Neopterygii	ANCESTRAL SPECIES	422																ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27
Osteoglossocephalai	ANCESTRAL SPECIES	87								ENSGT00530000063691.b	ENSGT00390000008657	ENSGT00390000010017	ENSGT00940000160771	ENSGT00390000013834	ENSGT00940000165258	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00640000091486.b	ENSGT00940000165960.a.a ##30	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b	ENSGT00940000165987	ENSGT00390000018418
Clupeocephala	ANCESTRAL SPECIES	50			ENSGT00940000169954	ENSGT00600000085600	ENSGT00390000013368	ENSGT00510000047760	ENSGT01070000254383	ENSGT00940000180688	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b	ENSGT00940000165987	ENSGT00390000018418	ENSGT00440000037582
Euteleosteomorpha	ANCESTRAL SPECIES	80	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT00940000154838.A.f.b.b	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b	ENSGT00940000165987	ENSGT00390000018418
Acanthomorphata	ANCESTRAL SPECIES	74	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30
Euacanthomorphacea	ANCESTRAL SPECIES	17	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Percomorphaceae	ANCESTRAL SPECIES	18	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Carangaria	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36	ENSGT00940000167169 #37
Pleuronectoidei	ANCESTRAL SPECIES	17	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36	ENSGT00940000167169 #37
Turbot	MODERN SPECIES	11	shbg (ENSSMAG00000009098) #7	ENSSMAG00000008874 #8	ENSSMAG00000008790 #9	ENSSMAG00000008739 #10	ENSSMAG00000008693 #11	ENSSMAG00000008599 #11	ENSSMAG00000008560 #12	ENSSMAG00000008546 #13	ENSSMAG00000008475	ENSSMAG00000008428 #15	ENSSMAG00000008415 #16	acap1 (ENSSMAG00000008356) #17	agfg2 (ENSSMAG00000008266) #18	ENSSMAG00000008255 #19	si:ch73-335l21.2 (ENSSMAG00000008249) #21	dvl2 (ENSSMAG00000008231) #22	acadvl (ENSSMAG00000008208) #23	ENSSMAG00000008220 #24	ponzr1 (ENSSMAG00000008190) #25	ENSSMAG00000008158 #26	ENSSMAG00000008156 #27	cnpy4 (ENSSMAG00000008141) #28	ENSSMAG00000008116 #29	ENSSMAG00000022292 #30	ENSSMAG00000008076 #31	ENSSMAG00000008060 #32	RELL1 (ENSSMAG00000008051) #33	ENSSMAG00000008047 #34	NWD2 (ENSSMAG00000008034) #35	ENSSMAG00000007944 #36	ENSSMAG00000007911 #37
Tongue sole	MODERN SPECIES		exoc6b (ENSCSEG00000000942)	znhit1 (ENSCSEG00000000948)	ENSCSEG00000000955 #9	ENSCSEG00000000975 #10	ENSCSEG00000000984 #11	ENSCSEG00000001012 #11	ENSCSEG00000001026 #12	ENSCSEG00000001031 #13	ENSCSEG00000001037 #14	BCL6B (ENSCSEG00000001042) #15	acap1 (ENSCSEG00000001053) #17	SLC16A13 (ENSCSEG00000001061) #16	agfg2 (ENSCSEG00000001062) #18	si:ch73-335l21.4 (ENSCSEG00000001069) #20	si:ch73-335l21.2 (ENSCSEG00000001075) #21	dvl2 (ENSCSEG00000001081) #22	acadvl (ENSCSEG00000001165) #23	ENSCSEG00000001185	ponzr1 (ENSCSEG00000001188) #25	ENSCSEG00000001189 #26	ENSCSEG00000001197	ENSCSEG00000001203	ENSCSEG00000001213 #27	cnpy4 (ENSCSEG00000001284) #28	ENSCSEG00000001293 #29	ENSCSEG00000001301 #30	pcolceb (ENSCSEG00000001304) #31	per1b (ENSCSEG00000001323) #32	rell1 (ENSCSEG00000001341) #33	ENSCSEG00000001346 #34	NWD2 (ENSCSEG00000001352) #35
Carangaria_A	ANCESTRAL SPECIES	26	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36	ENSGT00940000167169 #37
Barramundi perch	MODERN SPECIES	151													ENSLCAG00010016910 #19	si:ch73-335l21.4 (ENSLCAG00010016904) #20	si:ch73-335l21.2 (ENSLCAG00010016903) #21	dvl2 (ENSLCAG00010016889) #22	acadvl (ENSLCAG00010016480) #23	ENSLCAG00010016401 #24	ponzr1 (ENSLCAG00010016398) #25	ENSLCAG00010016393 #26	ENSLCAG00010016381 #27	cnpy4 (ENSLCAG00010016374) #28	ENSLCAG00010016372 #29	ENSLCAG00010016369 #30	ENSLCAG00010016365 #30	pcolceb (ENSLCAG00010016358) #31	per1b (ENSLCAG00010016329) #32	ENSLCAG00010016312	rell1 (ENSLCAG00010016305) #33	ENSLCAG00010016303 #34	NWD2 (ENSLCAG00010016298) #35
Seriola	ANCESTRAL SPECIES	66	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.t #11	ENSGT00940000166283.s #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36	ENSGT00940000167169 #37
Greater amberjack	MODERN SPECIES	117	NEURL4 (ENSSDUG00000020615) #8	ENSSDUG00000020694 #9	ENSSDUG00000020747 #10	zpax4 (ENSSDUG00000020766) #11	zpax4 (ENSSDUG00000020791) #11	ENSSDUG00000020822 #12	ENSSDUG00000020858 #13	ENSSDUG00000020867 #14	BCL6B (ENSSDUG00000020890) #15	SLC16A13 (ENSSDUG00000020904) #16	acap1 (ENSSDUG00000020937) #17	agfg2 (ENSSDUG00000021169) #18	ENSSDUG00000021213 #19	si:ch73-335l21.4 (ENSSDUG00000021252) #20	si:ch73-335l21.2 (ENSSDUG00000021254) #21	dvl2 (ENSSDUG00000021261) #22	acadvl (ENSSDUG00000021300) #23	ENSSDUG00000021350 #24	ponzr1 (ENSSDUG00000021358) #25	ENSSDUG00000021364 #26	ENSSDUG00000021383 #27	cnpy4 (ENSSDUG00000021387) #28	ENSSDUG00000021396 #29	ENSSDUG00000021412 #30	pcolceb (ENSSDUG00000021425) #31	per1b (ENSSDUG00000021452) #32	rell1 (ENSSDUG00000021532) #33	ENSSDUG00000021538 #34	NWD2 (ENSSDUG00000021550) #35	DTHD1 (ENSSDUG00000021571) #36	ENSSDUG00000021586 #37
Yellowtail amberjack	MODERN SPECIES	3023	NEURL4 (ENSSLDG00000020750) #8	ENSSLDG00000020807 #9	ENSSLDG00000020863 #10	zpax4 (ENSSLDG00000020902) #11	zpax4 (ENSSLDG00000021045) #11	ENSSLDG00000021081 #12	ENSSLDG00000021115 #13	ENSSLDG00000021125 #14	ENSSLDG00000021148 #15	SLC16A13 (ENSSLDG00000021211) #16	acap1 (ENSSLDG00000021232) #17	agfg2 (ENSSLDG00000021280) #18	ENSSLDG00000021318 #19	si:ch73-335l21.4 (ENSSLDG00000021327) #20	si:ch73-335l21.2 (ENSSLDG00000021331) #21	dvl2 (ENSSLDG00000021340) #22	acadvl (ENSSLDG00000021367) #23	ENSSLDG00000021442 #24	ponzr1 (ENSSLDG00000021451) #25	ENSSLDG00000021519 #27	cnpy4 (ENSSLDG00000022035) #28	ENSSLDG00000022088 #29	ENSSLDG00000022215 #30	pcolceb (ENSSLDG00000022227) #31	per1b (ENSSLDG00000022250) #32	rell1 (ENSSLDG00000022313) #33	ENSSLDG00000022324 #34	NWD2 (ENSSLDG00000022343) #35	DTHD1 (ENSSLDG00000022370) #36	ENSSLDG00000022450 #37	PCDH7 (ENSSLDG00000022483)
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00940000161268.l	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.b #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Anabantoidei	ANCESTRAL SPECIES	24	ENSGT00940000161268.l	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Climbing perch	MODERN SPECIES	9	ENSATEG00000019644	ENSATEG00000027847	shbg (ENSATEG00000030089) #7	ENSATEG00000019768 #8	ENSATEG00000019877 #9	ENSATEG00000019994 #10	ENSATEG00000020092 #13	ENSATEG00000020103 #14	ENSATEG00000020121 #15	ENSATEG00000020132 #16	acap1 (ENSATEG00000020155) #17	agfg2 (ENSATEG00000027183) #18	ENSATEG00000020267 #19	si:ch73-335l21.4 (ENSATEG00000020316) #20	si:ch73-335l21.2 (ENSATEG00000020324) #21	dvl2 (ENSATEG00000029535) #22	acadvl (ENSATEG00000000024) #23	ENSATEG00000000171 #24	ponzr1 (ENSATEG00000025198) #25	ponzr1 (ENSATEG00000028327) #25	ponzr1 (ENSATEG00000000277) #25	ENSATEG00000030189	ENSATEG00000000290 #26	ENSATEG00000000297 #27	cnpy4 (ENSATEG00000000305) #28	ENSATEG00000000312 #29	ENSATEG00000000331 #30	ENSATEG00000028316	ENSATEG00000000342 #31	ENSATEG00000000356 #32	RELL1 (ENSATEG00000000367) #33
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000009056	shbg (ENSBSLG00000008946) #7	ENSBSLG00000008162 #9	ENSBSLG00000008144 #10	zpax4 (ENSBSLG00000008099) #11	zpax4 (ENSBSLG00000008086) #11	ENSBSLG00000008072 #13	ENSBSLG00000008057 #14	BCL6B (ENSBSLG00000008043) #15	SLC16A13 (ENSBSLG00000008024) #16	acap1 (ENSBSLG00000007907) #17	ENSBSLG00000007800	ENSBSLG00000007752 #19	si:ch73-335l21.4 (ENSBSLG00000007731) #20	si:ch73-335l21.2 (ENSBSLG00000007707) #21	dvl2 (ENSBSLG00000007703) #22	acadvl (ENSBSLG00000006887) #23	ENSBSLG00000005778 #24	ponzr1 (ENSBSLG00000005772) #25	ponzr1 (ENSBSLG00000005759) #25	ENSBSLG00000005661 #26	ENSBSLG00000005631 #27	cnpy4 (ENSBSLG00000005604) #28	ENSBSLG00000005514 #29	ENSBSLG00000005463 #30	ENSBSLG00000005443 #30	ENSBSLG00000005381 #30	ENSBSLG00000005348	pcolceb (ENSBSLG00000005246) #31	per1b (ENSBSLG00000004934) #32	rell1 (ENSBSLG00000004861) #33
Zig-zag eel	MODERN SPECIES	9	ENSMAMG00000003351	ENSMAMG00000003283	shbg (ENSMAMG00000003273) #7	ENSMAMG00000003141 #8	ENSMAMG00000003035 #9	ENSMAMG00000003016 #10	ENSMAMG00000002955 #11	ENSMAMG00000002891 #14	ENSMAMG00000002865 #15	ENSMAMG00000002851 #16	acap1 (ENSMAMG00000002823) #17	agfg2 (ENSMAMG00000002798) #18	ENSMAMG00000002780 #19	si:ch73-335l21.4 (ENSMAMG00000002769) #20	si:ch73-335l21.2 (ENSMAMG00000002760) #21	dvl2 (ENSMAMG00000002751) #22	acadvl (ENSMAMG00000002689) #23	ENSMAMG00000002674 #24	ponzr1 (ENSMAMG00000027885) #25	ENSMAMG00000002637 #26	ENSMAMG00000002287 #27	ENSMAMG00000001953	cnpy4 (ENSMAMG00000001907) #28	ENSMAMG00000001649 #29	ENSMAMG00000025692 #30	ENSMAMG00000001473 #31	ENSMAMG00000001379 #32	RELL1 (ENSMAMG00000001360) #33	ENSMAMG00000025977 #34	NWD2 (ENSMAMG00000001275) #35	ENSMAMG00000001243 #36
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Tetraodontidae	ANCESTRAL SPECIES	29	ENSGT00940000175986	ENSGT00940000159305	ENSGT00930000151033	ENSGT00940000161268	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36	ENSGT00940000167169 #37
Fugu	MODERN SPECIES	20	capgb (ENSTRUG00000024547)	POLR2A (ENSTRUG00000012320)	ENSTRUG00000012490	shbg (ENSTRUG00000012563) #7	NEURL4 (ENSTRUG00000012632) #8	ENSTRUG00000012888 #9	ARHGEF15 (ENSTRUG00000013120) #10	ENSTRUG00000032936	ENSTRUG00000013176 #14	BCL6B (ENSTRUG00000013220) #15	SLC16A13 (ENSTRUG00000013229) #16	acap1 (ENSTRUG00000013366) #17	agfg2 (ENSTRUG00000023818) #18	ENSTRUG00000023735 #19	si:ch73-335l21.4 (ENSTRUG00000025549) #20	dvl2 (ENSTRUG00000013550) #22	acadvl (ENSTRUG00000013710) #23	ENSTRUG00000013893 #24	ponzr1 (ENSTRUG00000013896) #25	ENSTRUG00000027326 ##26	ENSTRUG00000014066 #27	cnpy4 (ENSTRUG00000014142) #28	ENSTRUG00000014351	ENSTRUG00000028673	pcolceb (ENSTRUG00000014354) #31	per1b (ENSTRUG00000014420) #32	rell1 (ENSTRUG00000022108) #33	ENSTRUG00000021077 #34	NWD2 (ENSTRUG00000014613) #35	ENSTRUG00000014629 #36	ENSTRUG00000014635 #37
Tetraodon	MODERN SPECIES	14	ctdnep1a (ENSTNIG00000010142)	phf23b (ENSTNIG00000010143)	plscr3b (ENSTNIG00000010144)	tnk1 (ENSTNIG00000010145)	trmt44 (ENSTNIG00000010146)	GPR78 (ENSTNIG00000010147)	CPZ (ENSTNIG00000010148)	ENSTNIG00000010149	HMX1 (ENSTNIG00000010150)	ADRA2C (ENSTNIG00000010151)	SLC16A13 (ENSTNIG00000010152) #16	acap1 (ENSTNIG00000010153) #17	agfg2 (ENSTNIG00000010154) #18	ENSTNIG00000002043 #19	ENSTNIG00000010155	dvl2 (ENSTNIG00000010156) #22	acadvl (ENSTNIG00000010157) #23	ENSTNIG00000001266	ponzr1 (ENSTNIG00000010158) #25	ENSTNIG00000010159 #26	ENSTNIG00000010160 #27	cnpy4 (ENSTNIG00000006854) #28	ENSTNIG00000006853 #29	ENSTNIG00000006852	pcolceb (ENSTNIG00000006851) #31	ENSTNIG00000007200 #30	pcolceb (ENSTNIG00000007199) #31	per1b (ENSTNIG00000007198) #32	rell1 (ENSTNIG00000007197) #33	ENSTNIG00000007196 #35	ENSTNIG00000000703 #37
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Ballan wrasse	MODERN SPECIES	23	ENSLBEG00000027855 #9	ENSLBEG00000027908 #10	zpax4 (ENSLBEG00000027932) #11	zpax4 (ENSLBEG00000027955) #11	zpax4 (ENSLBEG00000027975) #11	ENSLBEG00000028010 #12	ENSLBEG00000028059 #13	ENSLBEG00000028069 #14	BCL6B (ENSLBEG00000028080) #15	SLC16A13 (ENSLBEG00000028091) #16	acap1 (ENSLBEG00000028135) #17	ENSLBEG00000028200	ENSLBEG00000028212 #19	si:ch73-335l21.4 (ENSLBEG00000028217) #20	si:ch73-335l21.2 (ENSLBEG00000028220) #21	dvl2 (ENSLBEG00000028224) #22	acadvl (ENSLBEG00000028251) #23	ENSLBEG00000028272 #24	ponzr1 (ENSLBEG00000028275) #25	ENSLBEG00000028280 #26	ENSLBEG00000028290 #27	ENSLBEG00000028302	cnpy4 (ENSLBEG00000028306) #28	ENSLBEG00000028314 #29	per1b (ENSLBEG00000028344) #32	ENSLBEG00000028352 #30	ENSLBEG00000028354 #30	ENSLBEG00000028355 #30	pcolceb (ENSLBEG00000028362) #31	rell1 (ENSLBEG00000028367) #33	ENSLBEG00000028381
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Eupecaria_C	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	19	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
European seabass	MODERN SPECIES	16	ENSDLAG00005009038	shbg (ENSDLAG00005009083) #7	ENSDLAG00005009114 #8	ENSDLAG00005009415 #9	ENSDLAG00005011572 #10	ENSDLAG00005017192 #11	ENSDLAG00005011650 #11	ENSDLAG00005011670 #12	ENSDLAG00005011689 #14	ENSDLAG00005011710 #15	ENSDLAG00005011717 #16	acap1 (ENSDLAG00005011773) #17	agfg2 (ENSDLAG00005035081) #18	si:ch73-335l21.4 (ENSDLAG00005027260) #20	si:ch73-335l21.2 (ENSDLAG00005013123) #21	dvl2 (ENSDLAG00005013146) #22	acadvl (ENSDLAG00005013699) #23	ENSDLAG00005014883 #24	ENSDLAG00005033537	ponzr1 (ENSDLAG00005030607) #25	ENSDLAG00005014891 #26	ENSDLAG00005029560 #27	ENSDLAG00005014916	cnpy4 (ENSDLAG00005014925) #28	ENSDLAG00005014943 #29	ENSDLAG00005014985 #30	ENSDLAG00005015002	ENSDLAG00005015012 #31	ENSDLAG00005015065 #32	RELL1 (ENSDLAG00005031395) #33	ENSDLAG00005015789 #34
Large yellow croaker	MODERN SPECIES	485	shbg (ENSLCRG00005005640) #7	NEURL4 (ENSLCRG00005005959) #8	ENSLCRG00005006956 #9	ENSLCRG00005007293 #10	zpax4 (ENSLCRG00005007445) #11	ENSLCRG00005007632 #12	ENSLCRG00005007684 #13	ENSLCRG00005007700 #14	ENSLCRG00005007717 #15	SLC16A13 (ENSLCRG00005007720) #16	acap1 (ENSLCRG00005007818) #17	agfg2 (ENSLCRG00005007925) #18	ENSLCRG00005007958 #19	si:ch73-335l21.4 (ENSLCRG00005007990) #20	si:ch73-335l21.2 (ENSLCRG00005008004) #21	dvl2 (ENSLCRG00005008034) #22	acadvl (ENSLCRG00005008338) #23	ENSLCRG00005009390 #24	ponzr1 (ENSLCRG00005009426) #25	ponzr1 (ENSLCRG00005009455) #25	ENSLCRG00005009470 #26	ENSLCRG00005009490 #27	ENSLCRG00005009516	cnpy4 (ENSLCRG00005009556) #28	ENSLCRG00005009619 #29	ENSLCRG00005009701 #30	ENSLCRG00005009713	ENSLCRG00005009723 #30	pcolceb (ENSLCRG00005009731) #31	per1b (ENSLCRG00005009853) #32	rell1 (ENSLCRG00005009951) #33
Perciformes	ANCESTRAL SPECIES	19	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370.h #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370.h #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Pike perch	MODERN SPECIES	147	shbg (ENSSLUG00000016947) #7	NEURL4 (ENSSLUG00000016363) #8	ENSSLUG00000014180 #9	ENSSLUG00000014052 #10	zpax4 (ENSSLUG00000014001) #11	ENSSLUG00000013984 #12	ENSSLUG00000013976 #13	ENSSLUG00000013967 #14	BCL6B (ENSSLUG00000013957) #15	SLC16A13 (ENSSLUG00000013953) #16	acap1 (ENSSLUG00000013809) #17	agfg2 (ENSSLUG00000013776) #18	ENSSLUG00000013770 #19	ENSSLUG00000013757 #20	si:ch73-335l21.2 (ENSSLUG00000013747) #21	dvl2 (ENSSLUG00000013613) #22	acadvl (ENSSLUG00000011111) #23	ENSSLUG00000010997 #24	ponzr1 (ENSSLUG00000010992) #25	ENSSLUG00000010984 #26	ENSSLUG00000010902 #27	ENSSLUG00000010892	cnpy4 (ENSSLUG00000010885) #28	ENSSLUG00000010870 #29	ENSSLUG00000010865 #30	pcolceb (ENSSLUG00000010820) #31	per1b (ENSSLUG00000010714) #32	ENSSLUG00000010678
Channel bull blenny	MODERN SPECIES	9	ENSCGOG00000007275	shbg (ENSCGOG00000007281) #7	NEURL4 (ENSCGOG00000007296) #8	ENSCGOG00000007484 #9	ENSCGOG00000007951 #10	ENSCGOG00000007967 #12	ENSCGOG00000007979 #14	ENSCGOG00000007986 #13	BCL6B (ENSCGOG00000007989) #15	SLC16A13 (ENSCGOG00000007991) #16	acap1 (ENSCGOG00000008011) #17	agfg2 (ENSCGOG00000008274) #18	ENSCGOG00000008276 #19	si:ch73-335l21.4 (ENSCGOG00000008281) #20	si:ch73-335l21.2 (ENSCGOG00000008284) #21	dvl2 (ENSCGOG00000008312) #22	acadvl (ENSCGOG00000008965) #23	ENSCGOG00000009793 #24	ponzr1 (ENSCGOG00000009796) #25	ENSCGOG00000009802 #26	ENSCGOG00000009809 #27	cnpy4 (ENSCGOG00000009825) #28	ENSCGOG00000009835 #29	ENSCGOG00000009900 #30	pcolceb (ENSCGOG00000009905) #31	per1b (ENSCGOG00000009956) #32	rell1 (ENSCGOG00000010169) #33	ENSCGOG00000010170 #34	NWD2 (ENSCGOG00000010171) #35	ENSCGOG00000010175 #36	ENSCGOG00000010182 #37
Cottioidei	ANCESTRAL SPECIES	20	ENSGT00930000151033	ENSGT00940000161268	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370.h #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Lumpfish	MODERN SPECIES	9	POLR2A (ENSCLMG00005014945)	ENSCLMG00005014943	shbg (ENSCLMG00005014942) #7	NEURL4 (ENSCLMG00005014940) #8	ENSCLMG00005012986 #9	ENSCLMG00005012963 #10	ENSCLMG00005012959 #13	ENSCLMG00005012957 #14	BCL6B (ENSCLMG00005012956) #15	SLC16A13 (ENSCLMG00005012954) #16	acap1 (ENSCLMG00005012923) #17	agfg2 (ENSCLMG00005012922) #18	ENSCLMG00005012921 #19	si:ch73-335l21.4 (ENSCLMG00005012920) #20	si:ch73-335l21.2 (ENSCLMG00005012919) #21	dvl2 (ENSCLMG00005012796) #22	ENSCLMG00005012650	ENSCLMG00005012505	ENSCLMG00005012504	ENSCLMG00005012502	ENSCLMG00005012463	PTGDR2 (ENSCLMG00005012461)	ENSCLMG00005012460	ugt5g2 (ENSCLMG00005012459)	ponzr3 (ENSCLMG00005012458)	ENSCLMG00005012456	cldn7a (ENSCLMG00005012455)	chrnb1l (ENSCLMG00005012401)	chrnb1 (ENSCLMG00005012312)	fgf11a (ENSCLMG00005012311)	tmem102 (ENSCLMG00005012310)
Stickleback	MODERN SPECIES	7	capgb (ENSGACG00000019370)	POLR2A (ENSGACG00000019366)	shbg (ENSGACG00000019365) #7	NEURL4 (ENSGACG00000019362) #8	ENSGACG00000019361 #9	ENSGACG00000019360	ENSGACG00000019358 #10	ENSGACG00000019355	ENSGACG00000019354	ENSGACG00000019350 #14	BCL6B (ENSGACG00000019349) #15	SLC16A13 (ENSGACG00000019347) #16	acap1 (ENSGACG00000019339) #17	ENSGACG00000019338 #19	ENSGACG00000019337 #19	dvl2 (ENSGACG00000019331) #22	acadvl (ENSGACG00000019329) #23	ENSGACG00000019328 #24	ponzr1 (ENSGACG00000019326) #25	ponzr1 (ENSGACG00000019324) #25	ENSGACG00000019319 #26	ENSGACG00000019318 #27	cnpy4 (ENSGACG00000019316) #28	ENSGACG00000019314 #29	pcolceb (ENSGACG00000019312) #31	per1b (ENSGACG00000019308) #32	RELL1 (ENSGACG00000019306) #33	NWD2 (ENSGACG00000019305) #35	ENSGACG00000019304 #35	DTHD1 (ENSGACG00000019301) #36	ENSGACG00000019300
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Cichlidae	ANCESTRAL SPECIES	20	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a #25	ENSGT00940000163927.a.a.r #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00990000204615	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Pseudocrenilabrinae	ANCESTRAL SPECIES	18	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a.a.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a.a #25	ENSGT00940000163927.a.a.q.b.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.b.b #25	ENSGT00940000163927.a.a.q.a #25	ENSGT00940000163927.a.a.r.a.a.a #25	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b.j.b #30	ENSGT00940000165960.b.j.a #30	ENSGT00940000159305	ENSGT00940000163587.a.b.b.e.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	23	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a.a.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a.a #25	ENSGT00940000163927.a.a.q.b.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.a #25	ENSGT00940000163927.a.a.q.a #25	ENSGT00940000163927.a.a.r.a.a.a #25	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b.j.b #30	ENSGT00940000179579
Haplochromini	ANCESTRAL SPECIES	31	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000177200.a.b	ENSGT00940000177278.a.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a.a.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a.a #25	ENSGT00940000163927.a.a.q.b.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.a #25	ENSGT00940000163927.a.a.q.a #25	ENSGT00940000163927.a.a.r.a.a.b.a #25	ENSGT00940000163927.a.a.r.a.a.b.b #25	ENSGT00940000163927.a.a.r.a.b #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28
Haplochromini_A	ANCESTRAL SPECIES	35	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a.a.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a.a #25	ENSGT00940000163927.a.a.q.b.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.a #25	ENSGT00940000163927.a.a.q.a #25	ENSGT00940000163927.a.a.r.a.a.b.a #25	ENSGT00940000163927.a.a.r.a.a.b.b #25	ENSGT00940000163927.a.a.r.a.b #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28
Haplochromini_B	ANCESTRAL SPECIES	25	ENSGT00940000154035.a	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.o #11	ENSGT00940000166283.p #11	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a.q.a.a.a	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.q.b.a.a.a.a.a #25	ENSGT00940000163927.a.a.q.b.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.a.b #25	ENSGT00940000163927.a.a.q.b.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.b #25	ENSGT00940000163927.a.a.q.b.a.a.a.b.a #25	ENSGT00940000163927.a.a.q.a #25	ENSGT00940000163927.a.a.r.a.a.b.a #25	ENSGT00940000163927.a.a.r.a.a.b.b #25	ENSGT00940000163927.a.a.r.a.b #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28
Zebra mbuna	MODERN SPECIES	1106	ENSMZEG00005021484 #10	ENSMZEG00005021489 #11	zpax4 (ENSMZEG00005021496) #11	ENSMZEG00005021501 #13	ENSMZEG00005021505 #14	BCL6B (ENSMZEG00005021509) #15	ENSMZEG00005021517	ENSMZEG00005021520	ENSMZEG00005021523	ENSMZEG00005021525	SLC16A13 (ENSMZEG00005021529) #16	acap1 (ENSMZEG00005021533) #17	agfg2 (ENSMZEG00005021541) #18	ENSMZEG00005021547 #19	si:ch73-335l21.4 (ENSMZEG00005021548) #20	dvl2 (ENSMZEG00005021552) #22	acadvl (ENSMZEG00005021561) #23	ENSMZEG00005021568 #24	ENSMZEG00005021569 #25	ponzr1 (ENSMZEG00005021572) #25	ENSMZEG00005021575 #25	ponzr1 (ENSMZEG00005021577) #25	ponzr1 (ENSMZEG00005021578) #25	ENSMZEG00005021581	ponzr1 (ENSMZEG00005021585) #25	ponzr1 (ENSMZEG00005021642) #25	ponzr1 (ENSMZEG00005021645) #25	ponzr1 (ENSMZEG00005021646) #25	ENSMZEG00005021647 #26	ENSMZEG00005021650 #27	cnpy4 (ENSMZEG00005021655) #28
Eastern happy	MODERN SPECIES	15	ENSACLG00000006520 #13	ENSACLG00000006489 #14	ENSACLG00000006465 #15	ENSACLG00000006462	ENSACLG00000006457	ENSACLG00000006450	ENSACLG00000006441	ENSACLG00000006429	ENSACLG00000006416	SLC16A13 (ENSACLG00000006406) #16	acap1 (ENSACLG00000006302) #17	agfg2 (ENSACLG00000006252) #18	ENSACLG00000006244	ENSACLG00000006233 #19	si:ch73-335l21.4 (ENSACLG00000006229) #20	dvl2 (ENSACLG00000006173) #22	acadvl (ENSACLG00000006155) #23	ENSACLG00000006146 #24	ENSACLG00000006119 #25	ponzr1 (ENSACLG00000006107) #25	ponzr1 (ENSACLG00000006081) #25	ponzr1 (ENSACLG00000006076) #25	ponzr1 (ENSACLG00000006071) #25	ponzr1 (ENSACLG00000006068) #25	ponzr1 (ENSACLG00000006066) #25	ponzr1 (ENSACLG00000006062) #25	ponzr1 (ENSACLG00000006050) #25	ponzr1 (ENSACLG00000005722) #25	ENSACLG00000005711	ENSACLG00000005699 #26	ENSACLG00000005689 #27
P. nyererei	MODERN SPECIES	609	NEURL4 (ENSPNYG00000022407) #8	ENSPNYG00000022467 #9	ENSPNYG00000022522 #10	ENSPNYG00000022532 #11	zpax4 (ENSPNYG00000022542) #11	ENSPNYG00000022552 #13	ENSPNYG00000022560 #14	BCL6B (ENSPNYG00000022571) #15	ENSPNYG00000022580	SLC16A13 (ENSPNYG00000022584) #16	acap1 (ENSPNYG00000022603) #17	agfg2 (ENSPNYG00000022611) #18	ENSPNYG00000022629 #19	si:ch73-335l21.4 (ENSPNYG00000022634) #20	si:ch73-335l21.2 (ENSPNYG00000022638) #21	dvl2 (ENSPNYG00000022643) #22	acadvl (ENSPNYG00000022658) #23	ENSPNYG00000022684 #24	ENSPNYG00000022709 #25	ponzr1 (ENSPNYG00000022712) #25	ENSPNYG00000022717 #25	ponzr1 (ENSPNYG00000022721) #25	ponzr1 (ENSPNYG00000022724) #25	ponzr1 (ENSPNYG00000022730) #25	ponzr1 (ENSPNYG00000022736) #25
Burton s mouthbrooder	MODERN SPECIES	716	NEURL4 (ENSHBUG00000018681) #8	ENSHBUG00000018434 #9	ENSHBUG00000018362 #10	zpax4 (ENSHBUG00000018348) #11	zpax4 (ENSHBUG00000018241) #11	ENSHBUG00000018213 #13	ENSHBUG00000018190 #14	ENSHBUG00000018170 #15	ENSHBUG00000018155	SLC16A13 (ENSHBUG00000018123) #16	acap1 (ENSHBUG00000018093) #17	agfg2 (ENSHBUG00000017985) #18	ENSHBUG00000017939 #19	si:ch73-335l21.4 (ENSHBUG00000017907) #20	si:ch73-335l21.2 (ENSHBUG00000017898) #21	dvl2 (ENSHBUG00000017888) #22	acadvl (ENSHBUG00000017807) #23	ENSHBUG00000017747 #24	ENSHBUG00000017739 #25	ponzr1 (ENSHBUG00000017729) #25	ponzr1 (ENSHBUG00000017714) #25	ponzr1 (ENSHBUG00000017703) #25	ponzr1 (ENSHBUG00000017699) #25	ponzr1 (ENSHBUG00000017693) #25	ponzr1 (ENSHBUG00000017644) #25
Lyretail cichlid	MODERN SPECIES	372	NEURL4 (ENSNBRG00000002132) #8	ENSNBRG00000002236 #9	ARHGEF15 (ENSNBRG00000002333) #10	ENSNBRG00000002388 #11	ENSNBRG00000002447 #11	ENSNBRG00000002516 #13	ENSNBRG00000002563 #14	BCL6B (ENSNBRG00000002571) #15	ENSNBRG00000002621	SLC16A13 (ENSNBRG00000002688) #16	acap1 (ENSNBRG00000002707) #17	agfg2 (ENSNBRG00000002782) #18	ENSNBRG00000002843 #19	si:ch73-335l21.4 (ENSNBRG00000002870) #20	si:ch73-335l21.2 (ENSNBRG00000002875) #21	dvl2 (ENSNBRG00000002888) #22	acadvl (ENSNBRG00000002949) #23	ENSNBRG00000002995 #24	ENSNBRG00000003012 #25	ponzr1 (ENSNBRG00000003036) #25	ponzr1 (ENSNBRG00000003055) #25	ponzr1 (ENSNBRG00000003073) #25	ponzr1 (ENSNBRG00000003117) #25	ponzr1 (ENSNBRG00000003189) #25
Nile tilapia	MODERN SPECIES	15	ENSONIG00000037986 #10	zpax4 (ENSONIG00000006698) #11	ENSONIG00000031698 #13	ENSONIG00000004817 #14	ENSONIG00000004819 #15	ENSONIG00000007874	ENSONIG00000040467	ENSONIG00000037241	ENSONIG00000042817	SLC16A13 (ENSONIG00000004820) #16	acap1 (ENSONIG00000004822) #17	agfg2 (ENSONIG00000004827) #18	ENSONIG00000035777 #19	rnf227 (ENSONIG00000029883) #20	si:ch73-335l21.2 (ENSONIG00000041253) #21	dvl2 (ENSONIG00000004831) #22	acadvl (ENSONIG00000004837) #23	ENSONIG00000004844 #24	ENSONIG00000004845 #25	ponzr1 (ENSONIG00000027740) #25	ENSONIG00000033020 #25	ponzr1 (ENSONIG00000004851) #25	ponzr1 (ENSONIG00000037680) #25	ENSONIG00000033985	ENSONIG00000035443	ENSONIG00000027164	ENSONIG00000033948	ENSONIG00000034488	ENSONIG00000034063	ENSONIG00000036689	ENSONIG00000034338
Midas cichlid	MODERN SPECIES	1115	NEURL4 (ENSACIG00000016087) #8	ENSACIG00000016154 #9	ENSACIG00000016243 #10	zpax4 (ENSACIG00000016498) #11	ENSACIG00000016536	ENSACIG00000016561 #13	ENSACIG00000016578 #14	BCL6B (ENSACIG00000016645) #15	ENSACIG00000016670	SLC16A13 (ENSACIG00000016763) #16	acap1 (ENSACIG00000016836) #17	agfg2 (ENSACIG00000016883) #18	ENSACIG00000016904 #19	si:ch73-335l21.4 (ENSACIG00000016924) #20	si:ch73-335l21.2 (ENSACIG00000016929) #21	dvl2 (ENSACIG00000016934) #22	acadvl (ENSACIG00000016983) #23	ENSACIG00000017014 #24	ponzr1 (ENSACIG00000017024) #25	ENSACIG00000017033	ponzr1 (ENSACIG00000017048) #25	ponzr1 (ENSACIG00000017056) #25	ponzr1 (ENSACIG00000017079) #25	ENSACIG00000017091	ENSACIG00000017097	mych (ENSACIG00000017105)	mtss1 (ENSACIG00000017120)	ENSACIG00000017183	ENSACIG00000017193	ENSACIG00000017213	ENSACIG00000017228
Pomacentridae	ANCESTRAL SPECIES	62	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.m #11	ENSGT00940000166283.n #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b.l.a.b #30	ENSGT00940000165960.b.l.b #30	ENSGT00940000165960.b.l.a.a #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34
Bicolor damselfish	MODERN SPECIES	1838															si:ch73-335l21.2 (ENSSPAG00000005097) #21	dvl2 (ENSSPAG00000004859) #22	acadvl (ENSSPAG00000004797) #23	ENSSPAG00000004767 #24	ponzr1 (ENSSPAG00000004763) #25	ENSSPAG00000004729 #26	ENSSPAG00000004708 #27	ENSSPAG00000003792	cnpy4 (ENSSPAG00000003718) #28
Pomacentridae_A	ANCESTRAL SPECIES	95	ENSGT00940000165960.b.l.a.a #30	ENSGT00940000165960.b.l.b #30	ENSGT00940000165960.b.l.a.b #30	ENSGT00940000166283.m #11	ENSGT00940000166283.n #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00640000091486.a	ENSGT00940000166499	ENSGT01030000234573.B.c.b.b	ENSGT00940000159589	ENSGT00390000005147	ENSGT00600000084617	ENSGT00940000157482.e
Amphiprion	ANCESTRAL SPECIES	92	ENSGT00940000165960.b.l.a.a #30	ENSGT00940000165960.b.l.b #30	ENSGT00940000165960.b.l.a.b #30	ENSGT00940000166283.m #11	ENSGT00940000166283.n #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.p.a #25	ENSGT00940000163927.a.a.o #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00640000091486.a	ENSGT00940000166499	ENSGT01030000234573.B.c.b.b	ENSGT00940000159589	ENSGT00390000005147	ENSGT00600000084617
Clown anemonefish	MODERN SPECIES	1263			ENSAOCG00000017697 #30	zpax4 (ENSAOCG00000001235) #11	zpax4 (ENSAOCG00000001239) #11	ENSAOCG00000017748 #12	ENSAOCG00000017777 #13	ENSAOCG00000017800 #14	ENSAOCG00000017838 #15	SLC16A13 (ENSAOCG00000001254) #16	acap1 (ENSAOCG00000017878) #17	agfg2 (ENSAOCG00000017905) #18	ENSAOCG00000017944 #19	si:ch73-335l21.4 (ENSAOCG00000017956) #20	si:ch73-335l21.2 (ENSAOCG00000017963) #21	dvl2 (ENSAOCG00000018028) #22
Orange clownfish	MODERN SPECIES	15	pcolceb (ENSAPEG00000007427) #31	ENSAPEG00000007464 #30	ENSAPEG00000007474 #30	ENSAPEG00000007498 #30	zpax4 (ENSAPEG00000007523) #11	ENSAPEG00000007614 #11	ENSAPEG00000007630 #13	ENSAPEG00000007660 #14	ENSAPEG00000007673 #15	SLC16A13 (ENSAPEG00000007690) #16	acap1 (ENSAPEG00000007709) #17	agfg2 (ENSAPEG00000007814) #18	ENSAPEG00000007847 #19	si:ch73-335l21.4 (ENSAPEG00000007854) #20	si:ch73-335l21.2 (ENSAPEG00000007863) #21	dvl2 (ENSAPEG00000007874) #22	acadvl (ENSAPEG00000007921) #23	ENSAPEG00000007981 #24	ponzr1 (ENSAPEG00000007984) #25	ponzr1 (ENSAPEG00000007988) #25	ENSAPEG00000007997 #26	ENSAPEG00000008036 #27	ENSAPEG00000008372	cnpy4 (ENSAPEG00000008769) #28	ENSAPEG00000008805 #29	taf6l (ENSAPEG00000008884)	cth1 (ENSAPEG00000008930)	mta2 (ENSAPEG00000008941)	EML3 (ENSAPEG00000009039)	ecsit (ENSAPEG00000009076)	ENSAPEG00000009098
Spiny chromis	MODERN SPECIES	1289													ENSAPOG00000007565 #19	si:ch73-335l21.4 (ENSAPOG00000007538) #20	si:ch73-335l21.2 (ENSAPOG00000007534) #21	dvl2 (ENSAPOG00000007524) #22	acadvl (ENSAPOG00000007469) #23	ENSAPOG00000007455 #24	ponzr1 (ENSAPOG00000007451) #25	ENSAPOG00000007440	ENSAPOG00000007421 #26
Atherinomorphae	ANCESTRAL SPECIES	22	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Oryzias	ANCESTRAL SPECIES	21	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.k #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00940000156128.a #29	ENSGT00940000165960.b.g #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000167169 #37	ENSGT00940000157221.x
Oryzias_a	ANCESTRAL SPECIES	27	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.k #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316.c #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00940000156128.a #29	ENSGT00940000165960.b.g #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000167169 #37	ENSGT00940000157221.x
Chinese medaka	MODERN SPECIES	633	ENSOSIG00000000966	shbg (ENSOSIG00000000967) #7	ENSOSIG00000001149 #9	ENSOSIG00000001210 #10	ENSOSIG00000001214 #11	ENSOSIG00000001216 #12	ENSOSIG00000001217 #13	ENSOSIG00000001218 #14	ENSOSIG00000001219 #15	SLC16A13 (ENSOSIG00000001220) #16	acap1 (ENSOSIG00000001224) #17	ENSOSIG00000001228 #19	si:ch73-335l21.4 (ENSOSIG00000001229) #20	ENSOSIG00000001231	si:ch73-335l21.2 (ENSOSIG00000001232) #21	dvl2 (ENSOSIG00000001247) #22	acadvl (ENSOSIG00000004938) #23	ENSOSIG00000008762 #24	ponzr1 (ENSOSIG00000008763) #25
Japanese Medaka HdrR	MODERN SPECIES	9	NEURL4 (ENSORLG00000006500) #8	ENSORLG00000006581 #9	ENSORLG00000006596 #10	ENSORLG00000006604 #11	ENSORLG00000028277 #12	ENSORLG00000027240 #13	ENSORLG00000006640 #14	ENSORLG00000006659 #15	SLC16A13 (ENSORLG00000006684) #16	acap1 (ENSORLG00000006715) #17	agfg2 (ENSORLG00000006726) #18	ENSORLG00000030113 #19	ENSORLG00000030236	si:ch73-335l21.4 (ENSORLG00000029844) #20	si:ch73-335l21.2 (ENSORLG00000024682) #21	dvl2 (ENSORLG00000006771) #22	acadvl (ENSORLG00000006819) #23	ENSORLG00000006827 #24	ponzr1 (ENSORLG00000028811) #25	ENSORLG00000006846 #26	ENSORLG00000026979	ENSORLG00000006869 #27	ENSORLG00000006875	ENSORLG00000006903 #29	ENSORLG00000006910 #30	pcolceb (ENSORLG00000030017) #31	per1b (ENSORLG00000006929) #32	RELL1 (ENSORLG00000006940) #33	ENSORLG00000023698 #34	NWD2 (ENSORLG00000023423) #35	ENSORLG00000026395 #37
Oryzias_b	ANCESTRAL SPECIES	18	ENSGT00940000161268	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283.k #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00940000156128.a #29	ENSGT00940000165960.b.g #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000167169 #37	ENSGT00940000157221.x
Indian medaka	MODERN SPECIES	19	shbg (ENSOMEG00000010821) #7	NEURL4 (ENSOMEG00000010922) #8	ENSOMEG00000011131 #9	ENSOMEG00000011184 #10	zpax4 (ENSOMEG00000011305) #11	ENSOMEG00000011356 #11	ENSOMEG00000011425 #12	ENSOMEG00000011490 #14	ENSOMEG00000000272 #15	SLC16A13 (ENSOMEG00000000274) #16	acap1 (ENSOMEG00000011715) #17	agfg2 (ENSOMEG00000000285) #18	ENSOMEG00000011879 #19	si:ch73-335l21.4 (ENSOMEG00000011912) #20	si:ch73-335l21.2 (ENSOMEG00000011917) #21	dvl2 (ENSOMEG00000011978) #22	acadvl (ENSOMEG00000012058) #23	ENSOMEG00000012075 #24	ponzr1 (ENSOMEG00000012096) #25	ENSOMEG00000012137 #26	ENSOMEG00000000821 #27	ENSOMEG00000012453	ENSOMEG00000012500 #29	ENSOMEG00000012512 #30	ENSOMEG00000012530 #30	pcolceb (ENSOMEG00000012561) #31	per1b (ENSOMEG00000012728) #32	rell1 (ENSOMEG00000012793) #33	ENSOMEG00000012805 #34	NWD2 (ENSOMEG00000012880) #35	ENSOMEG00000013126 #37
Javanese ricefish	MODERN SPECIES	9	POLR2A (ENSOJAG00000015228)	ENSOJAG00000015143	shbg (ENSOJAG00000015131) #7	ENSOJAG00000014320 #9	ARHGEF15 (ENSOJAG00000014287) #10	zpax4 (ENSOJAG00000014205) #11	ENSOJAG00000014188 #12	ENSOJAG00000014097 #14	ENSOJAG00000014073 #15	SLC16A13 (ENSOJAG00000014064) #16	acap1 (ENSOJAG00000012339) #17	agfg2 (ENSOJAG00000012184) #18	ENSOJAG00000012169 #19	si:ch73-335l21.4 (ENSOJAG00000012153) #20	si:ch73-335l21.2 (ENSOJAG00000012134) #21	dvl2 (ENSOJAG00000012069) #22	acadvl (ENSOJAG00000010840) #23	ENSOJAG00000010740 #24	ponzr1 (ENSOJAG00000010731) #25	ENSOJAG00000010647 #26	ENSOJAG00000010619 #27	ENSOJAG00000010497 #29	ENSOJAG00000010485 #30	pcolceb (ENSOJAG00000011565) #31	per1b (ENSOJAG00000011505) #32	rell1 (ENSOJAG00000011495) #33	ENSOJAG00000011485 #34	NWD2 (ENSOJAG00000011479) #35	ENSOJAG00000011466	ENSOJAG00000011455	ENSOJAG00000010832 #37
Cyprinodontiformes	ANCESTRAL SPECIES	22	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163503.A.a.a.a #12	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Cyprinodontoidei	ANCESTRAL SPECIES	21	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.m #25	ENSGT00940000163927.a.a.n #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Poeciliinae	ANCESTRAL SPECIES	21	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.m #25	ENSGT00940000163927.a.a.n #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Poecilia	ANCESTRAL SPECIES	32	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.m #25	ENSGT00940000163927.a.a.n #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
NAME_6	ANCESTRAL SPECIES	53	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.m #25	ENSGT00940000163927.a.a.n #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35	ENSGT00940000153404.b #36
Amazon molly	MODERN SPECIES	293	ENSPFOG00000008187	shbg (ENSPFOG00000008200) #7	NEURL4 (ENSPFOG00000008290) #8	ENSPFOG00000008755 #9	ENSPFOG00000009127 #10	zpax4 (ENSPFOG00000009333) #11	zpax4 (ENSPFOG00000023766) #11	ENSPFOG00000009429	ENSPFOG00000009434 #14	ENSPFOG00000009503 #15	SLC16A13 (ENSPFOG00000009560) #16	acap1 (ENSPFOG00000009687) #17	agfg2 (ENSPFOG00000010128) #18	ENSPFOG00000010170 #19	si:ch73-335l21.4 (ENSPFOG00000010185) #20	dvl2 (ENSPFOG00000010190) #22	acadvl (ENSPFOG00000010335) #23	ENSPFOG00000010654 #24	ponzr1 (ENSPFOG00000010662) #25	ponzr1 (ENSPFOG00000021825) #25	ENSPFOG00000010686 #26	ENSPFOG00000010831 #27	cnpy4 (ENSPFOG00000010908) #28	ENSPFOG00000010952 #29	ENSPFOG00000011090 #30	pcolceb (ENSPFOG00000011106) #31	per1b (ENSPFOG00000011185) #32	RELL1 (ENSPFOG00000022963) #33	ENSPFOG00000020015 #34	NWD2 (ENSPFOG00000011365) #35	ENSPFOG00000011416 #36
Sailfin molly	MODERN SPECIES	149														si:ch73-335l21.4 (ENSPLAG00000018033) #20	si:ch73-335l21.2 (ENSPLAG00000018017) #21	dvl2 (ENSPLAG00000018005) #22	acadvl (ENSPLAG00000017994) #23	ENSPLAG00000017986 #24	ponzr1 (ENSPLAG00000017980) #25	ponzr1 (ENSPLAG00000017974) #25	ENSPLAG00000017959 #26	ENSPLAG00000017911 #27	cnpy4 (ENSPLAG00000017314) #28	ENSPLAG00000000393 #29	ENSPLAG00000017299 #30	pcolceb (ENSPLAG00000017294) #31	per1b (ENSPLAG00000017288) #32	ENSPLAG00000017214 #33	ENSPLAG00000017206 #34	NWD2 (ENSPLAG00000017199) #35
Guppy	MODERN SPECIES	448	shbg (ENSPREG00000013062) #7	NEURL4 (ENSPREG00000012931) #8	ENSPREG00000012848 #9	ENSPREG00000012816 #10	zpax4 (ENSPREG00000012721) #11	ENSPREG00000012700	ENSPREG00000012690 #13	ENSPREG00000012669 #14	BCL6B (ENSPREG00000012637) #15	SLC16A13 (ENSPREG00000012622) #16	acap1 (ENSPREG00000012359) #17	agfg2 (ENSPREG00000012301) #18	ENSPREG00000012280	ENSPREG00000012240 #19	si:ch73-335l21.4 (ENSPREG00000012223) #20	dvl2 (ENSPREG00000012205) #22	acadvl (ENSPREG00000012139) #23	ENSPREG00000012122 #24	ponzr1 (ENSPREG00000012099) #25	ponzr1 (ENSPREG00000012038) #25	ENSPREG00000011984 #26	ENSPREG00000011946 #27	cnpy4 (ENSPREG00000011908) #28	ENSPREG00000011778 #29	ENSPREG00000011735 #30	pcolceb (ENSPREG00000011709) #31	per1b (ENSPREG00000011641) #32	RELL1 (ENSPREG00000011610) #33	ENSPREG00000011599 #34	NWD2 (ENSPREG00000011567) #35	ENSPREG00000011525 #36
Platyfish	MODERN SPECIES	5	POLR2A (ENSXMAG00000015687)	ENSXMAG00000021013	shbg (ENSXMAG00000015677) #7	NEURL4 (ENSXMAG00000015663) #8	ENSXMAG00000015633 #9	ENSXMAG00000015629 #10	zpax4 (ENSXMAG00000015623) #11	ENSXMAG00000020934 #14	ENSXMAG00000015613 #15	SLC16A13 (ENSXMAG00000015596) #16	acap1 (ENSXMAG00000015536) #17	agfg2 (ENSXMAG00000029833) #18	ENSXMAG00000015527 #19	si:ch73-335l21.4 (ENSXMAG00000024596) #20	si:ch73-335l21.2 (ENSXMAG00000025095) #21	dvl2 (ENSXMAG00000015501) #22	acadvl (ENSXMAG00000015425) #23	ENSXMAG00000015421 #24	ponzr1 (ENSXMAG00000022829) #25	ponzr1 (ENSXMAG00000022482) #25	ENSXMAG00000015396 #26	ENSXMAG00000026871 #27	cnpy4 (ENSXMAG00000015373) #28	ENSXMAG00000015348 #29	ENSXMAG00000015347 #30	pcolceb (ENSXMAG00000027902) #31	per1b (ENSXMAG00000015314) #32	ENSXMAG00000030074	ENSXMAG00000026248	RELL1 (ENSXMAG00000015308) #33	ENSXMAG00000015305 #34
NAME_4	ANCESTRAL SPECIES	92	ENSGT00940000165567 #7	ENSGT00940000159866 #8	ENSGT00940000165211 #9	ENSGT01030000234571.b.b.a.a.b.e.a #10	ENSGT00940000166283 #11	ENSGT00940000163472.e.b	ENSGT00940000176070 #13	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a.m #25	ENSGT00940000163927.a.a.n #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT01010000222552 #34	ENSGT00940000153648.b #35
Sheepshead minnow	MODERN SPECIES	305	shbg (ENSCVAG00000005204) #7	NEURL4 (ENSCVAG00000005235) #8	ENSCVAG00000005345 #9	ENSCVAG00000005386 #10	zpax4 (ENSCVAG00000005399) #11	ENSCVAG00000005404	ENSCVAG00000005417 #13	ENSCVAG00000005434 #14	ENSCVAG00000005449 #15	SLC16A13 (ENSCVAG00000005457) #16	acap1 (ENSCVAG00000000802) #17	agfg2 (ENSCVAG00000005503) #18	ENSCVAG00000005515 #19	si:ch73-335l21.4 (ENSCVAG00000005519) #20	si:ch73-335l21.2 (ENSCVAG00000005532) #21	dvl2 (ENSCVAG00000005544) #22	acadvl (ENSCVAG00000005610) #23	ENSCVAG00000005617 #24	ponzr1 (ENSCVAG00000005629) #25	ponzr1 (ENSCVAG00000005635) #25	ponzr1 (ENSCVAG00000005648) #25	ENSCVAG00000005656 #26	ENSCVAG00000005665 #27	cnpy4 (ENSCVAG00000005696) #28	ENSCVAG00000005729 #29	ENSCVAG00000005736 #30	pcolceb (ENSCVAG00000005741) #31	per1b (ENSCVAG00000005799) #32	rell1 (ENSCVAG00000005817) #33	ENSCVAG00000005820 #34	NWD2 (ENSCVAG00000005860) #35
Mummichog	MODERN SPECIES	2336	ENSFHEG00000001701 #9	ENSFHEG00000001691 #10	zpax4 (ENSFHEG00000001684) #11	ENSFHEG00000001679 #30	ENSFHEG00000001676	ENSFHEG00000000055 #13	ENSFHEG00000001669 #14	BCL6B (ENSFHEG00000001661) #15	SLC16A13 (ENSFHEG00000001648) #16	ENSFHEG00000001644	ENSFHEG00000001642 #17	agfg2 (ENSFHEG00000001636) #18	ENSFHEG00000001626 #19	si:ch73-335l21.4 (ENSFHEG00000001620) #20	si:ch73-335l21.2 (ENSFHEG00000001618) #21	dvl2 (ENSFHEG00000001612) #22	acadvl (ENSFHEG00000001586) #23	ENSFHEG00000001575 #24	ponzr1 (ENSFHEG00000001573) #25	ENSFHEG00000001570 ##26	ENSFHEG00000001557 #27	ENSFHEG00000001550	cnpy4 (ENSFHEG00000001548) #28	ENSFHEG00000001541	ENSFHEG00000001539 #30
Aplocheiloidei	DUPLICATION
Aplocheiloidei	ANCESTRAL SPECIES	68										ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.c #22	ENSGT00950000182903.a.b.i.d #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT00940000153648.b #35	ENSGT00940000167169 #37
Turquoise killifish	MODERN SPECIES	1613	tp53 (ENSNFUG00015001875)	ENSNFUG00015001862	Nfu_g_1_014152 (ENSNFUG00015001836)	POLR2A (ENSNFUG00015001784)	ENSNFUG00015001758	shbg (ENSNFUG00015001748) #7	NEURL4 (ENSNFUG00015001727) #8	ENSNFUG00015001294 #9	ENSNFUG00015001211	SLC16A13 (ENSNFUG00015001209) #16	acap1 (ENSNFUG00015001148) #17	ENSNFUG00015001124	ENSNFUG00015001118 #19	si:ch73-335l21.4 (ENSNFUG00015001113) #20	si:ch73-335l21.2 (ENSNFUG00015001110) #21	ENSNFUG00015001106 #22	ENSNFUG00015001102 #26	ENSNFUG00015001098 #27	ENSNFUG00015001089	CNPY4 (ENSNFUG00015001081) #28	ENSNFUG00015001074 #29	OLA.1520 (ENSNFUG00015001067) #30	pcolceb (ENSNFUG00015001053) #31	per1b (ENSNFUG00015001033) #32	RELL1 (ENSNFUG00015001013) #33	NWD2 (ENSNFUG00015000999) #35	ENSNFUG00015000990	PCDH7B (ENSNFUG00015000982)	ENSNFUG00015000971	ENSNFUG00015000969	ENSNFUG00015000968
Aplocheiloidei	ANCESTRAL SPECIES	68									ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.c #22	ENSGT00950000182903.a.b.i.d #22	ENSGT00940000158535 #23	ENSGT01020000230586 #24	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000159264.f #31	ENSGT00940000159217 #32	ENSGT00940000159709 #33	ENSGT00940000153648.b #35	ENSGT00940000167169 #37	ENSGT00940000157221.x
Mangrove rivulus	MODERN SPECIES	90						ENSKMAG00000009495	ppdpfb (ENSKMAG00000009515)	ENSKMAG00000009535	nol4lb (ENSKMAG00000009573)	ENSKMAG00000009584	SLC16A13 (ENSKMAG00000009596) #16	acap1 (ENSKMAG00000009620) #17	agfg2 (ENSKMAG00000009661) #18	ENSKMAG00000009700 #19	si:ch73-335l21.2 (ENSKMAG00000009713) #21	dvl2 (ENSKMAG00000009737) #22	acadvl (ENSKMAG00000009786) #23	ENSKMAG00000009869 #24	ponzr1 (ENSKMAG00000009877) #25	ponzr1 (ENSKMAG00000009891) #25	ENSKMAG00000009901	ENSKMAG00000009927 #26	ENSKMAG00000009965 #27	ENSKMAG00000009983	cnpy4 (ENSKMAG00000010015) #28	ENSKMAG00000010035 #29	ENSKMAG00000010053 #30	ENSKMAG00000010063 #31	per1b (ENSKMAG00000010097) #32	RELL1 (ENSKMAG00000010228) #33	ENSKMAG00000010244 #34
Turquoise killifish	MODERN SPECIES	395																dvl2 (ENSNFUG00015012251) #22	ACADVL (ENSNFUG00015011984) #23	CR376787.3 (ENSNFUG00015011944) #24
Tiger tail seahorse	MODERN SPECIES	506	ENSHCOG00000011850	capgb (ENSHCOG00000011861)	POLR2A (ENSHCOG00000011874)	ENSHCOG00000011903	shbg (ENSHCOG00000011914) #7	NEURL4 (ENSHCOG00000011926) #8	ENSHCOG00000011945 #10	ENSHCOG00000011968 #11	ENSHCOG00000011977 #13	ENSHCOG00000011983 #14	BCL6B (ENSHCOG00000012012) #15	SLC16A13 (ENSHCOG00000012018) #16	acap1 (ENSHCOG00000012023) #17	agfg2 (ENSHCOG00000012027) #18	ENSHCOG00000012035 #19	dvl2 (ENSHCOG00000012079) #22	zgc:101810 (ENSHCOG00000012101)	six7 (ENSHCOG00000012114)	b4gat1 (ENSHCOG00000012128)	pfdn2 (ENSHCOG00000012134)	nit1 (ENSHCOG00000012143)	CLCN3 (ENSHCOG00000012213)	mfap3l (ENSHCOG00000012229)	AADAT (ENSHCOG00000012255)	ino80b (ENSHCOG00000012295)	intu (ENSHCOG00000012317)	cxcl19 (ENSHCOG00000012345)	trmt10b (ENSHCOG00000012351)	f13a1b (ENSHCOG00000012373)	tex261 (ENSHCOG00000012400)	vax2 (ENSHCOG00000012416)
Pinecone sodierfish	MODERN SPECIES	9	ENSMMDG00005023186	shbg (ENSMMDG00005023183) #7	NEURL4 (ENSMMDG00005023134) #8	ENSMMDG00005018080 #9	ENSMMDG00005017977 #10	zpax4 (ENSMMDG00005017972) #11	ENSMMDG00005017967 #13	ENSMMDG00005017964 #14	BCL6B (ENSMMDG00005017961) #15	SLC16A13 (ENSMMDG00005017959) #16	acap1 (ENSMMDG00005017948) #17	agfg2 (ENSMMDG00005017929) #18	ENSMMDG00005017928 #19	si:ch73-335l21.4 (ENSMMDG00005017925) #20	si:ch73-335l21.2 (ENSMMDG00005017923) #21	dvl2 (ENSMMDG00005017908) #22	acadvl (ENSMMDG00005017165) #23	ENSMMDG00005017134 #24	ponzr1 (ENSMMDG00005017133) #25	ENSMMDG00005017132 #27	ENSMMDG00005017128	cnpy4 (ENSMMDG00005017126) #28	ENSMMDG00005017042 #29	ENSMMDG00005017038 #30	pcolceb (ENSMMDG00005016990) #31	per1b (ENSMMDG00005016500) #32	rell1 (ENSMMDG00005016478) #33	ENSMMDG00005016476 #34	NWD2 (ENSMMDG00005016473) #35	DTHD1 (ENSMMDG00005016470) #36	ENSMMDG00005016277 #37
Cod	MODERN SPECIES	8	acap1 (ENSGMOG00000016844) #17	ENSGMOG00000028165	ENSGMOG00000030769	ENSGMOG00000031128	ENSGMOG00000028352	ENSGMOG00000025698	ENSGMOG00000029118	ENSGMOG00000031799	ENSGMOG00000036283	ENSGMOG00000030378	ENSGMOG00000026181	agfg2 (ENSGMOG00000016834) #18	ENSGMOG00000036442 #19	si:ch73-335l21.4 (ENSGMOG00000014164) #20	si:ch73-335l21.2 (ENSGMOG00000036358) #21	dvl2 (ENSGMOG00000014125) #22	acadvl (ENSGMOG00000014084) #23	intu (ENSGMOG00000005821)	ino80b (ENSGMOG00000005805)	ENSGMOG00000005784	mfap3l (ENSGMOG00000005769)	actn3b (ENSGMOG00000009617)	ENSGMOG00000027696	ccs (ENSGMOG00000009635)	ENSGMOG00000009644	ENSGMOG00000023814	zgc:101810 (ENSGMOG00000009710)	six7 (ENSGMOG00000009723)	b4gat1 (ENSGMOG00000009731)	nit1 (ENSGMOG00000009736)	pfdn2 (ENSGMOG00000024138)
Protacanthopterygii	ANCESTRAL SPECIES	20	ENSGT00940000155804.k.a	ENSGT00530000063790.b	ENSGT00940000155586.B	ENSGT00940000155527.j.a	ENSGT00940000154658.a	ENSGT00950000182886.a.b	ENSGT01090000260185.a	ENSGT00940000154273.b	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT01100000263613	ENSGT00940000163927.a.a.v #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000163927.a.a.u #25	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.b #30	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b	ENSGT00940000165987	ENSGT00390000018418	ENSGT00440000037582	ENSGT00940000158001
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	23	MPDZ (ENSELUG00000017678)	ADGRL3 (ENSELUG00000017939)	ENSELUG00000026228	ENSELUG00000018451	ENSELUG00000018661	ENSELUG00000026966	ENSELUG00000018725 #14	BCL6B (ENSELUG00000018787) #15	SLC16A13 (ENSELUG00000018819) #16	acap1 (ENSELUG00000018894) #17	agfg2 (ENSELUG00000018937) #18	ENSELUG00000018954 #19	si:ch73-335l21.4 (ENSELUG00000018979) #20	dvl2 (ENSELUG00000019029) #22	ENSELUG00000019044	ENSELUG00000027323 #22	ENSELUG00000019034	ENSELUG00000019093	ponzr1 (ENSELUG00000019120) #25	ponzr1 (ENSELUG00000019130) #25	ENSELUG00000019155 #26	ENSELUG00000019206 #27	cnpy4 (ENSELUG00000019246) #28	ENSELUG00000019259 #29	ENSELUG00000019296 #30	ENSELUG00000031501 #30	zgc:103586 (ENSELUG00000019315)	fis1 (ENSELUG00000019347)	cldn15a (ENSELUG00000019355)	dnajc3b (ENSELUG00000019390)	naa38 (ENSELUG00000031744)
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	23	TYRP1 (ENSELUG00000017554)	LURAP1L (ENSELUG00000000688)	MPDZ (ENSELUG00000017678)	ADGRL3 (ENSELUG00000017939)	ENSELUG00000026228	ENSELUG00000018451	ENSELUG00000018661	ENSELUG00000026966	ENSELUG00000018725 #14	BCL6B (ENSELUG00000018787) #15	SLC16A13 (ENSELUG00000018819) #16	acap1 (ENSELUG00000018894) #17	agfg2 (ENSELUG00000018937) #18	ENSELUG00000018954 #19	si:ch73-335l21.4 (ENSELUG00000018979) #20	dvl2 (ENSELUG00000019029) #22	ENSELUG00000019044	ENSELUG00000027323 #22	ENSELUG00000019034	ENSELUG00000019093	ponzr1 (ENSELUG00000019120) #25	ponzr1 (ENSELUG00000019130) #25	ENSELUG00000019155 #26	ENSELUG00000019206 #27	cnpy4 (ENSELUG00000019246) #28	ENSELUG00000019259 #29	ENSELUG00000019296 #30	ENSELUG00000031501 #30	zgc:103586 (ENSELUG00000019315)	fis1 (ENSELUG00000019347)	cldn15a (ENSELUG00000019355)
Northern pike	MODERN SPECIES	6	SPNS2 (ENSELUG00000008192)	ENSELUG00000008138 ##10	ENSELUG00000000297 ##12	fis1 (ENSELUG00000008092)	ENSELUG00000025227	ENSELUG00000008020	ENSELUG00000007981	ENSELUG00000031227	ENSELUG00000008004	cldn15b (ENSELUG00000007924)	sat2 (ENSELUG00000007897)	ENSELUG00000007789 ##30	taf6 (ENSELUG00000007773)	ENSELUG00000007738	ENSELUG00000007711	DVL2 (ENSELUG00000001467) #22	acadvl (ENSELUG00000007636) #23	ENSELUG00000007581	klf5l (ENSELUG00000007518)	klf8 (ENSELUG00000007479)	cldn2 (ENSELUG00000007390)	rbm41 (ENSELUG00000007426)	PRRG3 (ENSELUG00000007351)	ENSELUG00000027456	ENSELUG00000007333	ENSELUG00000007289	ENSELUG00000007235	ENSELUG00000027175	ZPLD1 (ENSELUG00000007186)	alcama (ENSELUG00000007135)	CBLB (ENSELUG00000007002)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	256	ENSGT00940000153617.B.h	ENSGT00940000155804.k.a.a	ENSGT00530000063790.b.d	ENSGT00940000155586.B.g.b	ENSGT00940000155527.j.a.e.a	ENSGT00940000154658.a.d	ENSGT00940000156022.a.c.b #14	ENSGT01090000260185.a	ENSGT00940000156022.a.c.a #14	ENSGT00940000159844.h #15	ENSGT00940000160289.l #17	ENSGT00940000161071.i #18	ENSGT00940000166370.f #19	ENSGT00730000112287.h #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.g.a #22	ENSGT00940000158535 #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000164016.e	ENSGT00940000161062.c.b	ENSGT00940000160785	ENSGT00940000161538	ENSGT00940000160946
Salmoninae_a	ANCESTRAL SPECIES	20	ENSGT00530000063790.b.d	ENSGT00940000155586.B.g.b	ENSGT00940000155527.j.a.e.a	ENSGT00940000154658.a.d	ENSGT00940000156022.a.c.b #14	ENSGT01090000260185.a.a	ENSGT01090000260185.a.b	ENSGT00940000154273.b.h	ENSGT00940000156022.a.c.a #14	ENSGT00940000159844.h #15	ENSGT00940000160289.l #17	ENSGT00940000161071.i #18	ENSGT00940000166370.f #19	ENSGT00730000112287.h #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.g.a #22	ENSGT00730000112044.e.a.b	ENSGT01100000263613.c	ENSGT00940000163927.a.a.v.b #25	ENSGT00940000153491.b.b.b.c #26	ENSGT00940000166316.e #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a.a #29	ENSGT00940000165960.b #30	ENSGT00940000167107	ENSGT00390000000592.w.b	ENSGT00940000165100.b.c	ENSGT00940000165987.b	ENSGT00390000018418.j	ENSGT00440000037582.n.a	ENSGT00940000158001.h
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000155804.k.a.a	ENSGT00530000063790.b.d	ENSGT00940000155586.B.g.b	ENSGT00940000155527.j.a.e.a	ENSGT00940000154658.a.d	ENSGT00940000156022.a.c.b #14	ENSGT01090000260185.a.a	ENSGT00940000154273.b.h.a	ENSGT00940000156022.a.c.a #14	ENSGT00940000159844.h #15	ENSGT00940000160289.l #17	ENSGT00940000161071.i #18	ENSGT00940000166370.f #19	ENSGT00730000112287.h #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.g.a #22	ENSGT00730000112044.e.a.b	ENSGT01100000263613.c	ENSGT00940000163927.a.a.u #25	ENSGT00940000153491.b.b.b.c #26	ENSGT00940000166316.e #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a.a #29	ENSGT00940000165960.b #30	ENSGT00940000167107	ENSGT00390000000592.w.b	ENSGT00940000165100.b.c	ENSGT00940000165987.b	ENSGT00390000018418.j.a	ENSGT00940000158001.h.a	ENSGT00510000050706.d
Oncorhynchus_a	ANCESTRAL SPECIES	239								ENSGT00940000154273.b.h.a	ENSGT00940000156022.a.c.a #14	ENSGT00940000159844.h #15	ENSGT00940000160289.l #17	ENSGT00940000161071.i #18	ENSGT00940000166370.f #19	ENSGT00730000112287.h #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.g.a #22	ENSGT00980000199875.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	55							ADGRL3 (ENSOTSG00005042055)	ENSOTSG00005046578	TRIP6 (ENSOTSG00005046586)	ENSOTSG00005046589 #14	BCL6B (ENSOTSG00005046590) #15	acap1 (ENSOTSG00005046591) #17	agfg2 (ENSOTSG00005046596) #18	ENSOTSG00005046598 #19	si:ch73-335l21.4 (ENSOTSG00005046600) #20	dvl2 (ENSOTSG00005046604) #22	ENSOTSG00005046662	ENSOTSG00005046664	ponzr1 (ENSOTSG00005046665) #25	ENSOTSG00005046667 #27	cnpy4 (ENSOTSG00005046668) #28	ENSOTSG00005046669 #29	ENSOTSG00005046670 #30	zgc:103586 (ENSOTSG00005046671)	fis1 (ENSOTSG00005046672)	cldn15a (ENSOTSG00005046673)	dnajc3b (ENSOTSG00005046674)	naa38 (ENSOTSG00005046684)	ENSOTSG00005046685	CHD3 (ENSOTSG00005046688)	tnfsf12 (ENSOTSG00005047009)
Chinook salmon	MODERN SPECIES	40					ADGRL3 (ENSOTSG00005041695)	ENSOTSG00005041609	ENSOTSG00005041603	ENSOTSG00005041601 #14	ENSOTSG00005041600 #14	BCL6B (ENSOTSG00005041595) #15	acap1 (ENSOTSG00005037711) #17	agfg2 (ENSOTSG00005037693) #18	ENSOTSG00005037692 #19	si:ch73-335l21.4 (ENSOTSG00005037688) #20	si:ch73-335l21.2 (ENSOTSG00005037687) #21	dvl2 (ENSOTSG00005037686) #22	ENSOTSG00005037678	ENSOTSG00005037674	ponzr1 (ENSOTSG00005037672) #25	ENSOTSG00005037670 #27	cnpy4 (ENSOTSG00005037667) #28	ENSOTSG00005037666 #29	ENSOTSG00005037665 #30	zgc:103586 (ENSOTSG00005037662)	fis1 (ENSOTSG00005037660)	cldn15a (ENSOTSG00005037658)	dnajc3b (ENSOTSG00005037588)	naa38 (ENSOTSG00005037586)	ENSOTSG00005037585	CHD3 (ENSOTSG00005036981)	tnfsf12 (ENSOTSG00005036976)
Coho salmon	MODERN SPECIES	29	ENSOKIG00005047144	PTPRD (ENSOKIG00005029261)	TYRP1 (ENSOKIG00005028467)	LURAP1L (ENSOKIG00005028452)	MPDZ (ENSOKIG00005022843)	ADGRL3 (ENSOKIG00005016342)	ENSOKIG00005016099	ENSOKIG00005015595	ENSOKIG00005015528	ENSOKIG00005015469 #14	BCL6B (ENSOKIG00005015446) #15	acap1 (ENSOKIG00005015336) #17	agfg2 (ENSOKIG00005015299) #18	ENSOKIG00005015281 #19	si:ch73-335l21.4 (ENSOKIG00005015257) #20	dvl2 (ENSOKIG00005015058) #22	ENSOKIG00005015036	ENSOKIG00005015029	ENSOKIG00005015027	ponzr1 (ENSOKIG00005015022) #25	ENSOKIG00005015014 #26	ENSOKIG00005015002 #27	cnpy4 (ENSOKIG00005014994) #28	ENSOKIG00005014989 #29	ENSOKIG00005014984 #30	zgc:103586 (ENSOKIG00005014965)	fis1 (ENSOKIG00005014935)	cldn15a (ENSOKIG00005014925)	dnajc3b (ENSOKIG00005014812)	naa38 (ENSOKIG00005014793)	ENSOKIG00005014781
Rainbow trout	MODERN SPECIES	13	MPDZ (ENSOMYG00000043957)	ENSOMYG00000034945	ENSOMYG00000033362	ENSOMYG00000033004	ENSOMYG00000032995	ENSOMYG00000055106	ENSOMYG00000032987	ENSOMYG00000032944	ENSOMYG00000032847 #15	acap1 (ENSOMYG00000030898) #17	ENSOMYG00000071940	agfg2 (ENSOMYG00000030472) #18	ENSOMYG00000030390 #19	si:ch73-335l21.4 (ENSOMYG00000030444) #20	ENSOMYG00000018086	dvl2 (ENSOMYG00000030433) #22	ENSOMYG00000030413	ENSOMYG00000030370	ponzr1 (ENSOMYG00000049606) #25	ENSOMYG00000050850	ENSOMYG00000065068 #26	ENSOMYG00000030360 #27	cnpy4 (ENSOMYG00000030339) #28	ENSOMYG00000030332	ENSOMYG00000030322 #29	ENSOMYG00000050442 #30	zgc:103586 (ENSOMYG00000030282)	fis1 (ENSOMYG00000030252)	ENSOMYG00000030212	dnajc3b (ENSOMYG00000030162)	ENSOMYG00000030086
Salmo	ANCESTRAL SPECIES	49	ENSGT00940000155804.k.a.a	ENSGT00530000063790.b.d	ENSGT00940000155586.B.g.b	ENSGT00940000155527.j.a.e.a	ENSGT00940000154658.a.d	ENSGT00940000156022.a.c.b #14	ENSGT01090000260185.a.a	ENSGT00940000154273.b.h	ENSGT01090000260185.a.b	ENSGT00940000156022.a.c.a #14	ENSGT00940000159844.h #15	ENSGT00940000160289.l #17	ENSGT00940000155511.m	ENSGT00940000166370.f #19	ENSGT00730000112287.h #20	ENSGT00950000182903.a.b.i.g.a #22	ENSGT00940000158535.w #23	ENSGT00730000112044.e.a.b	ENSGT01100000263613.c	ENSGT00940000163927.a.a.v.b #25	ENSGT00940000153491.b.b.b.c #26	ENSGT00940000166316.e #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a.a #29	ENSGT00940000165960.b #30	ENSGT00940000167107	ENSGT00390000000592.w.b	ENSGT00940000165100.b.c	ENSGT00940000165987.b	ENSGT00390000018418.j	ENSGT00440000037582.n.a
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000076592	ci150 (ENSSSAG00000076598)	ENSSSAG00000076710	ENSSSAG00000078516	ENSSSAG00000079215	ENSSSAG00000101481 #14	ENSSSAG00000079518	ENSSSAG00000109805	ENSSSAG00000079541	ENSSSAG00000114456 #14	ENSSSAG00000079545 #15	acap1 (ENSSSAG00000087747) #17	ENSSSAG00000079568	ENSSSAG00000092192 #19	si:ch73-335l21.4 (ENSSSAG00000079580) #20	dvl2 (ENSSSAG00000079590) #22	ENSSSAG00000079609 #23	ENSSSAG00000079611	ENSSSAG00000079612	ponzr1 (ENSSSAG00000104990) #25	ENSSSAG00000079617 #26	ENSSSAG00000108254	ENSSSAG00000079625 #27	cnpy4 (ENSSSAG00000079629) #28	ENSSSAG00000079632 #29	zgc:103586 (ENSSSAG00000079641)	ENSSSAG00000079648	ENSSSAG00000097741	dnajc3b (ENSSSAG00000079658)	NAA38 (ENSSSAG00000079665)	cyb5d1 (ENSSSAG00000079666)
River trout	MODERN SPECIES	38	USP53 (ENSSTUG00000043882)	PTPRD (ENSSTUG00000044156)	TYRP1 (ENSSTUG00000050648)	LURAP1L (ENSSTUG00000050649)	MPDZ (ENSSTUG00000050655)	ADGRL3 (ENSSTUG00000050737)	ENSSTUG00000051008	ENSSTUG00000051014 #14	ENSSTUG00000030551	ENSSTUG00000030569	BCL6B (ENSSTUG00000030577) #15	acap1 (ENSSTUG00000030593) #17	ENSSTUG00000030841	ENSSTUG00000030850 #19	si:ch73-335l21.4 (ENSSTUG00000030854) #20	dvl2 (ENSSTUG00000030865) #22	ENSSTUG00000031101	ENSSTUG00000031105	ponzr1 (ENSSTUG00000031108) #25	ENSSTUG00000031117 #26	ENSSTUG00000031130 #27	cnpy4 (ENSSTUG00000031133) #28	ENSSTUG00000031140 #30	zgc:103586 (ENSSTUG00000031150)	fis1 (ENSSTUG00000031167)	cldn15a (ENSSTUG00000031271)	dnajc3b (ENSSTUG00000031283)	naa38 (ENSSTUG00000031346)	cyb5d1 (ENSSTUG00000031358)	CHD3 (ENSSTUG00000031509)	tnfsf12 (ENSSTUG00000034203)
Huchen	MODERN SPECIES	503												ENSHHUG00000008833	ENSHHUG00000008822 #19	si:ch73-335l21.4 (ENSHHUG00000008813) #20	si:ch73-335l21.2 (ENSHHUG00000008791) #21	dvl2 (ENSHHUG00000008707) #22	ENSHHUG00000008689	ENSHHUG00000008685	ponzr1 (ENSHHUG00000008684) #25	ENSHHUG00000008677 #26	ENSHHUG00000008643 #26	ENSHHUG00000008629 #26	ENSHHUG00000008626 #27	cnpy4 (ENSHHUG00000008620) #28	ENSHHUG00000008610 #29	ENSHHUG00000008605 #30	zgc:103586 (ENSHHUG00000008585)	fis1 (ENSHHUG00000008549)	cldn15a (ENSHHUG00000008529)	dnajc3b (ENSHHUG00000008435)	naa38 (ENSHHUG00000008426)
Salmoninae	ANCESTRAL SPECIES	594					ENSGT01090000260185.b	ENSGT00940000156022.a.d #14	ENSGT00940000155527.j.a.e.b	ENSGT00940000154658.a.c	ENSGT00940000154273.b.g	ENSGT00940000159844.g #15	ENSGT00940000159372 #16	ENSGT00940000160289.k #17	ENSGT00940000161071.j #18	ENSGT00940000166370.e #19	ENSGT00730000112287.g #20	ENSGT00950000182903.a.b.i.g.b #22	ENSGT01100000263613.d	ENSGT00940000163927.a.a.v.a #25	ENSGT00940000153491.b.b.b.d #26	ENSGT00940000166316.f #27
Salmoninae_a	ANCESTRAL SPECIES	34	ENSGT00940000156337.c.h	ENSGT00940000153617.B.g	ENSGT00940000155804.k.a.b	ENSGT00530000063790.b.c	ENSGT00940000155586.B.g.a	ENSGT00940000155527.j.a.e.b	ENSGT00940000154658.a.c	ENSGT01090000260185.b	ENSGT00940000156022.a.d #14	ENSGT00940000159844.g #15	ENSGT00940000159372 #16	ENSGT00940000160289.k #17	ENSGT00940000161071.j #18	ENSGT00940000166370.e #19	ENSGT00730000112287.g #20	ENSGT00950000182903.a.b.i.g.b #22	ENSGT00990000208909	ENSGT01100000263613.d	ENSGT00940000163927.a.a.v.a #25	ENSGT00940000153491.b.b.b.d #26	ENSGT00940000166316.f #27	ENSGT01000000221243	ENSGT00940000156128.a.b #29	ENSGT00940000165054.A.d	ENSGT00390000000592.w.a	ENSGT00940000165100.b.d	ENSGT00940000165987.a.a	ENSGT00390000018418.i	ENSGT00440000037582.m	ENSGT00940000158001.g	ENSGT00510000050706.c
Salmo	ANCESTRAL SPECIES	18	ENSGT00940000153617.B.g	ENSGT00940000155804.k.a.b	ENSGT00530000063790.b.c	ENSGT00940000155586.B.g.a	ENSGT00940000155527.j.a.e.b	ENSGT00940000154658.a.c	ENSGT01090000260185.b	ENSGT00940000156022.a.d #14	ENSGT00940000159844.g #15	ENSGT00940000159372 #16	ENSGT00940000160289.k #17	ENSGT00940000161071.j #18	ENSGT00940000166370.e #19	ENSGT00730000112287.g #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.g.b #22	ENSGT00990000208909	ENSGT01100000263613.d	ENSGT00940000163927.a.a.u #25	ENSGT00940000163927.a.a.v.a #25	ENSGT00940000153491.b.b.b.d #26	ENSGT00940000166316.f #27	ENSGT01000000221243	ENSGT00940000156128.a.b #29	ENSGT00940000165054.A.d	ENSGT00390000000592.w.a	ENSGT00940000165100.b.d	ENSGT00940000165987.a.a	ENSGT00390000018418.i	ENSGT00440000037582.n.b	ENSGT00940000158001.g
Atlantic salmon	MODERN SPECIES	9	USP53 (ENSSSAG00000074275)	PTPRD (ENSSSAG00000096916)	tyrp-1 (ENSSSAG00000075543)	LURAP1L (ENSSSAG00000122135)	ENSSSAG00000075588	ENSSSAG00000076648	ENSSSAG00000079701	ENSSSAG00000117990	ENSSSAG00000079961 #14	ENSSSAG00000079969 #15	ENSSSAG00000079975 #16	acap1 (ENSSSAG00000080011) #17	agfg2 (ENSSSAG00000080121) #18	ENSSSAG00000080127 #19	si:ch73-335l21.2 (ENSSSAG00000080136) #21	dvl2 (ENSSSAG00000080142) #22	ENSSSAG00000080197	ENSSSAG00000090733	ENSSSAG00000113794	ponzr1 (ENSSSAG00000080201) #25	ENSSSAG00000098248	ENSSSAG00000080204 #26	ENSSSAG00000080205 #27	ENSSSAG00000080207	ENSSSAG00000080209 #29	fis1 (ENSSSAG00000080211)	cldn15a (ENSSSAG00000088850)	dnajc3b (ENSSSAG00000080221)	ENSSSAG00000040285	naa38 (ENSSSAG00000040010)	ENSSSAG00000046781
River trout	MODERN SPECIES	35	PTPRD (ENSSTUG00000005964)	TYRP1 (ENSSTUG00000028684)	LURAP1L (ENSSTUG00000028702)	MPDZ (ENSSTUG00000028873)	ADGRL3 (ENSSTUG00000033369)	ENSSTUG00000040419	ENSSTUG00000040514	ENSSTUG00000040538 #14	BCL6B (ENSSTUG00000040579) #15	SLC16A13 (ENSSTUG00000040627) #16	ENSSTUG00000040660	acap1 (ENSSTUG00000040685) #17	agfg2 (ENSSTUG00000040829) #18	ENSSTUG00000040864 #19	si:ch73-335l21.4 (ENSSTUG00000040890) #20	dvl2 (ENSSTUG00000040929) #22	ENSSTUG00000041643	ENSSTUG00000041708	ponzr1 (ENSSTUG00000041721) #25	ENSSTUG00000041735 #26	ENSSTUG00000041837 #29	ENSSTUG00000041879	fis1 (ENSSTUG00000041897)	cldn15a (ENSSTUG00000041935)	dnajc3b (ENSSTUG00000041966)	cyb5d1 (ENSSTUG00000042645)	naa38 (ENSSTUG00000042692)	CHD3 (ENSSTUG00000042921)	tnfsf12 (ENSSTUG00000043460)	ENSSTUG00000043472 #12	ENSSTUG00000043519 #10
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT00940000153617.B.g	ENSGT00960000188752.b.a.a.b	ENSGT00940000155804.k.a.b	ENSGT00530000063790.b.c	ENSGT00940000155586.B.g.a	ENSGT00940000155527.j.a.e.b	ENSGT00940000154658.a.c	ENSGT01090000260185.b	ENSGT00940000156022.a.d #14	ENSGT00940000159844.g #15	ENSGT00940000159372 #16	ENSGT00940000160289.k #17	ENSGT00940000161071.j #18	ENSGT00940000166370.e #19	ENSGT00730000112287.g #20	ENSGT00950000182903.a.b.i.g.b #22	ENSGT00990000208909	ENSGT01100000263613.d	ENSGT00940000163927.a.a.v.a #25	ENSGT00940000153491.b.b.b.d #26	ENSGT00940000166316.f #27	ENSGT01000000221243	ENSGT00940000156128.a.b #29	ENSGT00940000165054.A.d	ENSGT00390000000592.w.a	ENSGT00940000165100.b.d	ENSGT00940000165987.a.a	ENSGT00390000018418.i	ENSGT00440000037582.m	ENSGT00940000158001.g	ENSGT00510000050706.c
Rainbow trout	MODERN SPECIES	30	TYRP1 (ENSOMYG00000025839)	LURAP1L (ENSOMYG00000025827)	MPDZ (ENSOMYG00000022089)	ENSOMYG00000075032	ENSOMYG00000013446	ENSOMYG00000012761	ENSOMYG00000012701	ENSOMYG00000074378	ENSOMYG00000052636	ENSOMYG00000012672 #15	ENSOMYG00000012661 #16	acap1 (ENSOMYG00000010288) #17	agfg2 (ENSOMYG00000009492) #18	ENSOMYG00000009460 #19	si:ch73-335l21.4 (ENSOMYG00000009419) #20	dvl2 (ENSOMYG00000009408) #22	ENSOMYG00000009372	ENSOMYG00000009340	ponzr1 (ENSOMYG00000009316) #25	ENSOMYG00000056354 #26	ENSOMYG00000009263 #27	ENSOMYG00000009246	ENSOMYG00000009224 #29	ENSOMYG00000052402	fis1 (ENSOMYG00000009200)	cldn15a (ENSOMYG00000009184)	dnajc3b (ENSOMYG00000008992)	NAA38 (ENSOMYG00000008869)	cyb5d1 (ENSOMYG00000008841)	CHD3 (ENSOMYG00000005962)	tnfsf12 (ENSOMYG00000003529)
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT00940000153617.B.g	ENSGT00960000188752.b.a.a.b	ENSGT00940000155804.k.a.b	ENSGT00530000063790.b.c	ENSGT00940000155586.B.g.a	ENSGT00940000155527.j.a.e.b	ENSGT00940000154658.a.c	ENSGT01090000260185.b	ENSGT00940000156022.a.d #14	ENSGT00940000159844.g #15	ENSGT00940000159372 #16	ENSGT00940000160289.k #17	ENSGT00940000161071.j #18	ENSGT00940000166370.e #19	ENSGT00730000112287.g #20	ENSGT00950000182903.a.b.i.g.b #22	ENSGT00990000208909	ENSGT01100000263613.d	ENSGT00940000163927.a.a.v.a #25	ENSGT00940000153491.b.b.b.d #26	ENSGT00940000166316.f #27	ENSGT00940000156128.a.b #29	ENSGT00940000165054.A.d	ENSGT00390000000592.w.a	ENSGT00940000165100.b.d	ENSGT00940000165987.a.a	ENSGT00390000018418.i	ENSGT00440000037582.m	ENSGT00940000158001.g	ENSGT00510000050706.c	ENSGT00800000125278
Coho salmon	MODERN SPECIES	7	TYRP1 (ENSOKIG00005016952)	LURAP1L (ENSOKIG00005016940)	MPDZ (ENSOKIG00005010909)	ADGRL3 (ENSOKIG00005006122)	ENSOKIG00005005786	ENSOKIG00005005518	ENSOKIG00005005458	ENSOKIG00005005451 #14	ENSOKIG00005005445 #15	ENSOKIG00005005442	SLC16A13 (ENSOKIG00005005433) #16	acap1 (ENSOKIG00005005394) #17	agfg2 (ENSOKIG00005005355) #18	ENSOKIG00005005344 #19	si:ch73-335l21.4 (ENSOKIG00005005335) #20	dvl2 (ENSOKIG00005005303) #22	ENSOKIG00005005280	ENSOKIG00005005274	ponzr1 (ENSOKIG00005005264) #25	ENSOKIG00005005250 #26	ENSOKIG00005005243 #27	ENSOKIG00005005236 #29	ENSOKIG00005005230	fis1 (ENSOKIG00005005223)	cldn15a (ENSOKIG00005005215)	dnajc3b (ENSOKIG00005004918)	NAA38 (ENSOKIG00005004866)	cyb5d1 (ENSOKIG00005004853)	CHD3 (ENSOKIG00005004700)	tnfsf12 (ENSOKIG00005004677)	ENSOKIG00005004669
Chinook salmon	MODERN SPECIES	1	PTPRD (ENSOTSG00005024026)	ENSOTSG00005023889	TYRP1 (ENSOTSG00005023884)	MPDZ (ENSOTSG00005015616)	cdk6 (ENSOTSG00005015574)	ADGRL3 (ENSOTSG00005008372)	ENSOTSG00005008304	ENSOTSG00005008295	ENSOTSG00005008294 #14	ENSOTSG00005008291 #15	SLC16A13 (ENSOTSG00005008287) #16	acap1 (ENSOTSG00005002953) #17	agfg2 (ENSOTSG00005002772) #18	si:ch73-335l21.4 (ENSOTSG00005002763) #20	ENSOTSG00005002753 #19	dvl2 (ENSOTSG00005002746) #22	ENSOTSG00005002743	ponzr1 (ENSOTSG00005002742) #25	ENSOTSG00005002729 #26	ENSOTSG00005002719 #27	ENSOTSG00005002704 #29	ENSOTSG00005002696	fis1 (ENSOTSG00005002690)	cldn15a (ENSOTSG00005002685)	dnajc3b (ENSOTSG00005002398)	naa38 (ENSOTSG00005002389)	cyb5d1 (ENSOTSG00005002377)	tnfsf12 (ENSOTSG00005002342)	ENSOTSG00005002337 #12	ENSOTSG00005002326 #10	NEURL4 (ENSOTSG00005001903) #8
Huchen	MODERN SPECIES	412						ENSHHUG00000014088	ENSHHUG00000015197	ENSHHUG00000016131	ENSHHUG00000016161 #14	BCL6B (ENSHHUG00000016168) #15	SLC16A13 (ENSHHUG00000016192) #16	acap1 (ENSHHUG00000016201) #17	agfg2 (ENSHHUG00000016247) #18	ENSHHUG00000016288 #19	si:ch73-335l21.4 (ENSHHUG00000016299) #20	dvl2 (ENSHHUG00000016309) #22	ENSHHUG00000016421	ponzr1 (ENSHHUG00000016423) #25	ENSHHUG00000016432 #26
Salmoninae	ANCESTRAL SPECIES	1303														ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.`b.b	ENSGT00950000182903.a.b.i.h #22
Salmoninae_a	ANCESTRAL SPECIES	129														ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.`b.b	ENSGT00950000182903.a.b.i.h #22	ENSGT00940000158535 #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000164016.e	ENSGT00940000161062.c.b	ENSGT00940000160785	ENSGT00940000161538	ENSGT00940000160946	ENSGT00940000163093.a.b	ENSGT00510000047299.c	ENSGT00940000155158.q.b	ENSGT00390000000214.a.a.f	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00950000183018.a.d.b	ENSGT00530000064130
Salmo	ANCESTRAL SPECIES	153														ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.`b.b	ENSGT00950000182903.a.b.i.h #22	ENSGT00940000158535.x #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000164016.e	ENSGT00940000161062.c.b	ENSGT00940000160785	ENSGT00940000161538	ENSGT00940000160946	ENSGT00940000163093.a.b	ENSGT00510000047299.c	ENSGT00940000155158.r	ENSGT00390000000214.a.a.f	ENSGT00940000156881.h	ENSGT00940000156631.B.g	ENSGT00950000183018.a.d.b	ENSGT00530000064130
River trout	MODERN SPECIES	10					ENSSTUG00000010128	mrps17 (ENSSTUG00000010076)	ENSSTUG00000010044	ENSSTUG00000010041	septin4a (ENSSTUG00000009953)	mntb (ENSSTUG00000009947)	ENSSTUG00000009943	pafah1b1b (ENSSTUG00000009861)	ZPLD1 (ENSSTUG00000009819)	ENSSTUG00000009810 ##30	taf6 (ENSSTUG00000009794)	DVL2 (ENSSTUG00000009670) #22	acadvl (ENSSTUG00000008764) #23	ENSSTUG00000008704	klf5l (ENSSTUG00000008696)	klf8 (ENSSTUG00000008680)	cldn2 (ENSSTUG00000008677)	ripply1 (ENSSTUG00000008669)	PRRG3 (ENSSTUG00000008657)	ENSSTUG00000008644	pgap2 (ENSSTUG00000008636)	ENSSTUG00000008628	stim1b (ENSSTUG00000007559)	alcama (ENSSTUG00000007257)	ENSSTUG00000007085	ENSSTUG00000007054	ENSSTUG00000007049
Atlantic salmon	MODERN SPECIES	23	LGI2 (ENSSSAG00000043307)	ENSSSAG00000111674	ENSSSAG00000043456	ENSSSAG00000045334	ENSSSAG00000113463	ENSSSAG00000063298	ENSSSAG00000045683	ENSSSAG00000045653	ENSSSAG00000010182	ENSSSAG00000096375	ENSSSAG00000005502	ENSSSAG00000045602	ENSSSAG00000084245 ##30	ENSSSAG00000045755	ENSSSAG00000049715	ENSSSAG00000047918 #22	ENSSSAG00000049619 #23	klf5l (ENSSSAG00000049796)	klf8 (ENSSSAG00000088225)	ENSSSAG00000107634	cldn2 (ENSSSAG00000086905)	ripply1 (ENSSSAG00000049824)	ENSSSAG00000102949	ENSSSAG00000049840	pgap2 (ENSSSAG00000049858)	ENSSSAG00000049978	ENSSSAG00000054868	ENSSSAG00000054962	ENSSSAG00000089981	ENSSSAG00000085065	ENSSSAG00000111565
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00940000160071.h	ENSGT00940000153394.c.b.b.c.a.a.a	ENSGT00940000162605	ENSGT00940000165017.b	ENSGT00940000154932.A.v	ENSGT00940000157478.b.c.a	ENSGT00940000157170.j	ENSGT00940000165144.a.b	ENSGT00390000010377.i	ENSGT00940000158861.B.d	ENSGT00390000007925	ENSGT00940000159852.a.d	ENSGT00950000182931.B.a.a.h	ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.`b.b	ENSGT00950000182903.a.b.i.h #22	ENSGT00940000158535.z #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000164016.e	ENSGT00940000161062.c.b	ENSGT00940000160785	ENSGT00940000161538	ENSGT00940000160946	ENSGT00940000163093.a.b	ENSGT00510000047299.c	ENSGT00940000155158.q.b	ENSGT00390000000214.a.a.f	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00990000204242	ENSGT01030000235320
Oncorhynchus_a	ANCESTRAL SPECIES	31	ENSGT00940000160071.h	ENSGT00940000153394.c.b.b.c.a.a.a	ENSGT00940000162605	ENSGT00940000165017.b	ENSGT00940000154932.A.v	ENSGT00940000157478.b.c.a	ENSGT00940000157170.j	ENSGT00940000165144.a.b	ENSGT00390000010377.i	ENSGT00940000158861.B.d	ENSGT00390000007925	ENSGT00940000159852.a.d	ENSGT00950000182931.B.a.a.h	ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.`b.b	ENSGT00950000182903.a.b.i.h #22	ENSGT00940000158535.z #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000164016.e	ENSGT00940000161062.c.b	ENSGT00940000160785	ENSGT00940000161538	ENSGT00940000160946	ENSGT00940000163093.a.b	ENSGT00510000047299.c	ENSGT00940000155158.q.b	ENSGT00390000000214.a.a.f	ENSGT00940000156881.h	ENSGT00940000156631.B	ENSGT00990000204242	ENSGT01030000235320
Coho salmon	MODERN SPECIES	10	USP15 (ENSOKIG00005020661)	ENSOKIG00005022108	KDM5A (ENSOKIG00005023104)	ENSOKIG00005032206	atxn10 (ENSOKIG00005032218)	ENSOKIG00005032291	ENSOKIG00005032345	cdpf1 (ENSOKIG00005032837)	cdkn1ba (ENSOKIG00005032876)	ENSOKIG00005032887	ENSOKIG00005032906	ENSOKIG00005033012	ENSOKIG00005033029 ##30	ENSOKIG00005033041	TAF6 (ENSOKIG00005033072)	DVL2 (ENSOKIG00005033322) #22	acadvl (ENSOKIG00005034237) #23	ENSOKIG00005035616	ENSOKIG00005035657	klf5l (ENSOKIG00005035664)	klf8 (ENSOKIG00005035674)	cldn2 (ENSOKIG00005035682)	ripply1 (ENSOKIG00005035690)	PRRG3 (ENSOKIG00005035710)	ENSOKIG00005035720	pgap2 (ENSOKIG00005035752)	RHOG (ENSOKIG00005035771)	stim1b (ENSOKIG00005035839)	alcama (ENSOKIG00005036381)	CBLB (ENSOKIG00005036643)	ENSOKIG00005036954
Chinook salmon	MODERN SPECIES	8	ENSOTSG00005042274	ENSOTSG00005042271	USP15 (ENSOTSG00005037629)	ENSOTSG00005028815	KDM5A (ENSOTSG00005006577)	ENSOTSG00005006493	atxn10 (ENSOTSG00005006492)	ENSOTSG00005006490	cdpf1 (ENSOTSG00005006488)	cdkn1ba (ENSOTSG00005006487)	ENSOTSG00005006486	ENSOTSG00005006480	ENSOTSG00005006479	ENSOTSG00005006478 ##30	taf6 (ENSOTSG00005006469)	DVL2 (ENSOTSG00005006252) #22	acadvl (ENSOTSG00005006224) #23	ENSOTSG00005006221	klf5l (ENSOTSG00005006220)	klf8 (ENSOTSG00005006218)	cldn2 (ENSOTSG00005006217)	ripply1 (ENSOTSG00005006216)	PRRG3 (ENSOTSG00005006215)	ENSOTSG00005006213	ENSOTSG00005006211	pgap2 (ENSOTSG00005006210)	rhogb (ENSOTSG00005006208)	stim1b (ENSOTSG00005002701)	alcama (ENSOTSG00005002523)	CBLB (ENSOTSG00005002425)	ENSOTSG00005002171
Rainbow trout	MODERN SPECIES	6	ENSOMYG00000027072	ENSOMYG00000027062	ENSOMYG00000024412	ENSOMYG00000022721	ENSOMYG00000017351	ENSOMYG00000039259	ENSOMYG00000017178	atxn10 (ENSOMYG00000017104)	ENSOMYG00000017059	cdpf1 (ENSOMYG00000017030)	cdkn1ba (ENSOMYG00000017016)	ENSOMYG00000016973	ENSOMYG00000016941	ENSOMYG00000016929 ##30	ENSOMYG00000016803	ENSOMYG00000015917 #22	ENSOMYG00000013682 #23	ENSOMYG00000063575	ENSOMYG00000013455	ENSOMYG00000076000	klf5l (ENSOMYG00000013448)	klf8 (ENSOMYG00000013437)	cldn2 (ENSOMYG00000013409)	ripply1 (ENSOMYG00000013400)	ENSOMYG00000013391	ENSOMYG00000013381	pgap2 (ENSOMYG00000013371)	ENSOMYG00000013354	stim1b (ENSOMYG00000011142)	ENSOMYG00000010749	ENSOMYG00000071898
Huchen	MODERN SPECIES	1278											ENSHHUG00000041000	MYT1L (ENSHHUG00000040944)	ENSHHUG00000040938 ##30	ENSHHUG00000040934	ENSHHUG00000040928	DVL2 (ENSHHUG00000040924) #22
Otomorpha	ANCESTRAL SPECIES	207		ENSGT00940000169954	ENSGT00600000085600	ENSGT00390000013368	ENSGT00510000047760	ENSGT01070000254383	ENSGT00940000167160	ENSGT00940000180688	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b.f	ENSGT00940000165987	ENSGT00440000037582	ENSGT00940000158001
Otophysi	ANCESTRAL SPECIES	210							ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT01010000222656	ENSGT00940000167107	ENSGT00940000156646.c	ENSGT00940000160303.a.a	ENSGT00940000166283 #11	ENSGT00650000094881
Characiphysae	ANCESTRAL SPECIES	45	ENSGT00940000157623	ENSGT00940000160414.c	ENSGT00940000163776.a.a	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000157843	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00950000182963.b.b	ENSGT00940000153904.b	ENSGT00940000153284.a.mc.a	ENSGT00940000164592	ENSGT00940000165991
Channel catfish	MODERN SPECIES	26	plcb3 (ENSIPUG00000001586)	slc8a4b (ENSIPUG00000001549)	cct7 (ENSIPUG00000001511)	HSPA12B (ENSIPUG00000001447)	paip2b (ENSIPUG00000001427)	nagk (ENSIPUG00000001389)	dok1 (ENSIPUG00000001379)	m1ap (ENSIPUG00000001358)	SEMA4F (ENSIPUG00000001339)	Slc16a13 (ENSIPUG00000001298) #16	Acap2 (ENSIPUG00000001193) #17	ENSIPUG00000001163	Irs1 (ENSIPUG00000001146) #19	si:ch73-335l21.4 (ENSIPUG00000001141) #20	si:ch73-335l21.2 (ENSIPUG00000001136) #21	dvl2 (ENSIPUG00000001111) #22	ACADVL (ENSIPUG00000001041) #23	ENSIPUG00000001107	ponzr1 (ENSIPUG00000001032) #25	ponzr1 (ENSIPUG00000001027) #25	ENSIPUG00000001006 #26	ENSIPUG00000000992 #27	cnpy4 (ENSIPUG00000000974) #28	hdac8 (ENSIPUG00000000898)	cited1 (ENSIPUG00000000879)	rps4x (ENSIPUG00000000840)	NHSL2 (ENSIPUG00000000835)	arhgap36 (ENSIPUG00000000815)	ENSIPUG00000000775	zgc (ENSIPUG00000000761)	gc2 (ENSIPUG00000000742)
Characiphysae_b	ANCESTRAL SPECIES	154				ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000157843	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00950000182963.b.b	ENSGT00940000153904.b	ENSGT00940000153284.a.mc.a	ENSGT00940000164592	ENSGT00940000165991
Characoidei	ANCESTRAL SPECIES	9				ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000155511.m	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000157843	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00950000182963.b.b	ENSGT00940000153904.b	ENSGT00940000153284.a.mc.a	ENSGT00940000164592	ENSGT00940000165991
Mexicana tetra	MODERN SPECIES	7	faah2b (ENSAMXG00000004970)	TESK1 (ENSAMXG00000004969)	pik3c3 (ENSAMXG00000004965)	tm4sf5 (ENSAMXG00000034674)	si:dkey-85k7.7 (ENSAMXG00000041473)	mettl3 (ENSAMXG00000012824)	ENSAMXG00000043297	ENSAMXG00000036209 #14	ENSAMXG00000012978 #15	SLC16A13 (ENSAMXG00000013028) #16	acap1 (ENSAMXG00000013034) #17	ENSAMXG00000042645	ENSAMXG00000013079 #19	si:ch73-335l21.2 (ENSAMXG00000035766) #21	si:ch73-335l21.4 (ENSAMXG00000032709) #20	dvl2 (ENSAMXG00000013102) #22	acadvl (ENSAMXG00000013130) #23	ENSAMXG00000041941	ponzr1 (ENSAMXG00000040115) #25	ENSAMXG00000013152 #26	ENSAMXG00000013165 #27	ENSAMXG00000042790	cnpy4 (ENSAMXG00000013200) #28	hdac8 (ENSAMXG00000013212)	cited1 (ENSAMXG00000026480)	rps4x (ENSAMXG00000013268)	NHSL2 (ENSAMXG00000013279)	arhgap36 (ENSAMXG00000013311)	ENSAMXG00000040967	ENSAMXG00000031893	rasl11a (ENSAMXG00000035770)
Red-bellied piranha	MODERN SPECIES	501				tm4sf5 (ENSPNAG00000025644)	si:dkey-85k7.7 (ENSPNAG00000025656)	mettl3 (ENSPNAG00000025734)	ENSPNAG00000025861	ENSPNAG00000025875 #14	ENSPNAG00000025921 #15	SLC16A13 (ENSPNAG00000025938) #16	acap1 (ENSPNAG00000026121) #17	ENSPNAG00000006524	ENSPNAG00000006858 #19	si:ch73-335l21.4 (ENSPNAG00000026160) #20	si:ch73-335l21.2 (ENSPNAG00000004016) #21	dvl2 (ENSPNAG00000005502) #22	acadvl (ENSPNAG00000026273) #23	ENSPNAG00000026294	ponzr1 (ENSPNAG00000026305) #25	ponzr1 (ENSPNAG00000026318) #25	ENSPNAG00000026342 #26	ENSPNAG00000006479 #27
Electric eel	MODERN SPECIES	1219																dvl2 (ENSEEEG00000001538) #22	acadvl (ENSEEEG00000001057) #23	ENSEEEG00000001013	ponzr1 (ENSEEEG00000001011) #25
Cyprinoidei	ANCESTRAL SPECIES	14	ENSGT00390000005498	ENSGT00390000013762.a.f	ENSGT00510000048151.a	ENSGT00940000154790.a.b	ENSGT00940000160125	ENSGT01090000260185	ENSGT00940000154273.b	ENSGT00940000156022.a #14	ENSGT00940000159844 #15	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370 #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT01010000222656	ENSGT00940000167107.e	ENSGT00940000167107.f	ENSGT00940000156646.c.a	ENSGT00940000160303.a.a	ENSGT00940000166283 #11	ENSGT00650000094881
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	70	ENSGT00940000165127.b.a	ENSGT00940000165739.f.b	ENSGT00390000005498.a	ENSGT00390000013762.a.f.b	ENSGT00510000048151.a.d	ENSGT00940000154790.a.b.a	ENSGT00940000160125.l	ENSGT00940000154273.b.f	ENSGT00940000156022.a #14	ENSGT00940000159844.e #15	ENSGT00940000159372.e #16	ENSGT00940000160289.j #17	ENSGT00940000161071.e #18	ENSGT00940000166370.d #19	ENSGT00730000112287.a #20	ENSGT00950000182903.a.b.i.i #22	ENSGT00940000158535.ab #23	ENSGT01100000263613.f	ENSGT00940000163927.a.a.bb #25	ENSGT00940000153491.b.b.b.a #26	ENSGT00940000166316.a #27	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b.c ##30	ENSGT00940000167107.f	ENSGT00940000156646.c.a.a.a	ENSGT00940000160303.a.a	ENSGT00940000166283.hb #11	ENSGT00650000094881.a.b	ENSGT00950000183121.a.c.b.a	ENSGT00510000050706.a
Cyprininae_a	ANCESTRAL SPECIES	183	ENSGT00950000182924.A.a.d	ENSGT00940000165127.b.a	ENSGT00940000165739.f.b	ENSGT00390000005498.a	ENSGT00390000013762.a.f.b	ENSGT00510000048151.a.d	ENSGT00940000154790.a.b.a	ENSGT00940000160125.l	ENSGT00940000154273.b.f	ENSGT00940000159844.e #15	ENSGT00940000159372.e #16	ENSGT00940000160289.j #17	ENSGT00940000161071.e #18	ENSGT00940000166370.d #19	ENSGT00730000112287.a #20	ENSGT00950000182903.a.b.i.i #22	ENSGT00940000158535.ab #23	ENSGT01100000263613.f	ENSGT00940000163927.a.a.bb #25	ENSGT00940000153491.b.b.b.a #26	ENSGT00940000166316.a #27	ENSGT00390000014072.B.e #28	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b.c ##30	ENSGT00940000167107.f	ENSGT00940000156646.c.a.a.a	ENSGT00940000160303.a.a	ENSGT00940000166283.hb #11	ENSGT00650000094881.b	ENSGT00510000050706.a	ENSGT00940000158001.f
Golden-line barbel	MODERN SPECIES	226	ovol1a (ENSSGRG00000001893)	mus81 (ENSSGRG00000001892)	ENSSGRG00000001891	tmem179ba (ENSSGRG00000001889)	prox3 (ENSSGRG00000001887)	snx15 (ENSSGRG00000001886)	ENSSGRG00000001884	ENSSGRG00000001883	ENSSGRG00000001881	BCL6B (ENSSGRG00000001879) #15	SLC16A13 (ENSSGRG00000001878) #16	acap1 (ENSSGRG00000001728) #17	agfg2 (ENSSGRG00000001723) #18	ENSSGRG00000001721 #19	si:ch73-335l21.4 (ENSSGRG00000001719) #20	dvl2 (ENSSGRG00000001541) #22	ENSSGRG00000001532	ponzr1 (ENSSGRG00000001531) #25	ENSSGRG00000001529 #26	ENSSGRG00000001307 #27	cnpy4 (ENSSGRG00000001273) #28	ENSSGRG00000001263	ENSSGRG00000001258	zgc:103586 (ENSSGRG00000001250)	slc3a2a (ENSSGRG00000001232)	zpax4 (ENSSGRG00000001200) #11	ENSSGRG00000001175	ENSSGRG00000001161	tnfsf12 (ENSSGRG00000001141)	CHD3 (ENSSGRG00000054786)	cyb5d1 (ENSSGRG00000054766)
Common carp reference	MODERN SPECIES		ENSCCRG00000072781	ENSCCRG00000077923	ENSCCRG00000028749	ENSCCRG00000028745	mus81 (ENSCCRG00000028738)	ENSCCRG00000067345	prox3 (ENSCCRG00000075683)	snx15 (ENSCCRG00000082844)	ENSCCRG00000047066	ENSCCRG00000040056 #15	ENSCCRG00000073841 #16	acap1 (ENSCCRG00000055599) #17	agfg2 (ENSCCRG00000058070) #18	ENSCCRG00000066390	ENSCCRG00000023812 #19	dvl2 (ENSCCRG00000031042) #22	acadvl (ENSCCRG00000059681) #23	ENSCCRG00000060260	ponzr1 (ENSCCRG00000057472) #25	ENSCCRG00000024980 #26	ENSCCRG00000051467 #27	cnpy4 (ENSCCRG00000054790) #28	ENSCCRG00000000634 #29	ENSCCRG00000000614 ##30	zgc:103586 (ENSCCRG00000078336)	slc3a2a (ENSCCRG00000081287)	ENSCCRG00000067310	zpax4 (ENSCCRG00000000347) #11	ENSCCRG00000000323	tnfsf12 (ENSCCRG00000064814)	ENSCCRG00000034580
Goldfish	MODERN SPECIES	47	ENSCARG00000068323	ovol1a (ENSCARG00000068326)	ENSCARG00000068333	ENSCARG00000068397	tmem179ba (ENSCARG00000068422)	prox3 (ENSCARG00000068431)	snx15 (ENSCARG00000068447)	ENSCARG00000068468 #14	BCL6B (ENSCARG00000068480) #15	SLC16A13 (ENSCARG00000068491) #16	acap1 (ENSCARG00000068552) #17	agfg2 (ENSCARG00000068769) #18	ENSCARG00000068783 #19	si:ch73-335l21.4 (ENSCARG00000068794) #20	si:ch73-335l21.2 (ENSCARG00000068802) #21	dvl2 (ENSCARG00000068817) #22	acadvl (ENSCARG00000068888) #23	ENSCARG00000069113	ponzr1 (ENSCARG00000069121) #25	ENSCARG00000069129 #26	ENSCARG00000069146 #27	cnpy4 (ENSCARG00000069150) #28	ENSCARG00000069157 #29	ENSCARG00000069178 ##30	zgc:103586 (ENSCARG00000000191)	zgc:158423 (ENSCARG00000000262)	zpax4 (ENSCARG00000000404) #11	ENSCARG00000000537	ENSCARG00000000548	tnfsf12 (ENSCARG00000000556)	CHD3 (ENSCARG00000000593)
Cyprininae	ANCESTRAL SPECIES	1	ENSGT00940000165739.f.a	ENSGT00390000005498.b	ENSGT00390000013762.a.f.a	ENSGT00510000048151.a.c	ENSGT00940000154790.a.b.b	ENSGT00940000160125.k	ENSGT01090000260185	ENSGT00940000154273.b.e	ENSGT00940000159844.f #15	ENSGT00940000159372.f #16	ENSGT00940000160289.i #17	ENSGT00940000161071.f #18	ENSGT00940000166370.c #19	ENSGT00730000112287.b #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.j #22	ENSGT00940000158535.`b #23	ENSGT01100000263613.e	ENSGT00940000163927.a.a.cb #25	ENSGT00940000153491.b.b.b.b #26	ENSGT00940000166316.b #27	ENSGT00940000165960.a.b.b.d ##30	ENSGT01010000222656	ENSGT00940000167107.e	ENSGT00940000156646.c.a.a.b	ENSGT00650000094881.a.a	ENSGT00800000125278	ENSGT00950000183121.a.c.b.b	ENSGT00510000050706.b	ENSGT00940000177727.a	ENSGT00940000158001.e
Goldfish	MODERN SPECIES	25	ENSCARG00000062528	ovol1a (ENSCARG00000062511)	mus81 (ENSCARG00000062463)	TMEM151A (ENSCARG00000062450)	tmem179ba (ENSCARG00000062422)	prox3 (ENSCARG00000062406)	snx15 (ENSCARG00000062393)	ENSCARG00000062379	ENSCARG00000062371	BCL6B (ENSCARG00000062355) #15	SLC16A13 (ENSCARG00000062339) #16	acap1 (ENSCARG00000062266) #17	agfg2 (ENSCARG00000062191) #18	ENSCARG00000062164 #19	si:ch73-335l21.4 (ENSCARG00000062152) #20	dvl2 (ENSCARG00000061847) #22	acadvl (ENSCARG00000058232) #23	ENSCARG00000058156	ponzr1 (ENSCARG00000058134) #25	ENSCARG00000058113 #26	ENSCARG00000058100 #27	ENSCARG00000058022	ENSCARG00000057992 ##30	ENSCARG00000057973	ENSCARG00000057950	ENSCARG00000057942	ENSCARG00000057937	ENSCARG00000057931	ENSCARG00000057886	ENSCARG00000057858	ENSCARG00000057868
Cyprininae_a	ANCESTRAL SPECIES	56	ENSGT00940000165739.f.a	ENSGT00390000005498.b	ENSGT00390000013762.a.f.a	ENSGT00510000048151.a.c	ENSGT00940000154790.a.b.b	ENSGT00940000160125.k	ENSGT00940000154273.b.e	ENSGT00940000156022.a #14	ENSGT00940000159844.f #15	ENSGT00940000159372.f #16	ENSGT00940000160289.i #17	ENSGT00940000161071.f #18	ENSGT00940000166370.c #19	ENSGT00730000112287.b #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.j #22	ENSGT00940000158535.`b #23	ENSGT01100000263613.e	ENSGT00940000163927.a.a.cb #25	ENSGT00940000153491.b.b.b.b #26	ENSGT00940000166316.b #27	ENSGT00390000014072.B.f #28	ENSGT00940000165960.a.b.b.d ##30	ENSGT01010000222656	ENSGT00940000167107.e	ENSGT00940000156646.c.a.a.b	ENSGT00800000125278	ENSGT00950000183121.a.c.b.b	ENSGT00510000050706.b	ENSGT00940000177727.a	ENSGT00940000158001.e
Common carp reference	MODERN SPECIES	6	ENSCCRG00000077729	ENSCCRG00000057527	ovol1a (ENSCCRG00000070411)	mus81 (ENSCCRG00000028513)	si:ch211-285j22.3 (ENSCCRG00000081031)	prox3 (ENSCCRG00000052974)	snx15 (ENSCCRG00000057490)	ENSCCRG00000028488	ENSCCRG00000028478 #15	ENSCCRG00000040049 #16	acap1 (ENSCCRG00000067284) #17	agfg2 (ENSCCRG00000028440) #18	ENSCCRG00000034175 #19	si:ch73-335l21.4 (ENSCCRG00000082199) #20	si:ch73-335l21.2 (ENSCCRG00000079520) #21	dvl2 (ENSCCRG00000021583) #22	acadvl (ENSCCRG00000054675) #23	ENSCCRG00000021604	ponzr1 (ENSCCRG00000081415) #25	ENSCCRG00000021610 #26	ENSCCRG00000066145 #27	cnpy4 (ENSCCRG00000021658) #28	ENSCCRG00000079316	ENSCCRG00000057418 ##30	ENSCCRG00000077398	ENSCCRG00000056814	slc3a2a (ENSCCRG00000000400)	ENSCCRG00000077189	sat2a.2 (ENSCCRG00000024255)	tnfsf12 (ENSCCRG00000081345)	ENSCCRG00000024284
Golden-line barbel	MODERN SPECIES	199	ENSSGRG00000046458	ovol1a (ENSSGRG00000046457)	mus81 (ENSSGRG00000046454)	TMEM151A (ENSSGRG00000046453)	tmem179ba (ENSSGRG00000046452)	prox3 (ENSSGRG00000046450)	snx15 (ENSSGRG00000046449)	ENSSGRG00000046448 #14	BCL6B (ENSSGRG00000046447) #15	SLC16A13 (ENSSGRG00000046446) #16	acap1 (ENSSGRG00000046443) #17	agfg2 (ENSSGRG00000046442) #18	ENSSGRG00000046440 #19	si:ch73-335l21.4 (ENSSGRG00000046438) #20	si:ch73-335l21.2 (ENSSGRG00000046437) #21	dvl2 (ENSSGRG00000046435) #22	acadvl (ENSSGRG00000045698) #23	ENSSGRG00000045663	ponzr1 (ENSSGRG00000045661) #25	ENSSGRG00000045659 #26	ENSSGRG00000045602 #27	cnpy4 (ENSSGRG00000045600) #28	ENSSGRG00000045599	slc3a2a (ENSSGRG00000045593)	zpax4 (ENSSGRG00000045589) #11	ENSSGRG00000045587	tnfsf12 (ENSSGRG00000045586)	ENSSGRG00000045585	CHD3 (ENSSGRG00000042076)	cyb5d1 (ENSSGRG00000042018)	dnajc3b (ENSSGRG00000041931)
Zebrafish	MODERN SPECIES	22	TMEM151A (ENSDARG00000077986)	ENSDARG00000100885	si:ch211-285j22.3 (ENSDARG00000100703)	tmem179ba (ENSDARG00000056233)	prox3 (ENSDARG00000088810)	snx15 (ENSDARG00000020397)	ENSDARG00000069331	BCL6B (ENSDARG00000069335) #15	SLC16A13 (ENSDARG00000055342) #16	acap1 (ENSDARG00000056346) #17	agfg2 (ENSDARG00000069334) #18	ENSDARG00000036414 #19	si:ch73-335l21.4 (ENSDARG00000091234) #20	ENSDARG00000105541	si:ch73-335l21.2 (ENSDARG00000105617) #21	dvl2 (ENSDARG00000056184) #22	acadvl (ENSDARG00000016687) #23	ENSDARG00000077414	ponzr1 (ENSDARG00000090444) #25	ENSDARG00000036420 #26	ENSDARG00000036422 #27	cnpy4 (ENSDARG00000055797) #28	ENSDARG00000105585	ENSDARG00000061850 #29	ENSDARG00000100712 ##30	ENSDARG00000105530	zgc:103586 (ENSDARG00000036426)	slc3a2a (ENSDARG00000036427)	zgc:158423 (ENSDARG00000055791)	ENSDARG00000098410	zpax4 (ENSDARG00000079034) #11
Clupeiformes	ANCESTRAL SPECIES	120		ENSGT00940000166370 #19	ENSGT00940000161071 #18	ENSGT00940000160289 #17	ENSGT00940000159372 #16	ENSGT00940000159844 #15	ENSGT00940000156022.a #14	ENSGT00940000176070 #13	ENSGT00940000167160	ENSGT01070000254383	ENSGT00390000013368	ENSGT00600000085600	ENSGT00950000182899.C.b.g	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i #22	ENSGT00940000158535 #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT01030000234567.B.a.b.a.a	ENSGT00390000014072.B #28	ENSGT00940000156128.a #29	ENSGT00940000167107	ENSGT00390000000592	ENSGT00940000165100.b.f	ENSGT00940000165987	ENSGT00440000037582	ENSGT00940000158001	ENSGT00510000050706
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES		acadvl (ENSDCDG00000018419) #23	ENSDCDG00000018410	ENSDCDG00000018406	slx1b (ENSDCDG00000018404)	ENSDCDG00000018403	ENSDCDG00000018400	ENSDCDG00000018397	ENSDCDG00000018395 #14	BCL6B (ENSDCDG00000018389) #15	SLC16A13 (ENSDCDG00000018386) #16	acap1 (ENSDCDG00000014474) #17	agfg2 (ENSDCDG00000014353) #18	ENSDCDG00000014342 #19	si:ch73-335l21.4 (ENSDCDG00000014339) #20	si:ch73-335l21.2 (ENSDCDG00000014334) #21	dvl2 (ENSDCDG00000013898) #22	rell1 (ENSDCDG00000013858) #33	zgc:194930 (ENSDCDG00000013851)	ENSDCDG00000013845	NWD2 (ENSDCDG00000013836) #35	DTHD1 (ENSDCDG00000013827) #36	ENSDCDG00000013821	ENSDCDG00000005472	ENSDCDG00000005470	ENSDCDG00000005172 #37	PCDH7 (ENSDCDG00000005151)	ENSDCDG00000005144	STIM2 (ENSDCDG00000005046)	tbc1d19 (ENSDCDG00000004801)	CCKAR (ENSDCDG00000004766)	RBPJ (ENSDCDG00000004747)
Denticle herring	MODERN SPECIES	23								ENSDCDG00000022588 #14	BCL6B (ENSDCDG00000022583) #15	SLC16A13 (ENSDCDG00000022580) #16	acap1 (ENSDCDG00000019848) #17	agfg2 (ENSDCDG00000019800) #18	ENSDCDG00000019798 #19	si:ch73-335l21.4 (ENSDCDG00000019794) #20	si:ch73-335l21.2 (ENSDCDG00000019792) #21	dvl2 (ENSDCDG00000019643) #22	rell1 (ENSDCDG00000019627) #33	zgc:194930 (ENSDCDG00000019623)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	9	ponzr1 (ENSCHAG00000026106) #25	ENSCHAG00000026109	acadvl (ENSCHAG00000026116) #23	ENSCHAG00000000638	ENSCHAG00000000662	slx1b (ENSCHAG00000000700)	ENSCHAG00000000730	ENSCHAG00000000767	ENSCHAG00000000809	ENSCHAG00000000832 #13	ENSCHAG00000000877 #14	ENSCHAG00000000971 #15	SLC16A13 (ENSCHAG00000000996) #16	acap1 (ENSCHAG00000001229) #17	ENSCHAG00000001740 #19	dvl2 (ENSCHAG00000001757) #22	rell1 (ENSCHAG00000001773) #33	zgc:194930 (ENSCHAG00000001806)	NWD2 (ENSCHAG00000001829) #35	ENSCHAG00000001888	ENSCHAG00000001900	ENSCHAG00000002023	ENSCHAG00000002042	ENSCHAG00000002066	ENSCHAG00000002084	ENSCHAG00000002121	ednrab (ENSCHAG00000002158)	ENSCHAG00000003316	ednrab (ENSCHAG00000003519)	ENSCHAG00000003830	ENSCHAG00000003922
Atlantic herring	MODERN SPECIES	24	ENSCHAG00000018409	capga (ENSCHAG00000018279)	slc25a35 (ENSCHAG00000018248)	rangrf (ENSCHAG00000018244)	ENSCHAG00000018209	grk1b (ENSCHAG00000018194)	ENSCHAG00000018169 ##10	ENSCHAG00000018157 ##12	ENSCHAG00000018146	cldn15b (ENSCHAG00000018141)	sat2b (ENSCHAG00000018098)	sat2b (ENSCHAG00000018090)	ENSCHAG00000018061	ENSCHAG00000018056 ##30	ENSCHAG00000018051 ##30	DVL2 (ENSCHAG00000017981) #22	acadvl (ENSCHAG00000016368) #23	ENSCHAG00000016254	ENSCHAG00000016233	ENSCHAG00000016228	ENSCHAG00000016218	gucy2d (ENSCHAG00000012940)	si:ch211-284e13.11 (ENSCHAG00000012875)	ENSCHAG00000012860	slc12a9 (ENSCHAG00000012698)	gnb2 (ENSCHAG00000012631)	ENSCHAG00000012620	mink1 (ENSCHAG00000005262)	PLD2 (ENSCHAG00000002170)	chrne (ENSCHAG00000001547)	gltpd2b (ENSCHAG00000001492)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	93	ENSGT00390000003738.a.a.d	ENSGT00950000183153.c.a.q	ENSGT00940000163587.a.b.b	ENSGT00940000159305.j	ENSGT00940000154035.a.f.b	ENSGT00940000160771	ENSGT00390000013834	ENSGT00940000165258	ENSGT00940000163503.A.a.a.b ##12	ENSGT00390000000592.ib	ENSGT00940000165100.b.a	ENSGT00950000183121.a.c.a	ENSGT00940000165960.a.a ##30	ENSGT00640000091486.b.bb	ENSGT01030000234567.B.a.b.a.b.a	ENSGT00950000182903.a.b.i.a #22	ENSGT00940000158535.u #23	ENSGT00940000154838.A.f.b.b	ENSGT00940000166953	ENSGT00940000178676	ENSGT00940000164853.a.a.e	ENSGT00990000204023	ENSGT00940000167331.c	ENSGT00940000163913	ENSGT00940000159400	ENSGT01100000263556.a.a.q.d.cb	ENSGT00950000182899.C.b	ENSGT01000000214413.b.b.j	ENSGT00950000183196.A.w	ENSGT00940000160229	ENSGT00940000160933
Asian bonytongue	MODERN SPECIES	13	wnt3 (ENSSFOG00015000492)	ormdl3 (ENSSFOG00015000476)	ENSSFOG00015000434	slc25a35 (ENSSFOG00015000398)	rangrf (ENSSFOG00015000389)	grk1b (ENSSFOG00015000349)	ENSSFOG00015032597 ##10	ENSSFOG00015000241 ##12	fis1 (ENSSFOG00015000211)	cldn15a (ENSSFOG00015000205)	sat2b (ENSSFOG00015027230)	ENSSFOG00015000166	ENSSFOG00015021526 ##30	taf6 (ENSSFOG00015021494)	ENSSFOG00015021464	dvl2 (ENSSFOG00015021435) #22	acadvl (ENSSFOG00015021347) #23	ENSSFOG00015021312	ENSSFOG00015032329	ENSSFOG00015025016 #15	si:ch211-284e13.5 (ENSSFOG00015032825)	pgr (ENSSFOG00015021246)	gucy2d (ENSSFOG00015021100)	eif4e2rs1 (ENSSFOG00015021065)	ENSSFOG00015021029	slc12a9 (ENSSFOG00015021010)	ENSSFOG00015021005	ENSSFOG00015016802	gnb2 (ENSSFOG00015016821)	ENSSFOG00015017047	mink1 (ENSSFOG00015016892)
P. kingsleyae	MODERN SPECIES	208	ENSPKIG00000001714	tp53 (ENSPKIG00000001744)	ENSPKIG00000001780	CAPG (ENSPKIG00000001804)	ENSPKIG00000001826	slc25a35 (ENSPKIG00000001860)	rangrf (ENSPKIG00000001893)	grk1b (ENSPKIG00000001928)	ENSPKIG00000001959 ##12	fis1 (ENSPKIG00000001987)	ENSPKIG00000002003	sat2b (ENSPKIG00000002021)	ENSPKIG00000002044	ENSPKIG00000002057 ##30	ENSPKIG00000002086	dvl2 (ENSPKIG00000002139) #22
Osteoglossiformes	ANCESTRAL SPECIES	52			ENSGT00940000169954	ENSGT00600000085600	ENSGT00390000013368	ENSGT00510000047760	ENSGT01100000263491.a.b.b.c.a.b	ENSGT01090000260185	ENSGT00940000156022.a #14	ENSGT00940000159372 #16	ENSGT00940000160289 #17	ENSGT00940000161071 #18	ENSGT00940000166370.i #19	ENSGT00730000112287 #20	ENSGT00940000174877 #21	ENSGT00950000182903.a.b.i.b #22	ENSGT00940000158535.v #23	ENSGT01100000263613	ENSGT00940000163927.a.a #25	ENSGT00940000153491.b.b.b #26	ENSGT00940000166316 #27	ENSGT00390000014072.B #28	ENSGT00640000091486.b.cb	ENSGT00940000156128.a #29	ENSGT00940000165960.a.b.b ##30	ENSGT00940000167107	ENSGT00390000000592.hb	ENSGT00940000165100.b.b	ENSGT00940000165987	ENSGT00390000018418	ENSGT00440000037582
P. kingsleyae	MODERN SPECIES	275	sult6b1 (ENSPKIG00000007467)	ENSPKIG00000007454	ENSPKIG00000007433	ENSPKIG00000007419	slx1b (ENSPKIG00000007396)	zgc:112271 (ENSPKIG00000007368)	ENSPKIG00000007354	ENSPKIG00000007342	ENSPKIG00000007321 #14	SLC16A13 (ENSPKIG00000007295) #16	acap1 (ENSPKIG00000007239) #17	agfg2 (ENSPKIG00000007184) #18	ENSPKIG00000007153 #19	si:ch73-335l21.4 (ENSPKIG00000007139) #20	si:ch73-335l21.2 (ENSPKIG00000007128) #21	dvl2 (ENSPKIG00000007065) #22	ENSPKIG00000007046	ponzr1 (ENSPKIG00000007023) #25	ENSPKIG00000006978 #26	ENSPKIG00000006945 #27	cnpy4 (ENSPKIG00000006916) #28	taf6 (ENSPKIG00000006892)	ENSPKIG00000006869 #29	ENSPKIG00000006848 ##30	zgc:103586 (ENSPKIG00000006828)	FIS1 (ENSPKIG00000006754)	cldn15a (ENSPKIG00000006689)	dnajc3b (ENSPKIG00000006633)	ENSPKIG00000006614	cyb5d1 (ENSPKIG00000006579)	CHD3 (ENSPKIG00000006305)
Spotted gar	MODERN SPECIES	658	DMWD (ENSLOCG00000014351)	ENSLOCG00000014353	hif1al (ENSLOCG00000014356)	nccrp1 (ENSLOCG00000014359)	zgc:152863 (ENSLOCG00000014363)	pak4 (ENSLOCG00000014365)	ENSLOCG00000017563	ccdc9 (ENSLOCG00000014371)	sae1 (ENSLOCG00000014375)	ZC3H4 (ENSLOCG00000014380)	zgc:154093 (ENSLOCG00000017564)	ercc2 (ENSLOCG00000014383)	dpf1 (ENSLOCG00000014388)	ENSLOCG00000014391	ENSLOCG00000014393	dvl2 (ENSLOCG00000014396) #22	acadvl (ENSLOCG00000014404) #23	ENSLOCG00000014411	ponzr1 (ENSLOCG00000014412) #25	ENSLOCG00000014415	ENSLOCG00000014441 #26	ENSLOCG00000014453 #27	ENSLOCG00000014455	ENSLOCG00000014456	mpdu1b (ENSLOCG00000014460)	sox19a (ENSLOCG00000014463)	eif4a1a (ENSLOCG00000014465)	senp3a (ENSLOCG00000014470)	tnk1 (ENSLOCG00000014472)	plscr3b (ENSLOCG00000014476)	phf23b (ENSLOCG00000014481)