Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Muroidea	ANCESTRAL SPECIES	47	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Northern American deer mouse	MODERN SPECIES	8	Cope (ENSPEMG00000018557) #7	Ddx49 (ENSPEMG00000009238) #8	Homer3 (ENSPEMG00000016382) #9	Sugp2 (ENSPEMG00000009700) #10	Armc6 (ENSPEMG00000012468) #11	Slc25a42 (ENSPEMG00000011354) #12	Tmem161a (ENSPEMG00000016451) #13	Mef2b (ENSPEMG00000018054) #14	Borcs8 (ENSPEMG00000010340) #15	Rfxank (ENSPEMG00000007761) #16	Nr2c2ap (ENSPEMG00000001962) #17	Ncan (ENSPEMG00000012564) #18	Hapln4 (ENSPEMG00000029211) #19	Tm6sf2 (ENSPEMG00000016397) #20	Sugp1 (ENSPEMG00000009253) #21	Mau2 (ENSPEMG00000016559) #22	Gatad2a (ENSPEMG00000012515) #23	Tssk6 (ENSPEMG00000007183) #24	Ndufa13 (ENSPEMG00000007743) #25	Yjefn3 (ENSPEMG00000011764) #26	Cilp2 (ENSPEMG00000008010) #27	Pbx4 (ENSPEMG00000010841) #28	Lpar2 (ENSPEMG00000012110) #29	Gmip (ENSPEMG00000006786) #30	Atp13a1 (ENSPEMG00000018771) #31	Zfp866 (ENSPEMG00000012624) #32	Zfp963 (ENSPEMG00000011994) #33	Zfp869 (ENSPEMG00000000596) #34	Zfp964 (ENSPEMG00000010305) #35	Zfp868 (ENSPEMG00000006111) #36	ENSPEMG00000026319 #37
Prairie vole	MODERN SPECIES	164	Cope (ENSMOCG00000014940) #7	Ddx49 (ENSMOCG00000018690) #8	Homer3 (ENSMOCG00000013590) #9	Sugp2 (ENSMOCG00000009704) #10	Armc6 (ENSMOCG00000014288) #11	Slc25a42 (ENSMOCG00000012570) #12	Tmem161a (ENSMOCG00000018852) #13	Mef2b (ENSMOCG00000000308) #14	ENSMOCG00000008996 #15	Rfxank (ENSMOCG00000021751) #16	Nr2c2ap (ENSMOCG00000003423) #17	Ncan (ENSMOCG00000020207) #18	Hapln4 (ENSMOCG00000000353) #19	Tm6sf2 (ENSMOCG00000018885) #20	Sugp1 (ENSMOCG00000014670) #21	Mau2 (ENSMOCG00000003213) #22	Gatad2a (ENSMOCG00000001060) #23	Tssk6 (ENSMOCG00000007466) #24	Ndufa13 (ENSMOCG00000015070) #25	Yjefn3 (ENSMOCG00000019664) #26	Cilp2 (ENSMOCG00000018051) #27	Pbx4 (ENSMOCG00000001326) #28	Lpar2 (ENSMOCG00000014804) #29	ENSMOCG00000019025	Atp13a1 (ENSMOCG00000001496) #31	Zfp866 (ENSMOCG00000007573) #32	Zfp963 (ENSMOCG00000016227) #33	Zfp869 (ENSMOCG00000001013) #34	Zfp964 (ENSMOCG00000003187) #35	Zfp868 (ENSMOCG00000002776) #36
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Chinese hamster chok1gshd	MODERN SPECIES	184	COPE (ENSCGRG00001024248) #7	Ddx49 (ENSCGRG00001009467) #8	Homer3 (ENSCGRG00001014952) #9	Sugp2 (ENSCGRG00001018264) #10	Armc6 (ENSCGRG00001019296) #11	Slc25a42 (ENSCGRG00001022045) #12	Tmem161a (ENSCGRG00001022808) #13	Mef2b (ENSCGRG00001014460) #14	Borcs8 (ENSCGRG00001020163) #15	Rfxank (ENSCGRG00001000782) #16	Nr2c2ap (ENSCGRG00001011302) #17	Ncan (ENSCGRG00001015055) #18	Hapln4 (ENSCGRG00001018509) #19	Tm6sf2 (ENSCGRG00001019424) #20	Sugp1 (ENSCGRG00001021250) #21	Mau2 (ENSCGRG00001009180) #22	Gatad2a (ENSCGRG00001018413) #23	Tssk6 (ENSCGRG00001010147) #24	Ndufa13 (ENSCGRG00001022785) #25	Yjefn3 (ENSCGRG00001023789) #26	Cilp2 (ENSCGRG00001007338) #27	Pbx4 (ENSCGRG00001014693) #28	Lpar2 (ENSCGRG00001015085) #29	Gmip (ENSCGRG00001000197) #30	Atp13a1 (ENSCGRG00001012808) #31	Zfp866 (ENSCGRG00001019443) #32	Zfp963 (ENSCGRG00001021819) #33	Zfp869 (ENSCGRG00001022854) #34	Zfp964 (ENSCGRG00001016061) #35	Zfp868 (ENSCGRG00001024449) #36	ENSCGRG00001007777
Golden Hamster	MODERN SPECIES	831	Cope (ENSMAUG00000016322) #7	Ddx49 (ENSMAUG00000010235) #8	Homer3 (ENSMAUG00000014150) #9	Sugp2 (ENSMAUG00000011371) #10	Armc6 (ENSMAUG00000011324) #11	Slc25a42 (ENSMAUG00000018082) #12	Tmem161a (ENSMAUG00000011694) #13	Mef2b (ENSMAUG00000006774) #14	Borcs8 (ENSMAUG00000014785) #15	Rfxank (ENSMAUG00000002477) #16	Nr2c2ap (ENSMAUG00000003921) #17	Ncan (ENSMAUG00000007276) #18	Hapln4 (ENSMAUG00000011983) #19	Tm6sf2 (ENSMAUG00000001556) #20	Sugp1 (ENSMAUG00000016683) #21	Mau2 (ENSMAUG00000021335) #22	Gatad2a (ENSMAUG00000021128) #23	Tssk6 (ENSMAUG00000008397) #24	Ndufa13 (ENSMAUG00000019158) #25	Yjefn3 (ENSMAUG00000021666) #26	Cilp2 (ENSMAUG00000005034) #27	Pbx4 (ENSMAUG00000000855) #28	Lpar2 (ENSMAUG00000020957) #29	Gmip (ENSMAUG00000020071) #30	Atp13a1 (ENSMAUG00000022087) #31	Zfp866 (ENSMAUG00000013777) #32	Zfp963 (ENSMAUG00000012846) #33	Zfp964 (ENSMAUG00000017867) #35	Zfp868 (ENSMAUG00000007713) #36	ENSMAUG00000000837
Murinae	ANCESTRAL SPECIES	23	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36	ENSGT00940000154078.a.b
Mus	ANCESTRAL SPECIES	6	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Mouse	MODERN SPECIES	17	Cope (ENSMUSG00000055681) #7	Ddx49 (ENSMUSG00000057788) #8	Homer3 (ENSMUSG00000003573) #9	Sugp2 (ENSMUSG00000036054) #10	Armc6 (ENSMUSG00000002343) #11	Slc25a42 (ENSMUSG00000002346) #12	Tmem161a (ENSMUSG00000002342) #13	Mef2b (ENSMUSG00000079033) #14	Borcs8 (ENSMUSG00000002345) #15	Nr2c2ap (ENSMUSG00000071078) #17	Rfxank (ENSMUSG00000036120) #16	Ncan (ENSMUSG00000002341) #18	Hapln4 (ENSMUSG00000007594) #19	Tm6sf2 (ENSMUSG00000036151) #20	Sugp1 (ENSMUSG00000011306) #21	Mau2 (ENSMUSG00000031858) #22	Gatad2a (ENSMUSG00000036180) #23	Tssk6 (ENSMUSG00000047654) #24	Ndufa13 (ENSMUSG00000036199) #25	Yjefn3 (ENSMUSG00000048967) #26	Cilp2 (ENSMUSG00000044006) #27	Pbx4 (ENSMUSG00000031860) #28	Lpar2 (ENSMUSG00000031861) #29	Gmip (ENSMUSG00000036246) #30	Atp13a1 (ENSMUSG00000031862) #31	Zfp866 (ENSMUSG00000043090) #32	Gm20422 (ENSMUSG00000092544)	Zfp963 (ENSMUSG00000092260) #33	Zfp869 (ENSMUSG00000054648) #34	Zfp964 (ENSMUSG00000091764) #35	Zfp868 (ENSMUSG00000060427) #36
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.k.a.a #32	ENSGT00940000164244.b	ENSGT00950000182755.b.a.a.b.a.a.k.b.a #33	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.b #34	ENSGT00950000182755.b.a.a.b.a.a.k.b.b #35	ENSGT00950000182755.b.a.a.b.a.a.k.a.b.a #36
Steppe mouse	MODERN SPECIES	2734	Cope (ENSMSIG00000032053) #7	Ddx49 (ENSMSIG00000032052) #8	Homer3 (ENSMSIG00000032051) #9	Sugp2 (ENSMSIG00000032050) #10	Armc6 (ENSMSIG00000032049) #11	Slc25a42 (ENSMSIG00000032048) #12	Tmem161a (ENSMSIG00000032047) #13	ENSMSIG00000032046 #14	Borcs8 (ENSMSIG00000032045) #15	Rfxank (ENSMSIG00000032044) #16	Nr2c2ap (ENSMSIG00000032043) #17	Ncan (ENSMSIG00000032040) #18	Hapln4 (ENSMSIG00000032039) #19	Tm6sf2 (ENSMSIG00000032038) #20	Sugp1 (ENSMSIG00000032037) #21	Mau2 (ENSMSIG00000032036) #22	Gatad2a (ENSMSIG00000032035) #23	Tssk6 (ENSMSIG00000032034) #24	Ndufa13 (ENSMSIG00000032033) #25	Yjefn3 (ENSMSIG00000032032) #26	Cilp2 (ENSMSIG00000032031) #27	Pbx4 (ENSMSIG00000032030) #28
spretus	MODERN SPECIES	17	Cope (MGP_SPRETEiJ_G0032258) #7	Ddx49 (MGP_SPRETEiJ_G0032257) #8	Homer3 (MGP_SPRETEiJ_G0032256) #9	Sugp2 (MGP_SPRETEiJ_G0032255) #10	Armc6 (MGP_SPRETEiJ_G0032254) #11	Slc25a42 (MGP_SPRETEiJ_G0032253) #12	Tmem161a (MGP_SPRETEiJ_G0032252) #13	MGP_SPRETEiJ_G0032251 #14	MGP_SPRETEiJ_G0032250 #14	Nr2c2ap (MGP_SPRETEiJ_G0032249) #17	Rfxank (MGP_SPRETEiJ_G0032248) #16	Ncan (MGP_SPRETEiJ_G0032247) #18	Hapln4 (MGP_SPRETEiJ_G0032246) #19	Tm6sf2 (MGP_SPRETEiJ_G0032245) #20	Sugp1 (MGP_SPRETEiJ_G0032244) #21	Mau2 (MGP_SPRETEiJ_G0032243) #22	Gatad2a (MGP_SPRETEiJ_G0032242) #23	Tssk6 (MGP_SPRETEiJ_G0032241) #24	Ndufa13 (MGP_SPRETEiJ_G0032240) #25	Yjefn3 (MGP_SPRETEiJ_G0032239) #26	Cilp2 (MGP_SPRETEiJ_G0032238) #27	Pbx4 (MGP_SPRETEiJ_G0032237) #28	Lpar2 (MGP_SPRETEiJ_G0032236) #29	Gmip (MGP_SPRETEiJ_G0032235) #30	Atp13a1 (MGP_SPRETEiJ_G0032234) #31	Zfp866 (MGP_SPRETEiJ_G0032233) #32	MGP_SPRETEiJ_G0032232	Zfp963 (MGP_SPRETEiJ_G0032231) #33	Zfp869 (MGP_SPRETEiJ_G0032230) #34	Zfp964 (MGP_SPRETEiJ_G0032229) #35	Zfp868 (MGP_SPRETEiJ_G0032228) #36
Ryukyu mouse	MODERN SPECIES	17	Cope (MGP_CAROLIEiJ_G0031140) #7	Ddx49 (MGP_CAROLIEiJ_G0031139) #8	Homer3 (MGP_CAROLIEiJ_G0031138) #9	Sugp2 (MGP_CAROLIEiJ_G0031137) #10	Armc6 (MGP_CAROLIEiJ_G0031136) #11	Slc25a42 (MGP_CAROLIEiJ_G0031135) #12	Tmem161a (MGP_CAROLIEiJ_G0031134) #13	MGP_CAROLIEiJ_G0031133 #14	MGP_CAROLIEiJ_G0031132 #14	Nr2c2ap (MGP_CAROLIEiJ_G0031131) #17	Rfxank (MGP_CAROLIEiJ_G0031130) #16	Ncan (MGP_CAROLIEiJ_G0031129) #18	Hapln4 (MGP_CAROLIEiJ_G0031128) #19	Tm6sf2 (MGP_CAROLIEiJ_G0031127) #20	Sugp1 (MGP_CAROLIEiJ_G0031126) #21	Mau2 (MGP_CAROLIEiJ_G0031125) #22	Gatad2a (MGP_CAROLIEiJ_G0031124) #23	Tssk6 (MGP_CAROLIEiJ_G0031123) #24	Ndufa13 (MGP_CAROLIEiJ_G0031122) #25	Yjefn3 (MGP_CAROLIEiJ_G0031121) #26	Cilp2 (MGP_CAROLIEiJ_G0031120) #27	Pbx4 (MGP_CAROLIEiJ_G0031119) #28	Lpar2 (MGP_CAROLIEiJ_G0031118) #29	Gmip (MGP_CAROLIEiJ_G0031117) #30	Atp13a1 (MGP_CAROLIEiJ_G0031116) #31	Zfp866 (MGP_CAROLIEiJ_G0031115) #32	MGP_CAROLIEiJ_G0031114	Zfp963 (MGP_CAROLIEiJ_G0031113) #33	Zfp869 (MGP_CAROLIEiJ_G0031112) #34	Zfp964 (MGP_CAROLIEiJ_G0031111) #35	Zfp868 (MGP_CAROLIEiJ_G0031110) #36
Shrew mouse	MODERN SPECIES	10	Cope (MGP_PahariEiJ_G0021605) #7	Ddx49 (MGP_PahariEiJ_G0021604) #8	Homer3 (MGP_PahariEiJ_G0021603) #9	Sugp2 (MGP_PahariEiJ_G0021602) #10	Armc6 (MGP_PahariEiJ_G0021601) #11	Slc25a42 (MGP_PahariEiJ_G0021600) #12	Tmem161a (MGP_PahariEiJ_G0021599) #13	MGP_PahariEiJ_G0021598 #14	MGP_PahariEiJ_G0021597 #14	Nr2c2ap (MGP_PahariEiJ_G0021596) #17	Rfxank (MGP_PahariEiJ_G0021595) #16	Ncan (MGP_PahariEiJ_G0021594) #18	Hapln4 (MGP_PahariEiJ_G0021593) #19	Tm6sf2 (MGP_PahariEiJ_G0021592) #20	Sugp1 (MGP_PahariEiJ_G0021591) #21	Mau2 (MGP_PahariEiJ_G0021590) #22	Gatad2a (MGP_PahariEiJ_G0021589) #23	Tssk6 (MGP_PahariEiJ_G0021588) #24	Ndufa13 (MGP_PahariEiJ_G0021587) #25	Yjefn3 (MGP_PahariEiJ_G0021586) #26	Cilp2 (MGP_PahariEiJ_G0021585) #27	Pbx4 (MGP_PahariEiJ_G0021584) #28	Lpar2 (MGP_PahariEiJ_G0021583) #29	Gmip (MGP_PahariEiJ_G0021582) #30	Atp13a1 (MGP_PahariEiJ_G0021581) #31	Zfp866 (MGP_PahariEiJ_G0021580) #32	MGP_PahariEiJ_G0021579	Zfp963 (MGP_PahariEiJ_G0021578) #33	Zfp869 (MGP_PahariEiJ_G0021577) #34	Zfp964 (MGP_PahariEiJ_G0021576) #35	Zfp868 (MGP_PahariEiJ_G0021575) #36
Rat	MODERN SPECIES	7	Cope (ENSRNOG00000020178) #7	Ddx49 (ENSRNOG00000022368) #8	Homer3 (ENSRNOG00000020229) #9	Sugp2 (ENSRNOG00000020269) #10	Armc6 (ENSRNOG00000020280) #11	Slc25a42 (ENSRNOG00000020345) #12	Tmem161a (ENSRNOG00000020390) #13	Mef2b (ENSRNOG00000020400) #14	Borcs8 (ENSRNOG00000020427) #15	Rfxank (ENSRNOG00000033318) #16	Nr2c2ap (ENSRNOG00000022247) #17	Ncan (ENSRNOG00000048036) #18	Hapln4 (ENSRNOG00000049949) #19	Tm6sf2 (ENSRNOG00000042237) #20	Sugp1 (ENSRNOG00000052111) #21	Mau2 (ENSRNOG00000020526) #22	Gatad2a (ENSRNOG00000022173) #23	Tssk6 (ENSRNOG00000020599) #24	Ndufa13 (ENSRNOG00000020602) #25	Yjefn3 (ENSRNOG00000039191) #26	Cilp2 (ENSRNOG00000020622) #27	Pbx4 (ENSRNOG00000010736) #28	Lpar2 (ENSRNOG00000010758) #29	Gmip (ENSRNOG00000027257) #30	Atp13a1 (ENSRNOG00000010776) #31	LOC108348302 (ENSRNOG00000011492) #32	Zfp866 (ENSRNOG00000042580) #33	Zfp869 (ENSRNOG00000033351) #34	Zfp964 (ENSRNOG00000042504) #35	LOC102551257 (ENSRNOG00000067812)	Zfp868 (ENSRNOG00000028919) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Cope (ENSNGAG00000022394) #7	Ddx49 (ENSNGAG00000019673) #8	Homer3 (ENSNGAG00000015803) #9	Sugp2 (ENSNGAG00000005936) #10	Armc6 (ENSNGAG00000021205) #11	Slc25a42 (ENSNGAG00000023980) #12	Tmem161a (ENSNGAG00000023788) #13	Mef2b (ENSNGAG00000010342) #14	Borcs8 (ENSNGAG00000023653) #15	Rfxank (ENSNGAG00000012986) #16	Nr2c2ap (ENSNGAG00000010770) #17	Ncan (ENSNGAG00000022597) #18	Hapln4 (ENSNGAG00000014554) #19	Tm6sf2 (ENSNGAG00000020192) #20	Sugp1 (ENSNGAG00000018965) #21	Mau2 (ENSNGAG00000015571) #22	Gatad2a (ENSNGAG00000004469) #23	Tssk6 (ENSNGAG00000001299) #24	Ndufa13 (ENSNGAG00000023080) #25	Yjefn3 (ENSNGAG00000021673) #26	Cilp2 (ENSNGAG00000011748) #27	Pbx4 (ENSNGAG00000013031) #28	Lpar2 (ENSNGAG00000022925) #29	Gmip (ENSNGAG00000012947) #30	Atp13a1 (ENSNGAG00000021636) #31	Zfp866 (ENSNGAG00000012916) #32	ENSNGAG00000022982 ##32	Zfp869 (ENSNGAG00000024282) #34	Zfp868 (ENSNGAG00000021523) #36
Lesser Egyptian jerboa	MODERN SPECIES	127	Comp (ENSJJAG00000011685)	Upf1 (ENSJJAG00000023151)	ENSJJAG00000000262	ENSJJAG00000016264	Cope (ENSJJAG00000017037) #7	Homer3 (ENSJJAG00000014551) #9	Sugp2 (ENSJJAG00000005264) #10	Armc6 (ENSJJAG00000014237) #11	Slc25a42 (ENSJJAG00000018672) #12	Mef2b (ENSJJAG00000009955) #14	Nr2c2ap (ENSJJAG00000023882) #17	Ncan (ENSJJAG00000018295) #18	Hapln4 (ENSJJAG00000016332) #19	Tm6sf2 (ENSJJAG00000023997) #20	Sugp1 (ENSJJAG00000013477) #21	Mau2 (ENSJJAG00000021815) #22	Gatad2a (ENSJJAG00000014763) #23	Tssk6 (ENSJJAG00000006030) #24	Ndufa13 (ENSJJAG00000021903) #25	Pbx4 (ENSJJAG00000010902) #28	Lpar2 (ENSJJAG00000022302) #29	Gmip (ENSJJAG00000013017) #30	Atp13a1 (ENSJJAG00000010806) #31	Mvb12a (ENSJJAG00000019047)	Ccdc194 (ENSJJAG00000013119)	Plvap (ENSJJAG00000000206)	Ano8 (ENSJJAG00000011527)	Dda1 (ENSJJAG00000021059)	Mrpl34 (ENSJJAG00000018808)	Abhd8 (ENSJJAG00000010342)	Ankle1 (ENSJJAG00000014888)
Kangaroo rat	MODERN SPECIES	427	ENSDORG00000023557	Cope (ENSDORG00000004298) #7	Ddx49 (ENSDORG00000004301) #8	ENSDORG00000004302 #9	Sugp2 (ENSDORG00000011519) #10	ENSDORG00000004418 #11	Slc25a42 (ENSDORG00000010998) #12	ENSDORG00000010999 #13	ENSDORG00000011003 #14	Borcs8 (ENSDORG00000027906) #15	Rfxank (ENSDORG00000001449) #16	Nr2c2ap (ENSDORG00000001440) #17	Hapln4 (ENSDORG00000004912) #19	Tm6sf2 (ENSDORG00000004913) #20	ENSDORG00000024315 #21	Mau2 (ENSDORG00000004918) #22	Gatad2a (ENSDORG00000008536) #23	Tssk6 (ENSDORG00000008538) #24	Lpar2 (ENSDORG00000023437) #29	Gmip (ENSDORG00000005179) #30	Atp13a1 (ENSDORG00000005185) #31	ENSDORG00000012240	ENSDORG00000027508	Rab8a (ENSDORG00000028823)	Cib3 (ENSDORG00000002313)	Fam32a (ENSDORG00000027872)	Eps15l1 (ENSDORG00000012303)	Calr3 (ENSDORG00000013084)	Cherp (ENSDORG00000027623)	Med26 (ENSDORG00000012119)	Slc35e1 (ENSDORG00000012110)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00940000159742	ENSGT00940000158279	ENSGT00940000156347
Marmotini	ANCESTRAL SPECIES	12	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.l ##32	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00940000159742
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT00940000162643 #28	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT00950000182755.b.a.a.b.a.a.l ##32	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.b	ENSGT00960000186612.B.a.b.a.b.a.b.i.a.a.b	ENSGT00390000000410	ENSGT00940000160737	ENSGT00390000018390.yb
Arctic ground squirrel	MODERN SPECIES	73	COPE (ENSUPAG00010018276) #7	DDX49 (ENSUPAG00010018246) #8	HOMER3 (ENSUPAG00010018230) #9	SUGP2 (ENSUPAG00010018216) #10	ARMC6 (ENSUPAG00010018208) #11	SLC25A42 (ENSUPAG00010018191) #12	TMEM161A (ENSUPAG00010018179) #13	MEF2B (ENSUPAG00010018172) #14	BORCS8 (ENSUPAG00010018165) #15	RFXANK (ENSUPAG00010018152) #16	NR2C2AP (ENSUPAG00010018146) #17	NCAN (ENSUPAG00010018127) #18	HAPLN4 (ENSUPAG00010018121) #19	TM6SF2 (ENSUPAG00010018116) #20	SUGP1 (ENSUPAG00010018104) #21	MAU2 (ENSUPAG00010018075) #22	GATAD2A (ENSUPAG00010018036) #23	TSSK6 (ENSUPAG00010018027) #24	YJEFN3 (ENSUPAG00010018017) #26	CILP2 (ENSUPAG00010018008) #27	PBX4 (ENSUPAG00010017995) #28	LPAR2 (ENSUPAG00010017989) #29	GMIP (ENSUPAG00010017934) #30	ATP13A1 (ENSUPAG00010017873) #31	ENSUPAG00010017861 ##32	ENSUPAG00010017854	ENSUPAG00010017852	CAMP (ENSUPAG00010017843)	ENSUPAG00010017839	CDC25A (ENSUPAG00010017812)	ENSUPAG00010017794
Squirrel	MODERN SPECIES	196	COPE (ENSSTOG00000006736) #7	DDX49 (ENSSTOG00000006749) #8	HOMER3 (ENSSTOG00000029095) #9	SUGP2 (ENSSTOG00000026887) #10	ARMC6 (ENSSTOG00000012997) #11	SLC25A42 (ENSSTOG00000022047) #12	TMEM161A (ENSSTOG00000005867) #13	MEF2B (ENSSTOG00000005895) #14	BORCS8 (ENSSTOG00000025422) #15	RFXANK (ENSSTOG00000024080) #16	NR2C2AP (ENSSTOG00000001006) #17	NCAN (ENSSTOG00000001012) #18	HAPLN4 (ENSSTOG00000007240) #19	TM6SF2 (ENSSTOG00000025054) #20	SUGP1 (ENSSTOG00000001020) #21	MAU2 (ENSSTOG00000001026) #22	GATAD2A (ENSSTOG00000022640) #23	TSSK6 (ENSSTOG00000021351) #24	NDUFA13 (ENSSTOG00000022888) #25	YJEFN3 (ENSSTOG00000023979) #26	CILP2 (ENSSTOG00000026823) #27	ENSSTOG00000019762	PBX4 (ENSSTOG00000007166) #28	LPAR2 (ENSSTOG00000021678) #29	GMIP (ENSSTOG00000007176) #30	ATP13A1 (ENSSTOG00000007205) #31	CAMP (ENSSTOG00000015157)	ENSSTOG00000034924	CDC25A (ENSSTOG00000015144)	ENSSTOG00000024015	ENSSTOG00000026772
Alpin marmot	MODERN SPECIES	24	COPE (ENSMMMG00000002634) #7	DDX49 (ENSMMMG00000002658) #8	HOMER3 (ENSMMMG00000002691) #9	SUGP2 (ENSMMMG00000002743) #10	ARMC6 (ENSMMMG00000002877) #11	SLC25A42 (ENSMMMG00000002914) #12	TMEM161A (ENSMMMG00000002937) #13	MEF2B (ENSMMMG00000002982) #14	BORCS8 (ENSMMMG00000003015) #15	RFXANK (ENSMMMG00000003029) #16	NR2C2AP (ENSMMMG00000003044) #17	NCAN (ENSMMMG00000003066) #18	HAPLN4 (ENSMMMG00000003386) #19	TM6SF2 (ENSMMMG00000003397) #20	SUGP1 (ENSMMMG00000003416) #21	MAU2 (ENSMMMG00000003432) #22	GATAD2A (ENSMMMG00000003539) #23	TSSK6 (ENSMMMG00000003603) #24	NDUFA13 (ENSMMMG00000003609) #25	YJEFN3 (ENSMMMG00000003614) #26	CILP2 (ENSMMMG00000003635) #27	PBX4 (ENSMMMG00000003652) #28	ENSMMMG00000003669	LPAR2 (ENSMMMG00000003676) #29	GMIP (ENSMMMG00000003685) #30	ATP13A1 (ENSMMMG00000003751) #31	ENSMMMG00000003843 ##32	ENSMMMG00000003852	ENSMMMG00000003860	ENSMMMG00000003867	ENSMMMG00000003887
Eurasian red squirrel	MODERN SPECIES	7	DDX49 (ENSSVLG00005016654) #8	HOMER3 (ENSSVLG00005016701) #9	SUGP2 (ENSSVLG00005016823) #10	ARMC6 (ENSSVLG00005016951) #11	SLC25A42 (ENSSVLG00005017005) #12	TMEM161A (ENSSVLG00005017057) #13	MEF2B (ENSSVLG00005017215) #14	BORCS8 (ENSSVLG00005017305) #15	RFXANK (ENSSVLG00005017362) #16	NR2C2AP (ENSSVLG00005017403) #17	NCAN (ENSSVLG00005017503) #18	ENSSVLG00005017692	HAPLN4 (ENSSVLG00005017756) #19	TM6SF2 (ENSSVLG00005017792) #20	SUGP1 (ENSSVLG00005017843) #21	MAU2 (ENSSVLG00005017993) #22	GATAD2A (ENSSVLG00005018054) #23	TSSK6 (ENSSVLG00005018119) #24	NDUFA13 (ENSSVLG00005018132) #25	YJEFN3 (ENSSVLG00005018175) #26	CILP2 (ENSSVLG00005018243) #27	PBX4 (ENSSVLG00005018272) #28	LPAR2 (ENSSVLG00005018364) #29	GMIP (ENSSVLG00005018416) #30	ATP13A1 (ENSSVLG00005018497) #31	ENSSVLG00005018537 ##32	ENSSVLG00005018572	ENSSVLG00005018591	ZNF670 (ENSSVLG00005018638)	ENSSVLG00005018685	ENSSVLG00005018729
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000006789 #8	HOMER3 (ENSHGLG00000006851) #9	ARMC6 (ENSHGLG00000008147) #11	SLC25A42 (ENSHGLG00000008826) #12	TMEM161A (ENSHGLG00000009517) #13	ENSHGLG00000003123 #14	MEF2BNB (ENSHGLG00000047513) #15	RFXANK (ENSHGLG00000003396) #16	NR2C2AP (ENSHGLG00000033726) #17	NCAN (ENSHGLG00000034381) #18	HAPLN4 (ENSHGLG00000003896) #19	TM6SF2 (ENSHGLG00000004113) #20	ENSHGLG00000042474 #21	ENSHGLG00000039617 #10	ENSHGLG00000048186 #21	ENSHGLG00000049094 #22	GATAD2A (ENSHGLG00000003176) #23	TSSK6 (ENSHGLG00000020778) #24	NDUFA13 (ENSHGLG00000018628) #25	YJEFN3 (ENSHGLG00000019524) #26	CILP2 (ENSHGLG00000018931) #27	LPAR2 (ENSHGLG00000035704) #29	ENSHGLG00000013806 #30	ENSHGLG00000003184	ENSHGLG00000042271	ENSHGLG00000044603	ENSHGLG00000046812	ENSHGLG00000039559	ENSHGLG00000049921	ENSHGLG00000020580	ENSHGLG00000021231
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000163163
Guinea pig	MODERN SPECIES	72	CERS1 (ENSCPOG00000033783)	COPE (ENSCPOG00000013624) #7	DDX49 (ENSCPOG00000013626) #8	HOMER3 (ENSCPOG00000004565) #9	SUGP2 (ENSCPOG00000006372) #10	ARMC6 (ENSCPOG00000006374) #11	SLC25A42 (ENSCPOG00000013086) #12	TMEM161A (ENSCPOG00000013640) #13	MEF2B (ENSCPOG00000032781) #14	BORCS8 (ENSCPOG00000036178) #15	RFXANK (ENSCPOG00000003121) #16	NR2C2AP (ENSCPOG00000032927) #17	HAPLN4 (ENSCPOG00000023683) #19	TM6SF2 (ENSCPOG00000022916) #20	SUGP1 (ENSCPOG00000007797) #21	MAU2 (ENSCPOG00000003755) #22	GATAD2A (ENSCPOG00000015396) #23	TSSK6 (ENSCPOG00000024320) #24	NDUFA13 (ENSCPOG00000019995) #25	YJEFN3 (ENSCPOG00000023842) #26	CILP2 (ENSCPOG00000007219) #27	LPAR2 (ENSCPOG00000012652) #29	GMIP (ENSCPOG00000011161) #30	ATP13A1 (ENSCPOG00000011167) #31	ENSCPOG00000022796
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00390000003478 #7	ENSGT00730000111231 #8	ENSGT00940000158081 #9	ENSGT00410000025695.b #10	ENSGT00390000002913 #11	ENSGT00940000158163 #12	ENSGT00390000000672.a.a #13	ENSGT00940000160699 #14	ENSGT00390000014856 #15	ENSGT00940000160753 #16	ENSGT00390000017748 #17	ENSGT00940000158649 #18	ENSGT00940000160926 #19	ENSGT00390000012913.a #20	ENSGT00410000025695.a #21	ENSGT00390000012198 #22	ENSGT00390000004097.a #23	ENSGT00940000160464 #24	ENSGT00390000000719 #25	ENSGT00390000007227.b #26	ENSGT00390000008152.B.a #27	ENSGT01050000244941.B.c #29	ENSGT00950000183110.a #30	ENSGT00550000075064 #31	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000161678	ENSGT00940000160466	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000155438.b
Long-tailed chinchilla	MODERN SPECIES	231	COPE (ENSCLAG00000003621) #7	DDX49 (ENSCLAG00000012844) #8	HOMER3 (ENSCLAG00000011599) #9	SUGP2 (ENSCLAG00000011375) #10	ARMC6 (ENSCLAG00000008215) #11	SLC25A42 (ENSCLAG00000008004) #12	TMEM161A (ENSCLAG00000007578) #13	MEF2B (ENSCLAG00000007377) #14	BORCS8 (ENSCLAG00000004959) #15	RFXANK (ENSCLAG00000004632) #16	NR2C2AP (ENSCLAG00000004378) #17	NCAN (ENSCLAG00000004140) #18	HAPLN4 (ENSCLAG00000003955) #19	TM6SF2 (ENSCLAG00000003633) #20	SUGP1 (ENSCLAG00000003512) #21	MAU2 (ENSCLAG00000006535) #22	GATAD2A (ENSCLAG00000010160) #23	TSSK6 (ENSCLAG00000018107) #24	NDUFA13 (ENSCLAG00000016915) #25	YJEFN3 (ENSCLAG00000016158) #26	CILP2 (ENSCLAG00000015928) #27	LPAR2 (ENSCLAG00000016969) #29	GMIP (ENSCLAG00000008010) #30	ATP13A1 (ENSCLAG00000009549) #31	ENSCLAG00000007428	ENSCLAG00000007229	DDX11 (ENSCLAG00000007090)	ENSCLAG00000006498 ##32	ENSCLAG00000006263 ##32	TPM4 (ENSCLAG00000006213)	RAB8A (ENSCLAG00000006073)
Degu	MODERN SPECIES	323	COPE (ENSODEG00000011547) #7	DDX49 (ENSODEG00000011203) #8	HOMER3 (ENSODEG00000014870) #9	SUGP2 (ENSODEG00000012058) #10	ARMC6 (ENSODEG00000012613) #11	SLC25A42 (ENSODEG00000012168) #12	TMEM161A (ENSODEG00000012343) #13	MEF2B (ENSODEG00000012357) #14	BORCS8 (ENSODEG00000013003) #15	RFXANK (ENSODEG00000013006) #16	NR2C2AP (ENSODEG00000011486) #17	NCAN (ENSODEG00000011699) #18	HAPLN4 (ENSODEG00000011689) #19	TM6SF2 (ENSODEG00000010936) #20	SUGP1 (ENSODEG00000011538) #21	MAU2 (ENSODEG00000012887) #22	GATAD2A (ENSODEG00000013506) #23	TSSK6 (ENSODEG00000020032) #24	NDUFA13 (ENSODEG00000013435) #25	YJEFN3 (ENSODEG00000011107) #26	CILP2 (ENSODEG00000010764) #27	LPAR2 (ENSODEG00000010920) #29	GMIP (ENSODEG00000010205) #30	ATP13A1 (ENSODEG00000010691) #31	ENSODEG00000019897	ENSODEG00000011452	ENSODEG00000010301	ENSODEG00000011437