) #14	MRPL40 (ENSCWAG00000004614) #15	C22orf39 (ENSCWAG00000004586) #16	UFD1 (ENSCWAG00000004536) #17	CDC45 (ENSCWAG00000004361) #18	CLDN5 (ENSCWAG00000004333) #19	SEPTIN5 (ENSCWAG00000004243) #20	GP1BB (ENSCWAG00000004211) #21	TBX1 (ENSCWAG00000004121) #22	GNB1L (ENSCWAG00000004091)	TXNRD2 (ENSCWAG00000003913) #24	COMT (ENSCWAG00000011158) #25	ARVCF (ENSCWAG00000010468) #26	TANGO2 (ENSCWAG00000010139) #27	DGCR8 (ENSCWAG00000010025) #28	ENSCWAG00000010009	TRMT2A (ENSCWAG00000009922) #29	RANBP1 (ENSCWAG00000009835) #30	ZDHHC8 (ENSCWAG00000009756) #31	CCDC188 (ENSCWAG00000009656)	RTN4R (ENSCWAG00000009631) #32
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Camelidae	ANCESTRAL SPECIES	72	ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Arabian camel	MODERN SPECIES	25	ENSCDRG00005009059 #37	ENSCDRG00005019616	DGCR2 (ENSCDRG00005019475) #8	TSSK1B (ENSCDRG00005019438)	TSSK2 (ENSCDRG00005019423) #9	ESS2 (ENSCDRG00005019401) #10	SLC25A1 (ENSCDRG00005019345) #12	HIRA (ENSCDRG00005019217) #14	MRPL40 (ENSCDRG00005019190) #15	C22orf39 (ENSCDRG00005019176) #16	UFD1 (ENSCDRG00005019126) #17	CDC45 (ENSCDRG00005019061) #18	CLDN5 (ENSCDRG00005019043) #19	SEPTIN5 (ENSCDRG00005018840) #20	GP1BB (ENSCDRG00005018787) #21	TBX1 (ENSCDRG00005018736) #22	GNB1L (ENSCDRG00005018677)	TXNRD2 (ENSCDRG00005018620) #24	COMT (ENSCDRG00005018572) #25	ARVCF (ENSCDRG00005018376) #26	TANGO2 (ENSCDRG00005018134) #27	DGCR8 (ENSCDRG00005017952) #28	ENSCDRG00005017923	TRMT2A (ENSCDRG00005017855) #29	RANBP1 (ENSCDRG00005017795) #30	ENSCDRG00005017778 #31	CCDC188 (ENSCDRG00005017731)	RTN4R (ENSCDRG00005017692) #32	ENSCDRG00005017649	ENSCDRG00005017582
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000162000.d #37	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b.f.a	ENSGT00390000017663
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000162226 #9	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b.f.a	ENSGT00390000017663
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #23	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b.f.a	ENSGT00390000017663
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b.f.a	ENSGT00390000017663	ENSGT01030000234510.a.a.b
Narwhal	MODERN SPECIES	295	ZNF74 (ENSMMNG00015003194) #37	ENSMMNG00015003178	DGCR2 (ENSMMNG00015003147) #8	TSSK1B (ENSMMNG00015003130)	TSSK2 (ENSMMNG00015003121) #9	ESS2 (ENSMMNG00015003094) #10	GSC2 (ENSMMNG00015003081) #11	ENSMMNG00015003057 #12	HIRA (ENSMMNG00015003001) #14	MRPL40 (ENSMMNG00015002968) #15	C22orf39 (ENSMMNG00015002959) #16	UFD1 (ENSMMNG00015002931) #17	CDC45 (ENSMMNG00015002864) #18	SEPTIN5 (ENSMMNG00015002817) #20	GP1BB (ENSMMNG00015002796) #21	TBX1 (ENSMMNG00015002777) #22	GNB1L (ENSMMNG00015002745)	TXNRD2 (ENSMMNG00015002636) #24	COMT (ENSMMNG00015002538) #25	ARVCF (ENSMMNG00015002461) #26	TANGO2 (ENSMMNG00015002360) #27	DGCR8 (ENSMMNG00015002248) #28	ENSMMNG00015002215	TRMT2A (ENSMMNG00015002180) #29	RANBP1 (ENSMMNG00015002143) #30	ZDHHC8 (ENSMMNG00015002094) #31	CCDC188 (ENSMMNG00015002045)	RTN4R (ENSMMNG00015002020) #32	ENSMMNG00015001992	ENSMMNG00015001943	MC2R (ENSMMNG00015001914)
Beluga whale	MODERN SPECIES	60	ZNF74 (ENSDLEG00000012291) #37	DGCR2 (ENSDLEG00000012240) #8	TSSK1B (ENSDLEG00000012230)	TSSK2 (ENSDLEG00000012209) #9	ESS2 (ENSDLEG00000012187) #10	GSC2 (ENSDLEG00000012166) #11	ENSDLEG00000012143 #12	HIRA (ENSDLEG00000011918) #14	MRPL40 (ENSDLEG00000011862) #15	C22orf39 (ENSDLEG00000020170) #16	UFD1 (ENSDLEG00000020167) #17	CDC45 (ENSDLEG00000020154) #18	CLDN5 (ENSDLEG00000020150) #19	GP1BB (ENSDLEG00000020147) #21	SEPT5 (ENSDLEG00000020145) #20	TBX1 (ENSDLEG00000020144) #22	GNB1L (ENSDLEG00000020142)	TXNRD2 (ENSDLEG00000020139) #24	COMT (ENSDLEG00000020135) #25	ARVCF (ENSDLEG00000020102) #26	TANGO2 (ENSDLEG00000020094) #27	DGCR8 (ENSDLEG00000020080) #28	TRMT2A (ENSDLEG00000020075) #29	RANBP1 (ENSDLEG00000020049) #30	ZDHHC8 (ENSDLEG00000020024) #31	RTN4R (ENSDLEG00000020018) #32	ENSDLEG00000020007	DGCR6L (ENSDLEG00000020002)	MC2R (ENSDLEG00000020000)	RNMT (ENSDLEG00000019988)	FAM210A (ENSDLEG00000019983)
Vaquita	MODERN SPECIES	5	ENSPSNG00000010041	DGCR2 (ENSPSNG00000009976) #8	TSSK1B (ENSPSNG00000009934)	TSSK2 (ENSPSNG00000009893) #9	ESS2 (ENSPSNG00000009812) #10	GSC2 (ENSPSNG00000009743) #11	SLC25A1 (ENSPSNG00000009671) #12	HIRA (ENSPSNG00000022312) #14	MRPL40 (ENSPSNG00000022307) #15	C22orf39 (ENSPSNG00000022302) #16	UFD1 (ENSPSNG00000022294) #17	CDC45 (ENSPSNG00000022278) #18	CLDN5 (ENSPSNG00000022262) #19	SEPTIN5 (ENSPSNG00000022251) #20	GP1BB (ENSPSNG00000022243) #21	TBX1 (ENSPSNG00000022232) #22	RTL10 (ENSPSNG00000022217) #23	GNB1L (ENSPSNG00000022213)	TXNRD2 (ENSPSNG00000022136) #24	COMT (ENSPSNG00000022080) #25	ARVCF (ENSPSNG00000022048) #26	TANGO2 (ENSPSNG00000021992) #27	DGCR8 (ENSPSNG00000021917) #28	TRMT2A (ENSPSNG00000021867) #29	RANBP1 (ENSPSNG00000021841) #30	ZDHHC8 (ENSPSNG00000021796) #31	RTN4R (ENSPSNG00000021732) #32	ENSPSNG00000021724	ENSPSNG00000021716	MC2R (ENSPSNG00000021708)	RNMT (ENSPSNG00000021693)
Sperm whale	MODERN SPECIES	10	ENSPCTG00005012312	SLC7A4 (ENSPCTG00005012254)	TUBA3C (ENSPCTG00005012020)	MZT2B (ENSPCTG00005011918)	SMPD4 (ENSPCTG00005011226)	ENSPCTG00005010751	MED15 (ENSPCTG00005010479) #34	KLHL22 (ENSPCTG00005010407) #35	SCARF2 (ENSPCTG00005010140) #36	ZNF74 (ENSPCTG00005010108) #37	ENSPCTG00005010005	DGCR2 (ENSPCTG00005009960) #8	HIRA (ENSPCTG00005009870) #14	CLDN5 (ENSPCTG00005009841) #19	ENSPCTG00005009699 #24	TBX1 (ENSPCTG00005009547) #22	GNB1L (ENSPCTG00005009492)	ENSPCTG00005009452	TRMT2A (ENSPCTG00005009317) #29	ENSPCTG00005009225 #30	ZDHHC8 (ENSPCTG00005009100) #31	ENSPCTG00005009045	ENSPCTG00005013482	RTN4R (ENSPCTG00005013415) #32	MC2R (ENSPCTG00005013398)	RNMT (ENSPCTG00005013342)	FAM210A (ENSPCTG00005013294)	LDLRAD4 (ENSPCTG00005013235)	CEP192 (ENSPCTG00005012272)	SEH1L (ENSPCTG00005011993)	PTPN2 (ENSPCTG00005011793)
Blue whale	MODERN SPECIES	5	ZNF74 (ENSBMSG00010016713) #37	DGCR2 (ENSBMSG00010016761) #8	TSSK1B (ENSBMSG00010016809)	TSSK2 (ENSBMSG00010016818) #9	ESS2 (ENSBMSG00010016855) #10	GSC2 (ENSBMSG00010016908) #11	SLC25A1 (ENSBMSG00010016932) #12	ENSBMSG00010017015 #14	MRPL40 (ENSBMSG00010017278) #15	ENSBMSG00010017317 #16	UFD1 (ENSBMSG00010017349) #17	CDC45 (ENSBMSG00010017411) #18	CLDN5 (ENSBMSG00010017459) #19	SEPTIN5 (ENSBMSG00010017511) #20	GP1BB (ENSBMSG00010017581) #21	TBX1 (ENSBMSG00010017617) #22	GNB1L (ENSBMSG00010017693)	TXNRD2 (ENSBMSG00010017798) #24	COMT (ENSBMSG00010018058) #25	ARVCF (ENSBMSG00010018117) #26	TANGO2 (ENSBMSG00010018220) #27	DGCR8 (ENSBMSG00010018356) #28	TRMT2A (ENSBMSG00010018395) #29	RANBP1 (ENSBMSG00010018448) #30	ZDHHC8 (ENSBMSG00010018514) #31	CCDC188 (ENSBMSG00010018579)	ENSBMSG00010018682	RTN4R (ENSBMSG00010018698) #32	ENSBMSG00010018745	ENSBMSG00010018836	MC2R (ENSBMSG00010018850)
Pecora	ANCESTRAL SPECIES	14	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Percora_a	ANCESTRAL SPECIES	17	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Siberian musk deer	MODERN SPECIES	1175	ENSMMSG00000008882	DGCR2 (ENSMMSG00000008848) #8	TSSK1B (ENSMMSG00000008833)	TSSK2 (ENSMMSG00000008823) #9	ESS2 (ENSMMSG00000008789) #10	GSC2 (ENSMMSG00000008763) #11	SLC25A1 (ENSMMSG00000008735) #12	HIRA (ENSMMSG00000008682) #14	MRPL40 (ENSMMSG00000008630) #15	C22orf39 (ENSMMSG00000008603) #16	UFD1 (ENSMMSG00000008492) #17	CDC45 (ENSMMSG00000008266) #18	CLDN5 (ENSMMSG00000008238) #19	GP1BB (ENSMMSG00000008211) #21	SEPTIN5 (ENSMMSG00000008112) #20	TBX1 (ENSMMSG00000008043) #22	GNB1L (ENSMMSG00000007985)	TXNRD2 (ENSMMSG00000007930) #24	COMT (ENSMMSG00000007908) #25	ARVCF (ENSMMSG00000007015) #26	TANGO2 (ENSMMSG00000006788) #27	DGCR8 (ENSMMSG00000006700) #28	ENSMMSG00000006680	TRMT2A (ENSMMSG00000006612) #29	RANBP1 (ENSMMSG00000006559) #30	ZDHHC8 (ENSMMSG00000006430) #31	CCDC188 (ENSMMSG00000006374)	RTN4R (ENSMMSG00000006355) #32	ENSMMSG00000006242	ENSMMSG00000006229	ENSMMSG00000006217
Bovidae	ANCESTRAL SPECIES	17	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Bovinae	ANCESTRAL SPECIES	13	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Bos	ANCESTRAL SPECIES	14	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Bos_b	ANCESTRAL SPECIES	13	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Hybrid Bos Indicus	MODERN SPECIES	8	ZNF74 (ENSBIXG00005017026) #37	DGCR2 (ENSBIXG00005017055) #8	TSSK1B (ENSBIXG00005002774)	TSSK2 (ENSBIXG00005017076) #9	ESS2 (ENSBIXG00005017113) #10	GSC2 (ENSBIXG00005017143) #11	SLC25A1 (ENSBIXG00005017171) #12	HIRA (ENSBIXG00005017294) #14	MRPL40 (ENSBIXG00005017318) #15	ENSBIXG00005017342 #16	UFD1 (ENSBIXG00005017395) #17	CDC45 (ENSBIXG00005017557) #18	CLDN5 (ENSBIXG00005002859) #19	SEPTIN5 (ENSBIXG00005017620) #20	GP1BB (ENSBIXG00005017653) #21	TBX1 (ENSBIXG00005017714) #22	GNB1L (ENSBIXG00005017779)	ENSBIXG00005017845 #24	ENSBIXG00005017867 #25	ARVCF (ENSBIXG00005002918) #26	TANGO2 (ENSBIXG00005018016) #27	DGCR8 (ENSBIXG00005002928) #28	ENSBIXG00005018056	TRMT2A (ENSBIXG00005018069) #29	RANBP1 (ENSBIXG00005018083) #30	ZDHHC8 (ENSBIXG00005005852) #31	CCDC188 (ENSBIXG00005018144)	RTN4R (ENSBIXG00005018165) #32	ENSBIXG00005018339	ENSBIXG00005018370
Cow	MODERN SPECIES	8	ZNF74 (ENSBTAG00000016257) #37	DGCR2 (ENSBTAG00000000429) #8	TSSK1B (ENSBTAG00000045955)	TSSK2 (ENSBTAG00000048123) #9	ESS2 (ENSBTAG00000018534) #10	GSC2 (ENSBTAG00000047526) #11	SLC25A1 (ENSBTAG00000008528) #12	HIRA (ENSBTAG00000019888) #14	MRPL40 (ENSBTAG00000019891) #15	ENSBTAG00000048885 #16	UFD1 (ENSBTAG00000004284) #17	CDC45 (ENSBTAG00000004286) #18	CLDN5 (ENSBTAG00000022020) #19	SEPTIN5 (ENSBTAG00000008320) #20	GP1BB (ENSBTAG00000039059) #21	TBX1 (ENSBTAG00000048862) #22	GNB1L (ENSBTAG00000021052)	TXNRD2 (ENSBTAG00000043581) #24	COMT (ENSBTAG00000019516) #25	ARVCF (ENSBTAG00000001473) #26	TANGO2 (ENSBTAG00000012421) #27	DGCR8 (ENSBTAG00000019869) #28	TRMT2A (ENSBTAG00000019871) #29	ENSBTAG00000049062	RANBP1 (ENSBTAG00000006656) #30	ZDHHC8 (ENSBTAG00000006657) #31	CCDC188 (ENSBTAG00000047626)	RTN4R (ENSBTAG00000046677) #32	PRODH (ENSBTAG00000047676)	DGCR6L (ENSBTAG00000047299)	ENSBTAG00000050485
Bos_a	ANCESTRAL SPECIES	56	ENSGT00940000162000.d #37	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Domestic yak	MODERN SPECIES	7	SCARF2 (ENSBGRG00000018607) #36	ZNF74 (ENSBGRG00000018898) #37	DGCR2 (ENSBGRG00000018919) #8	TSSK1B (ENSBGRG00000019032)	ENSBGRG00000019056 #10	GSC2 (ENSBGRG00000019298) #11	SLC25A1 (ENSBGRG00000019365) #12	HIRA (ENSBGRG00000019430) #14	MRPL40 (ENSBGRG00000019620) #15	ENSBGRG00000019661 #16	UFD1 (ENSBGRG00000019757) #17	CDC45 (ENSBGRG00000020248) #18	CLDN5 (ENSBGRG00000020524) #19	SEPTIN5 (ENSBGRG00000020562) #20	GP1BB (ENSBGRG00000020762) #21	TBX1 (ENSBGRG00000020801) #22	GNB1L (ENSBGRG00000020901)	TXNRD2 (ENSBGRG00000021002) #24	COMT (ENSBGRG00000021775) #25	ARVCF (ENSBGRG00000021889) #26	ENSBGRG00000022547 #27	DGCR8 (ENSBGRG00000022686) #28	TRMT2A (ENSBGRG00000022963) #29	ZDHHC8 (ENSBGRG00000023060) #31	CCDC188 (ENSBGRG00000023173)	RTN4R (ENSBGRG00000023275) #32	ENSBGRG00000023329	ENSBGRG00000023569
American bison	MODERN SPECIES	1658																ENSBBBG00000000854 #22
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	21	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Chiroptera	ANCESTRAL SPECIES	74	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Megabat	MODERN SPECIES	2772														SEPTIN5 (ENSPVAG00000012974) #20	GP1BB (ENSPVAG00000012978) #21	TBX1 (ENSPVAG00000012980) #22	GNB1L (ENSPVAG00000012982)	TXNRD2 (ENSPVAG00000012986) #24
Microchiroptera	ANCESTRAL SPECIES	9	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01010000222320.a.a.a.a.a	ENSGT01010000222320.a.b.b
Greater horseshoe bat	MODERN SPECIES	17	DGCR2 (ENSRFEG00010020348) #8	TSSK1B (ENSRFEG00010020420)	TSSK2 (ENSRFEG00010020429) #9	ESS2 (ENSRFEG00010020441) #10	GSC2 (ENSRFEG00010020469) #11	SLC25A1 (ENSRFEG00010020494) #12	CLTCL1 (ENSRFEG00010020555) #13	HIRA (ENSRFEG00010020801) #14	MRPL40 (ENSRFEG00010021001) #15	C22orf39 (ENSRFEG00010021008) #16	UFD1 (ENSRFEG00010021022) #17	CDC45 (ENSRFEG00010021045) #18	CLDN5 (ENSRFEG00010021064) #19	SEPTIN5 (ENSRFEG00010021082) #20	GP1BB (ENSRFEG00010021138) #21	TBX1 (ENSRFEG00010021166) #22	GNB1L (ENSRFEG00010021187)	TXNRD2 (ENSRFEG00010021251) #24	COMT (ENSRFEG00010021372) #25	ARVCF (ENSRFEG00010021395) #26	TANGO2 (ENSRFEG00010021444) #27	DGCR8 (ENSRFEG00010021501) #28	TRMT2A (ENSRFEG00010021528) #29	RANBP1 (ENSRFEG00010021579) #30	ZDHHC8 (ENSRFEG00010021616) #31	CCDC188 (ENSRFEG00010006176)	RTN4R (ENSRFEG00010006249) #32	ENSRFEG00010006364	ENSRFEG00010006433	ENSRFEG00010006494	ENSRFEG00010006511
Equus	ANCESTRAL SPECIES	67	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b.k #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Donkey	MODERN SPECIES	28	ENSEASG00005006148	ENSEASG00005006142 #8	ENSEASG00005030907	TSSK2 (ENSEASG00005006134) #9	ESS2 (ENSEASG00005006119) #10	GSC2 (ENSEASG00005006115) #11	SLC25A1 (ENSEASG00005006114) #12	HIRA (ENSEASG00005010492) #14	ENSEASG00005027851 #15	C22orf39 (ENSEASG00005010494) #16	UFD1 (ENSEASG00005010495) #17	CDC45 (ENSEASG00005010496) #18	CLDN5 (ENSEASG00005031236) #19	SEPTIN5 (ENSEASG00005010502) #20	GP1BB (ENSEASG00005010503) #21	TBX1 (ENSEASG00005010505) #22	GNB1L (ENSEASG00005010507)	TXNRD2 (ENSEASG00005010510) #24	ENSEASG00005035506 #25	ENSEASG00005010514 #25	ARVCF (ENSEASG00005010516) #26	TANGO2 (ENSEASG00005010518) #27	DGCR8 (ENSEASG00005010521) #28	TRMT2A (ENSEASG00005010524) #29	RANBP1 (ENSEASG00005010526) #30	ZDHHC8 (ENSEASG00005010529) #31	CCDC188 (ENSEASG00005028385)	RTN4R (ENSEASG00005010530) #32	ENSEASG00005010531	ENSEASG00005037006	ENSEASG00005025688
Horse	MODERN SPECIES	29	CA15 (ENSECAG00000039414)	DGCR2 (ENSECAG00000014063) #8	ESS2 (ENSECAG00000014664) #10	GSC2 (ENSECAG00000029926) #11	ENSECAG00000021409 #12	CLTCL1 (ENSECAG00000033498) #13	ENSECAG00000051965	ENSECAG00000056680	ENSECAG00000045279	MRPL40 (ENSECAG00000009876) #15	HIRA (ENSECAG00000000286) #14	UFD1 (ENSECAG00000011062) #17	CDC45 (ENSECAG00000011788) #18	CLDN5 (ENSECAG00000047513) #19	SEPTIN5 (ENSECAG00000020718) #20	TBX1 (ENSECAG00000035745) #22	GNB1L (ENSECAG00000026940)	TXNRD2 (ENSECAG00000026879) #24	ENSECAG00000005359 #25	ARVCF (ENSECAG00000026951) #26	TANGO2 (ENSECAG00000008697) #27	ENSECAG00000045428	DGCR8 (ENSECAG00000009295) #28	TRMT2A (ENSECAG00000012384) #29	RANBP1 (ENSECAG00000017197) #30	ZDHHC8 (ENSECAG00000000562) #31	CCDC188 (ENSECAG00000030675)	RTN4R (ENSECAG00000004778) #32	ENSECAG00000038666	ENSECAG00000026825
Carnivora	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b
Felidae	ANCESTRAL SPECIES	20	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00950000183200.A.a.b.b.d.a	ENSGT00940000156871
Cat	MODERN SPECIES	243	CA15 (ENSFCAG00000048855)	DGCR2 (ENSFCAG00000009527) #8	TSSK1B (ENSFCAG00000023621)	TSSK2 (ENSFCAG00000009531) #9	ESS2 (ENSFCAG00000029613) #10	GSC2 (ENSFCAG00000042776) #11	SLC25A1 (ENSFCAG00000009533) #12	CLTCL1 (ENSFCAG00000002747) #13	MRPL40 (ENSFCAG00000002752) #15	HIRA (ENSFCAG00000002750) #14	UFD1 (ENSFCAG00000004294) #17	CDC45 (ENSFCAG00000004297) #18	CLDN5 (ENSFCAG00000029093) #19	SEPTIN5 (ENSFCAG00000035936) #20	GP1BB (ENSFCAG00000032253) #21	TBX1 (ENSFCAG00000005446) #22	GNB1L (ENSFCAG00000018235)	TXNRD2 (ENSFCAG00000002682) #24	COMT (ENSFCAG00000002684) #25	ARVCF (ENSFCAG00000002686) #26	TANGO2 (ENSFCAG00000002688) #27	DGCR8 (ENSFCAG00000006801) #28	TRMT2A (ENSFCAG00000004170) #29	RANBP1 (ENSFCAG00000004171) #30	ZDHHC8 (ENSFCAG00000004172) #31	CCDC188 (ENSFCAG00000029025)	RTN4R (ENSFCAG00000032911) #32	ENSFCAG00000023783	ENSFCAG00000028790	ENSFCAG00000052978	ENSFCAG00000006400
Panthera	ANCESTRAL SPECIES	35	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00950000183200.A.a.b.b.d.a	ENSGT00940000153474.a.b.a.b.b
Panthera_a	ANCESTRAL SPECIES	62	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00950000183200.A.a.b.b.d.a
lion	MODERN SPECIES	12	TSSK1B (ENSPLOG00000016648)	TSSK2 (ENSPLOG00000016661) #9	ESS2 (ENSPLOG00000016681) #10	GSC2 (ENSPLOG00000016795) #11	ENSPLOG00000016834	SLC25A1 (ENSPLOG00000016874) #12	CLTCL1 (ENSPLOG00000016947) #13	HIRA (ENSPLOG00000017572) #14	MRPL40 (ENSPLOG00000018056) #15	C22orf39 (ENSPLOG00000018074) #16	UFD1 (ENSPLOG00000018116) #17	CDC45 (ENSPLOG00000018278) #18	CLDN5 (ENSPLOG00000018318) #19	SEPTIN5 (ENSPLOG00000018341) #20	GP1BB (ENSPLOG00000018495) #21	TBX1 (ENSPLOG00000018535) #22	GNB1L (ENSPLOG00000018672)	TXNRD2 (ENSPLOG00000018769) #24	COMT (ENSPLOG00000019271) #25	ARVCF (ENSPLOG00000019377) #26	TANGO2 (ENSPLOG00000019874) #27	DGCR8 (ENSPLOG00000019913) #28	TRMT2A (ENSPLOG00000019989) #29	RANBP1 (ENSPLOG00000020134) #30	ZDHHC8 (ENSPLOG00000020202) #31	CCDC188 (ENSPLOG00000020243)	RTN4R (ENSPLOG00000020294) #32	ENSPLOG00000020330	ENSPLOG00000020418	ENSPLOG00000020443	IGLV5-52 (ENSPLOG00000020540)
leopard	MODERN SPECIES	178	ZNF74 (ENSPPRG00000008009) #37	ENSPPRG00000007469	DGCR2 (ENSPPRG00000007393) #8	ESS2 (ENSPPRG00000006405) #10	GSC2 (ENSPPRG00000006381) #11	SLC25A1 (ENSPPRG00000006372) #12	CLTCL1 (ENSPPRG00000006295) #13	HIRA (ENSPPRG00000005445) #14	MRPL40 (ENSPPRG00000004672) #15	C22orf39 (ENSPPRG00000004565) #16	UFD1 (ENSPPRG00000004497) #17	CDC45 (ENSPPRG00000004159) #18	CLDN5 (ENSPPRG00000022046) #19	SEPTIN5 (ENSPPRG00000002930) #20	GP1BB (ENSPPRG00000002736) #21	TBX1 (ENSPPRG00000002705) #22	GNB1L (ENSPPRG00000002627)	TXNRD2 (ENSPPRG00000000978) #24	COMT (ENSPPRG00000023206) #25	ARVCF (ENSPPRG00000023371) #26	TANGO2 (ENSPPRG00000022392) #27	DGCR8 (ENSPPRG00000018958) #28	TRMT2A (ENSPPRG00000016789) #29	RANBP1 (ENSPPRG00000015479) #30	ZDHHC8 (ENSPPRG00000014676) #31	CCDC188 (ENSPPRG00000013446)	RTN4R (ENSPPRG00000013418) #32	ENSPPRG00000013092	ENSPPRG00000011401	PIWIL3 (ENSPPRG00000011117)
Tiger	MODERN SPECIES	355																ENSPTIG00000015403 #22	GNB1L (ENSPTIG00000015570)	TXNRD2 (ENSPTIG00000017883) #24	COMT (ENSPTIG00000021113) #25	ARVCF (ENSPTIG00000021324) #26	TANGO2 (ENSPTIG00000007111) #27	DGCR8 (ENSPTIG00000010980) #28	TRMT2A (ENSPTIG00000014523) #29	RANBP1 (ENSPTIG00000016192) #30	CCDC188 (ENSPTIG00000019384)	RTN4R (ENSPTIG00000019691) #32	ENSPTIG00000019761	ENSPTIG00000008722	PIWIL3 (ENSPTIG00000009971)
Caniformia	ANCESTRAL SPECIES	9	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b
Canidae	ANCESTRAL SPECIES	55	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
Red fox	MODERN SPECIES	174	ENSVVUG00000023757	DGCR2 (ENSVVUG00000023768) #8	TSSK1B (ENSVVUG00000023781)	TSSK2 (ENSVVUG00000023783) #9	ESS2 (ENSVVUG00000023785) #10	SLC25A1 (ENSVVUG00000023788) #12	CLTCL1 (ENSVVUG00000023881) #13	HIRA (ENSVVUG00000025357) #14	MRPL40 (ENSVVUG00000025360) #15	CUNH22orf39 (ENSVVUG00000025361) #16	UFD1 (ENSVVUG00000025364) #17	CDC45 (ENSVVUG00000025367) #18	CLDN5 (ENSVVUG00000025372) #19	SEPTIN5 (ENSVVUG00000025380) #20	ENSVVUG00000025383 #21	ENSVVUG00000025387 #22	GNB1L (ENSVVUG00000025391)	TXNRD2 (ENSVVUG00000025396) #24	COMT (ENSVVUG00000025402) #25	ARVCF (ENSVVUG00000025405) #26	TANGO2 (ENSVVUG00000025407) #27	DGCR8 (ENSVVUG00000025413) #28	TRMT2A (ENSVVUG00000025420) #29	RANBP1 (ENSVVUG00000025421) #30	ZDHHC8 (ENSVVUG00000025423) #31	CCDC188 (ENSVVUG00000025424)	RTN4R (ENSVVUG00000025427) #32	ENSVVUG00000025430	ENSVVUG00000025464	ENSVVUG00000025466
Canis_lupus	ANCESTRAL SPECIES	43	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000166811 #23	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234531.A.a.eb
Dingo	MODERN SPECIES	108	DGCR2 (ENSCAFG00020010588) #8	TSSK1B (ENSCAFG00020010585)	TSSK2 (ENSCAFG00020010581) #9	ESS2 (ENSCAFG00020010579) #10	GSC2 (ENSCAFG00020010577) #11	SLC25A1 (ENSCAFG00020010571) #12	CLTCL1 (ENSCAFG00020008131) #13	HIRA (ENSCAFG00020007998) #14	MRPL40 (ENSCAFG00020007995) #15	C22orf39 (ENSCAFG00020007992) #16	UFD1 (ENSCAFG00020007988) #17	CDC45 (ENSCAFG00020007915) #18	CLDN5 (ENSCAFG00020007906) #19	SEPTIN5 (ENSCAFG00020007897) #20	GP1BB (ENSCAFG00020007895) #21	TBX1 (ENSCAFG00020007879) #22	GNB1L (ENSCAFG00020007876)	TXNRD2 (ENSCAFG00020007857) #24	COMT (ENSCAFG00020007849) #25	ARVCF (ENSCAFG00020007804) #26	TANGO2 (ENSCAFG00020007792) #27	DGCR8 (ENSCAFG00020007769) #28	TRMT2A (ENSCAFG00020007738) #29	RANBP1 (ENSCAFG00020007723) #30	ZDHHC8 (ENSCAFG00020007710) #31	ENSCAFG00020007701	RTN4R (ENSCAFG00020007696) #32	ENSCAFG00020007638	ENSCAFG00020007629	ENSCAFG00020007599	VPREB1 (ENSCAFG00020007589)
Dog	MODERN SPECIES	18	ENSCAFG00845030201	TSSK1B (ENSCAFG00845030188)	ENSCAFG00845030168 #8	TSSK2 (ENSCAFG00845030135) #9	ESS2 (ENSCAFG00845030127) #10	GSC2 (ENSCAFG00845030114) #11	SLC25A1 (ENSCAFG00845030106) #12	CLTCL1 (ENSCAFG00845030003) #13	HIRA (ENSCAFG00845029669) #14	ENSCAFG00845029562 #15	C26H22orf39 (ENSCAFG00845029541) #16	UFD1 (ENSCAFG00845029515) #17	CDC45 (ENSCAFG00845029448) #18	CLDN5 (ENSCAFG00845029410) #19	SEPTIN5 (ENSCAFG00845029335) #20	ENSCAFG00845029160 #22	GNB1L (ENSCAFG00845029046)	ENSCAFG00845028996 #23	TXNRD2 (ENSCAFG00845028764) #24	COMT (ENSCAFG00845028665) #25	ARVCF (ENSCAFG00845028288) #26	TANGO2 (ENSCAFG00845028132) #27	DGCR8 (ENSCAFG00845027785) #28	TRMT2A (ENSCAFG00845027597) #29	ENSCAFG00845027449	ZDHHC8 (ENSCAFG00845027068) #31	CCDC188 (ENSCAFG00845026820)	RTN4R (ENSCAFG00845026751) #32	ENSCAFG00845026581	ENSCAFG00845026452	ENSCAFG00845026346
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
American mink	MODERN SPECIES	186	DGCR2 (ENSNVIG00000022368) #8	ENSNVIG00000022387	ENSNVIG00000022390 #9	ESS2 (ENSNVIG00000022393) #10	GSC2 (ENSNVIG00000022406) #11	SLC25A1 (ENSNVIG00000022410) #12	CLTCL1 (ENSNVIG00000022420) #13	HIRA (ENSNVIG00000022490) #14	MRPL40 (ENSNVIG00000022531) #15	C22orf39 (ENSNVIG00000022538) #16	UFD1 (ENSNVIG00000022540) #17	CDC45 (ENSNVIG00000022560) #18	CLDN5 (ENSNVIG00000022587) #19	SEPTIN5 (ENSNVIG00000022591) #20	GP1BB (ENSNVIG00000022601) #21	TBX1 (ENSNVIG00000022605) #22	GNB1L (ENSNVIG00000022615)	TXNRD2 (ENSNVIG00000022635) #24	COMT (ENSNVIG00000022688) #25	ARVCF (ENSNVIG00000022696) #26	TANGO2 (ENSNVIG00000022715) #27	DGCR8 (ENSNVIG00000022717) #28	TRMT2A (ENSNVIG00000022735) #29	RANG (ENSNVIG00000022738) #30	ZDHHC8 (ENSNVIG00000022747) #31	CCDC188 (ENSNVIG00000022757)	RTN4R (ENSNVIG00000022759) #32	ENSNVIG00000022764	DGCR6 (ENSNVIG00000022780)
Ferret	MODERN SPECIES	170	ENSMPUG00000003743 #37	ENSMPUG00000003747	DGCR2 (ENSMPUG00000003800) #8	TSSK1B (ENSMPUG00000019875)	TSSK2 (ENSMPUG00000019876) #9	ESS2 (ENSMPUG00000003809) #10	SLC25A1 (ENSMPUG00000003820) #12	CLTCL1 (ENSMPUG00000003829) #13	HIRA (ENSMPUG00000003849) #14	MRPL40 (ENSMPUG00000003865) #15	UFD1 (ENSMPUG00000003872) #17	CDC45 (ENSMPUG00000003884) #18	CLDN5 (ENSMPUG00000019877) #19	SEPTIN5 (ENSMPUG00000003893) #20	GP1BB (ENSMPUG00000019878) #21	ENSMPUG00000003900 #22	GNB1L (ENSMPUG00000003907)	TXNRD2 (ENSMPUG00000003930) #24	COMT (ENSMPUG00000003944) #25	ARVCF (ENSMPUG00000003983) #26	TANGO2 (ENSMPUG00000003998) #27	DGCR8 (ENSMPUG00000004005) #28	TRMT2A (ENSMPUG00000004015) #29	ENSMPUG00000004127 #30	ZDHHC8 (ENSMPUG00000004176) #31	ENSMPUG00000004263	RTN4R (ENSMPUG00000004270) #32	ENSMPUG00000004273	ENSMPUG00000004280	MC2R (ENSMPUG00000019879)	MC5R (ENSMPUG00000019880)
Ursidae	ANCESTRAL SPECIES	23	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00410000026913	ENSGT00390000009387 #10	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Ursus	ANCESTRAL SPECIES	144	ENSGT00950000182890.D.c.b.a.a.b.a.a	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663
American black bear	MODERN SPECIES	270														SEPTIN5 (ENSUAMG00000011220) #20	GP1BB (ENSUAMG00000011218) #21	TBX1 (ENSUAMG00000011214) #22	GNB1L (ENSUAMG00000011210)	ENSUAMG00000010940 #24	ENSUAMG00000010906 #24	COMT (ENSUAMG00000010900) #25	ARVCF (ENSUAMG00000010874) #26	TANGO2 (ENSUAMG00000010859) #27	DGCR8 (ENSUAMG00000010847) #28	TRMT2A (ENSUAMG00000010839) #29	RANBP1 (ENSUAMG00000010799) #30	ZDHHC8 (ENSUAMG00000010791) #31	CCDC188 (ENSUAMG00000010789)	RTN4R (ENSUAMG00000010787) #32	ENSUAMG00000010784	ENSUAMG00000010782
Giant Panda	MODERN SPECIES	5	ENSAMEG00000011203	ENSAMEG00000011211 #8	ENSAMEG00000028481	TSSK2 (ENSAMEG00000019541) #9	ENSAMEG00000011246	ESS2 (ENSAMEG00000011256) #10	SLC25A1 (ENSAMEG00000011279) #12	CLTCL1 (ENSAMEG00000011289) #13	MRPL40 (ENSAMEG00000011421) #15	HIRA (ENSAMEG00000011366) #14	UFD1 (ENSAMEG00000011428) #17	CDC45 (ENSAMEG00000011443) #18	CLDN5 (ENSAMEG00000019567) #19	SEPTIN5 (ENSAMEG00000011509) #20	GP1BB (ENSAMEG00000025487) #21	ENSAMEG00000011544 #22	ENSAMEG00000011548	COMT (ENSAMEG00000011617) #25	ARVCF (ENSAMEG00000011628) #26	ENSAMEG00000011701 #27	DGCR8 (ENSAMEG00000011732) #28	TRMT2A (ENSAMEG00000011760) #29	RANBP1 (ENSAMEG00000011790) #30	ZDHHC8 (ENSAMEG00000011800) #31	CCDC188 (ENSAMEG00000025773)	ENSAMEG00000011833 #32	ENSAMEG00000000120	ENSAMEG00000018799	ENSAMEG00000029047	ENSAMEG00000002380	ENSAMEG00000031152
Atlantogenata	ANCESTRAL SPECIES	77	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000161017	ENSGT01030000234531.A.a
Afrotheria	ANCESTRAL SPECIES	107									ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000161017	ENSGT01030000234531.A.a	ENSGT00940000156516
Afrotheria_a	ANCESTRAL SPECIES	109									ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT00390000017663	ENSGT00940000161017	ENSGT01030000234531.A.a	ENSGT00940000156516
Elephant	MODERN SPECIES	517	ENSLAFG00000027204	MYO18B (ENSLAFG00000017436)	GRK3 (ENSLAFG00000014476)	CRYBB2 (ENSLAFG00000006843)	CRYBB3 (ENSLAFG00000006837)	ENSLAFG00000006832	LHFPL7 (ENSLAFG00000021920)	SGSM1 (ENSLAFG00000015725)	HIRA (ENSLAFG00000011054) #14	MRPL40 (ENSLAFG00000011061) #15	C22orf39 (ENSLAFG00000011063) #16	UFD1 (ENSLAFG00000011066) #17	CDC45 (ENSLAFG00000011072) #18	CLDN5 (ENSLAFG00000011077) #19	SEPTIN5 (ENSLAFG00000028004) #20	TBX1 (ENSLAFG00000021555) #22	GNB1L (ENSLAFG00000020732)	TXNRD2 (ENSLAFG00000002408) #24	COMT (ENSLAFG00000028535) #25	ARVCF (ENSLAFG00000013570) #26	TANGO2 (ENSLAFG00000000319) #27	DGCR8 (ENSLAFG00000013724) #28	TRMT2A (ENSLAFG00000022939) #29	RANBP1 (ENSLAFG00000005862) #30	ZDHHC8 (ENSLAFG00000001671) #31	RTN4R (ENSLAFG00000027673) #32	ENSLAFG00000006399	ENSLAFG00000006396	ENSLAFG00000030923
Hyrax	MODERN SPECIES	11140																TBX1 (ENSPCAG00000010176) #22
Xenarthra	ANCESTRAL SPECIES	980																ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26
Armadillo	MODERN SPECIES	4318																TBX1 (ENSDNOG00000035422) #22	GNB1L (ENSDNOG00000024523)	TXNRD2 (ENSDNOG00000039033) #24	COMT (ENSDNOG00000007084) #25	ARVCF (ENSDNOG00000007092) #26
Marsupialia	ANCESTRAL SPECIES	16	ENSGT00410000026913	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b
Opossum	MODERN SPECIES	364																TBX1 (ENSMODG00000039978) #22	GNB1L (ENSMODG00000039502)
Marsupialia_b	ANCESTRAL SPECIES	17	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733.g #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT01100000263932	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00940000153380.D	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT01020000230351.F
Diprotodontia	ANCESTRAL SPECIES	22	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000162536 #11	ENSGT00940000169366	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733.g #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT01020000230351.F	ENSGT00940000154297.B
Diprotodontia_a	ANCESTRAL SPECIES	22	ENSGT00940000163130	ENSGT00940000162226 #9	ENSGT00390000009387 #10	ENSGT00940000169366	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733.g #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.a.b.b	ENSGT00940000160711 #32	ENSGT00390000006265.b	ENSGT01020000230351.F
Common wonbat	MODERN SPECIES	910	DGCR2 (ENSVURG00010015555) #8	TSSK1B (ENSVURG00010015545)	TSSK2 (ENSVURG00010015542) #9	ESS2 (ENSVURG00010015537) #10	ENSVURG00010015531	SLC25A1 (ENSVURG00010015522) #12	CLTCL1 (ENSVURG00010015450) #13	HIRA (ENSVURG00010015408) #14	ENSVURG00010015399	MRPL40 (ENSVURG00010015389) #15	ENSVURG00010015383	UFD1 (ENSVURG00010015367) #17	CDC45 (ENSVURG00010015347) #18	ENSVURG00010015332	SEPTIN5 (ENSVURG00010015310) #20	TBX1 (ENSVURG00010015193) #22	GNB1L (ENSVURG00010015163)	TXNRD2 (ENSVURG00010015133) #24	ENSVURG00010015112	COMT (ENSVURG00010015104) #25	ARVCF (ENSVURG00010014746) #26	TANGO2 (ENSVURG00010014670) #27	ENSVURG00010014659	DGCR8 (ENSVURG00010014514) #28	ENSVURG00010014490	TRMT2A (ENSVURG00010014478) #29	RANBP1 (ENSVURG00010014464) #30	ZDHHC8 (ENSVURG00010014441) #31	ENSVURG00010014425
koala	MODERN SPECIES	64	TSSK2 (ENSPCIG00000001978) #9	ENSPCIG00000001953 #10	ENSPCIG00000001906	ENSPCIG00000001881	SLC25A1 (ENSPCIG00000025458) #12	CLTCL1 (ENSPCIG00000025462) #13	HIRA (ENSPCIG00000025474) #14	MRPL40 (ENSPCIG00000025479) #15	C22orf39 (ENSPCIG00000025482) #16	UFD1 (ENSPCIG00000025484) #17	CDC45 (ENSPCIG00000031353) #18	ENSPCIG00000033257 #19	ENSPCIG00000025491	SEPTIN5 (ENSPCIG00000035677) #20	GP1BB (ENSPCIG00000036048) #21	TBX1 (ENSPCIG00000025495) #22	GNB1L (ENSPCIG00000025496)	TXNRD2 (ENSPCIG00000025501) #24	ENSPCIG00000002881 #25	ARVCF (ENSPCIG00000002119) #26	TANGO2 (ENSPCIG00000013730) #27	ENSPCIG00000013727	DGCR8 (ENSPCIG00000027728) #28	TRMT2A (ENSPCIG00000027719) #29	ENSPCIG00000027726	RANBP1 (ENSPCIG00000027715) #30	ZDHHC8 (ENSPCIG00000027712) #31	ENSPCIG00000027710	ENSPCIG00000036969	ENSPCIG00000033718	ENSPCIG00000005425
Wallaby	MODERN SPECIES	14544																TBX1 (ENSMEUG00000011624) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000007823	TSSK2 (ENSSHAG00000007923) #9	ENSSHAG00000008002 #10	ENSSHAG00000008223 #11	SLC25A1 (ENSSHAG00000030886) #12	CLTCL1 (ENSSHAG00000008777) #13	ENSSHAG00000009464 #14	ENSSHAG00000010239 #15	ENSSHAG00000021521 #16	UFD1 (ENSSHAG00000010299) #17	CDC45 (ENSSHAG00000010439) #18	CLDN5 (ENSSHAG00000023048) #19	ENSSHAG00000011013	ENSSHAG00000027754 #20	GP1BB (ENSSHAG00000028367) #21	ENSSHAG00000005016 #22	GNB1L (ENSSHAG00000014663)	ENSSHAG00000001833 #24	COMT (ENSSHAG00000030258) #25	ARVCF (ENSSHAG00000030473) #26	ENSSHAG00000023797 #27	ENSSHAG00000008680 #27	DGCR8 (ENSSHAG00000002274) #28	TRMT2A (ENSSHAG00000027993) #29	ENSSHAG00000029402	ENSSHAG00000023384 #30	ENSSHAG00000024528 #31	ENSSHAG00000027819	ENSSHAG00000026639	ENSSHAG00000004125	ENSSHAG00000020606
Platypus	MODERN SPECIES	13	ZDHHC8 (ENSOANG00000045746) #31	RANBP1 (ENSOANG00000014576) #30	ENSOANG00000043817	TRMT2A (ENSOANG00000041446) #29	DGCR8 (ENSOANG00000037809) #28	YPEL1 (ENSOANG00000029892)	PPIL2 (ENSOANG00000047102)	HIRA (ENSOANG00000040308) #14	ENSOANG00000039468 #15	C22orf39 (ENSOANG00000046898) #16	UFD1 (ENSOANG00000045527) #17	CDC45 (ENSOANG00000020977) #18	ENSOANG00000044402 #21	SEPTIN5 (ENSOANG00000008487) #20	CLDN5 (ENSOANG00000003574) #19	TBX1 (ENSOANG00000020824) #22	GNB1L (ENSOANG00000013233)	TXNRD2 (ENSOANG00000043007) #24	COMT (ENSOANG00000041289) #25	ARVCF (ENSOANG00000038057) #26	TANGO2 (ENSOANG00000038459) #27	MAPK1 (ENSOANG00000037598)	ENSOANG00000039399	TOP3B (ENSOANG00000045186)	SDF2L1 (ENSOANG00000044827)	YDJC (ENSOANG00000043530)	ENSOANG00000008005	SERPIND1 (ENSOANG00000045569)	PI4KA (ENSOANG00000040206)	SNAP29 (ENSOANG00000049507)	ENSOANG00000043472
Sauria	ANCESTRAL SPECIES	11	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Lepidosauria	ANCESTRAL SPECIES	13	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Episquamata	ANCESTRAL SPECIES	10	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Laterata	ANCESTRAL SPECIES	12	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000019300	PPM1F (ENSPMRG00000019302)	MAPK1 (ENSPMRG00000019310)	YPEL1 (ENSPMRG00000019318)	PPIL2 (ENSPMRG00000019332)	ENSPMRG00000019369	HIRA (ENSPMRG00000015491) #14	MRPL40 (ENSPMRG00000015594) #15	C22orf39 (ENSPMRG00000015600) #16	UFD1 (ENSPMRG00000015607) #17	CDC45 (ENSPMRG00000015632) #18	CLDN5 (ENSPMRG00000015756) #19	ENSPMRG00000015777	SEPTIN5 (ENSPMRG00000015832) #20	GP1BB (ENSPMRG00000015868) #21	TBX1 (ENSPMRG00000015885) #22	GNB1L (ENSPMRG00000015903)	ENSPMRG00000015913	TXNRD2 (ENSPMRG00000015916) #24	COMT (ENSPMRG00000015933) #25	ARVCF (ENSPMRG00000015986) #26	ENSPMRG00000016121	ENSPMRG00000016129	TANGO2 (ENSPMRG00000016139) #27	ENSPMRG00000016150	DGCR8 (ENSPMRG00000016155) #28	TRMT2A (ENSPMRG00000016210) #29	ENSPMRG00000016444	ZDHHC8 (ENSPMRG00000016456) #31	PGAM5 (ENSPMRG00000016473)	ANKLE2 (ENSPMRG00000016482)
Argentine black and white tegu	MODERN SPECIES	41	SDF2L1 (ENSSMRG00000009648)	TOP3B (ENSSMRG00000009641)	PPM1F (ENSSMRG00000009640)	MAPK1 (ENSSMRG00000009639)	C22orf39 (ENSSMRG00000009637) #16	MRPL40 (ENSSMRG00000009636) #15	HIRA (ENSSMRG00000009632) #14	PPIL2 (ENSSMRG00000009626)	YPEL1 (ENSSMRG00000009624)	UFD1 (ENSSMRG00000009622) #17	CDC45 (ENSSMRG00000009620) #18	CLDN5 (ENSSMRG00000009618) #19	ENSSMRG00000009616	SEPTIN5 (ENSSMRG00000009610) #20	GP1BB (ENSSMRG00000009606) #21	TBX1 (ENSSMRG00000009598) #22	GNB1L (ENSSMRG00000009589)	TXNRD2 (ENSSMRG00000008858) #24	COMT (ENSSMRG00000008856) #25	ARVCF (ENSSMRG00000008853) #26	TANGO2 (ENSSMRG00000008824) #27	DGCR8 (ENSSMRG00000008821) #28	ENSSMRG00000008820	TRMT2A (ENSSMRG00000008517) #29	RANBP1 (ENSSMRG00000008510) #30	ZDHHC8 (ENSSMRG00000008504) #31	PGAM5 (ENSSMRG00000008501)	ANKLE2 (ENSSMRG00000008494)	GOLGA3 (ENSSMRG00000008456)	CHFR (ENSSMRG00000008442)	FBRSL1 (ENSSMRG00000008432)
Toxicofera	ANCESTRAL SPECIES	11	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Elapidae	ANCESTRAL SPECIES	31	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.a	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.a	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Elapidae_a	ANCESTRAL SPECIES	79	ENSGT00940000160018	ENSGT00940000156516.d	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.b	ENSGT00390000018606.a	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733.i.b #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Blue-lipped sea krait	MODERN SPECIES	2880																TBX1 (ENSLLTG00000017144) #22
Acanthophiinae	ANCESTRAL SPECIES	75	ENSGT00940000160018	ENSGT00940000156516.d	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919.g #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.b	ENSGT00390000018606.a	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733.i.b #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Mainland tiger snake	MODERN SPECIES	290			MAPK1 (ENSNSUG00000009516)	YPEL1 (ENSNSUG00000009517)	PPIL2 (ENSNSUG00000009518)	HIRA (ENSNSUG00000009519) #14	MRPL40 (ENSNSUG00000009707) #15	C22orf39 (ENSNSUG00000009708) #16	UFD1 (ENSNSUG00000009709) #17	CDC45 (ENSNSUG00000009710) #18	CLDN5 (ENSNSUG00000009711) #19	ENSNSUG00000009713	ENSNSUG00000009714	SEPTIN5 (ENSNSUG00000009716) #20	GP1BB (ENSNSUG00000009733) #21	TBX1 (ENSNSUG00000009734) #22	ENSNSUG00000009735	TXNRD2 (ENSNSUG00000009736) #24	COMT (ENSNSUG00000009737) #25
Indian cobra	MODERN SPECIES	16	YDJC (ENSNNAG00000011568)	SDF2L1 (ENSNNAG00000011586)	TOP3B (ENSNNAG00000011644)	PPM1F (ENSNNAG00000011693)	MAPK1 (ENSNNAG00000011720)	PPIL2 (ENSNNAG00000010191)	HIRA (ENSNNAG00000010271) #14	MRPL40 (ENSNNAG00000011130) #15	C22orf39 (ENSNNAG00000011158) #16	UFD1 (ENSNNAG00000011177) #17	CDC45 (ENSNNAG00000011239) #18	CLDN5 (ENSNNAG00000011688) #19	ENSNNAG00000011740	SEPTIN5 (ENSNNAG00000011916) #20	GP1BB (ENSNNAG00000011996) #21	TBX1 (ENSNNAG00000012016) #22	GNB1L (ENSNNAG00000012051)	TXNRD2 (ENSNNAG00000012130) #24	COMT (ENSNNAG00000012952) #25	ARVCF (ENSNNAG00000012973) #26	TANGO2 (ENSNNAG00000013067) #27	DGCR8 (ENSNNAG00000013101) #28	TRMT2A (ENSNNAG00000013153) #29	ENSNNAG00000013172	ENSNNAG00000013184	ZDHHC8 (ENSNNAG00000013201) #31	PGAM5 (ENSNNAG00000013256)	ANKLE2 (ENSNNAG00000013278)	GOLGA3 (ENSNNAG00000013460)	CHFR (ENSNNAG00000013508)	ENSNNAG00000013570
tuatara	MODERN SPECIES	1417	SDF2L1 (ENSSPUG00000015703)	TOP3B (ENSSPUG00000015671)	PPM1F (ENSSPUG00000015642)	MAPK1 (ENSSPUG00000015630)	YPEL1 (ENSSPUG00000015624)	PPIL2 (ENSSPUG00000015614)	ENSSPUG00000015606	HIRA (ENSSPUG00000015576) #14	MRPL40 (ENSSPUG00000015559) #15	C22orf39 (ENSSPUG00000015555) #16	UFD1 (ENSSPUG00000015540) #17	CDC45 (ENSSPUG00000015397) #18	CLDN5 (ENSSPUG00000015373) #19	ENSSPUG00000015358	SEPTIN5 (ENSSPUG00000015346) #20	TBX1 (ENSSPUG00000015171) #22	GNB1L (ENSSPUG00000015114)	TXNRD2 (ENSSPUG00000015085) #24	COMT (ENSSPUG00000015073) #25	ARVCF (ENSSPUG00000015048) #26	TANGO2 (ENSSPUG00000015039) #27	DGCR8 (ENSSPUG00000014967) #28	TRMT2A (ENSSPUG00000014938) #29	RANBP1 (ENSSPUG00000014907) #30	ZDHHC8 (ENSSPUG00000014890) #31	PGAM5 (ENSSPUG00000014881)	ANKLE2 (ENSSPUG00000014865)	GOLGA3 (ENSSPUG00000014748)	ENSSPUG00000014731	ENSSPUG00000014722	FBRSL1 (ENSSPUG00000014703)
Archelosauria	ANCESTRAL SPECIES	14	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Archosauria	ANCESTRAL SPECIES	19	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Aves	ANCESTRAL SPECIES	19	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neognathae	ANCESTRAL SPECIES	15	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Galloanserae	ANCESTRAL SPECIES	13	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Phasianidae	ANCESTRAL SPECIES	13	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Phasianidae_b	ANCESTRAL SPECIES	13	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Chicken	MODERN SPECIES	6	SDF2L1 (ENSGALG00010024330)	TOP3B (ENSGALG00010024339)	PPM1F (ENSGALG00010024346)	MAPK3 (ENSGALG00010024358)	YPEL1 (ENSGALG00010024371)	PPIL2 (ENSGALG00010024387)	HIRA (ENSGALG00010024407) #14	MRPL40 (ENSGALG00010024425) #15	C22orf39 (ENSGALG00010024427) #16	UFD1L (ENSGALG00010024439) #17	CDC45 (ENSGALG00010024480) #18	CLDN5 (ENSGALG00010024495) #19	SEPTIN2L (ENSGALG00010027003)	SEPTIN5 (ENSGALG00010024509) #20	GP1BB (ENSGALG00010024525) #21	TBX1 (ENSGALG00010024528) #22	GNB1L (ENSGALG00010024549)	TXNRD2 (ENSGALG00010024575) #24	COMT (ENSGALG00010024592) #25	ARVCF (ENSGALG00010024616) #26	TANGO2 (ENSGALG00010024628) #27	DGCR8 (ENSGALG00010020797) #28	TRMT2A (ENSGALG00010020816) #29	RANBP1 (ENSGALG00010020833) #30	ZDHHC8 (ENSGALG00010021057) #31	ENSGALG00010021063	PGAM5 (ENSGALG00010021069)	ANKLE2 (ENSGALG00010021088)	GOLGA3 (ENSGALG00010021102)	CHFR (ENSGALG00010021134)	FBRSL1 (ENSGALG00010022226)
Japanese quail	MODERN SPECIES	6	YDJC (ENSCJPG00005019012)	SDF2L1 (ENSCJPG00005019013)	TOP3B (ENSCJPG00005019017)	PPM1F (ENSCJPG00005019018)	MAPK1 (ENSCJPG00005019019)	YPEL1 (ENSCJPG00005019020)	PPIL2 (ENSCJPG00005019021)	HIRA (ENSCJPG00005019052) #14	MRPL40 (ENSCJPG00005019053) #15	UFD1 (ENSCJPG00005019054) #17	CDC45 (ENSCJPG00005019055) #18	CLDN5 (ENSCJPG00005019056) #19	ENSCJPG00005019057	SEPTIN5 (ENSCJPG00005019059) #20	GP1BB (ENSCJPG00005019060) #21	TBX1 (ENSCJPG00005019062) #22	GNB1L (ENSCJPG00005019063)	TXNRD2 (ENSCJPG00005019064) #24	COMT (ENSCJPG00005019104) #25	ARVCF (ENSCJPG00005019105) #26	TANGO2 (ENSCJPG00005019153) #27	DGCR8 (ENSCJPG00005019155) #28	TRMT2A (ENSCJPG00005019158) #29	ENSCJPG00005019159	RANBP1 (ENSCJPG00005019160) #30	ZDHHC8 (ENSCJPG00005019162) #31	PGAM5 (ENSCJPG00005019163)	ANKLE2 (ENSCJPG00005019164)	GOLGA3 (ENSCJPG00005019165)	CHFR (ENSCJPG00005019219)	FBRSL1 (ENSCJPG00005019229)
Anatidae	ANCESTRAL SPECIES	25	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Duck	MODERN SPECIES	7	SDF2L1 (ENSAPLG00000005254)	TOP3B (ENSAPLG00000005306)	PPM1F (ENSAPLG00000006074)	MAPK1 (ENSAPLG00000006116)	YPEL1 (ENSAPLG00000026762)	PPIL2 (ENSAPLG00000005026)	ENSAPLG00000024984	HIRA (ENSAPLG00000004150) #14	MRPL40 (ENSAPLG00000004002) #15	C22orf39 (ENSAPLG00000000942) #16	UFD1 (ENSAPLG00000003494) #17	CLDN5 (ENSAPLG00000024722) #19	CDC45 (ENSAPLG00000016068) #18	SEPTIN5 (ENSAPLG00000016224) #20	GP1BB (ENSAPLG00000002296) #21	TBX1 (ENSAPLG00000023700) #22	GNB1L (ENSAPLG00000002318)	TXNRD2 (ENSAPLG00000002411) #24	COMT (ENSAPLG00000002789) #25	ARVCF (ENSAPLG00000002841) #26	TANGO2 (ENSAPLG00000003711) #27	DGCR8 (ENSAPLG00000004281) #28	ENSAPLG00000025595	TRMT2A (ENSAPLG00000004108) #29	RANBP1 (ENSAPLG00000003954) #30	ZDHHC8 (ENSAPLG00000003758) #31	PGAM5 (ENSAPLG00000003722)	ANKLE2 (ENSAPLG00000003408)	GOLGA3 (ENSAPLG00000003277)	CHFR (ENSAPLG00000002931)	FBRSL1 (ENSAPLG00000002858)
Pink-footed goose	MODERN SPECIES	60	SDF2L1 (ENSABRG00000014402)	TOP3B (ENSABRG00000014415)	PPM1F (ENSABRG00000014549)	MAPK1 (ENSABRG00000014553)	YPEL1 (ENSABRG00000014559)	PPIL2 (ENSABRG00000014570)	HIRA (ENSABRG00000014830) #14	MRPL40 (ENSABRG00000014886) #15	C22orf39 (ENSABRG00000014887) #16	UFD1 (ENSABRG00000014919) #17	CDC45 (ENSABRG00000015254) #18	CLDN5 (ENSABRG00000015291) #19	ENSABRG00000015294	SEPTIN5 (ENSABRG00000015305) #20	GP1BB (ENSABRG00000015314) #21	TBX1 (ENSABRG00000015316) #22	GNB1L (ENSABRG00000015322)	TXNRD2 (ENSABRG00000015330) #24	COMT (ENSABRG00000015450) #25	ARVCF (ENSABRG00000015471) #26	TANGO2 (ENSABRG00000015481) #27	DGCR8 (ENSABRG00000015489) #28	TRMT2A (ENSABRG00000015699) #29	RANBP1 (ENSABRG00000015749) #30	ZDHHC8 (ENSABRG00000015760) #31	PGAM5 (ENSABRG00000015763)	ANKLE2 (ENSABRG00000015773)	GOLGA3 (ENSABRG00000016040)	CHFR (ENSABRG00000016290)	FBRSL1 (ENSABRG00000016430)	GALNT9 (ENSABRG00000016507)
Neognathae_b	ANCESTRAL SPECIES	27	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neognathae_c	ANCESTRAL SPECIES	16	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT01100000263932	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Kakapo	MODERN SPECIES	3	SDF2L1 (ENSSHBG00005009225)	TOP3B (ENSSHBG00005009182)	PPM1F (ENSSHBG00005009172)	MAPK1 (ENSSHBG00005009151)	YPEL1 (ENSSHBG00005000957)	PPIL2 (ENSSHBG00005018275)	HIRA (ENSSHBG00005018270) #14	MRPL40 (ENSSHBG00005018265) #15	C22orf39 (ENSSHBG00005018264) #16	UFD1 (ENSSHBG00005018257) #17	CDC45 (ENSSHBG00005018247) #18	CLDN5 (ENSSHBG00005018240) #19	ENSSHBG00005018237	SEPTIN5 (ENSSHBG00005018234) #20	GP1BB (ENSSHBG00005018232) #21	TBX1 (ENSSHBG00005018229) #22	GNB1L (ENSSHBG00005018226)	TXNRD2 (ENSSHBG00005018221) #24	COMT (ENSSHBG00005018218) #25	ARVCF (ENSSHBG00005018194) #26	TANGO2 (ENSSHBG00005018182) #27	DGCR8 (ENSSHBG00005018175) #28	TRMT2A (ENSSHBG00005018166) #29	RANBP1 (ENSSHBG00005018157) #30	ZDHHC8 (ENSSHBG00005018153) #31	PGAM5 (ENSSHBG00005018149)	ANKLE2 (ENSSHBG00005018143)	GOLGA3 (ENSSHBG00005017108)	CHFR (ENSSHBG00005017001)	FBRSL1 (ENSSHBG00005016988)	GALNT9 (ENSSHBG00005016981)
Golden eagle	MODERN SPECIES	25	SDF2L1 (ENSACCG00020003830)	TOP3B (ENSACCG00020003778)	PPM1F (ENSACCG00020003758)	MAPK1 (ENSACCG00020003738)	YPEL1 (ENSACCG00020003724)	PPIL2 (ENSACCG00020003705)	HIRA (ENSACCG00020003675) #14	MRPL40 (ENSACCG00020003653) #15	C22orf39 (ENSACCG00020003645) #16	UFD1 (ENSACCG00020003625) #17	CDC45 (ENSACCG00020003595) #18	CLDN5 (ENSACCG00020003572) #19	ENSACCG00020003549	SEPTIN5 (ENSACCG00020003519) #20	GP1BB (ENSACCG00020003504) #21	TBX1 (ENSACCG00020003493) #22	GNB1L (ENSACCG00020003467)	TXNRD2 (ENSACCG00020003433) #24	COMT (ENSACCG00020003409) #25	ENSACCG00020003363 #26	ENSACCG00020003318 #26	TANGO2 (ENSACCG00020003304) #27	DGCR8 (ENSACCG00020003266) #28	ENSACCG00020003249	TRMT2A (ENSACCG00020003237) #29	RANBP1 (ENSACCG00020003222) #30	ZDHHC8 (ENSACCG00020003211) #31	PGAM5 (ENSACCG00020003198)	ANKLE2 (ENSACCG00020003179)	GOLGA3 (ENSACCG00020002969)	CHFR (ENSACCG00020002595)
Passeriformes	ANCESTRAL SPECIES	15	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00970000193655	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Great tit	MODERN SPECIES	6	SDF2L1 (ENSPMJG00000014277)	TOP3B (ENSPMJG00000014271)	PPM1F (ENSPMJG00000014270)	MAPK1 (ENSPMJG00000014268)	YPEL1 (ENSPMJG00000014267)	PPIL2 (ENSPMJG00000014263)	HIRA (ENSPMJG00000014257) #14	MRPL40 (ENSPMJG00000014255) #15	UFD1 (ENSPMJG00000014253) #17	CDC45 (ENSPMJG00000014244) #18	CLDN5 (ENSPMJG00000014243) #19	ENSPMJG00000014238	SEPTIN5 (ENSPMJG00000014235) #20	ENSPMJG00000014233 #21	ENSPMJG00000014230	TBX1 (ENSPMJG00000014229) #22	GNB1L (ENSPMJG00000014228)	TXNRD2 (ENSPMJG00000014227) #24	COMT (ENSPMJG00000014222) #25	ENSPMJG00000014220 #26	ENSPMJG00000014218 #26	TANGO2 (ENSPMJG00000014215) #27	DGCR8 (ENSPMJG00000014211) #28	ENSPMJG00000014210	TRMT2A (ENSPMJG00000014209) #29	RANBP1 (ENSPMJG00000014206) #30	ZDHHC8 (ENSPMJG00000014205) #31	PGAM5 (ENSPMJG00000014203)	ANKLE2 (ENSPMJG00000014202)	GOLGA3 (ENSPMJG00000014194)	CHFR (ENSPMJG00000014183)
Passeriformes_d	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796.v	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Flycatcher	MODERN SPECIES	6	ENSFALG00000024195	ENSFALG00000007880	SDF2L1 (ENSFALG00000007890)	TOP3B (ENSFALG00000007908)	PPM1F (ENSFALG00000007926)	MAPK1 (ENSFALG00000007935)	YPEL1 (ENSFALG00000028339)	PPIL2 (ENSFALG00000007955)	HIRA (ENSFALG00000007974) #14	MRPL40 (ENSFALG00000023636) #15	UFD1 (ENSFALG00000007990) #17	CDC45 (ENSFALG00000007995) #18	CLDN5 (ENSFALG00000014507) #19	SEPTIN5 (ENSFALG00000008028) #20	GP1BB (ENSFALG00000014523) #21	TBX1 (ENSFALG00000027012) #22	GNB1L (ENSFALG00000008056)	TXNRD2 (ENSFALG00000008065) #24	COMT (ENSFALG00000008069) #25	ARVCF (ENSFALG00000008093) #26	TANGO2 (ENSFALG00000027944) #27	TRMT2A (ENSFALG00000008162) #29	DGCR8 (ENSFALG00000008149) #28	ENSFALG00000008187 #31	ENSFALG00000027639	ENSFALG00000026312	ANKLE2 (ENSFALG00000008217)	GOLGA3 (ENSFALG00000008223)	CHFR (ENSFALG00000008235)	FBRSL1 (ENSFALG00000008244)	GALNT9 (ENSFALG00000025740)
Passeriformes_g	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Passeroidea	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00970000193655	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Zebra finch	MODERN SPECIES	6	SDF2L1 (ENSTGUG00000008678)	TOP3B (ENSTGUG00000008644)	PPM1F (ENSTGUG00000026544)	MAPK1 (ENSTGUG00000008602)	YPEL1 (ENSTGUG00000023955)	PPIL2 (ENSTGUG00000008567)	HIRA (ENSTGUG00000008538) #14	MRPL40 (ENSTGUG00000008534) #15	C22orf39 (ENSTGUG00000008531) #16	UFD1 (ENSTGUG00000008505) #17	CDC45 (ENSTGUG00000008459) #18	CLDN5 (ENSTGUG00000024890) #19	ENSTGUG00000008445	SEPTIN5 (ENSTGUG00000008412) #20	GP1BB (ENSTGUG00000028476) #21	TBX1 (ENSTGUG00000008395) #22	GNB1L (ENSTGUG00000029275)	TXNRD2 (ENSTGUG00000008350) #24	COMT (ENSTGUG00000021688) #25	ARVCF (ENSTGUG00000008310) #26	TANGO2 (ENSTGUG00000023918) #27	DGCR8 (ENSTGUG00000026902) #28	TRMT2A (ENSTGUG00000025321) #29	RANBP1 (ENSTGUG00000008294) #30	ZDHHC8 (ENSTGUG00000008274) #31	PGAM5 (ENSTGUG00000008267)	ANKLE2 (ENSTGUG00000008251)	GOLGA3 (ENSTGUG00000008219)	CHFR (ENSTGUG00000008181)	FBRSL1 (ENSTGUG00000008161)	GALNT9 (ENSTGUG00000008131)
Common canary	MODERN SPECIES	18	YDJC (ENSSCAG00000004645)	SDF2L1 (ENSSCAG00000004647)	TOP3B (ENSSCAG00000004656)	PPM1F (ENSSCAG00000004660)	MAPK1 (ENSSCAG00000004664)	YPEL1 (ENSSCAG00000004670)	PPIL2 (ENSSCAG00000004674)	HIRA (ENSSCAG00000004679) #14	MRPL40 (ENSSCAG00000004687) #15	ENSSCAG00000004688 #16	UFD1 (ENSSCAG00000004690) #17	CDC45 (ENSSCAG00000004694) #18	ENSSCAG00000004699	SEPTIN5 (ENSSCAG00000004702) #20	GP1BB (ENSSCAG00000004704) #21	TBX1 (ENSSCAG00000004709) #22	GNB1L (ENSSCAG00000004716)	TXNRD2 (ENSSCAG00000004728) #24	COMT (ENSSCAG00000004738) #25	ARVCF (ENSSCAG00000004744) #26	TANGO2 (ENSSCAG00000004750) #27	DGCR8 (ENSSCAG00000004756) #28	TRMT2A (ENSSCAG00000004763) #29	ENSSCAG00000004768	RANBP1 (ENSSCAG00000004771) #30	ZDHHC8 (ENSSCAG00000004783) #31	PGAM5 (ENSSCAG00000004789)	ANKLE2 (ENSSCAG00000004790)	GOLGA3 (ENSSCAG00000004796)	CHFR (ENSSCAG00000004818)	FBRSL1 (ENSSCAG00000004832)
Medium ground finch	MODERN SPECIES	33	ENSGFOG00000000284	YDJC (ENSGFOG00000000277)	SDF2L1 (ENSGFOG00000000267)	TOP3B (ENSGFOG00000000246)	PPM1F (ENSGFOG00000000237)	MAPK1 (ENSGFOG00000000227)	YPEL1 (ENSGFOG00000000215)	PPIL2 (ENSGFOG00000000205)	HIRA (ENSGFOG00000000185) #14	MRPL40 (ENSGFOG00000000175) #15	UFD1 (ENSGFOG00000000172) #17	CDC45 (ENSGFOG00000000163) #18	ENSGFOG00000000148	SEPTIN5 (ENSGFOG00000000119) #20	GP1BB (ENSGFOG00000000108) #21	TBX1 (ENSGFOG00000000104) #22	GNB1L (ENSGFOG00000000097)	TXNRD2 (ENSGFOG00000008851) #24	COMT (ENSGFOG00000008830) #25	ARVCF (ENSGFOG00000008748) #26	TANGO2 (ENSGFOG00000008719) #27	DGCR8 (ENSGFOG00000008706) #28	TRMT2A (ENSGFOG00000008593) #29	RANBP1 (ENSGFOG00000008539) #30	ZDHHC8 (ENSGFOG00000008532) #31	PGAM5 (ENSGFOG00000008526)	ANKLE2 (ENSGFOG00000008520)	GOLGA3 (ENSGFOG00000008501)	CHFR (ENSGFOG00000008484)	FBRSL1 (ENSGFOG00000008443)	ENSGFOG00000008434
Cryptodira	ANCESTRAL SPECIES	28	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Testudinoidea	ANCESTRAL SPECIES	26	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Testudinidae	ANCESTRAL SPECIES	32	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832.e #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Goode s thornscrub tortoise	MODERN SPECIES	4	SDF2L1 (ENSGEVG00005010655)	TOP3B (ENSGEVG00005010517)	PPM1F (ENSGEVG00005010482)	MAPK1 (ENSGEVG00005010443)	YPEL1 (ENSGEVG00005010427)	PPIL2 (ENSGEVG00005010363)	HIRA (ENSGEVG00005010294) #14	MRPL40 (ENSGEVG00005010273) #15	C22orf39 (ENSGEVG00005010249) #16	UFD1 (ENSGEVG00005010153) #17	CDC45 (ENSGEVG00005009692) #18	CLDN5 (ENSGEVG00005009598) #19	ENSGEVG00005009572	SEPTIN5 (ENSGEVG00005020840) #20	GP1BB (ENSGEVG00005020833) #21	TBX1 (ENSGEVG00005020830) #22	GNB1L (ENSGEVG00005020821)	TXNRD2 (ENSGEVG00005020803) #24	COMT (ENSGEVG00005020794) #25	ARVCF (ENSGEVG00005020783) #26	TANGO2 (ENSGEVG00005020772) #27	DGCR8 (ENSGEVG00005020763) #28	TRMT2A (ENSGEVG00005020759) #29	RANBP1 (ENSGEVG00005020755) #30	ZDHHC8 (ENSGEVG00005020749) #31	PGAM5 (ENSGEVG00005020745)	ANKLE2 (ENSGEVG00005020740)	GOLGA3 (ENSGEVG00005020729)	CHFR (ENSGEVG00005020717)	FBRSL1 (ENSGEVG00005020705)	GALNT9 (ENSGEVG00005020699)
Abingdon island giant tortoise	MODERN SPECIES	41	TOP3B (ENSCABG00000020648)	PPM1F (ENSCABG00000020750)	ENSCABG00000020752	MAPK1 (ENSCABG00000020755)	YPEL1 (ENSCABG00000020760)	PPIL2 (ENSCABG00000020779)	HIRA (ENSCABG00000020900) #14	MRPL40 (ENSCABG00000020918) #15	C22orf39 (ENSCABG00000020932) #16	UFD1 (ENSCABG00000020940) #17	CDC45 (ENSCABG00000020946) #18	CLDN5 (ENSCABG00000020954) #19	ENSCABG00000020955	SEPTIN5 (ENSCABG00000020957) #20	GP1BB (ENSCABG00000020960) #21	TBX1 (ENSCABG00000020963) #22	GNB1L (ENSCABG00000020967)
Emydidae	ANCESTRAL SPECIES	37	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Three-toed box turtle	MODERN SPECIES	109	TOP3B (ENSTMTG00000006641)	PPM1F (ENSTMTG00000006621)	MAPK1 (ENSTMTG00000006600)	YPEL1 (ENSTMTG00000006588)	ENSTMTG00000006576	PPIL2 (ENSTMTG00000006549)	HIRA (ENSTMTG00000006496) #14	MRPL40 (ENSTMTG00000006483) #15	C22orf39 (ENSTMTG00000006471) #16	UFD1 (ENSTMTG00000006450) #17	CDC45 (ENSTMTG00000006349) #18	CLDN5 (ENSTMTG00000006328) #19	ENSTMTG00000006318	SEPTIN5 (ENSTMTG00000006302) #20	GP1BB (ENSTMTG00000006293) #21	TBX1 (ENSTMTG00000006219) #22	GNB1L (ENSTMTG00000006189)	TXNRD2 (ENSTMTG00000006150) #24	COMT (ENSTMTG00000006124) #25	ENSTMTG00000006082 #26	ENSTMTG00000006066 #26	TANGO2 (ENSTMTG00000006032) #27	DGCR8 (ENSTMTG00000005978) #28	TRMT2A (ENSTMTG00000005948) #29	RANBP1 (ENSTMTG00000005921) #30	ZDHHC8 (ENSTMTG00000005901) #31	PGAM5 (ENSTMTG00000005881)	ANKLE2 (ENSTMTG00000005808)	GOLGA3 (ENSTMTG00000005713)	CHFR (ENSTMTG00000005664)	FBRSL1 (ENSTMTG00000005619)
painted turtle	MODERN SPECIES	712	SDF2L1 (ENSCPBG00000010543)	TOP3B (ENSCPBG00000010556)	PPM1F (ENSCPBG00000010561)	MAPK1 (ENSCPBG00000010567)	YPEL1 (ENSCPBG00000010573)	PPIL2 (ENSCPBG00000010578)	HIRA (ENSCPBG00000010600) #14	MRPL40 (ENSCPBG00000010618) #15	C22orf39 (ENSCPBG00000010621) #16	UFD1 (ENSCPBG00000010625) #17	CDC45 (ENSCPBG00000010632) #18	CLDN5 (ENSCPBG00000010642) #19	ENSCPBG00000010648	SEPTIN5 (ENSCPBG00000010660) #20	ENSCPBG00000010670 #21	TBX1 (ENSCPBG00000010673) #22	GNB1L (ENSCPBG00000010679)	TXNRD2 (ENSCPBG00000010687) #24	COMT (ENSCPBG00000010707) #25	ARVCF (ENSCPBG00000010719) #26	ENSCPBG00000010734	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010743	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010762	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010780	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010802	ENSCPBG00000010809	ENSCPBG00000010822
Chinese turtle	MODERN SPECIES	802														ENSPSIG00000001452	ENSPSIG00000001460	TBX1 (ENSPSIG00000008075) #22	GNB1L (ENSPSIG00000008292)
Anura	ANCESTRAL SPECIES	4	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #15	ENSGT00390000002511 #16	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000155317.b.b #25	ENSGT00940000155317.b.a.a #25	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Frog	MODERN SPECIES		ydjc (ENSXETG00000022426)	sdf2l1 (ENSXETG00000018564)	egfl7 (ENSXETG00000018565)	ppm1f (ENSXETG00000018572)	mapk1 (ENSXETG00000018576)	ypel1 (ENSXETG00000024940)	ppil2 (ENSXETG00000018594)	hira (ENSXETG00000018598) #14	mrpl40 (ENSXETG00000018600) #15	c22orf39 (ENSXETG00000036919) #16	ufd1 (ENSXETG00000018601) #17	cdc45 (ENSXETG00000018602) #18	cldn5 (ENSXETG00000047956) #19	septin5 (ENSXETG00000030888)	gp1bb (ENSXETG00000034628) #21	tbx1 (ENSXETG00000039391) #22	gnb1l (ENSXETG00000006305)	txnrd2 (ENSXETG00000006307) #24	comt (ENSXETG00000006315) #25	comt.2 (ENSXETG00000024946) #25	ENSXETG00000033321 #25	arvcf (ENSXETG00000006316) #26	tango2 (ENSXETG00000006319) #27	dgcr8 (ENSXETG00000006320) #28	ENSXETG00000041542	trmt2a (ENSXETG00000006323) #29	ENSXETG00000040329	ranbp1 (ENSXETG00000034836)	pgam5 (ENSXETG00000023845) #31	ankle2 (ENSXETG00000023848)	golga3 (ENSXETG00000023849)
Leishan spiny toad	MODERN SPECIES		MRPL40 (ENSLLEG00000007785) #15	C22orf39 (ENSLLEG00000007764) #16	ENSLLEG00000007745	ENSLLEG00000007722	UFD1 (ENSLLEG00000007650) #17	CDC45 (ENSLLEG00000007462) #18	ENSLLEG00000007427	CLDN5 (ENSLLEG00000007411) #19	ENSLLEG00000007380	ENSLLEG00000007374	ENSLLEG00000006878	SEPTIN5 (ENSLLEG00000006544) #20	GP1BB (ENSLLEG00000006477) #21	ENSLLEG00000006469	ENSLLEG00000006448	TBX1 (ENSLLEG00000006268) #22	ENSLLEG00000006246	ENSLLEG00000006233	GNB1L (ENSLLEG00000006175)	TXNRD2 (ENSLLEG00000006086) #24	ENSLLEG00000006036 #25	ENSLLEG00000006012	ENSLLEG00000005976 #25	ENSLLEG00000005960	ENSLLEG00000005884 #25	ENSLLEG00000005861	ENSLLEG00000005845	ARVCF (ENSLLEG00000005551) #26	ENSLLEG00000005495	TANGO2 (ENSLLEG00000005398) #27	DGCR8 (ENSLLEG00000005288) #28
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2584													ENSLACG00000007648	CTNND1 (ENSLACG00000006081)	FTSJ3 (ENSLACG00000005523)	ENSLACG00000004994 #22	CABP4 (ENSLACG00000004697)	ENSLACG00000004017	ENSLACG00000003373	ENSLACG00000002958	TIMM10 (ENSLACG00000002468)	SLC43A1 (ENSLACG00000000742)
Coelacanth	MODERN SPECIES	281	PPM1F (ENSLACG00000013822)	MAPK1 (ENSLACG00000013972)	ENSLACG00000014276	PPIL2 (ENSLACG00000014641)	ENSLACG00000014938	HIRA (ENSLACG00000014956) #14	MRPL40 (ENSLACG00000015070) #15	C22orf39 (ENSLACG00000015095) #16	UFD1 (ENSLACG00000015135) #17	CDC45 (ENSLACG00000015166) #18	CLDN5 (ENSLACG00000015285) #19	zgc:63587 (ENSLACG00000015335)	SEPTIN5 (ENSLACG00000015559) #20	GP1BB (ENSLACG00000022424) #21	ENSLACG00000015988	TBX1 (ENSLACG00000016333) #22	GNB1L (ENSLACG00000016464)	TXNRD2 (ENSLACG00000016608) #24	ENSLACG00000016734 #25	ARVCF (ENSLACG00000016764) #26	TANGO2 (ENSLACG00000017405) #27	DGCR8 (ENSLACG00000017462) #28	TRMT2A (ENSLACG00000017494) #29	RANBP1 (ENSLACG00000017512) #30	ZDHHC8 (ENSLACG00000017552) #31	PGAM5 (ENSLACG00000017696)	GOLGA3 (ENSLACG00000017720)	ANKLE2 (ENSLACG00000017772)	ENSLACG00000017838	ENSLACG00000017852	CHFR (ENSLACG00000017864)
Actinopterygii	ANCESTRAL SPECIES	22	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00990000204357	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neopterygii	ANCESTRAL SPECIES	14	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00990000204357	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027 #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00870000136917
Osteoglossocephalai	ANCESTRAL SPECIES	5	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	19	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299.e	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b.a #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000165623	ENSGT00730000110943.B.d.b.b
Asian bonytongue	MODERN SPECIES	3	bmp10 (ENSSFOG00015029317)	arhgap25 (ENSSFOG00015018394)	cds2 (ENSSFOG00015030400)	zgc:65851 (ENSSFOG00015018334)	MXD1 (ENSSFOG00015018325)	snrnp27 (ENSSFOG00015018311)	add2 (ENSSFOG00015018266)	figla (ENSSFOG00015018250)	hk2 (ENSSFOG00015018184)	NPFFR1 (ENSSFOG00015017979)	tet3 (ENSSFOG00015017946)	ap3m2 (ENSSFOG00015017909)	kat6a (ENSSFOG00015028324)	ENSSFOG00015017836	sema4c (ENSSFOG00015017817)	tbx1 (ENSSFOG00015017805) #22	gnb1l (ENSSFOG00015017782)	TXNRD2 (ENSSFOG00015017725) #24	arvcfb (ENSSFOG00015017612) #26	tango2 (ENSSFOG00015032693) #27	dgcr8 (ENSSFOG00015017499) #28	ENSSFOG00015017493	trmt2a (ENSSFOG00015017419) #29	RANBP1 (ENSSFOG00015017322) #30	zdhhc8b (ENSSFOG00015017216) #31	pgam5 (ENSSFOG00015025983)	ankle2 (ENSSFOG00015017117)	golga3 (ENSSFOG00015016992)	chfr (ENSSFOG00015016911)	FBRSL1 (ENSSFOG00015029146)	GALNT9 (ENSSFOG00015016856)
P. kingsleyae	MODERN SPECIES	131					add2 (ENSPKIG00000011946)	figla (ENSPKIG00000011920)	ENSPKIG00000011693	hk2 (ENSPKIG00000011519)	NPFFR1 (ENSPKIG00000011483)	ENSPKIG00000011463	tet3 (ENSPKIG00000011353)	ap3m2 (ENSPKIG00000011261)	kat6a (ENSPKIG00000011149)	ENSPKIG00000011056	sema4c (ENSPKIG00000011012)	tbx1 (ENSPKIG00000010974) #22	gnb1l (ENSPKIG00000010949)	TXNRD2 (ENSPKIG00000010831) #24	ENSPKIG00000010768	ARVCF (ENSPKIG00000010527) #26	tango2 (ENSPKIG00000010409) #27	dgcr8 (ENSPKIG00000010338) #28	trmt2a (ENSPKIG00000010268) #29	ENSPKIG00000010230	RANBP1 (ENSPKIG00000010195) #30	zdhhc8b (ENSPKIG00000010158) #31	pgam5 (ENSPKIG00000010127)	ankle2 (ENSPKIG00000010084)	golga3 (ENSPKIG00000009961)	chfr (ENSPKIG00000009865)	FBRSL1 (ENSPKIG00000009663)
Osteoglossiformes	ANCESTRAL SPECIES	47	ENSGT00940000166787	ENSGT00940000153340.B	ENSGT00940000157856	ENSGT00390000014879.c.a.a.a	ENSGT00940000156185	ENSGT00390000006707	ENSGT00390000011206.a	ENSGT00390000006867	ENSGT00390000001280.b	ENSGT00940000154779.a.b.a	ENSGT00390000014909	ENSGT00940000166216	ENSGT00950000182904.a.b.a	ENSGT00940000159299.f	ENSGT01070000253744.b.a.a.a.a	ENSGT00940000154816.a.b.b #22	ENSGT00940000157027.n.b.g #26	ENSGT00940000158044.b ##31	ENSGT00940000160709	ENSGT00940000156599	ENSGT00730000110943.B.d.b.a	ENSGT00940000158390.n	ENSGT00390000017751.l	ENSGT00940000155882.a.b.b	ENSGT00940000160605.h	ENSGT00940000155735.r	ENSGT00420000029890	ENSGT00940000155845.t	ENSGT00940000159368.a	ENSGT00390000009869	ENSGT00390000014052
P. kingsleyae	MODERN SPECIES	2	drg1 (ENSPKIG00000022572)	STARD7 (ENSPKIG00000022629)	SLC20A1 (ENSPKIG00000022658)	gmcl1 (ENSPKIG00000022681)	fam136a (ENSPKIG00000022708)	pcyox1 (ENSPKIG00000022738)	DTWD2 (ENSPKIG00000022765)	snx24 (ENSPKIG00000022799)	loxa (ENSPKIG00000022841)	GGCX (ENSPKIG00000022863)	ska1 (ENSPKIG00000022897)	ENSPKIG00000022915	KCNN2 (ENSPKIG00000022932)	ADD2 (ENSPKIG00000022954)	npffr1l3 (ENSPKIG00000023004)	tbx1 (ENSPKIG00000023058) #22	ARVCF (ENSPKIG00000023100) #26	ENSPKIG00000023156 ##31	PGAM5 (ENSPKIG00000023184)	ANKLE2 (ENSPKIG00000023197)	FBRSL1 (ENSPKIG00000023251)	GALNT9 (ENSPKIG00000023350)	SUSD2 (ENSPKIG00000023406)	kremen1 (ENSPKIG00000023462)	ZNRF3 (ENSPKIG00000023489)	xbp1 (ENSPKIG00000023506)	hspb15 (ENSPKIG00000023519)	HSPB8 (ENSPKIG00000023530)	ENSPKIG00000023541	ENSPKIG00000023554	tescb (ENSPKIG00000023600)
Asian bonytongue	MODERN SPECIES	21	slc20a1b (ENSSFOG00015016452)	gmcl1 (ENSSFOG00015016487)	fam136a (ENSSFOG00015025273)	pcyox1 (ENSSFOG00015016539)	DTWD2 (ENSSFOG00015032604)	snx24 (ENSSFOG00015016591)	loxa (ENSSFOG00015025004)	GGCX (ENSSFOG00015016692)	ska1 (ENSSFOG00015026613)	ENSSFOG00015026855	smarcad1a (ENSSFOG00015016814)	KCNN2 (ENSSFOG00015016842)	BMP10 (ENSSFOG00015016881)	ADD2 (ENSSFOG00015016901)	NPFFR1 (ENSSFOG00015016915)	tbx1 (ENSSFOG00015027302) #22	ARVCF (ENSSFOG00015016993) #26	ENSSFOG00015027703 ##31	PGAM5 (ENSSFOG00015017014)	ANKLE2 (ENSSFOG00015017024)	FBRSL1 (ENSSFOG00015031341)	GALNT9 (ENSSFOG00015017067)	SUSD2 (ENSSFOG00015017104)	kremen1 (ENSSFOG00015017139)	xbp1 (ENSSFOG00015017151)	hspb15 (ENSSFOG00015017164)	HSPB8 (ENSSFOG00015029913)	ENSSFOG00015031951	TAOK3 (ENSSFOG00015017178)	m17 (ENSSFOG00015026889)	tescb (ENSSFOG00015017213)
Clupeocephala	ANCESTRAL SPECIES	29	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Acanthomorphata	ANCESTRAL SPECIES	46	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Pinecone sodierfish	MODERN SPECIES	23	cds2 (ENSMMDG00005023448)	zgc:65851 (ENSMMDG00005023430)	MXD1 (ENSMMDG00005023425)	snrnp27 (ENSMMDG00005023424)	add2 (ENSMMDG00005023423)	figla (ENSMMDG00005023421)	hk2 (ENSMMDG00005021996)	ENSMMDG00005021917	tet3 (ENSMMDG00005021857)	ap3m2 (ENSMMDG00005021855)	ENSMMDG00005021852	ENSMMDG00005021850	ENSMMDG00005021848	ENSMMDG00005021845	sema4c (ENSMMDG00005021843)	tbx1 (ENSMMDG00005021841) #22	gnb1l (ENSMMDG00005021837)	TXNRD2 (ENSMMDG00005021329) #24	arvcfb (ENSMMDG00005020533) #26	tango2 (ENSMMDG00005020494) #27	dgcr8 (ENSMMDG00005020080) #28	ENSMMDG00005020063	trmt2a (ENSMMDG00005019787) #29	ranbp1 (ENSMMDG00005019746)	zdhhc8b (ENSMMDG00005019741) #31	pgam5 (ENSMMDG00005019739)	ENSMMDG00005019737	ankle2 (ENSMMDG00005019731)	golga3 (ENSMMDG00005018024)	chfr (ENSMMDG00005017160)	FBRSL1 (ENSMMDG00005017124)
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Tiger tail seahorse	MODERN SPECIES	341	bmp10 (ENSHCOG00000005298)	arhgap25 (ENSHCOG00000005276)	cds2 (ENSHCOG00000005262)	zgc:65851 (ENSHCOG00000005156)	MXD1 (ENSHCOG00000004368)	snrnp27 (ENSHCOG00000004346)	add2 (ENSHCOG00000004337)	figla (ENSHCOG00000000115)	hk2 (ENSHCOG00000004285)	NPFFR1 (ENSHCOG00000004271)	tet3 (ENSHCOG00000004254)	ap3m2 (ENSHCOG00000004217)	kat6a (ENSHCOG00000004200)	ENSHCOG00000004169	sema4c (ENSHCOG00000004142)	tbx1 (ENSHCOG00000004020) #22	gnb1l (ENSHCOG00000004002)	ENSHCOG00000003979 #24	TXNRD2 (ENSHCOG00000003919) #24	arvcfb (ENSHCOG00000003773) #26	tango2 (ENSHCOG00000003325) #27	dgcr8 (ENSHCOG00000003315) #28	trmt2a (ENSHCOG00000003282) #29	ENSHCOG00000003260	ranbp1 (ENSHCOG00000003250)	zdhhc8b (ENSHCOG00000003233) #31	pgam5 (ENSHCOG00000003196)	ankle2 (ENSHCOG00000003182)	golga3 (ENSHCOG00000003156)	chfr (ENSHCOG00000003101)	ENSHCOG00000003084
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b
Fugu	MODERN SPECIES	13	bmp10 (ENSTRUG00000020938)	arhgap25 (ENSTRUG00000014999)	cds2 (ENSTRUG00000014941)	zgc:65851 (ENSTRUG00000014904)	MXD1 (ENSTRUG00000027715)	snrnp27 (ENSTRUG00000014833)	add2 (ENSTRUG00000014733)	figla (ENSTRUG00000014725)	hk2 (ENSTRUG00000014540)	NPFFR1 (ENSTRUG00000014473)	tet3 (ENSTRUG00000020359)	ap3m2 (ENSTRUG00000014366)	kat6a (ENSTRUG00000014143)	ENSTRUG00000025762	sema4c (ENSTRUG00000014047)	tbx1 (ENSTRUG00000014017) #22	gnb1l (ENSTRUG00000013988)	TXNRD2 (ENSTRUG00000013903) #24	arvcfb (ENSTRUG00000013715) #26	tango2 (ENSTRUG00000013653) #27	dgcr8 (ENSTRUG00000013594) #28	trmt2a (ENSTRUG00000013546) #29	ranbp1 (ENSTRUG00000013504)	zdhhc8 (ENSTRUG00000013397) #31	pgam5 (ENSTRUG00000013340)	ankle2 (ENSTRUG00000013275)	golga3 (ENSTRUG00000013241)	chfr (ENSTRUG00000013079)	FBRSL1 (ENSTRUG00000012985)	GALNT9 (ENSTRUG00000012871)	atad1a (ENSTRUG00000012810)
Tetraodon	MODERN SPECIES	3	ERLIN2 (ENSTNIG00000011431)	ENSTNIG00000011430	bmp10 (ENSTNIG00000011429)	arhgap25 (ENSTNIG00000011428)	cds2 (ENSTNIG00000011427)	MXD1 (ENSTNIG00000000414)	snrnp27 (ENSTNIG00000016775)	add2 (ENSTNIG00000016774)	figla (ENSTNIG00000016773)	hk2 (ENSTNIG00000016772)	NPFFR1 (ENSTNIG00000016771)	tet3 (ENSTNIG00000016770)	ap3m2 (ENSTNIG00000001177)	kat6a (ENSTNIG00000016769)	sema4c (ENSTNIG00000016768)	tbx1 (ENSTNIG00000016767) #22	gnb1l (ENSTNIG00000016766)	TXNRD2 (ENSTNIG00000016765) #24	arvcfb (ENSTNIG00000016764) #26	tango2 (ENSTNIG00000016763) #27	dgcr8 (ENSTNIG00000016762) #28	trmt2a (ENSTNIG00000016761) #29	ranbp1 (ENSTNIG00000016760)	zdhhc8b (ENSTNIG00000016759) #31	pgam5 (ENSTNIG00000016758)	ankle2 (ENSTNIG00000016757)	ENSTNIG00000016756	ENSTNIG00000016755	chfr (ENSTNIG00000016754)	ENSTNIG00000016753	GALNT9 (ENSTNIG00000016752)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Ballan wrasse	MODERN SPECIES	366																tbx1 (ENSLBEG00000010837) #22	gnb1l (ENSLBEG00000010857)	ENSLBEG00000010935 #24
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Perciformes	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709
Lumpfish	MODERN SPECIES	24	bmp10 (ENSCLMG00005017918)	arhgap25 (ENSCLMG00005017919)	cds2 (ENSCLMG00005017925)	zgc:65851 (ENSCLMG00005018327)	ENSCLMG00005018409	snrnp27 (ENSCLMG00005018410)	add2 (ENSCLMG00005018416)	figla (ENSCLMG00005018482)	hk2 (ENSCLMG00005018529)	ENSCLMG00005020830	tet3 (ENSCLMG00005020831)	ap3m2 (ENSCLMG00005020834)	kat6a (ENSCLMG00005020842)	ENSCLMG00005020846	sema4c (ENSCLMG00005020848)	tbx1 (ENSCLMG00005020851) #22	gnb1l (ENSCLMG00005020854)	TXNRD2 (ENSCLMG00005020866) #24	arvcfb (ENSCLMG00005004255) #26	tango2 (ENSCLMG00005004831) #27	dgcr8 (ENSCLMG00005004858) #28	trmt2a (ENSCLMG00005005979) #29	ENSCLMG00005005990	ranbp1 (ENSCLMG00005005992)	zdhhc8b (ENSCLMG00005005994) #31	piwil2 (ENSCLMG00005005997)	ENSCLMG00005005999	atad1a (ENSCLMG00005006001)	GALNT9 (ENSCLMG00005006002)	FBRSL1 (ENSCLMG00005006003)	chfr (ENSCLMG00005006044)
Stickleback	MODERN SPECIES	12	arhgap25 (ENSGACG00000013273)	cds2 (ENSGACG00000013234)	zgc:65851 (ENSGACG00000013231)	MXD1 (ENSGACG00000013215)	snrnp27 (ENSGACG00000013195)	add2 (ENSGACG00000013189)	figla (ENSGACG00000013186)	hk2 (ENSGACG00000013109)	NPFFR1 (ENSGACG00000013106)	tet3 (ENSGACG00000013100)	ap3m2 (ENSGACG00000013088)	kat6a (ENSGACG00000013076)	ENSGACG00000013075	sema4c (ENSGACG00000013062)	ENSGACG00000013061	tbx1 (ENSGACG00000013057) #22	gnb1l (ENSGACG00000013043)	TXNRD2 (ENSGACG00000013011) #24	arvcfb (ENSGACG00000013003) #26	tango2 (ENSGACG00000012977) #27	dgcr8 (ENSGACG00000012975) #28	trmt2a (ENSGACG00000012965) #29	ranbp1 (ENSGACG00000012952)	zdhhc8b (ENSGACG00000012949) #31	pgam5 (ENSGACG00000012945)	ankle2 (ENSGACG00000012934)	golga3 (ENSGACG00000012921)	ENSGACG00000012918	ENSGACG00000012916	chfr (ENSGACG00000012903)	FBRSL1 (ENSGACG00000012894)
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Channel bull blenny	MODERN SPECIES	23	ERLIN2 (ENSCGOG00000018995)	ENSCGOG00000019985	bmp10 (ENSCGOG00000019986)	arhgap25 (ENSCGOG00000020011)	cds2 (ENSCGOG00000020025)	figla (ENSCGOG00000020299)	hk2 (ENSCGOG00000020474)	NPFFR1 (ENSCGOG00000022958)	tet3 (ENSCGOG00000022963)	slc27a2a (ENSCGOG00000022965)	ap3m2 (ENSCGOG00000022971)	kat6a (ENSCGOG00000023064)	ENSCGOG00000023094	sema4c (ENSCGOG00000023102)	ENSCGOG00000023114	tbx1 (ENSCGOG00000000467) #22	gnb1l (ENSCGOG00000000504)	TXNRD2 (ENSCGOG00000000651) #24	arvcfb (ENSCGOG00000000941) #26	tango2 (ENSCGOG00000000981) #27	dgcr8 (ENSCGOG00000000994) #28	trmt2a (ENSCGOG00000001053) #29	ENSCGOG00000001166	ranbp1 (ENSCGOG00000001168)	zdhhc8b (ENSCGOG00000001170) #31	pgam5 (ENSCGOG00000001193)	ankle2 (ENSCGOG00000001198)	golga3 (ENSCGOG00000001330)	chfr (ENSCGOG00000001922)	FBRSL1 (ENSCGOG00000002237)	GALNT9 (ENSCGOG00000002291)
Pike perch	MODERN SPECIES	16	ENSSLUG00000018640	cds2 (ENSSLUG00000018129)	zgc:65851 (ENSSLUG00000018093)	ENSSLUG00000018088	snrnp27 (ENSSLUG00000018084)	add2 (ENSSLUG00000017985)	figla (ENSSLUG00000017949)	hk2 (ENSSLUG00000017408)	NPFFR1 (ENSSLUG00000017335)	ENSSLUG00000017333	tet3 (ENSSLUG00000017316)	ap3m2 (ENSSLUG00000017303)	kat6a (ENSSLUG00000017243)	ENSSLUG00000017207	sema4c (ENSSLUG00000017202)	tbx1 (ENSSLUG00000017169) #22	gnb1l (ENSSLUG00000017165)	TXNRD2 (ENSSLUG00000013348) #24	arvcfb (ENSSLUG00000012199) #26	tango2 (ENSSLUG00000012107) #27	dgcr8 (ENSSLUG00000012045) #28	ENSSLUG00000012031	trmt2a (ENSSLUG00000011813) #29	ranbp1 (ENSSLUG00000011763)	zdhhc8b (ENSSLUG00000011743) #31	pgam5 (ENSSLUG00000011737)	ankle2 (ENSSLUG00000011706)	golga3 (ENSSLUG00000010026)	chfr (ENSSLUG00000009933)	FBRSL1 (ENSSLUG00000009784)	GALNT9 (ENSSLUG00000009755)
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Gilthead seabream	MODERN SPECIES	19	cds2 (ENSSAUG00010022057)	zgc:65851 (ENSSAUG00010022068)	MXD1 (ENSSAUG00010022086)	snrnp27 (ENSSAUG00010022088)	DNAH2 (ENSSAUG00010022092)	add2 (ENSSAUG00010022105)	figla (ENSSAUG00010022186)	ENSSAUG00010022187	hk2 (ENSSAUG00010022222)	NPFFR1 (ENSSAUG00010024389)	tet3 (ENSSAUG00010024407)	ap3m2 (ENSSAUG00010024412)	kat6a (ENSSAUG00010024422)	ENSSAUG00010024604	sema4c (ENSSAUG00010024607)	tbx1 (ENSSAUG00010024608) #22	gnb1l (ENSSAUG00010024609)	TXNRD2 (ENSSAUG00010024660) #24	arvcfb (ENSSAUG00010025641) #26	tango2 (ENSSAUG00010025647) #27	dgcr8 (ENSSAUG00010025648) #28	trmt2a (ENSSAUG00010025657) #29	ranbp1 (ENSSAUG00010025680)	zdhhc8b (ENSSAUG00010000212) #31	pgam5 (ENSSAUG00010000236)	ankle2 (ENSSAUG00010000248)	golga3 (ENSSAUG00010000292)	chfr (ENSSAUG00010000327)	FBRSL1 (ENSSAUG00010000420)	GALNT9 (ENSSAUG00010000731)	atad1a (ENSSAUG00010000761)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
European seabass	MODERN SPECIES	13	ENSDLAG00005028068	bmp10 (ENSDLAG00005030781)	ENSDLAG00005006474	cds2 (ENSDLAG00005009665)	zgc:65851 (ENSDLAG00005006470)	add2 (ENSDLAG00005006286)	figla (ENSDLAG00005006251)	hk2 (ENSDLAG00005005866)	ENSDLAG00005005806	tet3 (ENSDLAG00005005747)	ap3m2 (ENSDLAG00005005711)	kat6a (ENSDLAG00005005194)	ENSDLAG00005005152	sema4c (ENSDLAG00005004938)	ENSDLAG00005027622	tbx1 (ENSDLAG00005004858) #22	gnb1l (ENSDLAG00005004852)	TXNRD2 (ENSDLAG00005022229) #24	ARVCF (ENSDLAG00005022042) #26	TANGO2 (ENSDLAG00005022032) #27	DGCR8 (ENSDLAG00005021935) #28	TRMT2A (ENSDLAG00005021563) #29	ENSDLAG00005034691	ENSDLAG00005021488 #31	pgam5 (ENSDLAG00005030822)	ANKLE2 (ENSDLAG00005021392)	golga3 (ENSDLAG00005020305)	chfr (ENSDLAG00005020052)	ENSDLAG00005019385	ENSDLAG00005019371	ENSDLAG00005019345
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005019101	TOP3B (ENSLCRG00005019001)	UNC5D (ENSLCRG00005018508)	hdr (ENSLCRG00005018500)	cyb561a3a (ENSLCRG00005018497)	loxl2b (ENSLCRG00005017475)	ENSLCRG00005017466	GOLGA7 (ENSLCRG00005017465)	sfrp1a (ENSLCRG00005017464)	ENSLCRG00005017463	tet3 (ENSLCRG00005017462)	ap3m2 (ENSLCRG00005017460)	kat6a (ENSLCRG00005017423)	ENSLCRG00005017416	sema4c (ENSLCRG00005017406)	tbx1 (ENSLCRG00005017402) #22	gnb1l (ENSLCRG00005017398)	TXNRD2 (ENSLCRG00005016744) #24	arvcfb (ENSLCRG00005016719) #26	tango2 (ENSLCRG00005016714) #27	dgcr8 (ENSLCRG00005016704) #28	trmt2a (ENSLCRG00005016296) #29	ranbp1 (ENSLCRG00005016280)	zdhhc8b (ENSLCRG00005016247) #31	ENSLCRG00005016244	pgam5 (ENSLCRG00005016242)	ankle2 (ENSLCRG00005016149)	ENSLCRG00005014894	chfr (ENSLCRG00005014864)	ENSLCRG00005014863	FBRSL1 (ENSLCRG00005014685)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Tongue sole	MODERN SPECIES	398	ENSCSEG00000012048	f2r (ENSCSEG00000012046)	iqgap2 (ENSCSEG00000011933)	sv2ca (ENSCSEG00000011905)	ENSCSEG00000011897	ANKDD1B (ENSCSEG00000011882)	POLK (ENSCSEG00000011846)	ENSCSEG00000011839	cert1a (ENSCSEG00000011782)	pip5k1bb (ENSCSEG00000011758)	ENSCSEG00000011752	ENSCSEG00000011745	ENSCSEG00000011733	ENSCSEG00000011724	sema4c (ENSCSEG00000011709)	tbx1 (ENSCSEG00000011695) #22	gnb1l (ENSCSEG00000011681)	arvcfb (ENSCSEG00000011663) #26	TXNRD2 (ENSCSEG00000011607) #24	tango2 (ENSCSEG00000011655) #27	ranbp1 (ENSCSEG00000011592)	ENSCSEG00000011587	trmt2a (ENSCSEG00000011557) #29	dgcr8 (ENSCSEG00000011546) #28	zdhhc8b (ENSCSEG00000011480) #31	pgam5 (ENSCSEG00000011471)	ankle2 (ENSCSEG00000011458)	ENSCSEG00000011453	golga3 (ENSCSEG00000011402)	ENSCSEG00000011384	ENSCSEG00000011380
Turbot	MODERN SPECIES	21	ENSSMAG00000020120	bmp10 (ENSSMAG00000020110)	ENSSMAG00000020091	cds2 (ENSSMAG00000020076)	zgc:65851 (ENSSMAG00000020070)	ENSSMAG00000020061	snrnp27 (ENSSMAG00000020051)	add2 (ENSSMAG00000020030)	figla (ENSSMAG00000020025)	hk2 (ENSSMAG00000020019)	ENSSMAG00000020014	tet3 (ENSSMAG00000020007)	ap3m2 (ENSSMAG00000019997)	ENSSMAG00000019962	sema4c (ENSSMAG00000019947)	tbx1 (ENSSMAG00000019942) #22	gnb1l (ENSSMAG00000019937)	TXNRD2 (ENSSMAG00000019894) #24	ARVCF (ENSSMAG00000019752) #26	TANGO2 (ENSSMAG00000019725) #27	DGCR8 (ENSSMAG00000019677) #28	ENSSMAG00000019674	TRMT2A (ENSSMAG00000019650) #29	ENSSMAG00000019631	ENSSMAG00000019599 #31	ENSSMAG00000019597	pgam5 (ENSSMAG00000019576)	ANKLE2 (ENSSMAG00000019562)	golga3 (ENSSMAG00000019507)	ENSSMAG00000025006	chfr (ENSSMAG00000019467)
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Barramundi perch	MODERN SPECIES	95	zgc:65851 (ENSLCAG00010016356)	MXD1 (ENSLCAG00010016360)	snrnp27 (ENSLCAG00010016371)	add2 (ENSLCAG00010016404)	figla (ENSLCAG00010016455)	hk2 (ENSLCAG00010016823)	ENSLCAG00010018231	ENSLCAG00010018236	tet3 (ENSLCAG00010018240)	ENSLCAG00010018244	ENSLCAG00010018247	ap3m2 (ENSLCAG00010018251)	kat6a (ENSLCAG00010018266)	ENSLCAG00010018288	sema4c (ENSLCAG00010018293)	tbx1 (ENSLCAG00010018303) #22	gnb1l (ENSLCAG00010018315)	TXNRD2 (ENSLCAG00010018356) #24	arvcfb (ENSLCAG00010018513) #26	tango2 (ENSLCAG00010018562) #27	dgcr8 (ENSLCAG00010018584) #28	trmt2a (ENSLCAG00010018644) #29	ENSLCAG00010018691	ranbp1 (ENSLCAG00010018694)	zdhhc8b (ENSLCAG00010018707) #31	pgam5 (ENSLCAG00010018726)	ankle2 (ENSLCAG00010018736)	golga3 (ENSLCAG00010018801)	chfr (ENSLCAG00010018967)	FBRSL1 (ENSLCAG00010018977)	GALNT9 (ENSLCAG00010019002)
Seriola	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Greater amberjack	MODERN SPECIES	6	cds2 (ENSSDUG00000003275)	zgc:65851 (ENSSDUG00000003252)	MXD1 (ENSSDUG00000003240)	snrnp27 (ENSSDUG00000003229)	add2 (ENSSDUG00000003212)	figla (ENSSDUG00000003146)	hk2 (ENSSDUG00000003114)	NPFFR1 (ENSSDUG00000003101)	tet3 (ENSSDUG00000003017)	ENSSDUG00000002991	ap3m2 (ENSSDUG00000002955)	kat6a (ENSSDUG00000002931)	ENSSDUG00000002906	sema4c (ENSSDUG00000002884)	ENSSDUG00000002870	tbx1 (ENSSDUG00000002853) #22	gnb1l (ENSSDUG00000002833)	TXNRD2 (ENSSDUG00000002755) #24	arvcfb (ENSSDUG00000002610) #26	tango2 (ENSSDUG00000002545) #27	dgcr8 (ENSSDUG00000002478) #28	trmt2a (ENSSDUG00000002436) #29	ENSSDUG00000002427	ranbp1 (ENSSDUG00000002380)	zdhhc8b (ENSSDUG00000002363) #31	pgam5 (ENSSDUG00000002342)	ankle2 (ENSSDUG00000002333)	golga3 (ENSSDUG00000002272)	chfr (ENSSDUG00000002210)	FBRSL1 (ENSSDUG00000002083)	GALNT9 (ENSSDUG00000002014)
Yellowtail amberjack	MODERN SPECIES	3287	arhgap25 (ENSSLDG00000014727)	cds2 (ENSSLDG00000014746)	zgc:65851 (ENSSLDG00000014769)	MXD1 (ENSSLDG00000014776)	snrnp27 (ENSSLDG00000014795)	add2 (ENSSLDG00000014818)	figla (ENSSLDG00000014859)	hk2 (ENSSLDG00000014876)	NPFFR1 (ENSSLDG00000014898)	tet3 (ENSSLDG00000014918)	ENSSLDG00000014940	ap3m2 (ENSSLDG00000014958)	kat6a (ENSSLDG00000014992)	ENSSLDG00000015026	sema4c (ENSSLDG00000015061)	tbx1 (ENSSLDG00000015134) #22	gnb1l (ENSSLDG00000015148)	TXNRD2 (ENSSLDG00000015221) #24	arvcfb (ENSSLDG00000015526) #26	tango2 (ENSSLDG00000015740) #27	dgcr8 (ENSSLDG00000015762) #28	trmt2a (ENSSLDG00000015826) #29	ENSSLDG00000015853	ranbp1 (ENSSLDG00000015871)	zdhhc8b (ENSSLDG00000015939) #31	pgam5 (ENSSLDG00000015980)	ankle2 (ENSSLDG00000016012)	golga3 (ENSSLDG00000016056)	chfr (ENSSLDG00000016110)	FBRSL1 (ENSSLDG00000016149)
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Zig-zag eel	MODERN SPECIES	23	cds2 (ENSMAMG00000020602)	zgc:65851 (ENSMAMG00000020614)	ENSMAMG00000020618	snrnp27 (ENSMAMG00000020624)	add2 (ENSMAMG00000020629)	figla (ENSMAMG00000020638)	hk2 (ENSMAMG00000020698)	ENSMAMG00000020717	ENSMAMG00000020724	ap3m2 (ENSMAMG00000020732)	kat6a (ENSMAMG00000020746)	ENSMAMG00000020751	sema4c (ENSMAMG00000020765)	ENSMAMG00000024484	ENSMAMG00000004090	tbx1 (ENSMAMG00000020778) #22	gnb1l (ENSMAMG00000026626)	TXNRD2 (ENSMAMG00000020807) #24	ARVCF (ENSMAMG00000020827) #26	TANGO2 (ENSMAMG00000020841) #27	DGCR8 (ENSMAMG00000020856) #28	TRMT2A (ENSMAMG00000020881) #29	ENSMAMG00000020892	ENSMAMG00000025825	ENSMAMG00000020901 #31	pgam5 (ENSMAMG00000020904)	ANKLE2 (ENSMAMG00000020909)	golga3 (ENSMAMG00000020913)	chfr (ENSMAMG00000020932)	ENSMAMG00000020939	ENSMAMG00000000314
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Siamese fighting fish	MODERN SPECIES	20	arhgap25 (ENSBSLG00000009911)	cds2 (ENSBSLG00000009967)	zgc:65851 (ENSBSLG00000010227)	MXD1 (ENSBSLG00000010233)	snrnp27 (ENSBSLG00000010236)	add2 (ENSBSLG00000010766)	figla (ENSBSLG00000011286)	hk2 (ENSBSLG00000011402)	NPFFR1 (ENSBSLG00000015160)	ENSBSLG00000015197	tet3 (ENSBSLG00000015219)	ap3m2 (ENSBSLG00000015319)	kat6a (ENSBSLG00000015408)	ENSBSLG00000016598	sema4c (ENSBSLG00000016693)	tbx1 (ENSBSLG00000016878) #22	gnb1l (ENSBSLG00000016989)	TXNRD2 (ENSBSLG00000017108) #24	arvcfb (ENSBSLG00000018278) #26	tango2 (ENSBSLG00000019175) #27	dgcr8 (ENSBSLG00000019227) #28	trmt2a (ENSBSLG00000019325) #29	ENSBSLG00000019609	ranbp1 (ENSBSLG00000019767)	zdhhc8b (ENSBSLG00000019816) #31	pgam5 (ENSBSLG00000019871)	ENSBSLG00000019893	ankle2 (ENSBSLG00000019915)	golga3 (ENSBSLG00000020002)	chfr (ENSBSLG00000020549)	FBRSL1 (ENSBSLG00000020569)
Climbing perch	MODERN SPECIES	22	ENSATEG00000014647	cds2 (ENSATEG00000014657)	zgc:65851 (ENSATEG00000014687)	ENSATEG00000028566	snrnp27 (ENSATEG00000014733)	add2 (ENSATEG00000014740)	figla (ENSATEG00000014775)	hk2 (ENSATEG00000014796)	ENSATEG00000014836	tet3 (ENSATEG00000014855)	ENSATEG00000014883	ap3m2 (ENSATEG00000014899)	kat6a (ENSATEG00000014921)	ENSATEG00000015008	sema4c (ENSATEG00000015035)	tbx1 (ENSATEG00000015097) #22	gnb1l (ENSATEG00000028028)	TXNRD2 (ENSATEG00000015134) #24	ARVCF (ENSATEG00000015225) #26	TANGO2 (ENSATEG00000015387) #27	ENSATEG00000015421	DGCR8 (ENSATEG00000015435) #28	TRMT2A (ENSATEG00000015492) #29	ENSATEG00000026138	ENSATEG00000015567	ENSATEG00000015610 #31	ENSATEG00000015812	pgam5 (ENSATEG00000015826)	ANKLE2 (ENSATEG00000015849)	golga3 (ENSATEG00000015900)	chfr (ENSATEG00000015922)
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.e.a
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f
Amphiprion	ANCESTRAL SPECIES	18	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f
Clown anemonefish	MODERN SPECIES	1000																tbx1 (ENSAOCG00000009064) #22	gnb1l (ENSAOCG00000000557)	TXNRD2 (ENSAOCG00000009134) #24	arvcfb (ENSAOCG00000009333) #26	tango2 (ENSAOCG00000009385) #27	dgcr8 (ENSAOCG00000009444) #28	trmt2a (ENSAOCG00000009497) #29	ranbp1 (ENSAOCG00000009542)	zdhhc8b (ENSAOCG00000009558) #31	pgam5 (ENSAOCG00000002007)	ankle2 (ENSAOCG00000009612)	golga3 (ENSAOCG00000009722)	chfr (ENSAOCG00000009754)	ENSAOCG00000009797	GALNT9 (ENSAOCG00000009830)	atad1a (ENSAOCG00000009872)
Orange clownfish	MODERN SPECIES	19	bmp10 (ENSAPEG00000002643)	arhgap25 (ENSAPEG00000002676)	cds2 (ENSAPEG00000002692)	zgc:65851 (ENSAPEG00000002722)	MXD1 (ENSAPEG00000002731)	snrnp27 (ENSAPEG00000002742)	add2 (ENSAPEG00000002806)	figla (ENSAPEG00000002822)	hk2 (ENSAPEG00000003103)	ENSAPEG00000004052	tet3 (ENSAPEG00000004084)	ap3m2 (ENSAPEG00000004128)	kat6a (ENSAPEG00000004193)	ENSAPEG00000004300	sema4c (ENSAPEG00000004359)	tbx1 (ENSAPEG00000004378) #22	gnb1l (ENSAPEG00000004526)	TXNRD2 (ENSAPEG00000004544) #24	arvcfb (ENSAPEG00000004767) #26	tango2 (ENSAPEG00000004865) #27	dgcr8 (ENSAPEG00000004916) #28	trmt2a (ENSAPEG00000005005) #29	ENSAPEG00000005058	ranbp1 (ENSAPEG00000005067)	zdhhc8b (ENSAPEG00000005113) #31	pgam5 (ENSAPEG00000005122)	ankle2 (ENSAPEG00000005145)	golga3 (ENSAPEG00000005160)	chfr (ENSAPEG00000005284)	FBRSL1 (ENSAPEG00000005314)	GALNT9 (ENSAPEG00000005360)
Spiny chromis	MODERN SPECIES	80															ENSAPOG00000016324	tbx1 (ENSAPOG00000016283) #22	gnb1l (ENSAPOG00000016251)	TXNRD2 (ENSAPOG00000016233) #24	arvcfb (ENSAPOG00000016165) #26	tango2 (ENSAPOG00000016054) #27	dgcr8 (ENSAPOG00000016017) #28	ENSAPOG00000016003	LYPD1 (ENSAPOG00000015983)	ENSAPOG00000015980	gpr39 (ENSAPOG00000015964)	SLC35F5 (ENSAPOG00000001049)	SYMPK (ENSAPOG00000015934)	zgc:136439 (ENSAPOG00000015825)	asnsd1 (ENSAPOG00000015780)	ENSAPOG00000015761	slc40a1 (ENSAPOG00000000983)
Bicolor damselfish	MODERN SPECIES	262						figla (ENSSPAG00000010206)	ENSSPAG00000010197	hk2 (ENSSPAG00000010175)	ENSSPAG00000010164	tet3 (ENSSPAG00000010151)	ap3m2 (ENSSPAG00000010119)	kat6a (ENSSPAG00000010055)	ENSSPAG00000010016	ENSSPAG00000010004	sema4c (ENSSPAG00000009967)	tbx1 (ENSSPAG00000009939) #22	gnb1l (ENSSPAG00000009914)	TXNRD2 (ENSSPAG00000009857) #24	arvcfb (ENSSPAG00000009777) #26	ENSSPAG00000009760 #26	tango2 (ENSSPAG00000009731) #27	dgcr8 (ENSSPAG00000009666) #28	ENSSPAG00000009658	trmt2a (ENSSPAG00000009633) #29	ranbp1 (ENSSPAG00000009597)	zdhhc8b (ENSSPAG00000009574) #31	pgam5 (ENSSPAG00000009558)	ankle2 (ENSSPAG00000009543)	golga3 (ENSSPAG00000009477)	chfr (ENSSPAG00000009447)
Cichlidae	ANCESTRAL SPECIES	29	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Pseudocrenilabrinae	ANCESTRAL SPECIES	26	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a.p	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	28	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a.p	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Haplochromini	ANCESTRAL SPECIES	30	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Haplochromini_A	ANCESTRAL SPECIES	32	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
P. nyererei	MODERN SPECIES	498										ENSPNYG00000014034	tet3 (ENSPNYG00000013997)	ap3m2 (ENSPNYG00000013968)	kat6a (ENSPNYG00000013903)	ENSPNYG00000013868	sema4c (ENSPNYG00000013816)	tbx1 (ENSPNYG00000013789) #22	gnb1l (ENSPNYG00000013775)	TXNRD2 (ENSPNYG00000013735) #24	arvcfb (ENSPNYG00000013290) #26	tango2 (ENSPNYG00000013153) #27
Haplochromini_B	ANCESTRAL SPECIES	44	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Zebra mbuna	MODERN SPECIES	1094	bmp10 (ENSMZEG00005001718)	arhgap25 (ENSMZEG00005001711)	cds2 (ENSMZEG00005001656)	zgc:65851 (ENSMZEG00005001648)	MXD1 (ENSMZEG00005001624)	snrnp27 (ENSMZEG00005001618)	add2 (ENSMZEG00005001590)	figla (ENSMZEG00005001561)	hk2 (ENSMZEG00005001539)	NPFFR1 (ENSMZEG00005001294)	tet3 (ENSMZEG00005001257)	ap3m2 (ENSMZEG00005001226)	kat6a (ENSMZEG00005001157)	ENSMZEG00005001142	sema4c (ENSMZEG00005001105)	tbx1 (ENSMZEG00005001071) #22	gnb1l (ENSMZEG00005001037)	TXNRD2 (ENSMZEG00005001021) #24	arvcfb (ENSMZEG00005000889) #26	ggt5a (ENSMZEG00005000826)	ENSMZEG00005000809	tango2 (ENSMZEG00005000784) #27	KLHL10 (ENSMZEG00005000777)	lhb (ENSMZEG00005000770)	ggt5a (ENSMZEG00005000655)	asphd2 (ENSMZEG00005000624)	cabp1a (ENSMZEG00005000581)	mlec (ENSMZEG00005000567)	ENSMZEG00005000552	hps4 (ENSMZEG00005000544)	cox6a1 (ENSMZEG00005000519)
Eastern happy	MODERN SPECIES	3	add2 (ENSACLG00000002869)	figla (ENSACLG00000002890)	hk2 (ENSACLG00000002920)	NPFFR1 (ENSACLG00000003160)	ENSACLG00000003249	tet3 (ENSACLG00000003273)	ap3m2 (ENSACLG00000003300)	kat6a (ENSACLG00000003938)	ENSACLG00000003998	sema4c (ENSACLG00000004017)	ENSACLG00000004053	ENSACLG00000004062	ENSACLG00000004070	ENSACLG00000004073	ENSACLG00000004082	tbx1 (ENSACLG00000004096) #22	gnb1l (ENSACLG00000004121)	TXNRD2 (ENSACLG00000004146) #24	arvcfb (ENSACLG00000004219) #26	tango2 (ENSACLG00000004403) #27	ENSACLG00000004425	ENSACLG00000004430	UNC5D (ENSACLG00000004465)	hdr (ENSACLG00000004595)	cyb561a3a (ENSACLG00000004625)	loxl2b (ENSACLG00000004817)	GOLGA7 (ENSACLG00000004827)	sfrp1a (ENSACLG00000004845)	ZMAT4 (ENSACLG00000005038)	tcima (ENSACLG00000005067)	adam28 (ENSACLG00000005291)
Burton s mouthbrooder	MODERN SPECIES	482											tet3 (ENSHBUG00000007486)	ap3m2 (ENSHBUG00000007540)	kat6a (ENSHBUG00000007593)	ENSHBUG00000007600	sema4c (ENSHBUG00000007613)	tbx1 (ENSHBUG00000007639) #22	gnb1l (ENSHBUG00000007651)	TXNRD2 (ENSHBUG00000007777) #24	arvcfb (ENSHBUG00000007839) #26	tango2 (ENSHBUG00000007916) #27
Lyretail cichlid	MODERN SPECIES	533																tbx1 (ENSNBRG00000012281) #22	gnb1l (ENSNBRG00000012318)	TXNRD2 (ENSNBRG00000012402) #24	arvcfb (ENSNBRG00000012753) #26	tango2 (ENSNBRG00000013556) #27
Nile tilapia	MODERN SPECIES	3	add2 (ENSONIG00000015858)	figla (ENSONIG00000015856)	ENSONIG00000039993	ENSONIG00000002149	hk2 (ENSONIG00000015846)	NPFFR1 (ENSONIG00000015845)	ENSONIG00000042081	tet3 (ENSONIG00000015843)	ENSONIG00000038202	ap3m2 (ENSONIG00000015840)	kat6a (ENSONIG00000015837)	ENSONIG00000015835	sema4c (ENSONIG00000015832)	ENSONIG00000030801	ENSONIG00000033082	tbx1 (ENSONIG00000039158) #22	gnb1l (ENSONIG00000028885)	TXNRD2 (ENSONIG00000015820) #24	arvcfb (ENSONIG00000015812) #26	ENSONIG00000031171	ENSONIG00000037751	ENSONIG00000029391	tango2 (ENSONIG00000015809) #27	ENSONIG00000040269	ENSONIG00000034944	ENSONIG00000029999	ggt5a (ENSONIG00000033718)	ENSONIG00000029671	asphd2 (ENSONIG00000011220)	cabp1a (ENSONIG00000034969)	ENSONIG00000030083
Midas cichlid	MODERN SPECIES	438											tet3 (ENSACIG00000009921)	ap3m2 (ENSACIG00000009903)	kat6a (ENSACIG00000009860)	ENSACIG00000009836	sema4c (ENSACIG00000009763)	tbx1 (ENSACIG00000009738) #22	gnb1l (ENSACIG00000009690)	TXNRD2 (ENSACIG00000009370) #24	arvcfb (ENSACIG00000009303) #26	plod3 (ENSACIG00000009256)	cyb5d1 (ENSACIG00000009225)	ENSACIG00000009211	ENSACIG00000009201
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT01020000230579.C.b.b.a.a.a	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00980000199539	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Chinese medaka	MODERN SPECIES	441																tbx1 (ENSOSIG00000006669) #22	gnb1l (ENSOSIG00000006672)	TXNRD2 (ENSOSIG00000006674) #24	arvcfb (ENSOSIG00000006779) #26	ENSOSIG00000006816	ENSOSIG00000006817	tango2 (ENSOSIG00000006818) #27	dgcr8 (ENSOSIG00000006823) #28	trmt2a (ENSOSIG00000006840) #29	ENSOSIG00000007088	ranbp1 (ENSOSIG00000007089)	zdhhc8b (ENSOSIG00000007137) #31	pgam5 (ENSOSIG00000007179)	ankle2 (ENSOSIG00000007182)	golga3 (ENSOSIG00000007210)	chfr (ENSOSIG00000008870)
Japanese Medaka HdrR	MODERN SPECIES	23	MXD1 (ENSORLG00000026050)	snrnp27 (ENSORLG00000015459)	add2 (ENSORLG00000030229)	figla (ENSORLG00000015451)	hk2 (ENSORLG00000015439)	ENSORLG00000022826	ENSORLG00000023844	ENSORLG00000015368	ENSORLG00000027729	tet3 (ENSORLG00000027616)	ap3m2 (ENSORLG00000015340)	kat6a (ENSORLG00000015313)	ENSORLG00000026010	sema4c (ENSORLG00000015302)	ENSORLG00000023431	tbx1 (ENSORLG00000015256) #22	gnb1l (ENSORLG00000015242)	TXNRD2 (ENSORLG00000015222) #24	ENSORLG00000026992	arvcfb (ENSORLG00000015210) #26	tango2 (ENSORLG00000015185) #27	dgcr8 (ENSORLG00000015160) #28	ENSORLG00000029201	trmt2a (ENSORLG00000015143) #29	ranbp1 (ENSORLG00000021996)	ENSORLG00000026272	zdhhc8b (ENSORLG00000015107) #31	ENSORLG00000025747	pgam5 (ENSORLG00000015061)	ankle2 (ENSORLG00000015038)	golga3 (ENSORLG00000015012)
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Javanese ricefish	MODERN SPECIES	23	bmp10 (ENSOJAG00000006304)	arhgap25 (ENSOJAG00000006268)	cds2 (ENSOJAG00000005951)	zgc:65851 (ENSOJAG00000005865)	MXD1 (ENSOJAG00000005848)	snrnp27 (ENSOJAG00000005816)	add2 (ENSOJAG00000024028)	figla (ENSOJAG00000024016)	hk2 (ENSOJAG00000023897)	NPFFR1 (ENSOJAG00000023852)	tet3 (ENSOJAG00000023848)	ap3m2 (ENSOJAG00000023844)	kat6a (ENSOJAG00000023842)	sema4c (ENSOJAG00000023835)	ENSOJAG00000023829	tbx1 (ENSOJAG00000023828) #22	gnb1l (ENSOJAG00000023826)	TXNRD2 (ENSOJAG00000023761) #24	arvcfb (ENSOJAG00000023724) #26	tango2 (ENSOJAG00000023716) #27	dgcr8 (ENSOJAG00000023713) #28	ENSOJAG00000023712	trmt2a (ENSOJAG00000023704) #29	ranbp1 (ENSOJAG00000023696)	zdhhc8b (ENSOJAG00000023689) #31	pgam5 (ENSOJAG00000023684)	ankle2 (ENSOJAG00000023682)	golga3 (ENSOJAG00000023647)	chfr (ENSOJAG00000023626)	ENSOJAG00000023616	ENSOJAG00000023596
Indian medaka	MODERN SPECIES	11	snrnp27 (ENSOMEG00000020477)	add2 (ENSOMEG00000020441)	figla (ENSOMEG00000020352)	ENSOMEG00000020314	ENSOMEG00000020305	hk2 (ENSOMEG00000020282)	NPFFR1 (ENSOMEG00000020203)	ENSOMEG00000020185	kcnk5a (ENSOMEG00000020170)	tet3 (ENSOMEG00000020122)	ap3m2 (ENSOMEG00000020004)	kat6a (ENSOMEG00000019969)	ENSOMEG00000019955	sema4c (ENSOMEG00000019914)	ENSOMEG00000019830	tbx1 (ENSOMEG00000019809) #22	gnb1l (ENSOMEG00000019769)	TXNRD2 (ENSOMEG00000019734) #24	arvcfb (ENSOMEG00000019562) #26	ENSOMEG00000019271	tango2 (ENSOMEG00000019244) #27	dgcr8 (ENSOMEG00000019137) #28	trmt2a (ENSOMEG00000019101) #29	ENSOMEG00000019081	ranbp1 (ENSOMEG00000019068)	zdhhc8b (ENSOMEG00000019020) #31	pgam5 (ENSOMEG00000019004)	ankle2 (ENSOMEG00000018985)	golga3 (ENSOMEG00000018936)	chfr (ENSOMEG00000018886)	FBRSL1 (ENSOMEG00000018810)
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Aplocheiloidei	ANCESTRAL SPECIES	20	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Turquoise killifish	MODERN SPECIES	1627	ENSNFUG00015024221	ERLIN2 (ENSNFUG00015024226)	ADD2 (ENSNFUG00015024247)	figla (ENSNFUG00015024259)	ENSNFUG00015024267	ENSNFUG00015024271	tet3 (ENSNFUG00015024278)	AP3M2 (ENSNFUG00015024299)	kat6a (ENSNFUG00015024318)	ENSNFUG00015024445	CDCA2 (ENSNFUG00015024447)	sema4c (ENSNFUG00015024450)	ENSNFUG00015024452	ENSNFUG00015024454	ENSNFUG00015024456	tbx1 (ENSNFUG00015005263) #22	GNB1L (ENSNFUG00015005288)	TXNRD2 (ENSNFUG00015005393) #24	ARVCFB (ENSNFUG00015005792) #26	tango2 (ENSNFUG00015005924) #27	DGCR8 (ENSNFUG00015005964) #28	trmt2a (ENSNFUG00015006052) #29	ranbp1 (ENSNFUG00015006202)	ZDHHC8B (ENSNFUG00015006222) #31	ENSNFUG00015006252	PGAM5 (ENSNFUG00015006260)	ANKLE2 (ENSNFUG00015006277)	golga3 (ENSNFUG00015006369)	chfr (ENSNFUG00015007062)	FBRSL1 (ENSNFUG00015007151)	ENSNFUG00015007260
Mangrove rivulus	MODERN SPECIES	30	zgc:65851 (ENSKMAG00000008283)	cds2 (ENSKMAG00000008314)	arhgap25 (ENSKMAG00000008391)	bmp10 (ENSKMAG00000008412)	ENSKMAG00000008432	ERLIN2 (ENSKMAG00000008450)	add2 (ENSKMAG00000008526)	figla (ENSKMAG00000008566)	hk2 (ENSKMAG00000008651)	NPFFR1 (ENSKMAG00000008673)	tet3 (ENSKMAG00000008703)	ap3m2 (ENSKMAG00000008725)	kat6a (ENSKMAG00000008766)	ENSKMAG00000008828	sema4c (ENSKMAG00000008852)	tbx1 (ENSKMAG00000008886) #22	gnb1l (ENSKMAG00000008921)	TXNRD2 (ENSKMAG00000008940) #24	arvcfb (ENSKMAG00000009005) #26	tango2 (ENSKMAG00000009062) #27	dgcr8 (ENSKMAG00000009087) #28	trmt2a (ENSKMAG00000009161) #29	ENSKMAG00000009210	ranbp1 (ENSKMAG00000009217)	zdhhc8b (ENSKMAG00000009250) #31	ENSKMAG00000009272	pgam5 (ENSKMAG00000009287)	ankle2 (ENSKMAG00000009309)	golga3 (ENSKMAG00000009360)	chfr (ENSKMAG00000009479)	FBRSL1 (ENSKMAG00000009499)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C.p	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Platyfish	MODERN SPECIES	3	ENSXMAG00000010467	loxl2b (ENSXMAG00000010470)	cyb561a3a (ENSXMAG00000010489)	hdr (ENSXMAG00000010490)	ENSXMAG00000023255	UNC5D (ENSXMAG00000010494)	ENSXMAG00000028799	tm2d2 (ENSXMAG00000010513)	ENSXMAG00000021702	ENSXMAG00000021698	lman2lb (ENSXMAG00000024814)	ENSXMAG00000026852	kat6a (ENSXMAG00000010515)	ENSXMAG00000022670	sema4c (ENSXMAG00000002351)	tbx1 (ENSXMAG00000002370) #22	gnb1l (ENSXMAG00000002374)	TXNRD2 (ENSXMAG00000002378) #24	arvcfb (ENSXMAG00000002404) #26	tango2 (ENSXMAG00000002411) #27	dgcr8 (ENSXMAG00000002426) #28	ENSXMAG00000022575	trmt2a (ENSXMAG00000002434) #29	ranbp1 (ENSXMAG00000002443)	zdhhc8b (ENSXMAG00000002450) #31	pgam5 (ENSXMAG00000002459)	ankle2 (ENSXMAG00000002465)	golga3 (ENSXMAG00000002470)	chfr (ENSXMAG00000002473)	FBRSL1 (ENSXMAG00000022481)	ENSXMAG00000024472
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C.p.b	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Guppy	MODERN SPECIES	461	ENSPREG00000017571	bmp10 (ENSPREG00000017589)	ENSPREG00000017612	ERLIN2 (ENSPREG00000017620)	add2 (ENSPREG00000017646)	figla (ENSPREG00000017683)	ENSPREG00000017715	ENSPREG00000017787	ENSPREG00000018383	ENSPREG00000018389	tet3 (ENSPREG00000018405)	ap3m2 (ENSPREG00000018421)	kat6a (ENSPREG00000018455)	ENSPREG00000018512	sema4c (ENSPREG00000018529)	tbx1 (ENSPREG00000018558) #22	gnb1l (ENSPREG00000018567)	TXNRD2 (ENSPREG00000018592) #24	arvcfb (ENSPREG00000018675) #26	tango2 (ENSPREG00000018846) #27	dgcr8 (ENSPREG00000018877) #28	trmt2a (ENSPREG00000018920) #29	ENSPREG00000018939	ranbp1 (ENSPREG00000018948)	zdhhc8b (ENSPREG00000019009) #31	pgam5 (ENSPREG00000019141)	ankle2 (ENSPREG00000019167)	golga3 (ENSPREG00000019188)	chfr (ENSPREG00000019246)	FBRSL1 (ENSPREG00000019349)	GALNT9 (ENSPREG00000019615)
NAME_6	ANCESTRAL SPECIES	9																ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Sailfin molly	MODERN SPECIES	1702																tbx1 (ENSPLAG00000016100) #22	ENSPLAG00000016079
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	333														tbx1 (ENSPFOG00000009540) #22	gnb1l (ENSPFOG00000009677)	tbx1 (ENSPFOG00000009621) #22	TXNRD2 (ENSPFOG00000009809) #24	arvcfb (ENSPFOG00000010166) #26	tango2 (ENSPFOG00000010604) #27	dgcr8 (ENSPFOG00000010796) #28	trmt2a (ENSPFOG00000010903) #29	ranbp1 (ENSPFOG00000011003)	zdhhc8b (ENSPFOG00000011059) #31	pgam5 (ENSPFOG00000011166)	ankle2 (ENSPFOG00000011216)	golga3 (ENSPFOG00000011295)	ENSPFOG00000011465	chfr (ENSPFOG00000011481)	FBRSL1 (ENSPFOG00000011627)	GALNT9 (ENSPFOG00000011780)	atad1a (ENSPFOG00000012028)
Amazon molly	MODERN SPECIES	333																tbx1 (ENSPFOG00000009540) #22	gnb1l (ENSPFOG00000009677)	tbx1 (ENSPFOG00000009621) #22	TXNRD2 (ENSPFOG00000009809) #24	arvcfb (ENSPFOG00000010166) #26	tango2 (ENSPFOG00000010604) #27	dgcr8 (ENSPFOG00000010796) #28	trmt2a (ENSPFOG00000010903) #29	ranbp1 (ENSPFOG00000011003)	zdhhc8b (ENSPFOG00000011059) #31	pgam5 (ENSPFOG00000011166)	ankle2 (ENSPFOG00000011216)	golga3 (ENSPFOG00000011295)	ENSPFOG00000011465	chfr (ENSPFOG00000011481)	FBRSL1 (ENSPFOG00000011627)
NAME_4	ANCESTRAL SPECIES	43	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Mummichog	MODERN SPECIES	236	arhgap25 (ENSFHEG00000006308)	ENSFHEG00000006318	ERLIN2 (ENSFHEG00000006359)	add2 (ENSFHEG00000006376)	figla (ENSFHEG00000006389)	hk2 (ENSFHEG00000006410)	ENSFHEG00000006426	ENSFHEG00000006440	ENSFHEG00000006558	tet3 (ENSFHEG00000006573)	ap3m2 (ENSFHEG00000006614)	kat6a (ENSFHEG00000006701)	ENSFHEG00000006726	sema4c (ENSFHEG00000006740)	ENSFHEG00000006754	tbx1 (ENSFHEG00000006790) #22	gnb1l (ENSFHEG00000006802)	TXNRD2 (ENSFHEG00000006885) #24	arvcfb (ENSFHEG00000006930) #26	tango2 (ENSFHEG00000006990) #27	dgcr8 (ENSFHEG00000007016) #28	ENSFHEG00000007024	trmt2a (ENSFHEG00000007062) #29	ranbp1 (ENSFHEG00000007072)	zdhhc8b (ENSFHEG00000007083) #31	pgam5 (ENSFHEG00000007095)	ankle2 (ENSFHEG00000007106)	golga3 (ENSFHEG00000007219)	chfr (ENSFHEG00000007241)	GAS8 (ENSFHEG00000007250)
Sheepshead minnow	MODERN SPECIES	385																tbx1 (ENSCVAG00000000889) #22	gnb1l (ENSCVAG00000008512)	TXNRD2 (ENSCVAG00000008543) #24	arvcfb (ENSCVAG00000008581) #26	tango2 (ENSCVAG00000008605) #27	dgcr8 (ENSCVAG00000008664) #28	trmt2a (ENSCVAG00000008685) #29	ENSCVAG00000008708	ranbp1 (ENSCVAG00000008727)	zdhhc8b (ENSCVAG00000008734) #31	pgam5 (ENSCVAG00000008773)	ankle2 (ENSCVAG00000008815)	golga3 (ENSCVAG00000008831)	chfr (ENSCVAG00000008839)	ENSCVAG00000008912	ENSCVAG00000008924
Cod	MODERN SPECIES	19	cmya5 (ENSGMOG00000010684)	mtx3 (ENSGMOG00000010669)	thbs4a (ENSGMOG00000010650)	serinc5 (ENSGMOG00000010632)	cdk7 (ENSGMOG00000010620)	ENSGMOG00000026056	add2 (ENSGMOG00000008103)	figla (ENSGMOG00000033185)	hk2 (ENSGMOG00000008089)	ENSGMOG00000022911	tet3 (ENSGMOG00000026685)	ap3m2 (ENSGMOG00000008074)	kat6a (ENSGMOG00000034583)	ENSGMOG00000029234	sema4c (ENSGMOG00000008050)	tbx1 (ENSGMOG00000018613) #22	gnb1l (ENSGMOG00000018602)	TXNRD2 (ENSGMOG00000018581) #24	ARVCF (ENSGMOG00000034656) #26	TANGO2 (ENSGMOG00000007735) #27	DGCR8 (ENSGMOG00000007715) #28	ENSGMOG00000023669	TRMT2A (ENSGMOG00000007707) #29	ENSGMOG00000007701	ENSGMOG00000007695 #31	pgam5 (ENSGMOG00000007688)	ANKLE2 (ENSGMOG00000007676)	golga3 (ENSGMOG00000007665)	chfr (ENSGMOG00000007630)	ENSGMOG00000034511	ENSGMOG00000007611
Protacanthopterygii	ANCESTRAL SPECIES	93	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832.k #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00900000141073 #30	ENSGT00940000154389.b	ENSGT00940000158044.a #31	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	37	ENSGT00940000167361.c	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606	ENSGT00940000158832.k.b #24	ENSGT00940000157027.n.a.c #26	ENSGT00390000012733.m #27	ENSGT00390000015977.f #28	ENSGT00530000063723.a.d #29	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #31	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606	ENSGT00940000158832.k.b #24	ENSGT00940000157027.n.a.c #26	ENSGT00390000012733.m #27	ENSGT00390000015977.f #28	ENSGT00530000063723.a.d #29	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #31	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Salmo	ANCESTRAL SPECIES		ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606	ENSGT00940000158832.k.b #24	ENSGT00940000157027.n.a.c #26	ENSGT00390000012733.m #27	ENSGT00390000015977.f #28	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #31	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a	ENSGT00950000183200.B.i
Atlantic salmon	MODERN SPECIES	16	ENSSSAG00000080206	ENSSSAG00000080234	ENSSSAG00000112711	ENSSSAG00000080241	zgc:65851 (ENSSSAG00000080297)	ENSSSAG00000085309	add2 (ENSSSAG00000080372)	hk2 (ENSSSAG00000080458)	ENSSSAG00000089549	tet3 (ENSSSAG00000080979)	ap3m2 (ENSSSAG00000115977)	kat6a (ENSSSAG00000080991)	ENSSSAG00000104191	sema4c (ENSSSAG00000081000)	gnb1l (ENSSSAG00000081005)	tbx1 (ENSSSAG00000081001) #22	ARVCF (ENSSSAG00000081080) #26	ENSSSAG00000114183	ENSSSAG00000086975	tango2 (ENSSSAG00000081113) #27	DGCR8 (ENSSSAG00000081127) #28	ENSSSAG00000110966	ranbp1 (ENSSSAG00000081173)	ENSSSAG00000081185 #31	pgam5 (ENSSSAG00000081207)	ANKLE2 (ENSSSAG00000095591)	golga3 (ENSSSAG00000081231)	ENSSSAG00000082369	chfr (ENSSSAG00000081316)	ENSSSAG00000081333	ENSSSAG00000081957
River trout	MODERN SPECIES	19	bmp10 (ENSSTUG00000021377)	arhgap25 (ENSSTUG00000021382)	cds2 (ENSSTUG00000021397)	zgc:65851 (ENSSTUG00000021451)	ENSSTUG00000021590	snrnp27 (ENSSTUG00000021597)	add2 (ENSSTUG00000021628)	hk2 (ENSSTUG00000021812)	NPFFR1 (ENSSTUG00000026378)	ENSSTUG00000026487	tet3 (ENSSTUG00000026499)	ap3m2 (ENSSTUG00000026573)	kat6a (ENSSTUG00000026597)	ENSSTUG00000026655	sema4c (ENSSTUG00000026676)	tbx1 (ENSSTUG00000026740) #22	gnb1l (ENSSTUG00000026763)	TXNRD2 (ENSSTUG00000026809) #24	arvcfb (ENSSTUG00000027951) #26	tango2 (ENSSTUG00000028113) #27	dgcr8 (ENSSTUG00000028218) #28	ranbp1 (ENSSTUG00000029154)	zdhhc8b (ENSSTUG00000029223) #31	pgam5 (ENSSTUG00000029253)	ankle2 (ENSSTUG00000029278)	golga3 (ENSSTUG00000029405)	chfr (ENSSTUG00000032136)	FBRSL1 (ENSSTUG00000032598)	ENSSTUG00000033029	ENSSTUG00000033056	ENSSTUG00000033059
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000167361.c	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606.e	ENSGT00940000158832.k.b #24	ENSGT00940000157027.n.a.c #26	ENSGT00390000012733.m #27	ENSGT00390000015977.f #28	ENSGT00530000063723.a.d #29	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #31	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606.e	ENSGT00940000158832.k.b #24	ENSGT00940000157027.n.a.c #26	ENSGT00390000012733.m #27	ENSGT00390000015977.f #28	ENSGT00530000063723.a.d #29	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #31	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Coho salmon	MODERN SPECIES	22	bmp10 (ENSOKIG00005001614)	arhgap25 (ENSOKIG00005001609)	cds2 (ENSOKIG00005001211)	zgc:65851 (ENSOKIG00005001093)	ENSOKIG00005001084	snrnp27 (ENSOKIG00005001078)	add2 (ENSOKIG00005001055)	hk2 (ENSOKIG00005000904)	NPFFR1 (ENSOKIG00005000848)	ENSOKIG00005000845	tet3 (ENSOKIG00005000827)	ap3m2 (ENSOKIG00005000812)	kat6a (ENSOKIG00005000763)	ENSOKIG00005000746	sema4c (ENSOKIG00005000732)	tbx1 (ENSOKIG00005000720) #22	gnb1l (ENSOKIG00005000714)	TXNRD2 (ENSOKIG00005000525) #24	arvcfb (ENSOKIG00005000352) #26	tango2 (ENSOKIG00005000296) #27	DGCR8 (ENSOKIG00005000220) #28	TRMT2A (ENSOKIG00005000130) #29	ENSOKIG00005000084	zdhhc8b (ENSOKIG00005000053) #31	pgam5 (ENSOKIG00005038263)	ANKLE2 (ENSOKIG00005038179)	golga3 (ENSOKIG00005035210)	chfr (ENSOKIG00005034849)	FBRSL1 (ENSOKIG00005034536)	GALNT9 (ENSOKIG00005034468)	ENSOKIG00005034465
Chinook salmon	MODERN SPECIES	28	ERLIN2 (ENSOTSG00005011931)	ENSOTSG00005011928	bmp10 (ENSOTSG00005011926)	arhgap25 (ENSOTSG00005011924)	cds2 (ENSOTSG00005011849)	zgc:65851 (ENSOTSG00005011657)	ENSOTSG00005011652	add2 (ENSOTSG00005011621)	hk2 (ENSOTSG00005007910)	NPFFR1 (ENSOTSG00005007811)	tet3 (ENSOTSG00005007794)	ap3m2 (ENSOTSG00005007772)	kat6a (ENSOTSG00005007627)	ENSOTSG00005007621	sema4c (ENSOTSG00005035224)	tbx1 (ENSOTSG00005035220) #22	gnb1l (ENSOTSG00005035217)	TXNRD2 (ENSOTSG00005034945) #24	arvcfb (ENSOTSG00005034910) #26	tango2 (ENSOTSG00005034901) #27	dgcr8 (ENSOTSG00005034681) #28	trmt2a (ENSOTSG00005034679) #29	ranbp1 (ENSOTSG00005034671)	zdhhc8b (ENSOTSG00005034670) #31	pgam5 (ENSOTSG00005034669)	ankle2 (ENSOTSG00005034668)	golga3 (ENSOTSG00005029042)	chfr (ENSOTSG00005028920)	FBRSL1 (ENSOTSG00005028915)	GALNT9 (ENSOTSG00005028911)	ENSOTSG00005028910
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000003232	cds2 (ENSOMYG00000003017)	zgc:65851 (ENSOMYG00000002902)	ENSOMYG00000002856	add2 (ENSOMYG00000002827)	hk2 (ENSOMYG00000002399)	ENSOMYG00000001572	ENSOMYG00000053575	ENSOMYG00000001553	ENSOMYG00000051283	tet3 (ENSOMYG00000001537)	ap3m2 (ENSOMYG00000001490)	kat6a (ENSOMYG00000001433)	ENSOMYG00000001373	sema4c (ENSOMYG00000001280)	tbx1 (ENSOMYG00000047748) #22	gnb1l (ENSOMYG00000047745)	TXNRD2 (ENSOMYG00000047721) #24	ARVCF (ENSOMYG00000047699) #26	TANGO2 (ENSOMYG00000047695) #27	DGCR8 (ENSOMYG00000047682) #28	TRMT2A (ENSOMYG00000047676) #29	ENSOMYG00000047674	ENSOMYG00000047672 #31	ENSOMYG00000052971	pgam5 (ENSOMYG00000047671)	ANKLE2 (ENSOMYG00000047668)	golga3 (ENSOMYG00000047633)	chfr (ENSOMYG00000047582)	ENSOMYG00000047581	ENSOMYG00000056871
Huchen	MODERN SPECIES	25																tbx1 (ENSHHUG00000024598) #22	gnb1l (ENSHHUG00000024591)	TXNRD2 (ENSHHUG00000024346) #24	arvcfb (ENSHHUG00000024259) #26	tango2 (ENSHHUG00000024197) #27	dgcr8 (ENSHHUG00000024181) #28	trmt2a (ENSHHUG00000024177) #29	ranbp1 (ENSHHUG00000024149)	zdhhc8b (ENSHHUG00000024136) #31	pgam5 (ENSHHUG00000024130)	ankle2 (ENSHHUG00000024097)	golga3 (ENSHHUG00000024031)	chfr (ENSHHUG00000023992)	ENSHHUG00000023988	ENSHHUG00000023983	ENSHHUG00000023981
Salmoninae	ANCESTRAL SPECIES	1129																ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #24	ENSGT00940000157027.n.a.d #26
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #24	ENSGT00940000157027.n.a.d #26	ENSGT00390000012733.n #27	ENSGT00390000015977.e #28	ENSGT00900000143393	ENSGT00530000063723.a.c #29	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #31	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d.a	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00390000018606.f	ENSGT00940000158832.k.a #24	ENSGT00940000157027.n.a.d #26	ENSGT00390000012733.n #27	ENSGT00390000015977.e #28	ENSGT00530000063723.a.c #29	ENSGT00900000143393	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #31	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d.a	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00390000018606.f	ENSGT00940000158832.k.a #24	ENSGT00940000157027.n.a.d #26	ENSGT00390000012733.n #27	ENSGT00390000015977.e #28	ENSGT00530000063723.a.c #29	ENSGT00900000143393	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #31	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Coho salmon	MODERN SPECIES	28	CDS2 (ENSOKIG00005006616)	zgc:65851 (ENSOKIG00005007615)	MXD1 (ENSOKIG00005007622)	snrnp27 (ENSOKIG00005007628)	add2 (ENSOKIG00005007650)	figla (ENSOKIG00005007699)	hk2 (ENSOKIG00005007724)	ENSOKIG00005008005	NPFFR1 (ENSOKIG00005008014)	tet3 (ENSOKIG00005008034)	ap3m2 (ENSOKIG00005008150)	kat6a (ENSOKIG00005008218)	ENSOKIG00005008642	sema4c (ENSOKIG00005008703)	ENSOKIG00005008816	tbx1 (ENSOKIG00005008829) #22	gnb1l (ENSOKIG00005008862)	TXNRD2 (ENSOKIG00005008890) #24	ARVCF (ENSOKIG00005009048) #26	ENSOKIG00005009213	TANGO2 (ENSOKIG00005009224) #27	dgcr8 (ENSOKIG00005009307) #28	trmt2a (ENSOKIG00005010127) #29	ENSOKIG00005011256	ranbp1 (ENSOKIG00005011262)	ZDHHC8 (ENSOKIG00005011304) #31	pgam5 (ENSOKIG00005011328)	ankle2 (ENSOKIG00005011340)	golga3 (ENSOKIG00005011755)	chfr (ENSOKIG00005015019)	FBRSL1 (ENSOKIG00005015412)
Chinook salmon	MODERN SPECIES	3	bmp10 (ENSOTSG00005045654)	arhgap25 (ENSOTSG00005045656)	cds2 (ENSOTSG00005045658)	zgc:65851 (ENSOTSG00005045707)	MXD1 (ENSOTSG00005045708)	ENSOTSG00005045710	add2 (ENSOTSG00005045711)	figla (ENSOTSG00005045712)	hk2 (ENSOTSG00005045715)	NPFFR1 (ENSOTSG00005045722)	tet3 (ENSOTSG00005045812)	ap3m2 (ENSOTSG00005045815)	kat6a (ENSOTSG00005045816)	ENSOTSG00005045817	sema4c (ENSOTSG00005045818)	tbx1 (ENSOTSG00005045821) #22	gnb1l (ENSOTSG00005045822)	TXNRD2 (ENSOTSG00005045824) #24	arvcfb (ENSOTSG00005045826) #26	tango2 (ENSOTSG00005045856) #27	dgcr8 (ENSOTSG00005045857) #28	trmt2a (ENSOTSG00005046128) #29	zdhhc8b (ENSOTSG00005046153) #31	pgam5 (ENSOTSG00005046158)	ankle2 (ENSOTSG00005046163)	golga3 (ENSOTSG00005046198)	chfr (ENSOTSG00005046721)	FBRSL1 (ENSOTSG00005046725)	GALNT9 (ENSOTSG00005046727)	atad1a (ENSOTSG00005046728)	ENSOTSG00005046729
Rainbow trout	MODERN SPECIES	2	zgc:65851 (ENSOMYG00000037871)	ENSOMYG00000076338	ENSOMYG00000037865	snrnp27 (ENSOMYG00000057774)	add2 (ENSOMYG00000037852)	figla (ENSOMYG00000037836)	hk2 (ENSOMYG00000032225)	ENSOMYG00000031356	tet3 (ENSOMYG00000031346)	ENSOMYG00000056032	ap3m2 (ENSOMYG00000031323)	ENSOMYG00000077219	kat6a (ENSOMYG00000031263)	ENSOMYG00000031218	sema4c (ENSOMYG00000031056)	tbx1 (ENSOMYG00000030979) #22	ENSOMYG00000031010	TXNRD2 (ENSOMYG00000030855) #24	ARVCF (ENSOMYG00000029864) #26	TANGO2 (ENSOMYG00000029402) #27	DGCR8 (ENSOMYG00000028643) #28	ENSOMYG00000028285	TRMT2A (ENSOMYG00000026956) #29	ENSOMYG00000026571	ENSOMYG00000030202	ENSOMYG00000026468 #31	pgam5 (ENSOMYG00000026424)	ANKLE2 (ENSOMYG00000026394)	golga3 (ENSOMYG00000020924)	chfr (ENSOMYG00000020516)	ENSOMYG00000020396
Salmo	ANCESTRAL SPECIES	19	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.b	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #24	ENSGT00940000157027.n.a.d #26	ENSGT00390000012733.n #27	ENSGT00390000015977.e #28	ENSGT00900000143393	ENSGT00530000063723.a.c #29	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #31	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Atlantic salmon	MODERN SPECIES	12	cds2 (ENSSSAG00000088151)	zgc:65851 (ENSSSAG00000077586)	ENSSSAG00000077583	snrnp27 (ENSSSAG00000077570)	add2 (ENSSSAG00000077022)	ENSSSAG00000077014	ENSSSAG00000114780	hk2 (ENSSSAG00000073421)	ENSSSAG00000080974	tet3 (ENSSSAG00000072932)	ENSSSAG00000103620	ap3m2 (ENSSSAG00000080985)	kat6a (ENSSSAG00000072653)	ENSSSAG00000072640	sema4c (ENSSSAG00000072487)	tbx1 (ENSSSAG00000072468) #22	ENSSSAG00000072461	ENSSSAG00000072453 #24	TXNRD2 (ENSSSAG00000081023) #24	ENSSSAG00000062174	ARVCF (ENSSSAG00000070791) #26	TANGO2 (ENSSSAG00000070735) #27	DGCR8 (ENSSSAG00000069919) #28	ENSSSAG00000069888	TRMT2A (ENSSSAG00000068818) #29	RANG (ENSSSAG00000068670)	ENSSSAG00000068646 #31	pgam5 (ENSSSAG00000068639)	ANKLE2 (ENSSSAG00000108432)	golga3 (ENSSSAG00000064385)	chfr (ENSSSAG00000109055)
River trout	MODERN SPECIES	39	ENSSTUG00000001482	bmp10 (ENSSTUG00000001478)	cds2 (ENSSTUG00000001218)	zgc:65851 (ENSSTUG00000001190)	MXD1 (ENSSTUG00000001183)	snrnp27 (ENSSTUG00000001175)	add2 (ENSSTUG00000050817)	figla (ENSSTUG00000050798)	hk2 (ENSSTUG00000050570)	NPFFR1 (ENSSTUG00000050481)	tet3 (ENSSTUG00000050463)	ap3m2 (ENSSTUG00000050456)	kat6a (ENSSTUG00000050392)	ENSSTUG00000050380	sema4c (ENSSTUG00000050375)	tbx1 (ENSSTUG00000050366) #22	ENSSTUG00000050363	TXNRD2 (ENSSTUG00000050360) #24	ENSSTUG00000050359	arvcfb (ENSSTUG00000050331) #26	tango2 (ENSSTUG00000050306) #27	dgcr8 (ENSSTUG00000050281) #28	ENSSTUG00000050270	trmt2a (ENSSTUG00000050197) #29	ranbp1 (ENSSTUG00000050168)	zdhhc8b (ENSSTUG00000050165) #31	pgam5 (ENSSTUG00000050161)	ankle2 (ENSSTUG00000050148)	golga3 (ENSSTUG00000049880)	chfr (ENSSTUG00000049810)	FBRSL1 (ENSSTUG00000049803)
Huchen	MODERN SPECIES	997																tbx1 (ENSHHUG00000046442) #22	ENSHHUG00000046437 #24	ENSHHUG00000046431 #24	arvcfb (ENSHHUG00000046022) #26
Northern pike	MODERN SPECIES	12	cds2 (ENSELUG00000005751)	zgc:65851 (ENSELUG00000005774)	ENSELUG00000005790	snrnp27 (ENSELUG00000005829)	add2 (ENSELUG00000005908)	figla (ENSELUG00000005936)	hk2 (ENSELUG00000005968)	NPFFR1 (ENSELUG00000006131)	tet3 (ENSELUG00000006238)	ap3m2 (ENSELUG00000001382)	kat6a (ENSELUG00000006325)	ENSELUG00000006380	sema4c (ENSELUG00000006455)	ENSELUG00000026545	ENSELUG00000026890	tbx1 (ENSELUG00000006473) #22	gnb1l (ENSELUG00000006506)	TXNRD2 (ENSELUG00000006541) #24	arvcfb (ENSELUG00000006868) #26	tango2 (ENSELUG00000006944) #27	dgcr8 (ENSELUG00000006969) #28	trmt2a (ENSELUG00000006996) #29	ENSELUG00000006974	RANBP1 (ENSELUG00000007065) #30	zdhhc8b (ENSELUG00000007087) #31	pgam5 (ENSELUG00000007105)	ankle2 (ENSELUG00000007115)	golga3 (ENSELUG00000007469)	chfr (ENSELUG00000007647)	FBRSL1 (ENSELUG00000007797)	ENSELUG00000024671
Otomorpha	ANCESTRAL SPECIES	97	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00900000143393	ENSGT00530000063723.a #29	ENSGT00940000154389.b	ENSGT00900000141073 #30	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a #31	ENSGT00400000022306	ENSGT00940000160709
Clupeiformes	ANCESTRAL SPECIES	73	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157027.n.a #26	ENSGT00390000012733 #27	ENSGT00390000015977 #28	ENSGT00530000063723.a #29	ENSGT00900000143393	ENSGT00900000141073 #30	ENSGT00940000154389.b	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a #31	ENSGT00400000022306	ENSGT00940000160709
Denticle herring	MODERN SPECIES	2	bmp10 (ENSDCDG00000018939)	arhgap25 (ENSDCDG00000018981)	cds2 (ENSDCDG00000019064)	zgc:65851 (ENSDCDG00000021503)	ENSDCDG00000021945	snrnp27 (ENSDCDG00000021946)	add2 (ENSDCDG00000021966)	figla (ENSDCDG00000022329)	hk2 (ENSDCDG00000022344)	ENSDCDG00000022636	tet3 (ENSDCDG00000022909)	ap3m2 (ENSDCDG00000022914)	kat6a (ENSDCDG00000022927)	ENSDCDG00000022941	sema4c (ENSDCDG00000022946)	tbx1 (ENSDCDG00000022975) #22	gnb1l (ENSDCDG00000022980)	TXNRD2 (ENSDCDG00000022996) #24	arvcfb (ENSDCDG00000023289) #26	tango2 (ENSDCDG00000025871) #27	dgcr8 (ENSDCDG00000025887) #28	trmt2a (ENSDCDG00000026030) #29	ENSDCDG00000026403	RANBP1 (ENSDCDG00000026406) #30	golga3 (ENSDCDG00000026465)	ankle2 (ENSDCDG00000027240)	pgam5 (ENSDCDG00000027242)	zdhhc8b (ENSDCDG00000027244) #31	chfr (ENSDCDG00000027446)	FBRSL1 (ENSDCDG00000027475)	GALNT9 (ENSDCDG00000027607)
Atlantic herring	MODERN SPECIES	23	cds2 (ENSCHAG00000000928)	zgc:65851 (ENSCHAG00000027688)	ENSCHAG00000027687	ENSCHAG00000027686	snrnp27 (ENSCHAG00000027685)	add2 (ENSCHAG00000027679)	figla (ENSCHAG00000027670)	ENSCHAG00000027668	hk2 (ENSCHAG00000027656)	ENSCHAG00000027639	tet3 (ENSCHAG00000027625)	ap3m2 (ENSCHAG00000027617)	kat6a (ENSCHAG00000027608)	ENSCHAG00000027601	sema4c (ENSCHAG00000027593)	tbx1 (ENSCHAG00000027586) #22	gnb1l (ENSCHAG00000027582)	TXNRD2 (ENSCHAG00000027573) #24	arvcfb (ENSCHAG00000027519) #26	tango2 (ENSCHAG00000027490) #27	dgcr8 (ENSCHAG00000027475) #28	trmt2a (ENSCHAG00000027453) #29	ranbp1 (ENSCHAG00000027429)	golga3 (ENSCHAG00000027310)	ankle2 (ENSCHAG00000027242)	pgam5 (ENSCHAG00000027229)	zdhhc8b (ENSCHAG00000027188) #31	chfr (ENSCHAG00000027104)	ENSCHAG00000027085	FBRSL1 (ENSCHAG00000027020)	GALNT9 (ENSCHAG00000027007)
Otophysi	ANCESTRAL SPECIES	168	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986
Cyprinoidei	ANCESTRAL SPECIES	16	ENSGT00940000156317.w.b.a	ENSGT00530000063691.a	ENSGT00950000183162.a.b.i.b.a	ENSGT00940000165501	ENSGT00940000159446.a	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991.a	ENSGT00940000156962.lb	ENSGT00940000154352.A	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157251	ENSGT00940000155735.q.c	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	19	ENSGT00530000063691.a.g	ENSGT00950000183162.a.b.i.b.a	ENSGT00900000140979.a.b.db	ENSGT00940000165501.c.a	ENSGT00940000159446.a.a	ENSGT00730000111237	ENSGT00940000159299.a	ENSGT00440000033552	ENSGT00950000182787.C.k	ENSGT01070000253744.b.a.a.a.b.a	ENSGT00940000157631.o	ENSGT00940000157991.a	ENSGT00940000156962.lb.a	ENSGT00940000154352.A.f.a	ENSGT00940000159885.g	ENSGT00940000154816.a.b.g #22	ENSGT00390000018606.c	ENSGT00940000158832.g.a #24	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000015428	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b
Cyprininae_a	ANCESTRAL SPECIES	26	ENSGT00940000156317.w.b.a.a	ENSGT00530000063691.a.g	ENSGT00950000183162.a.b.i.b.a	ENSGT00940000165501.c.a	ENSGT00940000159446.a.a	ENSGT00730000111237	ENSGT00940000159299.a	ENSGT00440000033552	ENSGT00950000182787.C.k	ENSGT01070000253744.b.a.a.a.b.a	ENSGT00940000157631.o	ENSGT00940000157991.a	ENSGT00940000156962.lb.a	ENSGT00940000154352.A.f.a	ENSGT00940000159885.g	ENSGT00940000154816.a.b.g #22	ENSGT00390000018606.c	ENSGT00940000158832.g.a #24	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b	ENSGT00950000183200.B.h
Common carp reference	MODERN SPECIES	7	purba (ENSCCRG00000016891)	h2az2a (ENSCCRG00000051659)	zgc:65851 (ENSCCRG00000070611)	ENSCCRG00000081568	add2 (ENSCCRG00000042603)	figla (ENSCCRG00000042552)	hk2 (ENSCCRG00000012171)	ENSCCRG00000033497	ENSCCRG00000065797	tet3 (ENSCCRG00000066965)	ap3m2 (ENSCCRG00000000341)	kat6a (ENSCCRG00000074038)	ENSCCRG00000081919	si:ch211-244o22.2 (ENSCCRG00000051535)	sema4c (ENSCCRG00000082690)	tbx1 (ENSCCRG00000036080) #22	gnb1l (ENSCCRG00000039704)	TXNRD2 (ENSCCRG00000057214) #24	pebp1 (ENSCCRG00000005062)	TAOK3 (ENSCCRG00000033318)	suds3 (ENSCCRG00000005869)	ENSCCRG00000010420	hspb8 (ENSCCRG00000080290)	ENSCCRG00000010417	xbp1 (ENSCCRG00000044401)	ENSCCRG00000043618	coq5 (ENSCCRG00000055912)	kremen1 (ENSCCRG00000044690)	ENSCCRG00000062505	ENSCCRG00000060093	ENSCCRG00000044630
Golden-line barbel	MODERN SPECIES	433											tet3 (ENSSGRG00000048372)	ap3m2 (ENSSGRG00000048386)	kat6a (ENSSGRG00000048502)	si:ch211-244o22.2 (ENSSGRG00000048505)	sema4c (ENSSGRG00000048510)	tbx1 (ENSSGRG00000048526) #22	gnb1l (ENSSGRG00000048534)	ENSSGRG00000048540	pebp1 (ENSSGRG00000048714)	suds3 (ENSSGRG00000048722)
Goldfish	MODERN SPECIES	44	purba (ENSCARG00000016083)	ENSCARG00000016040	zgc:65851 (ENSCARG00000016022)	ENSCARG00000016019	snrnp27 (ENSCARG00000016013)	add2 (ENSCARG00000015852)	figla (ENSCARG00000015830)	hk2 (ENSCARG00000012783)	ENSCARG00000012641	tet3 (ENSCARG00000012619)	ap3m2 (ENSCARG00000012580)	kat6a (ENSCARG00000006569)	si:ch211-244o22.2 (ENSCARG00000006530)	sema4c (ENSCARG00000006257)	ENSCARG00000006217	tbx1 (ENSCARG00000006077) #22	gnb1l (ENSCARG00000006048)	ENSCARG00000006041	TXNRD2 (ENSCARG00000005541) #24	pebp1 (ENSCARG00000005506)	TAOK3 (ENSCARG00000005361)	suds3 (ENSCARG00000005332)	ENSCARG00000005321	hspb8 (ENSCARG00000005317)	ENSCARG00000005309	ENSCARG00000005294	xbp1 (ENSCARG00000005276)	ENSCARG00000005269	ZNRF3 (ENSCARG00000005245)	coq5 (ENSCARG00000005229)	kremen1 (ENSCARG00000005209)
Cyprininae	ANCESTRAL SPECIES	267	ENSGT00940000155135.eb.a.a	ENSGT00390000004511.c.b.f.a	ENSGT00940000156317.w.b.a.b	ENSGT00530000063691.a.h	ENSGT00950000183162.a.b.i.b.b	ENSGT00940000165501.c.b	ENSGT00940000159446.a.b	ENSGT00940000159299.b	ENSGT00950000182787.C.l	ENSGT01070000253744.b.a.a.a.b.b	ENSGT00940000157631.p	ENSGT00940000157991.b	ENSGT00940000156962.lb.b	ENSGT00940000154352.A.f.b	ENSGT00940000159885.h	ENSGT00940000154816.a.b.h #22	ENSGT00390000018606.d	ENSGT00940000158832.g.b #24	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a
Goldfish	MODERN SPECIES	23	osbp2b (ENSCARG00000040672)	camk2b1 (ENSCARG00000040764)	si:dkey-174n20.1 (ENSCARG00000040853)	ENSCARG00000040882	ranbp1 (ENSCARG00000040895)	golga3 (ENSCARG00000041123)	ankle2 (ENSCARG00000042941)	pgam5 (ENSCARG00000043637)	bri3bp (ENSCARG00000043647)	ENSCARG00000043666	tet3 (ENSCARG00000043682)	AP3M2 (ENSCARG00000043794)	kat6a (ENSCARG00000043972)	si:ch211-244o22.2 (ENSCARG00000044132)	sema4c (ENSCARG00000044195)	tbx1 (ENSCARG00000044535) #22	TAOK3 (ENSCARG00000044621)	suds3 (ENSCARG00000044831)	ENSCARG00000044996	ENSCARG00000045008	ENSCARG00000045029	hspb8 (ENSCARG00000045038)	ENSCARG00000045059	xbp1 (ENSCARG00000045072)	ENSCARG00000045100	ENSCARG00000045135	ENSCARG00000045145	ENSCARG00000045156	ENSCARG00000045170	ENSCARG00000045174	ENSCARG00000045177
Cyprininae_a	ANCESTRAL SPECIES	262	ENSGT00940000155135.eb.a.a	ENSGT00390000004511.c.b.f.a	ENSGT00940000156317.w.b.a.b	ENSGT00530000063691.a.h	ENSGT00950000183162.a.b.i.b.b	ENSGT00940000165501.c.b	ENSGT00940000159446.a.b	ENSGT00940000159299.b	ENSGT00950000182787.C.l	ENSGT01070000253744.b.a.a.a.b.b	ENSGT00940000157631.p	ENSGT00940000157991.b	ENSGT00940000156962.lb.b	ENSGT00940000154352.A.f.b	ENSGT00940000159885.h	ENSGT00940000154816.a.b.h #22	ENSGT00390000018606.d	ENSGT00940000158832.g.b #24	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a
Common carp reference	MODERN SPECIES	15	ENSCCRG00000071340	ENSCCRG00000058879	ENSCCRG00000056776	ENSCCRG00000032514	zgc:65851 (ENSCCRG00000058685)	ENSCCRG00000066495	add2 (ENSCCRG00000031781)	ENSCCRG00000052303	tet3 (ENSCCRG00000038994)	ENSCCRG00000001582	kat6a (ENSCCRG00000075196)	ENSCCRG00000061024	si:ch211-244o22.2 (ENSCCRG00000065624)	sema4c (ENSCCRG00000078914)	ENSCCRG00000065939	tbx1 (ENSCCRG00000032911) #22	gnb1l (ENSCCRG00000027647)	TXNRD2 (ENSCCRG00000027633) #24	ENSCCRG00000033324	TAOK3 (ENSCCRG00000004967)	suds3 (ENSCCRG00000048809)	ENSCCRG00000021246	hspb8 (ENSCCRG00000021250)	ENSCCRG00000000168	xbp1 (ENSCCRG00000070680)	ENSCCRG00000023015	kremen1 (ENSCCRG00000078190)	ENSCCRG00000021240	slc39a14 (ENSCCRG00000073267)	piwil2 (ENSCCRG00000061919)	ENSCCRG00000040060
Golden-line barbel	MODERN SPECIES	1371																tbx1 (ENSSGRG00000020384) #22	gnb1l (ENSSGRG00000020385)	ENSSGRG00000020387 #24	ENSSGRG00000020393	ENSSGRG00000021124	ENSSGRG00000021127	suds3 (ENSSGRG00000021133)
Zebrafish	MODERN SPECIES	20	ENSDARG00000068011	purba (ENSDARG00000068822)	h2az2a (ENSDARG00000068820)	zgc:65851 (ENSDARG00000012281)	ENSDARG00000032039	snrnp27 (ENSDARG00000035625)	add2 (ENSDARG00000074581)	figla (ENSDARG00000087166)	hk2 (ENSDARG00000101482)	ENSDARG00000062631	tet3 (ENSDARG00000062646)	ap3m2 (ENSDARG00000016128)	kat6a (ENSDARG00000018907)	si:ch211-244o22.2 (ENSDARG00000068759)	sema4c (ENSDARG00000079611)	tbx1 (ENSDARG00000031891) #22	gnb1l (ENSDARG00000036293)	TXNRD2 (ENSDARG00000094470) #24	TXNRD2 (ENSDARG00000075923) #24	pebp1 (ENSDARG00000042069)	TAOK3 (ENSDARG00000060751)	suds3 (ENSDARG00000073737)	ENSDARG00000114460	ENSDARG00000086327	ENSDARG00000068742	hspb8 (ENSDARG00000058365)	ENSDARG00000105422	xbp1 (ENSDARG00000035622)	znrf3 (ENSDARG00000062573)	coq5 (ENSDARG00000035618)	kremen1 (ENSDARG00000062579)
Characiphysae	ANCESTRAL SPECIES	14	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00940000182449	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c
Channel catfish	MODERN SPECIES	14	trmt2a (ENSIPUG00000016834) #29	ATP6V0A2 (ENSIPUG00000016932)	DNAH10 (ENSIPUG00000016978)	nefl (ENSIPUG00000017157)	mxd1 (ENSIPUG00000017173)	snrnp27 (ENSIPUG00000017182)	add2 (ENSIPUG00000017203)	figla (ENSIPUG00000017254)	hk2 (ENSIPUG00000017279)	NPFFR1 (ENSIPUG00000017374)	tet3 (ENSIPUG00000017449)	ap3m2 (ENSIPUG00000017491)	kat6a (ENSIPUG00000017536)	cdca2 (ENSIPUG00000017664)	sema4c (ENSIPUG00000017679)	tbx1 (ENSIPUG00000017709) #22	gnb1l (ENSIPUG00000017736)	TXNRD2 (ENSIPUG00000017765) #24	TAOK3 (ENSIPUG00000017918)	pebp1 (ENSIPUG00000018071)	suds3 (ENSIPUG00000018099)	ENSIPUG00000018138	hspb8 (ENSIPUG00000018154)	HSPB1 (ENSIPUG00000018214)	ENSIPUG00000018179	xbp1 (ENSIPUG00000018225)	znrf3 (ENSIPUG00000018241)	coq5 (ENSIPUG00000018269)	kremen1 (ENSIPUG00000018289)	susd2 (ENSIPUG00000018306)	slc39a14 (ENSIPUG00000018390)
Characiphysae_b	ANCESTRAL SPECIES	12	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c	ENSGT00950000183200.B
Characoidei	ANCESTRAL SPECIES	140	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606	ENSGT00940000158832 #24	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000017751
Red-bellied piranha	MODERN SPECIES	320												ap3m2 (ENSPNAG00000013821)	kat6a (ENSPNAG00000013788)	ENSPNAG00000013723	sema4c (ENSPNAG00000013700)	tbx1 (ENSPNAG00000013637) #22	gnb1l (ENSPNAG00000002844)
Mexicana tetra	MODERN SPECIES	38	ENSAMXG00000034497	snrnp27 (ENSAMXG00000041033)	add2 (ENSAMXG00000043018)	figla (ENSAMXG00000039571)	ENSAMXG00000037954	hk2 (ENSAMXG00000003475)	ENSAMXG00000033971	ap3m2 (ENSAMXG00000031890)	tet3 (ENSAMXG00000015236)	ENSAMXG00000038247	kat6a (ENSAMXG00000015159)	ENSAMXG00000015080	sema4c (ENSAMXG00000015033)	ENSAMXG00000039665	ENSAMXG00000033469	tbx1 (ENSAMXG00000020444) #22	gnb1l (ENSAMXG00000029845)	TXNRD2 (ENSAMXG00000033940) #24	pebp1 (ENSAMXG00000040321)	pebp1 (ENSAMXG00000042291)	TAOK3 (ENSAMXG00000013594)	suds3 (ENSAMXG00000013637)	ENSAMXG00000041901	ENSAMXG00000040668	ENSAMXG00000038719	hspb8 (ENSAMXG00000029753)	ENSAMXG00000029823	xbp1 (ENSAMXG00000038830)
Electric eel	MODERN SPECIES	568																tbx1 (ENSEEEG00000013061) #22	gnb1l (ENSEEEG00000013060)	TXNRD2 (ENSEEEG00000013057) #24	pebp1 (ENSEEEG00000013055)	TAOK3 (ENSEEEG00000012958)
Spotted gar	MODERN SPECIES	659	ppm1f (ENSLOCG00000002046)	TOP3B (ENSLOCG00000002058)	ENSLOCG00000002076	sdf2l1 (ENSLOCG00000002092)	ydjc (ENSLOCG00000002105)	ube2l3a (ENSLOCG00000002117)	ENSLOCG00000002127	ENSLOCG00000002138	hic2 (ENSLOCG00000002169)	pi4kaa (ENSLOCG00000002180)	serpind1 (ENSLOCG00000002284)	snap29 (ENSLOCG00000002299)	ENSLOCG00000002314	slc25a1b (ENSLOCG00000002325) #12	ENSLOCG00000002354 #13	tbx1 (ENSLOCG00000002370) #22	gnb1l (ENSLOCG00000002390)	TXNRD2 (ENSLOCG00000002405) #24	arvcfb (ENSLOCG00000002429) #26	tango2 (ENSLOCG00000002476) #27	dgcr8 (ENSLOCG00000002491) #28	trmt2a (ENSLOCG00000002517) #29	ranbp1 (ENSLOCG00000002540)	zdhhc8b (ENSLOCG00000002575) #31	pgam5 (ENSLOCG00000002606)	ankle2 (ENSLOCG00000002623)	golga3 (ENSLOCG00000002643)	ENSLOCG00000002672	ENSLOCG00000002686	chfr (ENSLOCG00000002699)	ENSLOCG00000002713
Reedfish	MODERN SPECIES	9	ypel1 (ENSECRG00000019803)	mapk1 (ENSECRG00000019848)	ppm1f (ENSECRG00000020068)	TOP3B (ENSECRG00000020109)	ENSECRG00000020175	sdf2l1 (ENSECRG00000020190)	ydjc (ENSECRG00000020206)	ube2l3a (ENSECRG00000020240)	hic2 (ENSECRG00000020263)	pi4kaa (ENSECRG00000020451)	serpind1 (ENSECRG00000020897)	snap29 (ENSECRG00000020914)	ENSECRG00000020933	slc25a1b (ENSECRG00000020955) #12	CLTCL1 (ENSECRG00000021008) #13	tbx1 (ENSECRG00000021088) #22	gnb1l (ENSECRG00000021112)	TXNRD2 (ENSECRG00000021130) #24	arvcfb (ENSECRG00000021174) #26	tango2 (ENSECRG00000021282) #27	dgcr8 (ENSECRG00000021304) #28	trmt2a (ENSECRG00000021324) #29	ENSECRG00000021344	ranbp1 (ENSECRG00000021359)	zdhhc8b (ENSECRG00000021394) #31	pgam5 (ENSECRG00000021408)	ankle2 (ENSECRG00000021441)	golga3 (ENSECRG00000021512)	chfr (ENSECRG00000021619)	ENSECRG00000021638	GALNT9 (ENSECRG00000021661)
Elephant shark	MODERN SPECIES	1576	ENSCMIG00000014336	chek2 (ENSCMIG00000014332)	gstt2 (ENSCMIG00000014330)	wscd2 (ENSCMIG00000014328)	sdf2l1 (ENSCMIG00000014327)	hic2 (ENSCMIG00000014316)	ENSCMIG00000014314	serpind1 (ENSCMIG00000014312)	pi4kaa (ENSCMIG00000014264)	snap29 (ENSCMIG00000014222)	ENSCMIG00000014220	SLC25A1 (ENSCMIG00000014213) #12	CLTCL1 (ENSCMIG00000013777) #13	ENSCMIG00000013616	ENSCMIG00000013614	tbx1 (ENSCMIG00000013611) #22	gnb1l (ENSCMIG00000013610)	TXNRD2 (ENSCMIG00000013606) #24	comt (ENSCMIG00000013599) #25	arvcfb (ENSCMIG00000013543) #26	ENSCMIG00000013520	tango2 (ENSCMIG00000013517) #27	dgcr8 (ENSCMIG00000013504) #28	ENSCMIG00000013496	trmt2a (ENSCMIG00000013467) #29	ranbp1 (ENSCMIG00000013461)	zdhhc8b (ENSCMIG00000013450) #31	pgam5 (ENSCMIG00000013445)	ankle2 (ENSCMIG00000013440)	golga3 (ENSCMIG00000013277)	chfr (ENSCMIG00000013139)
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Sauria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Archelosauria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Cryptodira	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Chinese turtle	MODERN SPECIES	709																ENSPSIG00000012149 ##22	ENSPSIG00000012404	NDUFS8 (ENSPSIG00000005784)
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Goode s thornscrub tortoise	MODERN SPECIES	18	TMX2 (ENSGEVG00005008201)	ENSGEVG00005008222	ENSGEVG00005008247	CTNND1 (ENSGEVG00005008316)	ENSGEVG00005008428	ENSGEVG00005008450	LPXN (ENSGEVG00005008468)	ZFP91 (ENSGEVG00005008487)	CNTF (ENSGEVG00005008502)	ENSGEVG00005008514	ENSGEVG00005008529	ENSGEVG00005008561	DTX4 (ENSGEVG00005008581)	ENSGEVG00005008633	MPEG1 (ENSGEVG00005008648)	TBX10 (ENSGEVG00005008681) ##22	TCIRG1 (ENSGEVG00005008750)	ENSGEVG00005008822	ENSGEVG00005008925	ENSGEVG00005009306	UNC93B1 (ENSGEVG00005009855)	MAX (ENSGEVG00005009901)	FNTB (ENSGEVG00005010025)	RAB15 (ENSGEVG00005010078)	GPX2 (ENSGEVG00005010103)	CHURC1 (ENSGEVG00005010152)	SPTB (ENSGEVG00005011161)	ENSGEVG00005017084	ENSGEVG00005017129	NUP160 (ENSGEVG00005017393)	FNBP4 (ENSGEVG00005018174)
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Episquamata	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Toxicofera	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Indian cobra	MODERN SPECIES		ENSNNAG00000015037	ENSNNAG00000015025	ENSNNAG00000015013	ENSNNAG00000014982	ENSNNAG00000014959	CLCF1 (ENSNNAG00000014943)	RAD9A (ENSNNAG00000014879)	PPP1CA (ENSNNAG00000014855)	TBC1D10C (ENSNNAG00000014817)	ENSNNAG00000014795	RPS6KB2 (ENSNNAG00000014748)	PTPRCAP (ENSNNAG00000014726)	CORO1B (ENSNNAG00000014707)	CABP4 (ENSNNAG00000014685)	ACY3 (ENSNNAG00000014664)	TBX10 (ENSNNAG00000014624) ##22	TCIRG1 (ENSNNAG00000014584)	ENSNNAG00000014335	NDUFS8 (ENSNNAG00000014296)	ENSNNAG00000013740	UNC93B1 (ENSNNAG00000013677)	MAX (ENSNNAG00000013615)	FNTB (ENSNNAG00000013581)	RAB15 (ENSNNAG00000013561)	GPX2 (ENSNNAG00000013545)	CHURC1 (ENSNNAG00000013529)	SPTB (ENSNNAG00000004240)	PLEKHG3 (ENSNNAG00000003468)	NUP160 (ENSNNAG00000003428)	FNBP4 (ENSNNAG00000003416)	ENSNNAG00000003407
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Theria	ANCESTRAL SPECIES	125																ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Xenarthra	ANCESTRAL SPECIES	35							ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00940000161287	ENSGT00940000153472.a.b
Armadillo	MODERN SPECIES	4298						ENSDNOG00000048910	KMT5B (ENSDNOG00000039986)	ENSDNOG00000049704	CHKA (ENSDNOG00000023787)	TCIRG1 (ENSDNOG00000002682)	NDUFS8 (ENSDNOG00000036530)	ENSDNOG00000037144	UNC93B1 (ENSDNOG00000038644)	ALDH3B2 (ENSDNOG00000005545)	ACY3 (ENSDNOG00000040590)	TBX10 (ENSDNOG00000025226) ##22	ENSDNOG00000034928	NDUFV1 (ENSDNOG00000007356)	GSTP1 (ENSDNOG00000035023)	ENSDNOG00000046765	CABP2 (ENSDNOG00000046652)	CDK2AP2 (ENSDNOG00000033375)	ENSDNOG00000043892	AIP (ENSDNOG00000042576)	CABP4 (ENSDNOG00000046240)	GPR152 (ENSDNOG00000033395)	CORO1B (ENSDNOG00000002044)	PTPRCAP (ENSDNOG00000034706)	RPS6KB2 (ENSDNOG00000041769)	TBC1D10C (ENSDNOG00000037883)	PPP1CA (ENSDNOG00000042750)
Afrotheria	ANCESTRAL SPECIES	9	ENSGT01030000234639.A.b.a.b.b	ENSGT00930000151035.a	ENSGT00940000170720	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Tenrec	MODERN SPECIES	6087																ENSETEG00000013047 ##22
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT01030000234639.A.b.a.b.b	ENSGT00930000151035.a	ENSGT00940000170720	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Elephant	MODERN SPECIES	532	ENSLAFG00000025815	MRPL21 (ENSLAFG00000003336)	CPT1A (ENSLAFG00000018211)	TESMIN (ENSLAFG00000008438)	ENSLAFG00000013266	PPP6R3 (ENSLAFG00000008701)	LRP5 (ENSLAFG00000008300)	ENSLAFG00000006321	KMT5B (ENSLAFG00000006490)	CHKA (ENSLAFG00000009985)	TCIRG1 (ENSLAFG00000009983)	NDUFS8 (ENSLAFG00000006283)	ENSLAFG00000009402	UNC93B1 (ENSLAFG00000009400)	ENSLAFG00000031633	TBX10 (ENSLAFG00000022296) ##22	NUDT8 (ENSLAFG00000015108)	ENSLAFG00000030851	NDUFV1 (ENSLAFG00000022729)	GSTP1 (ENSLAFG00000022378)	CABP2 (ENSLAFG00000000855)	CDK2AP2 (ENSLAFG00000010947)	PITPNM1 (ENSLAFG00000022098)	AIP (ENSLAFG00000005289)	ENSLAFG00000032093	ENSLAFG00000003585	ENSLAFG00000028907	CORO1B (ENSLAFG00000008929)	PTPRCAP (ENSLAFG00000022927)	RPS6KB2 (ENSLAFG00000008925)	ENSLAFG00000030838
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00940000163374	ENSGT00940000163889	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00940000163374	ENSGT00940000163889	ENSGT00390000010641	ENSGT00940000163435	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Common shrew	MODERN SPECIES	4881																ENSSARG00000005102 ##22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Suina	ANCESTRAL SPECIES	14	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Pig	MODERN SPECIES	10	IGHMBP2 (ENSSSCG00000012878)	ENSSSCG00000012879	CPT1A (ENSSSCG00000012880)	TESMIN (ENSSSCG00000012882)	GAL (ENSSSCG00000012883)	PPP6R3 (ENSSSCG00000012884)	LRP5 (ENSSSCG00000012885)	ENSSSCG00000012886	KMT5B (ENSSSCG00000031459)	CHKA (ENSSSCG00000012889)	TCIRG1 (ENSSSCG00000012890)	NDUFS8 (ENSSSCG00000037455)	ENSSSCG00000028501	UNC93B1 (ENSSSCG00000012893)	ALDH3B2 (ENSSSCG00000026349)	TBX10 (ENSSSCG00000034410) ##22	ENSSSCG00000035645	ENSSSCG00000052603	NDUFV1 (ENSSSCG00000012896)	ENSSSCG00000032003	ENSSSCG00000060071	CABP2 (ENSSSCG00000020764)	CDK2AP2 (ENSSSCG00000012902)	PITPNM1 (ENSSSCG00000012903)	AIP (ENSSSCG00000062981)	TMEM134 (ENSSSCG00000012905)	CABP4 (ENSSSCG00000012906)	GPR152 (ENSSSCG00000059139)	CORO1B (ENSSSCG00000012920)	PTPRCAP (ENSSSCG00000012909)	RPS6KB2 (ENSSSCG00000012910)
Chacoan peccary	MODERN SPECIES	921	IGHMBP2 (ENSCWAG00000005480)	MRPL21 (ENSCWAG00000005572)	CPT1A (ENSCWAG00000005608)	TESMIN (ENSCWAG00000005668)	GAL (ENSCWAG00000005790)	PPP6R3 (ENSCWAG00000005865)	LRP5 (ENSCWAG00000006098)	ENSCWAG00000006195	KMT5B (ENSCWAG00000006216)	CHKA (ENSCWAG00000006285)	TCIRG1 (ENSCWAG00000006382)	NDUFS8 (ENSCWAG00000006464)	ENSCWAG00000006537	UNC93B1 (ENSCWAG00000006584)	ALDH3B2 (ENSCWAG00000006631)	TBX10 (ENSCWAG00000006811) ##22	ENSCWAG00000006858	ENSCWAG00000006879	NDUFV1 (ENSCWAG00000006939)	ENSCWAG00000007036	ENSCWAG00000007049	CABP2 (ENSCWAG00000007074)	CDK2AP2 (ENSCWAG00000007150)	PITPNM1 (ENSCWAG00000007166)	AIP (ENSCWAG00000007192)	TMEM134 (ENSCWAG00000007220)	CABP4 (ENSCWAG00000007263)	GPR152 (ENSCWAG00000007292)	CORO1B (ENSCWAG00000007304)	PTPRCAP (ENSCWAG00000007330)	RPS6KB2 (ENSCWAG00000007341)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Cetacea	ANCESTRAL SPECIES	4	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000018351.n	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000018351.n	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431.jb	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Beluga whale	MODERN SPECIES	7	MRPL21 (ENSDLEG00000006686)	CPT1A (ENSDLEG00000006719)	TESMIN (ENSDLEG00000006791)	ENSDLEG00000006799	GAL (ENSDLEG00000006803)	PPP6R3 (ENSDLEG00000006813)	LRP5 (ENSDLEG00000006885)	ENSDLEG00000007238	KMT5B (ENSDLEG00000007251)	CHKA (ENSDLEG00000007265)	TCIRG1 (ENSDLEG00000007283)	NDUFS8 (ENSDLEG00000007301)	ENSDLEG00000007316	UNC93B1 (ENSDLEG00000007327)	ENSDLEG00000007341	TBX10 (ENSDLEG00000007345) ##22	ENSDLEG00000007357	ENSDLEG00000007368	NDUFV1 (ENSDLEG00000007370)	ENSDLEG00000007379	ENSDLEG00000007392	CABP2 (ENSDLEG00000007398)	CDK2AP2 (ENSDLEG00000007407)	PITPNM1 (ENSDLEG00000007424)	AIP (ENSDLEG00000007462)	TMEM134 (ENSDLEG00000007472)	CABP4 (ENSDLEG00000007479)	GPR152 (ENSDLEG00000007487)	CORO1B (ENSDLEG00000007489)	RPS6KB2 (ENSDLEG00000007496)	PTPRCAP (ENSDLEG00000007502)
Narwhal	MODERN SPECIES	314	MRPL21 (ENSMMNG00015021206)	CPT1A (ENSMMNG00015021158)	GATC (ENSMMNG00015021129)	TESMIN (ENSMMNG00015021117)	GAL (ENSMMNG00015021087)	PPP6R3 (ENSMMNG00015020961)	LRP5 (ENSMMNG00015020832)	ENSMMNG00015020790	KMT5B (ENSMMNG00015020754)	CHKA (ENSMMNG00015020690)	TCIRG1 (ENSMMNG00015020611)	NDUFS8 (ENSMMNG00015020550)	ALDH3B1 (ENSMMNG00015020460)	UNC93B1 (ENSMMNG00015020395)	ALDH3B2 (ENSMMNG00015020368)	TBX10 (ENSMMNG00015020328) ##22	ENSMMNG00015020305	ENSMMNG00015020291	NDUFV1 (ENSMMNG00015020258)	ENSMMNG00015020229	ENSMMNG00015020200	CABP2 (ENSMMNG00015020136)	CDK2AP2 (ENSMMNG00015020090)	PITPNM1 (ENSMMNG00015020033)	AIP (ENSMMNG00015019982)	TMEM134 (ENSMMNG00015019872)	CABP4 (ENSMMNG00015019821)	GPR152 (ENSMMNG00015019803)	CORO1B (ENSMMNG00015019765)	PTPRCAP (ENSMMNG00015019739)	RPS6KB2 (ENSMMNG00015019710)
Vaquita	MODERN SPECIES	19	MRPL21 (ENSPSNG00000015914)	CPT1A (ENSPSNG00000015716)	ENSPSNG00000015638	TESMIN (ENSPSNG00000015408)	GAL (ENSPSNG00000015309)	PPP6R3 (ENSPSNG00000014158)	LRP5 (ENSPSNG00000013733)	ENSPSNG00000013665	KMT5B (ENSPSNG00000013500)	CHKA (ENSPSNG00000013362)	TCIRG1 (ENSPSNG00000013176)	NDUFS8 (ENSPSNG00000013024)	ENSPSNG00000012832	UNC93B1 (ENSPSNG00000012748)	ALDH3B2 (ENSPSNG00000012373)	TBX10 (ENSPSNG00000012218) ##22	ENSPSNG00000012192	NDUFV1 (ENSPSNG00000012099)	ENSPSNG00000012038	ENSPSNG00000011890	CABP2 (ENSPSNG00000011691)	CDK2AP2 (ENSPSNG00000011634)	PITPNM1 (ENSPSNG00000011535)	AIP (ENSPSNG00000011463)	TMEM134 (ENSPSNG00000011362)	CABP4 (ENSPSNG00000011189)	GPR152 (ENSPSNG00000011149)	CORO1B (ENSPSNG00000011096)	PTPRCAP (ENSPSNG00000011039)	RPS6KB2 (ENSPSNG00000010990)	CARNS1 (ENSPSNG00000010738)
Dolphin	MODERN SPECIES	2954									CHKA (ENSTTRG00000003861)	TCIRG1 (ENSTTRG00000003830)	NDUFS8 (ENSTTRG00000003812)	ENSTTRG00000003791	UNC93B1 (ENSTTRG00000003790)	ALDH3B2 (ENSTTRG00000003786)	ENSTTRG00000003783	TBX10 (ENSTTRG00000003781) ##22	NUDT8 (ENSTTRG00000003777)	NDUFV1 (ENSTTRG00000003768)	ENSTTRG00000003746
Blue whale	MODERN SPECIES	19	MRGPRF (ENSBMSG00010005176)	IGHMBP2 (ENSBMSG00010005154)	MRPL21 (ENSBMSG00010005141)	ENSBMSG00010005133	CPT1A (ENSBMSG00010005084)	GAL (ENSBMSG00010005047)	PPP6R3 (ENSBMSG00010005022)	LRP5 (ENSBMSG00010004990)	ENSBMSG00010004983	KMT5B (ENSBMSG00010004978)	CHKA (ENSBMSG00010004966)	NDUFS8 (ENSBMSG00010004952)	ALDH3B1 (ENSBMSG00010004922)	UNC93B1 (ENSBMSG00010004898)	ALDH3B2 (ENSBMSG00010004892)	TBX10 (ENSBMSG00010004883) ##22	ENSBMSG00010004879	ENSBMSG00010004866	NDUFV1 (ENSBMSG00010004841)	ENSBMSG00010004827	ENSBMSG00010004811	CABP2 (ENSBMSG00010004797)	PITPNM1 (ENSBMSG00010004775)	AIP (ENSBMSG00010004756)	TMEM134 (ENSBMSG00010004736)	CABP4 (ENSBMSG00010004718)	CORO1B (ENSBMSG00010004704)	PTPRCAP (ENSBMSG00010004698)	RPS6KB2 (ENSBMSG00010004688)	CARNS1 (ENSBMSG00010004657)	TBC1D10C (ENSBMSG00010004620)
Pecora	ANCESTRAL SPECIES	13	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000004181	CPT1A (ENSCHYG00000004136)	TESMIN (ENSCHYG00000004115)	GAL (ENSCHYG00000004104)	PPP6R3 (ENSCHYG00000003967)	LRP5 (ENSCHYG00000003897)	ENSCHYG00000003880	KMT5B (ENSCHYG00000003849)	CHKA (ENSCHYG00000003799)	TCIRG1 (ENSCHYG00000003734)	NDUFS8 (ENSCHYG00000003690)	ALDH3B1 (ENSCHYG00000003612)	UNC93B1 (ENSCHYG00000003557)	ENSCHYG00000003548	ALDH3B2 (ENSCHYG00000003514)	TBX10 (ENSCHYG00000003486) ##22	ENSCHYG00000003477	ENSCHYG00000003458	NDUFV1 (ENSCHYG00000003440)	ENSCHYG00000003427	ENSCHYG00000003387	CABP2 (ENSCHYG00000003335)	CDK2AP2 (ENSCHYG00000003302)	PITPNM1 (ENSCHYG00000003166)	AIP (ENSCHYG00000003119)	TMEM134 (ENSCHYG00000003047)	CABP4 (ENSCHYG00000003019)	GPR152 (ENSCHYG00000003011)	CORO1B (ENSCHYG00000002991)	PTPRCAP (ENSCHYG00000002984)	RPS6KB2 (ENSCHYG00000002967)
Percora_a	ANCESTRAL SPECIES	16	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Siberian musk deer	MODERN SPECIES	1226	IGHMBP2 (ENSMMSG00000023204)	MRPL21 (ENSMMSG00000023225)	CPT1A (ENSMMSG00000023241)	TESMIN (ENSMMSG00000023272)	GAL (ENSMMSG00000023307)	PPP6R3 (ENSMMSG00000023347)	LRP5 (ENSMMSG00000023500)	ENSMMSG00000023522	KMT5B (ENSMMSG00000023533)	CHKA (ENSMMSG00000023562)	TCIRG1 (ENSMMSG00000023600)	NDUFS8 (ENSMMSG00000023617)	ENSMMSG00000023640	UNC93B1 (ENSMMSG00000023668)	ALDH3B2 (ENSMMSG00000023685)	TBX10 (ENSMMSG00000023697) ##22	ENSMMSG00000023700	ENSMMSG00000023706	ENSMMSG00000023708	NDUFV1 (ENSMMSG00000023713)	ENSMMSG00000023730	ENSMMSG00000023744	CABP2 (ENSMMSG00000023763)	CDK2AP2 (ENSMMSG00000023774)	PITPNM1 (ENSMMSG00000023779)	AIP (ENSMMSG00000023787)	ENSMMSG00000023795	CABP4 (ENSMMSG00000023807)	GPR152 (ENSMMSG00000023822)	CORO1B (ENSMMSG00000023829)	PTPRCAP (ENSMMSG00000023838)
Bovidae	ANCESTRAL SPECIES	16	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Caprinae	ANCESTRAL SPECIES	20	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000163374.g	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Rambouillet Sheep	MODERN SPECIES	13	CPT1A (ENSOARG00020016497)	TESMIN (ENSOARG00020016224)	GAL (ENSOARG00020016179)	PPP6R3 (ENSOARG00020015496)	LRP5 (ENSOARG00020015176)	ENSOARG00020015122	KMT5B (ENSOARG00020014904)	CHKA (ENSOARG00020014607)	ENSOARG00020014508	ENSOARG00020014473	NDUFS8 (ENSOARG00020014383)	ENSOARG00020014110	UNC93B1 (ENSOARG00020014035)	ENSOARG00020014001	ALDH3B2 (ENSOARG00020013912)	TBX10 (ENSOARG00020013801) ##22	NUDT8 (ENSOARG00020013703)	ENSOARG00020013607	NDUFV1 (ENSOARG00020013585)	ENSOARG00020013487	ENSOARG00020013368	CABP2 (ENSOARG00020013080)	CDK2AP2 (ENSOARG00020013021)	PITPNM1 (ENSOARG00020012916)	AIP (ENSOARG00020012864)	TMEM134 (ENSOARG00020012668)	CABP4 (ENSOARG00020012475)	GPR152 (ENSOARG00020012440)	CORO1B (ENSOARG00020012381)	PTPRCAP (ENSOARG00020012324)	RPS6KB2 (ENSOARG00020012258)
Bovinae	ANCESTRAL SPECIES	24	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
American bison	MODERN SPECIES	3011	ENSBBBG00000012361	MRPL21 (ENSBBBG00000002340)	CPT1A (ENSBBBG00000012354)	TESMIN (ENSBBBG00000012323)	GAL (ENSBBBG00000007883)	PPP6R3 (ENSBBBG00000002323)	LRP5 (ENSBBBG00000007211)	ENSBBBG00000008495	KMT5B (ENSBBBG00000011927)	CHKA (ENSBBBG00000002204)	TCIRG1 (ENSBBBG00000011829)	NDUFS8 (ENSBBBG00000011803)	ENSBBBG00000008099	UNC93B1 (ENSBBBG00000011762)	ALDH3B2 (ENSBBBG00000011745)	TBX10 (ENSBBBG00000011733) ##22	ENSBBBG00000002170	NDUFV1 (ENSBBBG00000006837)	ENSBBBG00000011688	ENSBBBG00000011647	CABP2 (ENSBBBG00000002134)	CDK2AP2 (ENSBBBG00000011578)	PITPNM1 (ENSBBBG00000011566)	AIP (ENSBBBG00000011499)	TMEM134 (ENSBBBG00000011488)	CABP4 (ENSBBBG00000011461)	GPR152 (ENSBBBG00000008097)	CORO1B (ENSBBBG00000011439)	PTPRCAP (ENSBBBG00000011426)	RPS6KB2 (ENSBBBG00000011423)	ENSBBBG00000011410
Bos	ANCESTRAL SPECIES	11	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Bos_b	ANCESTRAL SPECIES	10	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162875	ENSGT00390000010641	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005022450	CPT1A (ENSBIXG00005022352)	TESMIN (ENSBIXG00005022165)	ENSBIXG00005022087	PPP6R3 (ENSBIXG00005003728)	LRP5 (ENSBIXG00005005995)	ENSBIXG00005021753	ENSBIXG00005021733	KMT5B (ENSBIXG00005021706)	ENSBIXG00005006157	TCIRG1 (ENSBIXG00005021556)	NDUFS8 (ENSBIXG00005006662)	ENSBIXG00005021420	UNC93B1 (ENSBIXG00005021297)	ENSBIXG00005021275	TBX10 (ENSBIXG00005021245) ##22	ENSBIXG00005007675	NDUFV1 (ENSBIXG00005021193)	ENSBIXG00005021129	ENSBIXG00005021109	CABP2 (ENSBIXG00005021047)	ENSBIXG00005020965	PITPNM1 (ENSBIXG00005003531)	AIP (ENSBIXG00005020736)	TMEM134 (ENSBIXG00005003498)	CABP4 (ENSBIXG00005003484)	GPR152 (ENSBIXG00005007302)	CORO1B (ENSBIXG00005020573)	PTPRCAP (ENSBIXG00005020556)	RPS6KB2 (ENSBIXG00005007154)	CARNS1 (ENSBIXG00005020507)
Cow	MODERN SPECIES	21	MRPL21 (ENSBTAG00000004348)	CPT1A (ENSBTAG00000021999)	TESMIN (ENSBTAG00000053218)	GAL (ENSBTAG00000009393)	PPP6R3 (ENSBTAG00000009584)	ENSBTAG00000011830	LRP5 (ENSBTAG00000005903)	C29H11orf24 (ENSBTAG00000004392)	KMT5B (ENSBTAG00000001185)	CHKA (ENSBTAG00000010304)	TCIRG1 (ENSBTAG00000000292)	NDUFS8 (ENSBTAG00000012072)	ALDH3B1 (ENSBTAG00000013093)	UNC93B1 (ENSBTAG00000001193)	ENSBTAG00000012054	TBX10 (ENSBTAG00000011816) ##22	DOC2G (ENSBTAG00000021777)	NDUFV1 (ENSBTAG00000021776)	GSTP1 (ENSBTAG00000051210)	GSTP1 (ENSBTAG00000003548)	CABP2 (ENSBTAG00000022209)	CDK2AP2 (ENSBTAG00000002121)	PITPNM1 (ENSBTAG00000010482)	AIP (ENSBTAG00000010478)	TMEM134 (ENSBTAG00000004786)	CABP4 (ENSBTAG00000004785)	GPR152 (ENSBTAG00000046728)	CORO1B (ENSBTAG00000004783)	PTPRCAP (ENSBTAG00000004782)	RPS6KB2 (ENSBTAG00000009175)	CARNS1 (ENSBTAG00000017690)
Bos_a	ANCESTRAL SPECIES	34	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.f	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Wild yak	MODERN SPECIES	1533													UNC93B1 (ENSBMUG00000022067)	ENSBMUG00000022057	ALDH3B2 (ENSBMUG00000022044)	TBX10 (ENSBMUG00000022029) ##22	ENSBMUG00000022014	ENSBMUG00000021996	NDUFV1 (ENSBMUG00000021947)	ENSBMUG00000021831	CABP2 (ENSBMUG00000021781)	CDK2AP2 (ENSBMUG00000021758)	PITPNM1 (ENSBMUG00000021743)	AIP (ENSBMUG00000021692)	ENSBMUG00000021649	CABP4 (ENSBMUG00000021589)	GPR152 (ENSBMUG00000021581)	CORO1B (ENSBMUG00000021562)	ENSBMUG00000021528	RPS6KB2 (ENSBMUG00000021523)	CARNS1 (ENSBMUG00000021512)
Domestic yak	MODERN SPECIES	21	ENSBGRG00000015824	ENSBGRG00000017907	DHCR7 (ENSBGRG00000017928)	FADD (ENSBGRG00000023022)	ENSBGRG00000024302	FGF4 (ENSBGRG00000024355)	ENSBGRG00000024377	ENSBGRG00000024404	CCND1 (ENSBGRG00000024441)	ENSBGRG00000008155	ENSBGRG00000008216	ENSBGRG00000008684	ENSBGRG00000008704	ENSBGRG00000012448	ENSBGRG00000012721	TBX10 (ENSBGRG00000013152) ##22	NDUFV1 (ENSBGRG00000013540)	ENSBGRG00000013805	ENSBGRG00000013866	CABP2 (ENSBGRG00000013947)	CDK2AP2 (ENSBGRG00000014064)	ENSBGRG00000014144	ENSBGRG00000014533	CORO1B (ENSBGRG00000014832)	PPP1CA (ENSBGRG00000017991)	ENSBGRG00000018373	ENSBGRG00000018673	ENSBGRG00000019717	ENSBGRG00000021808	ENSBGRG00000022112	ENSBGRG00000022387
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Carnivora	ANCESTRAL SPECIES	7	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Caniformia	ANCESTRAL SPECIES	21	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
American mink	MODERN SPECIES	104	TESMIN (ENSNVIG00000011879)	ENSNVIG00000011907	PPP6R3 (ENSNVIG00000011985)	LRP5 (ENSNVIG00000012415)	ENSNVIG00000012467	KMT5B (ENSNVIG00000012483)	CHKA (ENSNVIG00000012580)	ENSNVIG00000012636	ENSNVIG00000012648	ENSNVIG00000012658	NDUFS8 (ENSNVIG00000012663)	ENSNVIG00000012672	UNC93B1 (ENSNVIG00000012714)	ENSNVIG00000012729	ALDH3B2 (ENSNVIG00000012740)	TBX10 (ENSNVIG00000012771) ##22	ENSNVIG00000012787	ENSNVIG00000012818	NDUFV1 (ENSNVIG00000012828)	ENSNVIG00000012875	ENSNVIG00000012900	CABP2 (ENSNVIG00000012930)	CDK2AP2 (ENSNVIG00000012971)	PITPNM1 (ENSNVIG00000012984)	AIP (ENSNVIG00000013080)	TMEM134 (ENSNVIG00000013113)	CABP4 (ENSNVIG00000013152)	GPR152 (ENSNVIG00000013164)	CORO1B (ENSNVIG00000013189)	PTPRCAP (ENSNVIG00000013201)	RPS6KB2 (ENSNVIG00000013220)
Ferret	MODERN SPECIES	233	IGHMBP2 (ENSMPUG00000004439)	MRPL21 (ENSMPUG00000004430)	CPT1A (ENSMPUG00000004418)	TESMIN (ENSMPUG00000004382)	GAL (ENSMPUG00000004372)	PPP6R3 (ENSMPUG00000004357)	LRP5 (ENSMPUG00000004345)	ENSMPUG00000004339	KMT5B (ENSMPUG00000004326)	CHKA (ENSMPUG00000004254)	TCIRG1 (ENSMPUG00000004236)	NDUFS8 (ENSMPUG00000004193)	ALDH3B1 (ENSMPUG00000004179)	UNC93B1 (ENSMPUG00000004165)	ENSMPUG00000004086	TBX10 (ENSMPUG00000004076) ##22	ENSMPUG00000004064	ENSMPUG00000004052	NDUFV1 (ENSMPUG00000004041)	ENSMPUG00000004029	ENSMPUG00000004023	CABP2 (ENSMPUG00000003977)	PITPNM1 (ENSMPUG00000003958)	AIP (ENSMPUG00000003950)	TMEM134 (ENSMPUG00000003942)	CABP4 (ENSMPUG00000003919)	CORO1B (ENSMPUG00000003912)	PTPRCAP (ENSMPUG00000019028)	RPS6KB2 (ENSMPUG00000003899)	ENSMPUG00000003876	TBC1D10C (ENSMPUG00000003862)
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00960000191071	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125.b	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00940000167974.a	ENSGT00950000185478	ENSGT00940000161468.b	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Giant Panda	MODERN SPECIES	7	ENSAMEG00000008591	CPT1A (ENSAMEG00000008595)	TESMIN (ENSAMEG00000008676)	GAL (ENSAMEG00000008690)	PPP6R3 (ENSAMEG00000008694)	LRP5 (ENSAMEG00000001320)	ENSAMEG00000030515	KMT5B (ENSAMEG00000001298)	CHKA (ENSAMEG00000001272)	TCIRG1 (ENSAMEG00000001230)	NDUFS8 (ENSAMEG00000001217)	ALDH3B1 (ENSAMEG00000001158)	UNC93B1 (ENSAMEG00000001141)	ENSAMEG00000031445	ALDH3B2 (ENSAMEG00000029412)	TBX10 (ENSAMEG00000001098) ##22	ENSAMEG00000027070	ENSAMEG00000001078	NDUFV1 (ENSAMEG00000001049)	ENSAMEG00000001020	CABP2 (ENSAMEG00000001006)	CDK2AP2 (ENSAMEG00000001002)	PITPNM1 (ENSAMEG00000000948)	AIP (ENSAMEG00000000937)	ENSAMEG00000028957	ENSAMEG00000026647	CABP4 (ENSAMEG00000000919)	GPR152 (ENSAMEG00000000918)	CORO1B (ENSAMEG00000000857)	PTPRCAP (ENSAMEG00000000855)	RPS6KB2 (ENSAMEG00000000822)
Ursus	ANCESTRAL SPECIES	21	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.f	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000163374	ENSGT00940000163889	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125.b.b.b	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00940000167974.a	ENSGT00390000011766	ENSGT00940000161468.b	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00940000155062.a
American black bear	MODERN SPECIES	6534																TBX10 (ENSUAMG00000009807) ##22	ENSUAMG00000009806	ENSUAMG00000009805	NDUFV1 (ENSUAMG00000009804)	ENSUAMG00000009803
Canidae	ANCESTRAL SPECIES	13	ENSGT00930000151035.a	ENSGT00390000005535.d	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.e.b	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a.b.a.b	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00930000151035.a	ENSGT00390000005535.c	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049.e.b	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.a.b.a.b	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Dog	MODERN SPECIES	9	ENSCAFG00845006503	CPT1A (ENSCAFG00845006637)	ENSCAFG00845006803	ENSCAFG00845006839	GAL (ENSCAFG00845006857)	PPP6R3 (ENSCAFG00845007185)	LRP5 (ENSCAFG00845007778)	ENSCAFG00845008076	KMT5B (ENSCAFG00845008157)	CHKA (ENSCAFG00845008304)	TCIRG1 (ENSCAFG00845008465)	NDUFS8 (ENSCAFG00845008677)	ENSCAFG00845008762	UNC93B1 (ENSCAFG00845008909)	ALDH3B2 (ENSCAFG00845008948)	TBX10 (ENSCAFG00845009035) ##22	ENSCAFG00845009072	ENSCAFG00845009108	NDUFV1 (ENSCAFG00845009152)	GSTP1 (ENSCAFG00845009240)	ENSCAFG00845009326	CABP2 (ENSCAFG00845009417)	CDK2AP2 (ENSCAFG00845009575)	AIP (ENSCAFG00845009822)	TMEM134 (ENSCAFG00845009895)	CABP4 (ENSCAFG00845009983)	GPR152 (ENSCAFG00845010047)	PTPRCAP (ENSCAFG00845010092)	RPS6KB2 (ENSCAFG00845010235)	CARNS1 (ENSCAFG00845010337)	TBC1D10C (ENSCAFG00845010400)
Dingo	MODERN SPECIES	36		CPT1A (ENSCAFG00020002153)	ENSCAFG00020002152	TESMIN (ENSCAFG00020002130)	GAL (ENSCAFG00020002120)	PPP6R3 (ENSCAFG00020002106)	LRP5 (ENSCAFG00020002095)	ENSCAFG00020002089	KMT5B (ENSCAFG00020001997)	CHKA (ENSCAFG00020001949)	TCIRG1 (ENSCAFG00020001934)	ENSCAFG00020001910	ENSCAFG00020001904	UNC93B1 (ENSCAFG00020001896)	ALDH3B2 (ENSCAFG00020001840)	TBX10 (ENSCAFG00020001823) ##22	NUDT8 (ENSCAFG00020001816)	ENSCAFG00020001779	ENSCAFG00020001698	ENSCAFG00020001675	ENSCAFG00020001669	CABP2 (ENSCAFG00020001633)	CDK2AP2 (ENSCAFG00020001620)	PITPNM1 (ENSCAFG00020001608)	AIP (ENSCAFG00020001604)	ENSCAFG00020001594	CABP4 (ENSCAFG00020001570)	GPR152 (ENSCAFG00020001563)	CORO1B (ENSCAFG00020001558)	PTPRCAP (ENSCAFG00020001549)	RPS6KB2 (ENSCAFG00020001528)
Felidae	ANCESTRAL SPECIES		ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Panthera	ANCESTRAL SPECIES	18	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
lion	MODERN SPECIES	10										CHKA (ENSPLOG00000011481)	TCIRG1 (ENSPLOG00000011364)	NDUFS8 (ENSPLOG00000011271)	ENSPLOG00000011172	UNC93B1 (ENSPLOG00000011063)	ALDH3B2 (ENSPLOG00000013293)	TBX10 (ENSPLOG00000013092) ##22	ENSPLOG00000013043	ENSPLOG00000012919	NDUFV1 (ENSPLOG00000012672)	ENSPLOG00000012523	CABP2 (ENSPLOG00000012338)	CDK2AP2 (ENSPLOG00000012271)	PITPNM1 (ENSPLOG00000012168)	AIP (ENSPLOG00000012104)	ENSPLOG00000011943	CABP4 (ENSPLOG00000011804)	GPR152 (ENSPLOG00000011768)	CORO1B (ENSPLOG00000011738)	PTPRCAP (ENSPLOG00000011683)	RPS6KB2 (ENSPLOG00000011644)	CARNS1 (ENSPLOG00000011427)
leopard	MODERN SPECIES	64	MRPL21 (ENSPPRG00000024109)	CPT1A (ENSPPRG00000023904)	TESMIN (ENSPPRG00000023616)	GAL (ENSPPRG00000023433)	PPP6R3 (ENSPPRG00000000661)	LRP5 (ENSPPRG00000001607)	ENSPPRG00000001623	KMT5B (ENSPPRG00000002092)	CHKA (ENSPPRG00000003923)	ENSPPRG00000004626	ENSPPRG00000004705	NDUFS8 (ENSPPRG00000004781)	ENSPPRG00000005565	UNC93B1 (ENSPPRG00000006045)	ALDH3B2 (ENSPPRG00000006205)	TBX10 (ENSPPRG00000006221) ##22	ENSPPRG00000006340	ENSPPRG00000006725	NDUFV1 (ENSPPRG00000006947)	ENSPPRG00000006958	ENSPPRG00000007615	CABP2 (ENSPPRG00000007774)	CDK2AP2 (ENSPPRG00000007878)	PITPNM1 (ENSPPRG00000008543)	AIP (ENSPPRG00000008664)	TMEM134 (ENSPPRG00000008976)	CABP4 (ENSPPRG00000009084)	GPR152 (ENSPPRG00000009357)	CORO1B (ENSPPRG00000009537)	PTPRCAP (ENSPPRG00000010851)	RPS6KB2 (ENSPPRG00000011013)
Tiger	MODERN SPECIES	461	MRGPRF (ENSPTIG00000019368)	ENSPTIG00000020123	MRPL21 (ENSPTIG00000000955)	CPT1A (ENSPTIG00000005864)	TESMIN (ENSPTIG00000011695)	PPP6R3 (ENSPTIG00000015409)	LRP5 (ENSPTIG00000009714)	ENSPTIG00000013831	ENSPTIG00000014475	CHKA (ENSPTIG00000017888)	ENSPTIG00000020468	NDUFS8 (ENSPTIG00000020944)	ALDH3B1 (ENSPTIG00000003636)	ENSPTIG00000008967	ALDH3B2 (ENSPTIG00000010435)	TBX10 (ENSPTIG00000017457) ##22	ENSPTIG00000018602	ENSPTIG00000019451	NDUFV1 (ENSPTIG00000021461)	ENSPTIG00000022063
Cat	MODERN SPECIES	241	ENSFCAG00000049624	MRPL21 (ENSFCAG00000005779)	CPT1A (ENSFCAG00000028060)	TESMIN (ENSFCAG00000025862)	GAL (ENSFCAG00000023993)	PPP6R3 (ENSFCAG00000005076)	LRP5 (ENSFCAG00000012666)	ENSFCAG00000042941	KMT5B (ENSFCAG00000009067)	CHKA (ENSFCAG00000006219)	TCIRG1 (ENSFCAG00000002995)	NDUFS8 (ENSFCAG00000002988)	ENSFCAG00000026709	UNC93B1 (ENSFCAG00000002986)	ENSFCAG00000044091	TBX10 (ENSFCAG00000001760) ##22	ENSFCAG00000022755	NDUFV1 (ENSFCAG00000001757)	GSTP1 (ENSFCAG00000001755)	CABP2 (ENSFCAG00000001754)	CDK2AP2 (ENSFCAG00000042271)	PITPNM1 (ENSFCAG00000001751)	ENSFCAG00000052433	CABP4 (ENSFCAG00000003398)	AIP (ENSFCAG00000001749)	TMEM134 (ENSFCAG00000031246)	CORO1B (ENSFCAG00000003396)	PTPRCAP (ENSFCAG00000045093)	RPS6KB2 (ENSFCAG00000003395)	CARNS1 (ENSFCAG00000003394)	PPP1CA (ENSFCAG00000028502)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Equus	ANCESTRAL SPECIES	11	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000163435.e.b	ENSGT01100000264273	ENSGT00940000163435.f	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031
Horse	MODERN SPECIES	3	ENSECAG00000035247	IGHMBP2 (ENSECAG00000019360)	MRPL21 (ENSECAG00000019258)	CPT1A (ENSECAG00000016852)	GAL (ENSECAG00000016579)	PPP6R3 (ENSECAG00000015322)	LRP5 (ENSECAG00000013180)	C12H11orf24 (ENSECAG00000028930)	KMT5B (ENSECAG00000012952)	CHKA (ENSECAG00000011539)	TCIRG1 (ENSECAG00000010196)	NDUFS8 (ENSECAG00000010175)	ALDH3B1 (ENSECAG00000007907)	UNC93B1 (ENSECAG00000007813)	ALDH3B2 (ENSECAG00000000896)	TBX10 (ENSECAG00000022406) ##22	DOC2G (ENSECAG00000022087)	ENSECAG00000054975	NDUFV1 (ENSECAG00000021477)	ENSECAG00000020462	CABP2 (ENSECAG00000020097)	CDK2AP2 (ENSECAG00000020079)	PITPNM1 (ENSECAG00000017776)	AIP (ENSECAG00000017167)	TMEM134 (ENSECAG00000016857)	CABP4 (ENSECAG00000016408)	GPR152 (ENSECAG00000016385)	CORO1B (ENSECAG00000014882)	PTPRCAP (ENSECAG00000014875)	RPS6KB2 (ENSECAG00000012221)	CARNS1 (ENSECAG00000012116)
Donkey	MODERN SPECIES	21	ENSEASG00005007733	CPT1A (ENSEASG00005007732)	TESMIN (ENSEASG00005007731)	GAL (ENSEASG00005007730)	PPP6R3 (ENSEASG00005006224)	LRP5 (ENSEASG00005006074)	ENSEASG00005036637	KMT5B (ENSEASG00005006021)	CHKA (ENSEASG00005006007)	TCIRG1 (ENSEASG00005006001)	NDUFS8 (ENSEASG00005005999)	ENSEASG00005005998	UNC93B1 (ENSEASG00005005996)	ENSEASG00005034466	ALDH3B2 (ENSEASG00005005982)	TBX10 (ENSEASG00005005973) ##22	ENSEASG00005005969	ENSEASG00005005966	NDUFV1 (ENSEASG00005005962)	ENSEASG00005026638	ENSEASG00005005960	ENSEASG00005005953	CABP2 (ENSEASG00005005950)	CDK2AP2 (ENSEASG00005005947)	PITPNM1 (ENSEASG00005005939)	AIP (ENSEASG00005005936)	TMEM134 (ENSEASG00005035157)	CABP4 (ENSEASG00005005930)	GPR152 (ENSEASG00005005928)	CORO1B (ENSEASG00005005926)	PTPRCAP (ENSEASG00005005924)
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Greater horseshoe bat	MODERN SPECIES	2	MRPL21 (ENSRFEG00010020842)	CPT1A (ENSRFEG00010020866)	TESMIN (ENSRFEG00010020904)	GAL (ENSRFEG00010020955)	PPP6R3 (ENSRFEG00010021009)	LRP5 (ENSRFEG00010021140)	ENSRFEG00010021193	KMT5B (ENSRFEG00010021206)	CHKA (ENSRFEG00010021236)	TCIRG1 (ENSRFEG00010021289)	NDUFS8 (ENSRFEG00010021301)	ENSRFEG00010021317	UNC93B1 (ENSRFEG00010021346)	ENSRFEG00010021357	ACY3 (ENSRFEG00010021361)	TBX10 (ENSRFEG00010021376) ##22	ENSRFEG00010021387	ENSRFEG00010021394	NDUFV1 (ENSRFEG00010021407)	ENSRFEG00010021433	ENSRFEG00010021451	CABP2 (ENSRFEG00010021473)	CDK2AP2 (ENSRFEG00010021494)	PITPNM1 (ENSRFEG00010021507)	AIP (ENSRFEG00010021536)	TMEM134 (ENSRFEG00010021554)	CABP4 (ENSRFEG00010021584)	GPR152 (ENSRFEG00010021609)	CORO1B (ENSRFEG00010021624)	PTPRCAP (ENSRFEG00010021642)	RPS6KB2 (ENSRFEG00010021650)
Microbat	MODERN SPECIES	1351					ENSMLUG00000026507	PPP6R3 (ENSMLUG00000013121)	LRP5 (ENSMLUG00000001206)	KMT5B (ENSMLUG00000008196)	CHKA (ENSMLUG00000017614)	TCIRG1 (ENSMLUG00000017612)	NDUFS8 (ENSMLUG00000017611)	ALDH3B1 (ENSMLUG00000029407)	UNC93B1 (ENSMLUG00000017610)	ALDH3B2 (ENSMLUG00000028367)	ENSMLUG00000011588	TBX10 (ENSMLUG00000011576) ##22	ENSMLUG00000026150	NDUFV1 (ENSMLUG00000011539)	GSTP1 (ENSMLUG00000011529)	CABP2 (ENSMLUG00000011504)	CDK2AP2 (ENSMLUG00000011488)	PITPNM1 (ENSMLUG00000011222)	AIP (ENSMLUG00000011271)	TMEM134 (ENSMLUG00000005143)	CABP4 (ENSMLUG00000005139)	GPR152 (ENSMLUG00000022557)	CORO1B (ENSMLUG00000025612)	PTPRCAP (ENSMLUG00000029066)	ENSMLUG00000005128	ENSMLUG00000005122	TBC1D10C (ENSMLUG00000005115)
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00940000163374	ENSGT00940000163889	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00940000163374	ENSGT00940000163889	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B
Tree shrew	MODERN SPECIES	5679															ENSTBEG00000000732	ENSTBEG00000009443 ##22	NUDT8 (ENSTBEG00000009338)	ENSTBEG00000008958	NDUFV1 (ENSTBEG00000008715)	GSTP1 (ENSTBEG00000007507)
Glires	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT01100000264273	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Guinea pig	MODERN SPECIES	42	MRPL21 (ENSCPOG00000038509)	CPT1A (ENSCPOG00000004344)	TESMIN (ENSCPOG00000032989)	GAL (ENSCPOG00000004337)	PPP6R3 (ENSCPOG00000007353)	LRP5 (ENSCPOG00000008119)	ENSCPOG00000000621	KMT5B (ENSCPOG00000002147)	CHKA (ENSCPOG00000022236)	TCIRG1 (ENSCPOG00000001417)	NDUFS8 (ENSCPOG00000001416)	ALDH3B1 (ENSCPOG00000021502)	UNC93B1 (ENSCPOG00000026431)	ALDH3B2 (ENSCPOG00000002523)	ACY3 (ENSCPOG00000002519)	TBX10 (ENSCPOG00000032079) ##22	ENSCPOG00000002514	ENSCPOG00000022649	NDUFV1 (ENSCPOG00000006645)	GSTP1 (ENSCPOG00000020253)	CABP2 (ENSCPOG00000023151)	CDK2AP2 (ENSCPOG00000033165)	PITPNM1 (ENSCPOG00000011204)	AIP (ENSCPOG00000025197)	TMEM134 (ENSCPOG00000034721)	CABP4 (ENSCPOG00000038418)	GPR152 (ENSCPOG00000020561)	CORO1B (ENSCPOG00000010527)	PTPRCAP (ENSCPOG00000023825)	RPS6KB2 (ENSCPOG00000010518)	CARNS1 (ENSCPOG00000010514)
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Long-tailed chinchilla	MODERN SPECIES	129	MRPL21 (ENSCLAG00000016038)	CPT1A (ENSCLAG00000016594)	TESMIN (ENSCLAG00000015628)	GAL (ENSCLAG00000016374)	PPP6R3 (ENSCLAG00000015508)	LRP5 (ENSCLAG00000016254)	ENSCLAG00000017122	KMT5B (ENSCLAG00000016628)	CHKA (ENSCLAG00000014223)	TCIRG1 (ENSCLAG00000014792)	NDUFS8 (ENSCLAG00000017156)	ALDH3B1 (ENSCLAG00000016029)	UNC93B1 (ENSCLAG00000016729)	ALDH3B2 (ENSCLAG00000017296)	ACY3 (ENSCLAG00000016314)	TBX10 (ENSCLAG00000015667) ##22	ENSCLAG00000016240	ENSCLAG00000016785	NDUFV1 (ENSCLAG00000016746)	GSTP1 (ENSCLAG00000015548)	CABP2 (ENSCLAG00000015734)	CDK2AP2 (ENSCLAG00000014787)	ENSCLAG00000015015	AIP (ENSCLAG00000016600)	TMEM134 (ENSCLAG00000016841)	CABP4 (ENSCLAG00000016497)	GPR152 (ENSCLAG00000016443)	CORO1B (ENSCLAG00000015993)	RPS6KB2 (ENSCLAG00000016408)	PTPRCAP (ENSCLAG00000016874)	CARNS1 (ENSCLAG00000016069)
Degu	MODERN SPECIES	59	TESMIN (ENSODEG00000017728)	GAL (ENSODEG00000017519)	PPP6R3 (ENSODEG00000017311)	ENSODEG00000020451	LRP5 (ENSODEG00000017493)	C11orf24 (ENSODEG00000017396)	ENSODEG00000017460	CHKA (ENSODEG00000017808)	TCIRG1 (ENSODEG00000017607)	ENSODEG00000017577	ALDH3B1 (ENSODEG00000017474)	UNC93B1 (ENSODEG00000017652)	ENSODEG00000017464	ALDH3B2 (ENSODEG00000017453)	ACY3 (ENSODEG00000017439)	TBX10 (ENSODEG00000017601) ##22	ENSODEG00000017697	ENSODEG00000017660	NDUFV1 (ENSODEG00000017535)	ENSODEG00000017726	CABP2 (ENSODEG00000017525)	CDK2AP2 (ENSODEG00000017482)	ENSODEG00000017542	ENSODEG00000017554	ENSODEG00000017587	CABP4 (ENSODEG00000017561)	GPR152 (ENSODEG00000017462)	ENSODEG00000017778	PTPRCAP (ENSODEG00000017616)	RPS6KB2 (ENSODEG00000017566)	CARNS1 (ENSODEG00000017571)
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000041256	CPT1A (ENSHGLG00000009799)	TESMIN (ENSHGLG00000006844)	GAL (ENSHGLG00000013095)	ENSHGLG00000010435	LRP5 (ENSHGLG00000012372)	C11orf24 (ENSHGLG00000018642)	KMT5B (ENSHGLG00000014467)	CHKA (ENSHGLG00000014648)	TCIRG1 (ENSHGLG00000018395)	NDUFS8 (ENSHGLG00000009570)	ALDH3B1 (ENSHGLG00000015602)	UNC93B1 (ENSHGLG00000011769)	ALDH3B2 (ENSHGLG00000010052)	ACY3 (ENSHGLG00000015831)	TBX10 (ENSHGLG00000015945) ##22	NUDT8 (ENSHGLG00000047808)	ENSHGLG00000018636	ENSHGLG00000048694	NDUFV1 (ENSHGLG00000042428)	GSTP1 (ENSHGLG00000018697)	ENSHGLG00000043193	ENSHGLG00000011960	CABP2 (ENSHGLG00000006502)	CDK2AP2 (ENSHGLG00000008013)	PITPNM1 (ENSHGLG00000008671)	AIP (ENSHGLG00000010309)	TMEM134 (ENSHGLG00000046661)	CABP4 (ENSHGLG00000012191)	GPR152 (ENSHGLG00000020880)	CORO1B (ENSHGLG00000014004)
Sciuridae	ANCESTRAL SPECIES	22	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Marmotini	ANCESTRAL SPECIES	6	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Squirrel	MODERN SPECIES	199	MRPL21 (ENSSTOG00000032759)	CPT1A (ENSSTOG00000012856)	TESMIN (ENSSTOG00000012841)	GAL (ENSSTOG00000019759)	PPP6R3 (ENSSTOG00000005109)	LRP5 (ENSSTOG00000012285)	ENSSTOG00000012277	KMT5B (ENSSTOG00000024331)	ENSSTOG00000019647	CHKA (ENSSTOG00000011503)	TCIRG1 (ENSSTOG00000024529)	NDUFS8 (ENSSTOG00000011500)	ALDH3B1 (ENSSTOG00000015155)	UNC93B1 (ENSSTOG00000011497)	ACY3 (ENSSTOG00000015148)	TBX10 (ENSSTOG00000011629) ##22	ENSSTOG00000024208	ENSSTOG00000021128	NDUFV1 (ENSSTOG00000005850)	GSTP1 (ENSSTOG00000025905)	CABP2 (ENSSTOG00000014876)	CDK2AP2 (ENSSTOG00000024042)	PITPNM1 (ENSSTOG00000027855)	AIP (ENSSTOG00000015721)	TMEM134 (ENSSTOG00000015718)	CABP4 (ENSSTOG00000019909)	GPR152 (ENSSTOG00000031517)	CORO1B (ENSSTOG00000015711)	PTPRCAP (ENSSTOG00000032084)	RPS6KB2 (ENSSTOG00000026088)	CARNS1 (ENSSTOG00000026187)
Eurasian red squirrel	MODERN SPECIES	2	TESMIN (ENSSVLG00005023772)	GAL (ENSSVLG00005023853)	ENSSVLG00005024045	LRP5 (ENSSVLG00005024864)	ENSSVLG00005024875	ENSSVLG00005024928	ENSSVLG00005024959	CHKA (ENSSVLG00005025020)	ENSSVLG00005025068	ENSSVLG00005025100	NDUFS8 (ENSSVLG00005025114)	ALDH3B1 (ENSSVLG00005025147)	UNC93B1 (ENSSVLG00005025215)	ALDH3B2 (ENSSVLG00005025242)	ACY3 (ENSSVLG00005025257)	TBX10 (ENSSVLG00005025280) ##22	ENSSVLG00005025291	ENSSVLG00005025305	NDUFV1 (ENSSVLG00005025325)	GSTP1 (ENSSVLG00005025366)	CABP2 (ENSSVLG00005025399)	ENSSVLG00005004797	PITPNM1 (ENSSVLG00005004838)	AIP (ENSSVLG00005004870)	TMEM134 (ENSSVLG00005004915)	CABP4 (ENSSVLG00005004965)	CORO1B (ENSSVLG00005004995)	PTPRCAP (ENSSVLG00005005019)	RPS6KB2 (ENSSVLG00005005042)	CARNS1 (ENSSVLG00005005060)	TBC1D10C (ENSSVLG00005005134)
Primates	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163374	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000164125	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Greater bamboo lemur	MODERN SPECIES	1196													UNC93B1 (ENSPSMG00000017927)	ALDH3B2 (ENSPSMG00000017876)	ACY3 (ENSPSMG00000017835)	TBX10 (ENSPSMG00000017814) ##22	ENSPSMG00000017796	ENSPSMG00000017792	NDUFV1 (ENSPSMG00000017743)	GSTP1 (ENSPSMG00000017706)	ENSPSMG00000017669	CABP2 (ENSPSMG00000017650)	CDK2AP2 (ENSPSMG00000017631)	PITPNM1 (ENSPSMG00000017619)	AIP (ENSPSMG00000017577)	TMEM134 (ENSPSMG00000017552)	CABP4 (ENSPSMG00000017519)	CORO1B (ENSPSMG00000017512)	PTPRCAP (ENSPSMG00000017495)	RPS6KB2 (ENSPSMG00000017487)	CARNS1 (ENSPSMG00000017445)
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Tarsier	MODERN SPECIES	1637															ACY3 (ENSTSYG00000033970)	TBX10 (ENSTSYG00000031089) ##22
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334.i	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334.i	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Pan	ANCESTRAL SPECIES	1	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00910000148520	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00390000005254.j	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334.i	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Bonobo	MODERN SPECIES	2	TESMIN (ENSPPAG00000042130)	GAL (ENSPPAG00000030688)	PPP6R3 (ENSPPAG00000040283)	LRP5 (ENSPPAG00000027899)	C11orf24 (ENSPPAG00000030344)	KMT5B (ENSPPAG00000038672)	ENSPPAG00000036484	CHKA (ENSPPAG00000037771)	TCIRG1 (ENSPPAG00000030122)	NDUFS8 (ENSPPAG00000039231)	ALDH3B1 (ENSPPAG00000030155)	UNC93B1 (ENSPPAG00000031688)	ENSPPAG00000027946	ALDH3B2 (ENSPPAG00000032213)	ACY3 (ENSPPAG00000031478)	TBX10 (ENSPPAG00000030171) ##22	NUDT8 (ENSPPAG00000043158)	NDUFV1 (ENSPPAG00000043544)	GSTP1 (ENSPPAG00000043169)	ENSPPAG00000043180	CDK2AP2 (ENSPPAG00000043090)	PITPNM1 (ENSPPAG00000044125)	AIP (ENSPPAG00000026775)	TMEM134 (ENSPPAG00000038698)	CABP4 (ENSPPAG00000031081)	GPR152 (ENSPPAG00000008770)	CORO1B (ENSPPAG00000030008)	PTPRCAP (ENSPPAG00000044074)	RPS6KB2 (ENSPPAG00000006795)	CARNS1 (ENSPPAG00000032452)	TBC1D10C (ENSPPAG00000042701)
Chimpanzee	MODERN SPECIES	2	TESMIN (ENSPTRG00000003986)	GAL (ENSPTRG00000003985)	PPP6R3 (ENSPTRG00000003984)	LRP5 (ENSPTRG00000003983)	C11H11orf24 (ENSPTRG00000003982)	KMT5B (ENSPTRG00000003981)	ENSPTRG00000051044	CHKA (ENSPTRG00000003980)	TCIRG1 (ENSPTRG00000003979)	NDUFS8 (ENSPTRG00000003978)	ALDH3B1 (ENSPTRG00000051435)	UNC93B1 (ENSPTRG00000003975)	ENSPTRG00000044434	ALDH3B2 (ENSPTRG00000003974)	ACY3 (ENSPTRG00000003973)	TBX10 (ENSPTRG00000003972) ##22	NUDT8 (ENSPTRG00000003971)	DOC2G (ENSPTRG00000052755)	NDUFV1 (ENSPTRG00000003969)	GSTP1 (ENSPTRG00000003968)	CABP2 (ENSPTRG00000003967)	CDK2AP2 (ENSPTRG00000003966)	PITPNM1 (ENSPTRG00000003965)	AIP (ENSPTRG00000003964)	TMEM134 (ENSPTRG00000003963)	CABP4 (ENSPTRG00000050164)	GPR152 (ENSPTRG00000003960)	CORO1B (ENSPTRG00000003959)	PTPRCAP (ENSPTRG00000033878)	RPS6KB2 (ENSPTRG00000003957)	CARNS1 (ENSPTRG00000028514)
Human	MODERN SPECIES	2	MRPL21 (ENSG00000197345)	CPT1A (ENSG00000110090)	TESMIN (ENSG00000132749)	GAL (ENSG00000069482)	PPP6R3 (ENSG00000110075)	LRP5 (ENSG00000162337)	C11orf24 (ENSG00000171067)	KMT5B (ENSG00000110066)	CHKA (ENSG00000110721)	TCIRG1 (ENSG00000110719)	NDUFS8 (ENSG00000110717)	ALDH3B1 (ENSG00000006534)	UNC93B1 (ENSG00000110057)	ALDH3B2 (ENSG00000132746)	ACY3 (ENSG00000132744)	TBX10 (ENSG00000167800) ##22	NUDT8 (ENSG00000167799)	NDUFV1 (ENSG00000167792)	GSTP1 (ENSG00000084207)	CABP2 (ENSG00000167791)	CDK2AP2 (ENSG00000167797)	PITPNM1 (ENSG00000110697)	AIP (ENSG00000110711)	TMEM134 (ENSG00000172663)	CABP4 (ENSG00000175544)	GPR152 (ENSG00000175514)	CORO1B (ENSG00000172725)	PTPRCAP (ENSG00000213402)	RPS6KB2 (ENSG00000175634)	CARNS1 (ENSG00000172508)	TBC1D10C (ENSG00000175463)
Gorilla	MODERN SPECIES	2	ENSGGOG00000001670	TESMIN (ENSGGOG00000001666)	GAL (ENSGGOG00000000252)	PPP6R3 (ENSGGOG00000006609)	LRP5 (ENSGGOG00000000038)	C11orf24 (ENSGGOG00000027226)	KMT5B (ENSGGOG00000004122)	TCIRG1 (ENSGGOG00000005005)	NDUFS8 (ENSGGOG00000005001)	ALDH3B1 (ENSGGOG00000004995)	ENSGGOG00000025959	ENSGGOG00000003630	ENSGGOG00000038633	ALDH3B2 (ENSGGOG00000015729)	ACY3 (ENSGGOG00000011979)	TBX10 (ENSGGOG00000011961) ##22	NUDT8 (ENSGGOG00000011953)	ENSGGOG00000023590	NDUFV1 (ENSGGOG00000011943)	GSTP1 (ENSGGOG00000013849)	ENSGGOG00000010165	CDK2AP2 (ENSGGOG00000010159)	PITPNM1 (ENSGGOG00000010148)	AIP (ENSGGOG00000010142)	TMEM134 (ENSGGOG00000042077)	CABP4 (ENSGGOG00000010025)	GPR152 (ENSGGOG00000010019)	CORO1B (ENSGGOG00000010013)	PTPRCAP (ENSGGOG00000010011)	RPS6KB2 (ENSGGOG00000009999)	CARNS1 (ENSGGOG00000009995)
Orangutan	MODERN SPECIES	2	IGHMBP2 (ENSPPYG00000002965)	ENSPPYG00000002966	CPT1A (ENSPPYG00000002967)	TESMIN (ENSPPYG00000002968)	GAL (ENSPPYG00000002969)	PPP6R3 (ENSPPYG00000002970)	LRP5 (ENSPPYG00000036218)	C11orf24 (ENSPPYG00000002972)	KMT5B (ENSPPYG00000002973)	CHKA (ENSPPYG00000002974)	NDUFS8 (ENSPPYG00000002976)	ALDH3B1 (ENSPPYG00000002977)	UNC93B1 (ENSPPYG00000020003)	ALDH3B2 (ENSPPYG00000038703)	ACY3 (ENSPPYG00000002980)	TBX10 (ENSPPYG00000002981) ##22	NUDT8 (ENSPPYG00000029677)	NDUFV1 (ENSPPYG00000002983)	GSTP1 (ENSPPYG00000002985)	CABP2 (ENSPPYG00000002986)	CDK2AP2 (ENSPPYG00000002987)	PITPNM1 (ENSPPYG00000002988)	AIP (ENSPPYG00000002989)	TMEM134 (ENSPPYG00000004100)	CABP4 (ENSPPYG00000002990)	GPR152 (ENSPPYG00000002991)	CORO1B (ENSPPYG00000002992)	PTPRCAP (ENSPPYG00000037728)	RPS6KB2 (ENSPPYG00000002993)	CARNS1 (ENSPPYG00000029387)	TBC1D10C (ENSPPYG00000002994)
Gibbon	MODERN SPECIES	19	MRPL21 (ENSNLEG00000006605)	CPT1A (ENSNLEG00000026864)	TESMIN (ENSNLEG00000006601)	GAL (ENSNLEG00000006599)	PPP6R3 (ENSNLEG00000006556)	LRP5 (ENSNLEG00000006550)	C11orf24 (ENSNLEG00000006549)	KMT5B (ENSNLEG00000033680)	CHKA (ENSNLEG00000006538)	TCIRG1 (ENSNLEG00000006527)	NDUFS8 (ENSNLEG00000006525)	ALDH3B1 (ENSNLEG00000006517)	UNC93B1 (ENSNLEG00000006504)	ALDH3B2 (ENSNLEG00000006499)	ACY3 (ENSNLEG00000006494)	ENSNLEG00000006493 ##22	ENSNLEG00000028816	NDUFV1 (ENSNLEG00000006458)	ENSNLEG00000006448	ENSNLEG00000006441	CDK2AP2 (ENSNLEG00000006438)	PITPNM1 (ENSNLEG00000026976)	AIP (ENSNLEG00000006435)	TMEM134 (ENSNLEG00000006430)	CABP4 (ENSNLEG00000006425)	GPR152 (ENSNLEG00000018914)	CORO1B (ENSNLEG00000006399)	PTPRCAP (ENSNLEG00000006397)	RPS6KB2 (ENSNLEG00000006392)	CARNS1 (ENSNLEG00000006317)	TBC1D10C (ENSNLEG00000006381)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Black snub-nosed monkey	MODERN SPECIES	1876						C11orf24 (ENSRBIG00000039269)	ENSRBIG00000037386	KMT5B (ENSRBIG00000037823)	CHKA (ENSRBIG00000024191)	TCIRG1 (ENSRBIG00000036654)	NDUFS8 (ENSRBIG00000026286)	ALDH3B1 (ENSRBIG00000031620)	UNC93B1 (ENSRBIG00000040314)	ALDH3B2 (ENSRBIG00000030727)	ACY3 (ENSRBIG00000001203)	TBX10 (ENSRBIG00000031114) ##22	NUDT8 (ENSRBIG00000039414)	ENSRBIG00000031438	NDUFV1 (ENSRBIG00000038931)	GSTP1 (ENSRBIG00000041246)	CABP2 (ENSRBIG00000042812)	CDK2AP2 (ENSRBIG00000010171)	PITPNM1 (ENSRBIG00000011676)	AIP (ENSRBIG00000036498)	TMEM134 (ENSRBIG00000030826)	CABP4 (ENSRBIG00000042584)	GPR152 (ENSRBIG00000041858)	CORO1B (ENSRBIG00000043610)	PTPRCAP (ENSRBIG00000044684)	RPS6KB2 (ENSRBIG00000036100)	CARNS1 (ENSRBIG00000040033)
Golden snub-nosed monkey	MODERN SPECIES	1279					ENSRROG00000031480	LRP5 (ENSRROG00000036339)	C11orf24 (ENSRROG00000027402)	KMT5B (ENSRROG00000045691)	CHKA (ENSRROG00000016904)	TCIRG1 (ENSRROG00000035211)	NDUFS8 (ENSRROG00000035645)	ALDH3B1 (ENSRROG00000035472)	UNC93B1 (ENSRROG00000012536)	ALDH3B2 (ENSRROG00000030687)	ACY3 (ENSRROG00000039646)	TBX10 (ENSRROG00000039702) ##22	NUDT8 (ENSRROG00000037097)	ENSRROG00000026586	NDUFV1 (ENSRROG00000037664)	GSTP1 (ENSRROG00000027191)	CABP2 (ENSRROG00000037183)	CDK2AP2 (ENSRROG00000043366)	PITPNM1 (ENSRROG00000007043)	AIP (ENSRROG00000045104)	TMEM134 (ENSRROG00000040406)	CABP4 (ENSRROG00000039803)	CORO1B (ENSRROG00000039319)	PTPRCAP (ENSRROG00000015187)	RPS6KB2 (ENSRROG00000044662)	CARNS1 (ENSRROG00000005925)	TBC1D10C (ENSRROG00000019804)
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a
Vervet Monkey	MODERN SPECIES		MRPL21 (ENSCSAG00000009065)	CPT1A (ENSCSAG00000009054)	TESMIN (ENSCSAG00000009039)	GAL (ENSCSAG00000009024)	PPP6R3 (ENSCSAG00000009005)	LRP5 (ENSCSAG00000008983)	ENSCSAG00000008972	KMT5B (ENSCSAG00000008964)	CHKA (ENSCSAG00000008953)	TCIRG1 (ENSCSAG00000008911)	NDUFS8 (ENSCSAG00000008821)	ENSCSAG00000008797	UNC93B1 (ENSCSAG00000008748)	ALDH3B2 (ENSCSAG00000008743)	ACY3 (ENSCSAG00000008735)	TBX10 (ENSCSAG00000008726) ##22	ENSCSAG00000008710	ENSCSAG00000008700	NDUFV1 (ENSCSAG00000008693)	GSTP1 (ENSCSAG00000008684)	CABP2 (ENSCSAG00000008676)	CDK2AP2 (ENSCSAG00000008667)	PITPNM1 (ENSCSAG00000008662)	AIP (ENSCSAG00000008652)	TMEM134 (ENSCSAG00000008641)	CABP4 (ENSCSAG00000008624)	GPR152 (ENSCSAG00000018962)	CORO1B (ENSCSAG00000008604)	PTPRCAP (ENSCSAG00000019165)	RPS6KB2 (ENSCSAG00000008598)	CARNS1 (ENSCSAG00000008580)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Macaca	ANCESTRAL SPECIES	2	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000163244.d.b.a.b.b.b.a.a	ENSGT01100000263493.a.b.a.b.a.b.a.b.a.a.a	ENSGT00940000153377.B.e	ENSGT00390000009529.b.a	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.e.a	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Rhesus	MODERN SPECIES	5	GAL (ENSMMUG00000064140)	PPP6R3 (ENSMMUG00000016213)	LRP5 (ENSMMUG00000031237)	ENSMMUG00000058610	ENSMMUG00000049489	C14H11orf24 (ENSMMUG00000019253)	ENSMMUG00000042838	KMT5B (ENSMMUG00000014237)	CHKA (ENSMMUG00000023192)	TCIRG1 (ENSMMUG00000023190)	NDUFS8 (ENSMMUG00000023189)	ALDH3B1 (ENSMMUG00000023188)	UNC93B1 (ENSMMUG00000023184)	ALDH3B2 (ENSMMUG00000018533)	ACY3 (ENSMMUG00000039824)	TBX10 (ENSMMUG00000056105) ##22	NUDT8 (ENSMMUG00000042611)	ENSMMUG00000062171	DOC2G (ENSMMUG00000018527)	NDUFV1 (ENSMMUG00000018526)	GSTP1 (ENSMMUG00000018524)	CABP2 (ENSMMUG00000011828)	CDK2AP2 (ENSMMUG00000057395)	PITPNM1 (ENSMMUG00000011821)	AIP (ENSMMUG00000011817)	TMEM134 (ENSMMUG00000005493)	CABP4 (ENSMMUG00000052347)	GPR152 (ENSMMUG00000005489)	ENSMMUG00000053378	CORO1B (ENSMMUG00000005488)	PTPRCAP (ENSMMUG00000005486)
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000001933	PPP6R3 (ENSMFAG00000036974)	ENSMFAG00000036113	ENSMFAG00000064267	ENSMFAG00000059616	C11orf24 (ENSMFAG00000036404)	ENSMFAG00000008768	KMT5B (ENSMFAG00000030851)	CHKA (ENSMFAG00000032927)	TCIRG1 (ENSMFAG00000030577)	NDUFS8 (ENSMFAG00000035405)	ENSMFAG00000001507	UNC93B1 (ENSMFAG00000043671)	ALDH3B2 (ENSMFAG00000044295)	ACY3 (ENSMFAG00000046339)	TBX10 (ENSMFAG00000007056) ##22	NDUFV1 (ENSMFAG00000038730)	ENSMFAG00000061940	ENSMFAG00000051463	GSTP1 (ENSMFAG00000032564)	CABP2 (ENSMFAG00000003212)	CDK2AP2 (ENSMFAG00000033158)	PITPNM1 (ENSMFAG00000046144)	AIP (ENSMFAG00000034062)	TMEM134 (ENSMFAG00000030408)	ENSMFAG00000056898	CABP4 (ENSMFAG00000038440)	CORO1B (ENSMFAG00000037995)	RPS6KB2 (ENSMFAG00000031507)	ENSMFAG00000051490	CARNS1 (ENSMFAG00000046293)
Pig-tailed macaque	MODERN SPECIES	433	CPT1A (ENSMNEG00000037562)	TESMIN (ENSMNEG00000045298)	GAL (ENSMNEG00000041422)	PPP6R3 (ENSMNEG00000045264)	LRP5 (ENSMNEG00000044124)	ENSMNEG00000035688	ENSMNEG00000035330	KMT5B (ENSMNEG00000028922)	CHKA (ENSMNEG00000041615)	TCIRG1 (ENSMNEG00000044486)	NDUFS8 (ENSMNEG00000029160)	ENSMNEG00000044884	UNC93B1 (ENSMNEG00000042693)	ALDH3B2 (ENSMNEG00000042334)	ACY3 (ENSMNEG00000041493)	TBX10 (ENSMNEG00000032749) ##22	NUDT8 (ENSMNEG00000041484)	ENSMNEG00000033340	NDUFV1 (ENSMNEG00000041086)	GSTP1 (ENSMNEG00000044300)	CABP2 (ENSMNEG00000045390)	CDK2AP2 (ENSMNEG00000042636)	PITPNM1 (ENSMNEG00000043351)	AIP (ENSMNEG00000039995)	TMEM134 (ENSMNEG00000041551)	CABP4 (ENSMNEG00000032138)	GPR152 (ENSMNEG00000030403)	CORO1B (ENSMNEG00000044473)	PTPRCAP (ENSMNEG00000043708)	RPS6KB2 (ENSMNEG00000032247)	CARNS1 (ENSMNEG00000038393)
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B.e	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000163889	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Sooty mangabey	MODERN SPECIES	518	MRPL21 (ENSCATG00000041171)	CPT1A (ENSCATG00000015860)	TESMIN (ENSCATG00000042664)	GAL (ENSCATG00000042505)	PPP6R3 (ENSCATG00000036683)	LRP5 (ENSCATG00000039241)	ENSCATG00000042618	KMT5B (ENSCATG00000042964)	CHKA (ENSCATG00000041180)	TCIRG1 (ENSCATG00000031312)	NDUFS8 (ENSCATG00000042587)	ALDH3B1 (ENSCATG00000030949)	UNC93B1 (ENSCATG00000037367)	ALDH3B2 (ENSCATG00000015105)	ACY3 (ENSCATG00000030863)	TBX10 (ENSCATG00000029511) ##22	NUDT8 (ENSCATG00000029910)	ENSCATG00000030569	NDUFV1 (ENSCATG00000028405)	GSTP1 (ENSCATG00000032849)	CABP2 (ENSCATG00000029380)	CDK2AP2 (ENSCATG00000036893)	PITPNM1 (ENSCATG00000039132)	AIP (ENSCATG00000030555)	TMEM134 (ENSCATG00000041128)	CABP4 (ENSCATG00000038209)	CORO1B (ENSCATG00000039163)	PTPRCAP (ENSCATG00000041535)	RPS6KB2 (ENSCATG00000031028)	CARNS1 (ENSCATG00000032796)	TBC1D10C (ENSCATG00000035510)
Olive baboon	MODERN SPECIES	3	CPT1A (ENSPANG00000020294)	TESMIN (ENSPANG00000013061)	ENSPANG00000043414	PPP6R3 (ENSPANG00000025892)	LRP5 (ENSPANG00000023602)	C11orf24 (ENSPANG00000023334)	ENSPANG00000003110	ENSPANG00000047861	CHKA (ENSPANG00000015385)	TCIRG1 (ENSPANG00000012975)	ALDH3B1 (ENSPANG00000010862)	UNC93B1 (ENSPANG00000025891)	ENSPANG00000049723	ENSPANG00000046704	ACY3 (ENSPANG00000024740)	TBX10 (ENSPANG00000006501) ##22	NUDT8 (ENSPANG00000009837)	ENSPANG00000008595	NDUFV1 (ENSPANG00000011236)	GSTP1 (ENSPANG00000004067)	CABP2 (ENSPANG00000026467)	CDK2AP2 (ENSPANG00000004749)	PITPNM1 (ENSPANG00000015330)	AIP (ENSPANG00000006615)	TMEM134 (ENSPANG00000007007)	CABP4 (ENSPANG00000011704)	GPR152 (ENSPANG00000012974)	CORO1B (ENSPANG00000015784)	PTPRCAP (ENSPANG00000004926)	RPS6KB2 (ENSPANG00000011196)	CARNS1 (ENSPANG00000011528)
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Mas night monkey	MODERN SPECIES	411	TESMIN (ENSANAG00000011110)	GAL (ENSANAG00000038246)	PPP6R3 (ENSANAG00000020950)	LRP5 (ENSANAG00000027436)	ENSANAG00000021978	C11orf24 (ENSANAG00000035026)	ENSANAG00000017977	KMT5B (ENSANAG00000029415)	CHKA (ENSANAG00000025868)	TCIRG1 (ENSANAG00000032110)	NDUFS8 (ENSANAG00000033484)	ALDH3B1 (ENSANAG00000022742)	UNC93B1 (ENSANAG00000026380)	ALDH3B2 (ENSANAG00000022991)	ACY3 (ENSANAG00000024838)	TBX10 (ENSANAG00000029548) ##22	ENSANAG00000026791	ENSANAG00000026619	NDUFV1 (ENSANAG00000029177)	GSTP1 (ENSANAG00000031563)	CABP2 (ENSANAG00000030444)	CDK2AP2 (ENSANAG00000034157)	PITPNM1 (ENSANAG00000025829)	AIP (ENSANAG00000022168)	TMEM134 (ENSANAG00000033007)	GPR152 (ENSANAG00000030207)	CABP4 (ENSANAG00000024753)	CORO1B (ENSANAG00000021241)	PTPRCAP (ENSANAG00000032799)	ENSANAG00000029796	CARNS1 (ENSANAG00000022851)
Cebidae	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000162915	ENSGT00530000063359.B	ENSGT00940000155904.e.b	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334.g	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Capuchin	MODERN SPECIES	102			TESMIN (ENSCCAG00000028427)	GAL (ENSCCAG00000028808)	PPP6R3 (ENSCCAG00000026978)	LRP5 (ENSCCAG00000035778)	C11orf24 (ENSCCAG00000029246)	KMT5B (ENSCCAG00000022496)	CHKA (ENSCCAG00000036109)	ENSCCAG00000030447	ENSCCAG00000036231	ALDH3B1 (ENSCCAG00000020585)	UNC93B1 (ENSCCAG00000034142)	ALDH3B2 (ENSCCAG00000025402)	ACY3 (ENSCCAG00000030848)	TBX10 (ENSCCAG00000035836) ##22	ENSCCAG00000034598	ENSCCAG00000024841	NDUFV1 (ENSCCAG00000027983)	ENSCCAG00000037776	CABP2 (ENSCCAG00000018244)	ENSCCAG00000028353	PITPNM1 (ENSCCAG00000031570)	AIP (ENSCCAG00000027474)	TMEM134 (ENSCCAG00000004430)	CABP4 (ENSCCAG00000027469)	GPR152 (ENSCCAG00000014617)	CORO1B (ENSCCAG00000019041)	PTPRCAP (ENSCCAG00000025867)	RPS6KB2 (ENSCCAG00000028374)	CARNS1 (ENSCCAG00000035608)
Bolivian squirrel monkey	MODERN SPECIES	184	GAL (ENSSBOG00000018976)	PPP6R3 (ENSSBOG00000024673)	LRP5 (ENSSBOG00000011522)	C11orf24 (ENSSBOG00000021901)	ENSSBOG00000017297	KMT5B (ENSSBOG00000018620)	ENSSBOG00000014251	CHKA (ENSSBOG00000029779)	TCIRG1 (ENSSBOG00000029778)	NDUFS8 (ENSSBOG00000020737)	ALDH3B1 (ENSSBOG00000021610)	UNC93B1 (ENSSBOG00000027617)	ENSSBOG00000019661	ALDH3B2 (ENSSBOG00000022925)	ACY3 (ENSSBOG00000026048)	TBX10 (ENSSBOG00000027660) ##22	ENSSBOG00000028474	ENSSBOG00000030579	GSTP1 (ENSSBOG00000031760)	CABP2 (ENSSBOG00000025484)	CDK2AP2 (ENSSBOG00000027862)	PITPNM1 (ENSSBOG00000014886)	AIP (ENSSBOG00000024333)	TMEM134 (ENSSBOG00000027525)	CABP4 (ENSSBOG00000022028)	CORO1B (ENSSBOG00000034400)	PTPRCAP (ENSSBOG00000021090)	RPS6KB2 (ENSSBOG00000025951)	CARNS1 (ENSSBOG00000032755)	TBC1D10C (ENSSBOG00000022365)	RAD9A (ENSSBOG00000030122)
Marmoset	MODERN SPECIES	2	TESMIN (ENSCJAG00000015860)	GAL (ENSCJAG00000015858)	ENSCJAG00000079396	PPP6R3 (ENSCJAG00000015752)	LRP5 (ENSCJAG00000015736)	C11orf24 (ENSCJAG00000043469)	KMT5B (ENSCJAG00000015727)	ENSCJAG00000022979	CHKA (ENSCJAG00000015722)	TCIRG1 (ENSCJAG00000015705)	ENSCJAG00000015686	ALDH3B1 (ENSCJAG00000015676)	UNC93B1 (ENSCJAG00000045026)	ALDH3B2 (ENSCJAG00000077097)	ACY3 (ENSCJAG00000070289)	TBX10 (ENSCJAG00000071274) ##22	ENSCJAG00000041608	NDUFV1 (ENSCJAG00000000839)	ENSCJAG00000031574	ENSCJAG00000000879	ENSCJAG00000000379	CABP2 (ENSCJAG00000000890)	CDK2AP2 (ENSCJAG00000044071)	PITPNM1 (ENSCJAG00000000908)	AIP (ENSCJAG00000000929)	TMEM134 (ENSCJAG00000000933)	CABP4 (ENSCJAG00000000939)	GPR152 (ENSCJAG00000000943)	CORO1B (ENSCJAG00000000945)	PTPRCAP (ENSCJAG00000000963)	RPS6KB2 (ENSCJAG00000000967)
Marsupialia	ANCESTRAL SPECIES	12	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.c	ENSGT00530000063359.B	ENSGT00940000155904.d	ENSGT00390000001189.b	ENSGT00940000163374	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.c	ENSGT00530000063359.B	ENSGT00940000155904.d	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Diprotodontia	ANCESTRAL SPECIES	27	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b.e	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.c	ENSGT00530000063359.B	ENSGT00940000155904.d	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460.p	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a	ENSGT00390000018717.a
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00390000005535	ENSGT01060000248595.b.a.b.a	ENSGT00940000161379	ENSGT00390000009663	ENSGT00390000009899.a.d	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000156431	ENSGT00950000182939.a.b.b.e	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.c	ENSGT00530000063359.B	ENSGT00940000155904.d	ENSGT00390000001189.b	ENSGT00940000154816.a.a ##22	ENSGT00940000162775	ENSGT00940000162875	ENSGT00390000010641	ENSGT00940000162460.p	ENSGT00940000159796	ENSGT00940000160334	ENSGT00940000161522	ENSGT00390000001289.a	ENSGT00390000011766	ENSGT00940000161468	ENSGT01030000234639.B	ENSGT00940000159031	ENSGT00390000017041	ENSGT00940000155062.a.g	ENSGT00390000018717.a
koala	MODERN SPECIES	179		ENSPCIG00000014807	TESMIN (ENSPCIG00000011057)	ENSPCIG00000011055	PPP6R3 (ENSPCIG00000011038)	LRP5 (ENSPCIG00000005308)	ENSPCIG00000013019	ENSPCIG00000020821	ENSPCIG00000037053	TCIRG1 (ENSPCIG00000022871)	NDUFS8 (ENSPCIG00000022867)	ENSPCIG00000022863	UNC93B1 (ENSPCIG00000036094)	ENSPCIG00000009224	ENSPCIG00000009223	TBX10 (ENSPCIG00000009222) ##22	ENSPCIG00000033935	ENSPCIG00000022032	NDUFV1 (ENSPCIG00000022025)	GSTP1 (ENSPCIG00000022022)	CABP2 (ENSPCIG00000022020)	PITPNM1 (ENSPCIG00000022016)	ENSPCIG00000022014	ENSPCIG00000003975	ENSPCIG00000033689	GPR152 (ENSPCIG00000003959)	CORO1B (ENSPCIG00000003938)	RPS6KB2 (ENSPCIG00000034205)	ENSPCIG00000037041	ENSPCIG00000032873	ENSPCIG00000035876
Common wonbat	MODERN SPECIES	714	ENSVURG00010024596	CPT1A (ENSVURG00010024607)	TESMIN (ENSVURG00010024616)	ENSVURG00010024620	PPP6R3 (ENSVURG00010024623)	ENSVURG00010024625	ENSVURG00010024627	KMT5B (ENSVURG00010024629)	CHKA (ENSVURG00010024636)	TCIRG1 (ENSVURG00010024654)	NDUFS8 (ENSVURG00010024656)	ENSVURG00010024659	UNC93B1 (ENSVURG00010024662)	ENSVURG00010024664	ENSVURG00010024665	TBX10 (ENSVURG00010024668) ##22	ENSVURG00010024670	ENSVURG00010024674	NDUFV1 (ENSVURG00010024680)	ENSVURG00010024685	ENSVURG00010024689	CABP2 (ENSVURG00010024694)	CDK2AP2 (ENSVURG00010024697)	PITPNM1 (ENSVURG00010024698)	TMEM134 (ENSVURG00010024702)	CABP4 (ENSVURG00010024706)	CORO1B (ENSVURG00010024714)	ENSVURG00010024721	ENSVURG00010024722	CARNS1 (ENSVURG00010024729)	TBC1D10C (ENSVURG00010024747)
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000027996	CPT1A (ENSSHAG00000003410)	TESMIN (ENSSHAG00000004539)	GAL (ENSSHAG00000005648)	PPP6R3 (ENSSHAG00000029610)	LRP5 (ENSSHAG00000004102)	ENSSHAG00000031576	KMT5B (ENSSHAG00000007069)	CHKA (ENSSHAG00000007882)	TCIRG1 (ENSSHAG00000008168)	NDUFS8 (ENSSHAG00000008291)	ENSSHAG00000021272	ENSSHAG00000002419	ENSSHAG00000024605	ENSSHAG00000004624	TBX10 (ENSSHAG00000005122) ##22	ENSSHAG00000005329	ENSSHAG00000005499	ENSSHAG00000005628	CABP2 (ENSSHAG00000001734)	ENSSHAG00000029978	AIP (ENSSHAG00000001064)	GPR152 (ENSSHAG00000025856)	ENSSHAG00000002870	RPS6KB2 (ENSSHAG00000002574)	ENSSHAG00000023289	TBC1D10C (ENSSHAG00000000027)	PPP1CA (ENSSHAG00000030720)	RAD9A (ENSSHAG00000028578)	CLCF1 (ENSSHAG00000004986)	ENSSHAG00000026149
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Characiphysae_b	ANCESTRAL SPECIES	54	ENSGT00940000157514.a	ENSGT00940000154866.A	ENSGT00940000161057	ENSGT00940000160281	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00940000167342	ENSGT00910000144115.b.bc.a	ENSGT00440000038159	ENSGT00940000158139.h	ENSGT00390000003115	ENSGT00950000183018.a.d.a	ENSGT00940000168646.a	ENSGT00940000156345.k.a	ENSGT00940000157152.A	ENSGT00940000154816.a.a ##22	ENSGT00940000157786	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.t.b	ENSGT00940000162064.t.a	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000163149.b.c.a	ENSGT00940000158785	ENSGT00940000165761.a	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.b.a	ENSGT00940000164025.a.a
Characoidei	ANCESTRAL SPECIES	55	ENSGT00940000160500	ENSGT00940000157514.a	ENSGT00940000154866.A	ENSGT00940000161057	ENSGT00940000160281	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00910000144115.b.bc.a	ENSGT00440000038159	ENSGT00940000158139.h	ENSGT00390000003115	ENSGT00950000183018.a.d.a	ENSGT00940000168646.a	ENSGT00940000156345.k.a	ENSGT00940000157152.A	ENSGT00940000154816.a.a ##22	ENSGT00940000157786	ENSGT00940000162660.a.i	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.t.b	ENSGT00940000162064.t.a	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000163149.b.c.a.c.b	ENSGT00940000158785	ENSGT00940000165761.a	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000164025.b.a
Red-bellied piranha	MODERN SPECIES	20	tcta (ENSPNAG00000007958)	glyctk (ENSPNAG00000000549)	lrrn1 (ENSPNAG00000007961)	ENSPNAG00000000557	trnt1 (ENSPNAG00000000565)	arl6ip5a (ENSPNAG00000000571)	FRMD4B (ENSPNAG00000008017)	mitfa (ENSPNAG00000008049)	ENSPNAG00000000624	zgc:113054 (ENSPNAG00000008064)	mdfic2 (ENSPNAG00000000641)	foxp1b (ENSPNAG00000008102)	limk1a (ENSPNAG00000008141)	ENSPNAG00000007157	apoa1b (ENSPNAG00000000734)	TBX10 (ENSPNAG00000008173) ##22	bace1 (ENSPNAG00000008182)	si:ch211-229n2.7 (ENSPNAG00000008186)	ENSPNAG00000000784	ENSPNAG00000008231	ENSPNAG00000000855	ENSPNAG00000008321	ENSPNAG00000008333	tgfb1a (ENSPNAG00000008344)	ENSPNAG00000000919	ppp5c (ENSPNAG00000000937)	ENSPNAG00000008380	ENSPNAG00000000970	cldn3d (ENSPNAG00000000992)	ENSPNAG00000000997	ENSPNAG00000008590
Mexicana tetra	MODERN SPECIES	8	ech1 (ENSAMXG00000014910)	ech1 (ENSAMXG00000038664)	ech1 (ENSAMXG00000029218)	hnrnpl2 (ENSAMXG00000014917)	ENSAMXG00000031648	chchd2 (ENSAMXG00000037488)	phkg1a (ENSAMXG00000031099)	psph (ENSAMXG00000014924)	NIPSNAP2 (ENSAMXG00000043257)	ENSAMXG00000035969	limk1a (ENSAMXG00000014942)	ENSAMXG00000030510	ENSAMXG00000037346	ENSAMXG00000036988	apoa1b (ENSAMXG00000031412)	ENSAMXG00000009860 ##22	bace1 (ENSAMXG00000009844)	si:ch211-229n2.7 (ENSAMXG00000035208)	ENSAMXG00000009805	ENSAMXG00000035342	ENSAMXG00000009778	ENSAMXG00000033285	ENSAMXG00000043733	tgfb1a (ENSAMXG00000009747)	ENSAMXG00000042298	ppp5c (ENSAMXG00000001706)	ENSAMXG00000031716	ENSAMXG00000036137	cldn3d (ENSAMXG00000032403)	ENSAMXG00000043565	CLDN4 (ENSAMXG00000035274)
Cyprinoidei	ANCESTRAL SPECIES	215											ENSGT01030000234590.A.a.b	ENSGT00990000205159	ENSGT00390000011810	ENSGT00390000003115	ENSGT00950000183018.a.d.a	ENSGT00940000154816.a.a ##22	ENSGT00940000157786	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.r
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Goldfish	MODERN SPECIES	34	ENSCARG00000062721	ENSCARG00000062723	gfm1 (ENSCARG00000062740)	lxn (ENSCARG00000063591)	schip1 (ENSCARG00000063622)	ENSCARG00000063735	il12a (ENSCARG00000063761)	ENSCARG00000063789	smc4 (ENSCARG00000063881)	ENSCARG00000065368	psph (ENSCARG00000065375)	NIPSNAP2 (ENSCARG00000006225)	ENSCARG00000009072	limk1a (ENSCARG00000009102)	apoa1b (ENSCARG00000009675)	TBX10 (ENSCARG00000009678) ##22	bace1 (ENSCARG00000009694)	ENSCARG00000009939	ENSCARG00000009947	ENSCARG00000010035	ENSCARG00000012068	ENSCARG00000012076	flot2b (ENSCARG00000012188)	FAM222B (ENSCARG00000013422)	txndc17 (ENSCARG00000013423)	nxn (ENSCARG00000013432)	ENSCARG00000013440	glod4 (ENSCARG00000013447)	BLTP2 (ENSCARG00000013569)	aldoca (ENSCARG00000013687)	ENSCARG00000013830
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Yellowtail amberjack	MODERN SPECIES	2287					ENSSLDG00000009169	gap43 (ENSSLDG00000009152)	ENSSLDG00000009139	ENSSLDG00000009079	ENSSLDG00000008954	ENSSLDG00000008825	ENSSLDG00000008787	SIK3 (ENSSLDG00000008708)	SIDT2 (ENSSLDG00000008461)	ENSSLDG00000008409	apoa1b (ENSSLDG00000008396)	ENSSLDG00000008382 ##22	bace1 (ENSSLDG00000008354)	pcsk7 (ENSSLDG00000008310)	tagln (ENSSLDG00000008288)	ENSSLDG00000008273	cbln20 (ENSSLDG00000008266)	cbln20 (ENSSLDG00000008252)	ENSSLDG00000008236	ENSSLDG00000008222	MFRP (ENSSLDG00000008203)	ENSSLDG00000008153	pnkp (ENSSLDG00000008122)	zgc:162193 (ENSSLDG00000008098)	ENSSLDG00000007661	tbcela (ENSSLDG00000007545)	usp2a (ENSSLDG00000007464)
Pleuronectoidei	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Tongue sole	MODERN SPECIES	14	vps26b (ENSCSEG00000015123)	thyn1 (ENSCSEG00000015102)	SYNRG (ENSCSEG00000014970)	dusp14 (ENSCSEG00000014920)	sirt2 (ENSCSEG00000014876)	GJD2 (ENSCSEG00000014863)	nop53 (ENSCSEG00000014834)	psma6l (ENSCSEG00000014833)	ENSCSEG00000014821	sars2 (ENSCSEG00000014810)	si:dkey-260j18.2 (ENSCSEG00000014800)	fbxo46 (ENSCSEG00000014794)	coq8b (ENSCSEG00000014776)	ENSCSEG00000014733	ENSCSEG00000014718	ENSCSEG00000014715 ##22	bace1 (ENSCSEG00000014707)	pcsk7 (ENSCSEG00000014699)	tagln (ENSCSEG00000014684)	cbln20 (ENSCSEG00000014679)	cbln20 (ENSCSEG00000014674)	ENSCSEG00000014646	ENSCSEG00000014622	pnkp (ENSCSEG00000014581)	ENSCSEG00000014553	zgc:162193 (ENSCSEG00000014544)	dpf1 (ENSCSEG00000014490)	KCTD14 (ENSCSEG00000014476)	rps3 (ENSCSEG00000014436)	ENSCSEG00000014426	zgc:171927 (ENSCSEG00000014416)
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00950000182928.A.a.a	ENSGT00940000159604	ENSGT00390000008202	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00730000111265	ENSGT01030000234556.a.a.b	ENSGT01030000234556.a.a.a.a	ENSGT00730000111885	ENSGT00940000173857	ENSGT01080000257333.B	ENSGT00940000157259	ENSGT00390000010091.c	ENSGT00950000183078.b.a.b	ENSGT00950000182929.A	ENSGT00940000154816.a.a ##22	ENSGT00940000174767	ENSGT00940000163374	ENSGT00940000157786	ENSGT00940000157676	ENSGT00940000155162.o.b	ENSGT00940000163520.B.g	ENSGT00940000163520.A.b.b.b.b	ENSGT00940000163520.A.b.b.a	ENSGT00940000163520.A.b.b.b.a.b	ENSGT00940000162978.a.b	ENSGT00940000162775	ENSGT00940000154525.b.b	ENSGT00940000165141.a	ENSGT00940000159302	ENSGT00390000017365.b
Gilthead seabream	MODERN SPECIES	11	ENSSAUG00010019617	igsf11 (ENSSAUG00010019618)	ENSSAUG00010019619	ENSSAUG00010019620	LSAMP (ENSSAUG00010019622)	gap43 (ENSSAUG00010019624)	ENSSAUG00010019627	ENSSAUG00010019629	ENSSAUG00010019644	ENSSAUG00010019648	ENSSAUG00010019653	SIK3 (ENSSAUG00010019678)	SIDT2 (ENSSAUG00010021100)	ENSSAUG00010022106	apoa1b (ENSSAUG00010000146)	ENSSAUG00010000157 ##22	bace1 (ENSSAUG00010000200)	pcsk7 (ENSSAUG00010000349)	tagln (ENSSAUG00010000604)	ENSSAUG00010000607	cbln20 (ENSSAUG00010000610)	cbln20 (ENSSAUG00010000615)	cbln20 (ENSSAUG00010000617)	nudt8 (ENSSAUG00010000619)	MFRP (ENSSAUG00010000621)	ENSSAUG00010000636	pnkp (ENSSAUG00010000732)	zgc:162193 (ENSSAUG00010000796)	ENSSAUG00010000832	dpf1 (ENSSAUG00010000842)	ENSSAUG00010000861
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Poecilia	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000154816.a.a ##22
Sailfin molly	MODERN SPECIES	68												ENSPLAG00000011641	SIK3 (ENSPLAG00000011621)	SIDT2 (ENSPLAG00000011585)	ENSPLAG00000000256	ENSPLAG00000011427 ##22	apoa1b (ENSPLAG00000011411)	bace1 (ENSPLAG00000011405)	pcsk7 (ENSPLAG00000011369)	tagln (ENSPLAG00000011327)	ENSPLAG00000011313	cbln20 (ENSPLAG00000011288)	cbln20 (ENSPLAG00000011275)	ENSPLAG00000011263	ENSPLAG00000011260	MFRP (ENSPLAG00000011253)	ENSPLAG00000011210	pnkp (ENSPLAG00000011201)	ENSPLAG00000011186	ENSPLAG00000011129	ENSPLAG00000011072
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Common carp reference	MODERN SPECIES	34	ENSCCRG00000076204	ENSCCRG00000066505	ENSCCRG00000067308	ENSCCRG00000065552	actr10 (ENSCCRG00000046034)	ENSCCRG00000030766	ENSCCRG00000062594	ENSCCRG00000078563	ENSCCRG00000066693	znf410 (ENSCCRG00000033444)	ENSCCRG00000033458	ENSCCRG00000033427	yy1b (ENSCCRG00000069323)	evlb (ENSCCRG00000076293)	ENSCCRG00000075564	ENSCCRG00000065359 ##22	ENSCCRG00000072345	ENSCCRG00000042360	ENSCCRG00000073839	PAK5 (ENSCCRG00000011997)	LAMP5 (ENSCCRG00000012013)	ENSCCRG00000025039	ENSCCRG00000056121	PLCB4 (ENSCCRG00000050209)	PLCB1 (ENSCCRG00000046427)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Huchen	MODERN SPECIES	114						LSAMP (ENSHHUG00000021361)	gap43 (ENSHHUG00000021354)	ENSHHUG00000021334	ENSHHUG00000021319	ENSHHUG00000021305	TMEM25 (ENSHHUG00000021296)	SIK3 (ENSHHUG00000021268)	SIDT2 (ENSHHUG00000021126)	ENSHHUG00000021082	apoa1b (ENSHHUG00000021067)	ENSHHUG00000021062 ##22	bace1 (ENSHHUG00000021045)	pcsk7 (ENSHHUG00000021004)	tagln (ENSHHUG00000020973)	ENSHHUG00000020970	cbln20 (ENSHHUG00000020966)	ENSHHUG00000020951	ENSHHUG00000020914	pnkp (ENSHHUG00000020778)	ENSHHUG00000020755	ENSHHUG00000020745	ENSHHUG00000020722	ENSHHUG00000020716	dpf1 (ENSHHUG00000020695)	ENSHHUG00000020687	numbl (ENSHHUG00000020648)
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Platypus	MODERN SPECIES	14		ENSOANG00000043549	CPT1A (ENSOANG00000043333)	IGHMBP2 (ENSOANG00000036508)	MRPL21 (ENSOANG00000006870)	ENSOANG00000049607	PPP6R3 (ENSOANG00000009636)	ENSOANG00000047290	KMT5B (ENSOANG00000048478)	CHKA (ENSOANG00000048770)	NDUFS8 (ENSOANG00000050025)	ENSOANG00000050870	UNC93B1 (ENSOANG00000036137)	ENSOANG00000047139	ACY3 (ENSOANG00000029117)	ENSOANG00000038879 ##22	ENSOANG00000046295	NDUFV1 (ENSOANG00000042354)	GSTP1 (ENSOANG00000037742)	CDK2AP2 (ENSOANG00000046933)	PITPNM1 (ENSOANG00000040791)	AIP (ENSOANG00000037575)	ENSOANG00000042594	ENSOANG00000050449	ENSOANG00000050272	CORO1B (ENSOANG00000047940)	ENSOANG00000050645	RPS6KB2 (ENSOANG00000036266)	CARNS1 (ENSOANG00000005965)	PPP1CA (ENSOANG00000011413)	RAD9A (ENSOANG00000011414)
Sauria	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Archelosauria	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Aves	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Neognathae	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00390000015415	ENSGT00950000183197.b.a	ENSGT00390000018587	ENSGT00940000153899.a.a	ENSGT00730000110905.a	ENSGT00390000001149	ENSGT00960000192722	ENSGT00940000155040.a	ENSGT00940000157180	ENSGT01060000248781	ENSGT00940000161192	ENSGT00530000063626.a	ENSGT00390000010089	ENSGT00940000155807.a	ENSGT00960000188779	ENSGT00940000154816.b ##22	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848	ENSGT00940000160477	ENSGT00390000011163	ENSGT00940000158908	ENSGT00940000156521.b	ENSGT00390000000972	ENSGT00390000003450	ENSGT00940000160201	ENSGT00390000000020.b
Passeriformes	ANCESTRAL SPECIES	39	ENSGT00940000159326	ENSGT00390000005766	ENSGT00530000063950.a.a	ENSGT00940000159551	ENSGT00390000010376	ENSGT00940000158100	ENSGT00390000003967	ENSGT00940000162640	ENSGT00940000164128.b	ENSGT00390000014780	ENSGT00950000183032.B.b.a	ENSGT00420000029802	ENSGT00410000025918.v	ENSGT00410000025918.u	ENSGT00940000156157	ENSGT00940000154816.b ##22	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b.d	ENSGT00940000155904.q.b.c	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848	ENSGT00940000160477	ENSGT00390000011163	ENSGT00940000158908	ENSGT00940000156521.b	ENSGT00390000000972	ENSGT00390000003450	ENSGT00940000160201
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00940000154816.b ##22
Flycatcher	MODERN SPECIES	24	BUB1B (ENSFALG00000001034)	PAK6 (ENSFALG00000001053)	ENSFALG00000025512	PLCB2 (ENSFALG00000001068)	ENSFALG00000001097	DISP2 (ENSFALG00000001102)	ENSFALG00000027808	IVD (ENSFALG00000001105)	BAHD1 (ENSFALG00000026001)	ENSFALG00000014648	CCDC32 (ENSFALG00000001112)	ENSFALG00000001118	RPUSD2 (ENSFALG00000001122)	ENSFALG00000024423	RAD51 (ENSFALG00000029075)	ENSFALG00000001111 ##22	TCIRG1 (ENSFALG00000001144)	NDUFS8 (ENSFALG00000025751)	ENSFALG00000001178	UNC93B1 (ENSFALG00000001185)	MAX (ENSFALG00000026119)	FNTB (ENSFALG00000001199)	RAB15 (ENSFALG00000001205)	GPX2 (ENSFALG00000001208)	CHURC1 (ENSFALG00000024378)	PLEKHG3 (ENSFALG00000001267)	NUP160 (ENSFALG00000001275)	FNBP4 (ENSFALG00000001280)	AGBL2 (ENSFALG00000001274)	MTCH2 (ENSFALG00000001294)	NDUFV1 (ENSFALG00000001321)
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT00950000183197.b.a	ENSGT00390000018587	ENSGT00940000153899.a.a	ENSGT00730000110905.a	ENSGT00390000001149	ENSGT00960000192722	ENSGT00940000155040.a	ENSGT00940000157180	ENSGT00940000161192	ENSGT00530000063626.a	ENSGT00390000010089	ENSGT00940000155807.a	ENSGT01100000263572.b	ENSGT01100000263499.a.a.d	ENSGT01100000263499.a.a.c	ENSGT00940000154816.b ##22	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848	ENSGT00940000160477	ENSGT00390000011163	ENSGT00940000158908	ENSGT00940000156521.b	ENSGT00390000000972
Golden eagle	MODERN SPECIES	7	SYT7 (ENSACCG00020012563)	DAGLA (ENSACCG00020012603)	MYRF (ENSACCG00020012724)	TMEM258 (ENSACCG00020012864)	FEN1 (ENSACCG00020012876)	ENSACCG00020012892	ENSACCG00020012905	ENSACCG00020012919	ENSACCG00020012930	ENSACCG00020012963	ENSACCG00020012981	OR9G1 (ENSACCG00020013005)	ENSACCG00020013027	ENSACCG00020013041	ENSACCG00020013058	ENSACCG00020013089 ##22	TCIRG1 (ENSACCG00020013120)	NDUFS8 (ENSACCG00020013144)	ENSACCG00020013215	ENSACCG00020013243	NUP160 (ENSACCG00020013268)	FNBP4 (ENSACCG00020013300)	AGBL2 (ENSACCG00020013340)	MTCH2 (ENSACCG00020013377)	ENSACCG00020013401	NDUFV1 (ENSACCG00020013429)	ENSACCG00020013451	CDK2AP2 (ENSACCG00020013468)	ENSACCG00020013526	ENSACCG00020013507	AIP (ENSACCG00020013542)
Kakapo	MODERN SPECIES	21	CPSF7 (ENSSHBG00005018685)	SDHAF2 (ENSSHBG00005018682)	ENSSHBG00005018680	LRRC10B (ENSSHBG00005018675)	SYT7 (ENSSHBG00005018669)	DAGLA (ENSSHBG00005018661)	ENSSHBG00005018653	MYRF (ENSSHBG00005018646)	ENSSHBG00005018644	FEN1 (ENSSHBG00005018642)	ENSSHBG00005018639	ENSSHBG00005018636	ENSSHBG00005018626	ENSSHBG00005018612	ENSSHBG00005018589	ENSSHBG00005018577 ##22	NDUFS8 (ENSSHBG00005018555)	ENSSHBG00005018550	ENSSHBG00005018248	UNC93B1 (ENSSHBG00005018233)	MAX (ENSSHBG00005018231)	FNTB (ENSSHBG00005018230)	RAB15 (ENSSHBG00005018227)	GPX2 (ENSSHBG00005018223)	CHURC1 (ENSSHBG00005018217)	SPTB (ENSSHBG00005008745)	ENSSHBG00005008435	NUP160 (ENSSHBG00005008355)	FNBP4 (ENSSHBG00005008293)	AGBL2 (ENSSHBG00005008277)	MTCH2 (ENSSHBG00005008267)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154816 #22
Hagfish	MODERN SPECIES	204				ENSEBUG00000009164	ENSEBUG00000005429	gcshb (ENSEBUG00000003914)	ENSEBUG00000002958	ENSEBUG00000010199	EHD1 (ENSEBUG00000009968)	ENSEBUG00000016456	ENSEBUG00000006229	ENSEBUG00000004704	ENSEBUG00000000398	ENSEBUG00000007107	ENSEBUG00000004682	ENSEBUG00000016552 #22	ENSEBUG00000002655