Mammalia	ANCESTRAL SPECIES	89										ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000154022.b	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Theria	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000153385.b.a.b	ENSGT00940000161157	ENSGT00940000160381
Eutheria	ANCESTRAL SPECIES	9	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Primates	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Simiiformes	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.b ##30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Cebidae	ANCESTRAL SPECIES	5	ENSGT00730000111329.k.a	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.b ##30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Marmoset	MODERN SPECIES	16	LEMD2 (ENSCJAG00000012200) #7	IP6K3 (ENSCJAG00000044270) #8	UQCC2 (ENSCJAG00000012180) #9	ENSCJAG00000072978 #10	ITPR3 (ENSCJAG00000012111) #11	ENSCJAG00000016047 #12	ENSCJAG00000084010 #13	ENSCJAG00000084888 #14	ZBTB9 (ENSCJAG00000021692) #15	SYNGAP1 (ENSCJAG00000021691) #16	CUTA (ENSCJAG00000021690) #17	PHF1 (ENSCJAG00000021684) #18	KIFC1 (ENSCJAG00000021681) #19	SMIM40 (ENSCJAG00000052899) #20	DAXX (ENSCJAG00000021679) #21	ZBTB22 (ENSCJAG00000021676) #22	TAPBP (ENSCJAG00000021675) #23	RGL2 (ENSCJAG00000021668) #24	PFDN6 (ENSCJAG00000021665) #25	WDR46 (ENSCJAG00000021659) #26	B3GALT4 (ENSCJAG00000043225) #27	ENSCJAG00000021650 #28	VPS52 (ENSCJAG00000021644) #29	RING1 (ENSCJAG00000081691) #30	ENSCJAG00000021632 #31	SLC39A7 (ENSCJAG00000021622) #32	RXRB (ENSCJAG00000021619) #33	COL11A2 (ENSCJAG00000021577) #34	HLA-DPB1 (ENSCJAG00000021575) #35	HLA-DPA1 (ENSCJAG00000057301) #36	HLA-DOA (ENSCJAG00000021571) #37
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00390000011871	ENSGT00730000111329.k.a	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.b ##30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b.lc
Bolivian squirrel monkey	MODERN SPECIES	49	NUDT3 (ENSSBOG00000022644)	SMIM29 (ENSSBOG00000030537)	HMGA1 (ENSSBOG00000000498)	GRM4 (ENSSBOG00000020919)	MLN (ENSSBOG00000028942)	ENSSBOG00000021386 #7	IP6K3 (ENSSBOG00000034249) #8	UQCC2 (ENSSBOG00000030900) #9	ITPR3 (ENSSBOG00000021882) #11	ZBTB9 (ENSSBOG00000014339) #15	SYNGAP1 (ENSSBOG00000036152) #16	CUTA (ENSSBOG00000033274) #17	PHF1 (ENSSBOG00000024315) #18	KIFC1 (ENSSBOG00000023255) #19	DAXX (ENSSBOG00000022990) #21	ZBTB22 (ENSSBOG00000018285) #22	TAPBP (ENSSBOG00000031122) #23	RGL2 (ENSSBOG00000031644) #24	PFDN6 (ENSSBOG00000034801) #25	WDR46 (ENSSBOG00000032568) #26	ENSSBOG00000034369 ##28	VPS52 (ENSSBOG00000034931) #29	ENSSBOG00000021715 ##30	HSD17B8 (ENSSBOG00000033905) #31	SLC39A7 (ENSSBOG00000027575) #32	RXRB (ENSSBOG00000028234) #33	COL11A2 (ENSSBOG00000030814) #34	HLA-DPB1 (ENSSBOG00000023374) #35	HLA-DPA1 (ENSSBOG00000026139) #36	HLA-DOA (ENSSBOG00000022957) #37	ENSSBOG00000033070
Capuchin	MODERN SPECIES	24	ENSCCAG00000033605	ENSCCAG00000024304	GRM4 (ENSCCAG00000024807)	MLN (ENSCCAG00000025534)	LEMD2 (ENSCCAG00000007623) #7	IP6K3 (ENSCCAG00000037337) #8	UQCC2 (ENSCCAG00000028094) #9	ITPR3 (ENSCCAG00000029014) #11	BAK1 (ENSCCAG00000037937) #12	ZBTB9 (ENSCCAG00000001949) #15	SYNGAP1 (ENSCCAG00000037957) #16	CUTA (ENSCCAG00000037942) #17	PHF1 (ENSCCAG00000018362) #18	KIFC1 (ENSCCAG00000020819) #19	ENSCCAG00000035320	ZBTB22 (ENSCCAG00000019414) #22	TAPBP (ENSCCAG00000030579) #23	RGL2 (ENSCCAG00000036457) #24	PFDN6 (ENSCCAG00000027108) #25	WDR46 (ENSCCAG00000029352) #26	RPS18 (ENSCCAG00000023639) #28	VPS52 (ENSCCAG00000029806) #29	RING1 (ENSCCAG00000020672) ##30	HSD17B8 (ENSCCAG00000034063) #31	SLC39A7 (ENSCCAG00000021481) #32	RXRB (ENSCCAG00000015878) #33	COL11A2 (ENSCCAG00000021086) #34	HLA-DPB1 (ENSCCAG00000036491) #35	HLA-DPA1 (ENSCCAG00000035048) #36	HLA-DOA (ENSCCAG00000024211) #37	ENSCCAG00000016930
Mas night monkey	MODERN SPECIES	1007	ENSANAG00000024318	GRM4 (ENSANAG00000036603)	MLN (ENSANAG00000026306)	LEMD2 (ENSANAG00000021561) #7	IP6K3 (ENSANAG00000036812) #8	UQCC2 (ENSANAG00000036236) #9	ENSANAG00000035534	ITPR3 (ENSANAG00000037391) #11	BAK1 (ENSANAG00000026323) #12	ZBTB9 (ENSANAG00000015631) #15	SYNGAP1 (ENSANAG00000019519) #16	CUTA (ENSANAG00000034018) #17	PHF1 (ENSANAG00000030035) #18	KIFC1 (ENSANAG00000021191) #19	DAXX (ENSANAG00000029566) #21	ZBTB22 (ENSANAG00000016363) #22	TAPBP (ENSANAG00000021536) #23	RGL2 (ENSANAG00000030840) #24	ENSANAG00000024231 #25	WDR46 (ENSANAG00000037125) #26	ENSANAG00000037361 #28	VPS52 (ENSANAG00000024474) #29	RING1 (ENSANAG00000038392) ##30	HSD17B8 (ENSANAG00000020567) #31	SLC39A7 (ENSANAG00000029358) #32	RXRB (ENSANAG00000036498) #33	COL11A2 (ENSANAG00000026780) #34	HLA-DPB1 (ENSANAG00000038389) #35
Catarrhini	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Hominoidea	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Hominidae	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Pan	ANCESTRAL SPECIES	5	ENSGT00730000111329.l.a.b	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Bonobo	MODERN SPECIES	19	MLN (ENSPPAG00000033007)	ENSPPAG00000035724 #7	IP6K3 (ENSPPAG00000032091) #8	UQCC2 (ENSPPAG00000039893) #9	ENSPPAG00000024853	ITPR3 (ENSPPAG00000040289) #11	BAK1 (ENSPPAG00000029631) #12	ZBTB9 (ENSPPAG00000016279) #15	SYNGAP1 (ENSPPAG00000036420) #16	CUTA (ENSPPAG00000037422) #17	PHF1 (ENSPPAG00000034810) #18	KIFC1 (ENSPPAG00000042032) #19	ENSPPAG00000039323	ENSPPAG00000028889	DAXX (ENSPPAG00000028039) #21	ZBTB22 (ENSPPAG00000004427) #22	TAPBP (ENSPPAG00000024524) #23	RGL2 (ENSPPAG00000030717) #24	PFDN6 (ENSPPAG00000026096) #25	WDR46 (ENSPPAG00000029606) #26	B3GALT4 (ENSPPAG00000040442) #27	RPS18 (ENSPPAG00000037432) #28	VPS52 (ENSPPAG00000039628) #29	RING1 (ENSPPAG00000001290) #30	HSD17B8 (ENSPPAG00000032286) #31	SLC39A7 (ENSPPAG00000028225) #32	RXRB (ENSPPAG00000038590) #33	COL11A2 (ENSPPAG00000013099) #34	HLA-DPB1 (ENSPPAG00000041449) #35	HLA-DPA1 (ENSPPAG00000031863) #36	HLA-DOA (ENSPPAG00000036361) #37
Chimpanzee	MODERN SPECIES	19	HMGA1 (ENSPTRG00000040884)	GRM4 (ENSPTRG00000018059)	MLN (ENSPTRG00000018058)	LEMD2 (ENSPTRG00000018057) #7	IP6K3 (ENSPTRG00000018056) #8	UQCC2 (ENSPTRG00000018055) #9	ENSPTRG00000044431	ITPR3 (ENSPTRG00000018054) #11	BAK1 (ENSPTRG00000018053) #12	ZBTB9 (ENSPTRG00000018052) #15	SYNGAP1 (ENSPTRG00000033928) #16	CUTA (ENSPTRG00000018050) #17	PHF1 (ENSPTRG00000018049) #18	KIFC1 (ENSPTRG00000018047) #19	DAXX (ENSPTRG00000018045) #21	ZBTB22 (ENSPTRG00000018044) #22	TAPBP (ENSPTRG00000018043) #23	RGL2 (ENSPTRG00000018042) #24	PFDN6 (ENSPTRG00000018041) #25	WDR46 (ENSPTRG00000018040) #26	RPS18 (ENSPTRG00000018039) #28	VPS52 (ENSPTRG00000018038) #29	RING1 (ENSPTRG00000018037) #30	HSD17B8 (ENSPTRG00000018036) #31	SLC39A7 (ENSPTRG00000018035) #32	RXRB (ENSPTRG00000018034) #33	COL11A2 (ENSPTRG00000018033) #34	HLA-DPB1 (ENSPTRG00000018030) #35	HLA-DPA1 (ENSPTRG00000018029) #36	HLA-DOA (ENSPTRG00000018028) #37	ENSPTRG00000018027
Human	MODERN SPECIES	18	HMGA1 (ENSG00000137309)	GRM4 (ENSG00000124493)	MLN (ENSG00000096395)	LEMD2 (ENSG00000161904) #7	IP6K3 (ENSG00000161896) #8	UQCC2 (ENSG00000137288) #9	ITPR3 (ENSG00000096433) #11	BAK1 (ENSG00000030110) #12	ZBTB9 (ENSG00000213588) #15	SYNGAP1 (ENSG00000197283) #16	CUTA (ENSG00000112514) #17	PHF1 (ENSG00000112511) #18	KIFC1 (ENSG00000237649) #19	SMIM40 (ENSG00000286920) #20	DAXX (ENSG00000204209) #21	ZBTB22 (ENSG00000236104) #22	TAPBP (ENSG00000231925) #23	RGL2 (ENSG00000237441) #24	PFDN6 (ENSG00000204220) #25	WDR46 (ENSG00000227057) #26	B3GALT4 (ENSG00000235863) #27	RPS18 (ENSG00000231500) #28	VPS52 (ENSG00000223501) #29	RING1 (ENSG00000204227) #30	HSD17B8 (ENSG00000204228) #31	SLC39A7 (ENSG00000112473) #32	RXRB (ENSG00000204231) #33	COL11A2 (ENSG00000204248) #34	HLA-DPB1 (ENSG00000223865) #35	HLA-DPA1 (ENSG00000231389) #36	HLA-DOA (ENSG00000204252) #37
Gorilla	MODERN SPECIES	19	LEMD2 (ENSGGOG00000008126) #7	IP6K3 (ENSGGOG00000016288) #8	UQCC2 (ENSGGOG00000043321) #9	ENSGGOG00000023740	ITPR3 (ENSGGOG00000016235) #11	BAK1 (ENSGGOG00000022462) #12	ENSGGOG00000025210	ZBTB9 (ENSGGOG00000040099) #15	SYNGAP1 (ENSGGOG00000009923) #16	CUTA (ENSGGOG00000000265) #17	PHF1 (ENSGGOG00000000264) #18	KIFC1 (ENSGGOG00000000261) #19	ENSGGOG00000009233	ENSGGOG00000024257	DAXX (ENSGGOG00000006601) #21	ZBTB22 (ENSGGOG00000006597) #22	TAPBP (ENSGGOG00000006593) #23	RGL2 (ENSGGOG00000006585) #24	PFDN6 (ENSGGOG00000006583) #25	WDR46 (ENSGGOG00000006578) #26	RPS18 (ENSGGOG00000006571) #28	VPS52 (ENSGGOG00000006565) #29	RING1 (ENSGGOG00000009842) #30	HSD17B8 (ENSGGOG00000009838) #31	SLC39A7 (ENSGGOG00000009830) #32	RXRB (ENSGGOG00000009823) #33	COL11A2 (ENSGGOG00000009799) #34	HLA-DPB1 (ENSGGOG00000013630) #35	HLA-DPA1 (ENSGGOG00000013625) #36	HLA-DOA (ENSGGOG00000010653) #37	ENSGGOG00000005838
Orangutan	MODERN SPECIES	19	MLN (ENSPPYG00000016511)	LEMD2 (ENSPPYG00000016510) #7	IP6K3 (ENSPPYG00000016509) #8	ENSPPYG00000016508 #9	ENSPPYG00000016507	ITPR3 (ENSPPYG00000016504) #11	BAK1 (ENSPPYG00000016502) #12	ZBTB9 (ENSPPYG00000016501) #15	SYNGAP1 (ENSPPYG00000016500) #16	CUTA (ENSPPYG00000016499) #17	PHF1 (ENSPPYG00000016498) #18	KIFC1 (ENSPPYG00000016497) #19	ENSPPYG00000016496	SMIM40 (ENSPPYG00000031014) #20	DAXX (ENSPPYG00000017250) #21	ZBTB22 (ENSPPYG00000017249) #22	TAPBP (ENSPPYG00000017248) #23	RGL2 (ENSPPYG00000017247) #24	PFDN6 (ENSPPYG00000038269) #25	WDR46 (ENSPPYG00000017245) #26	B3GALT4 (ENSPPYG00000017244) #27	ENSPPYG00000025953 ##28	VPS52 (ENSPPYG00000017243) #29	RING1 (ENSPPYG00000017242) #30	HSD17B8 (ENSPPYG00000017241) #31	SLC39A7 (ENSPPYG00000017240) #32	RXRB (ENSPPYG00000017239) #33	COL11A2 (ENSPPYG00000017238) #34	HLA-DPA1 (ENSPPYG00000017229) #36	ENSPPYG00000029571 #35	HLA-DOA (ENSPPYG00000016495) #37
Gibbon	MODERN SPECIES	10	ENSNLEG00000033901	SMIM29 (ENSNLEG00000032266)	HMGA1 (ENSNLEG00000031539)	ENSNLEG00000034916	GRM4 (ENSNLEG00000008487)	MLN (ENSNLEG00000008478)	ENSNLEG00000008472 #7	IP6K3 (ENSNLEG00000008448) #8	UQCC2 (ENSNLEG00000035324) #9	ITPR3 (ENSNLEG00000008373) #11	BAK1 (ENSNLEG00000028170) #12	ZBTB9 (ENSNLEG00000008348) #15	ENSNLEG00000033973 #16	PHF1 (ENSNLEG00000008320) #18	KIFC1 (ENSNLEG00000008288) #19	ZBTB22 (ENSNLEG00000030172) #22	ENSNLEG00000006852 #23	RGL2 (ENSNLEG00000006847) #24	PFDN6 (ENSNLEG00000034338) #25	ENSNLEG00000006842 #26	B3GALT4 (ENSNLEG00000006841) #27	RPS18 (ENSNLEG00000006840) #28	VPS52 (ENSNLEG00000006832) #29	RING1 (ENSNLEG00000006830) #30	HSD17B8 (ENSNLEG00000006824) #31	SLC39A7 (ENSNLEG00000006815) #32	RXRB (ENSNLEG00000006809) #33	ENSNLEG00000030023 #34	HLA-DPB1 (ENSNLEG00000006801) #35	HLA-DPA1 (ENSNLEG00000034417) #36	ENSNLEG00000031675 #37
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00730000111329.l	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00910000146977	ENSGT00510000048041.p #9	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00730000111329.l	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00910000147736	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Macaca	ANCESTRAL SPECIES	9	ENSGT00730000111329.l	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489.f	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00910000147736	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.m.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498.k #36
Pig-tailed macaque	MODERN SPECIES	528	ENSMNEG00000005671	GRM4 (ENSMNEG00000044576)	MLN (ENSMNEG00000032540)	LEMD2 (ENSMNEG00000038123) #7	IP6K3 (ENSMNEG00000038698) #8	ENSMNEG00000029597 #9	ENSMNEG00000041642	ITPR3 (ENSMNEG00000036557) #11	BAK1 (ENSMNEG00000029718) #12	ZBTB9 (ENSMNEG00000004451) #15	SYNGAP1 (ENSMNEG00000038386) #16	CUTA (ENSMNEG00000037602) #17	PHF1 (ENSMNEG00000039621) #18	KIFC1 (ENSMNEG00000034876) #19	DAXX (ENSMNEG00000040481) #21	ZBTB22 (ENSMNEG00000016441) #22	TAPBP (ENSMNEG00000029255) #23	ENSMNEG00000013214	RGL2 (ENSMNEG00000039053) #24	PFDN6 (ENSMNEG00000030272) #25	WDR46 (ENSMNEG00000034609) #26	ENSMNEG00000045500 #28	VPS52 (ENSMNEG00000038741) #29	RING1 (ENSMNEG00000042339) #30	HSD17B8 (ENSMNEG00000036244) #31	SLC39A7 (ENSMNEG00000034647) #32	RXRB (ENSMNEG00000034252) #33	COL11A2 (ENSMNEG00000022236) #34	ENSMNEG00000010287 #35	HLA-DPB1 (ENSMNEG00000029725) #35	HLA-DPA1 (ENSMNEG00000040889) #36
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00390000000489.f	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00940000157078 #11	ENSGT00910000146977	ENSGT00390000015789.c.a.b	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00530000064449.E.l	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.m.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160076 #32	ENSGT00940000160668 #31	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498.k #36	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b.qc.b
Rhesus	MODERN SPECIES	14	LEMD2 (ENSMMUG00000021734) #7	IP6K3 (ENSMMUG00000045656) #8	UQCC2 (ENSMMUG00000020703) #9	ITPR3 (ENSMMUG00000047729) #11	ENSMMUG00000058175	ENSMMUG00000052902	ENSMMUG00000019505	BAK1 (ENSMMUG00000063304) #12	ZBTB9 (ENSMMUG00000029765) #15	SYNGAP1 (ENSMMUG00000010659) #16	PHF1 (ENSMMUG00000010649) #18	CUTA (ENSMMUG00000010658) #17	KIFC1 (ENSMMUG00000007477) #19	ENSMMUG00000051253	DAXX (ENSMMUG00000004287)	ZBTB22 (ENSMMUG00000003876) #22	TAPBP (ENSMMUG00000003875) #23	RGL2 (ENSMMUG00000003872) #24	PFDN6 (ENSMMUG00000003871) #25	WDR46 (ENSMMUG00000003869) #26	B3GALT4 (ENSMMUG00000064507) #27	VPS52 (ENSMMUG00000003864) #29	ENSMMUG00000003867 #28	RING1 (ENSMMUG00000003863) #30	SLC39A7 (ENSMMUG00000003859) #32	HSD17B8 (ENSMMUG00000003861) #31	RXRB (ENSMMUG00000003858) #33	COL11A2 (ENSMMUG00000003850) #34	ENSMMUG00000019371 #36	ENSMMUG00000041095	MAMU-DOA (ENSMMUG00000015734) #37
Crab-eating macaque	MODERN SPECIES	14	MLN (ENSMFAG00000032195)	ENSMFAG00000001775 #7	IP6K3 (ENSMFAG00000036096) #8	UQCC2 (ENSMFAG00000039620) #9	ITPR3 (ENSMFAG00000039709) #11	ENSMFAG00000037076	EIF1 (ENSMFAG00000046072)	BAK1 (ENSMFAG00000029410) #12	ZBTB9 (ENSMFAG00000025074) #15	SYNGAP1 (ENSMFAG00000041047) #16	CUTA (ENSMFAG00000044039) #17	PHF1 (ENSMFAG00000040302) #18	KIFC1 (ENSMFAG00000036107) #19	ENSMFAG00000058856	DAXX (ENSMFAG00000038728) #21	ZBTB22 (ENSMFAG00000011344) #22	TAPBP (ENSMFAG00000000942) #23	RGL2 (ENSMFAG00000039597) #24	PFDN6 (ENSMFAG00000041216) #25	WDR46 (ENSMFAG00000000475) #26	B3GALT4 (ENSMFAG00000041942) #27	RPS18 (ENSMFAG00000032199) #28	COL11A2 (ENSMFAG00000017491) #34	RING1 (ENSMFAG00000002610) #30	SLC39A7 (ENSMFAG00000038848) #32	HSD17B8 (ENSMFAG00000037332) #31	RXRB (ENSMFAG00000003583) #33	HLA-DOA (ENSMFAG00000058905) #37	BRD2 (ENSMFAG00000037520)	ENSMFAG00000060572	HLA-DMA (ENSMFAG00000042109)
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00730000111329.l	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00910000147736	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498.m #36
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00730000111329.l	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041.o #9	ENSGT00910000146977	ENSGT00940000157078 #11	ENSGT01090000260100.A.i.a #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00910000147736	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00390000012691.c.b.n #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34
Sooty mangabey	MODERN SPECIES	97	ENSCATG00000042051	GRM4 (ENSCATG00000022825)	MLN (ENSCATG00000041664)	LEMD2 (ENSCATG00000005671) #7	IP6K3 (ENSCATG00000036617) #8	UQCC2 (ENSCATG00000043597) #9	ITPR3 (ENSCATG00000037656) #11	ENSCATG00000036623	BAK1 (ENSCATG00000038803) #12	ZBTB9 (ENSCATG00000022705) #15	SYNGAP1 (ENSCATG00000038034) #16	PHF1 (ENSCATG00000044603) #18	CUTA (ENSCATG00000032989) #17	KIFC1 (ENSCATG00000020793) #19	DAXX (ENSCATG00000036824) #21	ZBTB22 (ENSCATG00000001104) #22	TAPBP (ENSCATG00000025425) #23	RGL2 (ENSCATG00000031205) #24	PFDN6 (ENSCATG00000032725) #25	WDR46 (ENSCATG00000029635) #26	ENSCATG00000016639 #28	VPS52 (ENSCATG00000042050) #29	RING1 (ENSCATG00000027218) #30	HSD17B8 (ENSCATG00000041786) #31	SLC39A7 (ENSCATG00000027503) #32	RXRB (ENSCATG00000029432) #33	COL11A2 (ENSCATG00000027998) #34	ENSCATG00000040357 #35
Drill	MODERN SPECIES	941	ENSMLEG00000041073	ENSMLEG00000042857	GRM4 (ENSMLEG00000039397)	MLN (ENSMLEG00000039698)	IP6K3 (ENSMLEG00000039478) #8	ENSMLEG00000012668 #9	ENSMLEG00000009976	ITPR3 (ENSMLEG00000034958) #11	BAK1 (ENSMLEG00000033537) #12	ZBTB9 (ENSMLEG00000011741) #15	SYNGAP1 (ENSMLEG00000029147) #16	CUTA (ENSMLEG00000022508) #17	PHF1 (ENSMLEG00000040290) #18	KIFC1 (ENSMLEG00000030563) #19	DAXX (ENSMLEG00000034686) #21	ZBTB22 (ENSMLEG00000005786) #22	TAPBP (ENSMLEG00000026095) #23	ENSMLEG00000024250	RGL2 (ENSMLEG00000038903) #24	PFDN6 (ENSMLEG00000033252) #25	WDR46 (ENSMLEG00000038535) #26	RPS18 (ENSMLEG00000043794) #28	VPS52 (ENSMLEG00000032279) #29
Olive baboon	MODERN SPECIES	16	LEMD2 (ENSPANG00000017101) #7	IP6K3 (ENSPANG00000037017) #8	UQCC2 (ENSPANG00000010760) #9	ENSPANG00000007623	ITPR3 (ENSPANG00000017411) #11	BAK1 (ENSPANG00000031258) #12	ENSPANG00000039481	ZBTB9 (ENSPANG00000012823) #15	SYNGAP1 (ENSPANG00000014561) #16	CUTA (ENSPANG00000022347) #17	PHF1 (ENSPANG00000009191) #18	KIFC1 (ENSPANG00000020271) #19	ENSPANG00000038941	SMIM40 (ENSPANG00000047345) #20	DAXX (ENSPANG00000020874) #21	ZBTB22 (ENSPANG00000007019) #22	TAPBP (ENSPANG00000022348) #23	RGL2 (ENSPANG00000023572) #24	PFDN6 (ENSPANG00000025458) #25	WDR46 (ENSPANG00000009193) #26	B3GALT4 (ENSPANG00000040674) #27	RPS18 (ENSPANG00000029306) #28	VPS52 (ENSPANG00000026491) #29	RING1 (ENSPANG00000023635) #30	HSD17B8 (ENSPANG00000023634) #31	SLC39A7 (ENSPANG00000023633) #32	RXRB (ENSPANG00000018527) #33	COL11A2 (ENSPANG00000009194) #34	HLA-DPB1 (ENSPANG00000005764) #35	HLA-DPA1 (ENSPANG00000018967) #36	HLA-DOA (ENSPANG00000031879) #37
Vervet Monkey	MODERN SPECIES	8	ENSCSAG00000009778	HMGA1 (ENSCSAG00000009775)	GRM4 (ENSCSAG00000009763)	MLN (ENSCSAG00000009706)	LEMD2 (ENSCSAG00000009695) #7	IP6K3 (ENSCSAG00000009672) #8	UQCC2 (ENSCSAG00000009662) #9	ITPR3 (ENSCSAG00000009649) #11	BAK1 (ENSCSAG00000009617) #12	ZBTB9 (ENSCSAG00000019306) #15	SYNGAP1 (ENSCSAG00000009596) #16	CUTA (ENSCSAG00000009582) #17	PHF1 (ENSCSAG00000009589) #18	KIFC1 (ENSCSAG00000009576) #19	DAXX (ENSCSAG00000009571) #21	ZBTB22 (ENSCSAG00000019307) #22	TAPBP (ENSCSAG00000009568) #23	RGL2 (ENSCSAG00000009562) #24	PFDN6 (ENSCSAG00000009556) #25	WDR46 (ENSCSAG00000009552) #26	B3GALT4 (ENSCSAG00000019308) #27	VPS52 (ENSCSAG00000009546) #29	RING1 (ENSCSAG00000009538) #30	HSD17B8 (ENSCSAG00000009530) #31	SLC39A7 (ENSCSAG00000009519) #32	RXRB (ENSCSAG00000009510) #33	COL11A2 (ENSCSAG00000009488) #34	ENSCSAG00000009461 #35	ENSCSAG00000009455 #36	HLA-DOA (ENSCSAG00000009452) #37	BRD2 (ENSCSAG00000009445)
Rhinopithecus	ANCESTRAL SPECIES	31	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00910000146977	ENSGT01090000260100.A.j #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00940000168716	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00390000012691.c.b.m.a #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Golden snub-nosed monkey	MODERN SPECIES	3223											SYNGAP1 (ENSRROG00000045637) #16	CUTA (ENSRROG00000006981) #17	PHF1 (ENSRROG00000040543) #18	KIFC1 (ENSRROG00000045537) #19	ENSRROG00000032956	ZBTB22 (ENSRROG00000020672) #22	TAPBP (ENSRROG00000038715) #23	RGL2 (ENSRROG00000005813) #24	PFDN6 (ENSRROG00000043403) #25	WDR46 (ENSRROG00000020171) #26	ENSRROG00000044629 #28	VPS52 (ENSRROG00000039513) #29	RING1 (ENSRROG00000033308) #30	HSD17B8 (ENSRROG00000002444) #31	SLC39A7 (ENSRROG00000032416) #32	RXRB (ENSRROG00000041152) #33	COL11A2 (ENSRROG00000044037) #34	HLA-DPB1 (ENSRROG00000036288) #35	HLA-DPA1 (ENSRROG00000037394) #36
Black snub-nosed monkey	MODERN SPECIES	952													CYP2A26P (ENSRBIG00000043733)	CYP2F1 (ENSRBIG00000042105)	DAXX (ENSRBIG00000030811) #21	ZBTB22 (ENSRBIG00000021773) #22	TAPBP (ENSRBIG00000040094) #23	ENSRBIG00000031512	PFDN6 (ENSRBIG00000012271) #25	WDR46 (ENSRBIG00000029240) #26	ENSRBIG00000031265 #28	VPS52 (ENSRBIG00000035231) #29	RING1 (ENSRBIG00000033357) #30	HSD17B8 (ENSRBIG00000027882) #31	SLC39A7 (ENSRBIG00000031767) #32	RXRB (ENSRBIG00000039448) #33	COL11A2 (ENSRBIG00000028179) #34	ENSRBIG00000033755 #35	HLA-DPB1 (ENSRBIG00000040381) #35	HLA-DPA1 (ENSRBIG00000033377) #36
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00390000008099.u.b	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34
Greater bamboo lemur	MODERN SPECIES	466										ZBTB9 (ENSPSMG00000017843) #15	SYNGAP1 (ENSPSMG00000018077) #16	CUTA (ENSPSMG00000018247) #17	PHF1 (ENSPSMG00000018350) #18	SMIM40 (ENSPSMG00000018419) #20	DAXX (ENSPSMG00000018432) #21	ZBTB22 (ENSPSMG00000018438) #22	TAPBP (ENSPSMG00000018532) #23	RGL2 (ENSPSMG00000018601) #24	PFDN6 (ENSPSMG00000018609) #25	WDR46 (ENSPSMG00000018660) #26	ENSPSMG00000018714 ##28	VPS52 (ENSPSMG00000018774) #29	ENSPSMG00000018863	RING1 (ENSPSMG00000018876) #30	HSD17B8 (ENSPSMG00000018895) #31	SLC39A7 (ENSPSMG00000018930) #32	RXRB (ENSPSMG00000018970) #33	COL11A2 (ENSPSMG00000019150) #34
Bushbaby	MODERN SPECIES	146	ENSOGAG00000025948	GRM4 (ENSOGAG00000029055)	MLN (ENSOGAG00000015614)	LEMD2 (ENSOGAG00000030156) #7	IP6K3 (ENSOGAG00000015606) #8	UQCC2 (ENSOGAG00000015604) #9	ITPR3 (ENSOGAG00000015581) #11	ENSOGAG00000015578	BAK1 (ENSOGAG00000015573) #12	ZBTB9 (ENSOGAG00000026628) #15	SYNGAP1 (ENSOGAG00000015560) #16	ENSOGAG00000015556 #17	PHF1 (ENSOGAG00000015551) #18	KIFC1 (ENSOGAG00000013028) #19	ENSOGAG00000004002 #21	ZBTB22 (ENSOGAG00000033956) #22	TAPBP (ENSOGAG00000003999) #23	RGL2 (ENSOGAG00000003996) #24	ENSOGAG00000028341 #25	WDR46 (ENSOGAG00000006230) #26	B3GALT4 (ENSOGAG00000006228) #27	RPS18 (ENSOGAG00000006225) #28	VPS52 (ENSOGAG00000006222) #29	RING1 (ENSOGAG00000006220) #30	HSD17B8 (ENSOGAG00000006214) #31	SLC39A7 (ENSOGAG00000030006) #32	RXRB (ENSOGAG00000011689) #33	COL11A2 (ENSOGAG00000025975) #34	ENSOGAG00000034269	ENSOGAG00000016138 #35	HLA-DPA1 (ENSOGAG00000006476) #36
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Glires	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Sciuridae	ANCESTRAL SPECIES	1	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Marmotini	ANCESTRAL SPECIES	18	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Squirrel	MODERN SPECIES	76	SMIM29 (ENSSTOG00000009996)	HMGA1 (ENSSTOG00000016559)	GRM4 (ENSSTOG00000021639)	LEMD2 (ENSSTOG00000000860) #7	IP6K3 (ENSSTOG00000021218) #8	UQCC2 (ENSSTOG00000000855) #9	ITPR3 (ENSSTOG00000000825) #11	ENSSTOG00000023969	BAK1 (ENSSTOG00000002492) #12	ZBTB9 (ENSSTOG00000028789) #15	SYNGAP1 (ENSSTOG00000002482) #16	CUTA (ENSSTOG00000002474) #17	PHF1 (ENSSTOG00000002459) #18	KIFC1 (ENSSTOG00000002449) #19	DAXX (ENSSTOG00000002441) #21	ZBTB22 (ENSSTOG00000021763) #22	TAPBP (ENSSTOG00000025004) #23	RGL2 (ENSSTOG00000024728) #24	PFDN6 (ENSSTOG00000027428) #25	WDR46 (ENSSTOG00000002433) #26	B3GALT4 (ENSSTOG00000024877) #27	ENSSTOG00000002417 ##28	VPS52 (ENSSTOG00000002397) #29	RING1 (ENSSTOG00000026166) #30	HSD17B8 (ENSSTOG00000020853) #31	SLC39A7 (ENSSTOG00000014304) #32	RXRB (ENSSTOG00000027099) #33	COL11A2 (ENSSTOG00000003578) #34	HLA-DPB1 (ENSSTOG00000003567) #35	HLA-DPA1 (ENSSTOG00000003558) #36	HLA-DOA (ENSSTOG00000010820) #37
Arctic ground squirrel	MODERN SPECIES	25	MLN (ENSUPAG00010014101)	LEMD2 (ENSUPAG00010014087) #7	IP6K3 (ENSUPAG00010014072) #8	UQCC2 (ENSUPAG00010014062) #9	ITPR3 (ENSUPAG00010013963) #11	ENSUPAG00010013955	BAK1 (ENSUPAG00010013946) #12	ENSUPAG00010013936	ZBTB9 (ENSUPAG00010013935) #15	SYNGAP1 (ENSUPAG00010013762) #16	CUTA (ENSUPAG00010013747) #17	PHF1 (ENSUPAG00010013695) #18	KIFC1 (ENSUPAG00010013621) #19	SMIM40 (ENSUPAG00010013617) #20	DAXX (ENSUPAG00010013614) #21	ZBTB22 (ENSUPAG00010013610) #22	TAPBP (ENSUPAG00010013596) #23	RGL2 (ENSUPAG00010013583) #24	PFDN6 (ENSUPAG00010013562) #25	WDR46 (ENSUPAG00010013516) #26	B3GALT4 (ENSUPAG00010013513) #27	ENSUPAG00010013506 ##28	VPS52 (ENSUPAG00010013433) #29	RING1 (ENSUPAG00010013424) #30	HSD17B8 (ENSUPAG00010013412) #31	SLC39A7 (ENSUPAG00010013405) #32	RXRB (ENSUPAG00010013376) #33	COL11A2 (ENSUPAG00010012591) #34	HLA-DPA1 (ENSUPAG00010012558) #36	HLA-DPB1 (ENSUPAG00010005123) #35	HLA-DOA (ENSUPAG00010005068) #37
Eurasian red squirrel	MODERN SPECIES	16	LEMD2 (ENSSVLG00005010376) #7	IP6K3 (ENSSVLG00005010422) #8	UQCC2 (ENSSVLG00005010471) #9	ITPR3 (ENSSVLG00005010544) #11	ENSSVLG00005010600 #11	ENSSVLG00005010672	ENSSVLG00005010748 #12	ENSSVLG00005004290	ZBTB9 (ENSSVLG00005004305) #15	SYNGAP1 (ENSSVLG00005004360) #16	CUTA (ENSSVLG00005004466) #17	PHF1 (ENSSVLG00005004509) #18	ENSSVLG00005004551 #19	SMIM40 (ENSSVLG00005004582) #20	DAXX (ENSSVLG00005004592) #21	ZBTB22 (ENSSVLG00005004608) #22	TAPBP (ENSSVLG00005004624) #23	RGL2 (ENSSVLG00005004647) #24	ENSSVLG00005004670 #25	WDR46 (ENSSVLG00005004694) #26	B3GALT4 (ENSSVLG00005004704) #27	RPS18 (ENSSVLG00005004721) #28	VPS52 (ENSSVLG00005004757) #29	ENSSVLG00005004778	RING1 (ENSSVLG00005004804) #30	HSD17B8 (ENSSVLG00005004902) #31	SLC39A7 (ENSSVLG00005004925) #32	RXRB (ENSSVLG00005004952) #33	COL11A2 (ENSSVLG00005005202) #34	HLA-DPB1 (ENSSVLG00005006269) #35	HLA-DPA1 (ENSSVLG00005006304) #36
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Naked mole-rat female	MODERN SPECIES	4	YIPF3 (ENSHGLG00000019245)	LRRC73 (ENSHGLG00000019162)	TJAP1 (ENSHGLG00000050716)	DLK2 (ENSHGLG00000017186)	ABCC10 (ENSHGLG00000017199)	ZNF318 (ENSHGLG00000017209)	CRIP3 (ENSHGLG00000017216)	SLC22A7 (ENSHGLG00000019228)	TTBK1 (ENSHGLG00000019189)	DNPH1 (ENSHGLG00000045212)	CUL9 (ENSHGLG00000019373)	ENSHGLG00000019183	ENSHGLG00000049441	ENSHGLG00000032903	ENSHGLG00000017195 #21	ZBTB22 (ENSHGLG00000017146) #22	TAPBP (ENSHGLG00000017138) #23	RGL2 (ENSHGLG00000017158) #24	PFDN6 (ENSHGLG00000017170) #25	WDR46 (ENSHGLG00000017190) #26	B3GALT4 (ENSHGLG00000046221) #27	VPS52 (ENSHGLG00000017226) #29	RING1 (ENSHGLG00000019474) #30	HSD17B8 (ENSHGLG00000019497) #31	SLC39A7 (ENSHGLG00000018434) #32	RXRB (ENSHGLG00000018456) #33	COL11A2 (ENSHGLG00000018531) #34	HLA-DPB1 (ENSHGLG00000019389) #35	HLA-DPA1 (ENSHGLG00000019266) #36	HLA-DOA (ENSHGLG00000019255) #37	BRD2 (ENSHGLG00000019334)
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Guinea pig	MODERN SPECIES	15	NUDT3 (ENSCPOG00000003929)	HMGA1 (ENSCPOG00000031062)	GRM4 (ENSCPOG00000000288)	MLN (ENSCPOG00000007949)	LEMD2 (ENSCPOG00000007946) #7	IP6K3 (ENSCPOG00000013261) #8	UQCC2 (ENSCPOG00000034353) #9	ITPR3 (ENSCPOG00000014107) #11	BAK1 (ENSCPOG00000000108) #12	ZBTB9 (ENSCPOG00000035179) #15	SYNGAP1 (ENSCPOG00000002979) #16	CUTA (ENSCPOG00000008762) #17	PHF1 (ENSCPOG00000008751) #18	KIFC1 (ENSCPOG00000010632) #19	DAXX (ENSCPOG00000006780) #21	ZBTB22 (ENSCPOG00000035676) #22	TAPBP (ENSCPOG00000024169) #23	RGL2 (ENSCPOG00000012737) #24	PFDN6 (ENSCPOG00000019520) #25	WDR46 (ENSCPOG00000012733) #26	B3GALT4 (ENSCPOG00000012731) #27	RPS18 (ENSCPOG00000019675) #28	VPS52 (ENSCPOG00000013947) #29	RING1 (ENSCPOG00000013943) #30	HSD17B8 (ENSCPOG00000013940) #31	SLC39A7 (ENSCPOG00000023790) #32	RXRB (ENSCPOG00000013936) #33	COL11A2 (ENSCPOG00000020466) #34	ENSCPOG00000035477 #36	ENSCPOG00000024142 #35	ENSCPOG00000032859 #35
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Kangaroo rat	MODERN SPECIES	519					Lemd2 (ENSDORG00000001464) #7	Ip6k3 (ENSDORG00000001462) #8	Uqcc2 (ENSDORG00000001460) #9	Itpr3 (ENSDORG00000001447) #11	Bak1 (ENSDORG00000023188) #12	Zbtb9 (ENSDORG00000003264) #15	Syngap1 (ENSDORG00000003262) #16	Cuta (ENSDORG00000003261) #17	Phf1 (ENSDORG00000003258) #18	ENSDORG00000003255 #19	Daxx (ENSDORG00000013838) #21	Zbtb22 (ENSDORG00000013837) #22	Tapbp (ENSDORG00000013835) #23	Rgl2 (ENSDORG00000013829) #24	ENSDORG00000013828 #25	Wdr46 (ENSDORG00000013827) #26	B3galt4 (ENSDORG00000013826) #27	ENSDORG00000013825 #28	Vps52 (ENSDORG00000013822) #29	Ring1 (ENSDORG00000013820) #30	Hsd17b8 (ENSDORG00000013819) #31	Slc39a7 (ENSDORG00000013818) #32	Rxrb (ENSDORG00000013816) #33	Col11a2 (ENSDORG00000013815) #34	ENSDORG00000024606 #35	ENSDORG00000004500 #36	H2-Oa (ENSDORG00000004499) #37
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Muroidea	ANCESTRAL SPECIES	15	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.f.a.b.b.b	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000164565	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29
Golden Hamster	MODERN SPECIES	794	Smim29 (ENSMAUG00000014272)	ENSMAUG00000012619	Grm4 (ENSMAUG00000014425)	Lemd2 (ENSMAUG00000008930) #7	Ip6k3 (ENSMAUG00000007919) #8	ENSMAUG00000015225	Itpr3 (ENSMAUG00000019945) #11	Ggnbp1 (ENSMAUG00000020283)	Bak1 (ENSMAUG00000018236) #12	Zbtb9 (ENSMAUG00000014578) #15	Syngap1 (ENSMAUG00000021307) #16	Cuta (ENSMAUG00000016276) #17	Phf1 (ENSMAUG00000002043) #18	ENSMAUG00000021378	ENSMAUG00000019318	Zbtb22 (ENSMAUG00000014068) #22	Tapbp (ENSMAUG00000005999) #23	ENSMAUG00000007762 #24	ENSMAUG00000017617	Pfdn6 (ENSMAUG00000014806) #25	Wdr46 (ENSMAUG00000000911) #26	B3galt4 (ENSMAUG00000021924) #27	ENSMAUG00000000317 ##28	Vps52 (ENSMAUG00000014379) #29
Chinese hamster chok1gshd	MODERN SPECIES	303	Smim29 (ENSCGRG00001011777)	Hmga1 (ENSCGRG00001002340)	ENSCGRG00001015412	Lemd2 (ENSCGRG00001010388) #7	Ip6k3 (ENSCGRG00001005691) #8	Uqcc2 (ENSCGRG00001023447) #9	Itpr3 (ENSCGRG00001002765) #11	Ggnbp1 (ENSCGRG00001015484)	Bak1 (ENSCGRG00001012370) #12	Zbtb9 (ENSCGRG00001012006) #15	Syngap1 (ENSCGRG00001017977) #16	Phf1 (ENSCGRG00001019832) #18	Cuta (ENSCGRG00001018695) #17	ENSCGRG00001012172	Daxx (ENSCGRG00001007861) #21	Zbtb22 (ENSCGRG00001020183) #22	Tapbp (ENSCGRG00001019225) #23	Rgl2 (ENSCGRG00001005003) #24	Pfdn6 (ENSCGRG00001001849) #25	Wdr46 (ENSCGRG00001019497) #26	B3galt4 (ENSCGRG00001016128) #27	ENSCGRG00001000148 #28	Vps52 (ENSCGRG00001014839) #29	ENSCGRG00001022861	ENSCGRG00001015089	ENSCGRG00001013481	ENSCGRG00001005422	ENSCGRG00001021916	ENSCGRG00001018670	Ddx39b (ENSCGRG00001017315)	Atp6v1g2 (ENSCGRG00001015820)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.f.a.b.b.a	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Northern American deer mouse	MODERN SPECIES	13	Hmga1b (ENSPEMG00000027659)	Grm4 (ENSPEMG00000008393)	Lemd2 (ENSPEMG00000029345) #7	Ip6k3 (ENSPEMG00000010729) #8	Uqcc2 (ENSPEMG00000019242) #9	Itpr3 (ENSPEMG00000010465) #11	Ggnbp1 (ENSPEMG00000017027)	Bak1 (ENSPEMG00000026995) #12	Zbtb9 (ENSPEMG00000005547) #15	Syngap1 (ENSPEMG00000016655) #16	Cuta (ENSPEMG00000015912) #17	Phf1 (ENSPEMG00000008040) #18	ENSPEMG00000005677 #19	ENSPEMG00000030934 #20	Daxx (ENSPEMG00000009347) #21	Zbtb22 (ENSPEMG00000019021) #22	Tapbp (ENSPEMG00000011953) #23	Rgl2 (ENSPEMG00000018722) #24	Pfdn6 (ENSPEMG00000005228) #25	Wdr46 (ENSPEMG00000019179) #26	B3galt4 (ENSPEMG00000004762) #27	Rps18 (ENSPEMG00000005058) #28	ENSPEMG00000030319	ENSPEMG00000030975	ENSPEMG00000024622	Ring1 (ENSPEMG00000019238) #30	Hsd17b8 (ENSPEMG00000012925) #31	Slc39a7 (ENSPEMG00000003403) #32	Rxrb (ENSPEMG00000018454) #33	Col11a2 (ENSPEMG00000016918) #34	ENSPEMG00000026148 #35
Murinae	ANCESTRAL SPECIES	18	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Mus	ANCESTRAL SPECIES	16	ENSGT00940000164108.b	ENSGT00940000158404	ENSGT00940000158870	ENSGT00390000006876	ENSGT00530000063460.B	ENSGT00940000154595.n	ENSGT00940000158995	ENSGT00940000161659	ENSGT00940000159478	ENSGT00940000161178	ENSGT00910000144227.s.a.h.k	ENSGT00390000006553	ENSGT00730000111436	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.c	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000158404	ENSGT00940000158870	ENSGT00390000006876	ENSGT00530000063460.B	ENSGT00940000154595.n	ENSGT00940000158995	ENSGT00940000161659	ENSGT00940000159478	ENSGT00940000161178	ENSGT00910000144227.s.a.h.k	ENSGT00390000006553	ENSGT00730000111436	ENSGT00940000161735.l #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000158404	ENSGT00940000158870	ENSGT00390000006876	ENSGT00530000063460.B	ENSGT00940000154595.n	ENSGT00940000158995	ENSGT00940000161659	ENSGT00940000159478	ENSGT00940000161178	ENSGT00910000144227.s.a.h.k	ENSGT00390000006553	ENSGT00730000111436	ENSGT00940000161735.l #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.`b #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Mouse	MODERN SPECIES	8	Zfp414 (ENSMUSG00000073423)	Pram1 (ENSMUSG00000032739)	Hnrnpm (ENSMUSG00000059208)	Marchf2 (ENSMUSG00000079557)	Rab11b (ENSMUSG00000077450)	Angptl4 (ENSMUSG00000002289)	Kank3 (ENSMUSG00000042099)	Rps28 (ENSMUSG00000067288)	Ndufa7 (ENSMUSG00000041881)	Cd320 (ENSMUSG00000002308)	Smim40-ps (ENSMUSG00000115113) #20	Kifc1 (ENSMUSG00000079553) #19	Smim40 (ENSMUSG00000092349) #20	Daxx (ENSMUSG00000002307) #21	Tapbp (ENSMUSG00000024308) #23	Zbtb22 (ENSMUSG00000051390) #22	Rgl2 (ENSMUSG00000041354) #24	Pfdn6 (ENSMUSG00000024309) #25	Wdr46 (ENSMUSG00000024312) #26	B3galt4 (ENSMUSG00000067370) #27	Rps18 (ENSMUSG00000008668) #28	Vps52 (ENSMUSG00000024319) #29	H2-K1 (ENSMUSG00000061232)	Ring1 (ENSMUSG00000024325) #30	Hsd17b8 (ENSMUSG00000073422) #31	Slc39a7 (ENSMUSG00000024327) #32	Rxrb (ENSMUSG00000039656) #33	Col11a2 (ENSMUSG00000024330) #34	H2-Oa (ENSMUSG00000024334) #37	Brd2 (ENSMUSG00000024335)	H2-DMa (ENSMUSG00000037649)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000163012.g	ENSGT00940000158404	ENSGT00940000158870	ENSGT00390000006876	ENSGT00530000063460.B	ENSGT00940000154595.n	ENSGT00940000158995	ENSGT00940000161659	ENSGT00940000159478	ENSGT00940000161178	ENSGT00910000144227.s.a.h.k	ENSGT00390000006553	ENSGT00730000111436	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.`b #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.p #28	ENSGT00390000008815 #29	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.a	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37
spretus	MODERN SPECIES	8	Actl9 (MGP_SPRETEiJ_G0022320)	Adamts10 (MGP_SPRETEiJ_G0022321)	Myo1f (MGP_SPRETEiJ_G0022322)	Zfp414 (MGP_SPRETEiJ_G0022323)	Pram1 (MGP_SPRETEiJ_G0022324)	Hnrnpm (MGP_SPRETEiJ_G0022325)	Marchf2 (MGP_SPRETEiJ_G0022326)	Rab11b (MGP_SPRETEiJ_G0022327)	Angptl4 (MGP_SPRETEiJ_G0022328)	Kank3 (MGP_SPRETEiJ_G0022329)	Rps28 (MGP_SPRETEiJ_G0022330)	Ndufa7 (MGP_SPRETEiJ_G0022331)	Cd320 (MGP_SPRETEiJ_G0022332)	Daxx (MGP_SPRETEiJ_G0022333) #21	Tapbp (MGP_SPRETEiJ_G0022334) #23	Zbtb22 (MGP_SPRETEiJ_G0022335) #22	Rgl2 (MGP_SPRETEiJ_G0022336) #24	Pfdn6 (MGP_SPRETEiJ_G0022337) #25	Wdr46 (MGP_SPRETEiJ_G0022338) #26	B3galt4 (MGP_SPRETEiJ_G0022339) #27	MGP_SPRETEiJ_G0022340 ##28	Ring1 (MGP_SPRETEiJ_G0022342) #30	Hsd17b8 (MGP_SPRETEiJ_G0022343) #31	Slc39a7 (MGP_SPRETEiJ_G0022344) #32	Rxrb (MGP_SPRETEiJ_G0022345) #33	Col11a2 (MGP_SPRETEiJ_G0022346) #34	H2-Oa (MGP_SPRETEiJ_G0022347) #37	Brd2 (MGP_SPRETEiJ_G0022348)	H2-DMa (MGP_SPRETEiJ_G0022349)	MGP_SPRETEiJ_G0022350	H2-DMb2 (MGP_SPRETEiJ_G0022351)
Steppe mouse	MODERN SPECIES	2564														ENSMSIG00000012579 #20	Daxx (ENSMSIG00000012554) #21	Zbtb22 (ENSMSIG00000012547) #22	Tapbp (ENSMSIG00000012535) #23	Rgl2 (ENSMSIG00000012505) #24	Pfdn6 (ENSMSIG00000012469) #25	Wdr46 (ENSMSIG00000012419) #26	B3galt4 (ENSMSIG00000012406) #27	Rps18 (ENSMSIG00000012382) #28	Vps52 (ENSMSIG00000012295) #29	ENSMSIG00000012249	ENSMSIG00000012243	Ring1 (ENSMSIG00000012190) #30	ENSMSIG00000012153 #31	Slc39a7 (ENSMSIG00000012137) #32	Rxrb (ENSMSIG00000012091) #33	Col11a2 (ENSMSIG00000011347) #34	ENSMSIG00000011214 #36
Ryukyu mouse	MODERN SPECIES	8	Actl9 (MGP_CAROLIEiJ_G0021408)	Adamts10 (MGP_CAROLIEiJ_G0021409)	Myo1f (MGP_CAROLIEiJ_G0021410)	Zfp414 (MGP_CAROLIEiJ_G0021411)	Pram1 (MGP_CAROLIEiJ_G0021412)	Hnrnpm (MGP_CAROLIEiJ_G0021413)	Marchf2 (MGP_CAROLIEiJ_G0021414)	Rab11b (MGP_CAROLIEiJ_G0021415)	Angptl4 (MGP_CAROLIEiJ_G0021416)	Kank3 (MGP_CAROLIEiJ_G0021417)	Rps28 (MGP_CAROLIEiJ_G0021418)	Ndufa7 (MGP_CAROLIEiJ_G0021419)	Cd320 (MGP_CAROLIEiJ_G0021420)	Daxx (MGP_CAROLIEiJ_G0021421) #21	Tapbp (MGP_CAROLIEiJ_G0021422) #23	Zbtb22 (MGP_CAROLIEiJ_G0021423) #22	Rgl2 (MGP_CAROLIEiJ_G0021424) #24	Pfdn6 (MGP_CAROLIEiJ_G0021425) #25	Wdr46 (MGP_CAROLIEiJ_G0021426) #26	B3galt4 (MGP_CAROLIEiJ_G0021427) #27	Rps18 (MGP_CAROLIEiJ_G0021428) #28	MGP_CAROLIEiJ_G0021429	MGP_CAROLIEiJ_G0021430	MGP_CAROLIEiJ_G0021431	MGP_CAROLIEiJ_G0021432	MGP_CAROLIEiJ_G0021434	MGP_CAROLIEiJ_G0021435	Ring1 (MGP_CAROLIEiJ_G0021436) #30	Hsd17b8 (MGP_CAROLIEiJ_G0021437) #31	Slc39a7 (MGP_CAROLIEiJ_G0021438) #32	Rxrb (MGP_CAROLIEiJ_G0021439) #33
Shrew mouse	MODERN SPECIES	9	Actl9 (MGP_PahariEiJ_G0020413)	Adamts10 (MGP_PahariEiJ_G0020414)	Myo1f (MGP_PahariEiJ_G0020415)	Zfp414 (MGP_PahariEiJ_G0020416)	Pram1 (MGP_PahariEiJ_G0020417)	Hnrnpm (MGP_PahariEiJ_G0020418)	Marchf2 (MGP_PahariEiJ_G0020419)	Rab11b (MGP_PahariEiJ_G0020420)	Angptl4 (MGP_PahariEiJ_G0020421)	MGP_PahariEiJ_G0020422	Rps28 (MGP_PahariEiJ_G0020423)	Ndufa7 (MGP_PahariEiJ_G0020424)	Cd320 (MGP_PahariEiJ_G0020425)	Daxx (MGP_PahariEiJ_G0020426) #21	Tapbp (MGP_PahariEiJ_G0020427) #23	Zbtb22 (MGP_PahariEiJ_G0020428) #22	Rgl2 (MGP_PahariEiJ_G0020429) #24	Pfdn6 (MGP_PahariEiJ_G0020430) #25	Wdr46 (MGP_PahariEiJ_G0020431) #26	B3galt4 (MGP_PahariEiJ_G0020432) #27	MGP_PahariEiJ_G0020433 #28	Ring1 (MGP_PahariEiJ_G0020434) #30	Hsd17b8 (MGP_PahariEiJ_G0020435) #31	Slc39a7 (MGP_PahariEiJ_G0020436) #32	Rxrb (MGP_PahariEiJ_G0020437) #33	Col11a2 (MGP_PahariEiJ_G0020438) #34	H2-Oa (MGP_PahariEiJ_G0020439) #37	Brd2 (MGP_PahariEiJ_G0020440)	H2-DMa (MGP_PahariEiJ_G0020441)	Psmb9 (MGP_PahariEiJ_G0020442)	Tap1 (MGP_PahariEiJ_G0020443)
Rat	MODERN SPECIES	12	Grm4 (ENSRNOG00000000487)	Mln (ENSRNOG00000042186)	Ip6k3 (ENSRNOG00000025883) #8	Uqcc2 (ENSRNOG00000025909)	ENSRNOG00000067891	Itpr3 (ENSRNOG00000052795) #11	Bak1 (ENSRNOG00000000485) #12	Ggnbp1 (ENSRNOG00000000486)	Zbtb9 (ENSRNOG00000026799) #15	Syngap1 (ENSRNOG00000000483) #16	Cuta (ENSRNOG00000000481) #17	Phf1 (ENSRNOG00000000480) #18	Kifc1 (ENSRNOG00000000479) #19	AA926063 (ENSRNOG00000000478)	Daxx (ENSRNOG00000000477) #21	Zbtb22 (ENSRNOG00000000476) #22	Tapbp (ENSRNOG00000029500) #23	Rgl2 (ENSRNOG00000000474) #24	Pfdn6 (ENSRNOG00000000473) #25	Wdr46 (ENSRNOG00000031171) #26	B3galt4 (ENSRNOG00000000471) #27	ENSRNOG00000069209	ENSRNOG00000062487	Vps52 (ENSRNOG00000000470) #29	Ring1 (ENSRNOG00000000467) #30	Hsd17b8 (ENSRNOG00000000466) #31	Slc39a7 (ENSRNOG00000000465) #32	Rxrb (ENSRNOG00000000464) #33	Col11a2 (ENSRNOG00000000463) #34	RT1-Hb-ps1 (ENSRNOG00000061936) #35	RT1-Ha (ENSRNOG00000045908) #36
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162390 #35	ENSGT00940000162112 #37
Pika	MODERN SPECIES	3164										ENSOPRG00000001127 #12	ZBTB9 (ENSOPRG00000019142) #15	SYNGAP1 (ENSOPRG00000001098) #16	PHF1 (ENSOPRG00000001082) #18	KIFC1 (ENSOPRG00000001063) #19	DAXX (ENSOPRG00000001051) #21	ENSOPRG00000001026 #22	TAPBP (ENSOPRG00000001010) #23	RGL2 (ENSOPRG00000000989) #24	ENSOPRG00000000983 #25	WDR46 (ENSOPRG00000000968) #26	B3GALT4 (ENSOPRG00000000967) #27	ENSOPRG00000000957 ##28	VPS52 (ENSOPRG00000000932) #29	RING1 (ENSOPRG00000000924) #30	HSD17B8 (ENSOPRG00000000920) #31	SLC39A7 (ENSOPRG00000000914) #32	RXRB (ENSOPRG00000000905) #33	COL11A2 (ENSOPRG00000000846) #34	ENSOPRG00000000840 #36	HLA-DPB1 (ENSOPRG00000000830) #35
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT01030000234972	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36
Suina	ANCESTRAL SPECIES	17	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.l #25	ENSGT01030000234972	ENSGT00390000010512.k #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000162318	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590	ENSGT00940000155064
Pig	MODERN SPECIES	15	GRM4 (ENSSSCG00000001523)	MLN (ENSSSCG00000001521)	LEMD2 (ENSSSCG00000001520) #7	IP6K3 (ENSSSCG00000039272) #8	UQCC2 (ENSSSCG00000030668) #9	ITPR3 (ENSSSCG00000001518) #11	ENSSSCG00000001517	ENSSSCG00000001516 #12	ZBTB9 (ENSSSCG00000060402) #15	SYNGAP1 (ENSSSCG00000001513) #16	CUTA (ENSSSCG00000001512) #17	PHF1 (ENSSSCG00000001511) #18	KIFC1 (ENSSSCG00000001510) #19	SMIM40 (ENSSSCG00000059451) #20	DAXX (ENSSSCG00000001509) #21	ZBTB22 (ENSSSCG00000054523) #22	TAPBP (ENSSSCG00000001507) #23	RGL2 (ENSSSCG00000001506) #24	ENSSSCG00000001505 #25	WDR46 (ENSSSCG00000001504) #26	B3GALT4 (ENSSSCG00000001503) #27	RPS18 (ENSSSCG00000001502) #28	VPS52 (ENSSSCG00000001501) #29	COL21A1 (ENSSSCG00000001500)	DST (ENSSSCG00000001499)	BEND6 (ENSSSCG00000001498)	ZNF451 (ENSSSCG00000001497)	BAG2 (ENSSSCG00000033526)	RAB23 (ENSSSCG00000029539)	PRIM2 (ENSSSCG00000001493)	ENSSSCG00000062933
Chacoan peccary	MODERN SPECIES	782	GRM4 (ENSCWAG00000012858)	MLN (ENSCWAG00000005531)	LEMD2 (ENSCWAG00000005562) #7	IP6K3 (ENSCWAG00000005636) #8	UQCC2 (ENSCWAG00000005671) #9	ITPR3 (ENSCWAG00000005745) #11	ENSCWAG00000005968	BAK1 (ENSCWAG00000006011) #12	ZBTB9 (ENSCWAG00000006043) #15	SYNGAP1 (ENSCWAG00000006055) #16	CUTA (ENSCWAG00000006165) #17	PHF1 (ENSCWAG00000006199) #18	KIFC1 (ENSCWAG00000006260) #19	SMIM40 (ENSCWAG00000006317) #20	DAXX (ENSCWAG00000006331) #21	ZBTB22 (ENSCWAG00000006346) #22	TAPBP (ENSCWAG00000006363) #23	ENSCWAG00000006431 #24	PFDN6 (ENSCWAG00000006480) #25	ENSCWAG00000006503	WDR46 (ENSCWAG00000006519) #26	B3GALT4 (ENSCWAG00000006580) #27	ENSCWAG00000006594 #28	VPS52 (ENSCWAG00000006627) #29	COL21A1 (ENSCWAG00000006695)	DST (ENSCWAG00000007332)	BEND6 (ENSCWAG00000010920)	ZNF451 (ENSCWAG00000010999)	BAG2 (ENSCWAG00000011125)	RAB23 (ENSCWAG00000011155)	PRIM2 (ENSCWAG00000011218)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Cetacea	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.g #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000153786.e.a.b	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.g #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000153786.e.a.b	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.g #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Dolphin	MODERN SPECIES	2738															DAXX (ENSTTRG00000004312) #21	ZBTB22 (ENSTTRG00000004311) #22	TAPBP (ENSTTRG00000004309) #23	RGL2 (ENSTTRG00000004307) #24	PFDN6 (ENSTTRG00000004306) #25	WDR46 (ENSTTRG00000004304) #26	RPS18 (ENSTTRG00000004302) #28	VPS52 (ENSTTRG00000004298) #29	RING1 (ENSTTRG00000004296) #30	HSD17B8 (ENSTTRG00000004294) #31	SLC39A7 (ENSTTRG00000004293) #32	RXRB (ENSTTRG00000004291) #33	COL11A2 (ENSTTRG00000004283) #34	HLA-DOA (ENSTTRG00000004282) #37	BRD2 (ENSTTRG00000004278)	HLA-DMA (ENSTTRG00000004277)	HLA-DMB (ENSTTRG00000004276)
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.g #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000154732.q.b.a
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000153786.e.a.b.f	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022.g #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000154732.q.b.a
Beluga whale	MODERN SPECIES	8	LEMD2 (ENSDLEG00000020047) #7	IP6K3 (ENSDLEG00000020042) #8	UQCC2 (ENSDLEG00000020040) #9	ENSDLEG00000020037	ITPR3 (ENSDLEG00000012814) #11	ENSDLEG00000012378	BAK1 (ENSDLEG00000012340) #12	ZBTB9 (ENSDLEG00000012333) #15	ENSDLEG00000012321	SYNGAP1 (ENSDLEG00000009904) #16	CUTA (ENSDLEG00000009700) #17	PHF1 (ENSDLEG00000009666) #18	KIFC1 (ENSDLEG00000009649) #19	SMIM40 (ENSDLEG00000009639) #20	DAXX (ENSDLEG00000009561) #21	ZBTB22 (ENSDLEG00000009549) #22	TAPBP (ENSDLEG00000009539) #23	ENSDLEG00000009529	RGL2 (ENSDLEG00000009432) #24	PFDN6 (ENSDLEG00000009394) #25	WDR46 (ENSDLEG00000009126) #26	B3GALT4 (ENSDLEG00000009097) #27	RPS18 (ENSDLEG00000009077) #28	VPS52 (ENSDLEG00000008948) #29	RING1 (ENSDLEG00000008919) #30	HSD17B8 (ENSDLEG00000008819) #31	SLC39A7 (ENSDLEG00000008789) #32	RXRB (ENSDLEG00000008760) #33	COL11A2 (ENSDLEG00000008562) #34	HLA-DOA (ENSDLEG00000008482) #37	ENSDLEG00000008322
Narwhal	MODERN SPECIES	310	MLN (ENSMMNG00015011804)	LEMD2 (ENSMMNG00015011822) #7	IP6K3 (ENSMMNG00015011838) #8	UQCC2 (ENSMMNG00015011853) #9	ITPR3 (ENSMMNG00015011896) #11	ENSMMNG00015011970	ENSMMNG00015011979	BAK1 (ENSMMNG00015012006) #12	ZBTB9 (ENSMMNG00015012021) #15	ENSMMNG00015012030	SYNGAP1 (ENSMMNG00015012086) #16	CUTA (ENSMMNG00015012280) #17	PHF1 (ENSMMNG00015012349) #18	KIFC1 (ENSMMNG00015012412) #19	DAXX (ENSMMNG00015012453) #21	ZBTB22 (ENSMMNG00015012464) #22	TAPBP (ENSMMNG00015012480) #23	RGL2 (ENSMMNG00015012522) #24	PFDN6 (ENSMMNG00015012541) #25	WDR46 (ENSMMNG00015012564) #26	B3GALT4 (ENSMMNG00015012584) #27	ENSMMNG00015012591 #28	VPS52 (ENSMMNG00015012607) #29	ENSMMNG00015012638 #30	HSD17B8 (ENSMMNG00015012658) #31	SLC39A7 (ENSMMNG00015012682) #32	RXRB (ENSMMNG00015012697) #33	COL11A2 (ENSMMNG00015012846) #34	ENSMMNG00015013117 #35	HLA-DOA (ENSMMNG00015013123) #37	ENSMMNG00015013152
Vaquita	MODERN SPECIES	2	GRM4 (ENSPSNG00000015059)	MLN (ENSPSNG00000014819)	LEMD2 (ENSPSNG00000014756) #7	IP6K3 (ENSPSNG00000014674) #8	UQCC2 (ENSPSNG00000014538) #9	ENSPSNG00000014465	ITPR3 (ENSPSNG00000013739) #11	ENSPSNG00000013586	BAK1 (ENSPSNG00000013464) #12	ZBTB9 (ENSPSNG00000013410) #15	SYNGAP1 (ENSPSNG00000012003) #16	CUTA (ENSPSNG00000011726) #17	KIFC1 (ENSPSNG00000011613) #19	SMIM40 (ENSPSNG00000011575) #20	DAXX (ENSPSNG00000011511) #21	ZBTB22 (ENSPSNG00000011484) #22	TAPBP (ENSPSNG00000011408) #23	RGL2 (ENSPSNG00000011206) #24	PFDN6 (ENSPSNG00000020614) #25	WDR46 (ENSPSNG00000020574) #26	B3GALT4 (ENSPSNG00000020525) #27	VPS52 (ENSPSNG00000020483) #29	RING1 (ENSPSNG00000020433) #30	HSD17B8 (ENSPSNG00000020389) #31	SLC39A7 (ENSPSNG00000020344) #32	RXRB (ENSPSNG00000020305) #33	COL11A2 (ENSPSNG00000019010) #34	ENSPSNG00000018732 #35	HLA-DOA (ENSPSNG00000018672) #37	ENSPSNG00000018620	BRD2 (ENSPSNG00000018549)
Sperm whale	MODERN SPECIES	255														SMIM40 (ENSPCTG00005016743) #20	DAXX (ENSPCTG00005016713) #21	ZBTB22 (ENSPCTG00005016698) #22	TAPBP (ENSPCTG00005016612) #23	RGL2 (ENSPCTG00005016381) #24	PFDN6 (ENSPCTG00005016295) #25	WDR46 (ENSPCTG00005016229) #26	B3GALT4 (ENSPCTG00005016212) #27	RPS18 (ENSPCTG00005016112) #28	VPS52 (ENSPCTG00005015756) #29
Blue whale	MODERN SPECIES	2	GRM4 (ENSBMSG00010009661)	MLN (ENSBMSG00010009751)	LEMD2 (ENSBMSG00010009773) #7	IP6K3 (ENSBMSG00010009797) #8	UQCC2 (ENSBMSG00010009808) #9	ITPR3 (ENSBMSG00010009844) #11	ENSBMSG00010009909	BAK1 (ENSBMSG00010009926) #12	ZBTB9 (ENSBMSG00010009949) #15	SYNGAP1 (ENSBMSG00010010019) #16	CUTA (ENSBMSG00010010557) #17	PHF1 (ENSBMSG00010010595) #18	KIFC1 (ENSBMSG00010010611) #19	SMIM40 (ENSBMSG00010010619) #20	DAXX (ENSBMSG00010010625) #21	ZBTB22 (ENSBMSG00010010638) #22	TAPBP (ENSBMSG00010010652) #23	RGL2 (ENSBMSG00010010689) #24	ENSBMSG00010010714 #25	WDR46 (ENSBMSG00010010725) #26	B3GALT4 (ENSBMSG00010010736) #27	RPS18 (ENSBMSG00010010743) #28	VPS52 (ENSBMSG00010010756) #29	ENSBMSG00010010769 #30	HSD17B8 (ENSBMSG00010010786) #31	SLC39A7 (ENSBMSG00010010802) #32	RXRB (ENSBMSG00010010818) #33	COL11A2 (ENSBMSG00010010982) #34	ENSBMSG00010011366 #35	HLA-DOA (ENSBMSG00010011380) #37	BRD2 (ENSBMSG00010011399)
Pecora	ANCESTRAL SPECIES	21	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Percora_a	ANCESTRAL SPECIES	12	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Bovidae	ANCESTRAL SPECIES	13	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Caprinae	ANCESTRAL SPECIES	16	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Goat	MODERN SPECIES	15	GRM4 (ENSCHIG00000015235)	MLN (ENSCHIG00000017878)	LEMD2 (ENSCHIG00000017649) #7	IP6K3 (ENSCHIG00000021074) #8	UQCC2 (ENSCHIG00000009060) #9	ITPR3 (ENSCHIG00000007818) #11	ENSCHIG00000007482	BAK1 (ENSCHIG00000016258) #12	ZBTB9 (ENSCHIG00000003330) #15	SYNGAP1 (ENSCHIG00000014463) #16	PHF1 (ENSCHIG00000023053) #18	CUTA (ENSCHIG00000012220) #17	KIFC1 (ENSCHIG00000019665) #19	ENSCHIG00000026105	ENSCHIG00000013938 #21	ZBTB22 (ENSCHIG00000003375) #22	TAPBP (ENSCHIG00000010108) #23	RGL2 (ENSCHIG00000009307) #24	ENSCHIG00000021078 #25	WDR46 (ENSCHIG00000017786) #26	B3GALT4 (ENSCHIG00000013295) #27	RPS18 (ENSCHIG00000025263) ##28	VPS52 (ENSCHIG00000023524) #29	RING1 (ENSCHIG00000015685) #30	HSD17B8 (ENSCHIG00000017839) #31	SLC39A7 (ENSCHIG00000024209) #32	RXRB (ENSCHIG00000010266) #33	COL11A2 (ENSCHIG00000012269) #34	HLA-DOA (ENSCHIG00000014302) #37	BRD2 (ENSCHIG00000013946)	HLA-DMA (ENSCHIG00000009464)
Rambouillet Sheep	MODERN SPECIES	12	GRM4 (ENSOARG00020018722)	MLN (ENSOARG00020018668)	LEMD2 (ENSOARG00020018611) #7	IP6K3 (ENSOARG00020018550) #8	UQCC2 (ENSOARG00020018431) #9	ITPR3 (ENSOARG00020017959) #11	ENSOARG00020017836	BAK1 (ENSOARG00020017744) #12	ZBTB9 (ENSOARG00020017726) #15	SYNGAP1 (ENSOARG00020014272) #16	CUTA (ENSOARG00020013904) #17	PHF1 (ENSOARG00020013705) #18	KIFC1 (ENSOARG00020013542) #19	SMIM40 (ENSOARG00020013486) #20	DAXX (ENSOARG00020013385) #21	ZBTB22 (ENSOARG00020013358) #22	TAPBP (ENSOARG00020013171) #23	RGL2 (ENSOARG00020012842) #24	PFDN6 (ENSOARG00020012726) #25	WDR46 (ENSOARG00020012626) #26	B3GALT4 (ENSOARG00020012594) #27	RPS18 (ENSOARG00020012536) #28	VPS52 (ENSOARG00020012385) #29	RING1 (ENSOARG00020012299) #30	HSD17B8 (ENSOARG00020012212) #31	SLC39A7 (ENSOARG00020012152) #32	RXRB (ENSOARG00020011980) #33	COL11A2 (ENSOARG00020011636) #34	HLA-DOA (ENSOARG00020011582) #37	BRD2 (ENSOARG00020011534)	HLA-DMA (ENSOARG00020025286)
Bovinae	ANCESTRAL SPECIES	9	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489.c	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Bos	ANCESTRAL SPECIES	17	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489.c	ENSGT00940000160955 #7	ENSGT00940000160887.b #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Bos_a	ANCESTRAL SPECIES	11	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489.c	ENSGT00940000160955 #7	ENSGT00940000160887.b #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Domestic yak	MODERN SPECIES	16	GRM4 (ENSBGRG00000020991)	MLN (ENSBGRG00000021370)	LEMD2 (ENSBGRG00000021442) #7	IP6K3 (ENSBGRG00000021534) #8	ENSBGRG00000021558 #8	UQCC2 (ENSBGRG00000021583) #9	ITPR3 (ENSBGRG00000021666) #11	ENSBGRG00000022171	BAK1 (ENSBGRG00000022225) #12	SYNGAP1 (ENSBGRG00000015797) #16	CUTA (ENSBGRG00000016639) #17	PHF1 (ENSBGRG00000016743) #18	KIFC1 (ENSBGRG00000016981) #19	SMIM40 (ENSBGRG00000017145) #20	DAXX (ENSBGRG00000017181) #21	ZBTB22 (ENSBGRG00000017270) #22	TAPBP (ENSBGRG00000017312) #23	RGL2 (ENSBGRG00000017715) #24	PFDN6 (ENSBGRG00000017800) #25	WDR46 (ENSBGRG00000017950) #26	B3GALT4 (ENSBGRG00000018285) #27	VPS52 (ENSBGRG00000018459) #29	RING1 (ENSBGRG00000018754) #30	HSD17B8 (ENSBGRG00000018839) #31	SLC39A7 (ENSBGRG00000018980) #32	RXRB (ENSBGRG00000019018) #33	COL11A2 (ENSBGRG00000019137) #34	HLA-DOA (ENSBGRG00000021588) #37	BRD2 (ENSBGRG00000021629)	HLA-DMA (ENSBGRG00000021851)	HLA-DMB (ENSBGRG00000021922)
Wild yak	MODERN SPECIES	401		MLN (ENSBMUG00000019296)	ENSBMUG00000019272 #7	IP6K3 (ENSBMUG00000019221) #8	UQCC2 (ENSBMUG00000019181) #9	ITPR3 (ENSBMUG00000015536) #11	ENSBMUG00000009194	BAK1 (ENSBMUG00000009180) #12	ZBTB9 (ENSBMUG00000009163) #15	SYNGAP1 (ENSBMUG00000009132) #16	CUTA (ENSBMUG00000009105) #17	PHF1 (ENSBMUG00000009079) #18	KIFC1 (ENSBMUG00000009021) #19	SMIM40 (ENSBMUG00000009010) #20	DAXX (ENSBMUG00000008993) #21	ZBTB22 (ENSBMUG00000008980) #22	TAPBP (ENSBMUG00000008952) #23	RGL2 (ENSBMUG00000008900) #24	PFDN6 (ENSBMUG00000008885) #25	WDR46 (ENSBMUG00000008867) #26	B3GALT4 (ENSBMUG00000008835) #27	ENSBMUG00000008818 #28	VPS52 (ENSBMUG00000008802) #29	RING1 (ENSBMUG00000008786) #30	HSD17B8 (ENSBMUG00000008752) #31	SLC39A7 (ENSBMUG00000008706) #32	RXRB (ENSBMUG00000008461) #33	COL11A2 (ENSBMUG00000008342) #34	HLA-DOA (ENSBMUG00000008090) #37	BRD2 (ENSBMUG00000008066)	HLA-DMA (ENSBMUG00000008047)
Bos_b	ANCESTRAL SPECIES	8	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489.c	ENSGT00940000160955 #7	ENSGT00940000160887.b #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.o.a #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Cow	MODERN SPECIES	15	HMGA1 (ENSBTAG00000034529)	GRM4 (ENSBTAG00000013632)	MLN (ENSBTAG00000015550)	LEMD2 (ENSBTAG00000015538) #7	IP6K3 (ENSBTAG00000033603) #8	UQCC2 (ENSBTAG00000054726) #9	ITPR3 (ENSBTAG00000013245) #11	GGNBP1 (ENSBTAG00000011057)	BAK1 (ENSBTAG00000000428) #12	ZBTB9 (ENSBTAG00000038888) #15	SYNGAP1 (ENSBTAG00000020975) #16	CUTA (ENSBTAG00000001635) #17	PHF1 (ENSBTAG00000001634) #18	KIFC1 (ENSBTAG00000001631) #19	DAXX (ENSBTAG00000016830) #21	ZBTB22 (ENSBTAG00000016829) #22	TAPBP (ENSBTAG00000016828) #23	RGL2 (ENSBTAG00000016827) #24	PFDN6 (ENSBTAG00000010723) #25	WDR46 (ENSBTAG00000016824) #26	B3GALT4 (ENSBTAG00000025669) #27	RPS18 (ENSBTAG00000002648) ##28	VPS52 (ENSBTAG00000002643) #29	RING1 (ENSBTAG00000018884) #30	HSD17B8 (ENSBTAG00000020927) #31	SLC39A7 (ENSBTAG00000008191) #32	RXRB (ENSBTAG00000000602) #33	COL11A2 (ENSBTAG00000000601) #34	BOLA-DOA (ENSBTAG00000006490) #37	BRD2 (ENSBTAG00000011074)	BOLA-DMA (ENSBTAG00000015730)
Hybrid Bos Indicus	MODERN SPECIES	15	GRM4 (ENSBIXG00005006797)	ENSBIXG00005013091	LEMD2 (ENSBIXG00005013140) #7	IP6K3 (ENSBIXG00005001507) #8	UQCC2 (ENSBIXG00005013203) #9	ITPR3 (ENSBIXG00005013427) #11	ENSBIXG00005013470	BAK1 (ENSBIXG00005001624) #12	ZBTB9 (ENSBIXG00005013532) #15	SYNGAP1 (ENSBIXG00005013877) #16	CUTA (ENSBIXG00005001757) #17	PHF1 (ENSBIXG00005007493) #18	KIFC1 (ENSBIXG00005001822) #19	SMIM40 (ENSBIXG00005014070) #20	DAXX (ENSBIXG00005001833) #21	ZBTB22 (ENSBIXG00005014096) #22	TAPBP (ENSBIXG00005006125) #23	RGL2 (ENSBIXG00005014224) #24	PFDN6 (ENSBIXG00005014270) #25	WDR46 (ENSBIXG00005014304) #26	B3GALT4 (ENSBIXG00005014338) #27	RPS18 (ENSBIXG00005006736) ##28	VPS52 (ENSBIXG00005014413) #29	RING1 (ENSBIXG00005006128) #30	HSD17B8 (ENSBIXG00005001937) #31	SLC39A7 (ENSBIXG00005014473) #32	RXRB (ENSBIXG00005014520) #33	COL11A2 (ENSBIXG00005014598) #34	HLA-DOA (ENSBIXG00005014640) #37	BRD2 (ENSBIXG00005014704)	HLA-DMA (ENSBIXG00005014743)
American bison	MODERN SPECIES	3186	ENSBBBG00000014085	ENSBBBG00000014096 #7	IP6K3 (ENSBBBG00000014104) #8	UQCC2 (ENSBBBG00000014109) #9	ITPR3 (ENSBBBG00000014413) #11	ENSBBBG00000014460	BAK1 (ENSBBBG00000014474) #12	ZBTB9 (ENSBBBG00000014478) #15	SYNGAP1 (ENSBBBG00000001211) #16	CUTA (ENSBBBG00000001096) #17	PHF1 (ENSBBBG00000001027) #18	KIFC1 (ENSBBBG00000001000) #19	ENSBBBG00000000992	SMIM40 (ENSBBBG00000000988) #20	DAXX (ENSBBBG00000000938) #21	ZBTB22 (ENSBBBG00000000917) #22	TAPBP (ENSBBBG00000000871) #23	RGL2 (ENSBBBG00000000845) #24	PFDN6 (ENSBBBG00000014925) #25	WDR46 (ENSBBBG00000014933) #26	B3GALT4 (ENSBBBG00000003638) #27	RPS18 (ENSBBBG00000003625) #28	VPS52 (ENSBBBG00000003598) #29	RING1 (ENSBBBG00000003692) #30	HSD17B8 (ENSBBBG00000003696) #31	SLC39A7 (ENSBBBG00000014969) #32	RXRB (ENSBBBG00000015089) #33	ENSBBBG00000003746 #34	HLA-DOA (ENSBBBG00000015112) #37	BRD2 (ENSBBBG00000002785)	HLA-DMA (ENSBBBG00000015169)
Siberian musk deer	MODERN SPECIES	355	GRM4 (ENSMMSG00000023487)	MLN (ENSMMSG00000023475)	LEMD2 (ENSMMSG00000023465) #7	IP6K3 (ENSMMSG00000023458) #8	ENSMMSG00000023443 #9	ITPR3 (ENSMMSG00000023429) #11	ENSMMSG00000023420	BAK1 (ENSMMSG00000023407) #12	ZBTB9 (ENSMMSG00000023399) #15	SYNGAP1 (ENSMMSG00000023343) #16	CUTA (ENSMMSG00000023317) #17	PHF1 (ENSMMSG00000023287) #18	KIFC1 (ENSMMSG00000023227) #19	SMIM40 (ENSMMSG00000023214) #20	DAXX (ENSMMSG00000023208) #21	ZBTB22 (ENSMMSG00000023203) #22	TAPBP (ENSMMSG00000023185) #23	RGL2 (ENSMMSG00000023157) #24	ENSMMSG00000023143 #25	WDR46 (ENSMMSG00000023133) #26	B3GALT4 (ENSMMSG00000023125) #27	RPS18 (ENSMMSG00000023117) #28	VPS52 (ENSMMSG00000023094) #29	RING1 (ENSMMSG00000023081) #30	HSD17B8 (ENSMMSG00000023067) #31	SLC39A7 (ENSMMSG00000023058) #32	RXRB (ENSMMSG00000023046) #33	COL11A2 (ENSMMSG00000022475) #34	HLA-DOA (ENSMMSG00000022389) #37	BRD2 (ENSMMSG00000022334)	HLA-DMA (ENSMMSG00000022283)
Yarkand deer	MODERN SPECIES	30	GRM4 (ENSCHYG00000006106)	ENSCHYG00000006032	LEMD2 (ENSCHYG00000005984) #7	IP6K3 (ENSCHYG00000005950) #8	UQCC2 (ENSCHYG00000005875) #9	ITPR3 (ENSCHYG00000005797) #11	ENSCHYG00000005749	BAK1 (ENSCHYG00000005696) #12	ZBTB9 (ENSCHYG00000005656) #15	SYNGAP1 (ENSCHYG00000005513) #16	CUTA (ENSCHYG00000005349) #17	PHF1 (ENSCHYG00000005145) #18	KIFC1 (ENSCHYG00000005051) #19	SMIM40 (ENSCHYG00000005026) #20	DAXX (ENSCHYG00000005013) #21	ZBTB22 (ENSCHYG00000004990) #22	TAPBP (ENSCHYG00000004933) #23	RGL2 (ENSCHYG00000004896) #24	PFDN6 (ENSCHYG00000004871) #25	WDR46 (ENSCHYG00000004759) #26	B3GALT4 (ENSCHYG00000004743) #27	RPS18 (ENSCHYG00000004733) #28	VPS52 (ENSCHYG00000004695) #29	RING1 (ENSCHYG00000004682) #30	COL11A2 (ENSCHYG00000004624) #34	HLA-DOA (ENSCHYG00000004561) #37	BRD2 (ENSCHYG00000004539)	HLA-DMA (ENSCHYG00000004520)	HLA-DMB (ENSCHYG00000004514)	ENSCHYG00000004500	TAP1 (ENSCHYG00000004483)
Camelidae	ANCESTRAL SPECIES	13	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Arabian camel	MODERN SPECIES	12	GRM4 (ENSCDRG00005003578)	MLN (ENSCDRG00005003452)	ENSCDRG00005021748 #7	IP6K3 (ENSCDRG00005021743) #8	UQCC2 (ENSCDRG00005021740) #9	ITPR3 (ENSCDRG00005021737) #11	ENSCDRG00005021734	BAK1 (ENSCDRG00005021730) #12	ZBTB9 (ENSCDRG00005021729) #15	SYNGAP1 (ENSCDRG00005021714) #16	CUTA (ENSCDRG00005021706) #17	PHF1 (ENSCDRG00005021700) #18	KIFC1 (ENSCDRG00005021698) #19	SMIM40 (ENSCDRG00005021695) #20	DAXX (ENSCDRG00005021691) #21	ZBTB22 (ENSCDRG00005021690) #22	TAPBP (ENSCDRG00005021686) #23	RGL2 (ENSCDRG00005021678) #24	PFDN6 (ENSCDRG00005021673) #25	WDR46 (ENSCDRG00005021663) #26	B3GALT4 (ENSCDRG00005021661) #27	RPS18 (ENSCDRG00005021659) #28	VPS52 (ENSCDRG00005021653) #29	RING1 (ENSCDRG00005021646) #30	HSD17B8 (ENSCDRG00005021643) #31	SLC39A7 (ENSCDRG00005021641) #32	RXRB (ENSCDRG00005021632) #33	COL11A2 (ENSCDRG00005021542) #34	HLA-DPB1 (ENSCDRG00005021506) #35	HLA-DPA1 (ENSCDRG00005021505) #36	HLA-DOA (ENSCDRG00005021502) #37
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Carnivora	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Caniformia	ANCESTRAL SPECIES	3	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Ursidae	ANCESTRAL SPECIES	37	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.d #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.w #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Ursus	ANCESTRAL SPECIES	53	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.d #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b.w #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162498 #36	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Polar bear	MODERN SPECIES	184	HMGA1 (ENSUMAG00000010910)	GRM4 (ENSUMAG00000010915)	MLN (ENSUMAG00000010935)	LEMD2 (ENSUMAG00000010937) #7	IP6K3 (ENSUMAG00000010952) #8	UQCC2 (ENSUMAG00000010960) #9	ITPR3 (ENSUMAG00000011124) #11	ENSUMAG00000012167	ENSUMAG00000012169 #12	ZBTB9 (ENSUMAG00000012186) #15	SYNGAP1 (ENSUMAG00000012214) #16	CUTA (ENSUMAG00000012326) #17	PHF1 (ENSUMAG00000012332) #18	KIFC1 (ENSUMAG00000012334) #19	DAXX (ENSUMAG00000012343) #21	ZBTB22 (ENSUMAG00000012348) #22	TAPBP (ENSUMAG00000012349) #23	RGL2 (ENSUMAG00000012351) #24	PFDN6 (ENSUMAG00000012363) #25	WDR46 (ENSUMAG00000012375) #26	RPS18 (ENSUMAG00000012521) #28	VPS52 (ENSUMAG00000012525) #29	RING1 (ENSUMAG00000012543) #30	HSD17B8 (ENSUMAG00000012548) #31	SLC39A7 (ENSUMAG00000012560) #32	RXRB (ENSUMAG00000012569) #33	ENSUMAG00000012592 #34	ENSUMAG00000012616 #36	HLA-DOA (ENSUMAG00000012626) #37	ENSUMAG00000012634	ENSUMAG00000012662
American black bear	MODERN SPECIES	175	MLN (ENSUAMG00000005048)	ENSUAMG00000005046 #7	ENSUAMG00000005042 #7	IP6K3 (ENSUAMG00000005038) #8	UQCC2 (ENSUAMG00000005036) #9	ITPR3 (ENSUAMG00000000807) #11	ENSUAMG00000000617	BAK1 (ENSUAMG00000000611) #12	ZBTB9 (ENSUAMG00000000601) #15	SYNGAP1 (ENSUAMG00000000065) #16	CUTA (ENSUAMG00000026966) #17	PHF1 (ENSUAMG00000026961) #18	KIFC1 (ENSUAMG00000026955) #19	SMIM40 (ENSUAMG00000026954) #20	DAXX (ENSUAMG00000026953) #21	ZBTB22 (ENSUAMG00000026952) #22	TAPBP (ENSUAMG00000026951) #23	RGL2 (ENSUAMG00000026945) #24	PFDN6 (ENSUAMG00000026943) #25	WDR46 (ENSUAMG00000026936) #26	B3GALT4 (ENSUAMG00000026933) #27	RPS18 (ENSUAMG00000026928) #28	VPS52 (ENSUAMG00000026926) #29	RING1 (ENSUAMG00000026924) #30	HSD17B8 (ENSUAMG00000026922) #31	SLC39A7 (ENSUAMG00000026920) #32	RXRB (ENSUAMG00000026918) #33	COL11A2 (ENSUAMG00000026897) #34	ENSUAMG00000026889 #36	HLA-DOA (ENSUAMG00000026886) #37
Giant Panda	MODERN SPECIES	15	HMGA1 (ENSAMEG00000001061)	GRM4 (ENSAMEG00000001063)	ENSAMEG00000001099 #7	IP6K3 (ENSAMEG00000001109) #8	UQCC2 (ENSAMEG00000029955) #9	ITPR3 (ENSAMEG00000001124) #11	ENSAMEG00000001355	ENSAMEG00000001363 #12	ZBTB9 (ENSAMEG00000019731) #15	SYNGAP1 (ENSAMEG00000001379) #16	CUTA (ENSAMEG00000001407) #17	PHF1 (ENSAMEG00000001427) #18	KIFC1 (ENSAMEG00000001458) #19	SMIM40 (ENSAMEG00000030691) #20	DAXX (ENSAMEG00000001484) #21	ZBTB22 (ENSAMEG00000019741) #22	TAPBP (ENSAMEG00000001518) #23	RGL2 (ENSAMEG00000001533) #24	PFDN6 (ENSAMEG00000001576) #25	WDR46 (ENSAMEG00000001583) #26	B3GALT4 (ENSAMEG00000019752) #27	RPS18 (ENSAMEG00000001623) #28	VPS52 (ENSAMEG00000001640) #29	RING1 (ENSAMEG00000001680) #30	HSD17B8 (ENSAMEG00000001698) #31	SLC39A7 (ENSAMEG00000001707) #32	RXRB (ENSAMEG00000001719) #33	COL11A2 (ENSAMEG00000001744) #34	ENSAMEG00000001900 #35	HLA-DPA1 (ENSAMEG00000001901) #36	HLA-DOA (ENSAMEG00000001908) #37
Mustelinae	ANCESTRAL SPECIES	65	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078.`c #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Ferret	MODERN SPECIES	318	MLN (ENSMPUG00000003080)	LEMD2 (ENSMPUG00000003061) #7	ENSMPUG00000003058	IP6K3 (ENSMPUG00000003052) #8	UQCC2 (ENSMPUG00000003032) #9	ENSMPUG00000002462 #11	ENSMPUG00000002458	ENSMPUG00000002455	BAK1 (ENSMPUG00000002438) #12	ZBTB9 (ENSMPUG00000018789) #15	SYNGAP1 (ENSMPUG00000002431) #16	CUTA (ENSMPUG00000002420) #17	PHF1 (ENSMPUG00000002414) #18	KIFC1 (ENSMPUG00000002409) #19	DAXX (ENSMPUG00000002405) #21	ZBTB22 (ENSMPUG00000018787) #22	TAPBP (ENSMPUG00000002383) #23	RGL2 (ENSMPUG00000002376) #24	PFDN6 (ENSMPUG00000002364) #25	ENSMPUG00000002317 #26	B3GALT4 (ENSMPUG00000018786) #27	RPS18 (ENSMPUG00000002306) ##28	VPS52 (ENSMPUG00000002300) #29	RING1 (ENSMPUG00000002279) #30	SLC39A7 (ENSMPUG00000002276) #32	RXRB (ENSMPUG00000002273) #33	COL11A2 (ENSMPUG00000001968) #34	ENSMPUG00000001964 #35	HLA-DPA1 (ENSMPUG00000001961) #36	ENSMPUG00000001959	HLA-DOA (ENSMPUG00000001958) #37
American mink	MODERN SPECIES	258	GRM4 (ENSNVIG00000012391)	MLN (ENSNVIG00000012447)	LEMD2 (ENSNVIG00000012480) #7	IP6K3 (ENSNVIG00000012514) #8	UQCC2 (ENSNVIG00000012538) #9	ITPR3 (ENSNVIG00000012548) #11	ENSNVIG00000012687	BAK (ENSNVIG00000012694) #12	ZBTB9 (ENSNVIG00000012705) #15	SYNGAP1 (ENSNVIG00000012712) #16	CUTA (ENSNVIG00000012780) #17	PHF1 (ENSNVIG00000012814) #18	ENSNVIG00000012872	SMIM40 (ENSNVIG00000012878) #20	DAXX (ENSNVIG00000012888) #21	ZBTB22 (ENSNVIG00000012910) #22	TAPBP (ENSNVIG00000012929) #23	RGL2 (ENSNVIG00000012961) #24	PFDN6 (ENSNVIG00000012998) #25	WDR46 (ENSNVIG00000013009) #26	B3GALT4 (ENSNVIG00000013023) #27	RPS18 (ENSNVIG00000013029) #28	VPS52 (ENSNVIG00000013051) #29	ENSNVIG00000013094 #30
Canidae	ANCESTRAL SPECIES	6	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815.g.b #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000153117.B.c.a.d.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512.e.b #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815.g.b #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b
Dog	MODERN SPECIES	3	MLN (ENSCAFG00845026089)	LEMD2 (ENSCAFG00845025993) #7	IP6K3 (ENSCAFG00845025943) #8	UQCC2 (ENSCAFG00845025862) #9	ITPR3 (ENSCAFG00845023922) #11	ENSCAFG00845023632	BAK1 (ENSCAFG00845023547) #12	ENSCAFG00845023466	ZBTB9 (ENSCAFG00845023405) #15	SYNGAP1 (ENSCAFG00845022368) #16	CUTA (ENSCAFG00845022043) #17	PHF1 (ENSCAFG00845021851) #18	KIFC1 (ENSCAFG00845021754) #19	SMIM40 (ENSCAFG00845021695) #20	DAXX (ENSCAFG00845021574) #21	ZBTB22 (ENSCAFG00845021534) #22	TAPBP (ENSCAFG00845021421) #23	RGL2 (ENSCAFG00845021267) #24	PFDN6 (ENSCAFG00845021180) #25	WDR46 (ENSCAFG00845021010) #26	B3GALT4 (ENSCAFG00845020962) #27	RPS18 (ENSCAFG00845020845) ##28	VPS52 (ENSCAFG00845020730) #29	RING1 (ENSCAFG00845020668) #30	HSD17B8 (ENSCAFG00845020603) #31	SLC39A7 (ENSCAFG00845020536) #32	RXRB (ENSCAFG00845020447) #33	COL11A2 (ENSCAFG00845019587) #34	ENSCAFG00845019114 #35	DLA-DOA (ENSCAFG00845018933) #37	BRD2 (ENSCAFG00845018726)
Dingo	MODERN SPECIES	276	MLN (ENSCAFG00020006103)	LEMD2 (ENSCAFG00020006098) #7	IP6K3 (ENSCAFG00020006095) #8	UQCC2 (ENSCAFG00020006083) #9	ENSCAFG00020005090 #11	ENSCAFG00020003859 #11	ENSCAFG00020003809	BAK1 (ENSCAFG00020003807) #12	ZBTB9 (ENSCAFG00020003798) #15	SYNGAP1 (ENSCAFG00020003455) #16	CUTA (ENSCAFG00020003385) #17	ENSCAFG00020003379 #18	PHF1 (ENSCAFG00020003366) #18	SMIM40 (ENSCAFG00020003364) #20	DAXX (ENSCAFG00020003346) #21	ZBTB22 (ENSCAFG00020003345) #22	TAPBP (ENSCAFG00020003337) #23	RGL2 (ENSCAFG00020003330) #24	ENSCAFG00020003316 #25	WDR46 (ENSCAFG00020003271) #26	B3GALT4 (ENSCAFG00020003269) #27	RPS18 (ENSCAFG00020003254) #28	ENSCAFG00020003224 #29	RING1 (ENSCAFG00020003221) #30	HSD17B8 (ENSCAFG00020003175) #31	SLC39A7 (ENSCAFG00020003166) #32	RXRB (ENSCAFG00020003098) #33	ENSCAFG00020003093 #34	ENSCAFG00020003072 #34	ENSCAFG00020002592 #35	HLA-DOA (ENSCAFG00020002545) #37
Red fox	MODERN SPECIES	7	GRM4 (ENSVVUG00000026106)	MLN (ENSVVUG00000026102)	LEMD2 (ENSVVUG00000026101) #7	IP6K3 (ENSVVUG00000026099) #8	ENSVVUG00000026098 #9	ENSVVUG00000025902 #11	ENSVVUG00000025665 #11	BAK1 (ENSVVUG00000025650) #12	ZBTB9 (ENSVVUG00000025646) #15	SYNGAP1 (ENSVVUG00000025640) #16	CUTA (ENSVVUG00000025622) #17	PHF1 (ENSVVUG00000025614) #18	ENSVVUG00000025594	SMIM40 (ENSVVUG00000025592) #20	DAXX (ENSVVUG00000025591) #21	ZBTB22 (ENSVVUG00000025590) #22	TAPBP (ENSVVUG00000025586) #23	RGL2 (ENSVVUG00000025551) #24	PFDN6 (ENSVVUG00000025545) #25	WDR46 (ENSVVUG00000025460) #26	B3GALT4 (ENSVVUG00000025447) #27	RPS18 (ENSVVUG00000025443) #28	ENSVVUG00000025286 #29	RING1 (ENSVVUG00000025271) #30	HSD17B8 (ENSVVUG00000025268) #31	SLC39A7 (ENSVVUG00000025265) #32	RXRB (ENSVVUG00000025262) #33	ENSVVUG00000025174 #35	HLA-DPA1 (ENSVVUG00000025137) #36	HLA-DOA (ENSVVUG00000025133) #37	BRD2 (ENSVVUG00000025130)
Felidae	ANCESTRAL SPECIES	5	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT01000000221634	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798.h #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762.cc #34	ENSGT00940000162390.q #35	ENSGT00940000162390.p #35	ENSGT00940000162498 #36
Panthera	ANCESTRAL SPECIES	7	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A.k #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT01000000221634	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798.h #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762.cc #34	ENSGT00940000162390.p #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A.k #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT01000000221634	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798.h #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762.cc #34	ENSGT00940000162390.p #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
leopard	MODERN SPECIES	30	ENSPPRG00000003780	MLN (ENSPPRG00000005124)	LEMD2 (ENSPPRG00000005449) #7	IP6K3 (ENSPPRG00000006044) #8	UQCC2 (ENSPPRG00000006383) #9	ITPR3 (ENSPPRG00000011688) #11	ENSPPRG00000012361	ENSPPRG00000012994 #12	ENSPPRG00000013423	ZBTB9 (ENSPPRG00000020032) #15	SYNGAP1 (ENSPPRG00000022184) #16	CUTA (ENSPPRG00000023270) #17	PHF1 (ENSPPRG00000000222) #18	KIFC1 (ENSPPRG00000000899) #19	DAXX (ENSPPRG00000002274) #21	ZBTB22 (ENSPPRG00000020462) #22	TAPBP (ENSPPRG00000003578) #23	RGL2 (ENSPPRG00000004409) #24	PFDN6 (ENSPPRG00000005109) #25	WDR46 (ENSPPRG00000005881) #26	B3GALT4 (ENSPPRG00000006033) #27	RPS18 (ENSPPRG00000006936) #28	VPS52 (ENSPPRG00000007986) #29	RING1 (ENSPPRG00000008873) #30	HSD17B8 (ENSPPRG00000008960) #31	SLC39A7 (ENSPPRG00000009227) #32	RXRB (ENSPPRG00000010222) #33	COL11A2 (ENSPPRG00000001194) #34	HLA-DPB1 (ENSPPRG00000002022) #35	HLA-DPA1 (ENSPPRG00000002267) #36	HLA-DOA (ENSPPRG00000002484) #37
lion	MODERN SPECIES	5	MLN (ENSPLOG00000011654)	LEMD2 (ENSPLOG00000011596) #7	IP6K3 (ENSPLOG00000011552) #8	UQCC2 (ENSPLOG00000011487) #9	ITPR3 (ENSPLOG00000011420) #11	ENSPLOG00000011334	ENSPLOG00000011229 #12	ZBTB9 (ENSPLOG00000011169) #15	SYNGAP1 (ENSPLOG00000010427) #16	CUTA (ENSPLOG00000010187) #17	PHF1 (ENSPLOG00000010046) #18	KIFC1 (ENSPLOG00000009952) #19	ENSPLOG00000009926	SMIM40 (ENSPLOG00000009910) #20	DAXX (ENSPLOG00000009856) #21	ZBTB22 (ENSPLOG00000009838) #22	TAPBP (ENSPLOG00000009777) #23	RGL2 (ENSPLOG00000009682) #24	PFDN6 (ENSPLOG00000009614) #25	WDR46 (ENSPLOG00000009542) #26	B3GALT4 (ENSPLOG00000009525) #27	RPS18 (ENSPLOG00000009471) #28	VPS52 (ENSPLOG00000009344) #29	RING1 (ENSPLOG00000009313) #30	HSD17B8 (ENSPLOG00000009241) #31	SLC39A7 (ENSPLOG00000009206) #32	RXRB (ENSPLOG00000009094) #33	COL11A2 (ENSPLOG00000007928) #34	ENSPLOG00000007166 #35	HLA-DPA1 (ENSPLOG00000006949) #36	HLA-DOA (ENSPLOG00000006926) #37
Cat	DUPLICATION
Cat	MODERN SPECIES	236	ENSFCAG00000042732 #37	ENSFCAG00000042841	ENSFCAG00000009442	ENSFCAG00000045369	ENSFCAG00000050701	ENSFCAG00000044069	ENSFCAG00000042456	ENSFCAG00000043821	ENSFCAG00000045700	ENSFCAG00000009202	ENSFCAG00000040474	ENSFCAG00000041443 #19	ENSFCAG00000052131	ENSFCAG00000053744 #20	DAXX (ENSFCAG00000004020) #21	ENSFCAG00000049571 #22	ENSFCAG00000043390 #23	ENSFCAG00000029182 #24	ENSFCAG00000028199 #25	ENSFCAG00000051171 #26	ENSFCAG00000052529 #27	ENSFCAG00000041843 #28	VPS52 (ENSFCAG00000004011) #29	ENSFCAG00000041942 #30	HSD17B8 (ENSFCAG00000006986) #31	ENSFCAG00000046098 #32	ENSFCAG00000050544	ENSFCAG00000042526 #33	ENSFCAG00000046454 #34	ENSFCAG00000047214 #34	ENSFCAG00000041523 #35
Cat	MODERN SPECIES	236	GRM4 (ENSFCAG00000015349)	MLN (ENSFCAG00000005275)	LEMD2 (ENSFCAG00000005274) #7	IP6K3 (ENSFCAG00000040779) #8	UQCC2 (ENSFCAG00000041370) #9	ITPR3 (ENSFCAG00000013659) #11	GGNBP1 (ENSFCAG00000022517)	BAK1 (ENSFCAG00000032638) #12	ZBTB9 (ENSFCAG00000027926) #15	SYNGAP1 (ENSFCAG00000013656) #16	CUTA (ENSFCAG00000013655) #17	PHF1 (ENSFCAG00000013654) #18	KIFC1 (ENSFCAG00000013653) #19	ENSFCAG00000047002 #20	ENSFCAG00000046536	ENSFCAG00000050206 #22	ENSFCAG00000004017 #23	ENSFCAG00000042019 #24	ENSFCAG00000046037 #25	WDR46 (ENSFCAG00000004016) #26	B3GALT4 (ENSFCAG00000004015) #27	ENSFCAG00000045696 #28	ENSFCAG00000004010 #30	ENSFCAG00000043560 #29	ENSFCAG00000006984 #32	ENSFCAG00000006981 #33	COL11A2 (ENSFCAG00000004005) #34	ENSFCAG00000041258 #35	ENSFCAG00000044012 #36	ENSFCAG00000042732 #37	ENSFCAG00000042841
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Chiroptera	ANCESTRAL SPECIES	3	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498 #36	ENSGT00940000162112 #37
Greater horseshoe bat	MODERN SPECIES	21	MLN (ENSRFEG00010017151)	LEMD2 (ENSRFEG00010017087) #7	IP6K3 (ENSRFEG00010017031) #8	ENSRFEG00010016929	ITPR3 (ENSRFEG00010016881) #11	ENSRFEG00010016790	BAK1 (ENSRFEG00010016690) #12	ZBTB9 (ENSRFEG00010016671) #15	SYNGAP1 (ENSRFEG00010015951) #16	CUTA (ENSRFEG00010015764) #17	PHF1 (ENSRFEG00010015595) #18	KIFC1 (ENSRFEG00010015527) #19	ENSRFEG00010015490	SMIM40 (ENSRFEG00010015468) #20	DAXX (ENSRFEG00010015408) #21	ZBTB22 (ENSRFEG00010015390) #22	TAPBP (ENSRFEG00010015262) #23	RGL2 (ENSRFEG00010015178) #24	ENSRFEG00010014998 #25	WDR46 (ENSRFEG00010014756) #26	B3GALT4 (ENSRFEG00010014737) #27	ENSRFEG00010014573 #28	VPS52 (ENSRFEG00010014510) #29	RING1 (ENSRFEG00010014424) #30	HSD17B8 (ENSRFEG00010014277) #31	SLC39A7 (ENSRFEG00010014223) #32	RXRB (ENSRFEG00010014125) #33	COL11A2 (ENSRFEG00010013940) #34	HLA-DPB1 (ENSRFEG00010013529) #35	HLA-DPA1 (ENSRFEG00010013424) #36	HLA-DOA (ENSRFEG00010013359) #37
Microbat	MODERN SPECIES	1613										ENSMLUG00000000948	SYNGAP1 (ENSMLUG00000012071) #16	CUTA (ENSMLUG00000012064) #17	PHF1 (ENSMLUG00000012046) #18	KIFC1 (ENSMLUG00000012031) #19	DAXX (ENSMLUG00000007551) #21	ZBTB22 (ENSMLUG00000017554) #22	TAPBP (ENSMLUG00000007536) #23	RGL2 (ENSMLUG00000007475) #24	PFDN6 (ENSMLUG00000007450) #25	WDR46 (ENSMLUG00000007398) #26	B3GALT4 (ENSMLUG00000007384) #27	ENSMLUG00000007360 ##28	VPS52 (ENSMLUG00000007294) #29	RING1 (ENSMLUG00000024412) #30	HSD17B8 (ENSMLUG00000027777) #31	SLC39A7 (ENSMLUG00000014165) #32	RXRB (ENSMLUG00000014163) #33
Megabat	MODERN SPECIES	3230															DAXX (ENSPVAG00000001915) #21	ZBTB22 (ENSPVAG00000001913) #22	TAPBP (ENSPVAG00000001912) #23	RGL2 (ENSPVAG00000001911) #24	PFDN6 (ENSPVAG00000001910) #25	WDR46 (ENSPVAG00000001905) #26	RPS18 (ENSPVAG00000001902) #28	VPS52 (ENSPVAG00000001897) #29	ENSPVAG00000001896 #30	HSD17B8 (ENSPVAG00000001893) #31	SLC39A7 (ENSPVAG00000001890) #32	RXRB (ENSPVAG00000001888) #33	COL11A2 (ENSPVAG00000001885) #34
Equus	ANCESTRAL SPECIES	10	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000161735 #19	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162112 #37	ENSGT00940000153385.b.a.b	ENSGT00860000136081
Donkey	MODERN SPECIES	28	GRM4 (ENSEASG00005020947)	MLN (ENSEASG00005020942)	LEMD2 (ENSEASG00005024496) #7	IP6K3 (ENSEASG00005020926) #8	UQCC2 (ENSEASG00005020919) #9	ITPR3 (ENSEASG00005020906) #11	ENSEASG00005020902	BAK1 (ENSEASG00005020896) #12	ZBTB9 (ENSEASG00005036178) #15	SYNGAP1 (ENSEASG00005020883) #16	ENSEASG00005020871 #17	PHF1 (ENSEASG00005020866) #18	KIFC1 (ENSEASG00005020860) #19	SMIM40 (ENSEASG00005020856) #20	DAXX (ENSEASG00005020852) #21	ZBTB22 (ENSEASG00005020850) #22	RGL2 (ENSEASG00005020835) #24	PFDN6 (ENSEASG00005035417) #25	WDR46 (ENSEASG00005020823) #26	B3GALT4 (ENSEASG00005035058) #27	RPS18 (ENSEASG00005020817) #28	VPS52 (ENSEASG00005020809) #29	RING1 (ENSEASG00005020805) #30	SLC39A7 (ENSEASG00005020798) #32	RXRB (ENSEASG00005020792) #33	COL11A2 (ENSEASG00005030115) #34	HLA-DOA (ENSEASG00005020773) #37	BRD2 (ENSEASG00005020770)	ENSEASG00005032605	HLA-DMA (ENSEASG00005020764)	HLA-DMB (ENSEASG00005020759)
Horse	MODERN SPECIES	12	GRM4 (ENSECAG00000016306)	MLN (ENSECAG00000014006)	LEMD2 (ENSECAG00000012707) #7	IP6K3 (ENSECAG00000009417) #8	ENSECAG00000052831	ENSECAG00000031664	ITPR3 (ENSECAG00000007328) #11	BAK1 (ENSECAG00000023902) #12	GGNBP1 (ENSECAG00000004978)	ZBTB9 (ENSECAG00000001767) #15	SYNGAP1 (ENSECAG00000020868) #16	CUTA (ENSECAG00000016206) #17	PHF1 (ENSECAG00000001042) #18	KIFC1 (ENSECAG00000024196) #19	DAXX (ENSECAG00000021055) #21	ZBTB22 (ENSECAG00000019536) #22	TAPBP (ENSECAG00000015448) #23	RGL2 (ENSECAG00000000906) #24	PFDN6 (ENSECAG00000055205) #25	WDR46 (ENSECAG00000016548) #26	B3GALT4 (ENSECAG00000052593) #27	VPS52 (ENSECAG00000019702) #29	RING1 (ENSECAG00000013736) #30	HSD17B8 (ENSECAG00000058465) #31	SLC39A7 (ENSECAG00000004794) #32	RXRB (ENSECAG00000023041) #33	COL11A2 (ENSECAG00000029028) #34	HLA-DOA (ENSECAG00000006603) #37	BRD2 (ENSECAG00000012089)	ENSECAG00000042051	HLA-DMA (ENSECAG00000003669)
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000157882	ENSGT01050000247851	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498.r #36	ENSGT00940000162112 #37
Afrotheria	ANCESTRAL SPECIES	83	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00520000061205	ENSGT00520000057851	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498.r #36	ENSGT00940000162112 #37
Afrotheria_a	ANCESTRAL SPECIES	84	ENSGT00940000157882	ENSGT01050000247851	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.d ##28	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000162390 #35	ENSGT00940000162498.r #36
Elephant	MODERN SPECIES	14	NUDT3 (ENSLAFG00000008940)	HMGA1 (ENSLAFG00000028445)	GRM4 (ENSLAFG00000026679)	MLN (ENSLAFG00000012163)	LEMD2 (ENSLAFG00000012159) #7	IP6K3 (ENSLAFG00000012157) #8	UQCC2 (ENSLAFG00000008206) #9	ITPR3 (ENSLAFG00000022216) #11	ENSLAFG00000001449	BAK1 (ENSLAFG00000001446) #12	ZBTB9 (ENSLAFG00000020986) #15	SYNGAP1 (ENSLAFG00000007848) #16	CUTA (ENSLAFG00000005876) #17	PHF1 (ENSLAFG00000005870) #18	DAXX (ENSLAFG00000027595) #21	ZBTB22 (ENSLAFG00000018510) #22	TAPBP (ENSLAFG00000032520) #23	RGL2 (ENSLAFG00000022913) #24	PFDN6 (ENSLAFG00000012967) #25	WDR46 (ENSLAFG00000012958) #26	B3GALT4 (ENSLAFG00000025898) #27	ENSLAFG00000032173 ##28	VPS52 (ENSLAFG00000004472) #29	RING1 (ENSLAFG00000021706) #30	HSD17B8 (ENSLAFG00000030087) #31	SLC39A7 (ENSLAFG00000002138) #32	RXRB (ENSLAFG00000002141) #33	COL11A2 (ENSLAFG00000009548) #34	ENSLAFG00000029575 #35	HLA-DOA (ENSLAFG00000014863) #37	BRD2 (ENSLAFG00000016104)
Hyrax	MODERN SPECIES	1096															ENSPCAG00000006326 #21	ZBTB22 (ENSPCAG00000006256) #22	TAPBP (ENSPCAG00000006167) #23	RGL2 (ENSPCAG00000006055) #24	PFDN6 (ENSPCAG00000006019) #25	WDR46 (ENSPCAG00000005923) #26	B3GALT4 (ENSPCAG00000005914) #27	RPS18 (ENSPCAG00000005854) #28	VPS52 (ENSPCAG00000005741) #29
Tenrec	MODERN SPECIES	1426															ENSETEG00000002953 #21	ZBTB22 (ENSETEG00000002948) #22	TAPBP (ENSETEG00000002944) #23
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT01100000263519.A.b.a.b	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Opossum	MODERN SPECIES	1	ENSMODG00000013983	ENSMODG00000048209 #7	ENSMODG00000013987 #7	IP6K3 (ENSMODG00000013993) #8	UQCC2 (ENSMODG00000013996) #9	ITPR3 (ENSMODG00000014069) #11	ENSMODG00000014083	BAK1 (ENSMODG00000014089) #12	ZBTB9 (ENSMODG00000014092) #15	SYNGAP1 (ENSMODG00000014104) #16	ENSMODG00000025679 #17	PHF1 (ENSMODG00000014121) #18	ENSMODG00000014132	SMIM40 (ENSMODG00000041725) #20	DAXX (ENSMODG00000014146) #21	ZBTB22 (ENSMODG00000014152) #22	TAPBP (ENSMODG00000014159) #23	RGL2 (ENSMODG00000014185) #24	PFDN6 (ENSMODG00000014191) #25	WDR46 (ENSMODG00000014202) #26	B3GALT4 (ENSMODG00000023738) #27	RPS18 (ENSMODG00000014210) #28	ENSMODG00000029559	ENSMODG00000044597	RING1 (ENSMODG00000014169) #30	HSD17B8 (ENSMODG00000014232) #31	ENSMODG00000014239	RXRB (ENSMODG00000014249) #33	BRD2 (ENSMODG00000014295)	ENSMODG00000029544	HLA-DMB (ENSMODG00000014310)
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT01100000263519.A.b.a.b	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Diprotodontia	ANCESTRAL SPECIES	44	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29	ENSGT01100000263519.A.b.a.b	ENSGT00940000161022 #30	ENSGT00940000160668 #31	ENSGT00940000160076 #32	ENSGT00940000159208.B #33	ENSGT00940000159762 #34	ENSGT00940000153385.b.a.b	ENSGT00940000161157
Wallaby	MODERN SPECIES	139															DAXX (ENSMEUG00000002699) #21	ENSMEUG00000002692 #22
Diprotodontia_a	ANCESTRAL SPECIES	49	ENSGT01030000234648.a.b.a.a.a	ENSGT00390000000489	ENSGT00940000160955 #7	ENSGT00940000160887 #8	ENSGT00510000048041 #9	ENSGT00940000157078 #11	ENSGT00390000006663	ENSGT01090000260100.A #12	ENSGT00940000162408 #15	ENSGT00940000158438 #16	ENSGT00390000017030.b.b #17	ENSGT00950000183180.a.b #18	ENSGT00940000164565	ENSGT00920000150736 #20	ENSGT00390000009448 #21	ENSGT00940000160991 #22	ENSGT00940000159200 #23	ENSGT00940000161403 #24	ENSGT00390000010512 #25	ENSGT00390000007075 #26	ENSGT00940000161798 #27	ENSGT00390000012691.c.b #28	ENSGT00390000008815 #29
koala	MODERN SPECIES	76	GRM4 (ENSPCIG00000036938)	MLN (ENSPCIG00000012512)	LEMD2 (ENSPCIG00000012513) #7	IP6K3 (ENSPCIG00000024478) #8	ENSPCIG00000035005 #9	ITPR3 (ENSPCIG00000016569) #11	ENSPCIG00000014453	BAK1 (ENSPCIG00000035728) #12	ZBTB9 (ENSPCIG00000030149) #15	SYNGAP1 (ENSPCIG00000030140) #16	CUTA (ENSPCIG00000030134) #17	PHF1 (ENSPCIG00000030129) #18	ENSPCIG00000030126	SMIM40 (ENSPCIG00000030125) #20	DAXX (ENSPCIG00000030119) #21	ZBTB22 (ENSPCIG00000030117) #22	RGL2 (ENSPCIG00000030063) #24	PFDN6 (ENSPCIG00000030045) #25	WDR46 (ENSPCIG00000030010) #26	B3GALT4 (ENSPCIG00000030043) #27	RPS18 (ENSPCIG00000030008) #28	VPS52 (ENSPCIG00000030007) #29
Common wonbat	MODERN SPECIES	1047	SMIM29 (ENSVURG00010016385)	GRM4 (ENSVURG00010016218)	MLN (ENSVURG00010016193)	ENSVURG00010016182 #7	IP6K3 (ENSVURG00010016173) #8	ENSVURG00010016152 #9	ITPR3 (ENSVURG00010016061) #11	ENSVURG00010016031	BAK1 (ENSVURG00010016019) #12	SYNGAP1 (ENSVURG00010015312) #16	CUTA (ENSVURG00010015262) #17	PHF1 (ENSVURG00010015194) #18	ENSVURG00010015167	SMIM40 (ENSVURG00010015158) #20	DAXX (ENSVURG00010015143) #21	ZBTB22 (ENSVURG00010015135) #22	ENSVURG00010015107 #23	RGL2 (ENSVURG00010015079) #24	PFDN6 (ENSVURG00010015063) #25	WDR46 (ENSVURG00010015047) #26	B3GALT4 (ENSVURG00010015041) #27	RPS18 (ENSVURG00010015031) ##28	VPS52 (ENSVURG00010015001) #29	RING1 (ENSVURG00010014982) #30	ENSVURG00010014948	RXRB (ENSVURG00010014890) #33	ENSVURG00010014883 #34	BRD2 (ENSVURG00010014869)	HLA-DMA (ENSVURG00010014861)	HLA-DMB (ENSVURG00010014847)	ENSVURG00010014320
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000026467	GRM4 (ENSSHAG00000026932)	MLN (ENSSHAG00000031254)	ENSSHAG00000028642 #7	IP6K3 (ENSSHAG00000007830) #8	UQCC2 (ENSSHAG00000007481) #9	ITPR3 (ENSSHAG00000006269) #11	ENSSHAG00000005349	BAK1 (ENSSHAG00000028586) #12	ZBTB9 (ENSSHAG00000027893) #15	SYNGAP1 (ENSSHAG00000002507) #16	CUTA (ENSSHAG00000002227) #17	ENSSHAG00000001198	PHF1 (ENSSHAG00000021541) #18	DAXX (ENSSHAG00000007459) #21	ZBTB22 (ENSSHAG00000007426) #22	TAPBP (ENSSHAG00000025584) #23	RGL2 (ENSSHAG00000007263) #24	ENSSHAG00000023999 #25	ENSSHAG00000030383 ##28	ENSSHAG00000022792 #31	RXRB (ENSSHAG00000006089) #33	COL11A2 (ENSSHAG00000005537) #34	BRD2 (ENSSHAG00000001150)	HLA-DMB (ENSSHAG00000003762)	HLA-DMA (ENSSHAG00000003851)	ENSSHAG00000001982	ENSSHAG00000003189	PBX2 (ENSSHAG00000030132)	AGER (ENSSHAG00000022656)	RNF5 (ENSSHAG00000030853)
Platypus	MODERN SPECIES	86	ENSOANG00000009112	ENSOANG00000046016	ENSOANG00000015643	ENSOANG00000037190	ENSOANG00000005224	TAP2 (ENSOANG00000004283)	PSMB8 (ENSOANG00000014541)	TAP1 (ENSOANG00000021021)	PSMB9 (ENSOANG00000041248)	ENSOANG00000044768	ENSOANG00000003398	ENSOANG00000046093	ENSOANG00000045669	BRD2 (ENSOANG00000040477)	ENSOANG00000043668 #21	ENSOANG00000042230 #22	ENSOANG00000036542 #23	RGL2 (ENSOANG00000047778) #24	PFDN6 (ENSOANG00000046144) #25	ENSOANG00000049916 #26	B3GALT4 (ENSOANG00000043293) #27	RPS18 (ENSOANG00000036297) ##28