Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Glires	ANCESTRAL SPECIES	21	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Muroidea	ANCESTRAL SPECIES	47	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Murinae	ANCESTRAL SPECIES	23	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37	ENSGT00940000154078.a.b
Mus	ANCESTRAL SPECIES	6	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b #33	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b #33	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Ryukyu mouse	MODERN SPECIES	17	Cope (MGP_CAROLIEiJ_G0031140) #7	Ddx49 (MGP_CAROLIEiJ_G0031139) #8	Homer3 (MGP_CAROLIEiJ_G0031138) #9	Sugp2 (MGP_CAROLIEiJ_G0031137) #10	Armc6 (MGP_CAROLIEiJ_G0031136) #11	Slc25a42 (MGP_CAROLIEiJ_G0031135) #12	Tmem161a (MGP_CAROLIEiJ_G0031134) #13	MGP_CAROLIEiJ_G0031133 #14	MGP_CAROLIEiJ_G0031132 #15	Nr2c2ap (MGP_CAROLIEiJ_G0031131) #16	Rfxank (MGP_CAROLIEiJ_G0031130) #17	Ncan (MGP_CAROLIEiJ_G0031129) #18	Hapln4 (MGP_CAROLIEiJ_G0031128) #19	Tm6sf2 (MGP_CAROLIEiJ_G0031127) #20	Sugp1 (MGP_CAROLIEiJ_G0031126) #21	Mau2 (MGP_CAROLIEiJ_G0031125) #22	Gatad2a (MGP_CAROLIEiJ_G0031124) #23	Tssk6 (MGP_CAROLIEiJ_G0031123) #24	Ndufa13 (MGP_CAROLIEiJ_G0031122) #25	Yjefn3 (MGP_CAROLIEiJ_G0031121) #26	Cilp2 (MGP_CAROLIEiJ_G0031120) #27	Pbx4 (MGP_CAROLIEiJ_G0031119) #28	Lpar2 (MGP_CAROLIEiJ_G0031118) #29	Gmip (MGP_CAROLIEiJ_G0031117) #30	Atp13a1 (MGP_CAROLIEiJ_G0031116) #31	Zfp866 (MGP_CAROLIEiJ_G0031115) #32	MGP_CAROLIEiJ_G0031114 #33	Zfp963 (MGP_CAROLIEiJ_G0031113) #34	Zfp869 (MGP_CAROLIEiJ_G0031112) #35	Zfp964 (MGP_CAROLIEiJ_G0031111) #36	Zfp868 (MGP_CAROLIEiJ_G0031110) #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b #33	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Mouse	MODERN SPECIES	17	Cope (ENSMUSG00000055681) #7	Ddx49 (ENSMUSG00000057788) #8	Homer3 (ENSMUSG00000003573) #9	Sugp2 (ENSMUSG00000036054) #10	Armc6 (ENSMUSG00000002343) #11	Slc25a42 (ENSMUSG00000002346) #12	Tmem161a (ENSMUSG00000002342) #13	Mef2b (ENSMUSG00000079033) #14	Borcs8 (ENSMUSG00000002345)	Nr2c2ap (ENSMUSG00000071078) #16	Rfxank (ENSMUSG00000036120) #17	Ncan (ENSMUSG00000002341) #18	Hapln4 (ENSMUSG00000007594) #19	Tm6sf2 (ENSMUSG00000036151) #20	Sugp1 (ENSMUSG00000011306) #21	Mau2 (ENSMUSG00000031858) #22	Gatad2a (ENSMUSG00000036180) #23	Tssk6 (ENSMUSG00000047654) #24	Ndufa13 (ENSMUSG00000036199) #25	Yjefn3 (ENSMUSG00000048967) #26	Cilp2 (ENSMUSG00000044006) #27	Pbx4 (ENSMUSG00000031860) #28	Lpar2 (ENSMUSG00000031861) #29	Gmip (ENSMUSG00000036246) #30	Atp13a1 (ENSMUSG00000031862) #31	Zfp866 (ENSMUSG00000043090) #32	Gm20422 (ENSMUSG00000092544)	Zfp963 (ENSMUSG00000092260) #34	Zfp869 (ENSMUSG00000054648) #35	Zfp964 (ENSMUSG00000091764) #36	Zfp868 (ENSMUSG00000060427) #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b #33	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Steppe mouse	MODERN SPECIES	2734	Cope (ENSMSIG00000032053) #7	Ddx49 (ENSMSIG00000032052) #8	Homer3 (ENSMSIG00000032051) #9	Sugp2 (ENSMSIG00000032050) #10	Armc6 (ENSMSIG00000032049) #11	Slc25a42 (ENSMSIG00000032048) #12	Tmem161a (ENSMSIG00000032047) #13	ENSMSIG00000032046 #14	Borcs8 (ENSMSIG00000032045)	Rfxank (ENSMSIG00000032044) #17	Nr2c2ap (ENSMSIG00000032043) #16	Ncan (ENSMSIG00000032040) #18	Hapln4 (ENSMSIG00000032039) #19	Tm6sf2 (ENSMSIG00000032038) #20	Sugp1 (ENSMSIG00000032037) #21	Mau2 (ENSMSIG00000032036) #22	Gatad2a (ENSMSIG00000032035) #23	Tssk6 (ENSMSIG00000032034) #24	Ndufa13 (ENSMSIG00000032033) #25	Yjefn3 (ENSMSIG00000032032) #26	Cilp2 (ENSMSIG00000032031) #27	Pbx4 (ENSMSIG00000032030) #28
spretus	MODERN SPECIES	17	Cope (MGP_SPRETEiJ_G0032258) #7	Ddx49 (MGP_SPRETEiJ_G0032257) #8	Homer3 (MGP_SPRETEiJ_G0032256) #9	Sugp2 (MGP_SPRETEiJ_G0032255) #10	Armc6 (MGP_SPRETEiJ_G0032254) #11	Slc25a42 (MGP_SPRETEiJ_G0032253) #12	Tmem161a (MGP_SPRETEiJ_G0032252) #13	MGP_SPRETEiJ_G0032251 #14	MGP_SPRETEiJ_G0032250 #14	Nr2c2ap (MGP_SPRETEiJ_G0032249) #16	Rfxank (MGP_SPRETEiJ_G0032248) #17	Ncan (MGP_SPRETEiJ_G0032247) #18	Hapln4 (MGP_SPRETEiJ_G0032246) #19	Tm6sf2 (MGP_SPRETEiJ_G0032245) #20	Sugp1 (MGP_SPRETEiJ_G0032244) #21	Mau2 (MGP_SPRETEiJ_G0032243) #22	Gatad2a (MGP_SPRETEiJ_G0032242) #23	Tssk6 (MGP_SPRETEiJ_G0032241) #24	Ndufa13 (MGP_SPRETEiJ_G0032240) #25	Yjefn3 (MGP_SPRETEiJ_G0032239) #26	Cilp2 (MGP_SPRETEiJ_G0032238) #27	Pbx4 (MGP_SPRETEiJ_G0032237) #28	Lpar2 (MGP_SPRETEiJ_G0032236) #29	Gmip (MGP_SPRETEiJ_G0032235) #30	Atp13a1 (MGP_SPRETEiJ_G0032234) #31	Zfp866 (MGP_SPRETEiJ_G0032233) #32	MGP_SPRETEiJ_G0032232 #33	Zfp963 (MGP_SPRETEiJ_G0032231) #34	Zfp869 (MGP_SPRETEiJ_G0032230) #35	Zfp964 (MGP_SPRETEiJ_G0032229) #36	Zfp868 (MGP_SPRETEiJ_G0032228) #37
Shrew mouse	MODERN SPECIES	10	Cope (MGP_PahariEiJ_G0021605) #7	Ddx49 (MGP_PahariEiJ_G0021604) #8	Homer3 (MGP_PahariEiJ_G0021603) #9	Sugp2 (MGP_PahariEiJ_G0021602) #10	Armc6 (MGP_PahariEiJ_G0021601) #11	Slc25a42 (MGP_PahariEiJ_G0021600) #12	Tmem161a (MGP_PahariEiJ_G0021599) #13	MGP_PahariEiJ_G0021598 #14	MGP_PahariEiJ_G0021597 #14	Nr2c2ap (MGP_PahariEiJ_G0021596) #16	Rfxank (MGP_PahariEiJ_G0021595) #17	Ncan (MGP_PahariEiJ_G0021594) #18	Hapln4 (MGP_PahariEiJ_G0021593) #19	Tm6sf2 (MGP_PahariEiJ_G0021592) #20	Sugp1 (MGP_PahariEiJ_G0021591) #21	Mau2 (MGP_PahariEiJ_G0021590) #22	Gatad2a (MGP_PahariEiJ_G0021589) #23	Tssk6 (MGP_PahariEiJ_G0021588) #24	Ndufa13 (MGP_PahariEiJ_G0021587) #25	Yjefn3 (MGP_PahariEiJ_G0021586) #26	Cilp2 (MGP_PahariEiJ_G0021585) #27	Pbx4 (MGP_PahariEiJ_G0021584) #28	Lpar2 (MGP_PahariEiJ_G0021583) #29	Gmip (MGP_PahariEiJ_G0021582) #30	Atp13a1 (MGP_PahariEiJ_G0021581) #31	Zfp866 (MGP_PahariEiJ_G0021580) #32	MGP_PahariEiJ_G0021579 #33	Zfp963 (MGP_PahariEiJ_G0021578) #34	Zfp869 (MGP_PahariEiJ_G0021577) #35	Zfp964 (MGP_PahariEiJ_G0021576) #36	Zfp868 (MGP_PahariEiJ_G0021575) #37
Rat	MODERN SPECIES	7	Cope (ENSRNOG00000020178) #7	Ddx49 (ENSRNOG00000022368) #8	Homer3 (ENSRNOG00000020229) #9	Sugp2 (ENSRNOG00000020269) #10	Armc6 (ENSRNOG00000020280) #11	Slc25a42 (ENSRNOG00000020345) #12	Tmem161a (ENSRNOG00000020390) #13	Mef2b (ENSRNOG00000020400) #14	Borcs8 (ENSRNOG00000020427)	Rfxank (ENSRNOG00000033318) #17	Nr2c2ap (ENSRNOG00000022247) #16	Ncan (ENSRNOG00000048036) #18	Hapln4 (ENSRNOG00000049949) #19	Tm6sf2 (ENSRNOG00000042237) #20	Sugp1 (ENSRNOG00000052111) #21	Mau2 (ENSRNOG00000020526) #22	Gatad2a (ENSRNOG00000022173) #23	Tssk6 (ENSRNOG00000020599) #24	Ndufa13 (ENSRNOG00000020602) #25	Yjefn3 (ENSRNOG00000039191) #26	Cilp2 (ENSRNOG00000020622) #27	Pbx4 (ENSRNOG00000010736) #28	Lpar2 (ENSRNOG00000010758) #29	Gmip (ENSRNOG00000027257) #30	Atp13a1 (ENSRNOG00000010776) #31	LOC108348302 (ENSRNOG00000011492) #32	Zfp866 (ENSRNOG00000042580) #34	Zfp869 (ENSRNOG00000033351) #35	Zfp964 (ENSRNOG00000042504) #36	LOC102551257 (ENSRNOG00000067812)	Zfp868 (ENSRNOG00000028919) #37
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Prairie vole	MODERN SPECIES	164	Cope (ENSMOCG00000014940) #7	Ddx49 (ENSMOCG00000018690) #8	Homer3 (ENSMOCG00000013590) #9	Sugp2 (ENSMOCG00000009704) #10	Armc6 (ENSMOCG00000014288) #11	Slc25a42 (ENSMOCG00000012570) #12	Tmem161a (ENSMOCG00000018852) #13	Mef2b (ENSMOCG00000000308) #14	ENSMOCG00000008996	Rfxank (ENSMOCG00000021751) #17	Nr2c2ap (ENSMOCG00000003423) #16	Ncan (ENSMOCG00000020207) #18	Hapln4 (ENSMOCG00000000353) #19	Tm6sf2 (ENSMOCG00000018885) #20	Sugp1 (ENSMOCG00000014670) #21	Mau2 (ENSMOCG00000003213) #22	Gatad2a (ENSMOCG00000001060) #23	Tssk6 (ENSMOCG00000007466) #24	Ndufa13 (ENSMOCG00000015070) #25	Yjefn3 (ENSMOCG00000019664) #26	Cilp2 (ENSMOCG00000018051) #27	Pbx4 (ENSMOCG00000001326) #28	Lpar2 (ENSMOCG00000014804) #29	ENSMOCG00000019025	Atp13a1 (ENSMOCG00000001496) #31	Zfp866 (ENSMOCG00000007573) #32	Zfp963 (ENSMOCG00000016227) #34	Zfp869 (ENSMOCG00000001013) #35	Zfp964 (ENSMOCG00000003187) #36	Zfp868 (ENSMOCG00000002776) #37
Northern American deer mouse	MODERN SPECIES	8	Cope (ENSPEMG00000018557) #7	Ddx49 (ENSPEMG00000009238) #8	Homer3 (ENSPEMG00000016382) #9	Sugp2 (ENSPEMG00000009700) #10	Armc6 (ENSPEMG00000012468) #11	Slc25a42 (ENSPEMG00000011354) #12	Tmem161a (ENSPEMG00000016451) #13	Mef2b (ENSPEMG00000018054) #14	Borcs8 (ENSPEMG00000010340)	Rfxank (ENSPEMG00000007761) #17	Nr2c2ap (ENSPEMG00000001962) #16	Ncan (ENSPEMG00000012564) #18	Hapln4 (ENSPEMG00000029211) #19	Tm6sf2 (ENSPEMG00000016397) #20	Sugp1 (ENSPEMG00000009253) #21	Mau2 (ENSPEMG00000016559) #22	Gatad2a (ENSPEMG00000012515) #23	Tssk6 (ENSPEMG00000007183) #24	Ndufa13 (ENSPEMG00000007743) #25	Yjefn3 (ENSPEMG00000011764) #26	Cilp2 (ENSPEMG00000008010) #27	Pbx4 (ENSPEMG00000010841) #28	Lpar2 (ENSPEMG00000012110) #29	Gmip (ENSPEMG00000006786) #30	Atp13a1 (ENSPEMG00000018771) #31	Zfp866 (ENSPEMG00000012624) #32	Zfp963 (ENSPEMG00000011994) #34	Zfp869 (ENSPEMG00000000596) #35	Zfp964 (ENSPEMG00000010305) #36	Zfp868 (ENSPEMG00000006111) #37	ENSPEMG00000026319
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #36	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #37
Chinese hamster chok1gshd	MODERN SPECIES	184	COPE (ENSCGRG00001024248) #7	Ddx49 (ENSCGRG00001009467) #8	Homer3 (ENSCGRG00001014952) #9	Sugp2 (ENSCGRG00001018264) #10	Armc6 (ENSCGRG00001019296) #11	Slc25a42 (ENSCGRG00001022045) #12	Tmem161a (ENSCGRG00001022808) #13	Mef2b (ENSCGRG00001014460) #14	Borcs8 (ENSCGRG00001020163)	Rfxank (ENSCGRG00001000782) #17	Nr2c2ap (ENSCGRG00001011302) #16	Ncan (ENSCGRG00001015055) #18	Hapln4 (ENSCGRG00001018509) #19	Tm6sf2 (ENSCGRG00001019424) #20	Sugp1 (ENSCGRG00001021250) #21	Mau2 (ENSCGRG00001009180) #22	Gatad2a (ENSCGRG00001018413) #23	Tssk6 (ENSCGRG00001010147) #24	Ndufa13 (ENSCGRG00001022785) #25	Yjefn3 (ENSCGRG00001023789) #26	Cilp2 (ENSCGRG00001007338) #27	Pbx4 (ENSCGRG00001014693) #28	Lpar2 (ENSCGRG00001015085) #29	Gmip (ENSCGRG00001000197) #30	Atp13a1 (ENSCGRG00001012808) #31	Zfp866 (ENSCGRG00001019443) #32	Zfp963 (ENSCGRG00001021819) #34	Zfp869 (ENSCGRG00001022854) #35	Zfp964 (ENSCGRG00001016061) #36	Zfp868 (ENSCGRG00001024449) #37	ENSCGRG00001007777
Golden Hamster	MODERN SPECIES	831	Cope (ENSMAUG00000016322) #7	Ddx49 (ENSMAUG00000010235) #8	Homer3 (ENSMAUG00000014150) #9	Sugp2 (ENSMAUG00000011371) #10	Armc6 (ENSMAUG00000011324) #11	Slc25a42 (ENSMAUG00000018082) #12	Tmem161a (ENSMAUG00000011694) #13	Mef2b (ENSMAUG00000006774) #14	Borcs8 (ENSMAUG00000014785)	Rfxank (ENSMAUG00000002477) #17	Nr2c2ap (ENSMAUG00000003921) #16	Ncan (ENSMAUG00000007276) #18	Hapln4 (ENSMAUG00000011983) #19	Tm6sf2 (ENSMAUG00000001556) #20	Sugp1 (ENSMAUG00000016683) #21	Mau2 (ENSMAUG00000021335) #22	Gatad2a (ENSMAUG00000021128) #23	Tssk6 (ENSMAUG00000008397) #24	Ndufa13 (ENSMAUG00000019158) #25	Yjefn3 (ENSMAUG00000021666) #26	Cilp2 (ENSMAUG00000005034) #27	Pbx4 (ENSMAUG00000000855) #28	Lpar2 (ENSMAUG00000020957) #29	Gmip (ENSMAUG00000020071) #30	Atp13a1 (ENSMAUG00000022087) #31	Zfp866 (ENSMAUG00000013777) #32	Zfp963 (ENSMAUG00000012846) #34	Zfp964 (ENSMAUG00000017867) #36	Zfp868 (ENSMAUG00000007713) #37	ENSMAUG00000000837
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Cope (ENSNGAG00000022394) #7	Ddx49 (ENSNGAG00000019673) #8	Homer3 (ENSNGAG00000015803) #9	Sugp2 (ENSNGAG00000005936) #10	Armc6 (ENSNGAG00000021205) #11	Slc25a42 (ENSNGAG00000023980) #12	Tmem161a (ENSNGAG00000023788) #13	Mef2b (ENSNGAG00000010342) #14	Borcs8 (ENSNGAG00000023653)	Rfxank (ENSNGAG00000012986) #17	Nr2c2ap (ENSNGAG00000010770) #16	Ncan (ENSNGAG00000022597) #18	Hapln4 (ENSNGAG00000014554) #19	Tm6sf2 (ENSNGAG00000020192) #20	Sugp1 (ENSNGAG00000018965) #21	Mau2 (ENSNGAG00000015571) #22	Gatad2a (ENSNGAG00000004469) #23	Tssk6 (ENSNGAG00000001299) #24	Ndufa13 (ENSNGAG00000023080) #25	Yjefn3 (ENSNGAG00000021673) #26	Cilp2 (ENSNGAG00000011748) #27	Pbx4 (ENSNGAG00000013031) #28	Lpar2 (ENSNGAG00000022925) #29	Gmip (ENSNGAG00000012947) #30	Atp13a1 (ENSNGAG00000021636) #31	Zfp866 (ENSNGAG00000012916) #32	ENSNGAG00000022982 ##32	Zfp869 (ENSNGAG00000024282) #35	Zfp868 (ENSNGAG00000021523) #37
Lesser Egyptian jerboa	MODERN SPECIES	127	Comp (ENSJJAG00000011685)	Upf1 (ENSJJAG00000023151)	ENSJJAG00000000262	ENSJJAG00000016264	Cope (ENSJJAG00000017037) #7	Homer3 (ENSJJAG00000014551) #9	Sugp2 (ENSJJAG00000005264) #10	Armc6 (ENSJJAG00000014237) #11	Slc25a42 (ENSJJAG00000018672) #12	Mef2b (ENSJJAG00000009955) #14	Nr2c2ap (ENSJJAG00000023882) #16	Ncan (ENSJJAG00000018295) #18	Hapln4 (ENSJJAG00000016332) #19	Tm6sf2 (ENSJJAG00000023997) #20	Sugp1 (ENSJJAG00000013477) #21	Mau2 (ENSJJAG00000021815) #22	Gatad2a (ENSJJAG00000014763) #23	Tssk6 (ENSJJAG00000006030) #24	Ndufa13 (ENSJJAG00000021903) #25	Pbx4 (ENSJJAG00000010902) #28	Lpar2 (ENSJJAG00000022302) #29	Gmip (ENSJJAG00000013017) #30	Atp13a1 (ENSJJAG00000010806) #31	Mvb12a (ENSJJAG00000019047)	Ccdc194 (ENSJJAG00000013119)	Plvap (ENSJJAG00000000206)	Ano8 (ENSJJAG00000011527)	Dda1 (ENSJJAG00000021059)	Mrpl34 (ENSJJAG00000018808)	Abhd8 (ENSJJAG00000010342)	Ankle1 (ENSJJAG00000014888)
Kangaroo rat	MODERN SPECIES	427	ENSDORG00000023557	Cope (ENSDORG00000004298) #7	Ddx49 (ENSDORG00000004301) #8	ENSDORG00000004302 #9	Sugp2 (ENSDORG00000011519) #10	ENSDORG00000004418 #11	Slc25a42 (ENSDORG00000010998) #12	ENSDORG00000010999 #13	ENSDORG00000011003 #14	Borcs8 (ENSDORG00000027906)	Rfxank (ENSDORG00000001449) #17	Nr2c2ap (ENSDORG00000001440) #16	Hapln4 (ENSDORG00000004912) #19	Tm6sf2 (ENSDORG00000004913) #20	ENSDORG00000024315 #21	Mau2 (ENSDORG00000004918) #22	Gatad2a (ENSDORG00000008536) #23	Tssk6 (ENSDORG00000008538) #24	Lpar2 (ENSDORG00000023437) #29	Gmip (ENSDORG00000005179) #30	Atp13a1 (ENSDORG00000005185) #31	ENSDORG00000012240	ENSDORG00000027508	Rab8a (ENSDORG00000028823)	Cib3 (ENSDORG00000002313)	Fam32a (ENSDORG00000027872)	Eps15l1 (ENSDORG00000012303)	Calr3 (ENSDORG00000013084)	Cherp (ENSDORG00000027623)	Med26 (ENSDORG00000012119)	Slc35e1 (ENSDORG00000012110)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00940000159742	ENSGT00940000158279	ENSGT00940000156347
Marmotini	ANCESTRAL SPECIES	12	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.l ##32	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00940000159742
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.l ##32	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00390000018390.yb
Arctic ground squirrel	MODERN SPECIES	73	COPE (ENSUPAG00010018276) #7	DDX49 (ENSUPAG00010018246) #8	HOMER3 (ENSUPAG00010018230) #9	SUGP2 (ENSUPAG00010018216) #10	ARMC6 (ENSUPAG00010018208) #11	SLC25A42 (ENSUPAG00010018191) #12	TMEM161A (ENSUPAG00010018179) #13	MEF2B (ENSUPAG00010018172) #14	BORCS8 (ENSUPAG00010018165)	RFXANK (ENSUPAG00010018152) #17	NR2C2AP (ENSUPAG00010018146) #16	NCAN (ENSUPAG00010018127) #18	HAPLN4 (ENSUPAG00010018121) #19	TM6SF2 (ENSUPAG00010018116) #20	SUGP1 (ENSUPAG00010018104) #21	MAU2 (ENSUPAG00010018075) #22	GATAD2A (ENSUPAG00010018036) #23	TSSK6 (ENSUPAG00010018027) #24	YJEFN3 (ENSUPAG00010018017) #26	CILP2 (ENSUPAG00010018008) #27	PBX4 (ENSUPAG00010017995) #28	LPAR2 (ENSUPAG00010017989) #29	GMIP (ENSUPAG00010017934) #30	ATP13A1 (ENSUPAG00010017873) #31	ENSUPAG00010017861 ##32	ENSUPAG00010017854	ENSUPAG00010017852	CAMP (ENSUPAG00010017843)	ENSUPAG00010017839	CDC25A (ENSUPAG00010017812)	ENSUPAG00010017794
Squirrel	MODERN SPECIES	196	COPE (ENSSTOG00000006736) #7	DDX49 (ENSSTOG00000006749) #8	HOMER3 (ENSSTOG00000029095) #9	SUGP2 (ENSSTOG00000026887) #10	ARMC6 (ENSSTOG00000012997) #11	SLC25A42 (ENSSTOG00000022047) #12	TMEM161A (ENSSTOG00000005867) #13	MEF2B (ENSSTOG00000005895) #14	BORCS8 (ENSSTOG00000025422)	RFXANK (ENSSTOG00000024080) #17	NR2C2AP (ENSSTOG00000001006) #16	NCAN (ENSSTOG00000001012) #18	HAPLN4 (ENSSTOG00000007240) #19	TM6SF2 (ENSSTOG00000025054) #20	SUGP1 (ENSSTOG00000001020) #21	MAU2 (ENSSTOG00000001026) #22	GATAD2A (ENSSTOG00000022640) #23	TSSK6 (ENSSTOG00000021351) #24	NDUFA13 (ENSSTOG00000022888) #25	YJEFN3 (ENSSTOG00000023979) #26	CILP2 (ENSSTOG00000026823) #27	ENSSTOG00000019762	PBX4 (ENSSTOG00000007166) #28	LPAR2 (ENSSTOG00000021678) #29	GMIP (ENSSTOG00000007176) #30	ATP13A1 (ENSSTOG00000007205) #31	CAMP (ENSSTOG00000015157)	ENSSTOG00000034924	CDC25A (ENSSTOG00000015144)	ENSSTOG00000024015	ENSSTOG00000026772
Alpin marmot	MODERN SPECIES	24	COPE (ENSMMMG00000002634) #7	DDX49 (ENSMMMG00000002658) #8	HOMER3 (ENSMMMG00000002691) #9	SUGP2 (ENSMMMG00000002743) #10	ARMC6 (ENSMMMG00000002877) #11	SLC25A42 (ENSMMMG00000002914) #12	TMEM161A (ENSMMMG00000002937) #13	MEF2B (ENSMMMG00000002982) #14	BORCS8 (ENSMMMG00000003015)	RFXANK (ENSMMMG00000003029) #17	NR2C2AP (ENSMMMG00000003044) #16	NCAN (ENSMMMG00000003066) #18	HAPLN4 (ENSMMMG00000003386) #19	TM6SF2 (ENSMMMG00000003397) #20	SUGP1 (ENSMMMG00000003416) #21	MAU2 (ENSMMMG00000003432) #22	GATAD2A (ENSMMMG00000003539) #23	TSSK6 (ENSMMMG00000003603) #24	NDUFA13 (ENSMMMG00000003609) #25	YJEFN3 (ENSMMMG00000003614) #26	CILP2 (ENSMMMG00000003635) #27	PBX4 (ENSMMMG00000003652) #28	ENSMMMG00000003669	LPAR2 (ENSMMMG00000003676) #29	GMIP (ENSMMMG00000003685) #30	ATP13A1 (ENSMMMG00000003751) #31	ENSMMMG00000003843 ##32	ENSMMMG00000003852	ENSMMMG00000003860	ENSMMMG00000003867	ENSMMMG00000003887
Eurasian red squirrel	MODERN SPECIES	7	DDX49 (ENSSVLG00005016654) #8	HOMER3 (ENSSVLG00005016701) #9	SUGP2 (ENSSVLG00005016823) #10	ARMC6 (ENSSVLG00005016951) #11	SLC25A42 (ENSSVLG00005017005) #12	TMEM161A (ENSSVLG00005017057) #13	MEF2B (ENSSVLG00005017215) #14	BORCS8 (ENSSVLG00005017305)	RFXANK (ENSSVLG00005017362) #17	NR2C2AP (ENSSVLG00005017403) #16	NCAN (ENSSVLG00005017503) #18	ENSSVLG00005017692	HAPLN4 (ENSSVLG00005017756) #19	TM6SF2 (ENSSVLG00005017792) #20	SUGP1 (ENSSVLG00005017843) #21	MAU2 (ENSSVLG00005017993) #22	GATAD2A (ENSSVLG00005018054) #23	TSSK6 (ENSSVLG00005018119) #24	NDUFA13 (ENSSVLG00005018132) #25	YJEFN3 (ENSSVLG00005018175) #26	CILP2 (ENSSVLG00005018243) #27	PBX4 (ENSSVLG00005018272) #28	LPAR2 (ENSSVLG00005018364) #29	GMIP (ENSSVLG00005018416) #30	ATP13A1 (ENSSVLG00005018497) #31	ENSSVLG00005018537 ##32	ENSSVLG00005018572	ENSSVLG00005018591	ZNF670 (ENSSVLG00005018638)	ENSSVLG00005018685	ENSSVLG00005018729
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000006789 #8	HOMER3 (ENSHGLG00000006851) #9	ARMC6 (ENSHGLG00000008147) #11	SLC25A42 (ENSHGLG00000008826) #12	TMEM161A (ENSHGLG00000009517) #13	ENSHGLG00000003123 #14	MEF2BNB (ENSHGLG00000047513)	RFXANK (ENSHGLG00000003396) #17	NR2C2AP (ENSHGLG00000033726) #16	NCAN (ENSHGLG00000034381) #18	HAPLN4 (ENSHGLG00000003896) #19	TM6SF2 (ENSHGLG00000004113) #20	ENSHGLG00000042474 #21	ENSHGLG00000039617 #10	ENSHGLG00000048186 #21	ENSHGLG00000049094 #22	GATAD2A (ENSHGLG00000003176) #23	TSSK6 (ENSHGLG00000020778) #24	NDUFA13 (ENSHGLG00000018628) #25	YJEFN3 (ENSHGLG00000019524) #26	CILP2 (ENSHGLG00000018931) #27	LPAR2 (ENSHGLG00000035704) #29	ENSHGLG00000013806 #30	ENSHGLG00000003184	ENSHGLG00000042271	ENSHGLG00000044603	ENSHGLG00000046812	ENSHGLG00000039559	ENSHGLG00000049921	ENSHGLG00000020580	ENSHGLG00000021231
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163
Guinea pig	MODERN SPECIES	72	CERS1 (ENSCPOG00000033783)	COPE (ENSCPOG00000013624) #7	DDX49 (ENSCPOG00000013626) #8	HOMER3 (ENSCPOG00000004565) #9	SUGP2 (ENSCPOG00000006372) #10	ARMC6 (ENSCPOG00000006374) #11	SLC25A42 (ENSCPOG00000013086) #12	TMEM161A (ENSCPOG00000013640) #13	MEF2B (ENSCPOG00000032781) #14	BORCS8 (ENSCPOG00000036178)	RFXANK (ENSCPOG00000003121) #17	NR2C2AP (ENSCPOG00000032927) #16	HAPLN4 (ENSCPOG00000023683) #19	TM6SF2 (ENSCPOG00000022916) #20	SUGP1 (ENSCPOG00000007797) #21	MAU2 (ENSCPOG00000003755) #22	GATAD2A (ENSCPOG00000015396) #23	TSSK6 (ENSCPOG00000024320) #24	NDUFA13 (ENSCPOG00000019995) #25	YJEFN3 (ENSCPOG00000023842) #26	CILP2 (ENSCPOG00000007219) #27	LPAR2 (ENSCPOG00000012652) #29	GMIP (ENSCPOG00000011161) #30	ATP13A1 (ENSCPOG00000011167) #31	ENSCPOG00000022796
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b
Long-tailed chinchilla	MODERN SPECIES	231	COPE (ENSCLAG00000003621) #7	DDX49 (ENSCLAG00000012844) #8	HOMER3 (ENSCLAG00000011599) #9	SUGP2 (ENSCLAG00000011375) #10	ARMC6 (ENSCLAG00000008215) #11	SLC25A42 (ENSCLAG00000008004) #12	TMEM161A (ENSCLAG00000007578) #13	MEF2B (ENSCLAG00000007377) #14	BORCS8 (ENSCLAG00000004959)	RFXANK (ENSCLAG00000004632) #17	NR2C2AP (ENSCLAG00000004378) #16	NCAN (ENSCLAG00000004140) #18	HAPLN4 (ENSCLAG00000003955) #19	TM6SF2 (ENSCLAG00000003633) #20	SUGP1 (ENSCLAG00000003512) #21	MAU2 (ENSCLAG00000006535) #22	GATAD2A (ENSCLAG00000010160) #23	TSSK6 (ENSCLAG00000018107) #24	NDUFA13 (ENSCLAG00000016915) #25	YJEFN3 (ENSCLAG00000016158) #26	CILP2 (ENSCLAG00000015928) #27	LPAR2 (ENSCLAG00000016969) #29	GMIP (ENSCLAG00000008010) #30	ATP13A1 (ENSCLAG00000009549) #31	ENSCLAG00000007428	ENSCLAG00000007229	DDX11 (ENSCLAG00000007090)	ENSCLAG00000006498 ##32	ENSCLAG00000006263 ##32	TPM4 (ENSCLAG00000006213)	RAB8A (ENSCLAG00000006073)
Degu	MODERN SPECIES	323	COPE (ENSODEG00000011547) #7	DDX49 (ENSODEG00000011203) #8	HOMER3 (ENSODEG00000014870) #9	SUGP2 (ENSODEG00000012058) #10	ARMC6 (ENSODEG00000012613) #11	SLC25A42 (ENSODEG00000012168) #12	TMEM161A (ENSODEG00000012343) #13	MEF2B (ENSODEG00000012357) #14	BORCS8 (ENSODEG00000013003)	RFXANK (ENSODEG00000013006) #17	NR2C2AP (ENSODEG00000011486) #16	NCAN (ENSODEG00000011699) #18	HAPLN4 (ENSODEG00000011689) #19	TM6SF2 (ENSODEG00000010936) #20	SUGP1 (ENSODEG00000011538) #21	MAU2 (ENSODEG00000012887) #22	GATAD2A (ENSODEG00000013506) #23	TSSK6 (ENSODEG00000020032) #24	NDUFA13 (ENSODEG00000013435) #25	YJEFN3 (ENSODEG00000011107) #26	CILP2 (ENSODEG00000010764) #27	LPAR2 (ENSODEG00000010920) #29	GMIP (ENSODEG00000010205) #30	ATP13A1 (ENSODEG00000010691) #31	ENSODEG00000019897	ENSODEG00000011452	ENSODEG00000010301	ENSODEG00000011437
Lagomorpha	ANCESTRAL SPECIES	270											ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24
Rabbit	MODERN SPECIES	858															ENSOCUG00000038816 #21	MAU2 (ENSOCUG00000002263) #22	GATAD2A (ENSOCUG00000017513) #23	ENSOCUG00000039262	TSSK6 (ENSOCUG00000026975) #24
Pika	MODERN SPECIES	3990											NR2C2AP (ENSOPRG00000004162) #16	NCAN (ENSOPRG00000004179) #18	HAPLN4 (ENSOPRG00000004236) #19	ENSOPRG00000018692 #20	SUGP1 (ENSOPRG00000004247) #21	ENSOPRG00000018947 #22
Tree shrew	MODERN SPECIES	3502																MAU2 (ENSTBEG00000015497) #22	GATAD2A (ENSTBEG00000015854) #23
Primates	ANCESTRAL SPECIES	18	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00390000001014	ENSGT00940000161356	ENSGT00390000010067	ENSGT00940000160728
Catarrhini	ANCESTRAL SPECIES		ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b	ENSGT00940000165698.B
Hominoidea	ANCESTRAL SPECIES		ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00490000043385.u.a.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Hominidae	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00490000043385.u.a.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00490000043385.u.a.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Gorilla	MODERN SPECIES	10	COPE (ENSGGOG00000006987) #7	DDX49 (ENSGGOG00000037966) #8	HOMER3 (ENSGGOG00000007011) #9	SUGP2 (ENSGGOG00000013540) #10	ARMC6 (ENSGGOG00000006708) #11	SLC25A42 (ENSGGOG00000008113) #12	TMEM161A (ENSGGOG00000022481) #13	MEF2B (ENSGGOG00000009730) #14	BORCS8 (ENSGGOG00000044155)	RFXANK (ENSGGOG00000012530) #17	NR2C2AP (ENSGGOG00000012536) #16	NCAN (ENSGGOG00000002977) #18	HAPLN4 (ENSGGOG00000002981) #19	TM6SF2 (ENSGGOG00000002983) #20	SUGP1 (ENSGGOG00000002984) #21	MAU2 (ENSGGOG00000002989) #22	GATAD2A (ENSGGOG00000005973) #23	TSSK6 (ENSGGOG00000042656) #24	NDUFA13 (ENSGGOG00000040690) #25	YJEFN3 (ENSGGOG00000005985) #26	CILP2 (ENSGGOG00000005993) #27	PBX4 (ENSGGOG00000006000) #28	LPAR2 (ENSGGOG00000006010) #29	GMIP (ENSGGOG00000006016) #30	ATP13A1 (ENSGGOG00000006026) #31	ZNF101 (ENSGGOG00000006033) ##32	ZNF14 (ENSGGOG00000022750) ##32	ENSGGOG00000022087	ENSGGOG00000043851	ZNF93 (ENSGGOG00000001955)	ZNF682 (ENSGGOG00000041772)
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00490000043385.u.a.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Human	MODERN SPECIES	10	DDX49 (ENSG00000105671) #8	HOMER3 (ENSG00000051128) #9	SUGP2 (ENSG00000064607) #10	ARMC6 (ENSG00000105676) #11	SLC25A42 (ENSG00000181035) #12	TMEM161A (ENSG00000064545) #13	MEF2B (ENSG00000213999) #14	BORCS8-MEF2B (ENSG00000064489)	BORCS8 (ENSG00000254901)	RFXANK (ENSG00000064490) #17	NR2C2AP (ENSG00000184162) #16	NCAN (ENSG00000130287) #18	HAPLN4 (ENSG00000187664) #19	TM6SF2 (ENSG00000213996) #20	SUGP1 (ENSG00000105705) #21	MAU2 (ENSG00000129933) #22	GATAD2A (ENSG00000167491) #23	TSSK6 (ENSG00000178093) #24	NDUFA13 (ENSG00000186010) #25	ENSG00000258674	YJEFN3 (ENSG00000250067) #26	CILP2 (ENSG00000160161) #27	PBX4 (ENSG00000105717) #28	LPAR2 (ENSG00000064547) #29	GMIP (ENSG00000089639) #30	ATP13A1 (ENSG00000105726) #31	ZNF101 (ENSG00000181896) ##32	ZNF14 (ENSG00000105708) ##32	ZNF506 (ENSG00000081665)	ZNF253 (ENSG00000256771)	ZNF93 (ENSG00000184635)
Pan	ANCESTRAL SPECIES	14	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00490000043385.u.a.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Chimpanzee	MODERN SPECIES	10	COPE (ENSPTRG00000010723) #7	DDX49 (ENSPTRG00000010725) #8	HOMER3 (ENSPTRG00000010726) #9	SUGP2 (ENSPTRG00000010727) #10	ARMC6 (ENSPTRG00000010728) #11	SLC25A42 (ENSPTRG00000010729) #12	TMEM161A (ENSPTRG00000010730) #13	MEF2B (ENSPTRG00000010731) #14	BORCS8 (ENSPTRG00000039907)	RFXANK (ENSPTRG00000010732) #17	NR2C2AP (ENSPTRG00000010733) #16	NCAN (ENSPTRG00000010734) #18	HAPLN4 (ENSPTRG00000033676) #19	TM6SF2 (ENSPTRG00000010736) #20	SUGP1 (ENSPTRG00000010737) #21	MAU2 (ENSPTRG00000010738) #22	GATAD2A (ENSPTRG00000010739) #23	ENSPTRG00000043712 #24	NDUFA13 (ENSPTRG00000010741) #25	YJEFN3 (ENSPTRG00000010742) #26	CILP2 (ENSPTRG00000010743) #27	PBX4 (ENSPTRG00000010744) #28	LPAR2 (ENSPTRG00000010745) #29	GMIP (ENSPTRG00000010746) #30	ATP13A1 (ENSPTRG00000010747) #31	ZNF101 (ENSPTRG00000045970) ##32	ZNF14 (ENSPTRG00000022814) ##32	ZNF506 (ENSPTRG00000010755)	ENSPTRG00000045322	ZNF253 (ENSPTRG00000029074)	ZNF93 (ENSPTRG00000042811)
Bonobo	MODERN SPECIES	10	COPE (ENSPPAG00000020767) #7	DDX49 (ENSPPAG00000035217) #8	HOMER3 (ENSPPAG00000037113) #9	SUGP2 (ENSPPAG00000043787) #10	ARMC6 (ENSPPAG00000040716) #11	SLC25A42 (ENSPPAG00000036060) #12	TMEM161A (ENSPPAG00000041901) #13	MEF2B (ENSPPAG00000029747) #14	BORCS8 (ENSPPAG00000033735)	RFXANK (ENSPPAG00000032045) #17	NR2C2AP (ENSPPAG00000008303) #16	NCAN (ENSPPAG00000003961) #18	HAPLN4 (ENSPPAG00000013291) #19	TM6SF2 (ENSPPAG00000043499) #20	SUGP1 (ENSPPAG00000037102) #21	MAU2 (ENSPPAG00000032359) #22	GATAD2A (ENSPPAG00000003218) #23	TSSK6 (ENSPPAG00000022354) #24	ENSPPAG00000016456 #25	YJEFN3 (ENSPPAG00000025286) #26	CILP2 (ENSPPAG00000035758) #27	PBX4 (ENSPPAG00000035891) #28	LPAR2 (ENSPPAG00000043772) #29	GMIP (ENSPPAG00000037482) #30	ATP13A1 (ENSPPAG00000042644) #31	ZNF101 (ENSPPAG00000028690) ##32	ZNF14 (ENSPPAG00000036864) ##32	ENSPPAG00000028827	ENSPPAG00000040622	ENSPPAG00000039166	ENSPPAG00000024536
Orangutan	MODERN SPECIES	10	COPE (ENSPPYG00000009753) #7	DDX49 (ENSPPYG00000009755) #8	HOMER3 (ENSPPYG00000035001) #9	SUGP2 (ENSPPYG00000009756) #10	ARMC6 (ENSPPYG00000009757) #11	SLC25A42 (ENSPPYG00000009758) #12	TMEM161A (ENSPPYG00000009759) #13	MEF2B (ENSPPYG00000009760) #14	BORCS8 (ENSPPYG00000039532)	RFXANK (ENSPPYG00000009761) #17	NR2C2AP (ENSPPYG00000009762) #16	NCAN (ENSPPYG00000009763) #18	HAPLN4 (ENSPPYG00000009764) #19	TM6SF2 (ENSPPYG00000009765) #20	SUGP1 (ENSPPYG00000009766) #21	MAU2 (ENSPPYG00000009767) #22	GATAD2A (ENSPPYG00000009769) #23	TSSK6 (ENSPPYG00000009770) #24	NDUFA13 (ENSPPYG00000036460) #25	YJEFN3 (ENSPPYG00000009772) #26	CILP2 (ENSPPYG00000009773) #27	PBX4 (ENSPPYG00000035724) #28	LPAR2 (ENSPPYG00000009774) #29	GMIP (ENSPPYG00000009775) #30	ATP13A1 (ENSPPYG00000009776) #31	ZNF101 (ENSPPYG00000009777) ##32	ZNF14 (ENSPPYG00000009778) ##32	ENSPPYG00000009781	ENSPPYG00000035360	ZNF682 (ENSPPYG00000040895)	ENSPPYG00000033266
Gibbon	MODERN SPECIES		DDX49 (ENSNLEG00000006136) #8	HOMER3 (ENSNLEG00000006154) #9	SUGP2 (ENSNLEG00000006162) #10	ARMC6 (ENSNLEG00000006169) #11	ENSNLEG00000006185	SLC25A42 (ENSNLEG00000027898) #12	ENSNLEG00000006186 #13	MEF2B (ENSNLEG00000006191) #14	ENSNLEG00000006195	RFXANK (ENSNLEG00000006200) #17	NR2C2AP (ENSNLEG00000006212) #16	NCAN (ENSNLEG00000006221) #18	HAPLN4 (ENSNLEG00000006225) #19	TM6SF2 (ENSNLEG00000006229) #20	SUGP1 (ENSNLEG00000006236) #21	MAU2 (ENSNLEG00000026855) #22	GATAD2A (ENSNLEG00000006277) #23	TSSK6 (ENSNLEG00000019216) #24	NDUFA13 (ENSNLEG00000006289) #25	YJEFN3 (ENSNLEG00000027046) #26	CILP2 (ENSNLEG00000006302) #27	ENSNLEG00000018526	ENSNLEG00000034918 #29	PBX4 (ENSNLEG00000006307) #28	ENSNLEG00000006312 #30	ATP13A1 (ENSNLEG00000006315) #31	ZNF101 (ENSNLEG00000006338) ##32	ZNF14 (ENSNLEG00000006339) ##32	ZNF506 (ENSNLEG00000006340)	ENSNLEG00000031307	ENSNLEG00000029893
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A	ENSGT00940000154251.A.a.b
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT01100000263495.E	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT01100000263495.E	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT01100000263495.E	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b
Olive baboon	MODERN SPECIES	12	COPE (ENSPANG00000002532) #7	DDX49 (ENSPANG00000003161) #8	HOMER3 (ENSPANG00000004386) #9	SUGP2 (ENSPANG00000004442) #10	ARMC6 (ENSPANG00000002531) #11	SLC25A42 (ENSPANG00000004441) #12	TMEM161A (ENSPANG00000023920) #13	MEF2B (ENSPANG00000023043) #14	BORCS8 (ENSPANG00000034354)	RFXANK (ENSPANG00000011633) #17	NR2C2AP (ENSPANG00000017708) #16	NCAN (ENSPANG00000017942) #18	HAPLN4 (ENSPANG00000004385) #19	TM6SF2 (ENSPANG00000017375) #20	SUGP1 (ENSPANG00000014398) #21	MAU2 (ENSPANG00000002876) #22	GATAD2A (ENSPANG00000011632) #23	TSSK6 (ENSPANG00000005919) #24	NDUFA13 (ENSPANG00000001628) #25	YJEFN3 (ENSPANG00000015322) #26	CILP2 (ENSPANG00000002530) #27	PBX4 (ENSPANG00000004463) #28	LPAR2 (ENSPANG00000020387) #29	GMIP (ENSPANG00000020293) #30	ATP13A1 (ENSPANG00000003160) #31	ZNF14 (ENSPANG00000006684) ##32	ZNF506 (ENSPANG00000007279)	ENSPANG00000046193	ZNF93 (ENSPANG00000015321)	ZNF682 (ENSPANG00000017939)	ENSPANG00000042028
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT01100000263495.E	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b
Sooty mangabey	MODERN SPECIES	347	COPE (ENSCATG00000038467) #7	DDX49 (ENSCATG00000032577) #8	HOMER3 (ENSCATG00000036483) #9	SUGP2 (ENSCATG00000029755) #10	ARMC6 (ENSCATG00000032065) #11	SLC25A42 (ENSCATG00000035155) #12	TMEM161A (ENSCATG00000036119) #13	MEF2B (ENSCATG00000031174) #14	BORCS8 (ENSCATG00000034039)	RFXANK (ENSCATG00000032949) #17	NR2C2AP (ENSCATG00000035313) #16	NCAN (ENSCATG00000033037) #18	HAPLN4 (ENSCATG00000033215) #19	TM6SF2 (ENSCATG00000038371) #20	SUGP1 (ENSCATG00000033059) #21	MAU2 (ENSCATG00000015302) #22	ENSCATG00000035199 #23	TSSK6 (ENSCATG00000003439) #24	NDUFA13 (ENSCATG00000038956) #25	YJEFN3 (ENSCATG00000037712) #26	CILP2 (ENSCATG00000040476) #27	PBX4 (ENSCATG00000035336) #28	LPAR2 (ENSCATG00000036510) #29	GMIP (ENSCATG00000030063) #30	ATP13A1 (ENSCATG00000034481) #31	ZNF101 (ENSCATG00000020203) ##32	ZNF14 (ENSCATG00000028572) ##32	ENSCATG00000037145	ZNF93 (ENSCATG00000042867)	ENSCATG00000039728 #23	ZNF682 (ENSCATG00000040224)
Drill	MODERN SPECIES	160	COPE (ENSMLEG00000042923) #7	DDX49 (ENSMLEG00000042550) #8	HOMER3 (ENSMLEG00000042234) #9	SUGP2 (ENSMLEG00000036719) #10	ARMC6 (ENSMLEG00000039585) #11	SLC25A42 (ENSMLEG00000038599) #12	TMEM161A (ENSMLEG00000041570) #13	MEF2B (ENSMLEG00000002780) #14	BORCS8 (ENSMLEG00000036175)	RFXANK (ENSMLEG00000007628) #17	NR2C2AP (ENSMLEG00000026610) #16	NCAN (ENSMLEG00000035960) #18	HAPLN4 (ENSMLEG00000043866) #19	TM6SF2 (ENSMLEG00000027647) #20	SUGP1 (ENSMLEG00000043364) #21	MAU2 (ENSMLEG00000035371) #22	GATAD2A (ENSMLEG00000040547) #23	TSSK6 (ENSMLEG00000010320) #24	NDUFA13 (ENSMLEG00000027225) #25	CILP2 (ENSMLEG00000038834) #27	PBX4 (ENSMLEG00000028081) #28	ENSMLEG00000038352	LPAR2 (ENSMLEG00000038948) #29	GMIP (ENSMLEG00000015104) #30	ATP13A1 (ENSMLEG00000038891) #31	ZNF101 (ENSMLEG00000038564) ##32	ENSMLEG00000034754	ZNF14 (ENSMLEG00000024882) ##32	ZNF506 (ENSMLEG00000035015)	ENSMLEG00000039824	ENSMLEG00000042742
Macaca	ANCESTRAL SPECIES	21	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00910000148304	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b
Macaca_a	ANCESTRAL SPECIES	1	ENSGT01030000234515.b	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000165497.F.b.b.a.a.a	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b
Rhesus	MODERN SPECIES	10	CERS1 (ENSMMUG00000059247)	COPE (ENSMMUG00000023291) #7	DDX49 (ENSMMUG00000023293) #8	HOMER3 (ENSMMUG00000023294) #9	SUGP2 (ENSMMUG00000019665) #10	ARMC6 (ENSMMUG00000019668) #11	SLC25A42 (ENSMMUG00000019669) #12	TMEM161A (ENSMMUG00000018367) #13	BORCS8 (ENSMMUG00000018368) #14	RFXANK (ENSMMUG00000010722) #17	NR2C2AP (ENSMMUG00000010723) #16	NCAN (ENSMMUG00000062498) #18	HAPLN4 (ENSMMUG00000008578) #19	TM6SF2 (ENSMMUG00000008576) #20	SUGP1 (ENSMMUG00000028834) #21	MAU2 (ENSMMUG00000008931) #22	GATAD2A (ENSMMUG00000003164) #23	TSSK6 (ENSMMUG00000049072) #24	YJEFN3 (ENSMMUG00000011351) #26	CILP2 (ENSMMUG00000011352) #27	PBX4 (ENSMMUG00000048108) #28	LPAR2 (ENSMMUG00000000654) #29	GMIP (ENSMMUG00000003036) #30	ATP13A1 (ENSMMUG00000043400) #31	ENSMMUG00000005860 ##32	ZNF14 (ENSMMUG00000021989) ##32	ENSMMUG00000062373	ZNF506 (ENSMMUG00000028833)	ENSMMUG00000061017	ZNF93 (ENSMMUG00000054055)	ENSMMUG00000063297
Crab-eating macaque	MODERN SPECIES	10	GDF1 (ENSMFAG00000064570)	COPE (ENSMFAG00000038870) #7	DDX49 (ENSMFAG00000044697) #8	HOMER3 (ENSMFAG00000031509) #9	SUGP2 (ENSMFAG00000040352) #10	ARMC6 (ENSMFAG00000000505) #11	TMEM161A (ENSMFAG00000043553) #13	SLC25A42 (ENSMFAG00000039473) #12	MEF2B (ENSMFAG00000032755) #14	RFXANK (ENSMFAG00000003753) #17	NR2C2AP (ENSMFAG00000042311) #16	NCAN (ENSMFAG00000043588) #18	HAPLN4 (ENSMFAG00000029816) #19	TM6SF2 (ENSMFAG00000006917) #20	SUGP1 (ENSMFAG00000031157) #21	MAU2 (ENSMFAG00000041829) #22	ENSMFAG00000002152 #23	YJEFN3 (ENSMFAG00000011503) #26	CILP2 (ENSMFAG00000064577) #27	PBX4 (ENSMFAG00000031948) #28	GMIP (ENSMFAG00000046087) #30	LPAR2 (ENSMFAG00000040780) #29	ATP13A1 (ENSMFAG00000045331) #31	ZNF101 (ENSMFAG00000042473) ##32	ZNF14 (ENSMFAG00000042563) ##32	ENSMFAG00000056328	ZNF506 (ENSMFAG00000039702)	ZNF93 (ENSMFAG00000035382)	ENSMFAG00000039432	ENSMFAG00000003085 #23	ENSMFAG00000037779
Pig-tailed macaque	MODERN SPECIES	76	DDX49 (ENSMNEG00000029654) #8	HOMER3 (ENSMNEG00000042042) #9	SUGP2 (ENSMNEG00000043062) #10	ARMC6 (ENSMNEG00000043051) #11	ENSMNEG00000030397	SLC25A42 (ENSMNEG00000043911) #12	TMEM161A (ENSMNEG00000027465) #13	MEF2B (ENSMNEG00000041102) #14	BORCS8 (ENSMNEG00000033374)	NR2C2AP (ENSMNEG00000037479) #16	RFXANK (ENSMNEG00000025165) #17	NCAN (ENSMNEG00000029669) #18	HAPLN4 (ENSMNEG00000034804) #19	TM6SF2 (ENSMNEG00000043588) #20	SUGP1 (ENSMNEG00000042010) #21	MAU2 (ENSMNEG00000034232) #22	ENSMNEG00000043233 #23	TSSK6 (ENSMNEG00000009045) #24	NDUFA13 (ENSMNEG00000039567) #25	YJEFN3 (ENSMNEG00000037092) #26	CILP2 (ENSMNEG00000034197) #27	ENSMNEG00000010618	PBX4 (ENSMNEG00000041601) #28	LPAR2 (ENSMNEG00000042518) #29	GMIP (ENSMNEG00000042233) #30	ATP13A1 (ENSMNEG00000029828) #31	ZNF101 (ENSMNEG00000034981) ##32	ENSMNEG00000042306	ZNF14 (ENSMNEG00000020785) ##32	ZNF506 (ENSMNEG00000037374)
Vervet Monkey	MODERN SPECIES	25	COPE (ENSCSAG00000005262) #7	DDX49 (ENSCSAG00000005251) #8	HOMER3 (ENSCSAG00000005233) #9	SUGP2 (ENSCSAG00000005226) #10	ARMC6 (ENSCSAG00000005225) #11	SLC25A42 (ENSCSAG00000005223) #12	TMEM161A (ENSCSAG00000005220) #13	MEF2B (ENSCSAG00000005217) #14	BORCS8 (ENSCSAG00000005214)	RFXANK (ENSCSAG00000005210) #17	NR2C2AP (ENSCSAG00000005205) #16	NCAN (ENSCSAG00000005190) #18	HAPLN4 (ENSCSAG00000005162) #19	TM6SF2 (ENSCSAG00000005157) #20	SUGP1 (ENSCSAG00000005148) #21	MAU2 (ENSCSAG00000005122) #22	GATAD2A (ENSCSAG00000005096) #23	TSSK6 (ENSCSAG00000018500) #24	NDUFA13 (ENSCSAG00000005084) #25	CILP2 (ENSCSAG00000005072) #27	PBX4 (ENSCSAG00000005070) #28	LPAR2 (ENSCSAG00000005063) #29	GMIP (ENSCSAG00000005061) #30	ATP13A1 (ENSCSAG00000005054) #31	ZNF101 (ENSCSAG00000005048) ##32	ZNF14 (ENSCSAG00000005044) ##32	ENSCSAG00000005039	ENSCSAG00000005037	ENSCSAG00000005034	ZNF682 (ENSCSAG00000005029)	ENSCSAG00000005026
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856.d	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.n.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a ##32	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000153236.a.a.b.b
Black snub-nosed monkey	MODERN SPECIES	1576	DDX49 (ENSRBIG00000030758) #8	HOMER3 (ENSRBIG00000038778) #9	SUGP2 (ENSRBIG00000020354) #10	ARMC6 (ENSRBIG00000038109) #11	ENSRBIG00000034545	SLC25A42 (ENSRBIG00000027977) #12	TMEM161A (ENSRBIG00000035635) #13	MEF2B (ENSRBIG00000037482) #14	BORCS8 (ENSRBIG00000044655)	NR2C2AP (ENSRBIG00000035480) #16	RFXANK (ENSRBIG00000027696) #17	NCAN (ENSRBIG00000028711) #18	HAPLN4 (ENSRBIG00000028696) #19	TM6SF2 (ENSRBIG00000035648) #20	SUGP1 (ENSRBIG00000035555) #21	MAU2 (ENSRBIG00000036077) #22	ENSRBIG00000029752 #23	TSSK6 (ENSRBIG00000020631) #24	NDUFA13 (ENSRBIG00000029310) #25	YJEFN3 (ENSRBIG00000044837) #26	CILP2 (ENSRBIG00000033619) #27	PBX4 (ENSRBIG00000043379) #28	LPAR2 (ENSRBIG00000028307) #29	GMIP (ENSRBIG00000034503) #30	ATP13A1 (ENSRBIG00000028613) #31	ZNF101 (ENSRBIG00000029302) ##32	ZNF14 (ENSRBIG00000042038) ##32	ENSRBIG00000030741
Golden snub-nosed monkey	MODERN SPECIES	2586	COPE (ENSRROG00000032396) #7	DDX49 (ENSRROG00000032460) #8	HOMER3 (ENSRROG00000038822) #9	SUGP2 (ENSRROG00000029264) #10	ARMC6 (ENSRROG00000034739) #11	SLC25A42 (ENSRROG00000040352) #12	TMEM161A (ENSRROG00000024629) #13	MEF2B (ENSRROG00000033740) #14	BORCS8 (ENSRROG00000045680)	RFXANK (ENSRROG00000028283) #17	NR2C2AP (ENSRROG00000033994) #16	NCAN (ENSRROG00000037872) #18	HAPLN4 (ENSRROG00000029649) #19	TM6SF2 (ENSRROG00000036675) #20	SUGP1 (ENSRROG00000030048) #21	MAU2 (ENSRROG00000032649) #22	ENSRROG00000031855 #23	TSSK6 (ENSRROG00000027240) #24	NDUFA13 (ENSRROG00000043641) #25	YJEFN3 (ENSRROG00000040358) #26	CILP2 (ENSRROG00000044306) #27	PBX4 (ENSRROG00000033089) #28	LPAR2 (ENSRROG00000044369) #29	GMIP (ENSRROG00000033996) #30	ATP13A1 (ENSRROG00000033237) #31	ZNF101 (ENSRROG00000034698) ##32	ENSRROG00000040378	ZNF14 (ENSRROG00000034519) ##32	ZNF506 (ENSRROG00000034835)
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081.g.a #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00390000001014.n	ENSGT00940000161356	ENSGT00390000010067.c	ENSGT00940000160728
Cebidae	ANCESTRAL SPECIES	8	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081.g.a #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000154251.A.a.b	ENSGT00390000001014.n	ENSGT00940000161356	ENSGT00390000010067.c
Marmoset	MODERN SPECIES	14	DDX49 (ENSCJAG00000042114) #8	HOMER3 (ENSCJAG00000080144) #9	SUGP2 (ENSCJAG00000019714) #10	ARMC6 (ENSCJAG00000019747) #11	SLC25A42 (ENSCJAG00000044017) #12	TMEM161A (ENSCJAG00000019759) #13	MEF2B (ENSCJAG00000019767) #14	BORCS8 (ENSCJAG00000046526)	RFXANK (ENSCJAG00000019775) #17	NR2C2AP (ENSCJAG00000019782) #16	NCAN (ENSCJAG00000008512) #18	ENSCJAG00000070942	HAPLN4 (ENSCJAG00000073329) #19	TM6SF2 (ENSCJAG00000039656) #20	SUGP1 (ENSCJAG00000005755) #21	MAU2 (ENSCJAG00000039088) #22	GATAD2A (ENSCJAG00000040704) #23	ENSCJAG00000043112 #25	YJEFN3 (ENSCJAG00000005654) #26	CILP2 (ENSCJAG00000005650) #27	ENSCJAG00000073644	ENSCJAG00000070214	ENSCJAG00000023241	LPAR2 (ENSCJAG00000005646) #29	GMIP (ENSCJAG00000005633) #30	ZNF101 (ENSCJAG00000005545) ##32	ZNF14 (ENSCJAG00000005527) ##32	ENSCJAG00000060061	ENSCJAG00000071921	ENSCJAG00000072189	ENSCJAG00000039521
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081.g.a #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a ##32	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32	ENSGT00940000154251.A.a.b
Bolivian squirrel monkey	MODERN SPECIES	199	COPE (ENSSBOG00000014113) #7	DDX49 (ENSSBOG00000035812) #8	HOMER3 (ENSSBOG00000030722) #9	SUGP2 (ENSSBOG00000020629) #10	ENSSBOG00000024227 #11	SLC25A42 (ENSSBOG00000024288) #12	TMEM161A (ENSSBOG00000031066) #13	MEF2B (ENSSBOG00000024550) #14	BORCS8 (ENSSBOG00000022945)	RFXANK (ENSSBOG00000022019) #17	NR2C2AP (ENSSBOG00000031337) #16	NCAN (ENSSBOG00000033005) #18	HAPLN4 (ENSSBOG00000028603) #19	TM6SF2 (ENSSBOG00000031897) #20	SUGP1 (ENSSBOG00000020160) #21	MAU2 (ENSSBOG00000034577) #22	GATAD2A (ENSSBOG00000029481) #23	TSSK6 (ENSSBOG00000018199) #24	NDUFA13 (ENSSBOG00000019126) #25	YJEFN3 (ENSSBOG00000021793) #26	CILP2 (ENSSBOG00000026211) #27	ENSSBOG00000031282 #28	LPAR2 (ENSSBOG00000029005) #29	GMIP (ENSSBOG00000036091) #30	ATP13A1 (ENSSBOG00000033381) #31	ZNF101 (ENSSBOG00000033857) ##32	ZNF14 (ENSSBOG00000029592) ##32	ENSSBOG00000024223
Capuchin	MODERN SPECIES	280	COPE (ENSCCAG00000036516) #7	DDX49 (ENSCCAG00000036092) #8	HOMER3 (ENSCCAG00000024819) #9	SUGP2 (ENSCCAG00000023178) #10	ARMC6 (ENSCCAG00000027993) #11	SLC25A42 (ENSCCAG00000028461) #12	ENSCCAG00000034387 #13	MEF2B (ENSCCAG00000025516) #14	BORCS8 (ENSCCAG00000026464)	RFXANK (ENSCCAG00000034756) #17	NR2C2AP (ENSCCAG00000034992) #16	NCAN (ENSCCAG00000029973) #18	HAPLN4 (ENSCCAG00000030280) #19	TM6SF2 (ENSCCAG00000030646) #20	SUGP1 (ENSCCAG00000024177) #21	MAU2 (ENSCCAG00000031923) #22	GATAD2A (ENSCCAG00000036212) #23	TSSK6 (ENSCCAG00000019676) #24	ENSCCAG00000027170 #25	YJEFN3 (ENSCCAG00000036770) #26	CILP2 (ENSCCAG00000025104) #27	PBX4 (ENSCCAG00000028260) #28	LPAR2 (ENSCCAG00000036944) #29	GMIP (ENSCCAG00000030811) #30	ATP13A1 (ENSCCAG00000033311) #31	ZNF101 (ENSCCAG00000032395) ##32	ZNF14 (ENSCCAG00000035187) ##32	ZNF682 (ENSCCAG00000000964)	ENSCCAG00000016414	ENSCCAG00000033064	ENSCCAG00000037566
Mas night monkey	MODERN SPECIES	1353	COPE (ENSANAG00000018604) #7	DDX49 (ENSANAG00000031415) #8	ENSANAG00000020793 #9	SUGP2 (ENSANAG00000027159) #10	ARMC6 (ENSANAG00000025554) #11	SLC25A42 (ENSANAG00000030310) #12	TMEM161A (ENSANAG00000034160) #13	MEF2B (ENSANAG00000020769) #14	BORCS8 (ENSANAG00000034161)	RFXANK (ENSANAG00000025466) #17	NR2C2AP (ENSANAG00000035166) #16	ENSANAG00000035988 #18	HAPLN4 (ENSANAG00000024057) #19	TM6SF2 (ENSANAG00000034245) #20	SUGP1 (ENSANAG00000028538) #21	MAU2 (ENSANAG00000026794) #22	GATAD2A (ENSANAG00000038065) #23	TSSK6 (ENSANAG00000020096) #24	NDUFA13 (ENSANAG00000033597) #25	YJEFN3 (ENSANAG00000026506) #26	CILP2 (ENSANAG00000024220) #27	PBX4 (ENSANAG00000032208) #28	ENSANAG00000038455	LPAR2 (ENSANAG00000036455) #29	GMIP (ENSANAG00000001734) #30	ATP13A1 (ENSANAG00000033092) #31	ENSANAG00000000491 ##32	ZNF14 (ENSANAG00000032489) ##32	ENSANAG00000002572	ENSANAG00000023146	ENSANAG00000024123
Tarsier	MODERN SPECIES	4863														TM6SF2 (ENSTSYG00000029039) #20	SUGP1 (ENSTSYG00000005329) #21	MAU2 (ENSTSYG00000005181) #22	GATAD2A (ENSTSYG00000000285) #23	TSSK6 (ENSTSYG00000027337) #24	NDUFA13 (ENSTSYG00000012695) #25	YJEFN3 (ENSTSYG00000036056) #26
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.l #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32
Bushbaby	MODERN SPECIES	220	COPE (ENSOGAG00000031639) #7	DDX49 (ENSOGAG00000008259) #8	HOMER3 (ENSOGAG00000008261) #9	SUGP2 (ENSOGAG00000024068) #10	ARMC6 (ENSOGAG00000007536) #11	SLC25A42 (ENSOGAG00000007251) #12	TMEM161A (ENSOGAG00000015720) #13	MEF2B (ENSOGAG00000001694) #14	BORCS8 (ENSOGAG00000028427)	RFXANK (ENSOGAG00000010950) #17	NR2C2AP (ENSOGAG00000033463) #16	NCAN (ENSOGAG00000010954) #18	HAPLN4 (ENSOGAG00000009972) #19	TM6SF2 (ENSOGAG00000028833) #20	ENSOGAG00000009975 #21	MAU2 (ENSOGAG00000009979) #22	GATAD2A (ENSOGAG00000007442) #23	TSSK6 (ENSOGAG00000027271) #24	NDUFA13 (ENSOGAG00000007445) #25	YJEFN3 (ENSOGAG00000033582) #26	CILP2 (ENSOGAG00000028615) #27	PBX4 (ENSOGAG00000007450) #28	LPAR2 (ENSOGAG00000034025) #29	GMIP (ENSOGAG00000002588) #30	ATP13A1 (ENSOGAG00000002592) #31	ENSOGAG00000003983	ZNF25 (ENSOGAG00000032242)	ENSOGAG00000034716	ZNF248 (ENSOGAG00000029260)	BMS1 (ENSOGAG00000006511)	RET (ENSOGAG00000011244)
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.l #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32
Lemuriformes_a	ANCESTRAL SPECIES	65	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a.l #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.a.a.a.b.d.a ##32
Greater bamboo lemur	MODERN SPECIES	392	COPE (ENSPSMG00000001405) #7	DDX49 (ENSPSMG00000001520) #8	HOMER3 (ENSPSMG00000001606) #9	SUGP2 (ENSPSMG00000001742) #10	ARMC6 (ENSPSMG00000001861) #11	SLC25A42 (ENSPSMG00000001893) #12	TMEM161A (ENSPSMG00000001938) #13	MEF2B (ENSPSMG00000001996) #14	BORCS8 (ENSPSMG00000002009)	RFXANK (ENSPSMG00000002047) #17	NR2C2AP (ENSPSMG00000002131) #16	NCAN (ENSPSMG00000002186) #18	HAPLN4 (ENSPSMG00000002199) #19	TM6SF2 (ENSPSMG00000002208) #20	SUGP1 (ENSPSMG00000002255) #21	MAU2 (ENSPSMG00000002309) #22	GATAD2A (ENSPSMG00000002335) #23	TSSK6 (ENSPSMG00000002343) #24	NDUFA13 (ENSPSMG00000002354) #25	YJEFN3 (ENSPSMG00000002364) #26	CILP2 (ENSPSMG00000002378) #27	ENSPSMG00000002390	PBX4 (ENSPSMG00000002398) #28	LPAR2 (ENSPSMG00000002408) #29	GMIP (ENSPSMG00000002524) #30
Coquerels sifaka	MODERN SPECIES	589	COPE (ENSPCOG00000015758) #7	DDX49 (ENSPCOG00000024973) #8	HOMER3 (ENSPCOG00000014798) #9	SUGP2 (ENSPCOG00000016042) #10	ARMC6 (ENSPCOG00000017481) #11	SLC25A42 (ENSPCOG00000026001) #12	TMEM161A (ENSPCOG00000012683) #13	MEF2B (ENSPCOG00000024251) #14	BORCS8 (ENSPCOG00000016887)	RFXANK (ENSPCOG00000019783) #17	NR2C2AP (ENSPCOG00000023079) #16	NCAN (ENSPCOG00000015066) #18	HAPLN4 (ENSPCOG00000023645) #19	TM6SF2 (ENSPCOG00000024818) #20	SUGP1 (ENSPCOG00000017524) #21	MAU2 (ENSPCOG00000020236) #22	GATAD2A (ENSPCOG00000019794) #23	TSSK6 (ENSPCOG00000012813) #24	NDUFA13 (ENSPCOG00000015544) #25	YJEFN3 (ENSPCOG00000028351) #26	CILP2 (ENSPCOG00000016451) #27	PBX4 (ENSPCOG00000016827) #28	LPAR2 (ENSPCOG00000020323) #29	GMIP (ENSPCOG00000026022) #30	ATP13A1 (ENSPCOG00000020533) #31	ZNF14 (ENSPCOG00000028861) ##32
Mouse lemur	MODERN SPECIES	16	KANK2 (ENSMICG00000004036)	ANGPTL8 (ENSMICG00000042533)	DOCK6 (ENSMICG00000004040)	TSPAN16 (ENSMICG00000042148)	RAB3D (ENSMICG00000031435)	TMEM205 (ENSMICG00000044601)	CCDC159 (ENSMICG00000004075)	PLPPR2 (ENSMICG00000036197)	SWSAP1 (ENSMICG00000005683)	EPOR (ENSMICG00000034457)	RGL3 (ENSMICG00000009876)	ODAD3 (ENSMICG00000009897)	PRKCSH (ENSMICG00000009913)	ELAVL3 (ENSMICG00000016528)	ENSMICG00000047505 #21	MAU2 (ENSMICG00000015603) #22	GATAD2A (ENSMICG00000015636) #23	TSSK6 (ENSMICG00000031087) #24	NDUFA13 (ENSMICG00000027711) #25	YJEFN3 (ENSMICG00000043804) #26	CILP2 (ENSMICG00000038618) #27	PBX4 (ENSMICG00000005939) #28	LPAR2 (ENSMICG00000047382) #29	GMIP (ENSMICG00000005944) #30	ATP13A1 (ENSMICG00000005954) #31	ECSIT (ENSMICG00000043164)	CNN1 (ENSMICG00000011674)	ELOF1 (ENSMICG00000011684)	ACP5 (ENSMICG00000007032)	ENSMICG00000038248 ##32	ENSMICG00000041761 ##32
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000162084	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00950000183216.d.a.a.b.a.a.a.b.b	ENSGT00950000183069.b	ENSGT00940000163783	ENSGT00940000162241
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163783	ENSGT00940000162241	ENSGT00940000162532	ENSGT00940000163146	ENSGT00940000154619.g.b.a.a	ENSGT00940000163044
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719.g #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000162241	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##32	ENSGT01030000234638.b.a.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719.g #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00390000018299.eb.a	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000162241	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##32
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719.g #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00390000018299.eb.a	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000162241	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##32
Beluga whale	MODERN SPECIES	27	COPE (ENSDLEG00000006169) #7	DDX49 (ENSDLEG00000006176) #8	HOMER3 (ENSDLEG00000006185) #9	SUGP2 (ENSDLEG00000006190) #10	ARMC6 (ENSDLEG00000006199) #11	SLC25A42 (ENSDLEG00000006206) #12	TMEM161A (ENSDLEG00000006213) #13	MEF2B (ENSDLEG00000006219) #14	ENSDLEG00000006226	RFXANK (ENSDLEG00000006230) #17	ENSDLEG00000006238 #16	NCAN (ENSDLEG00000006241) #18	HAPLN4 (ENSDLEG00000006247) #19	TM6SF2 (ENSDLEG00000009148) #20	SUGP1 (ENSDLEG00000009158) #21	MAU2 (ENSDLEG00000009190) #22	GATAD2A (ENSDLEG00000009307) #23	TSSK6 (ENSDLEG00000009362) #24	ENSDLEG00000009372 #25	YJEFN3 (ENSDLEG00000009396) #26	CILP2 (ENSDLEG00000009413) #27	ENSDLEG00000009459	ENSDLEG00000009478 #28	LPAR2 (ENSDLEG00000009491) #29	GMIP (ENSDLEG00000009515) #30	ATP13A1 (ENSDLEG00000009604) #31	ENSDLEG00000009736	ENSDLEG00000009743 ##32	ENSDLEG00000009767	ZNF317 (ENSDLEG00000009793)	ENSDLEG00000009820
Narwhal	MODERN SPECIES	298	COPE (ENSMMNG00015007007) #7	DDX49 (ENSMMNG00015006955) #8	HOMER3 (ENSMMNG00015006915) #9	SUGP2 (ENSMMNG00015006879) #10	ARMC6 (ENSMMNG00015006856) #11	SLC25A42 (ENSMMNG00015006831) #12	TMEM161A (ENSMMNG00015006783) #13	MEF2B (ENSMMNG00015006749) #14	BORCS8 (ENSMMNG00015006726)	RFXANK (ENSMMNG00015006700) #17	ENSMMNG00015006667 #16	NCAN (ENSMMNG00015006441) #18	HAPLN4 (ENSMMNG00015006325) #19	TM6SF2 (ENSMMNG00015006300) #20	SUGP1 (ENSMMNG00015006270) #21	MAU2 (ENSMMNG00015006228) #22	GATAD2A (ENSMMNG00015006177) #23	TSSK6 (ENSMMNG00015006158) #24	ENSMMNG00015006145 #25	YJEFN3 (ENSMMNG00015006128) #26	CILP2 (ENSMMNG00015006092) #27	ENSMMNG00015006078	ENSMMNG00015005954 #28	LPAR2 (ENSMMNG00015005899) #29	GMIP (ENSMMNG00015005835) #30	ATP13A1 (ENSMMNG00015005783) #31	IFT20 (ENSMMNG00015005765)	ENSMMNG00015005751	ENSMMNG00015005730 ##32	ZNF317 (ENSMMNG00015005671)	ENSMMNG00015005635
Vaquita	MODERN SPECIES	14	CERS1 (ENSPSNG00000002156)	COPE (ENSPSNG00000002124) #7	DDX49 (ENSPSNG00000002062) #8	HOMER3 (ENSPSNG00000002016) #9	SUGP2 (ENSPSNG00000001966) #10	ARMC6 (ENSPSNG00000001939) #11	SLC25A42 (ENSPSNG00000001921) #12	TMEM161A (ENSPSNG00000001898) #13	MEF2B (ENSPSNG00000001853) #14	RFXANK (ENSPSNG00000001779) #17	NR2C2AP (ENSPSNG00000001752) #16	NCAN (ENSPSNG00000001532) #18	HAPLN4 (ENSPSNG00000001367) #19	TM6SF2 (ENSPSNG00000001343) #20	SUGP1 (ENSPSNG00000001311) #21	MAU2 (ENSPSNG00000001203) #22	GATAD2A (ENSPSNG00000001112) #23	TSSK6 (ENSPSNG00000001081) #24	YJEFN3 (ENSPSNG00000001047) #26	CILP2 (ENSPSNG00000000993) #27	ENSPSNG00000000965	ENSPSNG00000000937 #28	LPAR2 (ENSPSNG00000000922) #29	GMIP (ENSPSNG00000000833) #30	ATP13A1 (ENSPSNG00000000739) #31	ENSPSNG00000000709	ENSPSNG00000000694	ENSPSNG00000000682 ##32	ENSPSNG00000000667 ##32	ZNF317 (ENSPSNG00000000646)	ENSPSNG00000000628
Dolphin	MODERN SPECIES	2460													HAPLN4 (ENSTTRG00000009848) #19	TM6SF2 (ENSTTRG00000009863) #20	SUGP1 (ENSTTRG00000009868) #21	MAU2 (ENSTTRG00000009871) #22	GATAD2A (ENSTTRG00000009875) #23	TSSK6 (ENSTTRG00000009879) #24	NDUFA13 (ENSTTRG00000009880) #25	YJEFN3 (ENSTTRG00000009882) #26	CILP2 (ENSTTRG00000009884) #27	PBX4 (ENSTTRG00000009886) #28	LPAR2 (ENSTTRG00000009889) #29	GMIP (ENSTTRG00000009891) #30	ATP13A1 (ENSTTRG00000009893) #31
Sperm whale	MODERN SPECIES	1143																MAU2 (ENSPCTG00005018277) #22
Blue whale	MODERN SPECIES	14	COPE (ENSBMSG00010004064) #7	DDX49 (ENSBMSG00010004039) #8	HOMER3 (ENSBMSG00010003958) #9	SUGP2 (ENSBMSG00010003931) #10	ARMC6 (ENSBMSG00010003914) #11	SLC25A42 (ENSBMSG00010003900) #12	TMEM161A (ENSBMSG00010003877) #13	MEF2B (ENSBMSG00010003849) #14	ENSBMSG00010002783	RFXANK (ENSBMSG00010002771) #17	NR2C2AP (ENSBMSG00010002762) #16	NCAN (ENSBMSG00010002745) #18	HAPLN4 (ENSBMSG00010002737) #19	TM6SF2 (ENSBMSG00010002725) #20	SUGP1 (ENSBMSG00010002719) #21	MAU2 (ENSBMSG00010002666) #22	GATAD2A (ENSBMSG00010002620) #23	TSSK6 (ENSBMSG00010002611) #24	YJEFN3 (ENSBMSG00010002588) #26	CILP2 (ENSBMSG00010002559) #27	ENSBMSG00010002498 #28	ENSBMSG00010002474	LPAR2 (ENSBMSG00010002465) #29	GMIP (ENSBMSG00010002416) #30	ATP13A1 (ENSBMSG00010002333) #31	ENSBMSG00010002309	OR7C1 (ENSBMSG00010002299)	ENSBMSG00010002290	ENSBMSG00010002274	ENSBMSG00010002262	ZNF317 (ENSBMSG00010002252)
Pecora	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Percora_a	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Bovidae	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Caprinae	ANCESTRAL SPECIES	32	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Rambouillet Sheep	MODERN SPECIES	21	UPF1 (ENSOARG00020003352)	CERS1 (ENSOARG00020021615)	DDX49 (ENSOARG00020021548) #8	ENSOARG00020021129 #9	SUGP2 (ENSOARG00020021040) #10	ARMC6 (ENSOARG00020020947) #11	SLC25A42 (ENSOARG00020020909) #12	TMEM161A (ENSOARG00020020857) #13	MEF2B (ENSOARG00020020398) #14	BORCS8 (ENSOARG00020020354)	RFXANK (ENSOARG00020020308) #17	NR2C2AP (ENSOARG00020020240) #16	HAPLN4 (ENSOARG00020020166) #19	TM6SF2 (ENSOARG00020020089) #20	SUGP1 (ENSOARG00020019993) #21	MAU2 (ENSOARG00020019838) #22	GATAD2A (ENSOARG00020019767) #23	TSSK6 (ENSOARG00020019749) #24	NDUFA13 (ENSOARG00020019709) #25	YJEFN3 (ENSOARG00020019633) #26	CILP2 (ENSOARG00020019527) #27	LPAR2 (ENSOARG00020019376) #29	GMIP (ENSOARG00020019185) #30	ATP13A1 (ENSOARG00020019002) #31	ENSOARG00020018960	ZNF354B (ENSOARG00020018905)	SNAP47 (ENSOARG00020018819)	PRSS38 (ENSOARG00020018766)	WNT9A (ENSOARG00020018708)	ENSOARG00020018666	WNT3A (ENSOARG00020018613)
Goat	MODERN SPECIES	26	COPE (ENSCHIG00000019197) #7	DDX49 (ENSCHIG00000019910) #8	HOMER3 (ENSCHIG00000013425) #9	SUGP2 (ENSCHIG00000000571) #10	ARMC6 (ENSCHIG00000022745) #11	SLC25A42 (ENSCHIG00000017224) #12	TMEM161A (ENSCHIG00000015703) #13	MEF2B (ENSCHIG00000009022) #14	BORCS8 (ENSCHIG00000023514)	RFXANK (ENSCHIG00000009697) #17	NR2C2AP (ENSCHIG00000026754) #16	NCAN (ENSCHIG00000023523) #18	HAPLN4 (ENSCHIG00000017398) #19	TM6SF2 (ENSCHIG00000009497) #20	SUGP1 (ENSCHIG00000024169) #21	MAU2 (ENSCHIG00000018574) #22	GATAD2A (ENSCHIG00000022449) #23	TSSK6 (ENSCHIG00000012857) #24	NDUFA13 (ENSCHIG00000005106) #25	YJEFN3 (ENSCHIG00000022695) #26	CILP2 (ENSCHIG00000016599) #27	PBX4 (ENSCHIG00000020490) #28	LPAR2 (ENSCHIG00000026267) #29	GMIP (ENSCHIG00000006935) #30	ATP13A1 (ENSCHIG00000027146) #31	ENSCHIG00000027175	ZNF354B (ENSCHIG00000024384)	JMJD4 (ENSCHIG00000001908)	SNAP47 (ENSCHIG00000025042)	ENSCHIG00000004906	WNT9A (ENSCHIG00000009523)
Bovinae	ANCESTRAL SPECIES	34	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Bos	ANCESTRAL SPECIES	34	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Bos_a	ANCESTRAL SPECIES	29	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618	ENSGT00940000160510	ENSGT00950000183080.a.b.a.b.b
Domestic yak	MODERN SPECIES	27	DDX49 (ENSBGRG00000001122) #8	HOMER3 (ENSBGRG00000001163) #9	ENSBGRG00000001213 #9	SUGP2 (ENSBGRG00000001227) #10	ARMC6 (ENSBGRG00000001271) #11	SLC25A42 (ENSBGRG00000001293) #12	TMEM161A (ENSBGRG00000001322) #13	MEF2B (ENSBGRG00000001435) #14	ENSBGRG00000001503	RFXANK (ENSBGRG00000001549) #17	NR2C2AP (ENSBGRG00000001646) #16	NCAN (ENSBGRG00000001688) #18	HAPLN4 (ENSBGRG00000001768) #19	TM6SF2 (ENSBGRG00000001786) #20	SUGP1 (ENSBGRG00000001817) #21	MAU2 (ENSBGRG00000001879) #22	ENSBGRG00000001911	GATAD2A (ENSBGRG00000001936) #23	TSSK6 (ENSBGRG00000001976) #24	YJEFN3 (ENSBGRG00000002015) #26	CILP2 (ENSBGRG00000002130) #27	PBX4 (ENSBGRG00000002159) #28	LPAR2 (ENSBGRG00000002227) #29	GMIP (ENSBGRG00000002278) #30	ATP13A1 (ENSBGRG00000002465) #31	ENSBGRG00000002896	ZNF354B (ENSBGRG00000002905)	JMJD4 (ENSBGRG00000002925)	SNAP47 (ENSBGRG00000002943)	PRSS38 (ENSBGRG00000002987)	WNT9A (ENSBGRG00000003023)
Wild yak	MODERN SPECIES	2661																MAU2 (ENSBMUG00000019084) #22	GATAD2A (ENSBMUG00000019332) #23	TSSK6 (ENSBMUG00000019390) #24	YJEFN3 (ENSBMUG00000019400) #26	CILP2 (ENSBMUG00000019415) #27	PBX4 (ENSBMUG00000019515) #28	LPAR2 (ENSBMUG00000019563) #29	GMIP (ENSBMUG00000019714) #30	ATP13A1 (ENSBMUG00000020253) #31
Bos_b	ANCESTRAL SPECIES	36	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00730000111029.e.a	ENSGT00940000162570	ENSGT00940000159380	ENSGT00950000182843.b	ENSGT00940000154494.a.b	ENSGT00940000159618
Hybrid Bos Indicus	MODERN SPECIES	26	COPE (ENSBIXG00005012672) #7	DDX49 (ENSBIXG00005012358) #8	HOMER3 (ENSBIXG00005000373) #9	SUGP2 (ENSBIXG00005001278) #10	ARMC6 (ENSBIXG00005012220) #11	SLC25A42 (ENSBIXG00005012191) #12	TMEM161A (ENSBIXG00005007436) #13	MEF2B (ENSBIXG00005012139) #14	BORCS8 (ENSBIXG00005012065)	RFXANK (ENSBIXG00005012032) #17	NR2C2AP (ENSBIXG00005011976) #16	NCAN (ENSBIXG00005011939) #18	HAPLN4 (ENSBIXG00005006424) #19	TM6SF2 (ENSBIXG00005011902) #20	SUGP1 (ENSBIXG00005011882) #21	MAU2 (ENSBIXG00005011825) #22	GATAD2A (ENSBIXG00005011721) #23	CILP2 (ENSBIXG00005011569) #27	PBX4 (ENSBIXG00005011533) #28	LPAR2 (ENSBIXG00005011498) #29	GMIP (ENSBIXG00005011455) #30	ATP13A1 (ENSBIXG00005011383) #31	ENSBIXG00005011324	ZNF354B (ENSBIXG00005011307)	ENSBIXG00005000504	JMJD4 (ENSBIXG00005005916)	SNAP47 (ENSBIXG00005011285)	ENSBIXG00005011259	ENSBIXG00005001061	ENSBIXG00005011249	PRSS38 (ENSBIXG00005011238)
Cow	MODERN SPECIES	26	COPE (ENSBTAG00000000810) #7	DDX49 (ENSBTAG00000000811) #8	HOMER3 (ENSBTAG00000000813) #9	SUGP2 (ENSBTAG00000013288) #10	ARMC6 (ENSBTAG00000013291) #11	SLC25A42 (ENSBTAG00000001816) #12	TMEM161A (ENSBTAG00000001817) #13	MEF2B (ENSBTAG00000001818) #14	BORCS8 (ENSBTAG00000025817)	RFXANK (ENSBTAG00000001762) #17	NR2C2AP (ENSBTAG00000001763) #16	NCAN (ENSBTAG00000001764) #18	HAPLN4 (ENSBTAG00000001765) #19	TM6SF2 (ENSBTAG00000016042) #20	SUGP1 (ENSBTAG00000006116) #21	MAU2 (ENSBTAG00000006124) #22	GATAD2A (ENSBTAG00000003034) #23	TSSK6 (ENSBTAG00000006649) #24	NDUFA13 (ENSBTAG00000007812) #25	YJEFN3 (ENSBTAG00000014968) #26	CILP2 (ENSBTAG00000014969) #27	PBX4 (ENSBTAG00000009975) #28	LPAR2 (ENSBTAG00000004652) #29	GMIP (ENSBTAG00000015144) #30	ATP13A1 (ENSBTAG00000007128) #31	ENSBTAG00000052161	ZNF354B (ENSBTAG00000017123)	JMJD4 (ENSBTAG00000004191)	SNAP47 (ENSBTAG00000004188)	PRSS38 (ENSBTAG00000013977)	WNT9A (ENSBTAG00000020267)
American bison	MODERN SPECIES	3165	COPE (ENSBBBG00000015595) #7	DDX49 (ENSBBBG00000015616) #8	ENSBBBG00000003467 #9	ENSBBBG00000003456 #9	SUGP2 (ENSBBBG00000003426) #10	ARMC6 (ENSBBBG00000015629) #11	TMEM161A (ENSBBBG00000007455) #13	MEF2B (ENSBBBG00000007138) #14	ENSBBBG00000015701	RFXANK (ENSBBBG00000015745) #17	NR2C2AP (ENSBBBG00000003931) #16	NCAN (ENSBBBG00000003940) #18	HAPLN4 (ENSBBBG00000015855) #19	TM6SF2 (ENSBBBG00000015869) #20	SUGP1 (ENSBBBG00000015892) #21	MAU2 (ENSBBBG00000003961) #22	GATAD2A (ENSBBBG00000015939) #23	TSSK6 (ENSBBBG00000015942) #24	NDUFA13 (ENSBBBG00000015950) #25	YJEFN3 (ENSBBBG00000015957) #26	CILP2 (ENSBBBG00000015975) #27	PBX4 (ENSBBBG00000015984) #28	LPAR2 (ENSBBBG00000015996) #29	GMIP (ENSBBBG00000016022) #30	ATP13A1 (ENSBBBG00000003990) #31	ENSBBBG00000016056	ZNF354B (ENSBBBG00000016063)	JMJD4 (ENSBBBG00000016083)	SNAP47 (ENSBBBG00000007139)	PRSS38 (ENSBBBG00000016108)	WNT9A (ENSBBBG00000016116)
Siberian musk deer	MODERN SPECIES	1231	COPE (ENSMMSG00000022538) #7	DDX49 (ENSMMSG00000022565) #8	HOMER3 (ENSMMSG00000022598) #9	SUGP2 (ENSMMSG00000022643) #10	ARMC6 (ENSMMSG00000022659) #11	SLC25A42 (ENSMMSG00000022673) #12	TMEM161A (ENSMMSG00000016113) #13	MEF2B (ENSMMSG00000016211) #14	BORCS8 (ENSMMSG00000016823)	RFXANK (ENSMMSG00000016859) #17	NR2C2AP (ENSMMSG00000016963) #16	NCAN (ENSMMSG00000017015) #18	HAPLN4 (ENSMMSG00000017463) #19	TM6SF2 (ENSMMSG00000017487) #20	SUGP1 (ENSMMSG00000017541) #21	MAU2 (ENSMMSG00000017598) #22	GATAD2A (ENSMMSG00000017683) #23	ENSMMSG00000017748	TSSK6 (ENSMMSG00000017779) #24	ENSMMSG00000017802 #25	YJEFN3 (ENSMMSG00000017864) #26	CILP2 (ENSMMSG00000017925) #27	PBX4 (ENSMMSG00000017955) #28	LPAR2 (ENSMMSG00000018021) #29	GMIP (ENSMMSG00000018067) #30	ATP13A1 (ENSMMSG00000018140) #31
Yarkand deer	MODERN SPECIES	32	CERS1 (ENSCHYG00000015529)	DDX49 (ENSCHYG00000015448) #8	ENSCHYG00000014561 #9	SUGP2 (ENSCHYG00000014360) #10	ARMC6 (ENSCHYG00000014214) #11	SLC25A42 (ENSCHYG00000014137) #12	TMEM161A (ENSCHYG00000013806) #13	MEF2B (ENSCHYG00000013347) #14	BORCS8 (ENSCHYG00000013210)	RFXANK (ENSCHYG00000013090) #17	NR2C2AP (ENSCHYG00000013015) #16	NCAN (ENSCHYG00000012951) #18	HAPLN4 (ENSCHYG00000012901) #19	TM6SF2 (ENSCHYG00000012851) #20	SUGP1 (ENSCHYG00000012677) #21	MAU2 (ENSCHYG00000012428) #22	GATAD2A (ENSCHYG00000012277) #23	TSSK6 (ENSCHYG00000012255) #24	NDUFA13 (ENSCHYG00000012188) #25	YJEFN3 (ENSCHYG00000012151) #26	CILP2 (ENSCHYG00000012104) #27	PBX4 (ENSCHYG00000011654) #28	LPAR2 (ENSCHYG00000011542) #29	GMIP (ENSCHYG00000011272) #30	ATP13A1 (ENSCHYG00000010816) #31	ENSCHYG00000010766	ZNF354B (ENSCHYG00000010723)	ENSCHYG00000010707	JMJD4 (ENSCHYG00000010663)	SNAP47 (ENSCHYG00000010619)	PRSS38 (ENSCHYG00000010560)
Camelidae	ANCESTRAL SPECIES	64	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Arabian camel	MODERN SPECIES	14	COPE (ENSCDRG00005013441) #7	DDX49 (ENSCDRG00005013373) #8	HOMER3 (ENSCDRG00005013258) #9	SUGP2 (ENSCDRG00005013031) #10	ARMC6 (ENSCDRG00005012979) #11	SLC25A42 (ENSCDRG00005012927) #12	TMEM161A (ENSCDRG00005012779) #13	MEF2B (ENSCDRG00005012755) #14	ENSCDRG00005012691	RFXANK (ENSCDRG00005012616) #17	NR2C2AP (ENSCDRG00005012299) #16	NCAN (ENSCDRG00005012212) #18	HAPLN4 (ENSCDRG00005012163) #19	TM6SF2 (ENSCDRG00005012037) #20	SUGP1 (ENSCDRG00005011946) #21	MAU2 (ENSCDRG00005011821) #22	GATAD2A (ENSCDRG00005011647) #23	TSSK6 (ENSCDRG00005011623) #24	YJEFN3 (ENSCDRG00005011508) #26	CILP2 (ENSCDRG00005011464) #27	PBX4 (ENSCDRG00005011358) #28	LPAR2 (ENSCDRG00005011318) #29	GMIP (ENSCDRG00005011233) #30	ATP13A1 (ENSCDRG00005011036) #31	ATP10B (ENSCDRG00005010580)	ENSCDRG00005010558	GABRB2 (ENSCDRG00005010424)	GABRA6 (ENSCDRG00005010202)	GABRA1 (ENSCDRG00005010066)	GABRG2 (ENSCDRG00005009620)	CCNG1 (ENSCDRG00005009416)
Suina	ANCESTRAL SPECIES	39	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643.a #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00960000186612.A.m.a	ENSGT00960000186612.A.m.b	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b
Pig	MODERN SPECIES	10	HOMER3 (ENSSSCG00000013919) #9	SUGP2 (ENSSSCG00000025839) #10	ARMC6 (ENSSSCG00000049430) #11	ENSSSCG00000044637	SLC25A42 (ENSSSCG00000013927) #12	TMEM161A (ENSSSCG00000033168) #13	MEF2B (ENSSSCG00000030351) #14	BORCS8 (ENSSSCG00000044084)	RFXANK (ENSSSCG00000036310) #17	NR2C2AP (ENSSSCG00000023658) #16	NCAN (ENSSSCG00000032131) #18	HAPLN4 (ENSSSCG00000034887) #19	TM6SF2 (ENSSSCG00000059192) #20	ENSSSCG00000048260	SUGP1 (ENSSSCG00000036970) #21	MAU2 (ENSSSCG00000021664) #22	GATAD2A (ENSSSCG00000013938) #23	TSSK6 (ENSSSCG00000013937) #24	NDUFA13 (ENSSSCG00000056961) #25	YJEFN3 (ENSSSCG00000013935) #26	CILP2 (ENSSSCG00000013934) #27	PBX4 (ENSSSCG00000013933) #28	LPAR2 (ENSSSCG00000013932) #29	GMIP (ENSSSCG00000013931) #30	ATP13A1 (ENSSSCG00000013930) #31	ENSSSCG00000061333	ENSSSCG00000038707	ENSSSCG00000043984	ENSSSCG00000033438	MGAT1 (ENSSSCG00000014538)	ZFP62 (ENSSSCG00000014539)
Chacoan peccary	MODERN SPECIES	769	COPE (ENSCWAG00000019578) #7	DDX49 (ENSCWAG00000019644) #8	HOMER3 (ENSCWAG00000019671) #9	SUGP2 (ENSCWAG00000019735) #10	ARMC6 (ENSCWAG00000019757) #11	SLC25A42 (ENSCWAG00000019779) #12	TMEM161A (ENSCWAG00000019820) #13	MEF2B (ENSCWAG00000019951) #14	BORCS8 (ENSCWAG00000019997)	RFXANK (ENSCWAG00000020046) #17	NR2C2AP (ENSCWAG00000007805) #16	NCAN (ENSCWAG00000007920) #18	HAPLN4 (ENSCWAG00000008277) #19	TM6SF2 (ENSCWAG00000008344) #20	SUGP1 (ENSCWAG00000008452) #21	MAU2 (ENSCWAG00000008506) #22	GATAD2A (ENSCWAG00000008702) #23	TSSK6 (ENSCWAG00000008796) #24	NDUFA13 (ENSCWAG00000008819) #25	YJEFN3 (ENSCWAG00000008846) #26	CILP2 (ENSCWAG00000008907) #27	PBX4 (ENSCWAG00000008974) #28	LPAR2 (ENSCWAG00000009001) #29	GMIP (ENSCWAG00000009054) #30	ATP13A1 (ENSCWAG00000009122) #31	ENSCWAG00000009299	ENSCWAG00000009337	MGAT1 (ENSCWAG00000009379)	ZFP62 (ENSCWAG00000009392)	BTNL9 (ENSCWAG00000009419)	ENSCWAG00000009574
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690	ENSGT00940000155721
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690	ENSGT00940000155721
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690	ENSGT00950000185538
American black bear	MODERN SPECIES							SLC25A42 (ENSUAMG00000000001) #12	TMEM161A (ENSUAMG00000000002) #13	MEF2B (ENSUAMG00000000003) #14	BORCS8 (ENSUAMG00000000004)	RFXANK (ENSUAMG00000000005) #17	NR2C2AP (ENSUAMG00000000006) #16	NCAN (ENSUAMG00000000007) #18	HAPLN4 (ENSUAMG00000000008) #19	TM6SF2 (ENSUAMG00000000009) #20	SUGP1 (ENSUAMG00000000010) #21	MAU2 (ENSUAMG00000000016) #22	ENSUAMG00000000653 #21	GATAD2A (ENSUAMG00000000666) #23	TSSK6 (ENSUAMG00000000680) #24	NDUFA13 (ENSUAMG00000000686) #25	YJEFN3 (ENSUAMG00000000690) #26	CILP2 (ENSUAMG00000000697) #27	PBX4 (ENSUAMG00000000763) #28	LPAR2 (ENSUAMG00000001027) #29	ATP13A1 (ENSUAMG00000001148) #31	ZNF502 (ENSUAMG00000001904)	ZNF501 (ENSUAMG00000001908)	KIAA1143 (ENSUAMG00000001910)	KIF15 (ENSUAMG00000001916)	TMEM42 (ENSUAMG00000001960)	ENSUAMG00000001965
Polar bear	MODERN SPECIES	255	UPF1 (ENSUMAG00000006652)	COPE (ENSUMAG00000006505) #7	DDX49 (ENSUMAG00000006489) #8	HOMER3 (ENSUMAG00000006477) #9	SUGP2 (ENSUMAG00000006467) #10	ARMC6 (ENSUMAG00000006462) #11	SLC25A42 (ENSUMAG00000006458) #12	TMEM161A (ENSUMAG00000006455) #13	MEF2B (ENSUMAG00000006437) #14	BORCS8 (ENSUMAG00000006425)	RFXANK (ENSUMAG00000006419) #17	NR2C2AP (ENSUMAG00000006411) #16	NCAN (ENSUMAG00000006378) #18	TM6SF2 (ENSUMAG00000006368) #20	SUGP1 (ENSUMAG00000006358) #21	MAU2 (ENSUMAG00000006229) #22	GATAD2A (ENSUMAG00000006192) #23	TSSK6 (ENSUMAG00000006185) #24	NDUFA13 (ENSUMAG00000006183) #25	ENSUMAG00000006179 #26	PBX4 (ENSUMAG00000006125) #28	LPAR2 (ENSUMAG00000006117) #29	GMIP (ENSUMAG00000006087) #30	ATP13A1 (ENSUMAG00000005989) #31	ZNF502 (ENSUMAG00000005965)	ZNF501 (ENSUMAG00000005963)	KIAA1143 (ENSUMAG00000005959)	KIF15 (ENSUMAG00000005764)	TMEM42 (ENSUMAG00000005738)	ENSUMAG00000005734	ZDHHC3 (ENSUMAG00000005730)
Giant Panda	MODERN SPECIES	14	COPE (ENSAMEG00000011524) #7	DDX49 (ENSAMEG00000011566) #8	HOMER3 (ENSAMEG00000011595) #9	SUGP2 (ENSAMEG00000011613) #10	ARMC6 (ENSAMEG00000011621) #11	SLC25A42 (ENSAMEG00000027218) #12	TMEM161A (ENSAMEG00000011655) #13	MEF2B (ENSAMEG00000011682) #14	BORCS8 (ENSAMEG00000011698)	RFXANK (ENSAMEG00000011703) #17	NR2C2AP (ENSAMEG00000011727) #16	NCAN (ENSAMEG00000011734) #18	HAPLN4 (ENSAMEG00000027731) #19	TM6SF2 (ENSAMEG00000011811) #20	SUGP1 (ENSAMEG00000011838) #21	MAU2 (ENSAMEG00000011868) #22	GATAD2A (ENSAMEG00000011882) #23	TSSK6 (ENSAMEG00000019351) #24	NDUFA13 (ENSAMEG00000011893) #25	YJEFN3 (ENSAMEG00000030667) #26	CILP2 (ENSAMEG00000011906) #27	PBX4 (ENSAMEG00000011909) #28	LPAR2 (ENSAMEG00000024299) #29	GMIP (ENSAMEG00000011931) #30	ENSAMEG00000011962 #31	ENSAMEG00000012026	ENSAMEG00000019371	KIAA1143 (ENSAMEG00000012027)	KIF15 (ENSAMEG00000012038)	TMEM42 (ENSAMEG00000012098)	ZDHHC3 (ENSAMEG00000028275)
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00940000153104.e.a.a.b	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690	ENSGT00940000155721
American mink	MODERN SPECIES	58	COPE (ENSNVIG00000019958) #7	DDX49 (ENSNVIG00000020003) #8	HOMER3 (ENSNVIG00000020032) #9	SUGP2 (ENSNVIG00000020116) #10	ARMC6 (ENSNVIG00000020143) #11	S2542 (ENSNVIG00000020166) #12	TMEM161A (ENSNVIG00000020180) #13	MEF2B (ENSNVIG00000020206) #14	BORCS8 (ENSNVIG00000020221)	RFXANK (ENSNVIG00000020264) #17	NR2CA (ENSNVIG00000020303) #16	NCAN (ENSNVIG00000020377) #18	HAPLN4 (ENSNVIG00000020713) #19	TM6SF2 (ENSNVIG00000020733) #20	SUGP1 (ENSNVIG00000020747) #21	MAU2 (ENSNVIG00000020762) #22	GATAD2A (ENSNVIG00000020782) #23	TSSK6 (ENSNVIG00000020829) #24	NDUFA13 (ENSNVIG00000020832) #25	YJEFN3 (ENSNVIG00000020838) #26	CILP2 (ENSNVIG00000020847) #27	PBX4 (ENSNVIG00000020863) #28	LPAR2 (ENSNVIG00000020878) #29	GMIP (ENSNVIG00000020899) #30	ATP13A1 (ENSNVIG00000020944) #31	ZNF502 (ENSNVIG00000020983)	ZNF501 (ENSNVIG00000020994)	K1143 (ENSNVIG00000020998)	KIF15 (ENSNVIG00000021010)	ENSNVIG00000021055	ZDHHC3 (ENSNVIG00000021069)
Ferret	MODERN SPECIES	238	CERS1 (ENSMPUG00000015497)	COPE (ENSMPUG00000015486) #7	DDX49 (ENSMPUG00000015485) #8	HOMER3 (ENSMPUG00000015484) #9	SUGP2 (ENSMPUG00000015478) #10	SLC25A42 (ENSMPUG00000015477) #12	TMEM161A (ENSMPUG00000015475) #13	MEF2B (ENSMPUG00000015473) #14	BORCS8 (ENSMPUG00000015471)	RFXANK (ENSMPUG00000015469) #17	NR2C2AP (ENSMPUG00000015462) #16	NCAN (ENSMPUG00000015433) #18	HAPLN4 (ENSMPUG00000015424) #19	TM6SF2 (ENSMPUG00000015407) #20	SUGP1 (ENSMPUG00000015404) #21	MAU2 (ENSMPUG00000015402) #22	GATAD2A (ENSMPUG00000015399) #23	TSSK6 (ENSMPUG00000019662) #24	YJEFN3 (ENSMPUG00000015390) #26	CILP2 (ENSMPUG00000015383) #27	PBX4 (ENSMPUG00000015365) #28	LPAR2 (ENSMPUG00000015364) #29	GMIP (ENSMPUG00000015351) #30	ATP13A1 (ENSMPUG00000015350) #31	ZNF502 (ENSMPUG00000015349)	KIAA1143 (ENSMPUG00000015348)	KIF15 (ENSMPUG00000015344)	TMEM42 (ENSMPUG00000015339)	ZDHHC3 (ENSMPUG00000015337)	EXOSC7 (ENSMPUG00000015336)	CLEC3B (ENSMPUG00000015333)
Canidae	ANCESTRAL SPECIES		ENSGT00390000003478.b #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00950000182890.D.d.c.d	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00390000003478.b #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00960000189525	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00950000182890.D.d.c.d	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690
Dog	MODERN SPECIES	12	COPE (ENSCAFG00845019400) #7	DDX49 (ENSCAFG00845019266) #8	HOMER3 (ENSCAFG00845019115) #9	SUGP2 (ENSCAFG00845018888) #10	ARMC6 (ENSCAFG00845018765) #11	SLC25A42 (ENSCAFG00845018653) #12	TMEM161A (ENSCAFG00845018423) #13	MEF2B (ENSCAFG00845018253) #14	BORCS8 (ENSCAFG00845018185)	NR2C2AP (ENSCAFG00845018085) #16	RFXANK (ENSCAFG00845014775) #17	NCAN (ENSCAFG00845014625) #18	HAPLN4 (ENSCAFG00845014588) #19	TM6SF2 (ENSCAFG00845014561) #20	SUGP1 (ENSCAFG00845014514) #21	MAU2 (ENSCAFG00845014470) #22	GATAD2A (ENSCAFG00845014383) #23	TSSK6 (ENSCAFG00845014349) #24	NDUFA13 (ENSCAFG00845014336) #25	YJEFN3 (ENSCAFG00845014306) #26	CILP2 (ENSCAFG00845014273) #27	PBX4 (ENSCAFG00845014230) #28	LPAR2 (ENSCAFG00845014191) #29	GMIP (ENSCAFG00845014134) #30	ATP13A1 (ENSCAFG00845014060) #31	ENSCAFG00845014000	ENSCAFG00845013976	KIAA1143 (ENSCAFG00845013959)	KIF15 (ENSCAFG00845013570)	ENSCAFG00845013403	ZDHHC3 (ENSCAFG00845013279)
Dingo	MODERN SPECIES	112	COPE (ENSCAFG00020012363) #7	DDX49 (ENSCAFG00020012375) #8	HOMER3 (ENSCAFG00020012389) #9	SUGP2 (ENSCAFG00020012392) #10	ARMC6 (ENSCAFG00020012404) #11	SLC25A42 (ENSCAFG00020012408) #12	TMEM161A (ENSCAFG00020012412) #13	MEF2B (ENSCAFG00020012425) #14	BORCS8 (ENSCAFG00020012435)	RFXANK (ENSCAFG00020012437) #17	NR2C2AP (ENSCAFG00020012443) #16	NCAN (ENSCAFG00020012454) #18	HAPLN4 (ENSCAFG00020012500) #19	TM6SF2 (ENSCAFG00020012504) #20	SUGP1 (ENSCAFG00020012508) #21	MAU2 (ENSCAFG00020012543) #22	GATAD2A (ENSCAFG00020012715) #23	TSSK6 (ENSCAFG00020012717) #24	NDUFA13 (ENSCAFG00020012721) #25	ENSCAFG00020012723	YJEFN3 (ENSCAFG00020012724) #26	CILP2 (ENSCAFG00020012728) #27	PBX4 (ENSCAFG00020012739) #28	LPAR2 (ENSCAFG00020012758) #29	GMIP (ENSCAFG00020012761) #30	ATP13A1 (ENSCAFG00020012802) #31	ZNF502 (ENSCAFG00020013240)	KIAA1143 (ENSCAFG00020013246)	KIF15 (ENSCAFG00020013252)	TMEM42 (ENSCAFG00020013305)	ZDHHC3 (ENSCAFG00020013308)
Red fox	MODERN SPECIES	5	ENSVVUG00000007777 #7	DDX49 (ENSVVUG00000007767) #8	HOMER3 (ENSVVUG00000007758) #9	SUGP2 (ENSVVUG00000007744) #10	ARMC6 (ENSVVUG00000007731) #11	SLC25A42 (ENSVVUG00000007728) #12	TMEM161A (ENSVVUG00000007683) #13	MEF2B (ENSVVUG00000007672) #14	BORCS8 (ENSVVUG00000007667)	RFXANK (ENSVVUG00000007633) #17	NR2C2AP (ENSVVUG00000007609) #16	NCAN (ENSVVUG00000007597) #18	HAPLN4 (ENSVVUG00000007594) #19	TM6SF2 (ENSVVUG00000007584) #20	SUGP1 (ENSVVUG00000007569) #21	MAU2 (ENSVVUG00000007527) #22	GATAD2A (ENSVVUG00000007522) #23	TSSK6 (ENSVVUG00000007516) #24	NDUFA13 (ENSVVUG00000007513) #25	YJEFN3 (ENSVVUG00000007502) #26	CILP2 (ENSVVUG00000007489) #27	PBX4 (ENSVVUG00000007478) #28	LPAR2 (ENSVVUG00000007473) #29	GMIP (ENSVVUG00000007227) #30	ATP13A1 (ENSVVUG00000007184) #31	ZNF502 (ENSVVUG00000007182)	ENSVVUG00000007176	KIAA1143 (ENSVVUG00000007169)	KIF15 (ENSVVUG00000007077)	TMEM42 (ENSVVUG00000007057)	ENSVVUG00000007053
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00950000182890.D.d.c	ENSGT00390000001296	ENSGT00940000156463	ENSGT00390000012690	ENSGT00940000155721
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00950000182890.D.d.c	ENSGT00390000001296	ENSGT00940000156463.e	ENSGT00390000012690	ENSGT00940000155721
Tiger	MODERN SPECIES	281	CERS1 (ENSPTIG00000010849)	COPE (ENSPTIG00000010957) #7	DDX49 (ENSPTIG00000011259) #8	HOMER3 (ENSPTIG00000011533) #9	SUGP2 (ENSPTIG00000012003) #10	ARMC6 (ENSPTIG00000012073) #11	SLC25A42 (ENSPTIG00000012354) #12	TMEM161A (ENSPTIG00000012395) #13	MEF2B (ENSPTIG00000012475) #14	BORCS8 (ENSPTIG00000012610)	RFXANK (ENSPTIG00000012655) #17	NR2C2AP (ENSPTIG00000012962) #16	HAPLN4 (ENSPTIG00000013017) #19	TM6SF2 (ENSPTIG00000013026) #20	SUGP1 (ENSPTIG00000013061) #21	MAU2 (ENSPTIG00000013179) #22	GATAD2A (ENSPTIG00000013272) #23	TSSK6 (ENSPTIG00000006514) #24	NDUFA13 (ENSPTIG00000013303) #25	YJEFN3 (ENSPTIG00000013321) #26	CILP2 (ENSPTIG00000013349) #27	PBX4 (ENSPTIG00000013405) #28	LPAR2 (ENSPTIG00000013412) #29	GMIP (ENSPTIG00000013444) #30	ZNF502 (ENSPTIG00000013634)	ENSPTIG00000006544	KIAA1143 (ENSPTIG00000013723)	ENSPTIG00000013732	ENSPTIG00000013744	TMEM42 (ENSPTIG00000013807)	ZDHHC3 (ENSPTIG00000013818)
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000163095.b	ENSGT00950000182890.D.d.c	ENSGT00390000001296	ENSGT00940000156463.e	ENSGT00390000012690	ENSGT00940000155721
lion	MODERN SPECIES	2	COPE (ENSPLOG00000000628) #7	DDX49 (ENSPLOG00000000667) #8	HOMER3 (ENSPLOG00000000722) #9	SUGP2 (ENSPLOG00000000772) #10	ARMC6 (ENSPLOG00000000792) #11	SLC25A42 (ENSPLOG00000000808) #12	TMEM161A (ENSPLOG00000000833) #13	MEF2B (ENSPLOG00000000863) #14	BORCS8 (ENSPLOG00000000887)	RFXANK (ENSPLOG00000000919) #17	ENSPLOG00000000980 #16	NCAN (ENSPLOG00000001120) #18	HAPLN4 (ENSPLOG00000001286) #19	TM6SF2 (ENSPLOG00000001308) #20	SUGP1 (ENSPLOG00000001334) #21	MAU2 (ENSPLOG00000001424) #22	GATAD2A (ENSPLOG00000001463) #23	TSSK6 (ENSPLOG00000001493) #24	NDUFA13 (ENSPLOG00000001502) #25	YJEFN3 (ENSPLOG00000001517) #26	CILP2 (ENSPLOG00000001532) #27	PBX4 (ENSPLOG00000001560) #28	LPAR2 (ENSPLOG00000001569) #29	GMIP (ENSPLOG00000001614) #30	ATP13A1 (ENSPLOG00000001767) #31	ZNF502 (ENSPLOG00000001805)	ENSPLOG00000001812	KIAA1143 (ENSPLOG00000001819)	KIF15 (ENSPLOG00000001861)	TMEM42 (ENSPLOG00000001938)	ZDHHC3 (ENSPLOG00000001963)
leopard	MODERN SPECIES	68	CERS1 (ENSPPRG00000021419)	COPE (ENSPPRG00000019668) #7	DDX49 (ENSPPRG00000013274) #8	HOMER3 (ENSPPRG00000013004) #9	SUGP2 (ENSPPRG00000010924) #10	ARMC6 (ENSPPRG00000009582) #11	SLC25A42 (ENSPPRG00000008936) #12	TMEM161A (ENSPPRG00000008638) #13	MEF2B (ENSPPRG00000006317) #14	BORCS8 (ENSPPRG00000004580)	RFXANK (ENSPPRG00000004266) #17	NR2C2AP (ENSPPRG00000003111) #16	HAPLN4 (ENSPPRG00000001581) #19	TM6SF2 (ENSPPRG00000001208) #20	SUGP1 (ENSPPRG00000000880) #21	MAU2 (ENSPPRG00000000643) #22	GATAD2A (ENSPPRG00000000270) #23	TSSK6 (ENSPPRG00000016235) #24	NDUFA13 (ENSPPRG00000022807) #25	YJEFN3 (ENSPPRG00000023619) #26	CILP2 (ENSPPRG00000023737) #27	PBX4 (ENSPPRG00000020424) #28	LPAR2 (ENSPPRG00000018123) #29	GMIP (ENSPPRG00000016893) #30	ATP13A1 (ENSPPRG00000014180) #31	ENSPPRG00000011672	ZNF502 (ENSPPRG00000011352)	ENSPPRG00000015943	KIAA1143 (ENSPPRG00000011059)	KIF15 (ENSPPRG00000010780)	ENSPPRG00000008691
Cat	MODERN SPECIES	1	UPF1 (ENSFCAG00000009757)	CERS1 (ENSFCAG00000023920) #7	DDX49 (ENSFCAG00000009760) #8	HOMER3 (ENSFCAG00000009762) #9	SUGP2 (ENSFCAG00000009765) #10	ARMC6 (ENSFCAG00000009767) #11	SLC25A42 (ENSFCAG00000009770) #12	TMEM161A (ENSFCAG00000009771) #13	MEF2B (ENSFCAG00000009774) #14	BORCS8 (ENSFCAG00000047348)	RFXANK (ENSFCAG00000009775) #17	NR2C2AP (ENSFCAG00000009777) #16	NCAN (ENSFCAG00000008376) #18	HAPLN4 (ENSFCAG00000022898) #19	SUGP1 (ENSFCAG00000009779) #21	MAU2 (ENSFCAG00000009780) #22	GATAD2A (ENSFCAG00000014327) #23	TSSK6 (ENSFCAG00000014328) #24	NDUFA13 (ENSFCAG00000014329) #25	YJEFN3 (ENSFCAG00000014330) #26	CILP2 (ENSFCAG00000014331) #27	PBX4 (ENSFCAG00000014536) #28	LPAR2 (ENSFCAG00000014538) #29	GMIP (ENSFCAG00000014540) #30	ATP13A1 (ENSFCAG00000014541) #31	ZNF502 (ENSFCAG00000024223)	ENSFCAG00000042601	KIAA1143 (ENSFCAG00000007638)	KIF15 (ENSFCAG00000007640)	TMEM42 (ENSFCAG00000007645)	ZDHHC3 (ENSFCAG00000007646)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Equus	ANCESTRAL SPECIES	23	ENSGT01030000234515.b	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT01090000261752	ENSGT00940000160464 #24	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00390000018500.a	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00940000161175	ENSGT00940000163610	ENSGT00940000162327	ENSGT01090000259995.a.a.b.a.b.b
Donkey	MODERN SPECIES		CERS1 (ENSEASG00005030456)	COPE (ENSEASG00005006557) #7	DDX49 (ENSEASG00005006560) #8	HOMER3 (ENSEASG00005006562) #9	SUGP2 (ENSEASG00005006565) #10	ARMC6 (ENSEASG00005006568) #11	SLC25A42 (ENSEASG00005006570) #12	TMEM161A (ENSEASG00005006575) #13	MEF2B (ENSEASG00005006578) #14	BORCS8 (ENSEASG00005006580)	RFXANK (ENSEASG00005006582) #17	NR2C2AP (ENSEASG00005027263) #16	NCAN (ENSEASG00005006587) #18	HAPLN4 (ENSEASG00005006590) #19	SUGP1 (ENSEASG00005006593) #21	MAU2 (ENSEASG00005006596) #22	GATAD2A (ENSEASG00005006602) #23	TSSK6 (ENSEASG00005006607) #24	ENSEASG00005028100	YJEFN3 (ENSEASG00005006613) #26	CILP2 (ENSEASG00005006616) #27	ENSEASG00005033171 #28	LPAR2 (ENSEASG00005031542) #29	GMIP (ENSEASG00005006622) #30	ENSEASG00005006649 #31	ENSEASG00005006747	ZNF672 (ENSEASG00005035295)	ZNF692 (ENSEASG00005006750)	ENSEASG00005006754	ENSEASG00005006758	ENSEASG00005006760
Horse	MODERN SPECIES	13	CERS1 (ENSECAG00000052582)	COPE (ENSECAG00000024390) #7	DDX49 (ENSECAG00000012194) #8	HOMER3 (ENSECAG00000023105) #9	SUGP2 (ENSECAG00000000129) #10	ARMC6 (ENSECAG00000006428) #11	SLC25A42 (ENSECAG00000011367) #12	TMEM161A (ENSECAG00000013963) #13	MEF2B (ENSECAG00000022642) #14	BORCS8 (ENSECAG00000007592)	RFXANK (ENSECAG00000009442) #17	NR2C2AP (ENSECAG00000015219) #16	NCAN (ENSECAG00000016115) #18	HAPLN4 (ENSECAG00000020045) #19	SUGP1 (ENSECAG00000013871) #21	MAU2 (ENSECAG00000001359) #22	GATAD2A (ENSECAG00000012875) #23	ENSECAG00000017590	TSSK6 (ENSECAG00000051056) #24	YJEFN3 (ENSECAG00000018123) #26	CILP2 (ENSECAG00000000250) #27	ENSECAG00000044009 #28	LPAR2 (ENSECAG00000009148) #29	GMIP (ENSECAG00000011647) #30	ATP13A1 (ENSECAG00000020569) #31	ENSECAG00000040482	ENSECAG00000045987	ENSECAG00000049438	SH3BP5L (ENSECAG00000000789)	ZNF672 (ENSECAG00000013991)	ZNF692 (ENSECAG00000015402)
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856	ENSGT00940000160753 #17	ENSGT00390000017748 #16	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00940000157178
Greater horseshoe bat	MODERN SPECIES	9	CERS1 (ENSRFEG00010005439)	DDX49 (ENSRFEG00010005585) #8	HOMER3 (ENSRFEG00010005693) #9	SUGP2 (ENSRFEG00010005746) #10	ARMC6 (ENSRFEG00010005797) #11	SLC25A42 (ENSRFEG00010005823) #12	TMEM161A (ENSRFEG00010005885) #13	MEF2B (ENSRFEG00010005974) #14	BORCS8 (ENSRFEG00010006052)	RFXANK (ENSRFEG00010006139) #17	NR2C2AP (ENSRFEG00010006230) #16	NCAN (ENSRFEG00010006275) #18	HAPLN4 (ENSRFEG00010006311) #19	TM6SF2 (ENSRFEG00010006340) #20	SUGP1 (ENSRFEG00010006391) #21	MAU2 (ENSRFEG00010006479) #22	GATAD2A (ENSRFEG00010006588) #23	TSSK6 (ENSRFEG00010006656) #24	NDUFA13 (ENSRFEG00010006692) #25	YJEFN3 (ENSRFEG00010006740) #26	CILP2 (ENSRFEG00010006782) #27	PBX4 (ENSRFEG00010006894) #28	LPAR2 (ENSRFEG00010007041) #29	GMIP (ENSRFEG00010007096) #30	ATP13A1 (ENSRFEG00010007191) #31	ENSRFEG00010007665	LPL (ENSRFEG00010007714)	MARCHF1 (ENSRFEG00010007829)	ENSRFEG00010007896	TMA16 (ENSRFEG00010007959)	TKTL2 (ENSRFEG00010008024)
Microbat	MODERN SPECIES	1248	DDX49 (ENSMLUG00000012159) #8	HOMER3 (ENSMLUG00000012170) #9	ENSMLUG00000025755	SUGP2 (ENSMLUG00000012189) #10	ENSMLUG00000012203 #11	SLC25A42 (ENSMLUG00000012208) #12	TMEM161A (ENSMLUG00000017352) #13	MEF2B (ENSMLUG00000003299) #14	BORCS8 (ENSMLUG00000025095)	RFXANK (ENSMLUG00000017354) #17	NR2C2AP (ENSMLUG00000017355) #16	NCAN (ENSMLUG00000017356) #18	HAPLN4 (ENSMLUG00000017358) #19	TM6SF2 (ENSMLUG00000027634) #20	SUGP1 (ENSMLUG00000017360) #21	MAU2 (ENSMLUG00000017362) #22	GATAD2A (ENSMLUG00000017364) #23	TSSK6 (ENSMLUG00000017365) #24	NDUFA13 (ENSMLUG00000017367) #25	YJEFN3 (ENSMLUG00000017368) #26	CILP2 (ENSMLUG00000017369) #27	LPAR2 (ENSMLUG00000007886) #29	GMIP (ENSMLUG00000023678) #30	ATP13A1 (ENSMLUG00000007903) #31	LPL (ENSMLUG00000000724)	ENSMLUG00000026606
Megabat	MODERN SPECIES	1678									MEF2B (ENSPVAG00000017435) #14	RFXANK (ENSPVAG00000017440) #17	NR2C2AP (ENSPVAG00000017442) #16	NCAN (ENSPVAG00000017445) #18	HAPLN4 (ENSPVAG00000017448) #19	TM6SF2 (ENSPVAG00000017449) #20	SUGP1 (ENSPVAG00000017451) #21	MAU2 (ENSPVAG00000017452) #22	GATAD2A (ENSPVAG00000017453) #23	NDUFA13 (ENSPVAG00000017454) #25	YJEFN3 (ENSPVAG00000017455) #26	CILP2 (ENSPVAG00000017456) #27	PBX4 (ENSPVAG00000017459) #28	LPAR2 (ENSPVAG00000017460) #29	GMIP (ENSPVAG00000017461) #30	ATP13A1 (ENSPVAG00000017462) #31
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000012198 #22
Common shrew	MODERN SPECIES	2019																MAU2 (ENSSARG00000011263) #22