Euteleostomi	ANCESTRAL SPECIES	60	ENSGT00940000153189.A	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Sarcopterygii	ANCESTRAL SPECIES	63	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00940000163190	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Tetrapoda	ANCESTRAL SPECIES	10	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Amniota	ANCESTRAL SPECIES	16	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Mammalia	ANCESTRAL SPECIES	81	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT01100000263932	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00950000183101.b #37
Theria	ANCESTRAL SPECIES	53	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT01100000263932	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Eutheria	ANCESTRAL SPECIES	37	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000161017
Boreoeutheria	ANCESTRAL SPECIES	20	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Euarchontoglires	ANCESTRAL SPECIES	20	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Primates	ANCESTRAL SPECIES	31	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Haplorrhini	ANCESTRAL SPECIES	44	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00940000163130	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Simiiformes	ANCESTRAL SPECIES	30	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663.w.a ##35	ENSGT00940000161720
Catarrhini	ANCESTRAL SPECIES	28	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Hominoidea	ANCESTRAL SPECIES	31	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT00940000162000.d #36	ENSGT00950000183101.b #37
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT00390000017663.x.b #35	ENSGT00940000164457.A.d
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r.a #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT00390000017663.x.b.b #35	ENSGT00940000162000.d #36
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r.a #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT00390000017663.x.b.b #35	ENSGT00940000162000.d #36
Human	MODERN SPECIES	14	PRODH (ENSG00000100033) #7	DGCR2 (ENSG00000070413) #8	ESS2 (ENSG00000100056) #9	TSSK2 (ENSG00000206203) #10	GSC2 (ENSG00000063515) #11	SLC25A1 (ENSG00000100075) #12	CLTCL1 (ENSG00000070371) #13	HIRA (ENSG00000100084) #14	C22orf39 (ENSG00000242259) #15	MRPL40 (ENSG00000185608) #16	UFD1 (ENSG00000070010) #17	CDC45 (ENSG00000093009) #18	CLDN5 (ENSG00000184113) #19	SEPTIN5 (ENSG00000184702) #20	GP1BB (ENSG00000203618) #21	TBX1 (ENSG00000184058) #22	GNB1L (ENSG00000185838) #23	RTL10 (ENSG00000215012) #24	TXNRD2 (ENSG00000184470) #25	COMT (ENSG00000093010) #26	ARVCF (ENSG00000099889) #27	TANGO2 (ENSG00000183597) #28	DGCR8 (ENSG00000128191) #29	TRMT2A (ENSG00000099899) #30	RANBP1 (ENSG00000099901) #31	ZDHHC8 (ENSG00000099904) #32	CCDC188 (ENSG00000234409) #33	RTN4R (ENSG00000040608) #34	DGCR6L (ENSG00000128185) #35	ZNF74 (ENSG00000185252) #36	SCARF2 (ENSG00000244486) #37
Pan	ANCESTRAL SPECIES	35	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000155193.a.b	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r.a #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT00390000017663.x.b.b #35	ENSGT00940000162000.d #36
Chimpanzee	MODERN SPECIES	13	ENSPTRG00000043660	TSSK2 (ENSPTRG00000046622) #10	ENSPTRG00000045972	ESS2 (ENSPTRG00000014055) #9	GSC2 (ENSPTRG00000050838) #11	ENSPTRG00000045428	SLC25A1 (ENSPTRG00000014057) #12	CLTCL1 (ENSPTRG00000014058) #13	HIRA (ENSPTRG00000014060) #14	MRPL40 (ENSPTRG00000014061) #16	C22H22orf39 (ENSPTRG00000051117) #15	UFD1 (ENSPTRG00000043162) #17	CDC45 (ENSPTRG00000014064) #18	SEPTIN5 (ENSPTRG00000014066) #20	GP1BB (ENSPTRG00000033843) #21	TBX1 (ENSPTRG00000014067) #22	GNB1L (ENSPTRG00000044843) #23	ENSPTRG00000049410	TXNRD2 (ENSPTRG00000014069) #25	COMT (ENSPTRG00000014070) #26	ARVCF (ENSPTRG00000014071) #27	TANGO2 (ENSPTRG00000014072) #28	DGCR8 (ENSPTRG00000014073) #29	TRMT2A (ENSPTRG00000014074) #30	RANBP1 (ENSPTRG00000043450) #31	ZDHHC8 (ENSPTRG00000014077) #32	CCDC188 (ENSPTRG00000042466) #33	ENSPTRG00000038652	RTN4R (ENSPTRG00000014079) #34	DGCR6L (ENSPTRG00000014080) #35	ENSPTRG00000046891
Bonobo	MODERN SPECIES	13	ENSPPAG00000026954	DGCR2 (ENSPPAG00000027620) #8	TSSK2 (ENSPPAG00000015347) #10	ESS2 (ENSPPAG00000034139) #9	ENSPPAG00000035340 #11	ENSPPAG00000032546	SLC25A1 (ENSPPAG00000003691) #12	CLTCL1 (ENSPPAG00000030517) #13	HIRA (ENSPPAG00000037592) #14	MRPL40 (ENSPPAG00000030349) #16	ENSPPAG00000031774 #15	UFD1 (ENSPPAG00000035639) #17	CDC45 (ENSPPAG00000028685) #18	ENSPPAG00000040414 #19	SEPTIN5 (ENSPPAG00000042516) #20	ENSPPAG00000032550 #22	GNB1L (ENSPPAG00000041675) #23	ENSPPAG00000035063	TXNRD2 (ENSPPAG00000042002) #25	COMT (ENSPPAG00000027543) #26	ARVCF (ENSPPAG00000027324) #27	TANGO2 (ENSPPAG00000042205) #28	DGCR8 (ENSPPAG00000039507) #29	TRMT2A (ENSPPAG00000043781) #30	RANBP1 (ENSPPAG00000042966) #31	ZDHHC8 (ENSPPAG00000016192) #32	CCDC188 (ENSPPAG00000036009) #33	ENSPPAG00000006622	RTN4R (ENSPPAG00000005770) #34	ZNF74 (ENSPPAG00000035031) #36	ENSPPAG00000037889 #37
Orangutan	MODERN SPECIES	13	ENSPPYG00000032945	DGCR2 (ENSPPYG00000011571) #8	TSSK2 (ENSPPYG00000011573) #10	ESS2 (ENSPPYG00000011574) #9	GSC2 (ENSPPYG00000011575) #11	SLC25A1 (ENSPPYG00000029785) #12	CLTCL1 (ENSPPYG00000011576) #13	HIRA (ENSPPYG00000011577) #14	MRPL40 (ENSPPYG00000011578) #16	C22H22orf39 (ENSPPYG00000037291) #15	UFD1 (ENSPPYG00000011580) #17	CDC45 (ENSPPYG00000011581) #18	CLDN5 (ENSPPYG00000011582) #19	SEPTIN5 (ENSPPYG00000011583) #20	GP1BB (ENSPPYG00000011584) #21	TBX1 (ENSPPYG00000011585) #22	ENSPPYG00000033606	RTL10 (ENSPPYG00000032970) #24	GNB1L (ENSPPYG00000011586) #23	TXNRD2 (ENSPPYG00000011587) #25	ENSPPYG00000011588 #26	ARVCF (ENSPPYG00000011589) #27	TANGO2 (ENSPPYG00000011590) #28	DGCR8 (ENSPPYG00000011591) #29	TRMT2A (ENSPPYG00000011592) #30	RANBP1 (ENSPPYG00000011593) #31	ZDHHC8 (ENSPPYG00000011594) #32	ENSPPYG00000040850 ##33	ENSPPYG00000011596	RTN4R (ENSPPYG00000011597) #34	ENSPPYG00000025952 ##35
Gibbon	MODERN SPECIES	22	ENSNLEG00000034246	ENSNLEG00000028263	DGCR2 (ENSNLEG00000005117) #8	TSSK2 (ENSNLEG00000019208) #10	ESS2 (ENSNLEG00000005148) #9	ENSNLEG00000030109	SLC25A1 (ENSNLEG00000031202) #12	CLTCL1 (ENSNLEG00000005221) #13	HIRA (ENSNLEG00000005303) #14	MRPL40 (ENSNLEG00000005372) #16	C22orf39 (ENSNLEG00000034195) #15	UFD1 (ENSNLEG00000005378) #17	CDC45 (ENSNLEG00000005423) #18	SEPTIN5 (ENSNLEG00000005511) #20	GP1BB (ENSNLEG00000028896) #21	ENSNLEG00000005519 #22	GNB1L (ENSNLEG00000005524) #23	RTL10 (ENSNLEG00000019209) #24	TXNRD2 (ENSNLEG00000005534) #25	COMT (ENSNLEG00000030236) #26	ARVCF (ENSNLEG00000005621) #27	ENSNLEG00000005635 #28	DGCR8 (ENSNLEG00000005643) #29	TRMT2A (ENSNLEG00000005670) #30	RANBP1 (ENSNLEG00000005684) #31	ZDHHC8 (ENSNLEG00000005693) #32	ENSNLEG00000032706 #33	RTN4R (ENSNLEG00000005706) #34	ENSNLEG00000027550 #35	ENSNLEG00000034901	ENSNLEG00000005737 #36
Cercopithecidae	ANCESTRAL SPECIES	30	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Rhinopithecus	ANCESTRAL SPECIES	187	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00910000147541	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000141073.r.c #31	ENSGT00530000063723.a #30	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34
Golden snub-nosed monkey	MODERN SPECIES	2675																ENSRROG00000042152 #22	GNB1L (ENSRROG00000036236) #23	TXNRD2 (ENSRROG00000000333) #25	COMT (ENSRROG00000044726) #26	ARVCF (ENSRROG00000041949) #27	TANGO2 (ENSRROG00000035026) #28	DGCR8 (ENSRROG00000029948) #29	TRMT2A (ENSRROG00000036706) #30	ENSRROG00000028972 #31	ZDHHC8 (ENSRROG00000008376) #32	CCDC188 (ENSRROG00000034765) #33	ENSRROG00000035329	RTN4R (ENSRROG00000034795) #34
Black snub-nosed monkey	MODERN SPECIES	1862	TSSK2 (ENSRBIG00000022728) #10	ESS2 (ENSRBIG00000039387) #9	GSC2 (ENSRBIG00000042464) #11	ENSRBIG00000031759	SLC25A1 (ENSRBIG00000028644) #12	CLTCL1 (ENSRBIG00000039464) #13	HIRA (ENSRBIG00000028086) #14	MRPL40 (ENSRBIG00000023060) #16	C22orf39 (ENSRBIG00000035936) #15	ENSRBIG00000041874 ##17	ENSRBIG00000031663	CDC45 (ENSRBIG00000038253) #18	CLDN5 (ENSRBIG00000029244) #19	SEPTIN5 (ENSRBIG00000041362) #20	GP1BB (ENSRBIG00000028483) #21	TBX1 (ENSRBIG00000042831) #22	GNB1L (ENSRBIG00000039954) #23	TXNRD2 (ENSRBIG00000029825) #25	COMT (ENSRBIG00000035474) #26	ARVCF (ENSRBIG00000038003) #27	TANGO2 (ENSRBIG00000028257) #28	DGCR8 (ENSRBIG00000015201) #29	TRMT2A (ENSRBIG00000013553) #30	RANBP1 (ENSRBIG00000040239) #31	ZDHHC8 (ENSRBIG00000041762) #32	CCDC188 (ENSRBIG00000035259) #33	ENSRBIG00000043737
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000163200	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Vervet Monkey	MODERN SPECIES	10	ZNF70 (ENSCSAG00000019274)	ENSCSAG00000011457	ENSCSAG00000011465	DGCR2 (ENSCSAG00000011477) #8	TSSK2 (ENSCSAG00000019273) #10	ESS2 (ENSCSAG00000011488) #9	GSC2 (ENSCSAG00000011500) #11	CLTCL1 (ENSCSAG00000011559) #13	HIRA (ENSCSAG00000011583) #14	MRPL40 (ENSCSAG00000011593) #16	C22orf39 (ENSCSAG00000011597) #15	UFD1 (ENSCSAG00000011687) #17	CDC45 (ENSCSAG00000011723) #18	CLDN5 (ENSCSAG00000019272) #19	SEPTIN5 (ENSCSAG00000011732) #20	TBX1 (ENSCSAG00000011818) #22	GNB1L (ENSCSAG00000011917) #23	TXNRD2 (ENSCSAG00000011933) #25	COMT (ENSCSAG00000011940) #26	ARVCF (ENSCSAG00000011970) #27	TANGO2 (ENSCSAG00000011981) #28	DGCR8 (ENSCSAG00000011993) #29	TRMT2A (ENSCSAG00000012001) #30	RANBP1 (ENSCSAG00000012086) #31	ZDHHC8 (ENSCSAG00000012164) #32	CCDC188 (ENSCSAG00000012178) #33	RTN4R (ENSCSAG00000019271) #34	ENSCSAG00000012202 #35	ENSCSAG00000012215	ENSCSAG00000012221	ZNF74 (ENSCSAG00000012224) #36
Cercopithecinae_a	ANCESTRAL SPECIES	26		ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Macaca	ANCESTRAL SPECIES	27	ENSGT00390000006265.b.h #7	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b.g #7
Pig-tailed macaque	MODERN SPECIES	564	ENSMNEG00000040740 #7	ENSMNEG00000042299	DGCR2 (ENSMNEG00000031352) #8	ESS2 (ENSMNEG00000029888) #9	GSC2 (ENSMNEG00000033269) #11	SLC25A1 (ENSMNEG00000032686) #12	CLTCL1 (ENSMNEG00000041306) #13	HIRA (ENSMNEG00000039592) #14	ENSMNEG00000034050 #16	C22orf39 (ENSMNEG00000029659) #15	UFD1 (ENSMNEG00000039946) #17	CDC45 (ENSMNEG00000030243) #18	CLDN5 (ENSMNEG00000027253) #19	SEPTIN5 (ENSMNEG00000036305) #20	GP1BB (ENSMNEG00000037082) #21	TBX1 (ENSMNEG00000012296) #22	GNB1L (ENSMNEG00000042672) #23	TXNRD2 (ENSMNEG00000035876) #25	COMT (ENSMNEG00000022654) #26	ARVCF (ENSMNEG00000031345) #27	TANGO2 (ENSMNEG00000030656) #28	DGCR8 (ENSMNEG00000009733) #29	TRMT2A (ENSMNEG00000039235) #30	RANBP1 (ENSMNEG00000030353) #31	ZDHHC8 (ENSMNEG00000028007) #32	CCDC188 (ENSMNEG00000036140) #33	ENSMNEG00000045533	RTN4R (ENSMNEG00000041125) #34	ENSMNEG00000039558 #35	ENSMNEG00000037360	ZNF74 (ENSMNEG00000032562) #36
Macaca_a	ANCESTRAL SPECIES	23	ENSGT00390000006265.b.h #7	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.a.a #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.a.a ##33	ENSGT00940000160711 #34	ENSGT00390000006265.b.g #7	ENSGT00390000017663.x.b.c #35	ENSGT00940000163677.a.b.a.a.a.a
Rhesus	MODERN SPECIES	1	ENSMMUG00000062702	DGCR2 (ENSMMUG00000019925) #8	TSSK2 (ENSMMUG00000017385) #10	ESS2 (ENSMMUG00000017384) #9	GSC2 (ENSMMUG00000020988) #11	SLC25A1 (ENSMMUG00000005431) #12	CLTCL1 (ENSMMUG00000005432) #13	HIRA (ENSMMUG00000009650) #14	MRPL40 (ENSMMUG00000058871) #16	UFD1 (ENSMMUG00000031106) #17	CDC45 (ENSMMUG00000021904) #18	CLDN5 (ENSMMUG00000060434) #19	ENSMMUG00000064911	GP1BB (ENSMMUG00000040434) #21	SEPTIN5 (ENSMMUG00000017134) #20	TBX1 (ENSMMUG00000017140) #22	GNB1L (ENSMMUG00000017144) #24	TXNRD2 (ENSMMUG00000017147) #25	COMT (ENSMMUG00000054068) #26	ARVCF (ENSMMUG00000017153) #27	TANGO2 (ENSMMUG00000020233) #28	DGCR8 (ENSMMUG00000020098) #29	TRMT2A (ENSMMUG00000020099) #30	RANBP1 (ENSMMUG00000020100) #31	ZDHHC8 (ENSMMUG00000020101) #32	ENSMMUG00000040386 ##33	RTN4R (ENSMMUG00000011547) #34	ENSMMUG00000041787 #7	DGCR6L (ENSMMUG00000000560) #35	ENSMMUG00000050014	ENSMMUG00000053802
Crab-eating macaque	MODERN SPECIES	1	USP18 (ENSMFAG00000002467)	ENSMFAG00000053543 #35	ENSMFAG00000064359 #7	SLC25A1 (ENSMFAG00000035928) #12	ENSMFAG00000065698	CLTCL1 (ENSMFAG00000032523) #13	ENSMFAG00000058504	ENSMFAG00000048274	MRPL40 (ENSMFAG00000032018) #16	HIRA (ENSMFAG00000030575) #14	C22orf39 (ENSMFAG00000040161) #15	UFD1 (ENSMFAG00000040923) #17	CDC45 (ENSMFAG00000045935) #18	SEPTIN5 (ENSMFAG00000038117) #20	ENSMFAG00000061209 #21	TBX1 (ENSMFAG00000045435) #22	GNB1L (ENSMFAG00000045528) #23	RTL10 (ENSMFAG00000033419) #24	TXNRD2 (ENSMFAG00000039502) #25	COMT (ENSMFAG00000030334) #26	ARVCF (ENSMFAG00000038042) #27	TANGO2 (ENSMFAG00000004021) #28	DGCR8 (ENSMFAG00000033708) #29	TRMT2A (ENSMFAG00000038705) #30	RANBP1 (ENSMFAG00000045937) #31	CCDC188 (ENSMFAG00000039335) ##33	ENSMFAG00000062391	RTN4R (ENSMFAG00000002996) #34	ENSMFAG00000036801 #7	ENSMFAG00000042526 #35	ENSMFAG00000064423
Cercopithecinae_b	ANCESTRAL SPECIES	53	ENSGT00940000155637.t	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT01100000263584.a.a	ENSGT00940000162000.d #36	ENSGT00950000183101.b #37
Olive baboon	MODERN SPECIES	7	ENSPANG00000015871	DGCR2 (ENSPANG00000015766) #8	TSSK2 (ENSPANG00000051095) #10	ESS2 (ENSPANG00000001052) #9	GSC2 (ENSPANG00000001053) #11	SLC25A1 (ENSPANG00000049025) #12	CLTCL1 (ENSPANG00000016741) #13	HIRA (ENSPANG00000003895) #14	MRPL40 (ENSPANG00000007370) #16	C22orf39 (ENSPANG00000031229) #15	UFD1 (ENSPANG00000026172) #17	CDC45 (ENSPANG00000000619) #18	CLDN5 (ENSPANG00000000620) #19	ENSPANG00000001023 #20	GP1BB (ENSPANG00000016740) #21	TBX1 (ENSPANG00000015763) #22	RTL10 (ENSPANG00000016401) #24	TXNRD2 (ENSPANG00000010339) #25	COMT (ENSPANG00000006826) #26	ARVCF (ENSPANG00000007369) #27	TANGO2 (ENSPANG00000017418) #28	DGCR8 (ENSPANG00000019987) #29	TRMT2A (ENSPANG00000024085) #30	RANBP1 (ENSPANG00000024087) #31	ZDHHC8 (ENSPANG00000015762) #32	RTN4R (ENSPANG00000019636) #34	ENSPANG00000050477	MED15 (ENSPANG00000024303)	KLHL22 (ENSPANG00000012339)	SCARF2 (ENSPANG00000031361) #37	ZNF74 (ENSPANG00000022560) #36
Cercopithecinae_d	ANCESTRAL SPECIES	110	ENSGT00940000155637.t	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239.j #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D.b #33	ENSGT00550000076205	ENSGT00940000160711 #34	ENSGT01100000263584.a.a	ENSGT00940000162000.d #36	ENSGT00950000183101.b #37
Sooty mangabey	MODERN SPECIES	341	ENSCATG00000034204 #7	ENSCATG00000029709	DGCR2 (ENSCATG00000031705) #8	TSSK2 (ENSCATG00000018506) #10	ESS2 (ENSCATG00000044330) #9	GSC2 (ENSCATG00000035723) #11	CLTCL1 (ENSCATG00000038670) #13	HIRA (ENSCATG00000030278) #14	ENSCATG00000031418 #16	C22orf39 (ENSCATG00000040241) #15	ENSCATG00000042368 ##17	CLDN5 (ENSCATG00000018548) #19	CDC45 (ENSCATG00000032501) #18	SEPTIN5 (ENSCATG00000040593) #20	GP1BB (ENSCATG00000012778) #21	TBX1 (ENSCATG00000040533) #22	GNB1L (ENSCATG00000033605) #23	TXNRD2 (ENSCATG00000039276) #25	COMT (ENSCATG00000026178) #26	ARVCF (ENSCATG00000039904) #27	TANGO2 (ENSCATG00000040168) #28	DGCR8 (ENSCATG00000030676) #29	TRMT2A (ENSCATG00000042218) #30	RANBP1 (ENSCATG00000033471) #31	ZDHHC8 (ENSCATG00000034583) #32	CCDC188 (ENSCATG00000030686) #33	ENSCATG00000044033	RTN4R (ENSCATG00000030255) #34
Drill	MODERN SPECIES	932					DGCR2 (ENSMLEG00000043386) #8	ESS2 (ENSMLEG00000028952) #9	SLC25A1 (ENSMLEG00000039103) #12	CLTCL1 (ENSMLEG00000032739) #13	HIRA (ENSMLEG00000029819) #14	ENSMLEG00000030926 #16	C22orf39 (ENSMLEG00000028236) #15	ENSMLEG00000038529 ##17	CDC45 (ENSMLEG00000040774) #18	CLDN5 (ENSMLEG00000040620) #19	SEPTIN5 (ENSMLEG00000029088) #20	ENSMLEG00000032135 #22	GNB1L (ENSMLEG00000040958) #23	TXNRD2 (ENSMLEG00000042607) #25	COMT (ENSMLEG00000031497) #26	ARVCF (ENSMLEG00000034443) #27	TANGO2 (ENSMLEG00000038944) #28	DGCR8 (ENSMLEG00000030324) #29	TRMT2A (ENSMLEG00000034259) #30	RANBP1 (ENSMLEG00000038738) #31	ZDHHC8 (ENSMLEG00000002618) #32	CCDC188 (ENSMLEG00000032407) #33	ENSMLEG00000038471	RTN4R (ENSMLEG00000042754) #34	ENSMLEG00000030131 ##35	ENSMLEG00000032346	ZNF74 (ENSMLEG00000003487) #36
Platyrrhini	ANCESTRAL SPECIES	51	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.d ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663.x #35	ENSGT00390000017663.w.a ##35	ENSGT00940000161720
Mas night monkey	MODERN SPECIES	760	ENSANAG00000033181	LRRC75B (ENSANAG00000034948)	SNRPD3 (ENSANAG00000026106)	GUCD1 (ENSANAG00000028630)	UPB1 (ENSANAG00000034229)	ENSANAG00000022282	ADORA2A (ENSANAG00000025931)	SPECC1L (ENSANAG00000033753)	HIRA (ENSANAG00000037418) #14	MRPL40 (ENSANAG00000026579) #16	C22orf39 (ENSANAG00000021427) #15	UFD1 (ENSANAG00000031464) ##17	CDC45 (ENSANAG00000034622) #18	SEPTIN5 (ENSANAG00000025950) #20	GP1BB (ENSANAG00000033423) #21	TBX1 (ENSANAG00000024241) #22	GNB1L (ENSANAG00000015533) #23	TXNRD2 (ENSANAG00000020052) #25	COMT (ENSANAG00000024217) #26	ARVCF (ENSANAG00000029182) #27	TANGO2 (ENSANAG00000035133) #28	DGCR8 (ENSANAG00000013710) #29	TRMT2A (ENSANAG00000035461) #30	ENSANAG00000024454 #31	ZDHHC8 (ENSANAG00000032330) #32	CCDC188 (ENSANAG00000028823) #33	RTN4R (ENSANAG00000032599) #34	ENSANAG00000034686 #7	ENSANAG00000025732 #35	ENSANAG00000031012	ENSANAG00000033260
Cebidae	ANCESTRAL SPECIES	44	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.d ##17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663.x #35	ENSGT00390000017663.w.a ##35	ENSGT00940000161720
Marmoset	MODERN SPECIES		TSSK2 (ENSCJAG00000064480) #10	ESS2 (ENSCJAG00000001679) #9	GSC2 (ENSCJAG00000065946) #11	ENSCJAG00000001657 #12	CLTCL1 (ENSCJAG00000047873) #13	ENSCJAG00000022184	HIRA (ENSCJAG00000001591) #14	MRPL40 (ENSCJAG00000001584) #16	ENSCJAG00000044605 #15	UFD1 (ENSCJAG00000001566) ##17	CDC45 (ENSCJAG00000001523) #18	CLDN5 (ENSCJAG00000021820) #19	SEPTIN5 (ENSCJAG00000031147) #20	GP1BB (ENSCJAG00000001520) #21	ENSCJAG00000055379 #35	TBX1 (ENSCJAG00000014591) #22	GNB1L (ENSCJAG00000037354) #23	TXNRD2 (ENSCJAG00000014546) #25	COMT (ENSCJAG00000014538) #26	ARVCF (ENSCJAG00000014479) #27	TANGO2 (ENSCJAG00000010829) #28	DGCR8 (ENSCJAG00000010780) #29	TRMT2A (ENSCJAG00000010758) #30	RANBP1 (ENSCJAG00000010749) #31	ZDHHC8 (ENSCJAG00000010730) #32	CCDC188 (ENSCJAG00000033357) #33	RTN4R (ENSCJAG00000047001) #34	ENSCJAG00000010707 #7	ENSCJAG00000073511 #35	IL17RA (ENSCJAG00000006350)	TMEM121B (ENSCJAG00000047740)
Cebidae_a	ANCESTRAL SPECIES	97	ENSGT00940000159598	ENSGT00730000111140	ENSGT00390000017655 #8	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.o #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408.c.b ##17	ENSGT00390000009662 #18	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073.r #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663.x #35	ENSGT00390000017663.w.a ##35	ENSGT00940000161720
Capuchin	MODERN SPECIES	461	MED15 (ENSCCAG00000036908)	ENSCCAG00000037479	GAB4 (ENSCCAG00000033617)	DGCR2 (ENSCCAG00000030344) #8	ENSCCAG00000019387 #10	ESS2 (ENSCCAG00000021557) #9	GSC2 (ENSCCAG00000027479) #11	SLC25A1 (ENSCCAG00000037876) #12	CLTCL1 (ENSCCAG00000018635) #13	HIRA (ENSCCAG00000025576) #14	MRPL40 (ENSCCAG00000037694) #16	C22orf39 (ENSCCAG00000027208) #15	UFD1 (ENSCCAG00000011104) ##17	CDC45 (ENSCCAG00000032172) #18	SEPTIN5 (ENSCCAG00000036918) #20	TBX1 (ENSCCAG00000027674) #22	GNB1L (ENSCCAG00000019728) #23	TXNRD2 (ENSCCAG00000034707) #25	COMT (ENSCCAG00000033173) #26	ARVCF (ENSCCAG00000036097) #27	TANGO2 (ENSCCAG00000023952) #28	DGCR8 (ENSCCAG00000036620) #29	TRMT2A (ENSCCAG00000025578) #30	RANBP1 (ENSCCAG00000035621) #31	ZDHHC8 (ENSCCAG00000022342) #32	CCDC188 (ENSCCAG00000028855) #33	RTN4R (ENSCCAG00000018734) #34	ENSCCAG00000032010 #7	ENSCCAG00000025633 #35
Bolivian squirrel monkey	MODERN SPECIES	206	MED15 (ENSSBOG00000028827)	KLHL22 (ENSSBOG00000022717)	SCARF2 (ENSSBOG00000021027) #37	ZNF74 (ENSSBOG00000035690) #36	ENSSBOG00000033715	ENSSBOG00000013406	ENSSBOG00000030944	HIRA (ENSSBOG00000021149) #14	ENSSBOG00000013817	MRPL40 (ENSSBOG00000031050) #16	C22orf39 (ENSSBOG00000031146) #15	ENSSBOG00000027274 ##17	CDC45 (ENSSBOG00000018948) #18	SEPTIN5 (ENSSBOG00000027910) #20	GP1BB (ENSSBOG00000034037) #21	ENSSBOG00000003899 #22	GNB1L (ENSSBOG00000029828) #23	TXNRD2 (ENSSBOG00000023176) #25	COMT (ENSSBOG00000032251) #26	ARVCF (ENSSBOG00000024306) #27	TANGO2 (ENSSBOG00000024655) #28	DGCR8 (ENSSBOG00000022975) #29	TRMT2A (ENSSBOG00000024388) #30	ENSSBOG00000035235 #31	ZDHHC8 (ENSSBOG00000027282) #32	CCDC188 (ENSSBOG00000022842) #33	RTN4R (ENSSBOG00000032491) #34	ENSSBOG00000034358 #7	ENSSBOG00000034711 ##35	USP18 (ENSSBOG00000035368)	TUBA8 (ENSSBOG00000021079)
Tarsier	MODERN SPECIES	4717										HIRA (ENSTSYG00000003663) #14	MRPL40 (ENSTSYG00000014747) #16	CUNH22orf39 (ENSTSYG00000028865) #15	UFD1 (ENSTSYG00000014750) #17	CDC45 (ENSTSYG00000014754) #18	SEPT5 (ENSTSYG00000037551) #20	ENSTSYG00000032380 #22	GNB1L (ENSTSYG00000034272) #23	TXNRD2 (ENSTSYG00000028849) #25	COMT (ENSTSYG00000013593) #26	ARVCF (ENSTSYG00000010118) #27	TANGO2 (ENSTSYG00000008824) #28	DGCR8 (ENSTSYG00000027809) #29	TRMT2A (ENSTSYG00000027872) #30	RANBP1 (ENSTSYG00000013573) #31	ZDHHC8 (ENSTSYG00000035973) #32	CCDC188 (ENSTSYG00000027690) #33	RTN4R (ENSTSYG00000029385) #34	ENSTSYG00000027023 #7	ENSTSYG00000031265 #35
Strepsirrhini	ANCESTRAL SPECIES	39	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Lemuriformes	ANCESTRAL SPECIES	57	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Lemuriformes_a	ANCESTRAL SPECIES	140	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b.n #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Coquerels sifaka	MODERN SPECIES	608						ESS2 (ENSPCOG00000026937) #9	ENSPCOG00000027700 #12	CLTCL1 (ENSPCOG00000020137) #13	HIRA (ENSPCOG00000018283) #14	MRPL40 (ENSPCOG00000014413) #16	C22orf39 (ENSPCOG00000005831) #15	UFD1 (ENSPCOG00000024457) #17	CDC45 (ENSPCOG00000024018) #18	SEPTIN5 (ENSPCOG00000012479) #20	GP1BB (ENSPCOG00000022356) #21	TBX1 (ENSPCOG00000020373) #22	GNB1L (ENSPCOG00000025209) #23	TXNRD2 (ENSPCOG00000026009) #25	COMT (ENSPCOG00000021200) #26	ARVCF (ENSPCOG00000021466) #27	TANGO2 (ENSPCOG00000021728) #28	DGCR8 (ENSPCOG00000025377) #29	TRMT2A (ENSPCOG00000015293) #30	RANBP1 (ENSPCOG00000028183) #31	ZDHHC8 (ENSPCOG00000016265) #32	CCDC188 (ENSPCOG00000022639) #33	RTN4R (ENSPCOG00000013486) #34	ENSPCOG00000017029 #7	ENSPCOG00000016489 #35	ENSPCOG00000017222	ENSPCOG00000021220
Greater bamboo lemur	MODERN SPECIES	416														SEPTIN5 (ENSPSMG00000001186) #20	GP1BB (ENSPSMG00000001216) #21	TBX1 (ENSPSMG00000001290) #22	GNB1L (ENSPSMG00000001334) #23	TXNRD2 (ENSPSMG00000001563) #25	COMT (ENSPSMG00000001658) #26	ARVCF (ENSPSMG00000001850) #27	TANGO2 (ENSPSMG00000002263) #28	DGCR8 (ENSPSMG00000002393) #29	TRMT2A (ENSPSMG00000002486) #30	RANBP1 (ENSPSMG00000002572) #31	ZDHHC8 (ENSPSMG00000002679) #32	CCDC188 (ENSPSMG00000002830) #33	RTN4R (ENSPSMG00000002832) #34	ENSPSMG00000002892 #7	ENSPSMG00000003012 #35
Mouse lemur	MODERN SPECIES	131	ZNF74 (ENSMICG00000032821) #36	DGCR2 (ENSMICG00000011635) #8	TSSK2 (ENSMICG00000008686) #10	ESS2 (ENSMICG00000000068) #9	GSC2 (ENSMICG00000043796) #11	SLC25A1 (ENSMICG00000017090) #12	ENSMICG00000026758	HIRA (ENSMICG00000013496) #14	MRPL40 (ENSMICG00000046066) #16	C22orf39 (ENSMICG00000013560) #15	UFD1 (ENSMICG00000013566) #17	CDC45 (ENSMICG00000013589) #18	ENSMICG00000034772	SEPTIN5 (ENSMICG00000028407) #20	GP1BB (ENSMICG00000043691) #21	TBX1 (ENSMICG00000028907) #22	GNB1L (ENSMICG00000034017) #23	TXNRD2 (ENSMICG00000016540) #25	COMT (ENSMICG00000015309) #26	ARVCF (ENSMICG00000015322) #27	TANGO2 (ENSMICG00000005166) #28	DGCR8 (ENSMICG00000030145) #29	TRMT2A (ENSMICG00000017621) #30	RANBP1 (ENSMICG00000017622) #31	ZDHHC8 (ENSMICG00000037526) #32	CCDC188 (ENSMICG00000032879) #33	RTN4R (ENSMICG00000027043) #34	ENSMICG00000004016 #7	ENSMICG00000035160 #35
Bushbaby	MODERN SPECIES	333	ZNF74 (ENSOGAG00000025857) #36	DGCR2 (ENSOGAG00000001352) #8	TSSK1B (ENSOGAG00000032224)	TSSK2 (ENSOGAG00000007948) #10	ESS2 (ENSOGAG00000007950) #9	GSC2 (ENSOGAG00000029019) #11	SLC25A1 (ENSOGAG00000001361) #12	CLTCL1 (ENSOGAG00000001362) #13	HIRA (ENSOGAG00000015079) #14	MRPL40 (ENSOGAG00000030071) #16	C22orf39 (ENSOGAG00000015092) #15	UFD1 (ENSOGAG00000015095) #17	CDC45 (ENSOGAG00000015102) #18	CLDN5 (ENSOGAG00000024947) #19	SEPTIN5 (ENSOGAG00000026834) #20	TBX1 (ENSOGAG00000003596) #22	GNB1L (ENSOGAG00000024293) #23	TXNRD2 (ENSOGAG00000029571) #25	ENSOGAG00000026719 #26	ARVCF (ENSOGAG00000007097) #27	TANGO2 (ENSOGAG00000004850) #28	DGCR8 (ENSOGAG00000004851) #29	TRMT2A (ENSOGAG00000009941) #30	RANBP1 (ENSOGAG00000034333) #31	ZDHHC8 (ENSOGAG00000027995) #32	ENSOGAG00000029421 #33	RTN4R (ENSOGAG00000033465) #34	ENSOGAG00000014819 #7	ENSOGAG00000014817 #35
Euarchontoglires_A	ANCESTRAL SPECIES	18	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Glires	ANCESTRAL SPECIES	19	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Rodentia	ANCESTRAL SPECIES	20	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Rodentia_B	ANCESTRAL SPECIES	44	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Myomorpha	ANCESTRAL SPECIES	65								ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Muroidea	ANCESTRAL SPECIES	61								ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00530000063947.B	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000154345.b	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000154345.b	ENSGT00940000163715.a	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00940000159676	ENSGT00950000182899.C.a	ENSGT01090000259995.b.b.a.a.a.h.a.a.b	ENSGT01090000259995.b.b.b	ENSGT01090000259995.b.b.a.a.b	ENSGT01090000259995.b.b.a.a.a.g	ENSGT01090000259995.b.a.a.a.a.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Northern American deer mouse	MODERN SPECIES	3	ENSPEMG00000027859	ENSPEMG00000028476	ENSPEMG00000026643	ENSPEMG00000030529	ENSPEMG00000026657	ENSPEMG00000027648	ENSPEMG00000026621	ENSPEMG00000011377 #14	Mrpl40 (ENSPEMG00000017933) #16	2510002D24Rik (ENSPEMG00000003609) #15	Ufd1 (ENSPEMG00000011595) #17	Cdc45 (ENSPEMG00000004377) #18	Cldn5 (ENSPEMG00000000920) #19	Septin5 (ENSPEMG00000013636) #20	Gp1bb (ENSPEMG00000016143) #21	Tbx1 (ENSPEMG00000005836) #22	Gnb1l (ENSPEMG00000009247) #23	ENSPEMG00000030443 #26	Txnrd2 (ENSPEMG00000000594) #25	ENSPEMG00000024477 #26	Arvcf (ENSPEMG00000014202) #27	Tango2 (ENSPEMG00000012488) #28	Dgcr8 (ENSPEMG00000018266) #29	ENSPEMG00000019211	Trmt2a (ENSPEMG00000011013) #30	Ranbp1 (ENSPEMG00000019257) #31	Zdhhc8 (ENSPEMG00000012434) #32	ENSPEMG00000005605 #33	Rtn4r (ENSPEMG00000014362) #34	Prodh (ENSPEMG00000005099) #7	Dgcr6 (ENSPEMG00000012492) #35
Prairie vole	MODERN SPECIES	151														Septin5 (ENSMOCG00000000071) #20	Gp1bb (ENSMOCG00000019806) #21	Tbx1 (ENSMOCG00000014698) #22	Gnb1l (ENSMOCG00000001278) #23	ENSMOCG00000004002	Txnrd2 (ENSMOCG00000000725) #25	Comt (ENSMOCG00000012717) #26	Arvcf (ENSMOCG00000014542) #27	Tango2 (ENSMOCG00000008779) #28	Dgcr8 (ENSMOCG00000014743) #29	Trmt2a (ENSMOCG00000002597) #30	Ranbp1 (ENSMOCG00000000658) #31	Zdhhc8 (ENSMOCG00000012177) #32	ENSMOCG00000017067 #33	Rtn4r (ENSMOCG00000018155) #34	Prodh (ENSMOCG00000019417) #7	Dgcr6 (ENSMOCG00000020153) #35	ENSMOCG00000010728
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00530000063947.B	ENSGT00940000156789	ENSGT00940000154345.a	ENSGT00940000163715.a	ENSGT00990000203899	ENSGT00940000159676	ENSGT00940000164015	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Chinese hamster chok1gshd	MODERN SPECIES	382	Or2l5 (ENSCGRG00001002256)	ENSCGRG00001005083	ENSCGRG00001001770	ENSCGRG00001002027	ENSCGRG00001002357	ENSCGRG00001010395	ENSCGRG00001009833	Hira (ENSCGRG00001019509) #14	Mrpl40 (ENSCGRG00001019957) #16	2510002D24Rik (ENSCGRG00001013807) #15	ENSCGRG00001016282 #17	Cdc45 (ENSCGRG00001017733) #18	Cldn5 (ENSCGRG00001010860) #19	Septin5 (ENSCGRG00001018409) #20	Gp1bb (ENSCGRG00001011927) #21	Tbx1 (ENSCGRG00001018936) #22	Gnb1l (ENSCGRG00001011168) #23	Txnrd2 (ENSCGRG00001018147) #25	Comt (ENSCGRG00001019692) #26	Arvcf (ENSCGRG00001008113) #27	Tango2 (ENSCGRG00001012308) #28	Dgcr8 (ENSCGRG00001000935) #29	ENSCGRG00001010886	Trmt2a (ENSCGRG00001016592) #30	Ranbp1 (ENSCGRG00001019070) #31	Zdhhc8 (ENSCGRG00001015576) #32	ENSCGRG00001012235 #33	Rtn4r (ENSCGRG00001002500) #34	Prodh (ENSCGRG00001012080) #7	Dgcr6 (ENSCGRG00001004677) #35	Slc25a1 (ENSCGRG00001024096) #12
Golden Hamster	MODERN SPECIES	690	Slc7a11 (ENSMAUG00000015486)	Pcdh18 (ENSMAUG00000008607)	Pkp2 (ENSMAUG00000010450)	Yars2 (ENSMAUG00000012334)	Dnm1l (ENSMAUG00000010409)	Fgd4 (ENSMAUG00000009523)	Mzt2 (ENSMAUG00000011034)	Hira (ENSMAUG00000013816) #14	Mrpl40 (ENSMAUG00000015350) #16	2510002D24Rik (ENSMAUG00000006315) #15	Ufd1 (ENSMAUG00000011444) #17	Cdc45 (ENSMAUG00000014100) #18	Cldn5 (ENSMAUG00000017811) #19	Septin5 (ENSMAUG00000014786) #20	Gp1bb (ENSMAUG00000016778) #21	Tbx1 (ENSMAUG00000019560) #22	Gnb1l (ENSMAUG00000000218) #23	ENSMAUG00000016392	Txnrd2 (ENSMAUG00000001013) #25	Comt (ENSMAUG00000013288) #26	Arvcf (ENSMAUG00000010039) #27	Tango2 (ENSMAUG00000019754) #28	Dgcr8 (ENSMAUG00000000517) #29	Trmt2a (ENSMAUG00000005655) #30	Ranbp1 (ENSMAUG00000000530) #31	Zdhhc8 (ENSMAUG00000000570) #32	ENSMAUG00000001223 #33	Rtn4r (ENSMAUG00000004777) #34	Prodh (ENSMAUG00000013845) #7	Dgcr6 (ENSMAUG00000017452) #35	ENSMAUG00000018193
Murinae	ANCESTRAL SPECIES	13	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781	ENSGT00940000161640	ENSGT00940000153120.k.a.a	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00550000074856 #12
Mus	ANCESTRAL SPECIES	13	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00950000186516	ENSGT00950000186499	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511.a #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Mus_A	ANCESTRAL SPECIES	18	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781	ENSGT00950000186516	ENSGT00940000153307.d.b	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511.a #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Ryukyu mouse	MODERN SPECIES	7	MGP_CAROLIEiJ_G0020560	Or2m12 (MGP_CAROLIEiJ_G0020559)	Iglj4 (MGP_CAROLIEiJ_G0000023)	Iglc4 (MGP_CAROLIEiJ_G0000011)	Iglj1 (MGP_CAROLIEiJ_G0000022)	Iglc1 (MGP_CAROLIEiJ_G0000010)	MGP_CAROLIEiJ_G0020558 #14	Mrpl40 (MGP_CAROLIEiJ_G0020557) #16	MGP_CAROLIEiJ_G0020556 #15	2510002D24Rik (MGP_CAROLIEiJ_G0020555) #15	Ufd1 (MGP_CAROLIEiJ_G0020554) #17	Cdc45 (MGP_CAROLIEiJ_G0020553) #18	Cldn5 (MGP_CAROLIEiJ_G0020552) #19	Septin5 (MGP_CAROLIEiJ_G0020551) #20	Gp1bb (MGP_CAROLIEiJ_G0020550) #21	Tbx1 (MGP_CAROLIEiJ_G0020549) #22	MGP_CAROLIEiJ_G0020548	MGP_CAROLIEiJ_G0020547 #23	Txnrd2 (MGP_CAROLIEiJ_G0020546) #25	Comt (MGP_CAROLIEiJ_G0020545) #26	Arvcf (MGP_CAROLIEiJ_G0020544) #27	MGP_CAROLIEiJ_G0020543 #28	Dgcr8 (MGP_CAROLIEiJ_G0020542) #29	Trmt2a (MGP_CAROLIEiJ_G0020541) #30	Ranbp1 (MGP_CAROLIEiJ_G0020540) #31	Zdhhc8 (MGP_CAROLIEiJ_G0020539) #32	MGP_CAROLIEiJ_G0020538 #33	Rtn4r (MGP_CAROLIEiJ_G0020537) #34	Prodh (MGP_CAROLIEiJ_G0020536) #7	Dgcr6 (MGP_CAROLIEiJ_G0020535) #35	Slc25a1 (MGP_CAROLIEiJ_G0020534) #12
Mus_B	ANCESTRAL SPECIES	18	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00940000163781.i	ENSGT00940000153934.a.a	ENSGT00940000153307.d.b.b	ENSGT00950000186516	ENSGT00940000153307.d.b.a	ENSGT00940000153307.d.a.a	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511.a #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Mouse	MODERN SPECIES	7	Iglv1 (ENSMUSG00000076934)	Iglj3 (ENSMUSG00000105231)	Iglj3p (ENSMUSG00000106405)	Iglc3 (ENSMUSG00000105547)	Iglj1 (ENSMUSG00000106668)	Iglc1 (ENSMUSG00000105906)	Hira (ENSMUSG00000022702) #14	Mrpl40 (ENSMUSG00000022706) #16	2510002D24Rik (ENSMUSG00000071632) #15	Ufd1 (ENSMUSG00000005262) #17	Cdc45 (ENSMUSG00000000028) #18	Cldn5 (ENSMUSG00000041378) #19	Septin5 (ENSMUSG00000072214) #20	Gm49601 (ENSMUSG00000116594)	Gp1bb (ENSMUSG00000050761) #21	Tbx1 (ENSMUSG00000009097) #22	Gnb1l (ENSMUSG00000000884) #23	Txnrd2 (ENSMUSG00000075704) #25	Comt (ENSMUSG00000000326) #26	Arvcf (ENSMUSG00000118669) #27	Tango2 (ENSMUSG00000013539) #28	Dgcr8 (ENSMUSG00000022718) #29	Trmt2a (ENSMUSG00000022721) #30	Ranbp1 (ENSMUSG00000005732) #31	Zdhhc8 (ENSMUSG00000060166) #32	Ccdc188 (ENSMUSG00000090777) #33	Rtn4r (ENSMUSG00000043811) #34	Prodh (ENSMUSG00000003526) #7	Dgcr6 (ENSMUSG00000003531) #35	Vpreb1b (ENSMUSG00000059280)	Slc25a1 (ENSMUSG00000003528) #12
Mus_C	ANCESTRAL SPECIES	12	ENSGT01090000259995.b.b.a.a.b	ENSGT01090000259995.b.b.a.a.a.i	ENSGT01090000259995.b.a.a.a.a.a.a.h	ENSGT01090000259995.b.a.a.a.a.a.a.g	ENSGT00950000186516	ENSGT00950000186499	ENSGT00940000153307.d.a.b	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511.a #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000167732	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
spretus	MODERN SPECIES	7	MGP_SPRETEiJ_G0000072	Or2m12 (MGP_SPRETEiJ_G0021454)	Iglj1 (MGP_SPRETEiJ_G0000024)	Iglj4 (MGP_SPRETEiJ_G0000023)	MGP_SPRETEiJ_G0000011	MGP_SPRETEiJ_G0000010	Hira (MGP_SPRETEiJ_G0021453) #14	Mrpl40 (MGP_SPRETEiJ_G0021452) #16	MGP_SPRETEiJ_G0021451 #15	MGP_SPRETEiJ_G0021450	Ufd1 (MGP_SPRETEiJ_G0021449) #17	Cldn5 (MGP_SPRETEiJ_G0021448) #19	Cdc45 (MGP_SPRETEiJ_G0021447) #18	Septin5 (MGP_SPRETEiJ_G0021446) #20	Gp1bb (MGP_SPRETEiJ_G0021445) #21	Tbx1 (MGP_SPRETEiJ_G0021444) #22	MGP_SPRETEiJ_G0021443	MGP_SPRETEiJ_G0021442 #23	Txnrd2 (MGP_SPRETEiJ_G0021441) #25	Comt (MGP_SPRETEiJ_G0021440) #26	Arvcf (MGP_SPRETEiJ_G0021439) #27	Tango2 (MGP_SPRETEiJ_G0021438) #28	Dgcr8 (MGP_SPRETEiJ_G0021437) #29	Trmt2a (MGP_SPRETEiJ_G0021436) #30	Ranbp1 (MGP_SPRETEiJ_G0021435) #31	Zdhhc8 (MGP_SPRETEiJ_G0021434) #32	MGP_SPRETEiJ_G0021433 #33	Rtn4r (MGP_SPRETEiJ_G0021432) #34	Prodh (MGP_SPRETEiJ_G0021431) #7	Dgcr6 (MGP_SPRETEiJ_G0021430) #35	Slc25a1 (MGP_SPRETEiJ_G0021429) #12
Steppe mouse	MODERN SPECIES	3260			Iglc3 (ENSMSIG00000023001)	ENSMSIG00000022991	ENSMSIG00000022974	Hira (ENSMSIG00000022901) #14	Mrpl40 (ENSMSIG00000022880) #16	2510002D24Rik (ENSMSIG00000022858) #15	Ufd1 (ENSMSIG00000022828) #17	Cdc45 (ENSMSIG00000022750) #18	Cldn5 (ENSMSIG00000022737) #19	ENSMSIG00000022731	ENSMSIG00000022717	Septin5 (ENSMSIG00000022599) #20	Gp1bb (ENSMSIG00000022590) #21	ENSMSIG00000022581 #22	Gnb1l (ENSMSIG00000022539) #23	Txnrd2 (ENSMSIG00000020857) #25	Comt (ENSMSIG00000020818) #26	Arvcf (ENSMSIG00000020598) #27	Tango2 (ENSMSIG00000020557) #28	Dgcr8 (ENSMSIG00000020457) #29	ENSMSIG00000020450	Trmt2a (ENSMSIG00000020306) #30	ENSMSIG00000020271 #31	Zdhhc8 (ENSMSIG00000020222) #32	Ccdc188 (ENSMSIG00000020194) #33	Rtn4r (ENSMSIG00000020177) #34	Prodh (ENSMSIG00000020147) #7	Dgcr6 (ENSMSIG00000020095) #35	ENSMSIG00000020089
Shrew mouse	MODERN SPECIES	3	MGP_PahariEiJ_G0016265	Or2m12 (MGP_PahariEiJ_G0016264)	MGP_PahariEiJ_G0000019	MGP_PahariEiJ_G0000018	MGP_PahariEiJ_G0000004	MGP_PahariEiJ_G0000003	Hira (MGP_PahariEiJ_G0016263) #14	Mrpl40 (MGP_PahariEiJ_G0016262) #16	MGP_PahariEiJ_G0016261 #15	2510002D24Rik (MGP_PahariEiJ_G0016260) #15	Ufd1 (MGP_PahariEiJ_G0016259) #17	Cdc45 (MGP_PahariEiJ_G0016258) #18	Cldn5 (MGP_PahariEiJ_G0016257) #19	Septin5 (MGP_PahariEiJ_G0016256) #20	Gp1bb (MGP_PahariEiJ_G0016255) #21	Tbx1 (MGP_PahariEiJ_G0016254) #22	MGP_PahariEiJ_G0016253	MGP_PahariEiJ_G0016252 #23	Txnrd2 (MGP_PahariEiJ_G0016251) #25	Comt (MGP_PahariEiJ_G0016250) #26	Arvcf (MGP_PahariEiJ_G0016249) #27	MGP_PahariEiJ_G0016248 #28	Dgcr8 (MGP_PahariEiJ_G0016247) #29	Trmt2a (MGP_PahariEiJ_G0016246) #30	Ranbp1 (MGP_PahariEiJ_G0016245) #31	Zdhhc8 (MGP_PahariEiJ_G0016244) #32	MGP_PahariEiJ_G0016243 #33	Rtn4r (MGP_PahariEiJ_G0016242) #34	Prodh (MGP_PahariEiJ_G0016241) #7	Dgcr6 (MGP_PahariEiJ_G0016240) #35	Slc25a1 (MGP_PahariEiJ_G0016239) #12
Rat	MODERN SPECIES	2	ENSRNOG00000069898	ENSRNOG00000069249	ENSRNOG00000064589	RGD1564318 (ENSRNOG00000050000)	ENSRNOG00000070540	Iglc1 (ENSRNOG00000058590)	Hira (ENSRNOG00000045770) #14	Mrpl40 (ENSRNOG00000049686) #16	LOC498122 (ENSRNOG00000048861)	Ufd1 (ENSRNOG00000047394) #17	Cdc45 (ENSRNOG00000070046) #18	Cdc45 (ENSRNOG00000050071) #19	LOC100362453 (ENSRNOG00000001893)	Septin5 (ENSRNOG00000029912) #20	Gp1bb (ENSRNOG00000046981) #21	Tbx1 (ENSRNOG00000001892) #22	Gnb1l (ENSRNOG00000001891) #23	Txnrd2 (ENSRNOG00000001890) #25	Comt (ENSRNOG00000001889) #26	Arvcf (ENSRNOG00000001888) #27	Tango2 (ENSRNOG00000030245) #28	Dgcr8 (ENSRNOG00000001886) #29	Trmt2a (ENSRNOG00000001885) #30	ENSRNOG00000066515	Ranbp1 (ENSRNOG00000001884) #31	Zdhhc8 (ENSRNOG00000021891) #32	Ccdc188 (ENSRNOG00000042711) #33	Rtn4r (ENSRNOG00000030920) #34	Prodh (ENSRNOG00000000281) #7	Dgcr6 (ENSRNOG00000001880) #35	Vpreb2 (ENSRNOG00000001839)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1216								Hira (ENSNGAG00000001112) #14	Mrpl40 (ENSNGAG00000000304) #16	2510002D24Rik (ENSNGAG00000000172) #15	Ufd1 (ENSNGAG00000017827) #17	Cdc45 (ENSNGAG00000015793) #18	Cldn5 (ENSNGAG00000012973) #19	Septin5 (ENSNGAG00000013782) #20	Gp1bb (ENSNGAG00000013250) #21	Tbx1 (ENSNGAG00000013088) #22	Gnb1l (ENSNGAG00000012919) #23	Txnrd2 (ENSNGAG00000012955) #25	Comt (ENSNGAG00000007480) #26	Arvcf (ENSNGAG00000012527) #27	Tango2 (ENSNGAG00000010731) #28	Dgcr8 (ENSNGAG00000003283) #29	Trmt2a (ENSNGAG00000015041) #30	Ranbp1 (ENSNGAG00000013821) #31	Zdhhc8 (ENSNGAG00000012851) #32	ENSNGAG00000012719 #33	Rtn4r (ENSNGAG00000012587) #34	Prodh (ENSNGAG00000011182) #7	Dgcr6 (ENSNGAG00000009889) #35	ENSNGAG00000009497	ENSNGAG00000008705
Lesser Egyptian jerboa	MODERN SPECIES	194	Ypel1 (ENSJJAG00000022948)	ENSJJAG00000022883	Mapk1 (ENSJJAG00000022565)	Ppm1f (ENSJJAG00000019897)	Top3b (ENSJJAG00000019346)	ENSJJAG00000019063	Hira (ENSJJAG00000018442) #14	Mrpl40 (ENSJJAG00000017905) #16	2510002D24Rik (ENSJJAG00000017728) #15	Ufd1 (ENSJJAG00000016109) #17	Cdc45 (ENSJJAG00000015106) #18	Cldn5 (ENSJJAG00000013151) #19	ENSJJAG00000013111	Septin5 (ENSJJAG00000000091) #20	Gp1bb (ENSJJAG00000023646) #21	Tbx1 (ENSJJAG00000023527) #22	Gnb1l (ENSJJAG00000023212) #23	Txnrd2 (ENSJJAG00000019775) #25	Comt (ENSJJAG00000017314) #26	Arvcf (ENSJJAG00000015525) #27	Tango2 (ENSJJAG00000014545) #28	Dgcr8 (ENSJJAG00000014171) #29	Trmt2a (ENSJJAG00000013116) #30	ENSJJAG00000011468 #31	Zdhhc8 (ENSJJAG00000010431) #32	ENSJJAG00000018048 #33	Rtn4r (ENSJJAG00000017834) #34	Prodh (ENSJJAG00000017416) #7	Dgcr6 (ENSJJAG00000014265) #35
Rodentia_A	ANCESTRAL SPECIES	19	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Sciuridae	ANCESTRAL SPECIES	42	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Marmotini	ANCESTRAL SPECIES	53	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #24	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Marmotini_b	ANCESTRAL SPECIES	54	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #24	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000235464
Arctic ground squirrel	MODERN SPECIES	252	DGCR2 (ENSUPAG00010011875) #8	TSSK1B (ENSUPAG00010011872)	TSSK2 (ENSUPAG00010011870) #10	ESS2 (ENSUPAG00010011854) #9	GSC2 (ENSUPAG00010011849) #11	SLC25A1 (ENSUPAG00010011833) #12	CLTCL1 (ENSUPAG00010011775) #13	HIRA (ENSUPAG00010011725) #14	MRPL40 (ENSUPAG00010011716) #16	C22orf39 (ENSUPAG00010011693) #15	UFD1 (ENSUPAG00010011672) #17	CDC45 (ENSUPAG00010011643) #18	CLDN5 (ENSUPAG00010011641) #19	GP1BB (ENSUPAG00010011635) #21	SEPTIN5 (ENSUPAG00010011595) #20	TBX1 (ENSUPAG00010011554) #22	RTL10 (ENSUPAG00010011551) #24	ENSUPAG00010011513 #23	TXNRD2 (ENSUPAG00010011325) #25	COMT (ENSUPAG00010011294) #26	ARVCF (ENSUPAG00010011258) #27	TANGO2 (ENSUPAG00010011235) #28	DGCR8 (ENSUPAG00010011207) #29	TRMT2A (ENSUPAG00010011153) #30	ENSUPAG00010011129	ZDHHC8 (ENSUPAG00010011116) #32	ENSUPAG00010011111 #33	RTN4R (ENSUPAG00010011108) #34	ENSUPAG00010011098 #7	ENSUPAG00010011090 #35	ENSUPAG00010011089
Squirrel	MODERN SPECIES	219	TSSK1B (ENSSTOG00000027168)	TSSK2 (ENSSTOG00000027876) #10	ESS2 (ENSSTOG00000002817) #9	GSC2 (ENSSTOG00000021301) #11	SLC25A1 (ENSSTOG00000002825) #12	CLTCL1 (ENSSTOG00000002838) #13	HIRA (ENSSTOG00000002864) #14	MRPL40 (ENSSTOG00000002887) #16	C22orf39 (ENSSTOG00000023959) #15	UFD1 (ENSSTOG00000002896) #17	CDC45 (ENSSTOG00000002917) #18	CLDN5 (ENSSTOG00000023943) #19	ENSSTOG00000019936	SEPTIN5 (ENSSTOG00000010725) #20	GP1BB (ENSSTOG00000028299) #21	TBX1 (ENSSTOG00000004505) #22	GNB1L (ENSSTOG00000022761) #23	ENSSTOG00000022331	TXNRD2 (ENSSTOG00000011425) #25	ENSSTOG00000019977	COMT (ENSSTOG00000027573) #26	ARVCF (ENSSTOG00000014869) #27	TANGO2 (ENSSTOG00000014461) #28	DGCR8 (ENSSTOG00000023936) #29	TRMT2A (ENSSTOG00000014487) #30	ENSSTOG00000026840 #31	ZDHHC8 (ENSSTOG00000021349) #32	ENSSTOG00000023515 #33	RTN4R (ENSSTOG00000021308) #34	ENSSTOG00000006384 #7	ENSSTOG00000006363 #35
Alpin marmot	MODERN SPECIES	67	DGCR2 (ENSMMMG00000002630) #8	TSSK1B (ENSMMMG00000002708)	TSSK2 (ENSMMMG00000002712) #10	ESS2 (ENSMMMG00000002719) #9	GSC2 (ENSMMMG00000002737) #11	SLC25A1 (ENSMMMG00000002744) #12	CLTCL1 (ENSMMMG00000002805) #13	HIRA (ENSMMMG00000003121) #14	MRPL40 (ENSMMMG00000003198) #16	C22orf39 (ENSMMMG00000003206) #15	UFD1 (ENSMMMG00000003233) #17	CDC45 (ENSMMMG00000003340) #18	CLDN5 (ENSMMMG00000003401) #19	SEPTIN5 (ENSMMMG00000003410) #20	GP1BB (ENSMMMG00000003456) #21	TBX1 (ENSMMMG00000003469) #22	GNB1L (ENSMMMG00000003491) #23	RTL10 (ENSMMMG00000003536) #24	ENSMMMG00000003551	TXNRD2 (ENSMMMG00000003687) #25	COMT (ENSMMMG00000004274) #26	ENSMMMG00000004301	ARVCF (ENSMMMG00000004311) #27	ENSMMMG00000004324 #27	TANGO2 (ENSMMMG00000004334) #28	DGCR8 (ENSMMMG00000004386) #29	TRMT2A (ENSMMMG00000004427) #30	ENSMMMG00000004537	RANBP1 (ENSMMMG00000004542) #31	ZDHHC8 (ENSMMMG00000004564) #32	CCDC188 (ENSMMMG00000004585) #33
Eurasian red squirrel	MODERN SPECIES	17	TSSK2 (ENSSVLG00005009517) #10	ESS2 (ENSSVLG00005009535) #9	GSC2 (ENSSVLG00005009577) #11	SLC25A1 (ENSSVLG00005009628) #12	CLTCL1 (ENSSVLG00005009761) #13	ENSSVLG00005009831	HIRA (ENSSVLG00005009905) #14	MRPL40 (ENSSVLG00005010046) #16	C22orf39 (ENSSVLG00005010097) #15	ENSSVLG00005010133 #17	CDC45 (ENSSVLG00005010179) #18	CLDN5 (ENSSVLG00005007073) #19	ENSSVLG00005007086	SEPTIN5 (ENSSVLG00005007153) #20	GP1BB (ENSSVLG00005007231) #21	TBX1 (ENSSVLG00005007283) #22	GNB1L (ENSSVLG00005007359) #23	RTL10 (ENSSVLG00005007389) #24	TXNRD2 (ENSSVLG00005007580) #25	COMT (ENSSVLG00005008169) #26	ARVCF (ENSSVLG00005008262) #27	TANGO2 (ENSSVLG00005008385) #28	DGCR8 (ENSSVLG00005008519) #29	TRMT2A (ENSSVLG00005008593) #30	RANBP1 (ENSSVLG00005008780) #31	ZDHHC8 (ENSSVLG00005008895) #32	CCDC188 (ENSSVLG00005008983) #33	RTN4R (ENSSVLG00005009047) #34	ENSSVLG00005009088 #7	ENSSVLG00005009216 #35	ENSSVLG00005009313
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000162280	ENSGT00940000159978
Naked mole-rat female	MODERN SPECIES	15	ENSHGLG00000047108	ENSHGLG00000002228	ENSHGLG00000037724	ENSHGLG00000047283	ENSHGLG00000009422	ENSHGLG00000013734	ENSHGLG00000010841 #14	MRPL40 (ENSHGLG00000039126) #16	C22orf39 (ENSHGLG00000035091) #15	ENSHGLG00000014850 #17	CDC45 (ENSHGLG00000015159) #18	CLDN5 (ENSHGLG00000046656) #19	ENSHGLG00000015729	SEPTIN5 (ENSHGLG00000013741) #20	GP1BB (ENSHGLG00000016759) #21	TBX1 (ENSHGLG00000016334) #22	GNB1L (ENSHGLG00000016380) #23	TXNRD2 (ENSHGLG00000018271) #25	COMT (ENSHGLG00000008056) #26	ARVCF (ENSHGLG00000011341) #27	ENSHGLG00000017694 #28	DGCR8 (ENSHGLG00000016999) #29	ENSHGLG00000040825	RANBP1 (ENSHGLG00000006504) #31	ENSHGLG00000038269 #32	ENSHGLG00000036999 #32	CCDC188 (ENSHGLG00000041985) #33	ENSHGLG00000049857 #35	ENSHGLG00000009015 #7	ENSHGLG00000006917	ENSHGLG00000035576
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000159978	ENSGT00950000183203.d.h
Guinea pig	MODERN SPECIES	4	KLHL22 (ENSCPOG00000024005)	SCARF2 (ENSCPOG00000027465) #37	DGCR2 (ENSCPOG00000002706) #8	ESS2 (ENSCPOG00000004596) #9	GSC2 (ENSCPOG00000015708) #11	SLC25A1 (ENSCPOG00000001754) #12	CLTCL1 (ENSCPOG00000002261) #13	HIRA (ENSCPOG00000002264) #14	MRPL40 (ENSCPOG00000026802) #16	C22orf39 (ENSCPOG00000039279) #15	UFD1 (ENSCPOG00000002267) #17	CDC45 (ENSCPOG00000002270) #18	CLDN5 (ENSCPOG00000002274) #19	SEPTIN5 (ENSCPOG00000010483) #20	GP1BB (ENSCPOG00000021659) #21	TBX1 (ENSCPOG00000012532) #22	GNB1L (ENSCPOG00000020237) #23	TXNRD2 (ENSCPOG00000011013) #25	COMT (ENSCPOG00000004445) #26	ARVCF (ENSCPOG00000014606) #27	TANGO2 (ENSCPOG00000002949) #28	DGCR8 (ENSCPOG00000002952) #29	ENSCPOG00000040089	TRMT2A (ENSCPOG00000002959) #30	RANBP1 (ENSCPOG00000030388) #31	ZDHHC8 (ENSCPOG00000000580) #32	ENSCPOG00000033882 #33	RTN4R (ENSCPOG00000020767) #34	ENSCPOG00000021534 #7	ENSCPOG00000001902 #35	HIC2 (ENSCPOG00000001134)
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000159978	ENSGT00950000183203.d.h
Degu	MODERN SPECIES	62	SCARF2 (ENSODEG00000016305) #37	ENSODEG00000016287	DGCR2 (ENSODEG00000016687) #8	ENSODEG00000020381	ENSODEG00000016401 #9	SLC25A1 (ENSODEG00000016493) #12	CLTCL1 (ENSODEG00000016517) #13	HIRA (ENSODEG00000016444) #14	MRPL40 (ENSODEG00000017051) #16	C22orf39 (ENSODEG00000017124) #15	ENSODEG00000016396 #17	CDC45 (ENSODEG00000016658) #18	CLDN5 (ENSODEG00000020395) #19	SEPTIN5 (ENSODEG00000016498) #20	GP1BB (ENSODEG00000016559) #21	TBX1 (ENSODEG00000016676) #22	GNB1L (ENSODEG00000016226) #23	TXNRD2 (ENSODEG00000016336) #25	COMT (ENSODEG00000016382) #26	ARVCF (ENSODEG00000016204) #27	TANGO2 (ENSODEG00000016106) #28	DGCR8 (ENSODEG00000016402) #29	TRMT2A (ENSODEG00000016053) #30	ENSODEG00000015935 #31	ZDHHC8 (ENSODEG00000016037) #32	ENSODEG00000015917 #33	RTN4R (ENSODEG00000015875) #34	ENSODEG00000016154 #7	ENSODEG00000015809 #35	HIC2 (ENSODEG00000016054)	ENSODEG00000015829
Long-tailed chinchilla	MODERN SPECIES	149	ZNF74 (ENSCLAG00000015439) #36	ENSCLAG00000017009	DGCR2 (ENSCLAG00000014962) #8	ESS2 (ENSCLAG00000015255) #9	GSC2 (ENSCLAG00000016210) #11	SLC25A1 (ENSCLAG00000016306) #12	CLTCL1 (ENSCLAG00000016811) #13	HIRA (ENSCLAG00000015724) #14	MRPL40 (ENSCLAG00000016629) #16	C22orf39 (ENSCLAG00000016842) #15	UFD1 (ENSCLAG00000015265) #17	CDC45 (ENSCLAG00000015752) #18	CLDN5 (ENSCLAG00000018017) #19	GP1BB (ENSCLAG00000016703) #21	SEPTIN5 (ENSCLAG00000015333) #20	TBX1 (ENSCLAG00000014504) #22	ENSCLAG00000013592	TXNRD2 (ENSCLAG00000014718) #25	COMT (ENSCLAG00000013891) #26	ARVCF (ENSCLAG00000015864) #27	TANGO2 (ENSCLAG00000016523) #28	DGCR8 (ENSCLAG00000013910) #29	TRMT2A (ENSCLAG00000015094) #30	RANBP1 (ENSCLAG00000014666) #31	ZDHHC8 (ENSCLAG00000014913) #32	ENSCLAG00000014259 #33	RTN4R (ENSCLAG00000015372) #34	ENSCLAG00000016071 #7	ENSCLAG00000015292 #35	MROH9 (ENSCLAG00000017068)	HIC2 (ENSCLAG00000017018)
Lagomorpha	ANCESTRAL SPECIES	196																ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Pika	MODERN SPECIES	3984																ENSOPRG00000014909 #22
Rabbit	MODERN SPECIES	559																ENSOCUG00000014466 #22	GNB1L (ENSOCUG00000026037) #23	RTL10 (ENSOCUG00000010326) #24	ARVCF (ENSOCUG00000006299) #27	COMT (ENSOCUG00000006297) #26	TANGO2 (ENSOCUG00000021272) #28	DGCR8 (ENSOCUG00000003612) #29	ENSOCUG00000037773	TRMT2A (ENSOCUG00000021225) #30	RANBP1 (ENSOCUG00000022698) #31	ZDHHC8 (ENSOCUG00000001186) #32	CCDC188 (ENSOCUG00000033404) #33	ENSOCUG00000009391 #7	ENSOCUG00000024558 #35	ENSOCUG00000021383	ENSOCUG00000037703
Laurasiatheria	ANCESTRAL SPECIES	19	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154816.a.b #22
Common shrew	MODERN SPECIES	5946																ENSSARG00000008908 #22
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Suina	ANCESTRAL SPECIES	20	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Pig	MODERN SPECIES	5	DGCR2 (ENSSSCG00000036280) #8	TSSK1B (ENSSSCG00000058838)	TSSK2 (ENSSSCG00000010113) #10	ESS2 (ENSSSCG00000010114) #9	GSC2 (ENSSSCG00000062065) #11	SLC25A1 (ENSSSCG00000010116) #12	ENSSSCG00000010117	HIRA (ENSSSCG00000010118) #14	MRPL40 (ENSSSCG00000034014) #16	C22orf39 (ENSSSCG00000040740) #15	UFD1 (ENSSSCG00000010121) #17	CDC45 (ENSSSCG00000010122) #18	CLDN5 (ENSSSCG00000041667) #19	SEPTIN5 (ENSSSCG00000010128) #20	GP1BB (ENSSSCG00000030732) #21	TBX1 (ENSSSCG00000037762) #22	GNB1L (ENSSSCG00000010130) #23	TXNRD2 (ENSSSCG00000010131) #25	COMT (ENSSSCG00000010132) #26	ARVCF (ENSSSCG00000010133) #27	TANGO2 (ENSSSCG00000010134) #28	DGCR8 (ENSSSCG00000010135) #29	TRMT2A (ENSSSCG00000010136) #30	ENSSSCG00000059366	RANBP1 (ENSSSCG00000038308) #31	ZDHHC8 (ENSSSCG00000010138) #32	CCDC188 (ENSSSCG00000010139) #33	RTN4R (ENSSSCG00000034656) #34	ENSSSCG00000033787 #7	ENSSSCG00000032073 #35	CHRM3 (ENSSSCG00000026176)
Chacoan peccary	MODERN SPECIES	812	ZNF74 (ENSCWAG00000004923) #36	DGCR2 (ENSCWAG00000004856) #8	TSSK1B (ENSCWAG00000004836)	TSSK2 (ENSCWAG00000004822) #10	ESS2 (ENSCWAG00000004769) #9	GSC2 (ENSCWAG00000004751) #11	SLC25A1 (ENSCWAG00000004726) #12	HIRA (ENSCWAG00000004646) #14	MRPL40 (ENSCWAG00000004614) #16	C22orf39 (ENSCWAG00000004586) #15	UFD1 (ENSCWAG00000004536) #17	CDC45 (ENSCWAG00000004361) #18	CLDN5 (ENSCWAG00000004333) #19	SEPTIN5 (ENSCWAG00000004243) #20	GP1BB (ENSCWAG00000004211) #21	TBX1 (ENSCWAG00000004121) #22	GNB1L (ENSCWAG00000004091) #23	TXNRD2 (ENSCWAG00000003913) #25	COMT (ENSCWAG00000011158) #26	ARVCF (ENSCWAG00000010468) #27	TANGO2 (ENSCWAG00000010139) #28	DGCR8 (ENSCWAG00000010025) #29	ENSCWAG00000010009	TRMT2A (ENSCWAG00000009922) #30	RANBP1 (ENSCWAG00000009835) #31	ZDHHC8 (ENSCWAG00000009756) #32	CCDC188 (ENSCWAG00000009656) #33	RTN4R (ENSCWAG00000009631) #34
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Camelidae	ANCESTRAL SPECIES	72	ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Arabian camel	MODERN SPECIES	25	ENSCDRG00005009059 #36	ENSCDRG00005019616	DGCR2 (ENSCDRG00005019475) #8	TSSK1B (ENSCDRG00005019438)	TSSK2 (ENSCDRG00005019423) #10	ESS2 (ENSCDRG00005019401) #9	SLC25A1 (ENSCDRG00005019345) #12	HIRA (ENSCDRG00005019217) #14	MRPL40 (ENSCDRG00005019190) #16	C22orf39 (ENSCDRG00005019176) #15	UFD1 (ENSCDRG00005019126) #17	CDC45 (ENSCDRG00005019061) #18	CLDN5 (ENSCDRG00005019043) #19	SEPTIN5 (ENSCDRG00005018840) #20	GP1BB (ENSCDRG00005018787) #21	TBX1 (ENSCDRG00005018736) #22	GNB1L (ENSCDRG00005018677) #23	TXNRD2 (ENSCDRG00005018620) #25	COMT (ENSCDRG00005018572) #26	ARVCF (ENSCDRG00005018376) #27	TANGO2 (ENSCDRG00005018134) #28	DGCR8 (ENSCDRG00005017952) #29	ENSCDRG00005017923	TRMT2A (ENSCDRG00005017855) #30	RANBP1 (ENSCDRG00005017795) #31	ENSCDRG00005017778 #32	CCDC188 (ENSCDRG00005017731) #33	RTN4R (ENSCDRG00005017692) #34	ENSCDRG00005017649 #7	ENSCDRG00005017582 #35
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000162000.d #36	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b.f.a #7	ENSGT00390000017663 #35
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000162226 #10	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b.f.a #7	ENSGT00390000017663 #35
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00940000166811 #24	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b.f.a #7	ENSGT00390000017663 #35
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856.g #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b.f.a #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b
Narwhal	MODERN SPECIES	295	ZNF74 (ENSMMNG00015003194) #36	ENSMMNG00015003178	DGCR2 (ENSMMNG00015003147) #8	TSSK1B (ENSMMNG00015003130)	TSSK2 (ENSMMNG00015003121) #10	ESS2 (ENSMMNG00015003094) #9	GSC2 (ENSMMNG00015003081) #11	ENSMMNG00015003057 #12	HIRA (ENSMMNG00015003001) #14	MRPL40 (ENSMMNG00015002968) #16	C22orf39 (ENSMMNG00015002959) #15	UFD1 (ENSMMNG00015002931) #17	CDC45 (ENSMMNG00015002864) #18	SEPTIN5 (ENSMMNG00015002817) #20	GP1BB (ENSMMNG00015002796) #21	TBX1 (ENSMMNG00015002777) #22	GNB1L (ENSMMNG00015002745) #23	TXNRD2 (ENSMMNG00015002636) #25	COMT (ENSMMNG00015002538) #26	ARVCF (ENSMMNG00015002461) #27	TANGO2 (ENSMMNG00015002360) #28	DGCR8 (ENSMMNG00015002248) #29	ENSMMNG00015002215	TRMT2A (ENSMMNG00015002180) #30	RANBP1 (ENSMMNG00015002143) #31	ZDHHC8 (ENSMMNG00015002094) #32	CCDC188 (ENSMMNG00015002045) #33	RTN4R (ENSMMNG00015002020) #34	ENSMMNG00015001992 #7	ENSMMNG00015001943 #35	MC2R (ENSMMNG00015001914)
Beluga whale	MODERN SPECIES	60	ZNF74 (ENSDLEG00000012291) #36	DGCR2 (ENSDLEG00000012240) #8	TSSK1B (ENSDLEG00000012230)	TSSK2 (ENSDLEG00000012209) #10	ESS2 (ENSDLEG00000012187) #9	GSC2 (ENSDLEG00000012166) #11	ENSDLEG00000012143 #12	HIRA (ENSDLEG00000011918) #14	MRPL40 (ENSDLEG00000011862) #16	C22orf39 (ENSDLEG00000020170) #15	UFD1 (ENSDLEG00000020167) #17	CDC45 (ENSDLEG00000020154) #18	CLDN5 (ENSDLEG00000020150) #19	GP1BB (ENSDLEG00000020147) #21	SEPT5 (ENSDLEG00000020145) #20	TBX1 (ENSDLEG00000020144) #22	GNB1L (ENSDLEG00000020142) #23	TXNRD2 (ENSDLEG00000020139) #25	COMT (ENSDLEG00000020135) #26	ARVCF (ENSDLEG00000020102) #27	TANGO2 (ENSDLEG00000020094) #28	DGCR8 (ENSDLEG00000020080) #29	TRMT2A (ENSDLEG00000020075) #30	RANBP1 (ENSDLEG00000020049) #31	ZDHHC8 (ENSDLEG00000020024) #32	RTN4R (ENSDLEG00000020018) #34	ENSDLEG00000020007 #7	DGCR6L (ENSDLEG00000020002) #35	MC2R (ENSDLEG00000020000)	RNMT (ENSDLEG00000019988)	FAM210A (ENSDLEG00000019983)
Vaquita	MODERN SPECIES	5	ENSPSNG00000010041	DGCR2 (ENSPSNG00000009976) #8	TSSK1B (ENSPSNG00000009934)	TSSK2 (ENSPSNG00000009893) #10	ESS2 (ENSPSNG00000009812) #9	GSC2 (ENSPSNG00000009743) #11	SLC25A1 (ENSPSNG00000009671) #12	HIRA (ENSPSNG00000022312) #14	MRPL40 (ENSPSNG00000022307) #16	C22orf39 (ENSPSNG00000022302) #15	UFD1 (ENSPSNG00000022294) #17	CDC45 (ENSPSNG00000022278) #18	CLDN5 (ENSPSNG00000022262) #19	SEPTIN5 (ENSPSNG00000022251) #20	GP1BB (ENSPSNG00000022243) #21	TBX1 (ENSPSNG00000022232) #22	RTL10 (ENSPSNG00000022217) #24	GNB1L (ENSPSNG00000022213) #23	TXNRD2 (ENSPSNG00000022136) #25	COMT (ENSPSNG00000022080) #26	ARVCF (ENSPSNG00000022048) #27	TANGO2 (ENSPSNG00000021992) #28	DGCR8 (ENSPSNG00000021917) #29	TRMT2A (ENSPSNG00000021867) #30	RANBP1 (ENSPSNG00000021841) #31	ZDHHC8 (ENSPSNG00000021796) #32	RTN4R (ENSPSNG00000021732) #34	ENSPSNG00000021724 #7	ENSPSNG00000021716 #35	MC2R (ENSPSNG00000021708)	RNMT (ENSPSNG00000021693)
Sperm whale	MODERN SPECIES	10	ENSPCTG00005012312	SLC7A4 (ENSPCTG00005012254)	TUBA3C (ENSPCTG00005012020)	MZT2B (ENSPCTG00005011918)	SMPD4 (ENSPCTG00005011226)	ENSPCTG00005010751	MED15 (ENSPCTG00005010479)	KLHL22 (ENSPCTG00005010407)	SCARF2 (ENSPCTG00005010140) #37	ZNF74 (ENSPCTG00005010108) #36	ENSPCTG00005010005	DGCR2 (ENSPCTG00005009960) #8	HIRA (ENSPCTG00005009870) #14	CLDN5 (ENSPCTG00005009841) #19	ENSPCTG00005009699 #25	TBX1 (ENSPCTG00005009547) #22	GNB1L (ENSPCTG00005009492) #23	ENSPCTG00005009452	TRMT2A (ENSPCTG00005009317) #30	ENSPCTG00005009225 #31	ZDHHC8 (ENSPCTG00005009100) #32	ENSPCTG00005009045 #35	ENSPCTG00005013482 #7	RTN4R (ENSPCTG00005013415) #34	MC2R (ENSPCTG00005013398)	RNMT (ENSPCTG00005013342)	FAM210A (ENSPCTG00005013294)	LDLRAD4 (ENSPCTG00005013235)	CEP192 (ENSPCTG00005012272)	SEH1L (ENSPCTG00005011993)	PTPN2 (ENSPCTG00005011793)
Blue whale	MODERN SPECIES	5	ZNF74 (ENSBMSG00010016713) #36	DGCR2 (ENSBMSG00010016761) #8	TSSK1B (ENSBMSG00010016809)	TSSK2 (ENSBMSG00010016818) #10	ESS2 (ENSBMSG00010016855) #9	GSC2 (ENSBMSG00010016908) #11	SLC25A1 (ENSBMSG00010016932) #12	ENSBMSG00010017015 #14	MRPL40 (ENSBMSG00010017278) #16	ENSBMSG00010017317 #15	UFD1 (ENSBMSG00010017349) #17	CDC45 (ENSBMSG00010017411) #18	CLDN5 (ENSBMSG00010017459) #19	SEPTIN5 (ENSBMSG00010017511) #20	GP1BB (ENSBMSG00010017581) #21	TBX1 (ENSBMSG00010017617) #22	GNB1L (ENSBMSG00010017693) #23	TXNRD2 (ENSBMSG00010017798) #25	COMT (ENSBMSG00010018058) #26	ARVCF (ENSBMSG00010018117) #27	TANGO2 (ENSBMSG00010018220) #28	DGCR8 (ENSBMSG00010018356) #29	TRMT2A (ENSBMSG00010018395) #30	RANBP1 (ENSBMSG00010018448) #31	ZDHHC8 (ENSBMSG00010018514) #32	CCDC188 (ENSBMSG00010018579) #33	ENSBMSG00010018682	RTN4R (ENSBMSG00010018698) #34	ENSBMSG00010018745 #7	ENSBMSG00010018836 #35	MC2R (ENSBMSG00010018850)
Pecora	ANCESTRAL SPECIES	14	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Percora_a	ANCESTRAL SPECIES	17	ENSGT01080000257897	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Siberian musk deer	MODERN SPECIES	1175	ENSMMSG00000008882	DGCR2 (ENSMMSG00000008848) #8	TSSK1B (ENSMMSG00000008833)	TSSK2 (ENSMMSG00000008823) #10	ESS2 (ENSMMSG00000008789) #9	GSC2 (ENSMMSG00000008763) #11	SLC25A1 (ENSMMSG00000008735) #12	HIRA (ENSMMSG00000008682) #14	MRPL40 (ENSMMSG00000008630) #16	C22orf39 (ENSMMSG00000008603) #15	UFD1 (ENSMMSG00000008492) #17	CDC45 (ENSMMSG00000008266) #18	CLDN5 (ENSMMSG00000008238) #19	GP1BB (ENSMMSG00000008211) #21	SEPTIN5 (ENSMMSG00000008112) #20	TBX1 (ENSMMSG00000008043) #22	GNB1L (ENSMMSG00000007985) #23	TXNRD2 (ENSMMSG00000007930) #25	COMT (ENSMMSG00000007908) #26	ARVCF (ENSMMSG00000007015) #27	TANGO2 (ENSMMSG00000006788) #28	DGCR8 (ENSMMSG00000006700) #29	ENSMMSG00000006680	TRMT2A (ENSMMSG00000006612) #30	RANBP1 (ENSMMSG00000006559) #31	ZDHHC8 (ENSMMSG00000006430) #32	CCDC188 (ENSMMSG00000006374) #33	RTN4R (ENSMMSG00000006355) #34	ENSMMSG00000006242 #7	ENSMMSG00000006229 #35	ENSMMSG00000006217
Bovidae	ANCESTRAL SPECIES	17	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Bovinae	ANCESTRAL SPECIES	13	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Bos	ANCESTRAL SPECIES	14	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Bos_b	ANCESTRAL SPECIES	13	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Hybrid Bos Indicus	MODERN SPECIES	8	ZNF74 (ENSBIXG00005017026) #36	DGCR2 (ENSBIXG00005017055) #8	TSSK1B (ENSBIXG00005002774)	TSSK2 (ENSBIXG00005017076) #10	ESS2 (ENSBIXG00005017113) #9	GSC2 (ENSBIXG00005017143) #11	SLC25A1 (ENSBIXG00005017171) #12	HIRA (ENSBIXG00005017294) #14	MRPL40 (ENSBIXG00005017318) #16	ENSBIXG00005017342 #15	UFD1 (ENSBIXG00005017395) #17	CDC45 (ENSBIXG00005017557) #18	CLDN5 (ENSBIXG00005002859) #19	SEPTIN5 (ENSBIXG00005017620) #20	GP1BB (ENSBIXG00005017653) #21	TBX1 (ENSBIXG00005017714) #22	GNB1L (ENSBIXG00005017779) #23	ENSBIXG00005017845 #25	ENSBIXG00005017867 #26	ARVCF (ENSBIXG00005002918) #27	TANGO2 (ENSBIXG00005018016) #28	DGCR8 (ENSBIXG00005002928) #29	ENSBIXG00005018056	TRMT2A (ENSBIXG00005018069) #30	RANBP1 (ENSBIXG00005018083) #31	ZDHHC8 (ENSBIXG00005005852) #32	CCDC188 (ENSBIXG00005018144) #33	RTN4R (ENSBIXG00005018165) #34	ENSBIXG00005018339 #7	ENSBIXG00005018370 #35
Cow	MODERN SPECIES	8	ZNF74 (ENSBTAG00000016257) #36	DGCR2 (ENSBTAG00000000429) #8	TSSK1B (ENSBTAG00000045955)	TSSK2 (ENSBTAG00000048123) #10	ESS2 (ENSBTAG00000018534) #9	GSC2 (ENSBTAG00000047526) #11	SLC25A1 (ENSBTAG00000008528) #12	HIRA (ENSBTAG00000019888) #14	MRPL40 (ENSBTAG00000019891) #16	ENSBTAG00000048885 #15	UFD1 (ENSBTAG00000004284) #17	CDC45 (ENSBTAG00000004286) #18	CLDN5 (ENSBTAG00000022020) #19	SEPTIN5 (ENSBTAG00000008320) #20	GP1BB (ENSBTAG00000039059) #21	TBX1 (ENSBTAG00000048862) #22	GNB1L (ENSBTAG00000021052) #23	TXNRD2 (ENSBTAG00000043581) #25	COMT (ENSBTAG00000019516) #26	ARVCF (ENSBTAG00000001473) #27	TANGO2 (ENSBTAG00000012421) #28	DGCR8 (ENSBTAG00000019869) #29	TRMT2A (ENSBTAG00000019871) #30	ENSBTAG00000049062	RANBP1 (ENSBTAG00000006656) #31	ZDHHC8 (ENSBTAG00000006657) #32	CCDC188 (ENSBTAG00000047626) #33	RTN4R (ENSBTAG00000046677) #34	PRODH (ENSBTAG00000047676) #7	DGCR6L (ENSBTAG00000047299) #35	ENSBTAG00000050485
Bos_a	ANCESTRAL SPECIES	56	ENSGT00940000162000.d #36	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Domestic yak	MODERN SPECIES	7	SCARF2 (ENSBGRG00000018607) #37	ZNF74 (ENSBGRG00000018898) #36	DGCR2 (ENSBGRG00000018919) #8	TSSK1B (ENSBGRG00000019032)	ENSBGRG00000019056 #9	GSC2 (ENSBGRG00000019298) #11	SLC25A1 (ENSBGRG00000019365) #12	HIRA (ENSBGRG00000019430) #14	MRPL40 (ENSBGRG00000019620) #16	ENSBGRG00000019661 #15	UFD1 (ENSBGRG00000019757) #17	CDC45 (ENSBGRG00000020248) #18	CLDN5 (ENSBGRG00000020524) #19	SEPTIN5 (ENSBGRG00000020562) #20	GP1BB (ENSBGRG00000020762) #21	TBX1 (ENSBGRG00000020801) #22	GNB1L (ENSBGRG00000020901) #23	TXNRD2 (ENSBGRG00000021002) #25	COMT (ENSBGRG00000021775) #26	ARVCF (ENSBGRG00000021889) #27	ENSBGRG00000022547 #28	DGCR8 (ENSBGRG00000022686) #29	TRMT2A (ENSBGRG00000022963) #30	ZDHHC8 (ENSBGRG00000023060) #32	CCDC188 (ENSBGRG00000023173) #33	RTN4R (ENSBGRG00000023275) #34	ENSBGRG00000023329 #7	ENSBGRG00000023569 #35
American bison	MODERN SPECIES	1658																ENSBBBG00000000854 #22
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	21	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Chiroptera	ANCESTRAL SPECIES	74	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Megabat	MODERN SPECIES	2772														SEPTIN5 (ENSPVAG00000012974) #20	GP1BB (ENSPVAG00000012978) #21	TBX1 (ENSPVAG00000012980) #22	GNB1L (ENSPVAG00000012982) #23	TXNRD2 (ENSPVAG00000012986) #25
Microchiroptera	ANCESTRAL SPECIES	9	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01010000222320.a.a.a.a.a	ENSGT01010000222320.a.b.b
Greater horseshoe bat	MODERN SPECIES	17	DGCR2 (ENSRFEG00010020348) #8	TSSK1B (ENSRFEG00010020420)	TSSK2 (ENSRFEG00010020429) #10	ESS2 (ENSRFEG00010020441) #9	GSC2 (ENSRFEG00010020469) #11	SLC25A1 (ENSRFEG00010020494) #12	CLTCL1 (ENSRFEG00010020555) #13	HIRA (ENSRFEG00010020801) #14	MRPL40 (ENSRFEG00010021001) #16	C22orf39 (ENSRFEG00010021008) #15	UFD1 (ENSRFEG00010021022) #17	CDC45 (ENSRFEG00010021045) #18	CLDN5 (ENSRFEG00010021064) #19	SEPTIN5 (ENSRFEG00010021082) #20	GP1BB (ENSRFEG00010021138) #21	TBX1 (ENSRFEG00010021166) #22	GNB1L (ENSRFEG00010021187) #23	TXNRD2 (ENSRFEG00010021251) #25	COMT (ENSRFEG00010021372) #26	ARVCF (ENSRFEG00010021395) #27	TANGO2 (ENSRFEG00010021444) #28	DGCR8 (ENSRFEG00010021501) #29	TRMT2A (ENSRFEG00010021528) #30	RANBP1 (ENSRFEG00010021579) #31	ZDHHC8 (ENSRFEG00010021616) #32	CCDC188 (ENSRFEG00010006176) #33	RTN4R (ENSRFEG00010006249) #34	ENSRFEG00010006364 #7	ENSRFEG00010006433 #35	ENSRFEG00010006494	ENSRFEG00010006511
Equus	ANCESTRAL SPECIES	67	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b.k #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Donkey	MODERN SPECIES	28	ENSEASG00005006148	ENSEASG00005006142 #8	ENSEASG00005030907	TSSK2 (ENSEASG00005006134) #10	ESS2 (ENSEASG00005006119) #9	GSC2 (ENSEASG00005006115) #11	SLC25A1 (ENSEASG00005006114) #12	HIRA (ENSEASG00005010492) #14	ENSEASG00005027851 #16	C22orf39 (ENSEASG00005010494) #15	UFD1 (ENSEASG00005010495) #17	CDC45 (ENSEASG00005010496) #18	CLDN5 (ENSEASG00005031236) #19	SEPTIN5 (ENSEASG00005010502) #20	GP1BB (ENSEASG00005010503) #21	TBX1 (ENSEASG00005010505) #22	GNB1L (ENSEASG00005010507) #23	TXNRD2 (ENSEASG00005010510) #25	ENSEASG00005035506 #26	ENSEASG00005010514 #26	ARVCF (ENSEASG00005010516) #27	TANGO2 (ENSEASG00005010518) #28	DGCR8 (ENSEASG00005010521) #29	TRMT2A (ENSEASG00005010524) #30	RANBP1 (ENSEASG00005010526) #31	ZDHHC8 (ENSEASG00005010529) #32	CCDC188 (ENSEASG00005028385) #33	RTN4R (ENSEASG00005010530) #34	ENSEASG00005010531 #7	ENSEASG00005037006	ENSEASG00005025688 #35
Horse	MODERN SPECIES	29	CA15 (ENSECAG00000039414)	DGCR2 (ENSECAG00000014063) #8	ESS2 (ENSECAG00000014664) #9	GSC2 (ENSECAG00000029926) #11	ENSECAG00000021409 #12	CLTCL1 (ENSECAG00000033498) #13	ENSECAG00000051965	ENSECAG00000056680	ENSECAG00000045279	MRPL40 (ENSECAG00000009876) #16	HIRA (ENSECAG00000000286) #14	UFD1 (ENSECAG00000011062) #17	CDC45 (ENSECAG00000011788) #18	CLDN5 (ENSECAG00000047513) #19	SEPTIN5 (ENSECAG00000020718) #20	TBX1 (ENSECAG00000035745) #22	GNB1L (ENSECAG00000026940) #23	TXNRD2 (ENSECAG00000026879) #25	ENSECAG00000005359 #26	ARVCF (ENSECAG00000026951) #27	TANGO2 (ENSECAG00000008697) #28	ENSECAG00000045428	DGCR8 (ENSECAG00000009295) #29	TRMT2A (ENSECAG00000012384) #30	RANBP1 (ENSECAG00000017197) #31	ZDHHC8 (ENSECAG00000000562) #32	CCDC188 (ENSECAG00000030675) #33	RTN4R (ENSECAG00000004778) #34	ENSECAG00000038666 #35	ENSECAG00000026825 #7
Carnivora	ANCESTRAL SPECIES	13	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b
Felidae	ANCESTRAL SPECIES	20	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00950000183200.A.a.b.b.d.a	ENSGT00940000156871
Cat	MODERN SPECIES	243	CA15 (ENSFCAG00000048855)	DGCR2 (ENSFCAG00000009527) #8	TSSK1B (ENSFCAG00000023621)	TSSK2 (ENSFCAG00000009531) #10	ESS2 (ENSFCAG00000029613) #9	GSC2 (ENSFCAG00000042776) #11	SLC25A1 (ENSFCAG00000009533) #12	CLTCL1 (ENSFCAG00000002747) #13	MRPL40 (ENSFCAG00000002752) #16	HIRA (ENSFCAG00000002750) #14	UFD1 (ENSFCAG00000004294) #17	CDC45 (ENSFCAG00000004297) #18	CLDN5 (ENSFCAG00000029093) #19	SEPTIN5 (ENSFCAG00000035936) #20	GP1BB (ENSFCAG00000032253) #21	TBX1 (ENSFCAG00000005446) #22	GNB1L (ENSFCAG00000018235) #23	TXNRD2 (ENSFCAG00000002682) #25	COMT (ENSFCAG00000002684) #26	ARVCF (ENSFCAG00000002686) #27	TANGO2 (ENSFCAG00000002688) #28	DGCR8 (ENSFCAG00000006801) #29	TRMT2A (ENSFCAG00000004170) #30	RANBP1 (ENSFCAG00000004171) #31	ZDHHC8 (ENSFCAG00000004172) #32	CCDC188 (ENSFCAG00000029025) #33	RTN4R (ENSFCAG00000032911) #34	ENSFCAG00000023783 #35	ENSFCAG00000028790 #7	ENSFCAG00000052978	ENSFCAG00000006400
Panthera	ANCESTRAL SPECIES	35	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00950000183200.A.a.b.b.d.a	ENSGT00940000153474.a.b.a.b.b
Panthera_a	ANCESTRAL SPECIES	62	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00950000183200.A.a.b.b.d.a
lion	MODERN SPECIES	12	TSSK1B (ENSPLOG00000016648)	TSSK2 (ENSPLOG00000016661) #10	ESS2 (ENSPLOG00000016681) #9	GSC2 (ENSPLOG00000016795) #11	ENSPLOG00000016834	SLC25A1 (ENSPLOG00000016874) #12	CLTCL1 (ENSPLOG00000016947) #13	HIRA (ENSPLOG00000017572) #14	MRPL40 (ENSPLOG00000018056) #16	C22orf39 (ENSPLOG00000018074) #15	UFD1 (ENSPLOG00000018116) #17	CDC45 (ENSPLOG00000018278) #18	CLDN5 (ENSPLOG00000018318) #19	SEPTIN5 (ENSPLOG00000018341) #20	GP1BB (ENSPLOG00000018495) #21	TBX1 (ENSPLOG00000018535) #22	GNB1L (ENSPLOG00000018672) #23	TXNRD2 (ENSPLOG00000018769) #25	COMT (ENSPLOG00000019271) #26	ARVCF (ENSPLOG00000019377) #27	TANGO2 (ENSPLOG00000019874) #28	DGCR8 (ENSPLOG00000019913) #29	TRMT2A (ENSPLOG00000019989) #30	RANBP1 (ENSPLOG00000020134) #31	ZDHHC8 (ENSPLOG00000020202) #32	CCDC188 (ENSPLOG00000020243) #33	RTN4R (ENSPLOG00000020294) #34	ENSPLOG00000020330 #7	ENSPLOG00000020418 #35	ENSPLOG00000020443	IGLV5-52 (ENSPLOG00000020540)
leopard	MODERN SPECIES	178	ZNF74 (ENSPPRG00000008009) #36	ENSPPRG00000007469	DGCR2 (ENSPPRG00000007393) #8	ESS2 (ENSPPRG00000006405) #9	GSC2 (ENSPPRG00000006381) #11	SLC25A1 (ENSPPRG00000006372) #12	CLTCL1 (ENSPPRG00000006295) #13	HIRA (ENSPPRG00000005445) #14	MRPL40 (ENSPPRG00000004672) #16	C22orf39 (ENSPPRG00000004565) #15	UFD1 (ENSPPRG00000004497) #17	CDC45 (ENSPPRG00000004159) #18	CLDN5 (ENSPPRG00000022046) #19	SEPTIN5 (ENSPPRG00000002930) #20	GP1BB (ENSPPRG00000002736) #21	TBX1 (ENSPPRG00000002705) #22	GNB1L (ENSPPRG00000002627) #23	TXNRD2 (ENSPPRG00000000978) #25	COMT (ENSPPRG00000023206) #26	ARVCF (ENSPPRG00000023371) #27	TANGO2 (ENSPPRG00000022392) #28	DGCR8 (ENSPPRG00000018958) #29	TRMT2A (ENSPPRG00000016789) #30	RANBP1 (ENSPPRG00000015479) #31	ZDHHC8 (ENSPPRG00000014676) #32	CCDC188 (ENSPPRG00000013446) #33	RTN4R (ENSPPRG00000013418) #34	ENSPPRG00000013092 #7	ENSPPRG00000011401 #35	PIWIL3 (ENSPPRG00000011117)
Tiger	MODERN SPECIES	355																ENSPTIG00000015403 #22	GNB1L (ENSPTIG00000015570) #23	TXNRD2 (ENSPTIG00000017883) #25	COMT (ENSPTIG00000021113) #26	ARVCF (ENSPTIG00000021324) #27	TANGO2 (ENSPTIG00000007111) #28	DGCR8 (ENSPTIG00000010980) #29	TRMT2A (ENSPTIG00000014523) #30	RANBP1 (ENSPTIG00000016192) #31	CCDC188 (ENSPTIG00000019384) #33	RTN4R (ENSPTIG00000019691) #34	ENSPTIG00000019761 #7	ENSPTIG00000008722 #35	PIWIL3 (ENSPTIG00000009971)
Caniformia	ANCESTRAL SPECIES	9	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b
Canidae	ANCESTRAL SPECIES	55	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
Red fox	MODERN SPECIES	174	ENSVVUG00000023757	DGCR2 (ENSVVUG00000023768) #8	TSSK1B (ENSVVUG00000023781)	TSSK2 (ENSVVUG00000023783) #10	ESS2 (ENSVVUG00000023785) #9	SLC25A1 (ENSVVUG00000023788) #12	CLTCL1 (ENSVVUG00000023881) #13	HIRA (ENSVVUG00000025357) #14	MRPL40 (ENSVVUG00000025360) #16	CUNH22orf39 (ENSVVUG00000025361) #15	UFD1 (ENSVVUG00000025364) #17	CDC45 (ENSVVUG00000025367) #18	CLDN5 (ENSVVUG00000025372) #19	SEPTIN5 (ENSVVUG00000025380) #20	ENSVVUG00000025383 #21	ENSVVUG00000025387 #22	GNB1L (ENSVVUG00000025391) #23	TXNRD2 (ENSVVUG00000025396) #25	COMT (ENSVVUG00000025402) #26	ARVCF (ENSVVUG00000025405) #27	TANGO2 (ENSVVUG00000025407) #28	DGCR8 (ENSVVUG00000025413) #29	TRMT2A (ENSVVUG00000025420) #30	RANBP1 (ENSVVUG00000025421) #31	ZDHHC8 (ENSVVUG00000025423) #32	CCDC188 (ENSVVUG00000025424) #33	RTN4R (ENSVVUG00000025427) #34	ENSVVUG00000025430 #7	ENSVVUG00000025464 #35	ENSVVUG00000025466
Canis_lupus	ANCESTRAL SPECIES	43	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000166811 #24	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234531.A.a.eb
Dingo	MODERN SPECIES	108	DGCR2 (ENSCAFG00020010588) #8	TSSK1B (ENSCAFG00020010585)	TSSK2 (ENSCAFG00020010581) #10	ESS2 (ENSCAFG00020010579) #9	GSC2 (ENSCAFG00020010577) #11	SLC25A1 (ENSCAFG00020010571) #12	CLTCL1 (ENSCAFG00020008131) #13	HIRA (ENSCAFG00020007998) #14	MRPL40 (ENSCAFG00020007995) #16	C22orf39 (ENSCAFG00020007992) #15	UFD1 (ENSCAFG00020007988) #17	CDC45 (ENSCAFG00020007915) #18	CLDN5 (ENSCAFG00020007906) #19	SEPTIN5 (ENSCAFG00020007897) #20	GP1BB (ENSCAFG00020007895) #21	TBX1 (ENSCAFG00020007879) #22	GNB1L (ENSCAFG00020007876) #23	TXNRD2 (ENSCAFG00020007857) #25	COMT (ENSCAFG00020007849) #26	ARVCF (ENSCAFG00020007804) #27	TANGO2 (ENSCAFG00020007792) #28	DGCR8 (ENSCAFG00020007769) #29	TRMT2A (ENSCAFG00020007738) #30	RANBP1 (ENSCAFG00020007723) #31	ZDHHC8 (ENSCAFG00020007710) #32	ENSCAFG00020007701 #33	RTN4R (ENSCAFG00020007696) #34	ENSCAFG00020007638 #7	ENSCAFG00020007629 #35	ENSCAFG00020007599	VPREB1 (ENSCAFG00020007589)
Dog	MODERN SPECIES	18	ENSCAFG00845030201	TSSK1B (ENSCAFG00845030188)	ENSCAFG00845030168 #8	TSSK2 (ENSCAFG00845030135) #10	ESS2 (ENSCAFG00845030127) #9	GSC2 (ENSCAFG00845030114) #11	SLC25A1 (ENSCAFG00845030106) #12	CLTCL1 (ENSCAFG00845030003) #13	HIRA (ENSCAFG00845029669) #14	ENSCAFG00845029562 #16	C26H22orf39 (ENSCAFG00845029541) #15	UFD1 (ENSCAFG00845029515) #17	CDC45 (ENSCAFG00845029448) #18	CLDN5 (ENSCAFG00845029410) #19	SEPTIN5 (ENSCAFG00845029335) #20	ENSCAFG00845029160 #22	GNB1L (ENSCAFG00845029046) #23	ENSCAFG00845028996 #24	TXNRD2 (ENSCAFG00845028764) #25	COMT (ENSCAFG00845028665) #26	ARVCF (ENSCAFG00845028288) #27	TANGO2 (ENSCAFG00845028132) #28	DGCR8 (ENSCAFG00845027785) #29	TRMT2A (ENSCAFG00845027597) #30	ENSCAFG00845027449	ZDHHC8 (ENSCAFG00845027068) #32	CCDC188 (ENSCAFG00845026820) #33	RTN4R (ENSCAFG00845026751) #34	ENSCAFG00845026581 #7	ENSCAFG00845026452 #35	ENSCAFG00845026346
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
American mink	MODERN SPECIES	186	DGCR2 (ENSNVIG00000022368) #8	ENSNVIG00000022387	ENSNVIG00000022390 #10	ESS2 (ENSNVIG00000022393) #9	GSC2 (ENSNVIG00000022406) #11	SLC25A1 (ENSNVIG00000022410) #12	CLTCL1 (ENSNVIG00000022420) #13	HIRA (ENSNVIG00000022490) #14	MRPL40 (ENSNVIG00000022531) #16	C22orf39 (ENSNVIG00000022538) #15	UFD1 (ENSNVIG00000022540) #17	CDC45 (ENSNVIG00000022560) #18	CLDN5 (ENSNVIG00000022587) #19	SEPTIN5 (ENSNVIG00000022591) #20	GP1BB (ENSNVIG00000022601) #21	TBX1 (ENSNVIG00000022605) #22	GNB1L (ENSNVIG00000022615) #23	TXNRD2 (ENSNVIG00000022635) #25	COMT (ENSNVIG00000022688) #26	ARVCF (ENSNVIG00000022696) #27	TANGO2 (ENSNVIG00000022715) #28	DGCR8 (ENSNVIG00000022717) #29	TRMT2A (ENSNVIG00000022735) #30	RANG (ENSNVIG00000022738) #31	ZDHHC8 (ENSNVIG00000022747) #32	CCDC188 (ENSNVIG00000022757) #33	RTN4R (ENSNVIG00000022759) #34	ENSNVIG00000022764 #7	DGCR6 (ENSNVIG00000022780) #35
Ferret	MODERN SPECIES	170	ENSMPUG00000003743 #36	ENSMPUG00000003747	DGCR2 (ENSMPUG00000003800) #8	TSSK1B (ENSMPUG00000019875)	TSSK2 (ENSMPUG00000019876) #10	ESS2 (ENSMPUG00000003809) #9	SLC25A1 (ENSMPUG00000003820) #12	CLTCL1 (ENSMPUG00000003829) #13	HIRA (ENSMPUG00000003849) #14	MRPL40 (ENSMPUG00000003865) #16	UFD1 (ENSMPUG00000003872) #17	CDC45 (ENSMPUG00000003884) #18	CLDN5 (ENSMPUG00000019877) #19	SEPTIN5 (ENSMPUG00000003893) #20	GP1BB (ENSMPUG00000019878) #21	ENSMPUG00000003900 #22	GNB1L (ENSMPUG00000003907) #23	TXNRD2 (ENSMPUG00000003930) #25	COMT (ENSMPUG00000003944) #26	ARVCF (ENSMPUG00000003983) #27	TANGO2 (ENSMPUG00000003998) #28	DGCR8 (ENSMPUG00000004005) #29	TRMT2A (ENSMPUG00000004015) #30	ENSMPUG00000004127 #31	ZDHHC8 (ENSMPUG00000004176) #32	ENSMPUG00000004263 #33	RTN4R (ENSMPUG00000004270) #34	ENSMPUG00000004273 #7	ENSMPUG00000004280 #35	MC2R (ENSMPUG00000019879)	MC5R (ENSMPUG00000019880)
Ursidae	ANCESTRAL SPECIES	23	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00410000026913	ENSGT00390000009387 #9	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Ursus	ANCESTRAL SPECIES	144	ENSGT00950000182890.D.c.b.a.a.b.a.a	ENSGT00940000162972	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35
American black bear	MODERN SPECIES	270														SEPTIN5 (ENSUAMG00000011220) #20	GP1BB (ENSUAMG00000011218) #21	TBX1 (ENSUAMG00000011214) #22	GNB1L (ENSUAMG00000011210) #23	ENSUAMG00000010940 #25	ENSUAMG00000010906 #25	COMT (ENSUAMG00000010900) #26	ARVCF (ENSUAMG00000010874) #27	TANGO2 (ENSUAMG00000010859) #28	DGCR8 (ENSUAMG00000010847) #29	TRMT2A (ENSUAMG00000010839) #30	RANBP1 (ENSUAMG00000010799) #31	ZDHHC8 (ENSUAMG00000010791) #32	CCDC188 (ENSUAMG00000010789) #33	RTN4R (ENSUAMG00000010787) #34	ENSUAMG00000010784 #7	ENSUAMG00000010782 #35
Giant Panda	MODERN SPECIES	5	ENSAMEG00000011203	ENSAMEG00000011211 #8	ENSAMEG00000028481	TSSK2 (ENSAMEG00000019541) #10	ENSAMEG00000011246	ESS2 (ENSAMEG00000011256) #9	SLC25A1 (ENSAMEG00000011279) #12	CLTCL1 (ENSAMEG00000011289) #13	MRPL40 (ENSAMEG00000011421) #16	HIRA (ENSAMEG00000011366) #14	UFD1 (ENSAMEG00000011428) #17	CDC45 (ENSAMEG00000011443) #18	CLDN5 (ENSAMEG00000019567) #19	SEPTIN5 (ENSAMEG00000011509) #20	GP1BB (ENSAMEG00000025487) #21	ENSAMEG00000011544 #22	ENSAMEG00000011548 #23	COMT (ENSAMEG00000011617) #26	ARVCF (ENSAMEG00000011628) #27	ENSAMEG00000011701 #28	DGCR8 (ENSAMEG00000011732) #29	TRMT2A (ENSAMEG00000011760) #30	RANBP1 (ENSAMEG00000011790) #31	ZDHHC8 (ENSAMEG00000011800) #32	CCDC188 (ENSAMEG00000025773) #33	ENSAMEG00000011833 #34	ENSAMEG00000000120	ENSAMEG00000018799	ENSAMEG00000029047	ENSAMEG00000002380	ENSAMEG00000031152
Atlantogenata	ANCESTRAL SPECIES	77	ENSGT00390000017655 #8	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000161017	ENSGT01030000234531.A.a
Afrotheria	ANCESTRAL SPECIES	107									ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000161017	ENSGT01030000234531.A.a	ENSGT00940000156516
Afrotheria_a	ANCESTRAL SPECIES	109									ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000159913 #20	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT00390000017663 #35	ENSGT00940000161017	ENSGT01030000234531.A.a	ENSGT00940000156516
Elephant	MODERN SPECIES	517	ENSLAFG00000027204	MYO18B (ENSLAFG00000017436)	GRK3 (ENSLAFG00000014476)	CRYBB2 (ENSLAFG00000006843)	CRYBB3 (ENSLAFG00000006837)	ENSLAFG00000006832	LHFPL7 (ENSLAFG00000021920)	SGSM1 (ENSLAFG00000015725)	HIRA (ENSLAFG00000011054) #14	MRPL40 (ENSLAFG00000011061) #16	C22orf39 (ENSLAFG00000011063) #15	UFD1 (ENSLAFG00000011066) #17	CDC45 (ENSLAFG00000011072) #18	CLDN5 (ENSLAFG00000011077) #19	SEPTIN5 (ENSLAFG00000028004) #20	TBX1 (ENSLAFG00000021555) #22	GNB1L (ENSLAFG00000020732) #23	TXNRD2 (ENSLAFG00000002408) #25	COMT (ENSLAFG00000028535) #26	ARVCF (ENSLAFG00000013570) #27	TANGO2 (ENSLAFG00000000319) #28	DGCR8 (ENSLAFG00000013724) #29	TRMT2A (ENSLAFG00000022939) #30	RANBP1 (ENSLAFG00000005862) #31	ZDHHC8 (ENSLAFG00000001671) #32	RTN4R (ENSLAFG00000027673) #34	ENSLAFG00000006399 #7	ENSLAFG00000006396 #35	ENSLAFG00000030923
Hyrax	MODERN SPECIES	11140																TBX1 (ENSPCAG00000010176) #22
Xenarthra	ANCESTRAL SPECIES	980																ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27
Armadillo	MODERN SPECIES	4318																TBX1 (ENSDNOG00000035422) #22	GNB1L (ENSDNOG00000024523) #23	TXNRD2 (ENSDNOG00000039033) #25	COMT (ENSDNOG00000007084) #26	ARVCF (ENSDNOG00000007092) #27
Marsupialia	ANCESTRAL SPECIES	16	ENSGT00410000026913	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7
Opossum	MODERN SPECIES	364																TBX1 (ENSMODG00000039978) #22	GNB1L (ENSMODG00000039502) #23
Marsupialia_b	ANCESTRAL SPECIES	17	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733.g #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT01100000263932	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00940000153380.D #33	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT01020000230351.F
Diprotodontia	ANCESTRAL SPECIES	22	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000162536 #11	ENSGT00940000169366	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733.g #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT01020000230351.F	ENSGT00940000154297.B
Diprotodontia_a	ANCESTRAL SPECIES	22	ENSGT00940000163130	ENSGT00940000162226 #10	ENSGT00390000009387 #9	ENSGT00940000169366	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733.g #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.b.b	ENSGT00950000182890.D.c.b.a.a.b.b.a.c.a.a.b.b	ENSGT00940000160711 #34	ENSGT00390000006265.b #7	ENSGT01020000230351.F
Common wonbat	MODERN SPECIES	910	DGCR2 (ENSVURG00010015555) #8	TSSK1B (ENSVURG00010015545)	TSSK2 (ENSVURG00010015542) #10	ESS2 (ENSVURG00010015537) #9	ENSVURG00010015531	SLC25A1 (ENSVURG00010015522) #12	CLTCL1 (ENSVURG00010015450) #13	HIRA (ENSVURG00010015408) #14	ENSVURG00010015399	MRPL40 (ENSVURG00010015389) #16	ENSVURG00010015383	UFD1 (ENSVURG00010015367) #17	CDC45 (ENSVURG00010015347) #18	ENSVURG00010015332	SEPTIN5 (ENSVURG00010015310) #20	TBX1 (ENSVURG00010015193) #22	GNB1L (ENSVURG00010015163) #23	TXNRD2 (ENSVURG00010015133) #25	ENSVURG00010015112	COMT (ENSVURG00010015104) #26	ARVCF (ENSVURG00010014746) #27	TANGO2 (ENSVURG00010014670) #28	ENSVURG00010014659	DGCR8 (ENSVURG00010014514) #29	ENSVURG00010014490	TRMT2A (ENSVURG00010014478) #30	RANBP1 (ENSVURG00010014464) #31	ZDHHC8 (ENSVURG00010014441) #32	ENSVURG00010014425
koala	MODERN SPECIES	64	TSSK2 (ENSPCIG00000001978) #10	ENSPCIG00000001953 #9	ENSPCIG00000001906	ENSPCIG00000001881	SLC25A1 (ENSPCIG00000025458) #12	CLTCL1 (ENSPCIG00000025462) #13	HIRA (ENSPCIG00000025474) #14	MRPL40 (ENSPCIG00000025479) #16	C22orf39 (ENSPCIG00000025482) #15	UFD1 (ENSPCIG00000025484) #17	CDC45 (ENSPCIG00000031353) #18	ENSPCIG00000033257 #19	ENSPCIG00000025491	SEPTIN5 (ENSPCIG00000035677) #20	GP1BB (ENSPCIG00000036048) #21	TBX1 (ENSPCIG00000025495) #22	GNB1L (ENSPCIG00000025496) #23	TXNRD2 (ENSPCIG00000025501) #25	ENSPCIG00000002881 #26	ARVCF (ENSPCIG00000002119) #27	TANGO2 (ENSPCIG00000013730) #28	ENSPCIG00000013727	DGCR8 (ENSPCIG00000027728) #29	TRMT2A (ENSPCIG00000027719) #30	ENSPCIG00000027726	RANBP1 (ENSPCIG00000027715) #31	ZDHHC8 (ENSPCIG00000027712) #32	ENSPCIG00000027710	ENSPCIG00000036969	ENSPCIG00000033718	ENSPCIG00000005425
Wallaby	MODERN SPECIES	14544																TBX1 (ENSMEUG00000011624) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000007823	TSSK2 (ENSSHAG00000007923) #10	ENSSHAG00000008002 #9	ENSSHAG00000008223 #11	SLC25A1 (ENSSHAG00000030886) #12	CLTCL1 (ENSSHAG00000008777) #13	ENSSHAG00000009464 #14	ENSSHAG00000010239 #16	ENSSHAG00000021521 #15	UFD1 (ENSSHAG00000010299) #17	CDC45 (ENSSHAG00000010439) #18	CLDN5 (ENSSHAG00000023048) #19	ENSSHAG00000011013	ENSSHAG00000027754 #20	GP1BB (ENSSHAG00000028367) #21	ENSSHAG00000005016 #22	GNB1L (ENSSHAG00000014663) #23	ENSSHAG00000001833 #25	COMT (ENSSHAG00000030258) #26	ARVCF (ENSSHAG00000030473) #27	ENSSHAG00000023797 #28	ENSSHAG00000008680 #28	DGCR8 (ENSSHAG00000002274) #29	TRMT2A (ENSSHAG00000027993) #30	ENSSHAG00000029402	ENSSHAG00000023384 #31	ENSSHAG00000024528 #32	ENSSHAG00000027819	ENSSHAG00000026639	ENSSHAG00000004125	ENSSHAG00000020606
Platypus	MODERN SPECIES	13	ZDHHC8 (ENSOANG00000045746) #32	RANBP1 (ENSOANG00000014576) #31	ENSOANG00000043817	TRMT2A (ENSOANG00000041446) #30	DGCR8 (ENSOANG00000037809) #29	YPEL1 (ENSOANG00000029892)	PPIL2 (ENSOANG00000047102)	HIRA (ENSOANG00000040308) #14	ENSOANG00000039468 #16	C22orf39 (ENSOANG00000046898) #15	UFD1 (ENSOANG00000045527) #17	CDC45 (ENSOANG00000020977) #18	ENSOANG00000044402 #21	SEPTIN5 (ENSOANG00000008487) #20	CLDN5 (ENSOANG00000003574) #19	TBX1 (ENSOANG00000020824) #22	GNB1L (ENSOANG00000013233) #23	TXNRD2 (ENSOANG00000043007) #25	COMT (ENSOANG00000041289) #26	ARVCF (ENSOANG00000038057) #27	TANGO2 (ENSOANG00000038459) #28	MAPK1 (ENSOANG00000037598)	ENSOANG00000039399	TOP3B (ENSOANG00000045186)	SDF2L1 (ENSOANG00000044827)	YDJC (ENSOANG00000043530)	ENSOANG00000008005	SERPIND1 (ENSOANG00000045569)	PI4KA (ENSOANG00000040206)	SNAP29 (ENSOANG00000049507)	ENSOANG00000043472
Sauria	ANCESTRAL SPECIES	11	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Lepidosauria	ANCESTRAL SPECIES	13	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Episquamata	ANCESTRAL SPECIES	10	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Laterata	ANCESTRAL SPECIES	12	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000019300	PPM1F (ENSPMRG00000019302)	MAPK1 (ENSPMRG00000019310)	YPEL1 (ENSPMRG00000019318)	PPIL2 (ENSPMRG00000019332)	ENSPMRG00000019369	HIRA (ENSPMRG00000015491) #14	MRPL40 (ENSPMRG00000015594) #16	C22orf39 (ENSPMRG00000015600) #15	UFD1 (ENSPMRG00000015607) #17	CDC45 (ENSPMRG00000015632) #18	CLDN5 (ENSPMRG00000015756) #19	ENSPMRG00000015777	SEPTIN5 (ENSPMRG00000015832) #20	GP1BB (ENSPMRG00000015868) #21	TBX1 (ENSPMRG00000015885) #22	GNB1L (ENSPMRG00000015903) #23	ENSPMRG00000015913	TXNRD2 (ENSPMRG00000015916) #25	COMT (ENSPMRG00000015933) #26	ARVCF (ENSPMRG00000015986) #27	ENSPMRG00000016121	ENSPMRG00000016129	TANGO2 (ENSPMRG00000016139) #28	ENSPMRG00000016150	DGCR8 (ENSPMRG00000016155) #29	TRMT2A (ENSPMRG00000016210) #30	ENSPMRG00000016444	ZDHHC8 (ENSPMRG00000016456) #32	PGAM5 (ENSPMRG00000016473)	ANKLE2 (ENSPMRG00000016482)
Argentine black and white tegu	MODERN SPECIES	41	SDF2L1 (ENSSMRG00000009648)	TOP3B (ENSSMRG00000009641)	PPM1F (ENSSMRG00000009640)	MAPK1 (ENSSMRG00000009639)	C22orf39 (ENSSMRG00000009637) #15	MRPL40 (ENSSMRG00000009636) #16	HIRA (ENSSMRG00000009632) #14	PPIL2 (ENSSMRG00000009626)	YPEL1 (ENSSMRG00000009624)	UFD1 (ENSSMRG00000009622) #17	CDC45 (ENSSMRG00000009620) #18	CLDN5 (ENSSMRG00000009618) #19	ENSSMRG00000009616	SEPTIN5 (ENSSMRG00000009610) #20	GP1BB (ENSSMRG00000009606) #21	TBX1 (ENSSMRG00000009598) #22	GNB1L (ENSSMRG00000009589) #23	TXNRD2 (ENSSMRG00000008858) #25	COMT (ENSSMRG00000008856) #26	ARVCF (ENSSMRG00000008853) #27	TANGO2 (ENSSMRG00000008824) #28	DGCR8 (ENSSMRG00000008821) #29	ENSSMRG00000008820	TRMT2A (ENSSMRG00000008517) #30	RANBP1 (ENSSMRG00000008510) #31	ZDHHC8 (ENSSMRG00000008504) #32	PGAM5 (ENSSMRG00000008501)	ANKLE2 (ENSSMRG00000008494)	GOLGA3 (ENSSMRG00000008456)	CHFR (ENSSMRG00000008442)	FBRSL1 (ENSSMRG00000008432)
Toxicofera	ANCESTRAL SPECIES	11	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Elapidae	ANCESTRAL SPECIES	31	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.a	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.a #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Elapidae_a	ANCESTRAL SPECIES	79	ENSGT00940000160018	ENSGT00940000156516.d	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.b #23	ENSGT00390000018606.a #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733.i.b #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Blue-lipped sea krait	MODERN SPECIES	2880																TBX1 (ENSLLTG00000017144) #22
Acanthophiinae	ANCESTRAL SPECIES	75	ENSGT00940000160018	ENSGT00940000156516.d	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919.g #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668.b	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606.b #23	ENSGT00390000018606.a #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733.i.b #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT01100000263932	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Mainland tiger snake	MODERN SPECIES	290			MAPK1 (ENSNSUG00000009516)	YPEL1 (ENSNSUG00000009517)	PPIL2 (ENSNSUG00000009518)	HIRA (ENSNSUG00000009519) #14	MRPL40 (ENSNSUG00000009707) #16	C22orf39 (ENSNSUG00000009708) #15	UFD1 (ENSNSUG00000009709) #17	CDC45 (ENSNSUG00000009710) #18	CLDN5 (ENSNSUG00000009711) #19	ENSNSUG00000009713	ENSNSUG00000009714	SEPTIN5 (ENSNSUG00000009716) #20	GP1BB (ENSNSUG00000009733) #21	TBX1 (ENSNSUG00000009734) #22	ENSNSUG00000009735 #23	TXNRD2 (ENSNSUG00000009736) #25	COMT (ENSNSUG00000009737) #26
Indian cobra	MODERN SPECIES	16	YDJC (ENSNNAG00000011568)	SDF2L1 (ENSNNAG00000011586)	TOP3B (ENSNNAG00000011644)	PPM1F (ENSNNAG00000011693)	MAPK1 (ENSNNAG00000011720)	PPIL2 (ENSNNAG00000010191)	HIRA (ENSNNAG00000010271) #14	MRPL40 (ENSNNAG00000011130) #16	C22orf39 (ENSNNAG00000011158) #15	UFD1 (ENSNNAG00000011177) #17	CDC45 (ENSNNAG00000011239) #18	CLDN5 (ENSNNAG00000011688) #19	ENSNNAG00000011740	SEPTIN5 (ENSNNAG00000011916) #20	GP1BB (ENSNNAG00000011996) #21	TBX1 (ENSNNAG00000012016) #22	GNB1L (ENSNNAG00000012051) #23	TXNRD2 (ENSNNAG00000012130) #25	COMT (ENSNNAG00000012952) #26	ARVCF (ENSNNAG00000012973) #27	TANGO2 (ENSNNAG00000013067) #28	DGCR8 (ENSNNAG00000013101) #29	TRMT2A (ENSNNAG00000013153) #30	ENSNNAG00000013172	ENSNNAG00000013184	ZDHHC8 (ENSNNAG00000013201) #32	PGAM5 (ENSNNAG00000013256)	ANKLE2 (ENSNNAG00000013278)	GOLGA3 (ENSNNAG00000013460)	CHFR (ENSNNAG00000013508)	ENSNNAG00000013570
tuatara	MODERN SPECIES	1417	SDF2L1 (ENSSPUG00000015703)	TOP3B (ENSSPUG00000015671)	PPM1F (ENSSPUG00000015642)	MAPK1 (ENSSPUG00000015630)	YPEL1 (ENSSPUG00000015624)	PPIL2 (ENSSPUG00000015614)	ENSSPUG00000015606	HIRA (ENSSPUG00000015576) #14	MRPL40 (ENSSPUG00000015559) #16	C22orf39 (ENSSPUG00000015555) #15	UFD1 (ENSSPUG00000015540) #17	CDC45 (ENSSPUG00000015397) #18	CLDN5 (ENSSPUG00000015373) #19	ENSSPUG00000015358	SEPTIN5 (ENSSPUG00000015346) #20	TBX1 (ENSSPUG00000015171) #22	GNB1L (ENSSPUG00000015114) #23	TXNRD2 (ENSSPUG00000015085) #25	COMT (ENSSPUG00000015073) #26	ARVCF (ENSSPUG00000015048) #27	TANGO2 (ENSSPUG00000015039) #28	DGCR8 (ENSSPUG00000014967) #29	TRMT2A (ENSSPUG00000014938) #30	RANBP1 (ENSSPUG00000014907) #31	ZDHHC8 (ENSSPUG00000014890) #32	PGAM5 (ENSSPUG00000014881)	ANKLE2 (ENSSPUG00000014865)	GOLGA3 (ENSSPUG00000014748)	ENSSPUG00000014731	ENSSPUG00000014722	FBRSL1 (ENSSPUG00000014703)
Archelosauria	ANCESTRAL SPECIES	14	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Archosauria	ANCESTRAL SPECIES	19	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Aves	ANCESTRAL SPECIES	19	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neognathae	ANCESTRAL SPECIES	15	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Galloanserae	ANCESTRAL SPECIES	13	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Phasianidae	ANCESTRAL SPECIES	13	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Phasianidae_b	ANCESTRAL SPECIES	13	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Chicken	MODERN SPECIES	6	SDF2L1 (ENSGALG00010024330)	TOP3B (ENSGALG00010024339)	PPM1F (ENSGALG00010024346)	MAPK3 (ENSGALG00010024358)	YPEL1 (ENSGALG00010024371)	PPIL2 (ENSGALG00010024387)	HIRA (ENSGALG00010024407) #14	MRPL40 (ENSGALG00010024425) #16	C22orf39 (ENSGALG00010024427) #15	UFD1L (ENSGALG00010024439) #17	CDC45 (ENSGALG00010024480) #18	CLDN5 (ENSGALG00010024495) #19	SEPTIN2L (ENSGALG00010027003)	SEPTIN5 (ENSGALG00010024509) #20	GP1BB (ENSGALG00010024525) #21	TBX1 (ENSGALG00010024528) #22	GNB1L (ENSGALG00010024549) #23	TXNRD2 (ENSGALG00010024575) #25	COMT (ENSGALG00010024592) #26	ARVCF (ENSGALG00010024616) #27	TANGO2 (ENSGALG00010024628) #28	DGCR8 (ENSGALG00010020797) #29	TRMT2A (ENSGALG00010020816) #30	RANBP1 (ENSGALG00010020833) #31	ZDHHC8 (ENSGALG00010021057) #32	ENSGALG00010021063	PGAM5 (ENSGALG00010021069)	ANKLE2 (ENSGALG00010021088)	GOLGA3 (ENSGALG00010021102)	CHFR (ENSGALG00010021134)	FBRSL1 (ENSGALG00010022226)
Japanese quail	MODERN SPECIES	6	YDJC (ENSCJPG00005019012)	SDF2L1 (ENSCJPG00005019013)	TOP3B (ENSCJPG00005019017)	PPM1F (ENSCJPG00005019018)	MAPK1 (ENSCJPG00005019019)	YPEL1 (ENSCJPG00005019020)	PPIL2 (ENSCJPG00005019021)	HIRA (ENSCJPG00005019052) #14	MRPL40 (ENSCJPG00005019053) #16	UFD1 (ENSCJPG00005019054) #17	CDC45 (ENSCJPG00005019055) #18	CLDN5 (ENSCJPG00005019056) #19	ENSCJPG00005019057	SEPTIN5 (ENSCJPG00005019059) #20	GP1BB (ENSCJPG00005019060) #21	TBX1 (ENSCJPG00005019062) #22	GNB1L (ENSCJPG00005019063) #23	TXNRD2 (ENSCJPG00005019064) #25	COMT (ENSCJPG00005019104) #26	ARVCF (ENSCJPG00005019105) #27	TANGO2 (ENSCJPG00005019153) #28	DGCR8 (ENSCJPG00005019155) #29	TRMT2A (ENSCJPG00005019158) #30	ENSCJPG00005019159	RANBP1 (ENSCJPG00005019160) #31	ZDHHC8 (ENSCJPG00005019162) #32	PGAM5 (ENSCJPG00005019163)	ANKLE2 (ENSCJPG00005019164)	GOLGA3 (ENSCJPG00005019165)	CHFR (ENSCJPG00005019219)	FBRSL1 (ENSCJPG00005019229)
Anatidae	ANCESTRAL SPECIES	25	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00910000148339	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Duck	MODERN SPECIES	7	SDF2L1 (ENSAPLG00000005254)	TOP3B (ENSAPLG00000005306)	PPM1F (ENSAPLG00000006074)	MAPK1 (ENSAPLG00000006116)	YPEL1 (ENSAPLG00000026762)	PPIL2 (ENSAPLG00000005026)	ENSAPLG00000024984	HIRA (ENSAPLG00000004150) #14	MRPL40 (ENSAPLG00000004002) #16	C22orf39 (ENSAPLG00000000942) #15	UFD1 (ENSAPLG00000003494) #17	CLDN5 (ENSAPLG00000024722) #19	CDC45 (ENSAPLG00000016068) #18	SEPTIN5 (ENSAPLG00000016224) #20	GP1BB (ENSAPLG00000002296) #21	TBX1 (ENSAPLG00000023700) #22	GNB1L (ENSAPLG00000002318) #23	TXNRD2 (ENSAPLG00000002411) #25	COMT (ENSAPLG00000002789) #26	ARVCF (ENSAPLG00000002841) #27	TANGO2 (ENSAPLG00000003711) #28	DGCR8 (ENSAPLG00000004281) #29	ENSAPLG00000025595	TRMT2A (ENSAPLG00000004108) #30	RANBP1 (ENSAPLG00000003954) #31	ZDHHC8 (ENSAPLG00000003758) #32	PGAM5 (ENSAPLG00000003722)	ANKLE2 (ENSAPLG00000003408)	GOLGA3 (ENSAPLG00000003277)	CHFR (ENSAPLG00000002931)	FBRSL1 (ENSAPLG00000002858)
Pink-footed goose	MODERN SPECIES	60	SDF2L1 (ENSABRG00000014402)	TOP3B (ENSABRG00000014415)	PPM1F (ENSABRG00000014549)	MAPK1 (ENSABRG00000014553)	YPEL1 (ENSABRG00000014559)	PPIL2 (ENSABRG00000014570)	HIRA (ENSABRG00000014830) #14	MRPL40 (ENSABRG00000014886) #16	C22orf39 (ENSABRG00000014887) #15	UFD1 (ENSABRG00000014919) #17	CDC45 (ENSABRG00000015254) #18	CLDN5 (ENSABRG00000015291) #19	ENSABRG00000015294	SEPTIN5 (ENSABRG00000015305) #20	GP1BB (ENSABRG00000015314) #21	TBX1 (ENSABRG00000015316) #22	GNB1L (ENSABRG00000015322) #23	TXNRD2 (ENSABRG00000015330) #25	COMT (ENSABRG00000015450) #26	ARVCF (ENSABRG00000015471) #27	TANGO2 (ENSABRG00000015481) #28	DGCR8 (ENSABRG00000015489) #29	TRMT2A (ENSABRG00000015699) #30	RANBP1 (ENSABRG00000015749) #31	ZDHHC8 (ENSABRG00000015760) #32	PGAM5 (ENSABRG00000015763)	ANKLE2 (ENSABRG00000015773)	GOLGA3 (ENSABRG00000016040)	CHFR (ENSABRG00000016290)	FBRSL1 (ENSABRG00000016430)	GALNT9 (ENSABRG00000016507)
Neognathae_b	ANCESTRAL SPECIES	27	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neognathae_c	ANCESTRAL SPECIES	16	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT01100000263932	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Kakapo	MODERN SPECIES	3	SDF2L1 (ENSSHBG00005009225)	TOP3B (ENSSHBG00005009182)	PPM1F (ENSSHBG00005009172)	MAPK1 (ENSSHBG00005009151)	YPEL1 (ENSSHBG00005000957)	PPIL2 (ENSSHBG00005018275)	HIRA (ENSSHBG00005018270) #14	MRPL40 (ENSSHBG00005018265) #16	C22orf39 (ENSSHBG00005018264) #15	UFD1 (ENSSHBG00005018257) #17	CDC45 (ENSSHBG00005018247) #18	CLDN5 (ENSSHBG00005018240) #19	ENSSHBG00005018237	SEPTIN5 (ENSSHBG00005018234) #20	GP1BB (ENSSHBG00005018232) #21	TBX1 (ENSSHBG00005018229) #22	GNB1L (ENSSHBG00005018226) #23	TXNRD2 (ENSSHBG00005018221) #25	COMT (ENSSHBG00005018218) #26	ARVCF (ENSSHBG00005018194) #27	TANGO2 (ENSSHBG00005018182) #28	DGCR8 (ENSSHBG00005018175) #29	TRMT2A (ENSSHBG00005018166) #30	RANBP1 (ENSSHBG00005018157) #31	ZDHHC8 (ENSSHBG00005018153) #32	PGAM5 (ENSSHBG00005018149)	ANKLE2 (ENSSHBG00005018143)	GOLGA3 (ENSSHBG00005017108)	CHFR (ENSSHBG00005017001)	FBRSL1 (ENSSHBG00005016988)	GALNT9 (ENSSHBG00005016981)
Golden eagle	MODERN SPECIES	25	SDF2L1 (ENSACCG00020003830)	TOP3B (ENSACCG00020003778)	PPM1F (ENSACCG00020003758)	MAPK1 (ENSACCG00020003738)	YPEL1 (ENSACCG00020003724)	PPIL2 (ENSACCG00020003705)	HIRA (ENSACCG00020003675) #14	MRPL40 (ENSACCG00020003653) #16	C22orf39 (ENSACCG00020003645) #15	UFD1 (ENSACCG00020003625) #17	CDC45 (ENSACCG00020003595) #18	CLDN5 (ENSACCG00020003572) #19	ENSACCG00020003549	SEPTIN5 (ENSACCG00020003519) #20	GP1BB (ENSACCG00020003504) #21	TBX1 (ENSACCG00020003493) #22	GNB1L (ENSACCG00020003467) #23	TXNRD2 (ENSACCG00020003433) #25	COMT (ENSACCG00020003409) #26	ENSACCG00020003363 #27	ENSACCG00020003318 #27	TANGO2 (ENSACCG00020003304) #28	DGCR8 (ENSACCG00020003266) #29	ENSACCG00020003249	TRMT2A (ENSACCG00020003237) #30	RANBP1 (ENSACCG00020003222) #31	ZDHHC8 (ENSACCG00020003211) #32	PGAM5 (ENSACCG00020003198)	ANKLE2 (ENSACCG00020003179)	GOLGA3 (ENSACCG00020002969)	CHFR (ENSACCG00020002595)
Passeriformes	ANCESTRAL SPECIES	15	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00970000193655	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Great tit	MODERN SPECIES	6	SDF2L1 (ENSPMJG00000014277)	TOP3B (ENSPMJG00000014271)	PPM1F (ENSPMJG00000014270)	MAPK1 (ENSPMJG00000014268)	YPEL1 (ENSPMJG00000014267)	PPIL2 (ENSPMJG00000014263)	HIRA (ENSPMJG00000014257) #14	MRPL40 (ENSPMJG00000014255) #16	UFD1 (ENSPMJG00000014253) #17	CDC45 (ENSPMJG00000014244) #18	CLDN5 (ENSPMJG00000014243) #19	ENSPMJG00000014238	SEPTIN5 (ENSPMJG00000014235) #20	ENSPMJG00000014233 #21	ENSPMJG00000014230	TBX1 (ENSPMJG00000014229) #22	GNB1L (ENSPMJG00000014228) #23	TXNRD2 (ENSPMJG00000014227) #25	COMT (ENSPMJG00000014222) #26	ENSPMJG00000014220 #27	ENSPMJG00000014218 #27	TANGO2 (ENSPMJG00000014215) #28	DGCR8 (ENSPMJG00000014211) #29	ENSPMJG00000014210	TRMT2A (ENSPMJG00000014209) #30	RANBP1 (ENSPMJG00000014206) #31	ZDHHC8 (ENSPMJG00000014205) #32	PGAM5 (ENSPMJG00000014203)	ANKLE2 (ENSPMJG00000014202)	GOLGA3 (ENSPMJG00000014194)	CHFR (ENSPMJG00000014183)
Passeriformes_d	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796.v	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Flycatcher	MODERN SPECIES	6	ENSFALG00000024195	ENSFALG00000007880	SDF2L1 (ENSFALG00000007890)	TOP3B (ENSFALG00000007908)	PPM1F (ENSFALG00000007926)	MAPK1 (ENSFALG00000007935)	YPEL1 (ENSFALG00000028339)	PPIL2 (ENSFALG00000007955)	HIRA (ENSFALG00000007974) #14	MRPL40 (ENSFALG00000023636) #16	UFD1 (ENSFALG00000007990) #17	CDC45 (ENSFALG00000007995) #18	CLDN5 (ENSFALG00000014507) #19	SEPTIN5 (ENSFALG00000008028) #20	GP1BB (ENSFALG00000014523) #21	TBX1 (ENSFALG00000027012) #22	GNB1L (ENSFALG00000008056) #23	TXNRD2 (ENSFALG00000008065) #25	COMT (ENSFALG00000008069) #26	ARVCF (ENSFALG00000008093) #27	TANGO2 (ENSFALG00000027944) #28	TRMT2A (ENSFALG00000008162) #30	DGCR8 (ENSFALG00000008149) #29	ENSFALG00000008187 #32	ENSFALG00000027639	ENSFALG00000026312	ANKLE2 (ENSFALG00000008217)	GOLGA3 (ENSFALG00000008223)	CHFR (ENSFALG00000008235)	FBRSL1 (ENSFALG00000008244)	GALNT9 (ENSFALG00000025740)
Passeriformes_g	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Passeroidea	ANCESTRAL SPECIES	14	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00970000193655	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796.u	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Zebra finch	MODERN SPECIES	6	SDF2L1 (ENSTGUG00000008678)	TOP3B (ENSTGUG00000008644)	PPM1F (ENSTGUG00000026544)	MAPK1 (ENSTGUG00000008602)	YPEL1 (ENSTGUG00000023955)	PPIL2 (ENSTGUG00000008567)	HIRA (ENSTGUG00000008538) #14	MRPL40 (ENSTGUG00000008534) #16	C22orf39 (ENSTGUG00000008531) #15	UFD1 (ENSTGUG00000008505) #17	CDC45 (ENSTGUG00000008459) #18	CLDN5 (ENSTGUG00000024890) #19	ENSTGUG00000008445	SEPTIN5 (ENSTGUG00000008412) #20	GP1BB (ENSTGUG00000028476) #21	TBX1 (ENSTGUG00000008395) #22	GNB1L (ENSTGUG00000029275) #23	TXNRD2 (ENSTGUG00000008350) #25	COMT (ENSTGUG00000021688) #26	ARVCF (ENSTGUG00000008310) #27	TANGO2 (ENSTGUG00000023918) #28	DGCR8 (ENSTGUG00000026902) #29	TRMT2A (ENSTGUG00000025321) #30	RANBP1 (ENSTGUG00000008294) #31	ZDHHC8 (ENSTGUG00000008274) #32	PGAM5 (ENSTGUG00000008267)	ANKLE2 (ENSTGUG00000008251)	GOLGA3 (ENSTGUG00000008219)	CHFR (ENSTGUG00000008181)	FBRSL1 (ENSTGUG00000008161)	GALNT9 (ENSTGUG00000008131)
Common canary	MODERN SPECIES	18	YDJC (ENSSCAG00000004645)	SDF2L1 (ENSSCAG00000004647)	TOP3B (ENSSCAG00000004656)	PPM1F (ENSSCAG00000004660)	MAPK1 (ENSSCAG00000004664)	YPEL1 (ENSSCAG00000004670)	PPIL2 (ENSSCAG00000004674)	HIRA (ENSSCAG00000004679) #14	MRPL40 (ENSSCAG00000004687) #16	ENSSCAG00000004688 #15	UFD1 (ENSSCAG00000004690) #17	CDC45 (ENSSCAG00000004694) #18	ENSSCAG00000004699	SEPTIN5 (ENSSCAG00000004702) #20	GP1BB (ENSSCAG00000004704) #21	TBX1 (ENSSCAG00000004709) #22	GNB1L (ENSSCAG00000004716) #23	TXNRD2 (ENSSCAG00000004728) #25	COMT (ENSSCAG00000004738) #26	ARVCF (ENSSCAG00000004744) #27	TANGO2 (ENSSCAG00000004750) #28	DGCR8 (ENSSCAG00000004756) #29	TRMT2A (ENSSCAG00000004763) #30	ENSSCAG00000004768	RANBP1 (ENSSCAG00000004771) #31	ZDHHC8 (ENSSCAG00000004783) #32	PGAM5 (ENSSCAG00000004789)	ANKLE2 (ENSSCAG00000004790)	GOLGA3 (ENSSCAG00000004796)	CHFR (ENSSCAG00000004818)	FBRSL1 (ENSSCAG00000004832)
Medium ground finch	MODERN SPECIES	33	ENSGFOG00000000284	YDJC (ENSGFOG00000000277)	SDF2L1 (ENSGFOG00000000267)	TOP3B (ENSGFOG00000000246)	PPM1F (ENSGFOG00000000237)	MAPK1 (ENSGFOG00000000227)	YPEL1 (ENSGFOG00000000215)	PPIL2 (ENSGFOG00000000205)	HIRA (ENSGFOG00000000185) #14	MRPL40 (ENSGFOG00000000175) #16	UFD1 (ENSGFOG00000000172) #17	CDC45 (ENSGFOG00000000163) #18	ENSGFOG00000000148	SEPTIN5 (ENSGFOG00000000119) #20	GP1BB (ENSGFOG00000000108) #21	TBX1 (ENSGFOG00000000104) #22	GNB1L (ENSGFOG00000000097) #23	TXNRD2 (ENSGFOG00000008851) #25	COMT (ENSGFOG00000008830) #26	ARVCF (ENSGFOG00000008748) #27	TANGO2 (ENSGFOG00000008719) #28	DGCR8 (ENSGFOG00000008706) #29	TRMT2A (ENSGFOG00000008593) #30	RANBP1 (ENSGFOG00000008539) #31	ZDHHC8 (ENSGFOG00000008532) #32	PGAM5 (ENSGFOG00000008526)	ANKLE2 (ENSGFOG00000008520)	GOLGA3 (ENSGFOG00000008501)	CHFR (ENSGFOG00000008484)	FBRSL1 (ENSGFOG00000008443)	ENSGFOG00000008434
Cryptodira	ANCESTRAL SPECIES	28	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Testudinoidea	ANCESTRAL SPECIES	26	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Testudinidae	ANCESTRAL SPECIES	32	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832.e #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Goode s thornscrub tortoise	MODERN SPECIES	4	SDF2L1 (ENSGEVG00005010655)	TOP3B (ENSGEVG00005010517)	PPM1F (ENSGEVG00005010482)	MAPK1 (ENSGEVG00005010443)	YPEL1 (ENSGEVG00005010427)	PPIL2 (ENSGEVG00005010363)	HIRA (ENSGEVG00005010294) #14	MRPL40 (ENSGEVG00005010273) #16	C22orf39 (ENSGEVG00005010249) #15	UFD1 (ENSGEVG00005010153) #17	CDC45 (ENSGEVG00005009692) #18	CLDN5 (ENSGEVG00005009598) #19	ENSGEVG00005009572	SEPTIN5 (ENSGEVG00005020840) #20	GP1BB (ENSGEVG00005020833) #21	TBX1 (ENSGEVG00005020830) #22	GNB1L (ENSGEVG00005020821) #23	TXNRD2 (ENSGEVG00005020803) #25	COMT (ENSGEVG00005020794) #26	ARVCF (ENSGEVG00005020783) #27	TANGO2 (ENSGEVG00005020772) #28	DGCR8 (ENSGEVG00005020763) #29	TRMT2A (ENSGEVG00005020759) #30	RANBP1 (ENSGEVG00005020755) #31	ZDHHC8 (ENSGEVG00005020749) #32	PGAM5 (ENSGEVG00005020745)	ANKLE2 (ENSGEVG00005020740)	GOLGA3 (ENSGEVG00005020729)	CHFR (ENSGEVG00005020717)	FBRSL1 (ENSGEVG00005020705)	GALNT9 (ENSGEVG00005020699)
Abingdon island giant tortoise	MODERN SPECIES	41	TOP3B (ENSCABG00000020648)	PPM1F (ENSCABG00000020750)	ENSCABG00000020752	MAPK1 (ENSCABG00000020755)	YPEL1 (ENSCABG00000020760)	PPIL2 (ENSCABG00000020779)	HIRA (ENSCABG00000020900) #14	MRPL40 (ENSCABG00000020918) #16	C22orf39 (ENSCABG00000020932) #15	UFD1 (ENSCABG00000020940) #17	CDC45 (ENSCABG00000020946) #18	CLDN5 (ENSCABG00000020954) #19	ENSCABG00000020955	SEPTIN5 (ENSCABG00000020957) #20	GP1BB (ENSCABG00000020960) #21	TBX1 (ENSCABG00000020963) #22	GNB1L (ENSCABG00000020967) #23
Emydidae	ANCESTRAL SPECIES	37	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Three-toed box turtle	MODERN SPECIES	109	TOP3B (ENSTMTG00000006641)	PPM1F (ENSTMTG00000006621)	MAPK1 (ENSTMTG00000006600)	YPEL1 (ENSTMTG00000006588)	ENSTMTG00000006576	PPIL2 (ENSTMTG00000006549)	HIRA (ENSTMTG00000006496) #14	MRPL40 (ENSTMTG00000006483) #16	C22orf39 (ENSTMTG00000006471) #15	UFD1 (ENSTMTG00000006450) #17	CDC45 (ENSTMTG00000006349) #18	CLDN5 (ENSTMTG00000006328) #19	ENSTMTG00000006318	SEPTIN5 (ENSTMTG00000006302) #20	GP1BB (ENSTMTG00000006293) #21	TBX1 (ENSTMTG00000006219) #22	GNB1L (ENSTMTG00000006189) #23	TXNRD2 (ENSTMTG00000006150) #25	COMT (ENSTMTG00000006124) #26	ENSTMTG00000006082 #27	ENSTMTG00000006066 #27	TANGO2 (ENSTMTG00000006032) #28	DGCR8 (ENSTMTG00000005978) #29	TRMT2A (ENSTMTG00000005948) #30	RANBP1 (ENSTMTG00000005921) #31	ZDHHC8 (ENSTMTG00000005901) #32	PGAM5 (ENSTMTG00000005881)	ANKLE2 (ENSTMTG00000005808)	GOLGA3 (ENSTMTG00000005713)	CHFR (ENSTMTG00000005664)	FBRSL1 (ENSTMTG00000005619)
painted turtle	MODERN SPECIES	712	SDF2L1 (ENSCPBG00000010543)	TOP3B (ENSCPBG00000010556)	PPM1F (ENSCPBG00000010561)	MAPK1 (ENSCPBG00000010567)	YPEL1 (ENSCPBG00000010573)	PPIL2 (ENSCPBG00000010578)	HIRA (ENSCPBG00000010600) #14	MRPL40 (ENSCPBG00000010618) #16	C22orf39 (ENSCPBG00000010621) #15	UFD1 (ENSCPBG00000010625) #17	CDC45 (ENSCPBG00000010632) #18	CLDN5 (ENSCPBG00000010642) #19	ENSCPBG00000010648	SEPTIN5 (ENSCPBG00000010660) #20	ENSCPBG00000010670 #21	TBX1 (ENSCPBG00000010673) #22	GNB1L (ENSCPBG00000010679) #23	TXNRD2 (ENSCPBG00000010687) #25	COMT (ENSCPBG00000010707) #26	ARVCF (ENSCPBG00000010719) #27	ENSCPBG00000010734	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010743	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010762	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010780	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010802	ENSCPBG00000010809	ENSCPBG00000010822
Chinese turtle	MODERN SPECIES	802														ENSPSIG00000001452	ENSPSIG00000001460	TBX1 (ENSPSIG00000008075) #22	GNB1L (ENSPSIG00000008292) #23
Anura	ANCESTRAL SPECIES	4	ENSGT00940000160018	ENSGT00940000156516	ENSGT00940000158884	ENSGT00940000156771	ENSGT00940000161453	ENSGT00940000153189.A	ENSGT00550000074919 #14	ENSGT00390000010239 #16	ENSGT00390000002511 #15	ENSGT00390000002408 #17	ENSGT00390000009662 #18	ENSGT00940000161769 #19	ENSGT00940000164668	ENSGT00940000159913 #20	ENSGT00530000064244.b #21	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000155317.b.b #26	ENSGT00940000155317.b.a.a #26	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Frog	MODERN SPECIES		ydjc (ENSXETG00000022426)	sdf2l1 (ENSXETG00000018564)	egfl7 (ENSXETG00000018565)	ppm1f (ENSXETG00000018572)	mapk1 (ENSXETG00000018576)	ypel1 (ENSXETG00000024940)	ppil2 (ENSXETG00000018594)	hira (ENSXETG00000018598) #14	mrpl40 (ENSXETG00000018600) #16	c22orf39 (ENSXETG00000036919) #15	ufd1 (ENSXETG00000018601) #17	cdc45 (ENSXETG00000018602) #18	cldn5 (ENSXETG00000047956) #19	septin5 (ENSXETG00000030888)	gp1bb (ENSXETG00000034628) #21	tbx1 (ENSXETG00000039391) #22	gnb1l (ENSXETG00000006305) #23	txnrd2 (ENSXETG00000006307) #25	comt (ENSXETG00000006315) #26	comt.2 (ENSXETG00000024946) #26	ENSXETG00000033321 #26	arvcf (ENSXETG00000006316) #27	tango2 (ENSXETG00000006319) #28	dgcr8 (ENSXETG00000006320) #29	ENSXETG00000041542	trmt2a (ENSXETG00000006323) #30	ENSXETG00000040329	ranbp1 (ENSXETG00000034836)	pgam5 (ENSXETG00000023845) #32	ankle2 (ENSXETG00000023848)	golga3 (ENSXETG00000023849)
Leishan spiny toad	MODERN SPECIES		MRPL40 (ENSLLEG00000007785) #16	C22orf39 (ENSLLEG00000007764) #15	ENSLLEG00000007745	ENSLLEG00000007722	UFD1 (ENSLLEG00000007650) #17	CDC45 (ENSLLEG00000007462) #18	ENSLLEG00000007427	CLDN5 (ENSLLEG00000007411) #19	ENSLLEG00000007380	ENSLLEG00000007374	ENSLLEG00000006878	SEPTIN5 (ENSLLEG00000006544) #20	GP1BB (ENSLLEG00000006477) #21	ENSLLEG00000006469	ENSLLEG00000006448	TBX1 (ENSLLEG00000006268) #22	ENSLLEG00000006246	ENSLLEG00000006233	GNB1L (ENSLLEG00000006175) #23	TXNRD2 (ENSLLEG00000006086) #25	ENSLLEG00000006036 #26	ENSLLEG00000006012	ENSLLEG00000005976 #26	ENSLLEG00000005960	ENSLLEG00000005884 #26	ENSLLEG00000005861	ENSLLEG00000005845	ARVCF (ENSLLEG00000005551) #27	ENSLLEG00000005495	TANGO2 (ENSLLEG00000005398) #28	DGCR8 (ENSLLEG00000005288) #29
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2584													ENSLACG00000007648	CTNND1 (ENSLACG00000006081)	FTSJ3 (ENSLACG00000005523)	ENSLACG00000004994 #22	CABP4 (ENSLACG00000004697)	ENSLACG00000004017	ENSLACG00000003373	ENSLACG00000002958	TIMM10 (ENSLACG00000002468)	SLC43A1 (ENSLACG00000000742)
Coelacanth	MODERN SPECIES	281	PPM1F (ENSLACG00000013822)	MAPK1 (ENSLACG00000013972)	ENSLACG00000014276	PPIL2 (ENSLACG00000014641)	ENSLACG00000014938	HIRA (ENSLACG00000014956) #14	MRPL40 (ENSLACG00000015070) #16	C22orf39 (ENSLACG00000015095) #15	UFD1 (ENSLACG00000015135) #17	CDC45 (ENSLACG00000015166) #18	CLDN5 (ENSLACG00000015285) #19	zgc:63587 (ENSLACG00000015335)	SEPTIN5 (ENSLACG00000015559) #20	GP1BB (ENSLACG00000022424) #21	ENSLACG00000015988	TBX1 (ENSLACG00000016333) #22	GNB1L (ENSLACG00000016464) #23	TXNRD2 (ENSLACG00000016608) #25	ENSLACG00000016734 #26	ARVCF (ENSLACG00000016764) #27	TANGO2 (ENSLACG00000017405) #28	DGCR8 (ENSLACG00000017462) #29	TRMT2A (ENSLACG00000017494) #30	RANBP1 (ENSLACG00000017512) #31	ZDHHC8 (ENSLACG00000017552) #32	PGAM5 (ENSLACG00000017696)	GOLGA3 (ENSLACG00000017720)	ANKLE2 (ENSLACG00000017772)	ENSLACG00000017838	ENSLACG00000017852	CHFR (ENSLACG00000017864)
Actinopterygii	ANCESTRAL SPECIES	22	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00990000204357	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Neopterygii	ANCESTRAL SPECIES	14	ENSGT00940000161453	ENSGT00940000156771	ENSGT00940000158884	ENSGT00940000156516	ENSGT00990000204357	ENSGT00940000160018	ENSGT00390000002575	ENSGT00940000153654	ENSGT00940000159978	ENSGT00550000074798.a.a	ENSGT00940000158664	ENSGT00950000182843.a.b	ENSGT00390000008325.a	ENSGT00550000074856 #12	ENSGT00950000183166.a.b #13	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027 #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00870000136917
Osteoglossocephalai	ANCESTRAL SPECIES	5	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	19	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299.e	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b.a #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000165623	ENSGT00730000110943.B.d.b.b
Asian bonytongue	MODERN SPECIES	3	bmp10 (ENSSFOG00015029317)	arhgap25 (ENSSFOG00015018394)	cds2 (ENSSFOG00015030400)	zgc:65851 (ENSSFOG00015018334)	MXD1 (ENSSFOG00015018325)	snrnp27 (ENSSFOG00015018311)	add2 (ENSSFOG00015018266)	figla (ENSSFOG00015018250)	hk2 (ENSSFOG00015018184)	NPFFR1 (ENSSFOG00015017979)	tet3 (ENSSFOG00015017946)	ap3m2 (ENSSFOG00015017909)	kat6a (ENSSFOG00015028324)	ENSSFOG00015017836	sema4c (ENSSFOG00015017817)	tbx1 (ENSSFOG00015017805) #22	gnb1l (ENSSFOG00015017782) #23	TXNRD2 (ENSSFOG00015017725) #25	arvcfb (ENSSFOG00015017612) #27	tango2 (ENSSFOG00015032693) #28	dgcr8 (ENSSFOG00015017499) #29	ENSSFOG00015017493	trmt2a (ENSSFOG00015017419) #30	RANBP1 (ENSSFOG00015017322) #31	zdhhc8b (ENSSFOG00015017216) #32	pgam5 (ENSSFOG00015025983)	ankle2 (ENSSFOG00015017117)	golga3 (ENSSFOG00015016992)	chfr (ENSSFOG00015016911)	FBRSL1 (ENSSFOG00015029146)	GALNT9 (ENSSFOG00015016856)
P. kingsleyae	MODERN SPECIES	131					add2 (ENSPKIG00000011946)	figla (ENSPKIG00000011920)	ENSPKIG00000011693	hk2 (ENSPKIG00000011519)	NPFFR1 (ENSPKIG00000011483)	ENSPKIG00000011463	tet3 (ENSPKIG00000011353)	ap3m2 (ENSPKIG00000011261)	kat6a (ENSPKIG00000011149)	ENSPKIG00000011056	sema4c (ENSPKIG00000011012)	tbx1 (ENSPKIG00000010974) #22	gnb1l (ENSPKIG00000010949) #23	TXNRD2 (ENSPKIG00000010831) #25	ENSPKIG00000010768	ARVCF (ENSPKIG00000010527) #27	tango2 (ENSPKIG00000010409) #28	dgcr8 (ENSPKIG00000010338) #29	trmt2a (ENSPKIG00000010268) #30	ENSPKIG00000010230	RANBP1 (ENSPKIG00000010195) #31	zdhhc8b (ENSPKIG00000010158) #32	pgam5 (ENSPKIG00000010127)	ankle2 (ENSPKIG00000010084)	golga3 (ENSPKIG00000009961)	chfr (ENSPKIG00000009865)	FBRSL1 (ENSPKIG00000009663)
Osteoglossiformes	ANCESTRAL SPECIES	47	ENSGT00940000166787	ENSGT00940000153340.B	ENSGT00940000157856	ENSGT00390000014879.c.a.a.a	ENSGT00940000156185	ENSGT00390000006707	ENSGT00390000011206.a	ENSGT00390000006867	ENSGT00390000001280.b	ENSGT00940000154779.a.b.a	ENSGT00390000014909	ENSGT00940000166216	ENSGT00950000182904.a.b.a	ENSGT00940000159299.f	ENSGT01070000253744.b.a.a.a.a	ENSGT00940000154816.a.b.b #22	ENSGT00940000157027.n.b.g #27	ENSGT00940000158044.b ##32	ENSGT00940000160709	ENSGT00940000156599	ENSGT00730000110943.B.d.b.a	ENSGT00940000158390.n	ENSGT00390000017751.l	ENSGT00940000155882.a.b.b	ENSGT00940000160605.h	ENSGT00940000155735.r	ENSGT00420000029890	ENSGT00940000155845.t	ENSGT00940000159368.a	ENSGT00390000009869	ENSGT00390000014052
P. kingsleyae	MODERN SPECIES	2	drg1 (ENSPKIG00000022572)	STARD7 (ENSPKIG00000022629)	SLC20A1 (ENSPKIG00000022658)	gmcl1 (ENSPKIG00000022681)	fam136a (ENSPKIG00000022708)	pcyox1 (ENSPKIG00000022738)	DTWD2 (ENSPKIG00000022765)	snx24 (ENSPKIG00000022799)	loxa (ENSPKIG00000022841)	GGCX (ENSPKIG00000022863)	ska1 (ENSPKIG00000022897)	ENSPKIG00000022915	KCNN2 (ENSPKIG00000022932)	ADD2 (ENSPKIG00000022954)	npffr1l3 (ENSPKIG00000023004)	tbx1 (ENSPKIG00000023058) #22	ARVCF (ENSPKIG00000023100) #27	ENSPKIG00000023156 ##32	PGAM5 (ENSPKIG00000023184)	ANKLE2 (ENSPKIG00000023197)	FBRSL1 (ENSPKIG00000023251)	GALNT9 (ENSPKIG00000023350)	SUSD2 (ENSPKIG00000023406)	kremen1 (ENSPKIG00000023462)	ZNRF3 (ENSPKIG00000023489)	xbp1 (ENSPKIG00000023506)	hspb15 (ENSPKIG00000023519)	HSPB8 (ENSPKIG00000023530)	ENSPKIG00000023541	ENSPKIG00000023554	tescb (ENSPKIG00000023600)
Asian bonytongue	MODERN SPECIES	21	slc20a1b (ENSSFOG00015016452)	gmcl1 (ENSSFOG00015016487)	fam136a (ENSSFOG00015025273)	pcyox1 (ENSSFOG00015016539)	DTWD2 (ENSSFOG00015032604)	snx24 (ENSSFOG00015016591)	loxa (ENSSFOG00015025004)	GGCX (ENSSFOG00015016692)	ska1 (ENSSFOG00015026613)	ENSSFOG00015026855	smarcad1a (ENSSFOG00015016814)	KCNN2 (ENSSFOG00015016842)	BMP10 (ENSSFOG00015016881)	ADD2 (ENSSFOG00015016901)	NPFFR1 (ENSSFOG00015016915)	tbx1 (ENSSFOG00015027302) #22	ARVCF (ENSSFOG00015016993) #27	ENSSFOG00015027703 ##32	PGAM5 (ENSSFOG00015017014)	ANKLE2 (ENSSFOG00015017024)	FBRSL1 (ENSSFOG00015031341)	GALNT9 (ENSSFOG00015017067)	SUSD2 (ENSSFOG00015017104)	kremen1 (ENSSFOG00015017139)	xbp1 (ENSSFOG00015017151)	hspb15 (ENSSFOG00015017164)	HSPB8 (ENSSFOG00015029913)	ENSSFOG00015031951	TAOK3 (ENSSFOG00015017178)	m17 (ENSSFOG00015026889)	tescb (ENSSFOG00015017213)
Clupeocephala	ANCESTRAL SPECIES	29	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Acanthomorphata	ANCESTRAL SPECIES	46	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Pinecone sodierfish	MODERN SPECIES	23	cds2 (ENSMMDG00005023448)	zgc:65851 (ENSMMDG00005023430)	MXD1 (ENSMMDG00005023425)	snrnp27 (ENSMMDG00005023424)	add2 (ENSMMDG00005023423)	figla (ENSMMDG00005023421)	hk2 (ENSMMDG00005021996)	ENSMMDG00005021917	tet3 (ENSMMDG00005021857)	ap3m2 (ENSMMDG00005021855)	ENSMMDG00005021852	ENSMMDG00005021850	ENSMMDG00005021848	ENSMMDG00005021845	sema4c (ENSMMDG00005021843)	tbx1 (ENSMMDG00005021841) #22	gnb1l (ENSMMDG00005021837) #23	TXNRD2 (ENSMMDG00005021329) #25	arvcfb (ENSMMDG00005020533) #27	tango2 (ENSMMDG00005020494) #28	dgcr8 (ENSMMDG00005020080) #29	ENSMMDG00005020063	trmt2a (ENSMMDG00005019787) #30	ranbp1 (ENSMMDG00005019746)	zdhhc8b (ENSMMDG00005019741) #32	pgam5 (ENSMMDG00005019739)	ENSMMDG00005019737	ankle2 (ENSMMDG00005019731)	golga3 (ENSMMDG00005018024)	chfr (ENSMMDG00005017160)	FBRSL1 (ENSMMDG00005017124)
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Tiger tail seahorse	MODERN SPECIES	341	bmp10 (ENSHCOG00000005298)	arhgap25 (ENSHCOG00000005276)	cds2 (ENSHCOG00000005262)	zgc:65851 (ENSHCOG00000005156)	MXD1 (ENSHCOG00000004368)	snrnp27 (ENSHCOG00000004346)	add2 (ENSHCOG00000004337)	figla (ENSHCOG00000000115)	hk2 (ENSHCOG00000004285)	NPFFR1 (ENSHCOG00000004271)	tet3 (ENSHCOG00000004254)	ap3m2 (ENSHCOG00000004217)	kat6a (ENSHCOG00000004200)	ENSHCOG00000004169	sema4c (ENSHCOG00000004142)	tbx1 (ENSHCOG00000004020) #22	gnb1l (ENSHCOG00000004002) #23	ENSHCOG00000003979 #25	TXNRD2 (ENSHCOG00000003919) #25	arvcfb (ENSHCOG00000003773) #27	tango2 (ENSHCOG00000003325) #28	dgcr8 (ENSHCOG00000003315) #29	trmt2a (ENSHCOG00000003282) #30	ENSHCOG00000003260	ranbp1 (ENSHCOG00000003250)	zdhhc8b (ENSHCOG00000003233) #32	pgam5 (ENSHCOG00000003196)	ankle2 (ENSHCOG00000003182)	golga3 (ENSHCOG00000003156)	chfr (ENSHCOG00000003101)	ENSHCOG00000003084
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b
Fugu	MODERN SPECIES	13	bmp10 (ENSTRUG00000020938)	arhgap25 (ENSTRUG00000014999)	cds2 (ENSTRUG00000014941)	zgc:65851 (ENSTRUG00000014904)	MXD1 (ENSTRUG00000027715)	snrnp27 (ENSTRUG00000014833)	add2 (ENSTRUG00000014733)	figla (ENSTRUG00000014725)	hk2 (ENSTRUG00000014540)	NPFFR1 (ENSTRUG00000014473)	tet3 (ENSTRUG00000020359)	ap3m2 (ENSTRUG00000014366)	kat6a (ENSTRUG00000014143)	ENSTRUG00000025762	sema4c (ENSTRUG00000014047)	tbx1 (ENSTRUG00000014017) #22	gnb1l (ENSTRUG00000013988) #23	TXNRD2 (ENSTRUG00000013903) #25	arvcfb (ENSTRUG00000013715) #27	tango2 (ENSTRUG00000013653) #28	dgcr8 (ENSTRUG00000013594) #29	trmt2a (ENSTRUG00000013546) #30	ranbp1 (ENSTRUG00000013504)	zdhhc8 (ENSTRUG00000013397) #32	pgam5 (ENSTRUG00000013340)	ankle2 (ENSTRUG00000013275)	golga3 (ENSTRUG00000013241)	chfr (ENSTRUG00000013079)	FBRSL1 (ENSTRUG00000012985)	GALNT9 (ENSTRUG00000012871)	atad1a (ENSTRUG00000012810)
Tetraodon	MODERN SPECIES	3	ERLIN2 (ENSTNIG00000011431)	ENSTNIG00000011430	bmp10 (ENSTNIG00000011429)	arhgap25 (ENSTNIG00000011428)	cds2 (ENSTNIG00000011427)	MXD1 (ENSTNIG00000000414)	snrnp27 (ENSTNIG00000016775)	add2 (ENSTNIG00000016774)	figla (ENSTNIG00000016773)	hk2 (ENSTNIG00000016772)	NPFFR1 (ENSTNIG00000016771)	tet3 (ENSTNIG00000016770)	ap3m2 (ENSTNIG00000001177)	kat6a (ENSTNIG00000016769)	sema4c (ENSTNIG00000016768)	tbx1 (ENSTNIG00000016767) #22	gnb1l (ENSTNIG00000016766) #23	TXNRD2 (ENSTNIG00000016765) #25	arvcfb (ENSTNIG00000016764) #27	tango2 (ENSTNIG00000016763) #28	dgcr8 (ENSTNIG00000016762) #29	trmt2a (ENSTNIG00000016761) #30	ranbp1 (ENSTNIG00000016760)	zdhhc8b (ENSTNIG00000016759) #32	pgam5 (ENSTNIG00000016758)	ankle2 (ENSTNIG00000016757)	ENSTNIG00000016756	ENSTNIG00000016755	chfr (ENSTNIG00000016754)	ENSTNIG00000016753	GALNT9 (ENSTNIG00000016752)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Ballan wrasse	MODERN SPECIES	366																tbx1 (ENSLBEG00000010837) #22	gnb1l (ENSLBEG00000010857) #23	ENSLBEG00000010935 #25
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306
Perciformes	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709
Lumpfish	MODERN SPECIES	24	bmp10 (ENSCLMG00005017918)	arhgap25 (ENSCLMG00005017919)	cds2 (ENSCLMG00005017925)	zgc:65851 (ENSCLMG00005018327)	ENSCLMG00005018409	snrnp27 (ENSCLMG00005018410)	add2 (ENSCLMG00005018416)	figla (ENSCLMG00005018482)	hk2 (ENSCLMG00005018529)	ENSCLMG00005020830	tet3 (ENSCLMG00005020831)	ap3m2 (ENSCLMG00005020834)	kat6a (ENSCLMG00005020842)	ENSCLMG00005020846	sema4c (ENSCLMG00005020848)	tbx1 (ENSCLMG00005020851) #22	gnb1l (ENSCLMG00005020854) #23	TXNRD2 (ENSCLMG00005020866) #25	arvcfb (ENSCLMG00005004255) #27	tango2 (ENSCLMG00005004831) #28	dgcr8 (ENSCLMG00005004858) #29	trmt2a (ENSCLMG00005005979) #30	ENSCLMG00005005990	ranbp1 (ENSCLMG00005005992)	zdhhc8b (ENSCLMG00005005994) #32	piwil2 (ENSCLMG00005005997)	ENSCLMG00005005999	atad1a (ENSCLMG00005006001)	GALNT9 (ENSCLMG00005006002)	FBRSL1 (ENSCLMG00005006003)	chfr (ENSCLMG00005006044)
Stickleback	MODERN SPECIES	12	arhgap25 (ENSGACG00000013273)	cds2 (ENSGACG00000013234)	zgc:65851 (ENSGACG00000013231)	MXD1 (ENSGACG00000013215)	snrnp27 (ENSGACG00000013195)	add2 (ENSGACG00000013189)	figla (ENSGACG00000013186)	hk2 (ENSGACG00000013109)	NPFFR1 (ENSGACG00000013106)	tet3 (ENSGACG00000013100)	ap3m2 (ENSGACG00000013088)	kat6a (ENSGACG00000013076)	ENSGACG00000013075	sema4c (ENSGACG00000013062)	ENSGACG00000013061	tbx1 (ENSGACG00000013057) #22	gnb1l (ENSGACG00000013043) #23	TXNRD2 (ENSGACG00000013011) #25	arvcfb (ENSGACG00000013003) #27	tango2 (ENSGACG00000012977) #28	dgcr8 (ENSGACG00000012975) #29	trmt2a (ENSGACG00000012965) #30	ranbp1 (ENSGACG00000012952)	zdhhc8b (ENSGACG00000012949) #32	pgam5 (ENSGACG00000012945)	ankle2 (ENSGACG00000012934)	golga3 (ENSGACG00000012921)	ENSGACG00000012918	ENSGACG00000012916	chfr (ENSGACG00000012903)	FBRSL1 (ENSGACG00000012894)
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000178856	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Channel bull blenny	MODERN SPECIES	23	ERLIN2 (ENSCGOG00000018995)	ENSCGOG00000019985	bmp10 (ENSCGOG00000019986)	arhgap25 (ENSCGOG00000020011)	cds2 (ENSCGOG00000020025)	figla (ENSCGOG00000020299)	hk2 (ENSCGOG00000020474)	NPFFR1 (ENSCGOG00000022958)	tet3 (ENSCGOG00000022963)	slc27a2a (ENSCGOG00000022965)	ap3m2 (ENSCGOG00000022971)	kat6a (ENSCGOG00000023064)	ENSCGOG00000023094	sema4c (ENSCGOG00000023102)	ENSCGOG00000023114	tbx1 (ENSCGOG00000000467) #22	gnb1l (ENSCGOG00000000504) #23	TXNRD2 (ENSCGOG00000000651) #25	arvcfb (ENSCGOG00000000941) #27	tango2 (ENSCGOG00000000981) #28	dgcr8 (ENSCGOG00000000994) #29	trmt2a (ENSCGOG00000001053) #30	ENSCGOG00000001166	ranbp1 (ENSCGOG00000001168)	zdhhc8b (ENSCGOG00000001170) #32	pgam5 (ENSCGOG00000001193)	ankle2 (ENSCGOG00000001198)	golga3 (ENSCGOG00000001330)	chfr (ENSCGOG00000001922)	FBRSL1 (ENSCGOG00000002237)	GALNT9 (ENSCGOG00000002291)
Pike perch	MODERN SPECIES	16	ENSSLUG00000018640	cds2 (ENSSLUG00000018129)	zgc:65851 (ENSSLUG00000018093)	ENSSLUG00000018088	snrnp27 (ENSSLUG00000018084)	add2 (ENSSLUG00000017985)	figla (ENSSLUG00000017949)	hk2 (ENSSLUG00000017408)	NPFFR1 (ENSSLUG00000017335)	ENSSLUG00000017333	tet3 (ENSSLUG00000017316)	ap3m2 (ENSSLUG00000017303)	kat6a (ENSSLUG00000017243)	ENSSLUG00000017207	sema4c (ENSSLUG00000017202)	tbx1 (ENSSLUG00000017169) #22	gnb1l (ENSSLUG00000017165) #23	TXNRD2 (ENSSLUG00000013348) #25	arvcfb (ENSSLUG00000012199) #27	tango2 (ENSSLUG00000012107) #28	dgcr8 (ENSSLUG00000012045) #29	ENSSLUG00000012031	trmt2a (ENSSLUG00000011813) #30	ranbp1 (ENSSLUG00000011763)	zdhhc8b (ENSSLUG00000011743) #32	pgam5 (ENSSLUG00000011737)	ankle2 (ENSSLUG00000011706)	golga3 (ENSSLUG00000010026)	chfr (ENSSLUG00000009933)	FBRSL1 (ENSSLUG00000009784)	GALNT9 (ENSSLUG00000009755)
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Gilthead seabream	MODERN SPECIES	19	cds2 (ENSSAUG00010022057)	zgc:65851 (ENSSAUG00010022068)	MXD1 (ENSSAUG00010022086)	snrnp27 (ENSSAUG00010022088)	DNAH2 (ENSSAUG00010022092)	add2 (ENSSAUG00010022105)	figla (ENSSAUG00010022186)	ENSSAUG00010022187	hk2 (ENSSAUG00010022222)	NPFFR1 (ENSSAUG00010024389)	tet3 (ENSSAUG00010024407)	ap3m2 (ENSSAUG00010024412)	kat6a (ENSSAUG00010024422)	ENSSAUG00010024604	sema4c (ENSSAUG00010024607)	tbx1 (ENSSAUG00010024608) #22	gnb1l (ENSSAUG00010024609) #23	TXNRD2 (ENSSAUG00010024660) #25	arvcfb (ENSSAUG00010025641) #27	tango2 (ENSSAUG00010025647) #28	dgcr8 (ENSSAUG00010025648) #29	trmt2a (ENSSAUG00010025657) #30	ranbp1 (ENSSAUG00010025680)	zdhhc8b (ENSSAUG00010000212) #32	pgam5 (ENSSAUG00010000236)	ankle2 (ENSSAUG00010000248)	golga3 (ENSSAUG00010000292)	chfr (ENSSAUG00010000327)	FBRSL1 (ENSSAUG00010000420)	GALNT9 (ENSSAUG00010000731)	atad1a (ENSSAUG00010000761)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
European seabass	MODERN SPECIES	13	ENSDLAG00005028068	bmp10 (ENSDLAG00005030781)	ENSDLAG00005006474	cds2 (ENSDLAG00005009665)	zgc:65851 (ENSDLAG00005006470)	add2 (ENSDLAG00005006286)	figla (ENSDLAG00005006251)	hk2 (ENSDLAG00005005866)	ENSDLAG00005005806	tet3 (ENSDLAG00005005747)	ap3m2 (ENSDLAG00005005711)	kat6a (ENSDLAG00005005194)	ENSDLAG00005005152	sema4c (ENSDLAG00005004938)	ENSDLAG00005027622	tbx1 (ENSDLAG00005004858) #22	gnb1l (ENSDLAG00005004852) #23	TXNRD2 (ENSDLAG00005022229) #25	ARVCF (ENSDLAG00005022042) #27	TANGO2 (ENSDLAG00005022032) #28	DGCR8 (ENSDLAG00005021935) #29	TRMT2A (ENSDLAG00005021563) #30	ENSDLAG00005034691	ENSDLAG00005021488 #32	pgam5 (ENSDLAG00005030822)	ANKLE2 (ENSDLAG00005021392)	golga3 (ENSDLAG00005020305)	chfr (ENSDLAG00005020052)	ENSDLAG00005019385	ENSDLAG00005019371	ENSDLAG00005019345
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005019101	TOP3B (ENSLCRG00005019001)	UNC5D (ENSLCRG00005018508)	hdr (ENSLCRG00005018500)	cyb561a3a (ENSLCRG00005018497)	loxl2b (ENSLCRG00005017475)	ENSLCRG00005017466	GOLGA7 (ENSLCRG00005017465)	sfrp1a (ENSLCRG00005017464)	ENSLCRG00005017463	tet3 (ENSLCRG00005017462)	ap3m2 (ENSLCRG00005017460)	kat6a (ENSLCRG00005017423)	ENSLCRG00005017416	sema4c (ENSLCRG00005017406)	tbx1 (ENSLCRG00005017402) #22	gnb1l (ENSLCRG00005017398) #23	TXNRD2 (ENSLCRG00005016744) #25	arvcfb (ENSLCRG00005016719) #27	tango2 (ENSLCRG00005016714) #28	dgcr8 (ENSLCRG00005016704) #29	trmt2a (ENSLCRG00005016296) #30	ranbp1 (ENSLCRG00005016280)	zdhhc8b (ENSLCRG00005016247) #32	ENSLCRG00005016244	pgam5 (ENSLCRG00005016242)	ankle2 (ENSLCRG00005016149)	ENSLCRG00005014894	chfr (ENSLCRG00005014864)	ENSLCRG00005014863	FBRSL1 (ENSLCRG00005014685)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Tongue sole	MODERN SPECIES	398	ENSCSEG00000012048	f2r (ENSCSEG00000012046)	iqgap2 (ENSCSEG00000011933)	sv2ca (ENSCSEG00000011905)	ENSCSEG00000011897	ANKDD1B (ENSCSEG00000011882)	POLK (ENSCSEG00000011846)	ENSCSEG00000011839	cert1a (ENSCSEG00000011782)	pip5k1bb (ENSCSEG00000011758)	ENSCSEG00000011752	ENSCSEG00000011745	ENSCSEG00000011733	ENSCSEG00000011724	sema4c (ENSCSEG00000011709)	tbx1 (ENSCSEG00000011695) #22	gnb1l (ENSCSEG00000011681) #23	arvcfb (ENSCSEG00000011663) #27	TXNRD2 (ENSCSEG00000011607) #25	tango2 (ENSCSEG00000011655) #28	ranbp1 (ENSCSEG00000011592)	ENSCSEG00000011587	trmt2a (ENSCSEG00000011557) #30	dgcr8 (ENSCSEG00000011546) #29	zdhhc8b (ENSCSEG00000011480) #32	pgam5 (ENSCSEG00000011471)	ankle2 (ENSCSEG00000011458)	ENSCSEG00000011453	golga3 (ENSCSEG00000011402)	ENSCSEG00000011384	ENSCSEG00000011380
Turbot	MODERN SPECIES	21	ENSSMAG00000020120	bmp10 (ENSSMAG00000020110)	ENSSMAG00000020091	cds2 (ENSSMAG00000020076)	zgc:65851 (ENSSMAG00000020070)	ENSSMAG00000020061	snrnp27 (ENSSMAG00000020051)	add2 (ENSSMAG00000020030)	figla (ENSSMAG00000020025)	hk2 (ENSSMAG00000020019)	ENSSMAG00000020014	tet3 (ENSSMAG00000020007)	ap3m2 (ENSSMAG00000019997)	ENSSMAG00000019962	sema4c (ENSSMAG00000019947)	tbx1 (ENSSMAG00000019942) #22	gnb1l (ENSSMAG00000019937) #23	TXNRD2 (ENSSMAG00000019894) #25	ARVCF (ENSSMAG00000019752) #27	TANGO2 (ENSSMAG00000019725) #28	DGCR8 (ENSSMAG00000019677) #29	ENSSMAG00000019674	TRMT2A (ENSSMAG00000019650) #30	ENSSMAG00000019631	ENSSMAG00000019599 #32	ENSSMAG00000019597	pgam5 (ENSSMAG00000019576)	ANKLE2 (ENSSMAG00000019562)	golga3 (ENSSMAG00000019507)	ENSSMAG00000025006	chfr (ENSSMAG00000019467)
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Barramundi perch	MODERN SPECIES	95	zgc:65851 (ENSLCAG00010016356)	MXD1 (ENSLCAG00010016360)	snrnp27 (ENSLCAG00010016371)	add2 (ENSLCAG00010016404)	figla (ENSLCAG00010016455)	hk2 (ENSLCAG00010016823)	ENSLCAG00010018231	ENSLCAG00010018236	tet3 (ENSLCAG00010018240)	ENSLCAG00010018244	ENSLCAG00010018247	ap3m2 (ENSLCAG00010018251)	kat6a (ENSLCAG00010018266)	ENSLCAG00010018288	sema4c (ENSLCAG00010018293)	tbx1 (ENSLCAG00010018303) #22	gnb1l (ENSLCAG00010018315) #23	TXNRD2 (ENSLCAG00010018356) #25	arvcfb (ENSLCAG00010018513) #27	tango2 (ENSLCAG00010018562) #28	dgcr8 (ENSLCAG00010018584) #29	trmt2a (ENSLCAG00010018644) #30	ENSLCAG00010018691	ranbp1 (ENSLCAG00010018694)	zdhhc8b (ENSLCAG00010018707) #32	pgam5 (ENSLCAG00010018726)	ankle2 (ENSLCAG00010018736)	golga3 (ENSLCAG00010018801)	chfr (ENSLCAG00010018967)	FBRSL1 (ENSLCAG00010018977)	GALNT9 (ENSLCAG00010019002)
Seriola	ANCESTRAL SPECIES	7	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599
Greater amberjack	MODERN SPECIES	6	cds2 (ENSSDUG00000003275)	zgc:65851 (ENSSDUG00000003252)	MXD1 (ENSSDUG00000003240)	snrnp27 (ENSSDUG00000003229)	add2 (ENSSDUG00000003212)	figla (ENSSDUG00000003146)	hk2 (ENSSDUG00000003114)	NPFFR1 (ENSSDUG00000003101)	tet3 (ENSSDUG00000003017)	ENSSDUG00000002991	ap3m2 (ENSSDUG00000002955)	kat6a (ENSSDUG00000002931)	ENSSDUG00000002906	sema4c (ENSSDUG00000002884)	ENSSDUG00000002870	tbx1 (ENSSDUG00000002853) #22	gnb1l (ENSSDUG00000002833) #23	TXNRD2 (ENSSDUG00000002755) #25	arvcfb (ENSSDUG00000002610) #27	tango2 (ENSSDUG00000002545) #28	dgcr8 (ENSSDUG00000002478) #29	trmt2a (ENSSDUG00000002436) #30	ENSSDUG00000002427	ranbp1 (ENSSDUG00000002380)	zdhhc8b (ENSSDUG00000002363) #32	pgam5 (ENSSDUG00000002342)	ankle2 (ENSSDUG00000002333)	golga3 (ENSSDUG00000002272)	chfr (ENSSDUG00000002210)	FBRSL1 (ENSSDUG00000002083)	GALNT9 (ENSSDUG00000002014)
Yellowtail amberjack	MODERN SPECIES	3287	arhgap25 (ENSSLDG00000014727)	cds2 (ENSSLDG00000014746)	zgc:65851 (ENSSLDG00000014769)	MXD1 (ENSSLDG00000014776)	snrnp27 (ENSSLDG00000014795)	add2 (ENSSLDG00000014818)	figla (ENSSLDG00000014859)	hk2 (ENSSLDG00000014876)	NPFFR1 (ENSSLDG00000014898)	tet3 (ENSSLDG00000014918)	ENSSLDG00000014940	ap3m2 (ENSSLDG00000014958)	kat6a (ENSSLDG00000014992)	ENSSLDG00000015026	sema4c (ENSSLDG00000015061)	tbx1 (ENSSLDG00000015134) #22	gnb1l (ENSSLDG00000015148) #23	TXNRD2 (ENSSLDG00000015221) #25	arvcfb (ENSSLDG00000015526) #27	tango2 (ENSSLDG00000015740) #28	dgcr8 (ENSSLDG00000015762) #29	trmt2a (ENSSLDG00000015826) #30	ENSSLDG00000015853	ranbp1 (ENSSLDG00000015871)	zdhhc8b (ENSSLDG00000015939) #32	pgam5 (ENSSLDG00000015980)	ankle2 (ENSSLDG00000016012)	golga3 (ENSSLDG00000016056)	chfr (ENSSLDG00000016110)	FBRSL1 (ENSSLDG00000016149)
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Zig-zag eel	MODERN SPECIES	23	cds2 (ENSMAMG00000020602)	zgc:65851 (ENSMAMG00000020614)	ENSMAMG00000020618	snrnp27 (ENSMAMG00000020624)	add2 (ENSMAMG00000020629)	figla (ENSMAMG00000020638)	hk2 (ENSMAMG00000020698)	ENSMAMG00000020717	ENSMAMG00000020724	ap3m2 (ENSMAMG00000020732)	kat6a (ENSMAMG00000020746)	ENSMAMG00000020751	sema4c (ENSMAMG00000020765)	ENSMAMG00000024484	ENSMAMG00000004090	tbx1 (ENSMAMG00000020778) #22	gnb1l (ENSMAMG00000026626) #23	TXNRD2 (ENSMAMG00000020807) #25	ARVCF (ENSMAMG00000020827) #27	TANGO2 (ENSMAMG00000020841) #28	DGCR8 (ENSMAMG00000020856) #29	TRMT2A (ENSMAMG00000020881) #30	ENSMAMG00000020892	ENSMAMG00000025825	ENSMAMG00000020901 #32	pgam5 (ENSMAMG00000020904)	ANKLE2 (ENSMAMG00000020909)	golga3 (ENSMAMG00000020913)	chfr (ENSMAMG00000020932)	ENSMAMG00000020939	ENSMAMG00000000314
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000178856	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Siamese fighting fish	MODERN SPECIES	20	arhgap25 (ENSBSLG00000009911)	cds2 (ENSBSLG00000009967)	zgc:65851 (ENSBSLG00000010227)	MXD1 (ENSBSLG00000010233)	snrnp27 (ENSBSLG00000010236)	add2 (ENSBSLG00000010766)	figla (ENSBSLG00000011286)	hk2 (ENSBSLG00000011402)	NPFFR1 (ENSBSLG00000015160)	ENSBSLG00000015197	tet3 (ENSBSLG00000015219)	ap3m2 (ENSBSLG00000015319)	kat6a (ENSBSLG00000015408)	ENSBSLG00000016598	sema4c (ENSBSLG00000016693)	tbx1 (ENSBSLG00000016878) #22	gnb1l (ENSBSLG00000016989) #23	TXNRD2 (ENSBSLG00000017108) #25	arvcfb (ENSBSLG00000018278) #27	tango2 (ENSBSLG00000019175) #28	dgcr8 (ENSBSLG00000019227) #29	trmt2a (ENSBSLG00000019325) #30	ENSBSLG00000019609	ranbp1 (ENSBSLG00000019767)	zdhhc8b (ENSBSLG00000019816) #32	pgam5 (ENSBSLG00000019871)	ENSBSLG00000019893	ankle2 (ENSBSLG00000019915)	golga3 (ENSBSLG00000020002)	chfr (ENSBSLG00000020549)	FBRSL1 (ENSBSLG00000020569)
Climbing perch	MODERN SPECIES	22	ENSATEG00000014647	cds2 (ENSATEG00000014657)	zgc:65851 (ENSATEG00000014687)	ENSATEG00000028566	snrnp27 (ENSATEG00000014733)	add2 (ENSATEG00000014740)	figla (ENSATEG00000014775)	hk2 (ENSATEG00000014796)	ENSATEG00000014836	tet3 (ENSATEG00000014855)	ENSATEG00000014883	ap3m2 (ENSATEG00000014899)	kat6a (ENSATEG00000014921)	ENSATEG00000015008	sema4c (ENSATEG00000015035)	tbx1 (ENSATEG00000015097) #22	gnb1l (ENSATEG00000028028) #23	TXNRD2 (ENSATEG00000015134) #25	ARVCF (ENSATEG00000015225) #27	TANGO2 (ENSATEG00000015387) #28	ENSATEG00000015421	DGCR8 (ENSATEG00000015435) #29	TRMT2A (ENSATEG00000015492) #30	ENSATEG00000026138	ENSATEG00000015567	ENSATEG00000015610 #32	ENSATEG00000015812	pgam5 (ENSATEG00000015826)	ANKLE2 (ENSATEG00000015849)	golga3 (ENSATEG00000015900)	chfr (ENSATEG00000015922)
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.e.a
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f
Amphiprion	ANCESTRAL SPECIES	18	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f
Clown anemonefish	MODERN SPECIES	1000																tbx1 (ENSAOCG00000009064) #22	gnb1l (ENSAOCG00000000557) #23	TXNRD2 (ENSAOCG00000009134) #25	arvcfb (ENSAOCG00000009333) #27	tango2 (ENSAOCG00000009385) #28	dgcr8 (ENSAOCG00000009444) #29	trmt2a (ENSAOCG00000009497) #30	ranbp1 (ENSAOCG00000009542)	zdhhc8b (ENSAOCG00000009558) #32	pgam5 (ENSAOCG00000002007)	ankle2 (ENSAOCG00000009612)	golga3 (ENSAOCG00000009722)	chfr (ENSAOCG00000009754)	ENSAOCG00000009797	GALNT9 (ENSAOCG00000009830)	atad1a (ENSAOCG00000009872)
Orange clownfish	MODERN SPECIES	19	bmp10 (ENSAPEG00000002643)	arhgap25 (ENSAPEG00000002676)	cds2 (ENSAPEG00000002692)	zgc:65851 (ENSAPEG00000002722)	MXD1 (ENSAPEG00000002731)	snrnp27 (ENSAPEG00000002742)	add2 (ENSAPEG00000002806)	figla (ENSAPEG00000002822)	hk2 (ENSAPEG00000003103)	ENSAPEG00000004052	tet3 (ENSAPEG00000004084)	ap3m2 (ENSAPEG00000004128)	kat6a (ENSAPEG00000004193)	ENSAPEG00000004300	sema4c (ENSAPEG00000004359)	tbx1 (ENSAPEG00000004378) #22	gnb1l (ENSAPEG00000004526) #23	TXNRD2 (ENSAPEG00000004544) #25	arvcfb (ENSAPEG00000004767) #27	tango2 (ENSAPEG00000004865) #28	dgcr8 (ENSAPEG00000004916) #29	trmt2a (ENSAPEG00000005005) #30	ENSAPEG00000005058	ranbp1 (ENSAPEG00000005067)	zdhhc8b (ENSAPEG00000005113) #32	pgam5 (ENSAPEG00000005122)	ankle2 (ENSAPEG00000005145)	golga3 (ENSAPEG00000005160)	chfr (ENSAPEG00000005284)	FBRSL1 (ENSAPEG00000005314)	GALNT9 (ENSAPEG00000005360)
Spiny chromis	MODERN SPECIES	80															ENSAPOG00000016324	tbx1 (ENSAPOG00000016283) #22	gnb1l (ENSAPOG00000016251) #23	TXNRD2 (ENSAPOG00000016233) #25	arvcfb (ENSAPOG00000016165) #27	tango2 (ENSAPOG00000016054) #28	dgcr8 (ENSAPOG00000016017) #29	ENSAPOG00000016003	LYPD1 (ENSAPOG00000015983)	ENSAPOG00000015980	gpr39 (ENSAPOG00000015964)	SLC35F5 (ENSAPOG00000001049)	SYMPK (ENSAPOG00000015934)	zgc:136439 (ENSAPOG00000015825)	asnsd1 (ENSAPOG00000015780)	ENSAPOG00000015761	slc40a1 (ENSAPOG00000000983)
Bicolor damselfish	MODERN SPECIES	262						figla (ENSSPAG00000010206)	ENSSPAG00000010197	hk2 (ENSSPAG00000010175)	ENSSPAG00000010164	tet3 (ENSSPAG00000010151)	ap3m2 (ENSSPAG00000010119)	kat6a (ENSSPAG00000010055)	ENSSPAG00000010016	ENSSPAG00000010004	sema4c (ENSSPAG00000009967)	tbx1 (ENSSPAG00000009939) #22	gnb1l (ENSSPAG00000009914) #23	TXNRD2 (ENSSPAG00000009857) #25	arvcfb (ENSSPAG00000009777) #27	ENSSPAG00000009760 #27	tango2 (ENSSPAG00000009731) #28	dgcr8 (ENSSPAG00000009666) #29	ENSSPAG00000009658	trmt2a (ENSSPAG00000009633) #30	ranbp1 (ENSSPAG00000009597)	zdhhc8b (ENSSPAG00000009574) #32	pgam5 (ENSSPAG00000009558)	ankle2 (ENSSPAG00000009543)	golga3 (ENSSPAG00000009477)	chfr (ENSSPAG00000009447)
Cichlidae	ANCESTRAL SPECIES	29	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Pseudocrenilabrinae	ANCESTRAL SPECIES	26	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a.p	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	28	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a.p	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000174952	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Haplochromini	ANCESTRAL SPECIES	30	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Haplochromini_A	ANCESTRAL SPECIES	32	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
P. nyererei	MODERN SPECIES	498										ENSPNYG00000014034	tet3 (ENSPNYG00000013997)	ap3m2 (ENSPNYG00000013968)	kat6a (ENSPNYG00000013903)	ENSPNYG00000013868	sema4c (ENSPNYG00000013816)	tbx1 (ENSPNYG00000013789) #22	gnb1l (ENSPNYG00000013775) #23	TXNRD2 (ENSPNYG00000013735) #25	arvcfb (ENSPNYG00000013290) #27	tango2 (ENSPNYG00000013153) #28
Haplochromini_B	ANCESTRAL SPECIES	44	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00940000155794.h.g.b.a.a.a.b	ENSGT00940000159252.b.a	ENSGT00940000158555.a.a	ENSGT00390000016504	ENSGT00990000203785	ENSGT00390000007349.b	ENSGT00940000165280.a.a	ENSGT00940000164508	ENSGT00940000154885.A.e.b	ENSGT00940000154885.B	ENSGT00940000155307.a.a
Zebra mbuna	MODERN SPECIES	1094	bmp10 (ENSMZEG00005001718)	arhgap25 (ENSMZEG00005001711)	cds2 (ENSMZEG00005001656)	zgc:65851 (ENSMZEG00005001648)	MXD1 (ENSMZEG00005001624)	snrnp27 (ENSMZEG00005001618)	add2 (ENSMZEG00005001590)	figla (ENSMZEG00005001561)	hk2 (ENSMZEG00005001539)	NPFFR1 (ENSMZEG00005001294)	tet3 (ENSMZEG00005001257)	ap3m2 (ENSMZEG00005001226)	kat6a (ENSMZEG00005001157)	ENSMZEG00005001142	sema4c (ENSMZEG00005001105)	tbx1 (ENSMZEG00005001071) #22	gnb1l (ENSMZEG00005001037) #23	TXNRD2 (ENSMZEG00005001021) #25	arvcfb (ENSMZEG00005000889) #27	ggt5a (ENSMZEG00005000826)	ENSMZEG00005000809	tango2 (ENSMZEG00005000784) #28	KLHL10 (ENSMZEG00005000777)	lhb (ENSMZEG00005000770)	ggt5a (ENSMZEG00005000655)	asphd2 (ENSMZEG00005000624)	cabp1a (ENSMZEG00005000581)	mlec (ENSMZEG00005000567)	ENSMZEG00005000552	hps4 (ENSMZEG00005000544)	cox6a1 (ENSMZEG00005000519)
Eastern happy	MODERN SPECIES	3	add2 (ENSACLG00000002869)	figla (ENSACLG00000002890)	hk2 (ENSACLG00000002920)	NPFFR1 (ENSACLG00000003160)	ENSACLG00000003249	tet3 (ENSACLG00000003273)	ap3m2 (ENSACLG00000003300)	kat6a (ENSACLG00000003938)	ENSACLG00000003998	sema4c (ENSACLG00000004017)	ENSACLG00000004053	ENSACLG00000004062	ENSACLG00000004070	ENSACLG00000004073	ENSACLG00000004082	tbx1 (ENSACLG00000004096) #22	gnb1l (ENSACLG00000004121) #23	TXNRD2 (ENSACLG00000004146) #25	arvcfb (ENSACLG00000004219) #27	tango2 (ENSACLG00000004403) #28	ENSACLG00000004425	ENSACLG00000004430	UNC5D (ENSACLG00000004465)	hdr (ENSACLG00000004595)	cyb561a3a (ENSACLG00000004625)	loxl2b (ENSACLG00000004817)	GOLGA7 (ENSACLG00000004827)	sfrp1a (ENSACLG00000004845)	ZMAT4 (ENSACLG00000005038)	tcima (ENSACLG00000005067)	adam28 (ENSACLG00000005291)
Burton s mouthbrooder	MODERN SPECIES	482											tet3 (ENSHBUG00000007486)	ap3m2 (ENSHBUG00000007540)	kat6a (ENSHBUG00000007593)	ENSHBUG00000007600	sema4c (ENSHBUG00000007613)	tbx1 (ENSHBUG00000007639) #22	gnb1l (ENSHBUG00000007651) #23	TXNRD2 (ENSHBUG00000007777) #25	arvcfb (ENSHBUG00000007839) #27	tango2 (ENSHBUG00000007916) #28
Lyretail cichlid	MODERN SPECIES	533																tbx1 (ENSNBRG00000012281) #22	gnb1l (ENSNBRG00000012318) #23	TXNRD2 (ENSNBRG00000012402) #25	arvcfb (ENSNBRG00000012753) #27	tango2 (ENSNBRG00000013556) #28
Nile tilapia	MODERN SPECIES	3	add2 (ENSONIG00000015858)	figla (ENSONIG00000015856)	ENSONIG00000039993	ENSONIG00000002149	hk2 (ENSONIG00000015846)	NPFFR1 (ENSONIG00000015845)	ENSONIG00000042081	tet3 (ENSONIG00000015843)	ENSONIG00000038202	ap3m2 (ENSONIG00000015840)	kat6a (ENSONIG00000015837)	ENSONIG00000015835	sema4c (ENSONIG00000015832)	ENSONIG00000030801	ENSONIG00000033082	tbx1 (ENSONIG00000039158) #22	gnb1l (ENSONIG00000028885) #23	TXNRD2 (ENSONIG00000015820) #25	arvcfb (ENSONIG00000015812) #27	ENSONIG00000031171	ENSONIG00000037751	ENSONIG00000029391	tango2 (ENSONIG00000015809) #28	ENSONIG00000040269	ENSONIG00000034944	ENSONIG00000029999	ggt5a (ENSONIG00000033718)	ENSONIG00000029671	asphd2 (ENSONIG00000011220)	cabp1a (ENSONIG00000034969)	ENSONIG00000030083
Midas cichlid	MODERN SPECIES	438											tet3 (ENSACIG00000009921)	ap3m2 (ENSACIG00000009903)	kat6a (ENSACIG00000009860)	ENSACIG00000009836	sema4c (ENSACIG00000009763)	tbx1 (ENSACIG00000009738) #22	gnb1l (ENSACIG00000009690) #23	TXNRD2 (ENSACIG00000009370) #25	arvcfb (ENSACIG00000009303) #27	plod3 (ENSACIG00000009256)	cyb5d1 (ENSACIG00000009225)	ENSACIG00000009211	ENSACIG00000009201
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT01020000230579.C.b.b.a.a.a	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00980000199539	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Chinese medaka	MODERN SPECIES	441																tbx1 (ENSOSIG00000006669) #22	gnb1l (ENSOSIG00000006672) #23	TXNRD2 (ENSOSIG00000006674) #25	arvcfb (ENSOSIG00000006779) #27	ENSOSIG00000006816	ENSOSIG00000006817	tango2 (ENSOSIG00000006818) #28	dgcr8 (ENSOSIG00000006823) #29	trmt2a (ENSOSIG00000006840) #30	ENSOSIG00000007088	ranbp1 (ENSOSIG00000007089)	zdhhc8b (ENSOSIG00000007137) #32	pgam5 (ENSOSIG00000007179)	ankle2 (ENSOSIG00000007182)	golga3 (ENSOSIG00000007210)	chfr (ENSOSIG00000008870)
Japanese Medaka HdrR	MODERN SPECIES	23	MXD1 (ENSORLG00000026050)	snrnp27 (ENSORLG00000015459)	add2 (ENSORLG00000030229)	figla (ENSORLG00000015451)	hk2 (ENSORLG00000015439)	ENSORLG00000022826	ENSORLG00000023844	ENSORLG00000015368	ENSORLG00000027729	tet3 (ENSORLG00000027616)	ap3m2 (ENSORLG00000015340)	kat6a (ENSORLG00000015313)	ENSORLG00000026010	sema4c (ENSORLG00000015302)	ENSORLG00000023431	tbx1 (ENSORLG00000015256) #22	gnb1l (ENSORLG00000015242) #23	TXNRD2 (ENSORLG00000015222) #25	ENSORLG00000026992	arvcfb (ENSORLG00000015210) #27	tango2 (ENSORLG00000015185) #28	dgcr8 (ENSORLG00000015160) #29	ENSORLG00000029201	trmt2a (ENSORLG00000015143) #30	ranbp1 (ENSORLG00000021996)	ENSORLG00000026272	zdhhc8b (ENSORLG00000015107) #32	ENSORLG00000025747	pgam5 (ENSORLG00000015061)	ankle2 (ENSORLG00000015038)	golga3 (ENSORLG00000015012)
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Javanese ricefish	MODERN SPECIES	23	bmp10 (ENSOJAG00000006304)	arhgap25 (ENSOJAG00000006268)	cds2 (ENSOJAG00000005951)	zgc:65851 (ENSOJAG00000005865)	MXD1 (ENSOJAG00000005848)	snrnp27 (ENSOJAG00000005816)	add2 (ENSOJAG00000024028)	figla (ENSOJAG00000024016)	hk2 (ENSOJAG00000023897)	NPFFR1 (ENSOJAG00000023852)	tet3 (ENSOJAG00000023848)	ap3m2 (ENSOJAG00000023844)	kat6a (ENSOJAG00000023842)	sema4c (ENSOJAG00000023835)	ENSOJAG00000023829	tbx1 (ENSOJAG00000023828) #22	gnb1l (ENSOJAG00000023826) #23	TXNRD2 (ENSOJAG00000023761) #25	arvcfb (ENSOJAG00000023724) #27	tango2 (ENSOJAG00000023716) #28	dgcr8 (ENSOJAG00000023713) #29	ENSOJAG00000023712	trmt2a (ENSOJAG00000023704) #30	ranbp1 (ENSOJAG00000023696)	zdhhc8b (ENSOJAG00000023689) #32	pgam5 (ENSOJAG00000023684)	ankle2 (ENSOJAG00000023682)	golga3 (ENSOJAG00000023647)	chfr (ENSOJAG00000023626)	ENSOJAG00000023616	ENSOJAG00000023596
Indian medaka	MODERN SPECIES	11	snrnp27 (ENSOMEG00000020477)	add2 (ENSOMEG00000020441)	figla (ENSOMEG00000020352)	ENSOMEG00000020314	ENSOMEG00000020305	hk2 (ENSOMEG00000020282)	NPFFR1 (ENSOMEG00000020203)	ENSOMEG00000020185	kcnk5a (ENSOMEG00000020170)	tet3 (ENSOMEG00000020122)	ap3m2 (ENSOMEG00000020004)	kat6a (ENSOMEG00000019969)	ENSOMEG00000019955	sema4c (ENSOMEG00000019914)	ENSOMEG00000019830	tbx1 (ENSOMEG00000019809) #22	gnb1l (ENSOMEG00000019769) #23	TXNRD2 (ENSOMEG00000019734) #25	arvcfb (ENSOMEG00000019562) #27	ENSOMEG00000019271	tango2 (ENSOMEG00000019244) #28	dgcr8 (ENSOMEG00000019137) #29	trmt2a (ENSOMEG00000019101) #30	ENSOMEG00000019081	ranbp1 (ENSOMEG00000019068)	zdhhc8b (ENSOMEG00000019020) #32	pgam5 (ENSOMEG00000019004)	ankle2 (ENSOMEG00000018985)	golga3 (ENSOMEG00000018936)	chfr (ENSOMEG00000018886)	FBRSL1 (ENSOMEG00000018810)
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Aplocheiloidei	ANCESTRAL SPECIES	20	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Turquoise killifish	MODERN SPECIES	1627	ENSNFUG00015024221	ERLIN2 (ENSNFUG00015024226)	ADD2 (ENSNFUG00015024247)	figla (ENSNFUG00015024259)	ENSNFUG00015024267	ENSNFUG00015024271	tet3 (ENSNFUG00015024278)	AP3M2 (ENSNFUG00015024299)	kat6a (ENSNFUG00015024318)	ENSNFUG00015024445	CDCA2 (ENSNFUG00015024447)	sema4c (ENSNFUG00015024450)	ENSNFUG00015024452	ENSNFUG00015024454	ENSNFUG00015024456	tbx1 (ENSNFUG00015005263) #22	GNB1L (ENSNFUG00015005288) #23	TXNRD2 (ENSNFUG00015005393) #25	ARVCFB (ENSNFUG00015005792) #27	tango2 (ENSNFUG00015005924) #28	DGCR8 (ENSNFUG00015005964) #29	trmt2a (ENSNFUG00015006052) #30	ranbp1 (ENSNFUG00015006202)	ZDHHC8B (ENSNFUG00015006222) #32	ENSNFUG00015006252	PGAM5 (ENSNFUG00015006260)	ANKLE2 (ENSNFUG00015006277)	golga3 (ENSNFUG00015006369)	chfr (ENSNFUG00015007062)	FBRSL1 (ENSNFUG00015007151)	ENSNFUG00015007260
Mangrove rivulus	MODERN SPECIES	30	zgc:65851 (ENSKMAG00000008283)	cds2 (ENSKMAG00000008314)	arhgap25 (ENSKMAG00000008391)	bmp10 (ENSKMAG00000008412)	ENSKMAG00000008432	ERLIN2 (ENSKMAG00000008450)	add2 (ENSKMAG00000008526)	figla (ENSKMAG00000008566)	hk2 (ENSKMAG00000008651)	NPFFR1 (ENSKMAG00000008673)	tet3 (ENSKMAG00000008703)	ap3m2 (ENSKMAG00000008725)	kat6a (ENSKMAG00000008766)	ENSKMAG00000008828	sema4c (ENSKMAG00000008852)	tbx1 (ENSKMAG00000008886) #22	gnb1l (ENSKMAG00000008921) #23	TXNRD2 (ENSKMAG00000008940) #25	arvcfb (ENSKMAG00000009005) #27	tango2 (ENSKMAG00000009062) #28	dgcr8 (ENSKMAG00000009087) #29	trmt2a (ENSKMAG00000009161) #30	ENSKMAG00000009210	ranbp1 (ENSKMAG00000009217)	zdhhc8b (ENSKMAG00000009250) #32	ENSKMAG00000009272	pgam5 (ENSKMAG00000009287)	ankle2 (ENSKMAG00000009309)	golga3 (ENSKMAG00000009360)	chfr (ENSKMAG00000009479)	FBRSL1 (ENSKMAG00000009499)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C.p	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Platyfish	MODERN SPECIES	3	ENSXMAG00000010467	loxl2b (ENSXMAG00000010470)	cyb561a3a (ENSXMAG00000010489)	hdr (ENSXMAG00000010490)	ENSXMAG00000023255	UNC5D (ENSXMAG00000010494)	ENSXMAG00000028799	tm2d2 (ENSXMAG00000010513)	ENSXMAG00000021702	ENSXMAG00000021698	lman2lb (ENSXMAG00000024814)	ENSXMAG00000026852	kat6a (ENSXMAG00000010515)	ENSXMAG00000022670	sema4c (ENSXMAG00000002351)	tbx1 (ENSXMAG00000002370) #22	gnb1l (ENSXMAG00000002374) #23	TXNRD2 (ENSXMAG00000002378) #25	arvcfb (ENSXMAG00000002404) #27	tango2 (ENSXMAG00000002411) #28	dgcr8 (ENSXMAG00000002426) #29	ENSXMAG00000022575	trmt2a (ENSXMAG00000002434) #30	ranbp1 (ENSXMAG00000002443)	zdhhc8b (ENSXMAG00000002450) #32	pgam5 (ENSXMAG00000002459)	ankle2 (ENSXMAG00000002465)	golga3 (ENSXMAG00000002470)	chfr (ENSXMAG00000002473)	FBRSL1 (ENSXMAG00000022481)	ENSXMAG00000024472
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.E.d.e.a	ENSGT00950000182787.C.p.b	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Guppy	MODERN SPECIES	461	ENSPREG00000017571	bmp10 (ENSPREG00000017589)	ENSPREG00000017612	ERLIN2 (ENSPREG00000017620)	add2 (ENSPREG00000017646)	figla (ENSPREG00000017683)	ENSPREG00000017715	ENSPREG00000017787	ENSPREG00000018383	ENSPREG00000018389	tet3 (ENSPREG00000018405)	ap3m2 (ENSPREG00000018421)	kat6a (ENSPREG00000018455)	ENSPREG00000018512	sema4c (ENSPREG00000018529)	tbx1 (ENSPREG00000018558) #22	gnb1l (ENSPREG00000018567) #23	TXNRD2 (ENSPREG00000018592) #25	arvcfb (ENSPREG00000018675) #27	tango2 (ENSPREG00000018846) #28	dgcr8 (ENSPREG00000018877) #29	trmt2a (ENSPREG00000018920) #30	ENSPREG00000018939	ranbp1 (ENSPREG00000018948)	zdhhc8b (ENSPREG00000019009) #32	pgam5 (ENSPREG00000019141)	ankle2 (ENSPREG00000019167)	golga3 (ENSPREG00000019188)	chfr (ENSPREG00000019246)	FBRSL1 (ENSPREG00000019349)	GALNT9 (ENSPREG00000019615)
NAME_6	ANCESTRAL SPECIES	9																ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f
Sailfin molly	MODERN SPECIES	1702																tbx1 (ENSPLAG00000016100) #22	ENSPLAG00000016079 #23
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	333														tbx1 (ENSPFOG00000009540) #22	gnb1l (ENSPFOG00000009677) #23	tbx1 (ENSPFOG00000009621) #22	TXNRD2 (ENSPFOG00000009809) #25	arvcfb (ENSPFOG00000010166) #27	tango2 (ENSPFOG00000010604) #28	dgcr8 (ENSPFOG00000010796) #29	trmt2a (ENSPFOG00000010903) #30	ranbp1 (ENSPFOG00000011003)	zdhhc8b (ENSPFOG00000011059) #32	pgam5 (ENSPFOG00000011166)	ankle2 (ENSPFOG00000011216)	golga3 (ENSPFOG00000011295)	ENSPFOG00000011465	chfr (ENSPFOG00000011481)	FBRSL1 (ENSPFOG00000011627)	GALNT9 (ENSPFOG00000011780)	atad1a (ENSPFOG00000012028)
Amazon molly	MODERN SPECIES	333																tbx1 (ENSPFOG00000009540) #22	gnb1l (ENSPFOG00000009677) #23	tbx1 (ENSPFOG00000009621) #22	TXNRD2 (ENSPFOG00000009809) #25	arvcfb (ENSPFOG00000010166) #27	tango2 (ENSPFOG00000010604) #28	dgcr8 (ENSPFOG00000010796) #29	trmt2a (ENSPFOG00000010903) #30	ranbp1 (ENSPFOG00000011003)	zdhhc8b (ENSPFOG00000011059) #32	pgam5 (ENSPFOG00000011166)	ankle2 (ENSPFOG00000011216)	golga3 (ENSPFOG00000011295)	ENSPFOG00000011465	chfr (ENSPFOG00000011481)	FBRSL1 (ENSPFOG00000011627)
NAME_4	ANCESTRAL SPECIES	43	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00940000167358	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306
Mummichog	MODERN SPECIES	236	arhgap25 (ENSFHEG00000006308)	ENSFHEG00000006318	ERLIN2 (ENSFHEG00000006359)	add2 (ENSFHEG00000006376)	figla (ENSFHEG00000006389)	hk2 (ENSFHEG00000006410)	ENSFHEG00000006426	ENSFHEG00000006440	ENSFHEG00000006558	tet3 (ENSFHEG00000006573)	ap3m2 (ENSFHEG00000006614)	kat6a (ENSFHEG00000006701)	ENSFHEG00000006726	sema4c (ENSFHEG00000006740)	ENSFHEG00000006754	tbx1 (ENSFHEG00000006790) #22	gnb1l (ENSFHEG00000006802) #23	TXNRD2 (ENSFHEG00000006885) #25	arvcfb (ENSFHEG00000006930) #27	tango2 (ENSFHEG00000006990) #28	dgcr8 (ENSFHEG00000007016) #29	ENSFHEG00000007024	trmt2a (ENSFHEG00000007062) #30	ranbp1 (ENSFHEG00000007072)	zdhhc8b (ENSFHEG00000007083) #32	pgam5 (ENSFHEG00000007095)	ankle2 (ENSFHEG00000007106)	golga3 (ENSFHEG00000007219)	chfr (ENSFHEG00000007241)	GAS8 (ENSFHEG00000007250)
Sheepshead minnow	MODERN SPECIES	385																tbx1 (ENSCVAG00000000889) #22	gnb1l (ENSCVAG00000008512) #23	TXNRD2 (ENSCVAG00000008543) #25	arvcfb (ENSCVAG00000008581) #27	tango2 (ENSCVAG00000008605) #28	dgcr8 (ENSCVAG00000008664) #29	trmt2a (ENSCVAG00000008685) #30	ENSCVAG00000008708	ranbp1 (ENSCVAG00000008727)	zdhhc8b (ENSCVAG00000008734) #32	pgam5 (ENSCVAG00000008773)	ankle2 (ENSCVAG00000008815)	golga3 (ENSCVAG00000008831)	chfr (ENSCVAG00000008839)	ENSCVAG00000008912	ENSCVAG00000008924
Cod	MODERN SPECIES	19	cmya5 (ENSGMOG00000010684)	mtx3 (ENSGMOG00000010669)	thbs4a (ENSGMOG00000010650)	serinc5 (ENSGMOG00000010632)	cdk7 (ENSGMOG00000010620)	ENSGMOG00000026056	add2 (ENSGMOG00000008103)	figla (ENSGMOG00000033185)	hk2 (ENSGMOG00000008089)	ENSGMOG00000022911	tet3 (ENSGMOG00000026685)	ap3m2 (ENSGMOG00000008074)	kat6a (ENSGMOG00000034583)	ENSGMOG00000029234	sema4c (ENSGMOG00000008050)	tbx1 (ENSGMOG00000018613) #22	gnb1l (ENSGMOG00000018602) #23	TXNRD2 (ENSGMOG00000018581) #25	ARVCF (ENSGMOG00000034656) #27	TANGO2 (ENSGMOG00000007735) #28	DGCR8 (ENSGMOG00000007715) #29	ENSGMOG00000023669	TRMT2A (ENSGMOG00000007707) #30	ENSGMOG00000007701	ENSGMOG00000007695 #32	pgam5 (ENSGMOG00000007688)	ANKLE2 (ENSGMOG00000007676)	golga3 (ENSGMOG00000007665)	chfr (ENSGMOG00000007630)	ENSGMOG00000034511	ENSGMOG00000007611
Protacanthopterygii	ANCESTRAL SPECIES	93	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832.k #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00900000141073 #31	ENSGT00940000154389.b	ENSGT00940000158044.a #32	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	37	ENSGT00940000167361.c	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606 #23	ENSGT00940000158832.k.b #25	ENSGT00940000157027.n.a.c #27	ENSGT00390000012733.m #28	ENSGT00390000015977.f #29	ENSGT00530000063723.a.d #30	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #32	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606 #23	ENSGT00940000158832.k.b #25	ENSGT00940000157027.n.a.c #27	ENSGT00390000012733.m #28	ENSGT00390000015977.f #29	ENSGT00530000063723.a.d #30	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #32	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Salmo	ANCESTRAL SPECIES		ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606 #23	ENSGT00940000158832.k.b #25	ENSGT00940000157027.n.a.c #27	ENSGT00390000012733.m #28	ENSGT00390000015977.f #29	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #32	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a	ENSGT00950000183200.B.i
Atlantic salmon	MODERN SPECIES	16	ENSSSAG00000080206	ENSSSAG00000080234	ENSSSAG00000112711	ENSSSAG00000080241	zgc:65851 (ENSSSAG00000080297)	ENSSSAG00000085309	add2 (ENSSSAG00000080372)	hk2 (ENSSSAG00000080458)	ENSSSAG00000089549	tet3 (ENSSSAG00000080979)	ap3m2 (ENSSSAG00000115977)	kat6a (ENSSSAG00000080991)	ENSSSAG00000104191	sema4c (ENSSSAG00000081000)	gnb1l (ENSSSAG00000081005) #23	tbx1 (ENSSSAG00000081001) #22	ARVCF (ENSSSAG00000081080) #27	ENSSSAG00000114183	ENSSSAG00000086975	tango2 (ENSSSAG00000081113) #28	DGCR8 (ENSSSAG00000081127) #29	ENSSSAG00000110966	ranbp1 (ENSSSAG00000081173)	ENSSSAG00000081185 #32	pgam5 (ENSSSAG00000081207)	ANKLE2 (ENSSSAG00000095591)	golga3 (ENSSSAG00000081231)	ENSSSAG00000082369	chfr (ENSSSAG00000081316)	ENSSSAG00000081333	ENSSSAG00000081957
River trout	MODERN SPECIES	19	bmp10 (ENSSTUG00000021377)	arhgap25 (ENSSTUG00000021382)	cds2 (ENSSTUG00000021397)	zgc:65851 (ENSSTUG00000021451)	ENSSTUG00000021590	snrnp27 (ENSSTUG00000021597)	add2 (ENSSTUG00000021628)	hk2 (ENSSTUG00000021812)	NPFFR1 (ENSSTUG00000026378)	ENSSTUG00000026487	tet3 (ENSSTUG00000026499)	ap3m2 (ENSSTUG00000026573)	kat6a (ENSSTUG00000026597)	ENSSTUG00000026655	sema4c (ENSSTUG00000026676)	tbx1 (ENSSTUG00000026740) #22	gnb1l (ENSSTUG00000026763) #23	TXNRD2 (ENSSTUG00000026809) #25	arvcfb (ENSSTUG00000027951) #27	tango2 (ENSSTUG00000028113) #28	dgcr8 (ENSSTUG00000028218) #29	ranbp1 (ENSSTUG00000029154)	zdhhc8b (ENSSTUG00000029223) #32	pgam5 (ENSSTUG00000029253)	ankle2 (ENSSTUG00000029278)	golga3 (ENSSTUG00000029405)	chfr (ENSSTUG00000032136)	FBRSL1 (ENSSTUG00000032598)	ENSSTUG00000033029	ENSSTUG00000033056	ENSSTUG00000033059
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000167361.c	ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606.e #23	ENSGT00940000158832.k.b #25	ENSGT00940000157027.n.a.c #27	ENSGT00390000012733.m #28	ENSGT00390000015977.f #29	ENSGT00530000063723.a.d #30	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #32	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000156279.e.f	ENSGT00950000183015.A.i	ENSGT00940000158877.c	ENSGT00940000165501.e.b	ENSGT00940000159446.e.a	ENSGT00730000111237.l	ENSGT00940000159299.c	ENSGT00950000182787.C.m	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT01010000223359	ENSGT00940000157631.v	ENSGT00940000157991.c	ENSGT00940000156962.wb	ENSGT00990000204853.b	ENSGT00940000159885.m	ENSGT00940000154816.a.b.e #22	ENSGT00390000018606.e #23	ENSGT00940000158832.k.b #25	ENSGT00940000157027.n.a.c #27	ENSGT00390000012733.m #28	ENSGT00390000015977.f #29	ENSGT00530000063723.a.d #30	ENSGT00940000154389.b.p	ENSGT00940000158044.a.c #32	ENSGT00390000004796.c.a	ENSGT00390000016767.q.a	ENSGT00950000183078.b.b.e	ENSGT00400000022306.g	ENSGT00940000160709.ab.b.a	ENSGT00940000156599.h.a	ENSGT01010000222287.B.a.a.a.b.a
Coho salmon	MODERN SPECIES	22	bmp10 (ENSOKIG00005001614)	arhgap25 (ENSOKIG00005001609)	cds2 (ENSOKIG00005001211)	zgc:65851 (ENSOKIG00005001093)	ENSOKIG00005001084	snrnp27 (ENSOKIG00005001078)	add2 (ENSOKIG00005001055)	hk2 (ENSOKIG00005000904)	NPFFR1 (ENSOKIG00005000848)	ENSOKIG00005000845	tet3 (ENSOKIG00005000827)	ap3m2 (ENSOKIG00005000812)	kat6a (ENSOKIG00005000763)	ENSOKIG00005000746	sema4c (ENSOKIG00005000732)	tbx1 (ENSOKIG00005000720) #22	gnb1l (ENSOKIG00005000714) #23	TXNRD2 (ENSOKIG00005000525) #25	arvcfb (ENSOKIG00005000352) #27	tango2 (ENSOKIG00005000296) #28	DGCR8 (ENSOKIG00005000220) #29	TRMT2A (ENSOKIG00005000130) #30	ENSOKIG00005000084	zdhhc8b (ENSOKIG00005000053) #32	pgam5 (ENSOKIG00005038263)	ANKLE2 (ENSOKIG00005038179)	golga3 (ENSOKIG00005035210)	chfr (ENSOKIG00005034849)	FBRSL1 (ENSOKIG00005034536)	GALNT9 (ENSOKIG00005034468)	ENSOKIG00005034465
Chinook salmon	MODERN SPECIES	28	ERLIN2 (ENSOTSG00005011931)	ENSOTSG00005011928	bmp10 (ENSOTSG00005011926)	arhgap25 (ENSOTSG00005011924)	cds2 (ENSOTSG00005011849)	zgc:65851 (ENSOTSG00005011657)	ENSOTSG00005011652	add2 (ENSOTSG00005011621)	hk2 (ENSOTSG00005007910)	NPFFR1 (ENSOTSG00005007811)	tet3 (ENSOTSG00005007794)	ap3m2 (ENSOTSG00005007772)	kat6a (ENSOTSG00005007627)	ENSOTSG00005007621	sema4c (ENSOTSG00005035224)	tbx1 (ENSOTSG00005035220) #22	gnb1l (ENSOTSG00005035217) #23	TXNRD2 (ENSOTSG00005034945) #25	arvcfb (ENSOTSG00005034910) #27	tango2 (ENSOTSG00005034901) #28	dgcr8 (ENSOTSG00005034681) #29	trmt2a (ENSOTSG00005034679) #30	ranbp1 (ENSOTSG00005034671)	zdhhc8b (ENSOTSG00005034670) #32	pgam5 (ENSOTSG00005034669)	ankle2 (ENSOTSG00005034668)	golga3 (ENSOTSG00005029042)	chfr (ENSOTSG00005028920)	FBRSL1 (ENSOTSG00005028915)	GALNT9 (ENSOTSG00005028911)	ENSOTSG00005028910
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000003232	cds2 (ENSOMYG00000003017)	zgc:65851 (ENSOMYG00000002902)	ENSOMYG00000002856	add2 (ENSOMYG00000002827)	hk2 (ENSOMYG00000002399)	ENSOMYG00000001572	ENSOMYG00000053575	ENSOMYG00000001553	ENSOMYG00000051283	tet3 (ENSOMYG00000001537)	ap3m2 (ENSOMYG00000001490)	kat6a (ENSOMYG00000001433)	ENSOMYG00000001373	sema4c (ENSOMYG00000001280)	tbx1 (ENSOMYG00000047748) #22	gnb1l (ENSOMYG00000047745) #23	TXNRD2 (ENSOMYG00000047721) #25	ARVCF (ENSOMYG00000047699) #27	TANGO2 (ENSOMYG00000047695) #28	DGCR8 (ENSOMYG00000047682) #29	TRMT2A (ENSOMYG00000047676) #30	ENSOMYG00000047674	ENSOMYG00000047672 #32	ENSOMYG00000052971	pgam5 (ENSOMYG00000047671)	ANKLE2 (ENSOMYG00000047668)	golga3 (ENSOMYG00000047633)	chfr (ENSOMYG00000047582)	ENSOMYG00000047581	ENSOMYG00000056871
Huchen	MODERN SPECIES	25																tbx1 (ENSHHUG00000024598) #22	gnb1l (ENSHHUG00000024591) #23	TXNRD2 (ENSHHUG00000024346) #25	arvcfb (ENSHHUG00000024259) #27	tango2 (ENSHHUG00000024197) #28	dgcr8 (ENSHHUG00000024181) #29	trmt2a (ENSHHUG00000024177) #30	ranbp1 (ENSHHUG00000024149)	zdhhc8b (ENSHHUG00000024136) #32	pgam5 (ENSHHUG00000024130)	ankle2 (ENSHHUG00000024097)	golga3 (ENSHHUG00000024031)	chfr (ENSHHUG00000023992)	ENSHHUG00000023988	ENSHHUG00000023983	ENSHHUG00000023981
Salmoninae	ANCESTRAL SPECIES	1129																ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #25	ENSGT00940000157027.n.a.d #27
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #25	ENSGT00940000157027.n.a.d #27	ENSGT00390000012733.n #28	ENSGT00390000015977.e #29	ENSGT00900000143393	ENSGT00530000063723.a.c #30	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #32	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d.a	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00390000018606.f #23	ENSGT00940000158832.k.a #25	ENSGT00940000157027.n.a.d #27	ENSGT00390000012733.n #28	ENSGT00390000015977.e #29	ENSGT00530000063723.a.c #30	ENSGT00900000143393	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #32	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d.a	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.a.a	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00390000018606.f #23	ENSGT00940000158832.k.a #25	ENSGT00940000157027.n.a.d #27	ENSGT00390000012733.n #28	ENSGT00390000015977.e #29	ENSGT00530000063723.a.c #30	ENSGT00900000143393	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #32	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Coho salmon	MODERN SPECIES	28	CDS2 (ENSOKIG00005006616)	zgc:65851 (ENSOKIG00005007615)	MXD1 (ENSOKIG00005007622)	snrnp27 (ENSOKIG00005007628)	add2 (ENSOKIG00005007650)	figla (ENSOKIG00005007699)	hk2 (ENSOKIG00005007724)	ENSOKIG00005008005	NPFFR1 (ENSOKIG00005008014)	tet3 (ENSOKIG00005008034)	ap3m2 (ENSOKIG00005008150)	kat6a (ENSOKIG00005008218)	ENSOKIG00005008642	sema4c (ENSOKIG00005008703)	ENSOKIG00005008816	tbx1 (ENSOKIG00005008829) #22	gnb1l (ENSOKIG00005008862) #23	TXNRD2 (ENSOKIG00005008890) #25	ARVCF (ENSOKIG00005009048) #27	ENSOKIG00005009213	TANGO2 (ENSOKIG00005009224) #28	dgcr8 (ENSOKIG00005009307) #29	trmt2a (ENSOKIG00005010127) #30	ENSOKIG00005011256	ranbp1 (ENSOKIG00005011262)	ZDHHC8 (ENSOKIG00005011304) #32	pgam5 (ENSOKIG00005011328)	ankle2 (ENSOKIG00005011340)	golga3 (ENSOKIG00005011755)	chfr (ENSOKIG00005015019)	FBRSL1 (ENSOKIG00005015412)
Chinook salmon	MODERN SPECIES	3	bmp10 (ENSOTSG00005045654)	arhgap25 (ENSOTSG00005045656)	cds2 (ENSOTSG00005045658)	zgc:65851 (ENSOTSG00005045707)	MXD1 (ENSOTSG00005045708)	ENSOTSG00005045710	add2 (ENSOTSG00005045711)	figla (ENSOTSG00005045712)	hk2 (ENSOTSG00005045715)	NPFFR1 (ENSOTSG00005045722)	tet3 (ENSOTSG00005045812)	ap3m2 (ENSOTSG00005045815)	kat6a (ENSOTSG00005045816)	ENSOTSG00005045817	sema4c (ENSOTSG00005045818)	tbx1 (ENSOTSG00005045821) #22	gnb1l (ENSOTSG00005045822) #23	TXNRD2 (ENSOTSG00005045824) #25	arvcfb (ENSOTSG00005045826) #27	tango2 (ENSOTSG00005045856) #28	dgcr8 (ENSOTSG00005045857) #29	trmt2a (ENSOTSG00005046128) #30	zdhhc8b (ENSOTSG00005046153) #32	pgam5 (ENSOTSG00005046158)	ankle2 (ENSOTSG00005046163)	golga3 (ENSOTSG00005046198)	chfr (ENSOTSG00005046721)	FBRSL1 (ENSOTSG00005046725)	GALNT9 (ENSOTSG00005046727)	atad1a (ENSOTSG00005046728)	ENSOTSG00005046729
Rainbow trout	MODERN SPECIES	2	zgc:65851 (ENSOMYG00000037871)	ENSOMYG00000076338	ENSOMYG00000037865	snrnp27 (ENSOMYG00000057774)	add2 (ENSOMYG00000037852)	figla (ENSOMYG00000037836)	hk2 (ENSOMYG00000032225)	ENSOMYG00000031356	tet3 (ENSOMYG00000031346)	ENSOMYG00000056032	ap3m2 (ENSOMYG00000031323)	ENSOMYG00000077219	kat6a (ENSOMYG00000031263)	ENSOMYG00000031218	sema4c (ENSOMYG00000031056)	tbx1 (ENSOMYG00000030979) #22	ENSOMYG00000031010	TXNRD2 (ENSOMYG00000030855) #25	ARVCF (ENSOMYG00000029864) #27	TANGO2 (ENSOMYG00000029402) #28	DGCR8 (ENSOMYG00000028643) #29	ENSOMYG00000028285	TRMT2A (ENSOMYG00000026956) #30	ENSOMYG00000026571	ENSOMYG00000030202	ENSOMYG00000026468 #32	pgam5 (ENSOMYG00000026424)	ANKLE2 (ENSOMYG00000026394)	golga3 (ENSOMYG00000020924)	chfr (ENSOMYG00000020516)	ENSOMYG00000020396
Salmo	ANCESTRAL SPECIES	19	ENSGT00940000156279.e.e	ENSGT00950000183015.A.j	ENSGT00940000158877.d	ENSGT00940000165501.e.a	ENSGT00940000159446.e.b	ENSGT00730000111237.k	ENSGT00940000159299.d.b	ENSGT00440000033552	ENSGT00950000182787.C.n	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00940000157631.u	ENSGT00940000157991.d	ENSGT00940000156962.vb	ENSGT00990000204853.a	ENSGT00940000159885.n	ENSGT00940000154816.a.b.f #22	ENSGT00990000211430	ENSGT00940000158832.k.a #25	ENSGT00940000157027.n.a.d #27	ENSGT00390000012733.n #28	ENSGT00390000015977.e #29	ENSGT00900000143393	ENSGT00530000063723.a.c #30	ENSGT00940000154389.b.o	ENSGT00940000158044.a.d #32	ENSGT00390000004796.c.b	ENSGT00390000016767.q.b	ENSGT00950000183078.b.b.f	ENSGT00400000022306.h	ENSGT00940000160709.ab.b.b	ENSGT00940000156599.h.b
Atlantic salmon	MODERN SPECIES	12	cds2 (ENSSSAG00000088151)	zgc:65851 (ENSSSAG00000077586)	ENSSSAG00000077583	snrnp27 (ENSSSAG00000077570)	add2 (ENSSSAG00000077022)	ENSSSAG00000077014	ENSSSAG00000114780	hk2 (ENSSSAG00000073421)	ENSSSAG00000080974	tet3 (ENSSSAG00000072932)	ENSSSAG00000103620	ap3m2 (ENSSSAG00000080985)	kat6a (ENSSSAG00000072653)	ENSSSAG00000072640	sema4c (ENSSSAG00000072487)	tbx1 (ENSSSAG00000072468) #22	ENSSSAG00000072461	ENSSSAG00000072453 #25	TXNRD2 (ENSSSAG00000081023) #25	ENSSSAG00000062174	ARVCF (ENSSSAG00000070791) #27	TANGO2 (ENSSSAG00000070735) #28	DGCR8 (ENSSSAG00000069919) #29	ENSSSAG00000069888	TRMT2A (ENSSSAG00000068818) #30	RANG (ENSSSAG00000068670)	ENSSSAG00000068646 #32	pgam5 (ENSSSAG00000068639)	ANKLE2 (ENSSSAG00000108432)	golga3 (ENSSSAG00000064385)	chfr (ENSSSAG00000109055)
River trout	MODERN SPECIES	39	ENSSTUG00000001482	bmp10 (ENSSTUG00000001478)	cds2 (ENSSTUG00000001218)	zgc:65851 (ENSSTUG00000001190)	MXD1 (ENSSTUG00000001183)	snrnp27 (ENSSTUG00000001175)	add2 (ENSSTUG00000050817)	figla (ENSSTUG00000050798)	hk2 (ENSSTUG00000050570)	NPFFR1 (ENSSTUG00000050481)	tet3 (ENSSTUG00000050463)	ap3m2 (ENSSTUG00000050456)	kat6a (ENSSTUG00000050392)	ENSSTUG00000050380	sema4c (ENSSTUG00000050375)	tbx1 (ENSSTUG00000050366) #22	ENSSTUG00000050363	TXNRD2 (ENSSTUG00000050360) #25	ENSSTUG00000050359	arvcfb (ENSSTUG00000050331) #27	tango2 (ENSSTUG00000050306) #28	dgcr8 (ENSSTUG00000050281) #29	ENSSTUG00000050270	trmt2a (ENSSTUG00000050197) #30	ranbp1 (ENSSTUG00000050168)	zdhhc8b (ENSSTUG00000050165) #32	pgam5 (ENSSTUG00000050161)	ankle2 (ENSSTUG00000050148)	golga3 (ENSSTUG00000049880)	chfr (ENSSTUG00000049810)	FBRSL1 (ENSSTUG00000049803)
Huchen	MODERN SPECIES	997																tbx1 (ENSHHUG00000046442) #22	ENSHHUG00000046437 #25	ENSHHUG00000046431 #25	arvcfb (ENSHHUG00000046022) #27
Northern pike	MODERN SPECIES	12	cds2 (ENSELUG00000005751)	zgc:65851 (ENSELUG00000005774)	ENSELUG00000005790	snrnp27 (ENSELUG00000005829)	add2 (ENSELUG00000005908)	figla (ENSELUG00000005936)	hk2 (ENSELUG00000005968)	NPFFR1 (ENSELUG00000006131)	tet3 (ENSELUG00000006238)	ap3m2 (ENSELUG00000001382)	kat6a (ENSELUG00000006325)	ENSELUG00000006380	sema4c (ENSELUG00000006455)	ENSELUG00000026545	ENSELUG00000026890	tbx1 (ENSELUG00000006473) #22	gnb1l (ENSELUG00000006506) #23	TXNRD2 (ENSELUG00000006541) #25	arvcfb (ENSELUG00000006868) #27	tango2 (ENSELUG00000006944) #28	dgcr8 (ENSELUG00000006969) #29	trmt2a (ENSELUG00000006996) #30	ENSELUG00000006974	RANBP1 (ENSELUG00000007065) #31	zdhhc8b (ENSELUG00000007087) #32	pgam5 (ENSELUG00000007105)	ankle2 (ENSELUG00000007115)	golga3 (ENSELUG00000007469)	chfr (ENSELUG00000007647)	FBRSL1 (ENSELUG00000007797)	ENSELUG00000024671
Otomorpha	ANCESTRAL SPECIES	97	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00900000143393	ENSGT00530000063723.a #30	ENSGT00940000154389.b	ENSGT00900000141073 #31	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a #32	ENSGT00400000022306	ENSGT00940000160709
Clupeiformes	ANCESTRAL SPECIES	73	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157027.n.a #27	ENSGT00390000012733 #28	ENSGT00390000015977 #29	ENSGT00530000063723.a #30	ENSGT00900000143393	ENSGT00900000141073 #31	ENSGT00940000154389.b	ENSGT00950000183078.b.b	ENSGT00390000016767	ENSGT00390000004796	ENSGT00940000158044.a #32	ENSGT00400000022306	ENSGT00940000160709
Denticle herring	MODERN SPECIES	2	bmp10 (ENSDCDG00000018939)	arhgap25 (ENSDCDG00000018981)	cds2 (ENSDCDG00000019064)	zgc:65851 (ENSDCDG00000021503)	ENSDCDG00000021945	snrnp27 (ENSDCDG00000021946)	add2 (ENSDCDG00000021966)	figla (ENSDCDG00000022329)	hk2 (ENSDCDG00000022344)	ENSDCDG00000022636	tet3 (ENSDCDG00000022909)	ap3m2 (ENSDCDG00000022914)	kat6a (ENSDCDG00000022927)	ENSDCDG00000022941	sema4c (ENSDCDG00000022946)	tbx1 (ENSDCDG00000022975) #22	gnb1l (ENSDCDG00000022980) #23	TXNRD2 (ENSDCDG00000022996) #25	arvcfb (ENSDCDG00000023289) #27	tango2 (ENSDCDG00000025871) #28	dgcr8 (ENSDCDG00000025887) #29	trmt2a (ENSDCDG00000026030) #30	ENSDCDG00000026403	RANBP1 (ENSDCDG00000026406) #31	golga3 (ENSDCDG00000026465)	ankle2 (ENSDCDG00000027240)	pgam5 (ENSDCDG00000027242)	zdhhc8b (ENSDCDG00000027244) #32	chfr (ENSDCDG00000027446)	FBRSL1 (ENSDCDG00000027475)	GALNT9 (ENSDCDG00000027607)
Atlantic herring	MODERN SPECIES	23	cds2 (ENSCHAG00000000928)	zgc:65851 (ENSCHAG00000027688)	ENSCHAG00000027687	ENSCHAG00000027686	snrnp27 (ENSCHAG00000027685)	add2 (ENSCHAG00000027679)	figla (ENSCHAG00000027670)	ENSCHAG00000027668	hk2 (ENSCHAG00000027656)	ENSCHAG00000027639	tet3 (ENSCHAG00000027625)	ap3m2 (ENSCHAG00000027617)	kat6a (ENSCHAG00000027608)	ENSCHAG00000027601	sema4c (ENSCHAG00000027593)	tbx1 (ENSCHAG00000027586) #22	gnb1l (ENSCHAG00000027582) #23	TXNRD2 (ENSCHAG00000027573) #25	arvcfb (ENSCHAG00000027519) #27	tango2 (ENSCHAG00000027490) #28	dgcr8 (ENSCHAG00000027475) #29	trmt2a (ENSCHAG00000027453) #30	ranbp1 (ENSCHAG00000027429)	golga3 (ENSCHAG00000027310)	ankle2 (ENSCHAG00000027242)	pgam5 (ENSCHAG00000027229)	zdhhc8b (ENSCHAG00000027188) #32	chfr (ENSCHAG00000027104)	ENSCHAG00000027085	FBRSL1 (ENSCHAG00000027020)	GALNT9 (ENSCHAG00000027007)
Otophysi	ANCESTRAL SPECIES	168	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986
Cyprinoidei	ANCESTRAL SPECIES	16	ENSGT00940000156317.w.b.a	ENSGT00530000063691.a	ENSGT00950000183162.a.b.i.b.a	ENSGT00940000165501	ENSGT00940000159446.a	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991.a	ENSGT00940000156962.lb	ENSGT00940000154352.A	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157251	ENSGT00940000155735.q.c	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000015428	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	19	ENSGT00530000063691.a.g	ENSGT00950000183162.a.b.i.b.a	ENSGT00900000140979.a.b.db	ENSGT00940000165501.c.a	ENSGT00940000159446.a.a	ENSGT00730000111237	ENSGT00940000159299.a	ENSGT00440000033552	ENSGT00950000182787.C.k	ENSGT01070000253744.b.a.a.a.b.a	ENSGT00940000157631.o	ENSGT00940000157991.a	ENSGT00940000156962.lb.a	ENSGT00940000154352.A.f.a	ENSGT00940000159885.g	ENSGT00940000154816.a.b.g #22	ENSGT00390000018606.c #23	ENSGT00940000158832.g.a #25	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000015428	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b
Cyprininae_a	ANCESTRAL SPECIES	26	ENSGT00940000156317.w.b.a.a	ENSGT00530000063691.a.g	ENSGT00950000183162.a.b.i.b.a	ENSGT00940000165501.c.a	ENSGT00940000159446.a.a	ENSGT00730000111237	ENSGT00940000159299.a	ENSGT00440000033552	ENSGT00950000182787.C.k	ENSGT01070000253744.b.a.a.a.b.a	ENSGT00940000157631.o	ENSGT00940000157991.a	ENSGT00940000156962.lb.a	ENSGT00940000154352.A.f.a	ENSGT00940000159885.g	ENSGT00940000154816.a.b.g #22	ENSGT00390000018606.c #23	ENSGT00940000158832.g.a #25	ENSGT00940000157251	ENSGT00940000155735.q.c.a	ENSGT00910000144281.i	ENSGT00940000167167.b	ENSGT00940000160605.a	ENSGT00940000155882.a.b.a.a	ENSGT00390000017751.n	ENSGT00940000154006.a.c	ENSGT00390000001654	ENSGT00940000158390.g	ENSGT00730000110943.B.d.a.a	ENSGT00940000157986.b	ENSGT00950000183200.B.h
Common carp reference	MODERN SPECIES	7	purba (ENSCCRG00000016891)	h2az2a (ENSCCRG00000051659)	zgc:65851 (ENSCCRG00000070611)	ENSCCRG00000081568	add2 (ENSCCRG00000042603)	figla (ENSCCRG00000042552)	hk2 (ENSCCRG00000012171)	ENSCCRG00000033497	ENSCCRG00000065797	tet3 (ENSCCRG00000066965)	ap3m2 (ENSCCRG00000000341)	kat6a (ENSCCRG00000074038)	ENSCCRG00000081919	si:ch211-244o22.2 (ENSCCRG00000051535)	sema4c (ENSCCRG00000082690)	tbx1 (ENSCCRG00000036080) #22	gnb1l (ENSCCRG00000039704) #23	TXNRD2 (ENSCCRG00000057214) #25	pebp1 (ENSCCRG00000005062)	TAOK3 (ENSCCRG00000033318)	suds3 (ENSCCRG00000005869)	ENSCCRG00000010420	hspb8 (ENSCCRG00000080290)	ENSCCRG00000010417	xbp1 (ENSCCRG00000044401)	ENSCCRG00000043618	coq5 (ENSCCRG00000055912)	kremen1 (ENSCCRG00000044690)	ENSCCRG00000062505	ENSCCRG00000060093	ENSCCRG00000044630
Golden-line barbel	MODERN SPECIES	433											tet3 (ENSSGRG00000048372)	ap3m2 (ENSSGRG00000048386)	kat6a (ENSSGRG00000048502)	si:ch211-244o22.2 (ENSSGRG00000048505)	sema4c (ENSSGRG00000048510)	tbx1 (ENSSGRG00000048526) #22	gnb1l (ENSSGRG00000048534) #23	ENSSGRG00000048540	pebp1 (ENSSGRG00000048714)	suds3 (ENSSGRG00000048722)
Goldfish	MODERN SPECIES	44	purba (ENSCARG00000016083)	ENSCARG00000016040	zgc:65851 (ENSCARG00000016022)	ENSCARG00000016019	snrnp27 (ENSCARG00000016013)	add2 (ENSCARG00000015852)	figla (ENSCARG00000015830)	hk2 (ENSCARG00000012783)	ENSCARG00000012641	tet3 (ENSCARG00000012619)	ap3m2 (ENSCARG00000012580)	kat6a (ENSCARG00000006569)	si:ch211-244o22.2 (ENSCARG00000006530)	sema4c (ENSCARG00000006257)	ENSCARG00000006217	tbx1 (ENSCARG00000006077) #22	gnb1l (ENSCARG00000006048) #23	ENSCARG00000006041	TXNRD2 (ENSCARG00000005541) #25	pebp1 (ENSCARG00000005506)	TAOK3 (ENSCARG00000005361)	suds3 (ENSCARG00000005332)	ENSCARG00000005321	hspb8 (ENSCARG00000005317)	ENSCARG00000005309	ENSCARG00000005294	xbp1 (ENSCARG00000005276)	ENSCARG00000005269	ZNRF3 (ENSCARG00000005245)	coq5 (ENSCARG00000005229)	kremen1 (ENSCARG00000005209)
Cyprininae	ANCESTRAL SPECIES	267	ENSGT00940000155135.eb.a.a	ENSGT00390000004511.c.b.f.a	ENSGT00940000156317.w.b.a.b	ENSGT00530000063691.a.h	ENSGT00950000183162.a.b.i.b.b	ENSGT00940000165501.c.b	ENSGT00940000159446.a.b	ENSGT00940000159299.b	ENSGT00950000182787.C.l	ENSGT01070000253744.b.a.a.a.b.b	ENSGT00940000157631.p	ENSGT00940000157991.b	ENSGT00940000156962.lb.b	ENSGT00940000154352.A.f.b	ENSGT00940000159885.h	ENSGT00940000154816.a.b.h #22	ENSGT00390000018606.d #23	ENSGT00940000158832.g.b #25	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a
Goldfish	MODERN SPECIES	23	osbp2b (ENSCARG00000040672)	camk2b1 (ENSCARG00000040764)	si:dkey-174n20.1 (ENSCARG00000040853)	ENSCARG00000040882	ranbp1 (ENSCARG00000040895)	golga3 (ENSCARG00000041123)	ankle2 (ENSCARG00000042941)	pgam5 (ENSCARG00000043637)	bri3bp (ENSCARG00000043647)	ENSCARG00000043666	tet3 (ENSCARG00000043682)	AP3M2 (ENSCARG00000043794)	kat6a (ENSCARG00000043972)	si:ch211-244o22.2 (ENSCARG00000044132)	sema4c (ENSCARG00000044195)	tbx1 (ENSCARG00000044535) #22	TAOK3 (ENSCARG00000044621)	suds3 (ENSCARG00000044831)	ENSCARG00000044996	ENSCARG00000045008	ENSCARG00000045029	hspb8 (ENSCARG00000045038)	ENSCARG00000045059	xbp1 (ENSCARG00000045072)	ENSCARG00000045100	ENSCARG00000045135	ENSCARG00000045145	ENSCARG00000045156	ENSCARG00000045170	ENSCARG00000045174	ENSCARG00000045177
Cyprininae_a	ANCESTRAL SPECIES	262	ENSGT00940000155135.eb.a.a	ENSGT00390000004511.c.b.f.a	ENSGT00940000156317.w.b.a.b	ENSGT00530000063691.a.h	ENSGT00950000183162.a.b.i.b.b	ENSGT00940000165501.c.b	ENSGT00940000159446.a.b	ENSGT00940000159299.b	ENSGT00950000182787.C.l	ENSGT01070000253744.b.a.a.a.b.b	ENSGT00940000157631.p	ENSGT00940000157991.b	ENSGT00940000156962.lb.b	ENSGT00940000154352.A.f.b	ENSGT00940000159885.h	ENSGT00940000154816.a.b.h #22	ENSGT00390000018606.d #23	ENSGT00940000158832.g.b #25	ENSGT00990000210202	ENSGT00940000155735.q.c.b	ENSGT00910000144281.j	ENSGT00940000167167.a	ENSGT00940000160605.b	ENSGT00940000155882.a.b.a.b	ENSGT00390000017751.m	ENSGT00940000154006.a.d	ENSGT00940000158390.h	ENSGT00730000110943.B.d.a.b	ENSGT00940000157986.a	ENSGT00950000183200.B.g	ENSGT01010000222287.B.a.a.a.b.e.a
Common carp reference	MODERN SPECIES	15	ENSCCRG00000071340	ENSCCRG00000058879	ENSCCRG00000056776	ENSCCRG00000032514	zgc:65851 (ENSCCRG00000058685)	ENSCCRG00000066495	add2 (ENSCCRG00000031781)	ENSCCRG00000052303	tet3 (ENSCCRG00000038994)	ENSCCRG00000001582	kat6a (ENSCCRG00000075196)	ENSCCRG00000061024	si:ch211-244o22.2 (ENSCCRG00000065624)	sema4c (ENSCCRG00000078914)	ENSCCRG00000065939	tbx1 (ENSCCRG00000032911) #22	gnb1l (ENSCCRG00000027647) #23	TXNRD2 (ENSCCRG00000027633) #25	ENSCCRG00000033324	TAOK3 (ENSCCRG00000004967)	suds3 (ENSCCRG00000048809)	ENSCCRG00000021246	hspb8 (ENSCCRG00000021250)	ENSCCRG00000000168	xbp1 (ENSCCRG00000070680)	ENSCCRG00000023015	kremen1 (ENSCCRG00000078190)	ENSCCRG00000021240	slc39a14 (ENSCCRG00000073267)	piwil2 (ENSCCRG00000061919)	ENSCCRG00000040060
Golden-line barbel	MODERN SPECIES	1371																tbx1 (ENSSGRG00000020384) #22	gnb1l (ENSSGRG00000020385) #23	ENSSGRG00000020387 #25	ENSSGRG00000020393	ENSSGRG00000021124	ENSSGRG00000021127	suds3 (ENSSGRG00000021133)
Zebrafish	MODERN SPECIES	20	ENSDARG00000068011	purba (ENSDARG00000068822)	h2az2a (ENSDARG00000068820)	zgc:65851 (ENSDARG00000012281)	ENSDARG00000032039	snrnp27 (ENSDARG00000035625)	add2 (ENSDARG00000074581)	figla (ENSDARG00000087166)	hk2 (ENSDARG00000101482)	ENSDARG00000062631	tet3 (ENSDARG00000062646)	ap3m2 (ENSDARG00000016128)	kat6a (ENSDARG00000018907)	si:ch211-244o22.2 (ENSDARG00000068759)	sema4c (ENSDARG00000079611)	tbx1 (ENSDARG00000031891) #22	gnb1l (ENSDARG00000036293) #23	TXNRD2 (ENSDARG00000094470) #25	TXNRD2 (ENSDARG00000075923) #25	pebp1 (ENSDARG00000042069)	TAOK3 (ENSDARG00000060751)	suds3 (ENSDARG00000073737)	ENSDARG00000114460	ENSDARG00000086327	ENSDARG00000068742	hspb8 (ENSDARG00000058365)	ENSDARG00000105422	xbp1 (ENSDARG00000035622)	znrf3 (ENSDARG00000062573)	coq5 (ENSDARG00000035618)	kremen1 (ENSDARG00000062579)
Characiphysae	ANCESTRAL SPECIES	14	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00940000182449	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c
Channel catfish	MODERN SPECIES	14	trmt2a (ENSIPUG00000016834) #30	ATP6V0A2 (ENSIPUG00000016932)	DNAH10 (ENSIPUG00000016978)	nefl (ENSIPUG00000017157)	mxd1 (ENSIPUG00000017173)	snrnp27 (ENSIPUG00000017182)	add2 (ENSIPUG00000017203)	figla (ENSIPUG00000017254)	hk2 (ENSIPUG00000017279)	NPFFR1 (ENSIPUG00000017374)	tet3 (ENSIPUG00000017449)	ap3m2 (ENSIPUG00000017491)	kat6a (ENSIPUG00000017536)	cdca2 (ENSIPUG00000017664)	sema4c (ENSIPUG00000017679)	tbx1 (ENSIPUG00000017709) #22	gnb1l (ENSIPUG00000017736) #23	TXNRD2 (ENSIPUG00000017765) #25	TAOK3 (ENSIPUG00000017918)	pebp1 (ENSIPUG00000018071)	suds3 (ENSIPUG00000018099)	ENSIPUG00000018138	hspb8 (ENSIPUG00000018154)	HSPB1 (ENSIPUG00000018214)	ENSIPUG00000018179	xbp1 (ENSIPUG00000018225)	znrf3 (ENSIPUG00000018241)	coq5 (ENSIPUG00000018269)	kremen1 (ENSIPUG00000018289)	susd2 (ENSIPUG00000018306)	slc39a14 (ENSIPUG00000018390)
Characiphysae_b	ANCESTRAL SPECIES	12	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00390000001654	ENSGT00940000158390	ENSGT00730000110943.B.d.a	ENSGT00940000157986.c	ENSGT00950000183200.B
Characoidei	ANCESTRAL SPECIES	140	ENSGT00940000156279.e	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00940000165501	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT01070000253744.b.a.a.a.b	ENSGT00940000157631	ENSGT00940000157991	ENSGT00940000156962	ENSGT00990000204853	ENSGT00940000159885	ENSGT00940000154816.a.b #22	ENSGT00390000018606 #23	ENSGT00940000158832 #25	ENSGT00940000157251	ENSGT00940000155735.q	ENSGT00910000144281	ENSGT00940000167167	ENSGT00940000160605	ENSGT00940000155882.a.b.a	ENSGT00390000017751
Red-bellied piranha	MODERN SPECIES	320												ap3m2 (ENSPNAG00000013821)	kat6a (ENSPNAG00000013788)	ENSPNAG00000013723	sema4c (ENSPNAG00000013700)	tbx1 (ENSPNAG00000013637) #22	gnb1l (ENSPNAG00000002844) #23
Mexicana tetra	MODERN SPECIES	38	ENSAMXG00000034497	snrnp27 (ENSAMXG00000041033)	add2 (ENSAMXG00000043018)	figla (ENSAMXG00000039571)	ENSAMXG00000037954	hk2 (ENSAMXG00000003475)	ENSAMXG00000033971	ap3m2 (ENSAMXG00000031890)	tet3 (ENSAMXG00000015236)	ENSAMXG00000038247	kat6a (ENSAMXG00000015159)	ENSAMXG00000015080	sema4c (ENSAMXG00000015033)	ENSAMXG00000039665	ENSAMXG00000033469	tbx1 (ENSAMXG00000020444) #22	gnb1l (ENSAMXG00000029845) #23	TXNRD2 (ENSAMXG00000033940) #25	pebp1 (ENSAMXG00000040321)	pebp1 (ENSAMXG00000042291)	TAOK3 (ENSAMXG00000013594)	suds3 (ENSAMXG00000013637)	ENSAMXG00000041901	ENSAMXG00000040668	ENSAMXG00000038719	hspb8 (ENSAMXG00000029753)	ENSAMXG00000029823	xbp1 (ENSAMXG00000038830)
Electric eel	MODERN SPECIES	568																tbx1 (ENSEEEG00000013061) #22	gnb1l (ENSEEEG00000013060) #23	TXNRD2 (ENSEEEG00000013057) #25	pebp1 (ENSEEEG00000013055)	TAOK3 (ENSEEEG00000012958)
Spotted gar	MODERN SPECIES	659	ppm1f (ENSLOCG00000002046)	TOP3B (ENSLOCG00000002058)	ENSLOCG00000002076	sdf2l1 (ENSLOCG00000002092)	ydjc (ENSLOCG00000002105)	ube2l3a (ENSLOCG00000002117)	ENSLOCG00000002127	ENSLOCG00000002138	hic2 (ENSLOCG00000002169)	pi4kaa (ENSLOCG00000002180)	serpind1 (ENSLOCG00000002284)	snap29 (ENSLOCG00000002299)	ENSLOCG00000002314	slc25a1b (ENSLOCG00000002325) #12	ENSLOCG00000002354 #13	tbx1 (ENSLOCG00000002370) #22	gnb1l (ENSLOCG00000002390) #23	TXNRD2 (ENSLOCG00000002405) #25	arvcfb (ENSLOCG00000002429) #27	tango2 (ENSLOCG00000002476) #28	dgcr8 (ENSLOCG00000002491) #29	trmt2a (ENSLOCG00000002517) #30	ranbp1 (ENSLOCG00000002540)	zdhhc8b (ENSLOCG00000002575) #32	pgam5 (ENSLOCG00000002606)	ankle2 (ENSLOCG00000002623)	golga3 (ENSLOCG00000002643)	ENSLOCG00000002672	ENSLOCG00000002686	chfr (ENSLOCG00000002699)	ENSLOCG00000002713
Reedfish	MODERN SPECIES	9	ypel1 (ENSECRG00000019803)	mapk1 (ENSECRG00000019848)	ppm1f (ENSECRG00000020068)	TOP3B (ENSECRG00000020109)	ENSECRG00000020175	sdf2l1 (ENSECRG00000020190)	ydjc (ENSECRG00000020206)	ube2l3a (ENSECRG00000020240)	hic2 (ENSECRG00000020263)	pi4kaa (ENSECRG00000020451)	serpind1 (ENSECRG00000020897)	snap29 (ENSECRG00000020914)	ENSECRG00000020933	slc25a1b (ENSECRG00000020955) #12	CLTCL1 (ENSECRG00000021008) #13	tbx1 (ENSECRG00000021088) #22	gnb1l (ENSECRG00000021112) #23	TXNRD2 (ENSECRG00000021130) #25	arvcfb (ENSECRG00000021174) #27	tango2 (ENSECRG00000021282) #28	dgcr8 (ENSECRG00000021304) #29	trmt2a (ENSECRG00000021324) #30	ENSECRG00000021344	ranbp1 (ENSECRG00000021359)	zdhhc8b (ENSECRG00000021394) #32	pgam5 (ENSECRG00000021408)	ankle2 (ENSECRG00000021441)	golga3 (ENSECRG00000021512)	chfr (ENSECRG00000021619)	ENSECRG00000021638	GALNT9 (ENSECRG00000021661)