Gnathostomata ANCESTRAL SPECIES ENSGT00950000183007 #22 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES 255 ENSGT01100000263573.a.a.a ENSGT01100000263535.b.a.b ENSGT00940000163304 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000161392 ENSGT00390000003308.a ENSGT00950000182929.B.a ENSGT00950000182929.B.b ENSGT00390000011584 ENSGT00390000007913 Sarcopterygii DUPLICATION Sarcopterygii DUPLICATION Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183007.b.i.b #22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183007.b.i.b #22 Amniota ANCESTRAL SPECIES ENSGT00950000183007.b.i.b #22 Sauria DUPLICATION Sauria DUPLICATION Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a #22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a #22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a #22 Testudinoidea DUPLICATION Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.b.b #22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.b.b #22 painted turtle MODERN SPECIES 1189 ENSCPBG00000021943 ##22 ENSCPBG00000021942 ##22 ENSCPBG00000021939 ##22 ENSCPBG00000021938 #22 ENSCPBG00000021937 ##22 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 136 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.c ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001369 ENSCABG00000001372 ENSCABG00000001374 ENSCABG00000001378 ENSCABG00000001379 ENSCABG00000001381 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005015943 HAS1 (ENSGEVG00005015993) ENSGEVG00005016154 ENSGEVG00005016180 ENSGEVG00005016204 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016256 SMG9 (ENSGEVG00005016301) ENSGEVG00005016557 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016734 ##22 ENSGEVG00005016796 ENSGEVG00005016818 ENSGEVG00005016881 ENSGEVG00005016912 ENSGEVG00005016942 ENSGEVG00005016958 ENSGEVG00005016973 ##22 ENSGEVG00005016995 ENSGEVG00005017031 ENSGEVG00005017046 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017101 Emydidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 painted turtle MODERN SPECIES 1482 ENSCPBG00000016826 ##22 ENSCPBG00000016822 ##22 ENSCPBG00000016821 ##22 ENSCPBG00000016818 ##22 Testudinoidea ANCESTRAL SPECIES 136 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a ENSGT01020000230438.B.b.b.a.j.c.b.b.b.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.c ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001362 ENSCABG00000001365 ENSCABG00000001369 ENSCABG00000001372 ENSCABG00000001374 ENSCABG00000001378 ENSCABG00000001379 ENSCABG00000001381 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005015678 ENSGEVG00005015697 ENSGEVG00005015724 ENSGEVG00005015737 ENSGEVG00005015786 ENSGEVG00005015929 ENSGEVG00005015943 HAS1 (ENSGEVG00005015993) ENSGEVG00005016154 ENSGEVG00005016180 ENSGEVG00005016204 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016256 SMG9 (ENSGEVG00005016301) ENSGEVG00005016557 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016734 ##22 ENSGEVG00005016796 ENSGEVG00005016818 ENSGEVG00005016881 ENSGEVG00005016912 ENSGEVG00005016942 ENSGEVG00005016958 Emydidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 painted turtle DUPLICATION painted turtle MODERN SPECIES 1482 ENSCPBG00000016826 ##22 ENSCPBG00000016822 ##22 ENSCPBG00000016821 ##22 ENSCPBG00000016818 ##22 painted turtle MODERN SPECIES 2200 ENSCPBG00000006148 ##22 Testudinoidea DUPLICATION Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.a.a ##22 Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.a.a.a ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 painted turtle MODERN SPECIES 1189 ENSCPBG00000021943 ##22 ENSCPBG00000021942 ##22 ENSCPBG00000021939 ##22 ENSCPBG00000021938 #22 ENSCPBG00000021937 ##22 painted turtle MODERN SPECIES 1512 ENSCPBG00000002066 ##22 Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 68 ENSGT00950000183007.b.i.b.b.b.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.a.b.a ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.d.b ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.b Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 ENSTMTG00000015658 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.a.a.b.b ##22 Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 ENSTMTG00000015658 ENSTMTG00000015643 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT00950000183007.b.i.a.a.b.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 ENSGEVG00005016154 HAS1 (ENSGEVG00005015993) ENSGEVG00005015943 ENSGEVG00005015929 ENSGEVG00005015786 ENSGEVG00005015737 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001585 ENSCABG00000001582 ENSCABG00000001580 ENSCABG00000001578 ENSCABG00000001577 ENSCABG00000001576 ##22 ENSCABG00000001575 ##22 ENSCABG00000001573 ##22 ENSCABG00000001572 ##22 ENSCABG00000001570 ##22 ENSCABG00000001569 ##22 ENSCABG00000001567 ##22 ENSCABG00000001564 ##22 ENSCABG00000001563 ##22 ENSCABG00000001555 ##22 ENSCABG00000001553 ##22 SMG9 (ENSCABG00000001502) KCNN4 (ENSCABG00000001487) ENSCABG00000001486 HAS1 (ENSCABG00000001384) ENSCABG00000001382 ENSCABG00000001381 ENSCABG00000001379 ENSCABG00000001378 ENSCABG00000001374 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 painted turtle MODERN SPECIES 1189 ENSCPBG00000021937 ##22 ENSCPBG00000021938 #22 ENSCPBG00000021939 ##22 ENSCPBG00000021942 ##22 ENSCPBG00000021943 ##22 Testudinoidea DUPLICATION Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 136 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 Testudinidae DUPLICATION Testudinidae ANCESTRAL SPECIES 58 ENSGT00950000183007.b.i.a.a.b.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005017110 ENSGEVG00005017101 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017046 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 ENSGEVG00005016154 HAS1 (ENSGEVG00005015993) Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 ENSGEVG00005016154 HAS1 (ENSGEVG00005015993) ENSGEVG00005015943 ENSGEVG00005015929 ENSGEVG00005015786 ENSGEVG00005015737 ENSGEVG00005015724 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001585 ENSCABG00000001582 ENSCABG00000001580 ENSCABG00000001578 ENSCABG00000001577 ENSCABG00000001576 ##22 ENSCABG00000001575 ##22 ENSCABG00000001573 ##22 ENSCABG00000001572 ##22 ENSCABG00000001570 ##22 ENSCABG00000001569 ##22 ENSCABG00000001567 ##22 ENSCABG00000001564 ##22 ENSCABG00000001563 ##22 ENSCABG00000001555 ##22 ENSCABG00000001553 ##22 SMG9 (ENSCABG00000001502) KCNN4 (ENSCABG00000001487) ENSCABG00000001486 HAS1 (ENSCABG00000001384) ENSCABG00000001382 ENSCABG00000001381 ENSCABG00000001379 ENSCABG00000001378 ENSCABG00000001374 ENSCABG00000001372 Testudinidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.b.a.a.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001585 ENSCABG00000001582 ENSCABG00000001580 ENSCABG00000001578 ENSCABG00000001577 ENSCABG00000001576 ##22 ENSCABG00000001575 ##22 ENSCABG00000001573 ##22 ENSCABG00000001572 ##22 ENSCABG00000001570 ##22 ENSCABG00000001569 ##22 ENSCABG00000001567 ##22 ENSCABG00000001564 ##22 ENSCABG00000001563 ##22 ENSCABG00000001555 ##22 ENSCABG00000001553 ##22 SMG9 (ENSCABG00000001502) KCNN4 (ENSCABG00000001487) ENSCABG00000001486 HAS1 (ENSCABG00000001384) ENSCABG00000001382 ENSCABG00000001381 ENSCABG00000001379 ENSCABG00000001378 ENSCABG00000001374 ENSCABG00000001372 ENSCABG00000001369 ENSCABG00000001365 Emydidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 ENSTMTG00000015658 ENSTMTG00000015643 ENSTMTG00000015631 ENSTMTG00000015616 ENSTMTG00000015607 painted turtle MODERN SPECIES 1482 ENSCPBG00000016818 ##22 ENSCPBG00000016821 ##22 ENSCPBG00000016822 ##22 ENSCPBG00000016826 ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.b.a.b ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.b.a.b ##22 painted turtle MODERN SPECIES 1870 ENSCPBG00000010054 ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.b.b ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.a.a.b.b ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b ##22 Archelosauria DUPLICATION Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.a ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.a ##22 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 383 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 Testudinidae ANCESTRAL SPECIES 350 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 Abingdon island giant tortoise MODERN SPECIES 1880 ENSCABG00000023057 ENSCABG00000023056 ##22 ENSCABG00000023055 ##22 ENSCABG00000023054 ##22 CTU1 (ENSCABG00000023053) ENSCABG00000023052 ENSCABG00000023051 ENSCABG00000023050 ENSCABG00000023049 ENSCABG00000023048 MAG (ENSCABG00000023047) LSR (ENSCABG00000023046) GAPDHS (ENSCABG00000023045) TMEM147 (ENSCABG00000023044) ATP4A (ENSCABG00000023043) ENSCABG00000023042 ENSCABG00000023041 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005015786 ENSGEVG00005015929 ENSGEVG00005015943 HAS1 (ENSGEVG00005015993) ENSGEVG00005016154 ENSGEVG00005016180 ENSGEVG00005016204 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016256 SMG9 (ENSGEVG00005016301) ENSGEVG00005016557 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016734 ##22 ENSGEVG00005016796 ENSGEVG00005016818 ENSGEVG00005016881 ENSGEVG00005016912 ENSGEVG00005016942 ENSGEVG00005016958 ENSGEVG00005016973 ##22 ENSGEVG00005016995 ENSGEVG00005017031 ENSGEVG00005017046 Emydidae ANCESTRAL SPECIES 446 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 painted turtle MODERN SPECIES 1367 ENSCPBG00000006686 ##22 ENSCPBG00000006680 ##22 ENSCPBG00000006671 ##22 ENSCPBG00000006664 ##22 Testudinoidea ANCESTRAL SPECIES 383 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 Emydidae ANCESTRAL SPECIES 446 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 painted turtle MODERN SPECIES 1367 ENSCPBG00000006686 ##22 ENSCPBG00000006680 ##22 ENSCPBG00000006671 ##22 ENSCPBG00000006664 ##22 Testudinidae ANCESTRAL SPECIES 350 ENSGT00950000183007.b.i.b.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.b.a.b ##22 Abingdon island giant tortoise MODERN SPECIES 1880 ENSCABG00000023057 ENSCABG00000023056 ##22 ENSCABG00000023055 ##22 ENSCABG00000023054 ##22 CTU1 (ENSCABG00000023053) ENSCABG00000023052 ENSCABG00000023051 ENSCABG00000023050 ENSCABG00000023049 ENSCABG00000023048 MAG (ENSCABG00000023047) LSR (ENSCABG00000023046) GAPDHS (ENSCABG00000023045) TMEM147 (ENSCABG00000023044) ATP4A (ENSCABG00000023043) ENSCABG00000023042 ENSCABG00000023041 ENSCABG00000023040 Archosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.a ##22 Australian saltwater crocodile MODERN SPECIES 60 ENSCPRG00005011396 MAP4K3 (ENSCPRG00005011349) ENSCPRG00005011329 SOS1 (ENSCPRG00005011321) ARHGEF33 (ENSCPRG00005011270) MORN2 (ENSCPRG00005011260) DHX57 (ENSCPRG00005011246) ENSCPRG00005011241 GEMIN6 (ENSCPRG00005011238) ENSCPRG00005011225 GALM (ENSCPRG00005011218) HNRNPLL (ENSCPRG00005011215) SLC8A1 (ENSCPRG00005011210) MRPS5 (ENSCPRG00005011193) MAL (ENSCPRG00005011171) ENSCPRG00005011164 ##22 EIF4A3 (ENSCPRG00005011154) NINL (ENSCPRG00005011133) GINS1 (ENSCPRG00005011130) ABHD12 (ENSCPRG00005011125) PYGB (ENSCPRG00005009386) ENSCPRG00005009186 ENSCPRG00005009181 TTBK1 (ENSCPRG00005009150) ENSCPRG00005008992 SRF (ENSCPRG00005008915) PTK7 (ENSCPRG00005008882) ENSCPRG00005008848 MRPL2 (ENSCPRG00005008844) ENSCPRG00005008838 ENSCPRG00005008801 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b ##22 Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a ##22 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.a ##22 Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.a.a ##22 painted turtle DUPLICATION painted turtle MODERN SPECIES 2285 ENSCPBG00000017286 ##22 painted turtle MODERN SPECIES 1719 ENSCPBG00000002666 ##22 Three-toed box turtle MODERN SPECIES 180 ENSTMTG00000018996 ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.a.b ##22 painted turtle MODERN SPECIES 1927 ENSCPBG00000011454 ##22 Testudinidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.a ##22 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 122 ATP4A (ENSGEVG00005013696) TMEM147 (ENSGEVG00005013656) GAPDHS (ENSGEVG00005013607) LSR (ENSGEVG00005013475) MAG (ENSGEVG00005012792) ENSGEVG00005012658 ENSGEVG00005012572 TYROBP (ENSGEVG00005012543) ENSGEVG00005012514 CTU1 (ENSGEVG00005012497) ENSGEVG00005020225 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020185 ##22 ENSGEVG00005020167 ENSGEVG00005020163 ##22 ENSGEVG00005020158 ##22 ENSGEVG00005020155 ENSGEVG00005020150 ##22 ENSGEVG00005020146 ENSGEVG00005020138 ENSGEVG00005020131 ENSGEVG00005020100 ENSGEVG00005020084 ENSGEVG00005020047 ENSGEVG00005020027 ENSGEVG00005019919 ENSGEVG00005019833 ENSGEVG00005019708 ENSGEVG00005019687 ENSGEVG00005019374 ENSGEVG00005019185 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005019833 ENSGEVG00005019919 ENSGEVG00005020027 ENSGEVG00005020047 ENSGEVG00005020084 ENSGEVG00005020100 ENSGEVG00005020131 ENSGEVG00005020138 ENSGEVG00005020146 ENSGEVG00005020150 ##22 ENSGEVG00005020155 ENSGEVG00005020158 ##22 ENSGEVG00005020163 ##22 ENSGEVG00005020167 ENSGEVG00005020185 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020225 ##22 CTU1 (ENSGEVG00005012497) ENSGEVG00005012514 TYROBP (ENSGEVG00005012543) ENSGEVG00005012572 ENSGEVG00005012658 MAG (ENSGEVG00005012792) LSR (ENSGEVG00005013475) GAPDHS (ENSGEVG00005013607) TMEM147 (ENSGEVG00005013656) ATP4A (ENSGEVG00005013696) ENSGEVG00005013999 ENSGEVG00005014017 ENSGEVG00005014078 USF2 (ENSGEVG00005014152) Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.b ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.a.b ##22 Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 ENSTMTG00000015658 ENSTMTG00000015643 ENSTMTG00000015631 painted turtle MODERN SPECIES 1189 ENSCPBG00000021943 ##22 ENSCPBG00000021942 ##22 ENSCPBG00000021939 ##22 ENSCPBG00000021938 #22 ENSCPBG00000021937 ##22 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 237 ENSPSIG00000009029 ##22 ENSPSIG00000000001 ##22 ENSPSIG00000008699 ##22 ENSPSIG00000001637 ##22 ENSPSIG00000008492 ##22 SMG9 (ENSPSIG00000008334) ENSPSIG00000008294 ENSPSIG00000008071 ENSPSIG00000008050 ENSPSIG00000001629 HAS1 (ENSPSIG00000006966) ENSPSIG00000006663 Chinese turtle MODERN SPECIES 237 ENSPSIG00000006663 HAS1 (ENSPSIG00000006966) ENSPSIG00000001629 ENSPSIG00000008050 ENSPSIG00000008071 ENSPSIG00000008294 SMG9 (ENSPSIG00000008334) ENSPSIG00000008492 ##22 ENSPSIG00000001637 ##22 ENSPSIG00000008699 ##22 ENSPSIG00000000001 ##22 ENSPSIG00000009029 ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.b ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.b ##22 Testudinidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b.b.b ##22 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005014078 ENSGEVG00005014017 ENSGEVG00005013999 ATP4A (ENSGEVG00005013696) TMEM147 (ENSGEVG00005013656) GAPDHS (ENSGEVG00005013607) LSR (ENSGEVG00005013475) MAG (ENSGEVG00005012792) ENSGEVG00005012658 ENSGEVG00005012572 TYROBP (ENSGEVG00005012543) ENSGEVG00005012514 CTU1 (ENSGEVG00005012497) ENSGEVG00005020225 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020185 ##22 ENSGEVG00005020167 ENSGEVG00005020163 ##22 ENSGEVG00005020158 ##22 ENSGEVG00005020155 ENSGEVG00005020150 ##22 ENSGEVG00005020146 ENSGEVG00005020138 ENSGEVG00005020131 ENSGEVG00005020100 ENSGEVG00005020084 ENSGEVG00005020047 ENSGEVG00005020027 ENSGEVG00005019919 ENSGEVG00005019833 ENSGEVG00005019708 Lepidosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.a.b ##22 tuatara DUPLICATION tuatara MODERN SPECIES 1580 RABAC1 (ENSSPUG00000016746) ATP1A3 (ENSSPUG00000016698) GRIK5 (ENSSPUG00000016676) POU2F2 (ENSSPUG00000016579) DEDD2 (ENSSPUG00000016572) ZNF526 (ENSSPUG00000016569) GSK3A (ENSSPUG00000016559) ERF (ENSSPUG00000016555) ENSSPUG00000016548 ENSSPUG00000016538 PAFAH1B3 (ENSSPUG00000016531) ENSSPUG00000016520 ENSSPUG00000016510 ENSSPUG00000016498 ENSSPUG00000016293 ENSSPUG00000016251 ##22 ENSSPUG00000016105 RPS19 (ENSSPUG00000016051) CADM4 (ENSSPUG00000015976) ENSSPUG00000015950 ZNF576 (ENSSPUG00000015942) ENSSPUG00000015934 ##22 ENSSPUG00000015920 ##22 tuatara MODERN SPECIES 50 ETFB (ENSSPUG00000016350) ENSSPUG00000016344 ENSSPUG00000016337 ENSSPUG00000016331 ENSSPUG00000016320 ENSSPUG00000016311 ENSSPUG00000016307 PPP2R1A (ENSSPUG00000016300) ENSSPUG00000016290 ENSSPUG00000016285 ENSSPUG00000016274 ENSSPUG00000016264 KCNN4 (ENSSPUG00000016247) SMG9 (ENSSPUG00000016223) ENSSPUG00000016218 ENSSPUG00000016215 ##22 ENSSPUG00000016212 ##22 ENSSPUG00000016207 ENSSPUG00000016190 ENSSPUG00000016179 ENSSPUG00000016175 ENSSPUG00000016168 ENSSPUG00000016161 ENSSPUG00000016155 ETHE1 (ENSSPUG00000015962) XRCC1 (ENSSPUG00000015888) Sauria DUPLICATION Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a ##22 Archosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a ##22 Australian saltwater crocodile MODERN SPECIES 31 ENSCPRG00005002454 TUBGCP4 (ENSCPRG00005002219) TP53BP1 (ENSCPRG00005002173) MAP1A (ENSCPRG00005002156) RASGRF1 (ENSCPRG00005002119) CTSH (ENSCPRG00005002111) BLM (ENSCPRG00005002099) WDR76 (ENSCPRG00005002087) FRMD5 (ENSCPRG00005002067) GOLM2 (ENSCPRG00005001960) CTDSPL2 (ENSCPRG00005001948) EIF3J (ENSCPRG00005001932) SPG11 (ENSCPRG00005001714) CIAO2A (ENSCPRG00005001696) ADAMTS7 (ENSCPRG00005001232) ENSCPRG00005001186 ##22 ENSCPRG00005001169 UACA (ENSCPRG00005001122) TLE3 (ENSCPRG00005001068) ENSCPRG00005001006 ENSCPRG00005000997 ENSCPRG00005000993 GLCE (ENSCPRG00005000985) ENSCPRG00005000980 NOX5 (ENSCPRG00005000970) ENSCPRG00005000961 ENSCPRG00005000951 CORO2B (ENSCPRG00005000933) ITGA11 (ENSCPRG00005000885) ENSCPRG00005000881 CLN6 (ENSCPRG00005000877) Aves ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a ##22 African ostrich MODERN SPECIES 924 POLR2B (ENSSCUG00000016970) REST (ENSSCUG00000016974) SARAF (ENSSCUG00000016976) LEPROTL1 (ENSSCUG00000016977) SRP72 (ENSSCUG00000016978) ARL9 (ENSSCUG00000016979) THEGL (ENSSCUG00000016981) ENSSCUG00000016982 DUSP4 (ENSSCUG00000016987) TNKS (ENSSCUG00000016990) MFHAS1 (ENSSCUG00000017011) ERI1 (ENSSCUG00000017012) PPP1R3B (ENSSCUG00000017014) PRAG1 (ENSSCUG00000017015) MBOAT4 (ENSSCUG00000017017) ENSSCUG00000017018 ##22 ADGRL3 (ENSSCUG00000017032) TECRL (ENSSCUG00000017069) Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a ##22 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a.a ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a.a ##22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2401 ENSTMTG00000011541 ##22 Three-toed box turtle MODERN SPECIES 1798 ENSTMTG00000008917 ##22 ENSTMTG00000008922 ##22 painted turtle MODERN SPECIES 1993 ENSCPBG00000002577 ##22 Testudinidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.a.a ##22 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005019374 ENSGEVG00005019687 ENSGEVG00005019708 ENSGEVG00005019833 ENSGEVG00005019919 ENSGEVG00005020027 ENSGEVG00005020047 ENSGEVG00005020084 ENSGEVG00005020100 ENSGEVG00005020131 ENSGEVG00005020138 ENSGEVG00005020146 ENSGEVG00005020150 ##22 ENSGEVG00005020155 ENSGEVG00005020158 ##22 ENSGEVG00005020163 ##22 ENSGEVG00005020167 ENSGEVG00005020185 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020225 ##22 CTU1 (ENSGEVG00005012497) ENSGEVG00005012514 TYROBP (ENSGEVG00005012543) ENSGEVG00005012572 ENSGEVG00005012658 MAG (ENSGEVG00005012792) LSR (ENSGEVG00005013475) GAPDHS (ENSGEVG00005013607) TMEM147 (ENSGEVG00005013656) ATP4A (ENSGEVG00005013696) ENSGEVG00005013999 Goode s thornscrub tortoise MODERN SPECIES 122 DYRK1B (ENSGEVG00005019073) ENSGEVG00005019097 ENSGEVG00005019185 ENSGEVG00005019374 ENSGEVG00005019687 ENSGEVG00005019708 ENSGEVG00005019833 ENSGEVG00005019919 ENSGEVG00005020027 ENSGEVG00005020047 ENSGEVG00005020084 ENSGEVG00005020100 ENSGEVG00005020131 ENSGEVG00005020138 ENSGEVG00005020146 ENSGEVG00005020150 ##22 ENSGEVG00005020155 ENSGEVG00005020158 ##22 ENSGEVG00005020163 ##22 ENSGEVG00005020167 ENSGEVG00005020185 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020225 ##22 CTU1 (ENSGEVG00005012497) ENSGEVG00005012514 TYROBP (ENSGEVG00005012543) ENSGEVG00005012572 ENSGEVG00005012658 MAG (ENSGEVG00005012792) LSR (ENSGEVG00005013475) GAPDHS (ENSGEVG00005013607) Testudinoidea ANCESTRAL SPECIES 139 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Emydidae ANCESTRAL SPECIES 448 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021461 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021468 ##22 ENSCPBG00000021469 ENSCPBG00000021470 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021473 ##22 ENSCPBG00000021475 Testudinidae ANCESTRAL SPECIES 58 ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.c ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001379 ENSCABG00000001381 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b.a ##22 Testudinoidea ANCESTRAL SPECIES 136 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT01020000230438.B.b.b.a.j.c.b.b.b.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.c ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005015929 ENSGEVG00005015943 HAS1 (ENSGEVG00005015993) ENSGEVG00005016154 ENSGEVG00005016180 ENSGEVG00005016204 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016256 SMG9 (ENSGEVG00005016301) ENSGEVG00005016557 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016734 ##22 ENSGEVG00005016796 ENSGEVG00005016818 ENSGEVG00005016881 ENSGEVG00005016912 ENSGEVG00005016942 ENSGEVG00005016958 ENSGEVG00005016973 ##22 ENSGEVG00005016995 ENSGEVG00005017031 ENSGEVG00005017046 LYPD3 (ENSGEVG00005017069) Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005015697 ENSGEVG00005015724 ENSGEVG00005015737 ENSGEVG00005015786 ENSGEVG00005015929 ENSGEVG00005015943 HAS1 (ENSGEVG00005015993) ENSGEVG00005016154 ENSGEVG00005016180 ENSGEVG00005016204 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016256 SMG9 (ENSGEVG00005016301) ENSGEVG00005016557 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016734 ##22 ENSGEVG00005016796 ENSGEVG00005016818 ENSGEVG00005016881 ENSGEVG00005016912 ENSGEVG00005016942 ENSGEVG00005016958 ENSGEVG00005016973 ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001358 ENSCABG00000001362 ENSCABG00000001365 ENSCABG00000001369 ENSCABG00000001372 ENSCABG00000001374 ENSCABG00000001378 ENSCABG00000001379 ENSCABG00000001381 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Emydidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a ##22 Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 ENSTMTG00000015658 ENSTMTG00000015643 ENSTMTG00000015631 ENSTMTG00000015616 painted turtle DUPLICATION painted turtle MODERN SPECIES 1482 ENSCPBG00000016826 ##22 ENSCPBG00000016822 ##22 ENSCPBG00000016821 ##22 ENSCPBG00000016818 ##22 painted turtle MODERN SPECIES 2358 ENSCPBG00000001007 ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b.b ##22 Testudinoidea ANCESTRAL SPECIES 139 ENSGT00950000183007.b.i.a.a.b.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 Emydidae DUPLICATION Emydidae DUPLICATION Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 68 ENSGT00950000183007.b.i.b.b.b.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.a.b.a ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.d.b ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000004253 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000003709 ##22 ENSTMTG00000003652 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003441 ENSTMTG00000003423 ENSTMTG00000015739 ENSTMTG00000015734 ENSTMTG00000015714 ENSTMTG00000015675 ENSTMTG00000015668 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b.b.a.a.b ##22 painted turtle DUPLICATION painted turtle MODERN SPECIES 1189 ENSCPBG00000021937 ##22 ENSCPBG00000021938 #22 ENSCPBG00000021939 ##22 ENSCPBG00000021942 ##22 ENSCPBG00000021943 ##22 painted turtle MODERN SPECIES 2328 ENSCPBG00000000576 ##22 Three-toed box turtle MODERN SPECIES 367 ENSTMTG00000015593 ENSTMTG00000015607 ENSTMTG00000015616 ENSTMTG00000015631 ENSTMTG00000015643 ENSTMTG00000015658 ENSTMTG00000015668 ENSTMTG00000015675 ENSTMTG00000015714 ENSTMTG00000015734 ENSTMTG00000015739 ENSTMTG00000003423 ENSTMTG00000003441 KCNN4 (ENSTMTG00000003493) ENSTMTG00000003652 ENSTMTG00000003709 ##22 ENSTMTG00000004053 ##22 ENSTMTG00000004184 ##22 ENSTMTG00000004212 ##22 ENSTMTG00000004228 ##22 ENSTMTG00000004240 ##22 ENSTMTG00000004253 ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b.b.a.b ##22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1719 ENSTMTG00000016672 ENSTMTG00000016663 ENSTMTG00000016651 ##22 Three-toed box turtle MODERN SPECIES 1762 ENSTMTG00000008398 ENSTMTG00000008378 ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b.b.b ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT00950000183007.b.i.a.a.b.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001585 ENSCABG00000001582 ENSCABG00000001580 ENSCABG00000001578 ENSCABG00000001577 ENSCABG00000001576 ##22 ENSCABG00000001575 ##22 ENSCABG00000001573 ##22 ENSCABG00000001572 ##22 ENSCABG00000001570 ##22 ENSCABG00000001569 ##22 ENSCABG00000001567 ##22 ENSCABG00000001564 ##22 ENSCABG00000001563 ##22 ENSCABG00000001555 ##22 ENSCABG00000001553 ##22 SMG9 (ENSCABG00000001502) KCNN4 (ENSCABG00000001487) ENSCABG00000001486 HAS1 (ENSCABG00000001384) ENSCABG00000001382 ENSCABG00000001381 ENSCABG00000001379 ENSCABG00000001378 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 237 ENSPSIG00000009029 ##22 ENSPSIG00000000001 ##22 ENSPSIG00000008699 ##22 ENSPSIG00000001637 ##22 ENSPSIG00000008492 ##22 SMG9 (ENSPSIG00000008334) ENSPSIG00000008294 ENSPSIG00000008071 ENSPSIG00000008050 ENSPSIG00000001629 HAS1 (ENSPSIG00000006966) ENSPSIG00000006663 Chinese turtle MODERN SPECIES 237 ENSPSIG00000009029 ##22 ENSPSIG00000000001 ##22 ENSPSIG00000008699 ##22 ENSPSIG00000001637 ##22 ENSPSIG00000008492 ##22 SMG9 (ENSPSIG00000008334) ENSPSIG00000008294 ENSPSIG00000008071 ENSPSIG00000008050 ENSPSIG00000001629 HAS1 (ENSPSIG00000006966) ENSPSIG00000006663 Lepidosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Episquamata ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Laterata ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 16 ENSPMRG00000007588 ENSPMRG00000007583 ENSPMRG00000007577 ENSPMRG00000007572 ENSPMRG00000007565 ENSPMRG00000007549 ENSPMRG00000007545 ENSPMRG00000007536 HAS1 (ENSPMRG00000007524) ENSPMRG00000007510 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007487 SMG9 (ENSPMRG00000007471) ENSPMRG00000007462 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007373 ##22 ENSPMRG00000007360 ENSPMRG00000007351 ##22 ENSPMRG00000007347 ENSPMRG00000007338 ENSPMRG00000007333 Common wall lizard MODERN SPECIES 16 ENSPMRG00000007572 ENSPMRG00000007565 ENSPMRG00000007549 ENSPMRG00000007545 ENSPMRG00000007536 HAS1 (ENSPMRG00000007524) ENSPMRG00000007510 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007487 SMG9 (ENSPMRG00000007471) ENSPMRG00000007462 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007373 ##22 ENSPMRG00000007360 ENSPMRG00000007351 ##22 ENSPMRG00000007347 ENSPMRG00000007338 ENSPMRG00000007333 ENSPMRG00000007321 ENSPMRG00000009253 ENSPMRG00000009245 Toxicofera ANCESTRAL SPECIES ENSGT00950000183007.b.i.b.b.b ##22 Lizard DUPLICATION Lizard MODERN SPECIES 805 ENSACAG00000004522 ENSACAG00000043868 SMG9 (ENSACAG00000004462) ENSACAG00000040604 ENSACAG00000004461 ##22 ENSACAG00000035181 ##22 ENSACAG00000037309 ##22 ENSACAG00000036617 ##22 ENSACAG00000029510 ENSACAG00000028902 ENSACAG00000035908 ENSACAG00000004441 ENSACAG00000004436 ENSACAG00000004433 ENSACAG00000038431 ENSACAG00000040345 ENSACAG00000044918 ENSACAG00000004431 ENSACAG00000004429 ENSACAG00000004426 ENSACAG00000039812 ##22 ENSACAG00000028324 Lizard MODERN SPECIES 577 ENSACAG00000027740 ##22 Sarcopterygii DUPLICATION Sarcopterygii ANCESTRAL SPECIES 197 ENSGT01100000263573.a.a.a ENSGT01100000263535.b.a.b ENSGT00940000163304 ENSGT00950000183007.b.i.a.a ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT01020000230438.B.b.b.a ENSGT00940000155772.a.b ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.a ENSGT00950000182929.B.b ENSGT00390000011584 ENSGT00390000007913 ENSGT01050000244848.B.b Tetrapoda ANCESTRAL SPECIES 68 ENSGT01020000230438.B.a.a ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A.a.a ENSGT01020000230438.B.b.b.a ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT00940000160467 ENSGT00390000009936 ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01100000263573.a.a.a ENSGT01100000263535.b.a.b ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 ENSGT00940000160704.b ENSGT00990000203527.a.b ENSGT00990000203527.a.a.a.a ENSGT00990000203527.a.a.a.b ENSGT00990000203527.b ENSGT01100000263571 ENSGT01100000263535.a.b ENSGT00530000063991.b ENSGT00950000183058.B ENSGT00940000164072 ENSGT00390000018560.a.b ENSGT00940000161007 ENSGT01020000230346.D ENSGT00950000183155.a.b.b.k ENSGT00940000153695.C Amniota ANCESTRAL SPECIES 219 ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 Sauria ANCESTRAL SPECIES 302 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 Archelosauria ANCESTRAL SPECIES 269 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 Cryptodira ANCESTRAL SPECIES 297 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES 294 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a.a ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.a.a ##22 Three-toed box turtle MODERN SPECIES 645 ENSTMTG00000010969 ##22 Testudinidae ANCESTRAL SPECIES 164 ENSGT00940000164395.c.a ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a.a ##22 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005017155 ENSGEVG00005017130 ENSGEVG00005017110 ENSGEVG00005017101 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017046 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 Testudinoidea DUPLICATION Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.a.b.a ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.a.b.a ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021475 ENSCPBG00000021473 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021470 ##22 ENSCPBG00000021469 ENSCPBG00000021468 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021461 ##22 Testudinidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.a.b.a ##22 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005017130 ENSGEVG00005017110 ENSGEVG00005017101 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017046 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 ENSGEVG00005016154 Testudinoidea ANCESTRAL SPECIES 139 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.a.b.b ##22 Three-toed box turtle MODERN SPECIES 2392 ENSTMTG00000011211 ##22 painted turtle MODERN SPECIES 1181 ENSCPBG00000021461 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021468 ##22 ENSCPBG00000021469 ENSCPBG00000021470 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021473 ##22 ENSCPBG00000021475 Testudinidae ANCESTRAL SPECIES 58 ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Sarcopterygii ANCESTRAL SPECIES 855 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.a.a.b ##22 ENSGT00950000183007.b.i.a.b ##22 Coelacanth MODERN SPECIES 2377 ENSLACG00000003292 ENSLACG00000022119 ENSLACG00000022222 ENSLACG00000006215 ##22 xrcc1 (ENSLACG00000006378) drd2l (ENSLACG00000007291) MSANTD3 (ENSLACG00000007729) ENSLACG00000008243 ethe1 (ENSLACG00000008551) Tetrapoda ANCESTRAL SPECIES 631 ENSGT00950000183007.a.a.b ##22 ENSGT00950000183007.b.i.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Theria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Murinae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Mus ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Mus_A ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Ryukyu mouse MODERN SPECIES 9 Marchf3 (MGP_CAROLIEiJ_G0022289) C330018D20Rik (MGP_CAROLIEiJ_G0022290) Megf10 (MGP_CAROLIEiJ_G0022291) Prrc1 (MGP_CAROLIEiJ_G0022292) Ctxn3 (MGP_CAROLIEiJ_G0022293) MGP_CAROLIEiJ_G0022294 Slc12a2 (MGP_CAROLIEiJ_G0022295) Fbn2 (MGP_CAROLIEiJ_G0022296) Slc27a6 (MGP_CAROLIEiJ_G0022297) Isoc1 (MGP_CAROLIEiJ_G0022298) Adamts19 (MGP_CAROLIEiJ_G0022299) Minar2 (MGP_CAROLIEiJ_G0022300) Chsy3 (MGP_CAROLIEiJ_G0022301) Gm4951 (MGP_CAROLIEiJ_G0022302) ##22 Iigp1 (MGP_CAROLIEiJ_G0022303) ##22 MGP_CAROLIEiJ_G0022304 ##22 Smim3 (MGP_CAROLIEiJ_G0022305) Dctn4 (MGP_CAROLIEiJ_G0022306) Rbm22 (MGP_CAROLIEiJ_G0022307) Myoz3 (MGP_CAROLIEiJ_G0022308) Synpo (MGP_CAROLIEiJ_G0022309) Ndst1 (MGP_CAROLIEiJ_G0022310) Rps14 (MGP_CAROLIEiJ_G0022311) Cd74 (MGP_CAROLIEiJ_G0022312) Tcof1 (MGP_CAROLIEiJ_G0022313) Arsi (MGP_CAROLIEiJ_G0022314) Camk2a (MGP_CAROLIEiJ_G0022315) Slc6a7 (MGP_CAROLIEiJ_G0022316) Cdx1 (MGP_CAROLIEiJ_G0022317) Pdgfrb (MGP_CAROLIEiJ_G0022318) Csf1r (MGP_CAROLIEiJ_G0022319) Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 painted turtle DUPLICATION painted turtle DUPLICATION painted turtle MODERN SPECIES 1367 ENSCPBG00000006664 ##22 ENSCPBG00000006671 ##22 ENSCPBG00000006680 ##22 ENSCPBG00000006686 ##22 painted turtle MODERN SPECIES 1713 ENSCPBG00000014548 ##22 painted turtle MODERN SPECIES 1367 ENSCPBG00000006686 ##22 ENSCPBG00000006680 ##22 ENSCPBG00000006671 ##22 ENSCPBG00000006664 ##22 Three-toed box turtle MODERN SPECIES 1798 ENSTMTG00000008917 ##22 ENSTMTG00000008922 ##22 Testudinidae ANCESTRAL SPECIES 65 ENSGT00550000074792.b ENSGT00940000160345 ENSGT01020000230389.b.a.b.d.b.b.a.a.a ENSGT01050000244971.C.c.a.a.b.a.a ENSGT01050000244971.C.c.a.a.b.b.a ENSGT01050000244971.C.c.a.a.a.a.b.a.a ENSGT01050000244971.C.c.a.a.a.a.b.b ENSGT01050000244971.C.c.a.a.a.a.a ENSGT01050000244971.C.c.a.a.a.b ENSGT01020000230389.b.a.b.d.b.b.a.b.a ENSGT01050000244971.C.c.a.a.b.a.b.a ENSGT01020000230389.b.a.b.d.b.b.b.b ENSGT01050000244971.C.c.a.b ENSGT01030000234637.a.b.e ENSGT01030000234669.L.a.a.b.b.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00390000001041 ENSGT00940000164072 ENSGT00980000200662 ENSGT01100000263571 ENSGT00950000185089 ENSGT01100000263535.a.b ENSGT00950000183058.B ENSGT00940000160272 ENSGT00390000013276 ENSGT00940000160297 ENSGT00990000203527.b ENSGT00990000203527.a.a.a.a.d.b Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1880 ENSCABG00000023057 ENSCABG00000023056 ##22 ENSCABG00000023055 ##22 ENSCABG00000023054 ##22 CTU1 (ENSCABG00000023053) ENSCABG00000023052 ENSCABG00000023051 ENSCABG00000023050 ENSCABG00000023049 ENSCABG00000023048 MAG (ENSCABG00000023047) LSR (ENSCABG00000023046) GAPDHS (ENSCABG00000023045) TMEM147 (ENSCABG00000023044) ATP4A (ENSCABG00000023043) ENSCABG00000023042 ENSCABG00000023041 ENSCABG00000023040 ENSCABG00000023039 Abingdon island giant tortoise MODERN SPECIES 998 ENSCABG00000014936 ENSCABG00000014931 ENSCABG00000014930 ENSCABG00000014929 ##22 ENSCABG00000014928 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005019919 ENSGEVG00005020027 ENSGEVG00005020047 ENSGEVG00005020084 ENSGEVG00005020100 ENSGEVG00005020131 ENSGEVG00005020138 ENSGEVG00005020146 ENSGEVG00005020150 ##22 ENSGEVG00005020155 ENSGEVG00005020158 ##22 ENSGEVG00005020163 ##22 ENSGEVG00005020167 ENSGEVG00005020185 ##22 ENSGEVG00005020223 ##22 ENSGEVG00005020225 ##22 CTU1 (ENSGEVG00005012497) ENSGEVG00005012514 TYROBP (ENSGEVG00005012543) ENSGEVG00005012572 ENSGEVG00005012658 MAG (ENSGEVG00005012792) LSR (ENSGEVG00005013475) GAPDHS (ENSGEVG00005013607) TMEM147 (ENSGEVG00005013656) ATP4A (ENSGEVG00005013696) ENSGEVG00005013999 ENSGEVG00005014017 ENSGEVG00005014078 USF2 (ENSGEVG00005014152) ENSGEVG00005014179 Lepidosauria ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b ##22 Episquamata ANCESTRAL SPECIES 7 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT01030000234540.B.b.a.b ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.b.b.a.j.a.b ENSGT01020000230438.A.a.a.b ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a Laterata DUPLICATION Laterata ANCESTRAL SPECIES 61 ENSGT00640000091486.a ENSGT00390000018613.b ENSGT00940000164681 ENSGT00390000011180 ENSGT00390000007071 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272 ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000159186 ENSGT00950000183007.b.i.a.b.e ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757.kb ENSGT00940000158522 ENSGT00940000165856 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164158.A ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 16 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 ENSPMRG00000007565 Common wall lizard MODERN SPECIES 16 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 ENSPMRG00000007565 ENSPMRG00000007572 ENSPMRG00000007577 ENSPMRG00000007583 ENSPMRG00000007588 ENSPMRG00000007596 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 ENSPMRG00000007565 ENSPMRG00000007572 ENSPMRG00000007577 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009218 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009196 ENSPMRG00000009203 ENSPMRG00000009218 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005545 ENSSMRG00000005530 ENSSMRG00000005529 ##22 ENSSMRG00000005526 ENSSMRG00000005514 ENSSMRG00000005499 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005468 ##22 ENSSMRG00000005457 ENSSMRG00000005434 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005401 ##22 IRGC (ENSSMRG00000005398) ##22 SMG9 (ENSSMRG00000005393) ENSSMRG00000005391 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005388 ENSSMRG00000005381 HAS1 (ENSSMRG00000005371) ENSSMRG00000005370 ENSSMRG00000005359 ENSSMRG00000005358 ENSSMRG00000005357 ENSSMRG00000005350 ENSSMRG00000005349 ENSSMRG00000005348 PPP2R1A (ENSSMRG00000005345) Laterata ANCESTRAL SPECIES ENSGT00950000183007.b.i.a.b.f ##22 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005585 ##22 XRCC1 (ENSSMRG00000005576) ZNF575 (ENSSMRG00000005573) ETHE1 (ENSSMRG00000005572) PHLDB3 (ENSSMRG00000005565) ENSSMRG00000005562 ENSSMRG00000005560 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005545 ENSSMRG00000005530 ENSSMRG00000005529 ##22 ENSSMRG00000005526 ENSSMRG00000005514 ENSSMRG00000005499 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005468 ##22 ENSSMRG00000005457 ENSSMRG00000005434 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005401 ##22 IRGC (ENSSMRG00000005398) ##22 SMG9 (ENSSMRG00000005393) ENSSMRG00000005391 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005388 ENSSMRG00000005381 HAS1 (ENSSMRG00000005371) Toxicofera ANCESTRAL SPECIES 52 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00940000154876.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 Lizard MODERN SPECIES 307 ENSACAG00000006864 ##22 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000160115 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b Elapidae_a ANCESTRAL SPECIES 107 ENSGT00950000183007.b.j.a.a.a.a ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01000000221201 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b Acanthophiinae ANCESTRAL SPECIES 71 ENSGT00950000183007.b.j.a.a.a.a ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01000000221201 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b Mainland tiger snake MODERN SPECIES 665 ENSNSUG00000015774 ##22 ENSNSUG00000015775 ##22 SMG9 (ENSNSUG00000015776) ENSNSUG00000015777 ENSNSUG00000015778 Blue-lipped sea krait MODERN SPECIES 2546 ENSLLTG00000014187 ##22 ENSLLTG00000014179 ##22 ENSLLTG00000014175 ##22 SMG9 (ENSLLTG00000014165) ENSLLTG00000014158 KCNN4 (ENSLLTG00000014152) Indian cobra MODERN SPECIES 11 ENSNNAG00000003756 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003728 ENSNNAG00000003711 ENSNNAG00000003701 ##22 ENSNNAG00000003685 ENSNNAG00000003672 ENSNNAG00000003631 ENSNNAG00000003609 ENSNNAG00000003592 ENSNNAG00000017124 ENSNNAG00000017121 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017105 ##22 SMG9 (ENSNNAG00000017093) ENSNNAG00000017076 ENSNNAG00000017070 ENSNNAG00000017062 HAS1 (ENSNNAG00000017046) ENSNNAG00000017037 ENSNNAG00000017034 ENSNNAG00000017027 ENSNNAG00000017022 ENSNNAG00000017017 ENSNNAG00000017010 PPP2R1A (ENSNNAG00000016995) ENSNNAG00000016985 ENSNNAG00000016977 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183007.b.j ##22 Tetrapoda ANCESTRAL SPECIES 630 ENSGT00950000183007.b.j ##22 ENSGT00940000163304.b.b.a Amniota ANCESTRAL SPECIES 408 ENSGT00950000183007.b.j ##22 ENSGT00940000163304.b.b.a Sauria ANCESTRAL SPECIES ENSGT00950000183007.b.j ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00950000183007.b.j ##22 Episquamata DUPLICATION Episquamata ANCESTRAL SPECIES ENSGT00950000183007.b.j.a ##22 Toxicofera ANCESTRAL SPECIES ENSGT00950000183007.b.j.a ##22 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT00950000183007.b.j.a.a.a ##22 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 107 ENSGT00950000183066.a.a.a ENSGT01020000230438.B.a.b ENSGT01000000221201 ENSGT00990000213363 ENSGT01020000230438.B.a.a.cb ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.a ENSGT00390000010337.A.a ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.b.j.a.a.a.a ##22 Acanthophiinae ANCESTRAL SPECIES 71 ENSGT00950000183066.a.a.a ENSGT01020000230438.B.a.b ENSGT01000000221201 ENSGT00990000213363 ENSGT01020000230438.B.a.a.cb ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.a ENSGT00390000010337.A.a ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.b.j.a.a.a.a ##22 Mainland tiger snake MODERN SPECIES 2797 ENSNSUG00000004258 ##22 Eastern brown snake MODERN SPECIES 115 ENSPTXG00000015023 ENSPTXG00000015024 PPP2R1A (ENSPTXG00000015025) ENSPTXG00000015026 ENSPTXG00000015027 ENSPTXG00000015030 ENSPTXG00000015031 ENSPTXG00000015044 HAS1 (ENSPTXG00000015055) ENSPTXG00000015100 ENSPTXG00000015102 ENSPTXG00000015103 SMG9 (ENSPTXG00000015104) ENSPTXG00000015106 ##22 ENSPTXG00000015107 ENSPTXG00000015113 ##22 Blue-lipped sea krait MODERN SPECIES 2546 KCNN4 (ENSLLTG00000014152) ENSLLTG00000014158 SMG9 (ENSLLTG00000014165) ENSLLTG00000014175 ##22 ENSLLTG00000014179 ##22 ENSLLTG00000014187 ##22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183007.b.j.a.a.a.b ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000183007.b.j.a.a.a.b ##22 Mainland tiger snake MODERN SPECIES 2412 ENSNSUG00000000617 ##22 Elapidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.j.a.b ##22 ENSGT00950000183007.b.j.a.a.b ##22 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 232 ENSNNAG00000012383 ##22 ENSNNAG00000012410 ##22 Indian cobra MODERN SPECIES 11 PPP2R1A (ENSNNAG00000016995) ENSNNAG00000017010 ENSNNAG00000017017 ENSNNAG00000017022 ENSNNAG00000017027 ENSNNAG00000017034 ENSNNAG00000017037 HAS1 (ENSNNAG00000017046) ENSNNAG00000017062 ENSNNAG00000017070 ENSNNAG00000017076 SMG9 (ENSNNAG00000017093) ENSNNAG00000017105 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017121 ##22 ENSNNAG00000017124 ENSNNAG00000003592 ENSNNAG00000003609 ENSNNAG00000003631 ENSNNAG00000003672 ENSNNAG00000003685 ENSNNAG00000003701 ##22 ENSNNAG00000003711 ENSNNAG00000003728 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003756 ENSNNAG00000003769 ENSNNAG00000003780 Elapidae_a ANCESTRAL SPECIES 361 ENSGT00950000183007.b.j.a.b ##22 ENSGT00950000183007.b.j.a.a.b ##22 Blue-lipped sea krait MODERN SPECIES 9147 ENSLLTG00000010851 ##22 ENSLLTG00000010837 ##22 Elapidae ANCESTRAL SPECIES 206 ENSGT00950000183007.b.j.a.b ##22 ENSGT00950000183007.b.j.a.a.b ##22 Indian cobra DUPLICATION Indian cobra DUPLICATION Indian cobra MODERN SPECIES 232 ENSNNAG00000012383 ##22 ENSNNAG00000012410 ##22 Indian cobra MODERN SPECIES 11 ENSNNAG00000016985 PPP2R1A (ENSNNAG00000016995) ENSNNAG00000017010 ENSNNAG00000017017 ENSNNAG00000017022 ENSNNAG00000017027 ENSNNAG00000017034 ENSNNAG00000017037 HAS1 (ENSNNAG00000017046) ENSNNAG00000017062 ENSNNAG00000017070 ENSNNAG00000017076 SMG9 (ENSNNAG00000017093) ENSNNAG00000017105 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017121 ##22 ENSNNAG00000017124 ENSNNAG00000003592 ENSNNAG00000003609 ENSNNAG00000003631 ENSNNAG00000003672 ENSNNAG00000003685 ENSNNAG00000003701 ##22 ENSNNAG00000003711 ENSNNAG00000003728 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003756 ENSNNAG00000003769 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 11 ENSNNAG00000017010 ENSNNAG00000017017 ENSNNAG00000017022 ENSNNAG00000017027 ENSNNAG00000017034 ENSNNAG00000017037 HAS1 (ENSNNAG00000017046) ENSNNAG00000017062 ENSNNAG00000017070 ENSNNAG00000017076 SMG9 (ENSNNAG00000017093) ENSNNAG00000017105 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017121 ##22 ENSNNAG00000017124 ENSNNAG00000003592 ENSNNAG00000003609 ENSNNAG00000003631 ENSNNAG00000003672 ENSNNAG00000003685 ENSNNAG00000003701 ##22 ENSNNAG00000003711 ENSNNAG00000003728 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003756 ENSNNAG00000003769 ENSNNAG00000003780 XRCC1 (ENSNNAG00000003829) Indian cobra MODERN SPECIES 11 ENSNNAG00000017017 ENSNNAG00000017022 ENSNNAG00000017027 ENSNNAG00000017034 ENSNNAG00000017037 HAS1 (ENSNNAG00000017046) ENSNNAG00000017062 ENSNNAG00000017070 ENSNNAG00000017076 SMG9 (ENSNNAG00000017093) ENSNNAG00000017105 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017121 ##22 ENSNNAG00000017124 ENSNNAG00000003592 ENSNNAG00000003609 ENSNNAG00000003631 ENSNNAG00000003672 ENSNNAG00000003685 ENSNNAG00000003701 ##22 ENSNNAG00000003711 ENSNNAG00000003728 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003756 ENSNNAG00000003769 ENSNNAG00000003780 XRCC1 (ENSNNAG00000003829) ENSNNAG00000004107 Elapidae_a ANCESTRAL SPECIES 361 ENSGT00950000183007.b.j.a.b ##22 ENSGT00950000183007.b.j.a.a.b ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000183007.b.j.a.b ##22 Mainland tiger snake DUPLICATION Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 1974 ENSNSUG00000001495 ##22 Mainland tiger snake MODERN SPECIES 1975 ENSNSUG00000001497 ##22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 1976 ENSNSUG00000001498 ##22 Mainland tiger snake MODERN SPECIES 1977 ENSNSUG00000001499 ##22 Eastern brown snake MODERN SPECIES 1393 ENSPTXG00000013063 ##22 Blue-lipped sea krait MODERN SPECIES 9147 ENSLLTG00000010851 ##22 ENSLLTG00000010837 ##22 Episquamata DUPLICATION Episquamata DUPLICATION Episquamata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.a ##22 Laterata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.a ##22 Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 311 ENSSMRG00000000353 ##22 Argentine black and white tegu MODERN SPECIES 267 ENSSMRG00000013748 ##22 ENSSMRG00000013749 ##22 ENSSMRG00000013750 Argentine black and white tegu MODERN SPECIES 196 ENSSMRG00000000939 ##22 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) ETHE1 (ENSSMRG00000005572) ZNF575 (ENSSMRG00000005573) XRCC1 (ENSSMRG00000005576) ENSSMRG00000005585 ##22 ENSSMRG00000005586 ##22 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005349 ENSSMRG00000005350 ENSSMRG00000005357 ENSSMRG00000005358 ENSSMRG00000005359 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) ETHE1 (ENSSMRG00000005572) ZNF575 (ENSSMRG00000005573) XRCC1 (ENSSMRG00000005576) ENSSMRG00000005585 ##22 ENSSMRG00000005586 ##22 ZNF576 (ENSSMRG00000005588) Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005359 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) ETHE1 (ENSSMRG00000005572) ZNF575 (ENSSMRG00000005573) Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005350 ENSSMRG00000005357 ENSSMRG00000005358 ENSSMRG00000005359 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005357 ENSSMRG00000005358 ENSSMRG00000005359 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) ETHE1 (ENSSMRG00000005572) ZNF575 (ENSSMRG00000005573) XRCC1 (ENSSMRG00000005576) Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 16 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 Common wall lizard MODERN SPECIES 16 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 ENSPMRG00000007565 ENSPMRG00000007572 ENSPMRG00000007577 ENSPMRG00000007583 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009203 ENSPMRG00000009218 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 Toxicofera ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.a ##22 Lizard MODERN SPECIES 805 ENSACAG00000039812 ##22 ENSACAG00000004426 ENSACAG00000004429 ENSACAG00000004431 ENSACAG00000044918 ENSACAG00000040345 ENSACAG00000038431 ENSACAG00000004433 ENSACAG00000004436 ENSACAG00000004441 ENSACAG00000035908 ENSACAG00000028902 ENSACAG00000029510 ENSACAG00000036617 ##22 ENSACAG00000037309 ##22 ENSACAG00000035181 ##22 ENSACAG00000004461 ##22 ENSACAG00000040604 SMG9 (ENSACAG00000004462) ENSACAG00000043868 ENSACAG00000004522 Episquamata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.b ##22 Toxicofera ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.b ##22 Lizard MODERN SPECIES 805 ENSACAG00000004522 ENSACAG00000043868 SMG9 (ENSACAG00000004462) ENSACAG00000040604 ENSACAG00000004461 ##22 ENSACAG00000035181 ##22 ENSACAG00000037309 ##22 ENSACAG00000036617 ##22 ENSACAG00000029510 ENSACAG00000028902 ENSACAG00000035908 ENSACAG00000004441 ENSACAG00000004436 ENSACAG00000004433 ENSACAG00000038431 ENSACAG00000040345 ENSACAG00000044918 ENSACAG00000004431 ENSACAG00000004429 ENSACAG00000004426 ENSACAG00000039812 ##22 ENSACAG00000028324 ENSACAG00000039542 Laterata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.a.b ##22 Common wall lizard MODERN SPECIES 16 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007487 SMG9 (ENSPMRG00000007471) ENSPMRG00000007462 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007373 ##22 ENSPMRG00000007360 ENSPMRG00000007351 ##22 ENSPMRG00000007347 ENSPMRG00000007338 ENSPMRG00000007333 ENSPMRG00000007321 ENSPMRG00000009253 ENSPMRG00000009245 ENSPMRG00000009238 ENSPMRG00000009233 ENSPMRG00000009218 ENSPMRG00000009203 ENSPMRG00000009196 ENSPMRG00000009185 ENSPMRG00000009181 ##22 Episquamata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.b ##22 Laterata ANCESTRAL SPECIES ENSGT00950000183007.b.j.b.b ##22 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005348 ENSSMRG00000005349 ENSSMRG00000005350 ENSSMRG00000005357 ENSSMRG00000005358 ENSSMRG00000005359 ENSSMRG00000005370 HAS1 (ENSSMRG00000005371) ENSSMRG00000005381 ENSSMRG00000005388 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005391 SMG9 (ENSSMRG00000005393) IRGC (ENSSMRG00000005398) ##22 ENSSMRG00000005401 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005434 ##22 ENSSMRG00000005457 ENSSMRG00000005468 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) Actinopterygii ANCESTRAL SPECIES 127 ENSGT00940000166159 ENSGT00940000160297 ENSGT00390000013276 ENSGT00940000160272 ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00980000198998 ENSGT00940000159510 ENSGT00940000160603 ENSGT00940000155418.a.b.b ENSGT00530000063252.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000163304 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00940000166443 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000164072 ENSGT01020000230346.D ENSGT00950000183058.B ENSGT00530000063991.b.a ENSGT01100000263535.a.b ENSGT01020000230438.B.a.a ENSGT00950000183066.a.a.a ENSGT01100000263551.b.b.a ENSGT00390000009936 Neopterygii ANCESTRAL SPECIES 93 ENSGT00940000166706 ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00990000205757 ENSGT00980000198998 ENSGT00940000156038.a.b ENSGT00950000183155.a.a.a.a.b ENSGT00950000183155.a.b.a.a.b ENSGT00950000183155.a.b.b ENSGT00950000183155.a.a.a.a.a ENSGT00530000068431 ENSGT00940000159510 ENSGT00940000160603 ENSGT01100000263586 ENSGT00940000163304 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00940000166443 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01050000244883.A.a.a.b ENSGT01020000230438.A ENSGT00940000154446.b.b.b ENSGT00390000009726 ENSGT00940000161223 ENSGT00390000013102 ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835 ENSGT00390000003308.a Spotted gar MODERN SPECIES 663 ENSLOCG00000003848 ENSLOCG00000003866 nphs1 (ENSLOCG00000003902) kirrel3l (ENSLOCG00000003936) ENSLOCG00000003953 APLP1 (ENSLOCG00000003972) ENSLOCG00000003984 ENSLOCG00000004000 ENSLOCG00000004010 ENSLOCG00000004031 ENSLOCG00000004055 lin37 (ENSLOCG00000004067) ENSLOCG00000018168 CTRL (ENSLOCG00000004085) ENSLOCG00000004098 irgf1 (ENSLOCG00000004112) #22 SMG9 (ENSLOCG00000004127) ENSLOCG00000004149 ENSLOCG00000004166 has1 (ENSLOCG00000004185) prss1 (ENSLOCG00000004195) ENSLOCG00000018169 ENSLOCG00000004208 ENSLOCG00000004224 ENSLOCG00000004242 ENSLOCG00000004261 si:ch211-79k12.1 (ENSLOCG00000004280) cadm4 (ENSLOCG00000004299) rps19 (ENSLOCG00000004313) cblc (ENSLOCG00000004326) ENSLOCG00000004342 Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00940000155418.a.b.b ENSGT00530000063252.b ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01030000234968 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00940000163304 ENSGT01100000263586 ENSGT00940000166443.d.a ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT01100000263533.b.a.a.b ENSGT01100000263519.E.b.b ENSGT00940000162287.B ENSGT00940000154446.b.b.b ENSGT00390000009726 ENSGT00940000161223 Osteoglossiformes ANCESTRAL SPECIES ENSGT00530000063252.b ENSGT00940000154616.b ENSGT01080000257365.b.a.a.a ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01030000234968 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT01030000235814 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT01100000263533.b.a.a.b ENSGT00940000162287.C ENSGT01100000263505.b.b.a.a.a.b ENSGT01050000244883.A.a.a.b ENSGT00990000203729 ENSGT01030000234576.D.a.a.b.a.a.a.b ENSGT01100000263533.b.a.b ENSGT00940000162287.G P. kingsleyae DUPLICATION P. kingsleyae DUPLICATION P. kingsleyae DUPLICATION P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 18 ENSPKIG00000013041 ENSPKIG00000013020 timp2b (ENSPKIG00000012987) sfxn2 (ENSPKIG00000012936) arl3b (ENSPKIG00000012886) TRIM8 (ENSPKIG00000012827) mfsd13a (ENSPKIG00000012741) ENSPKIG00000012715 SEMA4G (ENSPKIG00000012691) mrpl43 (ENSPKIG00000012675) twnk (ENSPKIG00000012661) LZTS2 (ENSPKIG00000012642) ENSPKIG00000012602 ENSPKIG00000012584 sfxn3 (ENSPKIG00000012573) ENSPKIG00000012539 #22 ENSPKIG00000012507 #22 ENSPKIG00000012481 ##22 SMG9 (ENSPKIG00000012446) ENSPKIG00000012422 ENSPKIG00000012405 ENSPKIG00000012389 mat1a (ENSPKIG00000012357) zgc:154058 (ENSPKIG00000012318) zgc:92749 (ENSPKIG00000012292) ENSPKIG00000012233 nfkb2 (ENSPKIG00000012183) ENSPKIG00000012160 ENSPKIG00000012133 glud1b (ENSPKIG00000012074) sncgb (ENSPKIG00000011985) P. kingsleyae MODERN SPECIES 18 ENSPKIG00000013020 timp2b (ENSPKIG00000012987) sfxn2 (ENSPKIG00000012936) arl3b (ENSPKIG00000012886) TRIM8 (ENSPKIG00000012827) mfsd13a (ENSPKIG00000012741) ENSPKIG00000012715 SEMA4G (ENSPKIG00000012691) mrpl43 (ENSPKIG00000012675) twnk (ENSPKIG00000012661) LZTS2 (ENSPKIG00000012642) ENSPKIG00000012602 ENSPKIG00000012584 sfxn3 (ENSPKIG00000012573) ENSPKIG00000012539 #22 ENSPKIG00000012507 #22 ENSPKIG00000012481 ##22 SMG9 (ENSPKIG00000012446) ENSPKIG00000012422 ENSPKIG00000012405 ENSPKIG00000012389 mat1a (ENSPKIG00000012357) zgc:154058 (ENSPKIG00000012318) zgc:92749 (ENSPKIG00000012292) ENSPKIG00000012233 nfkb2 (ENSPKIG00000012183) ENSPKIG00000012160 ENSPKIG00000012133 glud1b (ENSPKIG00000012074) sncgb (ENSPKIG00000011985) bmpr1ab (ENSPKIG00000011886) P. kingsleyae MODERN SPECIES 946 ENSPKIG00000009297 #22 ENSPKIG00000009316 ENSPKIG00000009327 #22 P. kingsleyae MODERN SPECIES 768 GBP2 (ENSPKIG00000020651) ENSPKIG00000020676 ENSPKIG00000020699 #22 IRGC (ENSPKIG00000020715) ##22 P. kingsleyae MODERN SPECIES 946 ENSPKIG00000009297 #22 ENSPKIG00000009316 ENSPKIG00000009327 #22 Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 9 ENSSFOG00015001603 ENSSFOG00015001578 ENSSFOG00015001546 ENSSFOG00015025393 GBP1 (ENSSFOG00015028763) ENSSFOG00015025390 ENSSFOG00015023347 ENSSFOG00015025944 ENSSFOG00015029320 ENSSFOG00015025364 ENSSFOG00015029371 ENSSFOG00015033131 ENSSFOG00015028461 ##22 ENSSFOG00015029346 ENSSFOG00015023339 #22 ENSSFOG00015028014 #22 ENSSFOG00015031478 ENSSFOG00015016894 ENSSFOG00015032396 ENSSFOG00015033037 IRGC (ENSSFOG00015016945) ##22 ENSSFOG00015025789 #22 SMG9 (ENSSFOG00015016961) KCNN4 (ENSSFOG00015017046) ENSSFOG00015025995 ENSSFOG00015026654 has1 (ENSSFOG00015017091) ENSSFOG00015017119 ENSSFOG00015017126 ENSSFOG00015026250 ENSSFOG00015024614 Asian bonytongue MODERN SPECIES 9 ENSSFOG00015023347 ENSSFOG00015025944 ENSSFOG00015029320 ENSSFOG00015025364 ENSSFOG00015029371 ENSSFOG00015033131 ENSSFOG00015028461 ##22 ENSSFOG00015029346 ENSSFOG00015023339 #22 ENSSFOG00015028014 #22 ENSSFOG00015031478 ENSSFOG00015016894 ENSSFOG00015032396 ENSSFOG00015033037 IRGC (ENSSFOG00015016945) ##22 ENSSFOG00015025789 #22 SMG9 (ENSSFOG00015016961) KCNN4 (ENSSFOG00015017046) ENSSFOG00015025995 ENSSFOG00015026654 has1 (ENSSFOG00015017091) ENSSFOG00015017119 ENSSFOG00015017126 ENSSFOG00015026250 ENSSFOG00015024614 prss1 (ENSSFOG00015017329) ENSSFOG00015019352 ENSSFOG00015028811 ENSSFOG00015024865 zgc:92590 (ENSSFOG00015019387) ENSSFOG00015029764 Asian bonytongue MODERN SPECIES 9 ENSSFOG00015001664 ENSSFOG00015001603 ENSSFOG00015001578 ENSSFOG00015001546 ENSSFOG00015025393 GBP1 (ENSSFOG00015028763) ENSSFOG00015025390 ENSSFOG00015023347 ENSSFOG00015025944 ENSSFOG00015029320 ENSSFOG00015025364 ENSSFOG00015029371 ENSSFOG00015033131 ENSSFOG00015028461 ##22 ENSSFOG00015029346 ENSSFOG00015023339 #22 ENSSFOG00015028014 #22 ENSSFOG00015031478 ENSSFOG00015016894 ENSSFOG00015032396 ENSSFOG00015033037 IRGC (ENSSFOG00015016945) ##22 ENSSFOG00015025789 #22 SMG9 (ENSSFOG00015016961) KCNN4 (ENSSFOG00015017046) ENSSFOG00015025995 ENSSFOG00015026654 has1 (ENSSFOG00015017091) ENSSFOG00015017119 ENSSFOG00015017126 ENSSFOG00015026250 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT01050000244848.B.a.b.f ENSGT00940000165798 ENSGT00940000159323.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT01100000263491.a.b.a.a.a.a.b ENSGT00940000163212.B ENSGT00940000161180 ENSGT00940000154363.A ENSGT00730000111056.g ENSGT00980000198994 ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.d ENSGT01050000244883.B.c.b ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.B.c.a ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00950000183111.b.b ENSGT00950000182929.B.a.a ENSGT00950000182929.B.b.b ENSGT00390000011584 ENSGT00990000204583 ENSGT00970000194350 ENSGT00390000015918 ENSGT00390000007913 Otomorpha ANCESTRAL SPECIES 730 ENSGT01050000244883.B.c.b ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 Clupeiformes ANCESTRAL SPECIES 758 ENSGT01050000244883.B.c.b ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 2 ENSCHAG00000002071 ENSCHAG00000002095 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 ENSCHAG00000006710 ENSCHAG00000006765 ENSCHAG00000006789 Atlantic herring MODERN SPECIES 2 ENSCHAG00000002095 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 ENSCHAG00000006710 ENSCHAG00000006765 ENSCHAG00000006789 ENSCHAG00000006797 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 2 ENSCHAG00000015393 MEGF8 (ENSCHAG00000001125) ENSCHAG00000002071 ENSCHAG00000002095 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 ENSCHAG00000006710 Atlantic herring MODERN SPECIES 2 cxcr3.1 (ENSCHAG00000015382) ENSCHAG00000015393 MEGF8 (ENSCHAG00000001125) ENSCHAG00000002071 ENSCHAG00000002095 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 Atlantic herring MODERN SPECIES 2 MEGF8 (ENSCHAG00000001125) ENSCHAG00000002071 ENSCHAG00000002095 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 ENSCHAG00000006710 ENSCHAG00000006765 Otophysi ANCESTRAL SPECIES 1 ENSGT00390000008778 ENSGT00530000063647.A.b.a ENSGT00390000002833 ENSGT00940000159511 ENSGT00940000158331 ENSGT00940000157888 ENSGT00940000164496.a.b ENSGT00940000158264.b ENSGT00940000157292.gc ENSGT00940000161180 ENSGT00940000154363.A ENSGT00730000111056.g ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.d ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00940000164859 ENSGT00530000063156.b ENSGT00950000182893.a.a.a.b.c ENSGT01050000244890.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156206.f ENSGT00940000156479.a ENSGT00940000159220.c Cyprinoidei ANCESTRAL SPECIES 13 ENSGT00940000159511 ENSGT00940000158331 ENSGT00940000157888 ENSGT00940000164496.a.b ENSGT00940000158264.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT01100000263491.a.b.a.a.a.a.b.n ENSGT00940000163212.B ENSGT00940000161180 ENSGT00940000154363.A.c ENSGT00730000111056.g ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.d ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 ENSGT00950000183007.b.e.b.a.b #22 ENSGT00940000165579.a.a.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00940000164859 ENSGT00530000063156.b ENSGT00950000182893.a.a.a.b.c ENSGT01050000244890.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156206.f ENSGT00940000156479.a Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 7 ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b Goldfish MODERN SPECIES 7 ENSCARG00000067359 PTPN3 (ENSCARG00000067554) ENSCARG00000067648 ENSCARG00000067659 epb41b (ENSCARG00000067745) trim35-28 (ENSCARG00000067772) MEGF8 (ENSCARG00000067792) ENSCARG00000067894 ENSCARG00000067899 arhgef1b (ENSCARG00000050441) cd79a (ENSCARG00000051143) ENSCARG00000051233 TMEM145 (ENSCARG00000051331) mrpl17 (ENSCARG00000051380) ENSCARG00000051441 ENSCARG00000051579 #22 ENSCARG00000051645 #22 ENSCARG00000051649 #22 ENSCARG00000051662 #22 irge4 (ENSCARG00000051668) #22 ENSCARG00000051676 cblc (ENSCARG00000051684) ENSCARG00000051775 ENSCARG00000051893 tomm40 (ENSCARG00000053910) nsmce2 (ENSCARG00000054030) derl1 (ENSCARG00000054069) zhx2a (ENSCARG00000054124) zgc:110410 (ENSCARG00000054138) fam8a1b (ENSCARG00000054263) ATXN1 (ENSCARG00000054288) Cyprininae_a ANCESTRAL SPECIES 6 ENSGT00940000164496.a.b.b ENSGT00940000158264.b.f ENSGT00530000063698.b.d ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000157292.gc ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b Common carp reference MODERN SPECIES 47 VIRMA (ENSCCRG00000004389) esrp1 (ENSCCRG00000004349) ENSCCRG00000023640 ENSCCRG00000026250 sgk2b (ENSCCRG00000072590) ENSCCRG00000004316 ENSCCRG00000053063 epb41b (ENSCCRG00000002741) trim35-28 (ENSCCRG00000002728) ENSCCRG00000023727 ENSCCRG00000055639 arhgef1b (ENSCCRG00000008922) ENSCCRG00000069562 mrpl17 (ENSCCRG00000009825) ENSCCRG00000009853 ENSCCRG00000009868 #22 ENSCCRG00000009871 #22 ENSCCRG00000009875 #22 irge4 (ENSCCRG00000009881) #22 ENSCCRG00000019388 cblc (ENSCCRG00000019391) ENSCCRG00000073323 ENSCCRG00000081953 tomm40 (ENSCCRG00000005967) nsmce2 (ENSCCRG00000005947) derl1 (ENSCCRG00000057981) zhx2a (ENSCCRG00000005927) fam8a1b (ENSCCRG00000072609) ENSCCRG00000048756 mylipb (ENSCCRG00000048753) ENSCCRG00000048730 Cyprininae ANCESTRAL SPECIES 7 ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b Goldfish MODERN SPECIES 7 PTPN3 (ENSCARG00000067554) ENSCARG00000067648 ENSCARG00000067659 epb41b (ENSCARG00000067745) trim35-28 (ENSCARG00000067772) MEGF8 (ENSCARG00000067792) ENSCARG00000067894 ENSCARG00000067899 arhgef1b (ENSCARG00000050441) cd79a (ENSCARG00000051143) ENSCARG00000051233 TMEM145 (ENSCARG00000051331) mrpl17 (ENSCARG00000051380) ENSCARG00000051441 ENSCARG00000051579 #22 ENSCARG00000051645 #22 ENSCARG00000051649 #22 ENSCARG00000051662 #22 irge4 (ENSCARG00000051668) #22 ENSCARG00000051676 cblc (ENSCARG00000051684) ENSCARG00000051775 ENSCARG00000051893 tomm40 (ENSCARG00000053910) nsmce2 (ENSCARG00000054030) derl1 (ENSCARG00000054069) zhx2a (ENSCARG00000054124) zgc:110410 (ENSCARG00000054138) fam8a1b (ENSCARG00000054263) ATXN1 (ENSCARG00000054288) mylipb (ENSCARG00000054323) Cyprininae_a ANCESTRAL SPECIES 6 ENSGT00940000158264.b.f ENSGT00530000063698.b.d ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000157292.gc ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b Common carp reference MODERN SPECIES 47 esrp1 (ENSCCRG00000004349) ENSCCRG00000023640 ENSCCRG00000026250 sgk2b (ENSCCRG00000072590) ENSCCRG00000004316 ENSCCRG00000053063 epb41b (ENSCCRG00000002741) trim35-28 (ENSCCRG00000002728) ENSCCRG00000023727 ENSCCRG00000055639 arhgef1b (ENSCCRG00000008922) ENSCCRG00000069562 mrpl17 (ENSCCRG00000009825) ENSCCRG00000009853 ENSCCRG00000009868 #22 ENSCCRG00000009871 #22 ENSCCRG00000009875 #22 irge4 (ENSCCRG00000009881) #22 ENSCCRG00000019388 cblc (ENSCCRG00000019391) ENSCCRG00000073323 ENSCCRG00000081953 tomm40 (ENSCCRG00000005967) nsmce2 (ENSCCRG00000005947) derl1 (ENSCCRG00000057981) zhx2a (ENSCCRG00000005927) fam8a1b (ENSCCRG00000072609) ENSCCRG00000048756 mylipb (ENSCCRG00000048753) ENSCCRG00000048730 dtnbp1a (ENSCCRG00000077798) Cyprininae ANCESTRAL SPECIES 102 ENSGT00940000158264.b.f ENSGT00530000063698.b.d ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00940000157292.gc ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000159511.b ENSGT00940000158331.d ENSGT00940000157888.e.b ENSGT00940000164496.a.b.a ENSGT00940000158264.b.e ENSGT00940000155617.B.ec.b.a ENSGT01030000234583.a.a.c.a.a.c.b ENSGT00940000160262.e ENSGT01100000263491.a.b.a.a.a.a.b.n.c.a ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.a.a.b #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a Golden-line barbel MODERN SPECIES 174 ENSSGRG00000050097 ENSSGRG00000050096 ENSSGRG00000050082 epb41b (ENSSGRG00000050059) trim35-28 (ENSSGRG00000050051) MEGF8 (ENSSGRG00000050049) ENSSGRG00000050048 ENSSGRG00000050047 arhgef1b (ENSSGRG00000050045) ENSSGRG00000050044 cd79a (ENSSGRG00000050042) LIPE (ENSSGRG00000050040) TMEM145 (ENSSGRG00000050026) mrpl17 (ENSSGRG00000050024) ENSSGRG00000050022 ENSSGRG00000050019 #22 ENSSGRG00000050016 #22 ENSSGRG00000050015 #22 irge4 (ENSSGRG00000050012) #22 ENSSGRG00000050011 cblc (ENSSGRG00000050007) ENSSGRG00000050000 ENSSGRG00000049759 tomm40 (ENSSGRG00000049747) nsmce2 (ENSSGRG00000049746) derl1 (ENSSGRG00000049728) zhx2a (ENSSGRG00000049723) zgc:110410 (ENSSGRG00000049712) fam8a1b (ENSSGRG00000049710) ATXN1 (ENSSGRG00000049709) mylipb (ENSSGRG00000049707) Common carp reference MODERN SPECIES 2 ENSCCRG00000026261 ENSCCRG00000023139 ENSCCRG00000057817 ENSCCRG00000002777 epb41b (ENSCCRG00000032551) trim35-28 (ENSCCRG00000061884) ENSCCRG00000002667 ENSCCRG00000082177 arhgef1b (ENSCCRG00000009659) cd79a (ENSCCRG00000064586) ENSCCRG00000008989 ENSCCRG00000009753 mrpl17 (ENSCCRG00000069240) ENSCCRG00000008398 ENSCCRG00000073781 ENSCCRG00000009842 #22 ENSCCRG00000080272 #22 ENSCCRG00000009878 #22 irge4 (ENSCCRG00000068891) #22 ENSCCRG00000030413 cblc (ENSCCRG00000072963) ENSCCRG00000058151 ENSCCRG00000006649 nsmce2 (ENSCCRG00000063420) tomm40 (ENSCCRG00000048491) derl1 (ENSCCRG00000065880) zhx2a (ENSCCRG00000012653) zgc:110410 (ENSCCRG00000012659) fam8a1b (ENSCCRG00000019380) ATXN1 (ENSCCRG00000005392) mylipb (ENSCCRG00000005386) Goldfish MODERN SPECIES 35 ENSCARG00000019380 ENSCARG00000019376 rab13 (ENSCARG00000019319) rps27.2 (ENSCARG00000019295) KCNN3 (ENSCARG00000019259) adar (ENSCARG00000018953) snx27b (ENSCARG00000018745) ENSCARG00000018727 s100a10b (ENSCARG00000018720) krtcap2 (ENSCARG00000018700) LIPE (ENSCARG00000018660) TMEM145 (ENSCARG00000018635) ENSCARG00000018628 mrpl17 (ENSCARG00000018619) ENSCARG00000018603 ENSCARG00000018597 #22 ENSCARG00000018593 #22 irge4 (ENSCARG00000018588) #22 ENSCARG00000018585 cblc (ENSCARG00000018567) ENSCARG00000018556 ENSCARG00000017978 tomm40 (ENSCARG00000017811) nsmce2 (ENSCARG00000017790) derl1 (ENSCARG00000017773) zhx2a (ENSCARG00000017767) fam8a1b (ENSCARG00000017754) ATXN1 (ENSCARG00000017748) mylipb (ENSCARG00000017725) dtnbp1a (ENSCARG00000017677) JARID2 (ENSCARG00000017077) Characiphysae ANCESTRAL SPECIES ENSGT00390000001688 ENSGT00940000157532.a ENSGT00390000008042.A.a.a ENSGT00390000008042.A.a.b ENSGT00940000170561.b ENSGT00940000161639.e ENSGT00940000158676 ENSGT00940000155299.A ENSGT00390000016416 ENSGT00940000156146.`b.a ENSGT00940000155331.A.e ENSGT00940000172523 ENSGT00940000161762 ENSGT00940000159827.f ENSGT00940000160239 ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00940000166120 ENSGT00940000158727.a.f ENSGT00940000164060.n.a ENSGT00940000158727.b.a.a.b ENSGT00940000164060.m ENSGT00550000074836.p ENSGT00940000155536 ENSGT00940000156143.a.a ENSGT00940000155377 ENSGT00940000155610.o.a.c Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00390000001688 ENSGT00940000157532.a ENSGT00390000008042.A.a.a ENSGT00390000008042.A.a.b ENSGT00940000170561.b ENSGT00940000161639.e ENSGT00940000158676 ENSGT00940000155299.A ENSGT00390000016416 ENSGT00940000156146.`b.a ENSGT00940000155331.A.e ENSGT00940000172523 ENSGT00940000161762 ENSGT00940000159827.f ENSGT00940000160239 ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00940000166120 ENSGT00940000158727.a.f ENSGT00940000164060.n.a ENSGT00940000158727.b.a.a.b ENSGT00940000164060.m ENSGT00550000074836.p ENSGT00940000155536 ENSGT00940000156143.a.a ENSGT00940000155377 ENSGT00940000155610.o.a.c Characoidei ANCESTRAL SPECIES 7 ENSGT00390000001688 ENSGT00940000157532.a ENSGT00390000008042.A.a.a ENSGT00390000008042.A.a.b ENSGT00940000170561.b ENSGT00940000161639.e ENSGT00940000158676 ENSGT00940000155299.A ENSGT00390000016416 ENSGT00940000156146.`b.a ENSGT00940000155331.A.e ENSGT00940000172523 ENSGT00940000161762 ENSGT00940000159827.f ENSGT00940000160239 ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00940000166120 ENSGT00940000158727.a.f ENSGT00940000164060.n.a ENSGT00940000158727.b.a.a.b ENSGT00940000164060.m ENSGT00550000074836.p ENSGT00940000155536 ENSGT00940000156143.a.a ENSGT00940000155377 ENSGT00940000155610.o.a.c Mexicana tetra MODERN SPECIES 1 STEAP1 (ENSAMXG00000000081) ENSAMXG00000037506 dtx3la (ENSAMXG00000034286) C1QL3 (ENSAMXG00000006424) RSU1 (ENSAMXG00000000077) CUBN (ENSAMXG00000000074) trdmt1 (ENSAMXG00000000066) vim (ENSAMXG00000000055) ENSAMXG00000039699 PDE1C (ENSAMXG00000001277) ppp1r17 (ENSAMXG00000035445) ENSAMXG00000001279 neurod6a (ENSAMXG00000001281) eif1b (ENSAMXG00000033877) ENSAMXG00000001283 #22 ENSAMXG00000026039 #22 ENSAMXG00000042458 ENSAMXG00000034639 cblc (ENSAMXG00000001292) ENSAMXG00000001295 ENSAMXG00000032542 rdh12l (ENSAMXG00000001299) PTCHD3 (ENSAMXG00000037708) fasn2 (ENSAMXG00000001302) PTCHD3 (ENSAMXG00000001309) ENSAMXG00000001318 YME1L1 (ENSAMXG00000001328) cyb5r4 (ENSAMXG00000029349) sim1a (ENSAMXG00000035738) ASCC3 (ENSAMXG00000001395) GRIK2 (ENSAMXG00000001407) Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT01100000263491.a.b.a.a.a.a.b ENSGT00940000157292.gc ENSGT00520000055635.c.b.b ENSGT00940000166708 ENSGT00940000158852 ENSGT01030000234778 ENSGT00940000154363.A ENSGT00730000111056.g ENSGT00980000198994 ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.c.a ENSGT01050000244883.B.c.b.b.a.a ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.B.c.b.a ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00950000183111.b.b ENSGT00950000182929.B.a.a ENSGT00950000182929.B.b.b ENSGT00990000204583 ENSGT00970000194350 ENSGT00390000015918 ENSGT00390000007913 ENSGT01020000230389.b.a.b Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00940000161202 ENSGT01050000244848.B.b ENSGT01050000244848.B.a.b.f.b ENSGT01050000244848.B.a.b.f.a ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT00950000182774.b.a.b.a.a ENSGT00940000163212.B ENSGT00940000161180 ENSGT00940000154363.A ENSGT00730000111056.g ENSGT00980000198994 ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.c.b.b.a.a ENSGT00950000183007.b.e.a #22 ENSGT01050000244883.C.g.b ENSGT01050000244883.C.g.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00390000003308.a.a ENSGT00940000165835.a ENSGT00950000183111.b.b.ob.b ENSGT00950000183111.b.b.ob.a ENSGT00950000182929.B.a.a ENSGT00950000182929.B.b.b ENSGT00990000204583 ENSGT00970000194350 ENSGT00390000015918 ENSGT00940000172196 ENSGT00940000161038 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 5 ENSGT00940000160262.j ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT01100000263491.a.b.a.a.a.a.b.u.a.a.a.a ENSGT00940000161180.n.b ENSGT00940000154363.A.b ENSGT00730000111056.g.c.a ENSGT00980000198994 ENSGT00940000153981.B.c.a ENSGT00390000010698.y.a ENSGT01050000244883.B.c.b.b.a.a.b.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.a.b ENSGT01050000244883.C.g.a.b ENSGT00940000156631.A.d.b ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.C.g.b.c.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000183111.b.b.nb ENSGT00950000183111.b.b.ob.a ENSGT00950000182929.B.a.a.a.a ENSGT00950000182929.B.a.a.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00390000015918.f Huchen DUPLICATION Huchen MODERN SPECIES 560 ENSHHUG00000022548 ENSHHUG00000022546 ENSHHUG00000022542 ENSHHUG00000022536 ENSHHUG00000022533 ENSHHUG00000022516 arhgef1b (ENSHHUG00000022431) ENSHHUG00000022425 LIPE (ENSHHUG00000022417) TMEM145 (ENSHHUG00000022400) mrpl17 (ENSHHUG00000022379) ENSHHUG00000022272 ENSHHUG00000022261 ENSHHUG00000022255 ENSHHUG00000022244 #22 ENSHHUG00000022242 #22 ENSHHUG00000022236 ENSHHUG00000022229 cblc (ENSHHUG00000022186) ENSHHUG00000022175 tomm40 (ENSHHUG00000022148) ENSHHUG00000022112 ENSHHUG00000022104 ENSHHUG00000022091 ENSHHUG00000022090 ENSHHUG00000022084 apoeb (ENSHHUG00000022079) ENSHHUG00000022066 ENSHHUG00000022061 apoc4 (ENSHHUG00000022056) apoa2 (ENSHHUG00000022040) Huchen MODERN SPECIES 2411 ENSHHUG00000037967 ENSHHUG00000037971 #22 ENSHHUG00000037978 #22 ENSHHUG00000037980 ENSHHUG00000037991 cblc (ENSHHUG00000038010) ENSHHUG00000038018 tomm40 (ENSHHUG00000038046) ENSHHUG00000038075 ENSHHUG00000038096 ENSHHUG00000038250 Salmoninae_a ANCESTRAL SPECIES 61 ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT00950000182774.b.a.b.a.a.a.a ENSGT00940000163212.B.f ENSGT00940000161180.n.a ENSGT00940000154363.A.b ENSGT00730000111056.g.c.a ENSGT00940000153981.B.c.b.a ENSGT00390000010698.y.b ENSGT01050000244883.B.c.b.b.a.a.b.a.a ENSGT01050000244883.B.c.b.b.a.a.b.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.a.b ENSGT01050000244883.C.g.a.b ENSGT00940000156631.A.d.b ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.C.g.b.c.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00970000194350 ENSGT00390000015918.f ENSGT00940000172196.b Salmo ANCESTRAL SPECIES 57 ENSGT01050000244848.B.a.b.f.b.b ENSGT01050000244848.B.a.b.f.a.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262.i.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT00940000157292.gc ENSGT00940000161180.m.b ENSGT00940000163212.B.f ENSGT00940000161180.n.a ENSGT00940000154363.A.b ENSGT00730000111056.g.c.a ENSGT00940000153981.B.d.a ENSGT00390000010698.z.a ENSGT01050000244883.B.c.b.b.a.a.a.a.a ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.C.g.b.c.a.a ENSGT01050000244883.C.g.b.d ENSGT01050000244883.C.g.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00970000194350 ENSGT00390000015918.f ENSGT00940000172196.b Atlantic salmon MODERN SPECIES 24 ENSSSAG00000110053 ENSSSAG00000102412 ENSSSAG00000036901 ENSSSAG00000037034 ENSSSAG00000013879 ENSSSAG00000003812 ENSSSAG00000118951 arhgef1b (ENSSSAG00000003540) cd79a (ENSSSAG00000113980) ENSSSAG00000003498 ENSSSAG00000003447 mrpl17 (ENSSSAG00000100835) ENSSSAG00000113900 ENSSSAG00000110487 ENSSSAG00000118174 ENSSSAG00000003363 #22 ENSSSAG00000003339 tryp (ENSSSAG00000108540) ENSSSAG00000003317 ENSSSAG00000003302 ENSSSAG00000003291 ENSSSAG00000003239 ENSSSAG00000003193 ENSSSAG00000003152 ENSSSAG00000095350 ENSSSAG00000101683 ENSSSAG00000003137 apoeb (ENSSSAG00000120281) ENSSSAG00000010260 apoc4 (ENSSSAG00000003123) apoa2 (ENSSSAG00000115976) River trout MODERN SPECIES 22 CXCR3 (ENSSTUG00000031982) trim35-28 (ENSSTUG00000031960) MEGF8 (ENSSTUG00000031908) ENSSTUG00000031879 ENSSTUG00000031855 ENSSTUG00000031835 ENSSTUG00000031828 ENSSTUG00000031754 arhgef1b (ENSSTUG00000031424) cd79a (ENSSTUG00000031393) LIPE (ENSSTUG00000029953) TMEM145 (ENSSTUG00000029781) mrpl17 (ENSSTUG00000029768) ENSSTUG00000029708 ENSSTUG00000029649 ENSSTUG00000029636 #22 ENSSTUG00000029615 ENSSTUG00000029595 cblc (ENSSTUG00000029557) ENSSTUG00000029538 tomm40 (ENSSTUG00000029452) ENSSTUG00000029297 ENSSTUG00000029201 ENSSTUG00000029178 ENSSTUG00000029173 ENSSTUG00000029172 ENSSTUG00000029168 ENSSTUG00000029164 apoeb (ENSSTUG00000029156) ENSSTUG00000029147 apoc4 (ENSSTUG00000029140) Oncorhynchus ANCESTRAL SPECIES 3 ENSGT01000000216948 ENSGT01050000244848.B.b.e ENSGT01050000244848.B.a.b.f.b.b.c ENSGT01050000244848.B.a.b.f.a.b ENSGT01030000234583.a.a.c.a.a.t.a ENSGT00940000160262.i.d ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT00940000161180.m.b ENSGT00940000154363.A.a ENSGT00730000111056.g.d.b ENSGT00980000198994 ENSGT00940000153981.B.c.a ENSGT00980000202204.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00970000194350.c.a ENSGT00390000015918.f ENSGT00940000172196.b Rainbow trout MODERN SPECIES 11 ENSOMYG00000001605 ENSOMYG00000076742 ENSOMYG00000001655 ENSOMYG00000066984 ENSOMYG00000054961 arhgef1b (ENSOMYG00000027463) cd79a (ENSOMYG00000027942) ENSOMYG00000028203 ENSOMYG00000028823 ENSOMYG00000073938 mrpl17 (ENSOMYG00000028833) ENSOMYG00000075024 ENSOMYG00000028938 ENSOMYG00000028978 ENSOMYG00000028986 #22 ENSOMYG00000029037 #22 ENSOMYG00000027927 ENSOMYG00000029101 ENSOMYG00000029132 ENSOMYG00000029241 ENSOMYG00000029357 ENSOMYG00000029408 ENSOMYG00000063630 ENSOMYG00000069639 ENSOMYG00000029424 ENSOMYG00000029439 apoeb (ENSOMYG00000029463) APOC-Ib (ENSOMYG00000061122) apoc4 (ENSOMYG00000068319) ENSOMYG00000057782 apoa2 (ENSOMYG00000029517) Salmoninae ANCESTRAL SPECIES 5 ENSGT01050000244848.B.a.b.f.b.b ENSGT01050000244848.B.a.b.f.a.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262.i ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b ENSGT00940000160262.j ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT01100000263491.a.b.a.a.a.a.b.u.a.a.a.a ENSGT00940000161180.n.b ENSGT00940000154363.A.b ENSGT00730000111056.g.c.a ENSGT00980000198994 ENSGT00940000153981.B.c.a ENSGT00390000010698.y.a ENSGT01050000244883.B.c.b.b.a.a.b.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.a.b ENSGT01050000244883.C.g.a.b ENSGT00940000156631.A.d.b ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.C.g.b.c.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000183111.b.b.nb ENSGT00950000183111.b.b.ob.a Huchen MODERN SPECIES 2411 ENSHHUG00000037967 ENSHHUG00000037971 #22 ENSHHUG00000037978 #22 ENSHHUG00000037980 ENSHHUG00000037991 cblc (ENSHHUG00000038010) ENSHHUG00000038018 tomm40 (ENSHHUG00000038046) ENSHHUG00000038075 ENSHHUG00000038096 ENSHHUG00000038250 Salmoninae_a ANCESTRAL SPECIES 61 ENSGT01050000244848.B.a.b.f.b.b ENSGT01050000244848.B.a.b.f.a.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262.i ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT00950000182774.b.a.b.a.a.a.a ENSGT00940000163212.B.f ENSGT00940000161180.n.a ENSGT00940000154363.A.b ENSGT00730000111056.g.c.a ENSGT00940000153981.B.c.b.a ENSGT00390000010698.y.b ENSGT01050000244883.B.c.b.b.a.a.b.a.a ENSGT01050000244883.B.c.b.b.a.a.b.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.a.b ENSGT01050000244883.C.g.a.b ENSGT00940000156631.A.d.b ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.C.g.b.c.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b Salmo ANCESTRAL SPECIES 77 ENSGT00950000183199.a.b.b ENSGT00940000163576.k.a ENSGT01050000244848.B.b.f ENSGT01050000244848.B.a.b.f.b.a ENSGT01050000244848.B.a.b.f.a.a ENSGT00970000193390.c.b.b.b.a.v ENSGT00940000160262.i.a ENSGT00950000182774.b.a.b.a.a.b ENSGT00940000161180.m.a ENSGT00990000210261 ENSGT00730000111056.g.c.b ENSGT00940000153981.B.d.b ENSGT00390000010698.z.b ENSGT01050000244883.B.c.b.b.a.a.b.a.b ENSGT01050000244883.B.c.b.b.a.a.a.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.a.b ENSGT01050000244883.C.g.a.b ENSGT00940000156631.A.c ENSGT00940000161392.i ENSGT00390000003308.a.a.c ENSGT00940000165835.a.d ENSGT00940000175701 ENSGT00950000182929.B.a.a.a.b ENSGT00950000182929.B.b.b.c ENSGT00990000204583.a ENSGT00390000015918.e ENSGT00940000172196.a ENSGT00990000210678 ENSGT00940000161038.k.b ENSGT00390000013102.a.a.c.a Atlantic salmon MODERN SPECIES 11 ENSSSAG00000057405 cxcr3.2 (ENSSSAG00000116125) ENSSSAG00000100590 ENSSSAG00000057429 ENSSSAG00000057438 ENSSSAG00000036389 ENSSSAG00000049764 ENSSSAG00000101726 ENSSSAG00000036532 ENSSSAG00000118827 arhgef1b (ENSSSAG00000083490) ENSSSAG00000009810 ENSSSAG00000009921 mrpl17 (ENSSSAG00000003427) ENSSSAG00000093034 ENSSSAG00000010068 #22 ENSSSAG00000121140 ENSSSAG00000115661 ENSSSAG00000010086 ENSSSAG00000010142 ENSSSAG00000010155 ENSSSAG00000010190 ENSSSAG00000086296 ENSSSAG00000119332 apoeb (ENSSSAG00000085443) ENSSSAG00000003126 apoa2 (ENSSSAG00000010281) ENSSSAG00000010289 ENSSSAG00000010301 ENSSSAG00000003087 rps19 (ENSSSAG00000010392) River trout MODERN SPECIES 30 ENSSTUG00000039553 ENSSTUG00000039556 MEGF8 (ENSSTUG00000039573) ENSSTUG00000039674 ENSSTUG00000039689 ENSSTUG00000039693 ENSSTUG00000039700 arhgef1b (ENSSTUG00000039752) ENSSTUG00000039948 LIPE (ENSSTUG00000040025) TMEM145 (ENSSTUG00000040126) mrpl17 (ENSSTUG00000040300) ENSSTUG00000040306 ENSSTUG00000040316 ENSSTUG00000040363 ENSSTUG00000040379 #22 ENSSTUG00000040386 ENSSTUG00000040402 cblc (ENSSTUG00000040424) ENSSTUG00000040453 tomm40 (ENSSTUG00000040468) ENSSTUG00000040694 ENSSTUG00000041048 ENSSTUG00000041058 ENSSTUG00000041083 apoeb (ENSSTUG00000041096) ENSSTUG00000041114 apoa2 (ENSSTUG00000041142) ENSSTUG00000041171 ENSSTUG00000041187 ENSSTUG00000041218 Oncorhynchus ANCESTRAL SPECIES 3 ENSGT01100000263479.G.q.b.b ENSGT01000000216948 ENSGT01050000244848.B.b.e ENSGT01050000244848.B.a.b.f.b.b.c ENSGT01050000244848.B.a.b.f.a.b ENSGT01030000234583.a.a.c.a.a.t.a ENSGT00940000160262.i.d ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a ENSGT00940000161180.m.b ENSGT00940000154363.A.a ENSGT00730000111056.g.d.b ENSGT00980000198994 ENSGT00940000153981.B.c.a ENSGT00980000202204.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT00950000183007.b.e.a.e.a #22 ENSGT01050000244883.B.c.b.b.a.a.a.a ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00970000194350.c.a ENSGT00390000015918.f Rainbow trout MODERN SPECIES 11 ENSOMYG00000027228 ENSOMYG00000001605 ENSOMYG00000076742 ENSOMYG00000001655 ENSOMYG00000066984 ENSOMYG00000054961 arhgef1b (ENSOMYG00000027463) cd79a (ENSOMYG00000027942) ENSOMYG00000028203 ENSOMYG00000028823 ENSOMYG00000073938 mrpl17 (ENSOMYG00000028833) ENSOMYG00000075024 ENSOMYG00000028938 ENSOMYG00000028978 ENSOMYG00000028986 #22 ENSOMYG00000029037 #22 ENSOMYG00000027927 ENSOMYG00000029101 ENSOMYG00000029132 ENSOMYG00000029241 ENSOMYG00000029357 ENSOMYG00000029408 ENSOMYG00000063630 ENSOMYG00000069639 ENSOMYG00000029424 ENSOMYG00000029439 apoeb (ENSOMYG00000029463) APOC-Ib (ENSOMYG00000061122) apoc4 (ENSOMYG00000068319) ENSOMYG00000057782 Oncorhynchus_a ANCESTRAL SPECIES 26 ENSGT00940000161180.m.b ENSGT00940000154363.A.a ENSGT00730000111056.g.d.b ENSGT00940000153981.B.c.b.b ENSGT00980000198994 ENSGT00940000153981.B.c.a ENSGT00390000010698.y.a ENSGT01050000244883.B.c.b.b.a.a.a.b.a.b ENSGT00980000202204.b ENSGT00950000183007.b.e.a.e.b #22 ENSGT01050000244883.C.g.b.c.b ENSGT01050000244883.C.g.a.a.a ENSGT00940000156631.A.d.a.b ENSGT00940000161392.j ENSGT00390000003308.a.a.d ENSGT00940000165835.a.c ENSGT00950000183111.b.b.ob.b ENSGT00950000182929.B.a.a.b.a ENSGT00950000182929.B.a.a.b.b ENSGT00950000182929.B.b.b.d ENSGT00990000204583.b ENSGT00970000194350.c.a ENSGT00390000015918.f ENSGT00940000172196.b ENSGT01020000230389.b.a.b Chinook salmon MODERN SPECIES 108 cd79a (ENSOTSG00005012523) LIPE (ENSOTSG00005012526) ENSOTSG00005012528 ENSOTSG00005012530 mrpl17 (ENSOTSG00005012533) ENSOTSG00005012535 ENSOTSG00005012536 ENSOTSG00005012554 ENSOTSG00005012555 #22 ENSOTSG00005012557 ENSOTSG00005012558 cblc (ENSOTSG00005012559) ENSOTSG00005012562 tomm40 (ENSOTSG00005012564) ENSOTSG00005012566 ENSOTSG00005012604 ENSOTSG00005012605 ENSOTSG00005012606 apoeb (ENSOTSG00005012608) ENSOTSG00005012609 ENSOTSG00005012610 apoa2 (ENSOTSG00005012611) ENSOTSG00005012612 ENSOTSG00005012613 Coho salmon MODERN SPECIES 4 ENSOKIG00005015832 ENSOKIG00005015816 ENSOKIG00005015799 ENSOKIG00005015787 ENSOKIG00005015772 ENSOKIG00005015761 ENSOKIG00005015754 arhgef1b (ENSOKIG00005015007) cd79a (ENSOKIG00005014962) ENSOKIG00005014929 TMEM145 (ENSOKIG00005014789) mrpl17 (ENSOKIG00005014757) ENSOKIG00005014675 ENSOKIG00005014636 ENSOKIG00005014630 ENSOKIG00005014618 #22 ENSOKIG00005014538 ENSOKIG00005014525 cblc (ENSOKIG00005014509) ENSOKIG00005014501 ENSOKIG00005014460 ENSOKIG00005014390 ENSOKIG00005014370 ENSOKIG00005014369 ENSOKIG00005014363 apoeb (ENSOKIG00005014349) ENSOKIG00005014342 apoc4 (ENSOKIG00005014339) ENSOKIG00005014332 ENSOKIG00005014303 ENSOKIG00005014294 Salmoninae ANCESTRAL SPECIES 2193 ENSGT01050000244883.B.c.b.b.b ENSGT00950000183007.b.e.a.f #22 Huchen MODERN SPECIES 560 MEGF8 (ENSHHUG00000022552) ENSHHUG00000022548 ENSHHUG00000022546 ENSHHUG00000022542 ENSHHUG00000022536 ENSHHUG00000022533 ENSHHUG00000022516 arhgef1b (ENSHHUG00000022431) ENSHHUG00000022425 LIPE (ENSHHUG00000022417) TMEM145 (ENSHHUG00000022400) mrpl17 (ENSHHUG00000022379) ENSHHUG00000022272 ENSHHUG00000022261 ENSHHUG00000022255 ENSHHUG00000022244 #22 ENSHHUG00000022242 #22 ENSHHUG00000022236 ENSHHUG00000022229 cblc (ENSHHUG00000022186) ENSHHUG00000022175 tomm40 (ENSHHUG00000022148) ENSHHUG00000022112 ENSHHUG00000022104 ENSHHUG00000022091 ENSHHUG00000022090 ENSHHUG00000022084 apoeb (ENSHHUG00000022079) ENSHHUG00000022066 ENSHHUG00000022061 apoc4 (ENSHHUG00000022056) Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183007.b.e.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183007.b.e.a #22 Pinecone sodierfish MODERN SPECIES 7 bcam (ENSMMDG00005009666) apoc2 (ENSMMDG00005009665) apoa2 (ENSMMDG00005009654) ENSMMDG00005009652 ENSMMDG00005009649 apoeb (ENSMMDG00005009647) ENSMMDG00005009639 ENSMMDG00005009637 ENSMMDG00005009528 tomm40 (ENSMMDG00005020687) ENSMMDG00005020380 ENSMMDG00005020359 cblc (ENSMMDG00005020356) ENSMMDG00005020352 ENSMMDG00005020349 ENSMMDG00005020346 #22 ENSMMDG00005020339 ENSMMDG00005020338 ENSMMDG00005020294 ENSMMDG00005020291 mrpl17 (ENSMMDG00005020287) TMEM145 (ENSMMDG00005020246) ENSMMDG00005020232 LIPE (ENSMMDG00005020177) cd79a (ENSMMDG00005020174) ENSMMDG00005020170 ENSMMDG00005020167 ENSMMDG00005020166 ENSMMDG00005020164 MEGF8 (ENSMMDG00005020022) trim35-28 (ENSMMDG00005020013) Clupeocephala ANCESTRAL SPECIES ENSGT00950000183007.b.e.b #22 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a #22 Otophysi ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a #22 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a #22 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a.a.a #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a.a.a #22 Golden-line barbel MODERN SPECIES 897 ENSSGRG00000051978 #22 stac3 (ENSSGRG00000051977) ENSSGRG00000051974 ENSSGRG00000051971 ENSSGRG00000051970 ENSSGRG00000051969 ENSSGRG00000051968 Common carp reference MODERN SPECIES 2 ENSCCRG00000067838 ENSCCRG00000061748 ENSCCRG00000079857 ENSCCRG00000042495 csnk2a1 (ENSCCRG00000013280) ENSCCRG00000013274 ENSCCRG00000012824 scrt1b (ENSCCRG00000027533) dgat1b (ENSCCRG00000050053) ENSCCRG00000080553 ENSCCRG00000059607 ENSCCRG00000050041 ptk2ab (ENSCCRG00000042172) ldlrad4b (ENSCCRG00000062199) fam210ab (ENSCCRG00000035323) ENSCCRG00000049724 #22 lmna (ENSCCRG00000023524) ENSCCRG00000024580 pdia7 (ENSCCRG00000005732) cct3 (ENSCCRG00000005632) ENSCCRG00000005900 ENSCCRG00000010934 ENSCCRG00000075497 sema6e (ENSCCRG00000043021) lysmd1 (ENSCCRG00000057750) ENSCCRG00000074329 tnfaip8l2b (ENSCCRG00000061296) ENSCCRG00000076523 tmod4 (ENSCCRG00000082416) VPS72 (ENSCCRG00000042686) mcl1b (ENSCCRG00000058644) Cyprininae ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a.a.b #22 Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000157888.e.b ENSGT00940000164496.a.b.a ENSGT00940000158264.b.e ENSGT00940000155617.B.ec.b.a ENSGT01030000234583.a.a.c.a.a.c.b ENSGT00940000160262.e ENSGT01100000263491.a.b.a.a.a.a.b.n.c.a ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.a.a.b #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a ENSGT00940000159220.c.a Golden-line barbel MODERN SPECIES 174 ENSSGRG00000050082 epb41b (ENSSGRG00000050059) trim35-28 (ENSSGRG00000050051) MEGF8 (ENSSGRG00000050049) ENSSGRG00000050048 ENSSGRG00000050047 arhgef1b (ENSSGRG00000050045) ENSSGRG00000050044 cd79a (ENSSGRG00000050042) LIPE (ENSSGRG00000050040) TMEM145 (ENSSGRG00000050026) mrpl17 (ENSSGRG00000050024) ENSSGRG00000050022 ENSSGRG00000050019 #22 ENSSGRG00000050016 #22 ENSSGRG00000050015 #22 irge4 (ENSSGRG00000050012) #22 ENSSGRG00000050011 cblc (ENSSGRG00000050007) ENSSGRG00000050000 ENSSGRG00000049759 tomm40 (ENSSGRG00000049747) nsmce2 (ENSSGRG00000049746) derl1 (ENSSGRG00000049728) zhx2a (ENSSGRG00000049723) zgc:110410 (ENSSGRG00000049712) fam8a1b (ENSSGRG00000049710) ATXN1 (ENSSGRG00000049709) mylipb (ENSSGRG00000049707) dtnbp1a (ENSSGRG00000049706) JARID2 (ENSSGRG00000049653) Common carp reference MODERN SPECIES 2 ENSCCRG00000057817 ENSCCRG00000002777 epb41b (ENSCCRG00000032551) trim35-28 (ENSCCRG00000061884) ENSCCRG00000002667 ENSCCRG00000082177 arhgef1b (ENSCCRG00000009659) cd79a (ENSCCRG00000064586) ENSCCRG00000008989 ENSCCRG00000009753 mrpl17 (ENSCCRG00000069240) ENSCCRG00000008398 ENSCCRG00000073781 ENSCCRG00000009842 #22 ENSCCRG00000080272 #22 ENSCCRG00000009878 #22 irge4 (ENSCCRG00000068891) #22 ENSCCRG00000030413 cblc (ENSCCRG00000072963) ENSCCRG00000058151 ENSCCRG00000006649 nsmce2 (ENSCCRG00000063420) tomm40 (ENSCCRG00000048491) derl1 (ENSCCRG00000065880) zhx2a (ENSCCRG00000012653) zgc:110410 (ENSCCRG00000012659) fam8a1b (ENSCCRG00000019380) ATXN1 (ENSCCRG00000005392) mylipb (ENSCCRG00000005386) dtnbp1a (ENSCCRG00000048747) JARID2 (ENSCCRG00000049112) Goldfish MODERN SPECIES 7 ENSCARG00000067659 epb41b (ENSCARG00000067745) trim35-28 (ENSCARG00000067772) MEGF8 (ENSCARG00000067792) ENSCARG00000067894 ENSCARG00000067899 arhgef1b (ENSCARG00000050441) cd79a (ENSCARG00000051143) ENSCARG00000051233 TMEM145 (ENSCARG00000051331) mrpl17 (ENSCARG00000051380) ENSCARG00000051441 ENSCARG00000051579 #22 ENSCARG00000051645 #22 ENSCARG00000051649 #22 ENSCARG00000051662 #22 irge4 (ENSCARG00000051668) #22 ENSCARG00000051676 cblc (ENSCARG00000051684) ENSCARG00000051775 ENSCARG00000051893 tomm40 (ENSCARG00000053910) nsmce2 (ENSCARG00000054030) derl1 (ENSCARG00000054069) zhx2a (ENSCARG00000054124) zgc:110410 (ENSCARG00000054138) fam8a1b (ENSCARG00000054263) ATXN1 (ENSCARG00000054288) mylipb (ENSCARG00000054323) dtnbp1a (ENSCARG00000054340) JARID2 (ENSCARG00000054376) Cyprininae ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a.b #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 14 ENSCARG00000023193 ENSCARG00000023199 GRM7 (ENSCARG00000023226) nicn1 (ENSCARG00000023476) dag1 (ENSCARG00000023482) pcbp4 (ENSCARG00000023492) rbm15b (ENSCARG00000023519) manf (ENSCARG00000023537) DOCK3 (ENSCARG00000023610) ENSCARG00000024994 ENSCARG00000025003 ENSCARG00000025008 ENSCARG00000025017 ENSCARG00000025028 ENSCARG00000025032 ENSCARG00000025040 #22 ENSCARG00000025050 ENSCARG00000025056 ENSCARG00000025172 ENSCARG00000025078 ENSCARG00000025185 ENSCARG00000025193 ENSCARG00000025199 fasn2 (ENSCARG00000025236) PTCHD3 (ENSCARG00000025254) ENSCARG00000025265 ENSCARG00000025273 senp7b (ENSCARG00000025302) ENSCARG00000025325 abi3bpb (ENSCARG00000025359) jagn1b (ENSCARG00000025585) Goldfish MODERN SPECIES 1344 ENSCARG00000037087 ENSCARG00000037081 ENSCARG00000037070 ENSCARG00000037048 ENSCARG00000037029 ENSCARG00000037022 ENSCARG00000037010 ENSCARG00000037003 ENSCARG00000036997 ENSCARG00000036991 #22 ENSCARG00000036985 ENSCARG00000036978 ENSCARG00000036975 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a.a.b #22 Golden-line barbel MODERN SPECIES 1736 ENSSGRG00000019513 #22 ENSSGRG00000019514 ENSSGRG00000019518 ENSSGRG00000019520 Common carp reference MODERN SPECIES 1 ENSCCRG00000039038 ENSCCRG00000018326 ENSCCRG00000041758 ENSCCRG00000041755 ENSCCRG00000053600 ENSCCRG00000080773 ENSCCRG00000063173 ENSCCRG00000076803 ENSCCRG00000079406 ENSCCRG00000054377 ENSCCRG00000074015 ENSCCRG00000042208 ENSCCRG00000079539 ENSCCRG00000044281 ENSCCRG00000041743 ENSCCRG00000069538 #22 ENSCCRG00000075458 ENSCCRG00000078407 ENSCCRG00000068451 ENSCCRG00000056648 ENSCCRG00000080701 ENSCCRG00000078583 ENSCCRG00000071958 ENSCCRG00000054366 ENSCCRG00000079070 ENSCCRG00000059969 ENSCCRG00000065836 ENSCCRG00000071626 ENSCCRG00000059524 ENSCCRG00000062826 ENSCCRG00000070891 Cyprinoidei ANCESTRAL SPECIES 13 ENSGT00940000157888 ENSGT00940000164496.a.b ENSGT00940000158264.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT01100000263491.a.b.a.a.a.a.b.n ENSGT00940000163212.B ENSGT00940000161180 ENSGT00940000154363.A.c ENSGT00730000111056.g ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.d ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 ENSGT00950000183007.b.e.b.a.b #22 ENSGT00940000165579.a.a.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00940000164859 ENSGT00530000063156.b ENSGT00950000182893.a.a.a.b.c ENSGT01050000244890.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156206.f ENSGT00940000156479.a ENSGT00940000159220.c ENSGT00940000162740 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 7 ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b ENSGT00940000162740.m ENSGT00950000183211.a.b.a.e.b Goldfish MODERN SPECIES 7 epb41b (ENSCARG00000067745) trim35-28 (ENSCARG00000067772) MEGF8 (ENSCARG00000067792) ENSCARG00000067894 ENSCARG00000067899 arhgef1b (ENSCARG00000050441) cd79a (ENSCARG00000051143) ENSCARG00000051233 TMEM145 (ENSCARG00000051331) mrpl17 (ENSCARG00000051380) ENSCARG00000051441 ENSCARG00000051579 #22 ENSCARG00000051645 #22 ENSCARG00000051649 #22 ENSCARG00000051662 #22 irge4 (ENSCARG00000051668) #22 ENSCARG00000051676 cblc (ENSCARG00000051684) ENSCARG00000051775 ENSCARG00000051893 tomm40 (ENSCARG00000053910) nsmce2 (ENSCARG00000054030) derl1 (ENSCARG00000054069) zhx2a (ENSCARG00000054124) zgc:110410 (ENSCARG00000054138) fam8a1b (ENSCARG00000054263) ATXN1 (ENSCARG00000054288) mylipb (ENSCARG00000054323) dtnbp1a (ENSCARG00000054340) JARID2 (ENSCARG00000054376) pard6ga (ENSCARG00000054770) Cyprininae_a ANCESTRAL SPECIES 6 ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000157292.gc ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b ENSGT00940000162740.m ENSGT00950000183211.a.b.a.e.b Common carp reference MODERN SPECIES 47 ENSCCRG00000026250 sgk2b (ENSCCRG00000072590) ENSCCRG00000004316 ENSCCRG00000053063 epb41b (ENSCCRG00000002741) trim35-28 (ENSCCRG00000002728) ENSCCRG00000023727 ENSCCRG00000055639 arhgef1b (ENSCCRG00000008922) ENSCCRG00000069562 mrpl17 (ENSCCRG00000009825) ENSCCRG00000009853 ENSCCRG00000009868 #22 ENSCCRG00000009871 #22 ENSCCRG00000009875 #22 irge4 (ENSCCRG00000009881) #22 ENSCCRG00000019388 cblc (ENSCCRG00000019391) ENSCCRG00000073323 ENSCCRG00000081953 tomm40 (ENSCCRG00000005967) nsmce2 (ENSCCRG00000005947) derl1 (ENSCCRG00000057981) zhx2a (ENSCCRG00000005927) fam8a1b (ENSCCRG00000072609) ENSCCRG00000048756 mylipb (ENSCCRG00000048753) ENSCCRG00000048730 dtnbp1a (ENSCCRG00000077798) zgc:136493 (ENSCCRG00000076744) pard6ga (ENSCCRG00000034379) Golden-line barbel MODERN SPECIES 10 PTPN3 (ENSSGRG00000041309) ENSSGRG00000041307 ENSSGRG00000041305 ENSSGRG00000041302 trim35-28 (ENSSGRG00000041295) MEGF8 (ENSSGRG00000041168) ENSSGRG00000041158 ENSSGRG00000041155 arhgef1b (ENSSGRG00000041149) ENSSGRG00000041147 ENSSGRG00000041143 TMEM145 (ENSSGRG00000041135) mrpl17 (ENSSGRG00000041131) ENSSGRG00000041129 ENSSGRG00000041126 #22 irge4 (ENSSGRG00000041125) #22 ENSSGRG00000041123 cblc (ENSSGRG00000041122) ENSSGRG00000040872 nsmce2 (ENSSGRG00000040871) derl1 (ENSSGRG00000040870) zhx2a (ENSSGRG00000040869) fam8a1b (ENSSGRG00000040866) ATXN1 (ENSSGRG00000040865) mylipb (ENSSGRG00000040857) dtnbp1a (ENSSGRG00000040856) JARID2 (ENSSGRG00000040753) zgc:136493 (ENSSGRG00000040748) pard6ga (ENSSGRG00000040747) adnp2a (ENSSGRG00000040746) ZFAT (ENSSGRG00000040744) Cyprininae ANCESTRAL SPECIES 102 ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00940000157292.gc ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a ENSGT00940000159220.c.a ENSGT00940000162740.n Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000164496.a.b.a ENSGT00940000158264.b.e ENSGT00940000155617.B.ec.b.a ENSGT01030000234583.a.a.c.a.a.c.b ENSGT00940000160262.e ENSGT01100000263491.a.b.a.a.a.a.b.n.c.a ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.a.a.b #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a ENSGT00940000159220.c.a ENSGT00940000162740.n Golden-line barbel MODERN SPECIES 174 epb41b (ENSSGRG00000050059) trim35-28 (ENSSGRG00000050051) MEGF8 (ENSSGRG00000050049) ENSSGRG00000050048 ENSSGRG00000050047 arhgef1b (ENSSGRG00000050045) ENSSGRG00000050044 cd79a (ENSSGRG00000050042) LIPE (ENSSGRG00000050040) TMEM145 (ENSSGRG00000050026) mrpl17 (ENSSGRG00000050024) ENSSGRG00000050022 ENSSGRG00000050019 #22 ENSSGRG00000050016 #22 ENSSGRG00000050015 #22 irge4 (ENSSGRG00000050012) #22 ENSSGRG00000050011 cblc (ENSSGRG00000050007) ENSSGRG00000050000 ENSSGRG00000049759 tomm40 (ENSSGRG00000049747) nsmce2 (ENSSGRG00000049746) derl1 (ENSSGRG00000049728) zhx2a (ENSSGRG00000049723) zgc:110410 (ENSSGRG00000049712) fam8a1b (ENSSGRG00000049710) ATXN1 (ENSSGRG00000049709) mylipb (ENSSGRG00000049707) dtnbp1a (ENSSGRG00000049706) JARID2 (ENSSGRG00000049653) zgc:136493 (ENSSGRG00000049652) Common carp reference MODERN SPECIES 2 ENSCCRG00000002777 epb41b (ENSCCRG00000032551) trim35-28 (ENSCCRG00000061884) ENSCCRG00000002667 ENSCCRG00000082177 arhgef1b (ENSCCRG00000009659) cd79a (ENSCCRG00000064586) ENSCCRG00000008989 ENSCCRG00000009753 mrpl17 (ENSCCRG00000069240) ENSCCRG00000008398 ENSCCRG00000073781 ENSCCRG00000009842 #22 ENSCCRG00000080272 #22 ENSCCRG00000009878 #22 irge4 (ENSCCRG00000068891) #22 ENSCCRG00000030413 cblc (ENSCCRG00000072963) ENSCCRG00000058151 ENSCCRG00000006649 nsmce2 (ENSCCRG00000063420) tomm40 (ENSCCRG00000048491) derl1 (ENSCCRG00000065880) zhx2a (ENSCCRG00000012653) zgc:110410 (ENSCCRG00000012659) fam8a1b (ENSCCRG00000019380) ATXN1 (ENSCCRG00000005392) mylipb (ENSCCRG00000005386) dtnbp1a (ENSCCRG00000048747) JARID2 (ENSCCRG00000049112) zgc:136493 (ENSCCRG00000067959) Goldfish MODERN SPECIES 35 rab13 (ENSCARG00000019319) rps27.2 (ENSCARG00000019295) KCNN3 (ENSCARG00000019259) adar (ENSCARG00000018953) snx27b (ENSCARG00000018745) ENSCARG00000018727 s100a10b (ENSCARG00000018720) krtcap2 (ENSCARG00000018700) LIPE (ENSCARG00000018660) TMEM145 (ENSCARG00000018635) ENSCARG00000018628 mrpl17 (ENSCARG00000018619) ENSCARG00000018603 ENSCARG00000018597 #22 ENSCARG00000018593 #22 irge4 (ENSCARG00000018588) #22 ENSCARG00000018585 cblc (ENSCARG00000018567) ENSCARG00000018556 ENSCARG00000017978 tomm40 (ENSCARG00000017811) nsmce2 (ENSCARG00000017790) derl1 (ENSCARG00000017773) zhx2a (ENSCARG00000017767) fam8a1b (ENSCARG00000017754) ATXN1 (ENSCARG00000017748) mylipb (ENSCARG00000017725) dtnbp1a (ENSCARG00000017677) JARID2 (ENSCARG00000017077) zgc:136493 (ENSCARG00000017025) adnp2a (ENSCARG00000016987) Zebrafish MODERN SPECIES 7 epb41b (ENSDARG00000029019) trim35-28 (ENSDARG00000021021) MEGF8 (ENSDARG00000079751) ENSDARG00000086892 arhgef1b (ENSDARG00000055837) cd79a (ENSDARG00000037473) ENSDARG00000111854 ENSDARG00000101145 TMEM145 (ENSDARG00000088342) mrpl17 (ENSDARG00000075677) prss59.2 (ENSDARG00000073742) prss59.1 (ENSDARG00000079274) ENSDARG00000095944 ENSDARG00000014975 ENSDARG00000102281 #22 irge4 (ENSDARG00000070317) #22 ENSDARG00000086847 cblc (ENSDARG00000078217) ENSDARG00000087832 ENSDARG00000018425 tomm40 (ENSDARG00000092112) nsmce2 (ENSDARG00000076379) derl1 (ENSDARG00000021905) zhx2a (ENSDARG00000055162) zgc:110410 (ENSDARG00000055138) fam8a1b (ENSDARG00000004308) ATXN1 (ENSDARG00000060862) mylipb (ENSDARG00000055118) dtnbp1a (ENSDARG00000055115) JARID2 (ENSDARG00000060925) zgc:136493 (ENSDARG00000029259) Characiphysae ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a #22 Channel catfish MODERN SPECIES 5 ENSIPUG00000022287 mycbp (ENSIPUG00000022301) gja9 (ENSIPUG00000022316) ENSIPUG00000022325 slc9a1b (ENSIPUG00000022329) ctss1 (ENSIPUG00000022334) gpd1c (ENSIPUG00000022341) ENSIPUG00000022353 ENSIPUG00000022356 GSTA (ENSIPUG00000022366) IRGC (ENSIPUG00000022382) #22 ENSIPUG00000022385 ENSIPUG00000022390 ENSIPUG00000022401 ENSIPUG00000022486 ENSIPUG00000022491 ENSIPUG00000022499 ENSIPUG00000022507 ENSIPUG00000022510 ENSIPUG00000022521 ENSIPUG00000022524 slc6a18 (ENSIPUG00000022540) tert (ENSIPUG00000022566) nupl2 (ENSIPUG00000022884) cyp51 (ENSIPUG00000022896) FUT9 (ENSIPUG00000022912) Characiphysae_b ANCESTRAL SPECIES 158 ENSGT00940000156411 ENSGT00390000018845.e ENSGT00940000157066.p ENSGT00940000166601 ENSGT00390000008296.b.b ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 ENSGT00390000002955 ENSGT00390000018741 ENSGT00940000153372.A.e.a.b.b ENSGT01030000235124 ENSGT00940000153372.A.e.a.a ENSGT00390000008823 ENSGT00390000009313.ib.b.b.a ENSGT00950000183007.b.e.b.a #22 ENSGT00390000009313.ib.b.a ENSGT00390000001566 ENSGT00940000157449 ENSGT00940000167600 ENSGT00940000159129 ENSGT00940000156170 ENSGT01030000234618.E.m ENSGT01030000234618.E.l Characoidei DUPLICATION Characoidei ANCESTRAL SPECIES 686 ENSGT00390000009313.ib.b.b.a ENSGT00950000183007.b.e.b.a.c #22 Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 755 ENSPNAG00000012840 #22 irge4 (ENSPNAG00000012863) #22 ENSPNAG00000002523 vmo1b (ENSPNAG00000002536) ENSPNAG00000013070 ENSPNAG00000013086 Red-bellied piranha MODERN SPECIES 755 ENSPNAG00000012840 #22 irge4 (ENSPNAG00000012863) #22 ENSPNAG00000002523 vmo1b (ENSPNAG00000002536) ENSPNAG00000013070 ENSPNAG00000013086 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000032351 NARS1 (ENSAMXG00000009766) txnl1 (ENSAMXG00000037917) ENSAMXG00000038338 TCF4 (ENSAMXG00000009833) ENSAMXG00000009861 RAB27B (ENSAMXG00000032740) wdr91 (ENSAMXG00000009885) ENSAMXG00000044107 ENSAMXG00000043302 ENSAMXG00000032249 naga (ENSAMXG00000038549) ENSAMXG00000031358 ENSAMXG00000033538 vmo1b (ENSAMXG00000034013) irge4 (ENSAMXG00000025551) #22 ENSAMXG00000037024 ENSAMXG00000034291 zgc:152948 (ENSAMXG00000009972) ENSAMXG00000009983 ENSAMXG00000035071 ENSAMXG00000033026 ENSAMXG00000035870 C18orf32 (ENSAMXG00000042878) RIC1 (ENSAMXG00000018162) ERMP1 (ENSAMXG00000018167) MLANA (ENSAMXG00000018171) KIAA2026 (ENSAMXG00000018174) ENSAMXG00000018189 oaz1b (ENSAMXG00000037015) PRAG1 (ENSAMXG00000036944) Characoidei ANCESTRAL SPECIES 67 ENSGT00390000010767 ENSGT01050000244840.A.b.b.b ENSGT00390000016384.l.a ENSGT00390000014052 ENSGT00390000006265.b.c ENSGT00940000159607 ENSGT00390000000529 ENSGT01050000244898.b.b.e.b ENSGT00940000157321 ENSGT00940000156290.b ENSGT00390000016526 ENSGT00940000155373 ENSGT00950000183047.d.e ENSGT00940000159211.C.jb.b ENSGT00940000156959.A.c.a ENSGT00950000183007.b.e.b.a.d #22 ENSGT00390000014118 ENSGT00390000017382 ENSGT00390000006452.b.a ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00940000157603.hb ENSGT00390000009710 ENSGT00940000159952.a.b ENSGT00390000017026 ENSGT00940000157817 ENSGT00730000111121 ENSGT00390000001362.b ENSGT00940000161125 ENSGT00940000163793.A.a ENSGT01050000244840.A.a.a.h.b Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Red-bellied piranha MODERN SPECIES 450 olfm1b (ENSPNAG00000000212) ENSPNAG00000000207 #22 irge4 (ENSPNAG00000007452) #22 irge4 (ENSPNAG00000029024) #22 irge4 (ENSPNAG00000028764) #22 ENSPNAG00000028650 #22 irge4 (ENSPNAG00000027789) #22 ppp1r26 (ENSPNAG00000004256) mrps2 (ENSPNAG00000027757) dipk1b (ENSPNAG00000027737) agpat2 (ENSPNAG00000027728) egfl7 (ENSPNAG00000027684) AP3B1 (ENSPNAG00000007098) Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 5 ENSAMXG00000043815 mob1bb (ENSAMXG00000042689) dck (ENSAMXG00000013318) SLC4A4 (ENSAMXG00000013324) fpgs (ENSAMXG00000043064) cdk9 (ENSAMXG00000013366) FNBP1 (ENSAMXG00000013371) ENSAMXG00000024835 taf10 (ENSAMXG00000000178) ENSAMXG00000030406 COL5A1 (ENSAMXG00000006785) olfm1b (ENSAMXG00000007004) ENSAMXG00000041042 ENSAMXG00000031909 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000007021 #22 ENSAMXG00000033649 #22 ENSAMXG00000018938 #22 ENSAMXG00000043797 #22 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000030887 ENSAMXG00000040429 fnip1 (ENSAMXG00000000950) ENSAMXG00000010601 irf1b (ENSAMXG00000010595) ENSAMXG00000036808 ENSAMXG00000037303 slc22a4 (ENSAMXG00000038161) ENSAMXG00000010591 ENSAMXG00000010589 ODF2 (ENSAMXG00000010588) Mexicana tetra MODERN SPECIES 5 mob1bb (ENSAMXG00000042689) dck (ENSAMXG00000013318) SLC4A4 (ENSAMXG00000013324) fpgs (ENSAMXG00000043064) cdk9 (ENSAMXG00000013366) FNBP1 (ENSAMXG00000013371) ENSAMXG00000024835 taf10 (ENSAMXG00000000178) ENSAMXG00000030406 COL5A1 (ENSAMXG00000006785) olfm1b (ENSAMXG00000007004) ENSAMXG00000041042 ENSAMXG00000031909 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000007021 #22 ENSAMXG00000033649 #22 ENSAMXG00000018938 #22 ENSAMXG00000043797 #22 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000030887 ENSAMXG00000040429 fnip1 (ENSAMXG00000000950) ENSAMXG00000010601 irf1b (ENSAMXG00000010595) ENSAMXG00000036808 ENSAMXG00000037303 slc22a4 (ENSAMXG00000038161) ENSAMXG00000010591 ENSAMXG00000010589 ODF2 (ENSAMXG00000010588) sptan1 (ENSAMXG00000010528) Mexicana tetra MODERN SPECIES 1176 ENSAMXG00000033483 irge4 (ENSAMXG00000025169) #22 ENSAMXG00000037767 #22 irge4 (ENSAMXG00000041276) #22 Mexicana tetra MODERN SPECIES 5 dck (ENSAMXG00000013318) SLC4A4 (ENSAMXG00000013324) fpgs (ENSAMXG00000043064) cdk9 (ENSAMXG00000013366) FNBP1 (ENSAMXG00000013371) ENSAMXG00000024835 taf10 (ENSAMXG00000000178) ENSAMXG00000030406 COL5A1 (ENSAMXG00000006785) olfm1b (ENSAMXG00000007004) ENSAMXG00000041042 ENSAMXG00000031909 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000007021 #22 ENSAMXG00000033649 #22 ENSAMXG00000018938 #22 ENSAMXG00000043797 #22 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000030887 ENSAMXG00000040429 fnip1 (ENSAMXG00000000950) ENSAMXG00000010601 irf1b (ENSAMXG00000010595) ENSAMXG00000036808 ENSAMXG00000037303 slc22a4 (ENSAMXG00000038161) ENSAMXG00000010591 ENSAMXG00000010589 ODF2 (ENSAMXG00000010588) sptan1 (ENSAMXG00000010528) dync2i2 (ENSAMXG00000010491) Mexicana tetra MODERN SPECIES 5 SLC4A4 (ENSAMXG00000013324) fpgs (ENSAMXG00000043064) cdk9 (ENSAMXG00000013366) FNBP1 (ENSAMXG00000013371) ENSAMXG00000024835 taf10 (ENSAMXG00000000178) ENSAMXG00000030406 COL5A1 (ENSAMXG00000006785) olfm1b (ENSAMXG00000007004) ENSAMXG00000041042 ENSAMXG00000031909 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000007021 #22 ENSAMXG00000033649 #22 ENSAMXG00000018938 #22 ENSAMXG00000043797 #22 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000030887 ENSAMXG00000040429 fnip1 (ENSAMXG00000000950) ENSAMXG00000010601 irf1b (ENSAMXG00000010595) ENSAMXG00000036808 ENSAMXG00000037303 slc22a4 (ENSAMXG00000038161) ENSAMXG00000010591 ENSAMXG00000010589 ODF2 (ENSAMXG00000010588) sptan1 (ENSAMXG00000010528) dync2i2 (ENSAMXG00000010491) setb (ENSAMXG00000039614) Mexicana tetra MODERN SPECIES 1176 ENSAMXG00000033483 irge4 (ENSAMXG00000025169) #22 ENSAMXG00000037767 #22 irge4 (ENSAMXG00000041276) #22 Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 1176 irge4 (ENSAMXG00000041276) #22 ENSAMXG00000037767 #22 irge4 (ENSAMXG00000025169) #22 ENSAMXG00000033483 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000036729 REXO4 (ENSAMXG00000013291) ENSAMXG00000043815 mob1bb (ENSAMXG00000042689) dck (ENSAMXG00000013318) SLC4A4 (ENSAMXG00000013324) fpgs (ENSAMXG00000043064) cdk9 (ENSAMXG00000013366) FNBP1 (ENSAMXG00000013371) ENSAMXG00000024835 taf10 (ENSAMXG00000000178) ENSAMXG00000030406 COL5A1 (ENSAMXG00000006785) olfm1b (ENSAMXG00000007004) ENSAMXG00000041042 ENSAMXG00000031909 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000007021 #22 ENSAMXG00000033649 #22 ENSAMXG00000018938 #22 ENSAMXG00000043797 #22 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000030887 ENSAMXG00000040429 fnip1 (ENSAMXG00000000950) ENSAMXG00000010601 irf1b (ENSAMXG00000010595) ENSAMXG00000036808 ENSAMXG00000037303 slc22a4 (ENSAMXG00000038161) ENSAMXG00000010591 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000010589 ENSAMXG00000010591 slc22a4 (ENSAMXG00000038161) ENSAMXG00000037303 ENSAMXG00000036808 irf1b (ENSAMXG00000010595) ENSAMXG00000010601 fnip1 (ENSAMXG00000000950) ENSAMXG00000040429 ENSAMXG00000030887 ppp1r26 (ENSAMXG00000035528) ENSAMXG00000043797 #22 ENSAMXG00000018938 #22 ENSAMXG00000033649 #22 ENSAMXG00000007021 #22 irge4 (ENSAMXG00000038534) #22 ENSAMXG00000031909 #22 ENSAMXG00000041042 olfm1b (ENSAMXG00000007004) COL5A1 (ENSAMXG00000006785) ENSAMXG00000030406 taf10 (ENSAMXG00000000178) ENSAMXG00000024835 FNBP1 (ENSAMXG00000013371) cdk9 (ENSAMXG00000013366) fpgs (ENSAMXG00000043064) SLC4A4 (ENSAMXG00000013324) dck (ENSAMXG00000013318) mob1bb (ENSAMXG00000042689) ENSAMXG00000043815 REXO4 (ENSAMXG00000013291) Electric eel MODERN SPECIES 1022 ENSEEEG00000011131 ENSEEEG00000011132 zgc:152948 (ENSEEEG00000011135) ENSEEEG00000011137 irge4 (ENSEEEG00000011139) #22 ENSEEEG00000011140 wdr91 (ENSEEEG00000011142) RAB27B (ENSEEEG00000011146) Clupeiformes ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.a #22 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 15 ENSCHAG00000002080 ENSCHAG00000002029 ENSCHAG00000001948 ENSCHAG00000001872 ENSCHAG00000001844 ENSCHAG00000001535 ENSCHAG00000001498 ENSCHAG00000001416 ENSCHAG00000001412 ENSCHAG00000001382 ENSCHAG00000001303 ENSCHAG00000001293 #22 ENSCHAG00000001288 #22 ENSCHAG00000001280 #22 ENSCHAG00000001268 ENSCHAG00000001248 #22 ENSCHAG00000001221 #22 ENSCHAG00000001211 #22 ENSCHAG00000001160 #22 ENSCHAG00000001079 #22 ENSCHAG00000001048 ENSCHAG00000000995 ENSCHAG00000000962 #22 ENSCHAG00000000935 ENSCHAG00000000921 ENSCHAG00000000818 ENSCHAG00000000698 dcakd (ENSCHAG00000024531) C1QL1 (ENSCHAG00000024523) ENSCHAG00000024517 ENSCHAG00000024512 Atlantic herring MODERN SPECIES 15 C1QL1 (ENSCHAG00000024523) dcakd (ENSCHAG00000024531) ENSCHAG00000000698 ENSCHAG00000000818 ENSCHAG00000000921 ENSCHAG00000000935 ENSCHAG00000000962 #22 ENSCHAG00000000995 ENSCHAG00000001048 ENSCHAG00000001079 #22 ENSCHAG00000001160 #22 ENSCHAG00000001211 #22 ENSCHAG00000001221 #22 ENSCHAG00000001248 #22 ENSCHAG00000001268 ENSCHAG00000001280 #22 ENSCHAG00000001288 #22 ENSCHAG00000001293 #22 ENSCHAG00000001303 ENSCHAG00000001382 ENSCHAG00000001412 ENSCHAG00000001416 ENSCHAG00000001498 ENSCHAG00000001535 ENSCHAG00000001844 ENSCHAG00000001872 ENSCHAG00000001948 ENSCHAG00000002029 ENSCHAG00000002080 ENSCHAG00000002094 cox10 (ENSCHAG00000002105) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 15 ENSCHAG00000000698 ENSCHAG00000000818 ENSCHAG00000000921 ENSCHAG00000000935 ENSCHAG00000000962 #22 ENSCHAG00000000995 ENSCHAG00000001048 ENSCHAG00000001079 #22 ENSCHAG00000001160 #22 ENSCHAG00000001211 #22 ENSCHAG00000001221 #22 ENSCHAG00000001248 #22 ENSCHAG00000001268 ENSCHAG00000001280 #22 ENSCHAG00000001288 #22 ENSCHAG00000001293 #22 ENSCHAG00000001303 ENSCHAG00000001382 ENSCHAG00000001412 ENSCHAG00000001416 ENSCHAG00000001498 ENSCHAG00000001535 ENSCHAG00000001844 ENSCHAG00000001872 ENSCHAG00000001948 ENSCHAG00000002029 ENSCHAG00000002080 ENSCHAG00000002094 cox10 (ENSCHAG00000002105) hs3st3b1b (ENSCHAG00000002118) pmp22b (ENSCHAG00000002134) Atlantic herring MODERN SPECIES 15 hs3st3b1b (ENSCHAG00000002118) cox10 (ENSCHAG00000002105) ENSCHAG00000002094 ENSCHAG00000002080 ENSCHAG00000002029 ENSCHAG00000001948 ENSCHAG00000001872 ENSCHAG00000001844 ENSCHAG00000001535 ENSCHAG00000001498 ENSCHAG00000001416 ENSCHAG00000001412 ENSCHAG00000001382 ENSCHAG00000001303 ENSCHAG00000001293 #22 ENSCHAG00000001288 #22 ENSCHAG00000001280 #22 ENSCHAG00000001268 ENSCHAG00000001248 #22 ENSCHAG00000001221 #22 ENSCHAG00000001211 #22 ENSCHAG00000001160 #22 ENSCHAG00000001079 #22 ENSCHAG00000001048 ENSCHAG00000000995 ENSCHAG00000000962 #22 ENSCHAG00000000935 ENSCHAG00000000921 ENSCHAG00000000818 ENSCHAG00000000698 dcakd (ENSCHAG00000024531) Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 15 SRCIN1 (ENSCHAG00000021577) FMNL1 (ENSCHAG00000021721) ccr10 (ENSCHAG00000024491) ENSCHAG00000024495 ENSCHAG00000024500 ENSCHAG00000024501 ENSCHAG00000024506 ENSCHAG00000024512 ENSCHAG00000024517 C1QL1 (ENSCHAG00000024523) dcakd (ENSCHAG00000024531) ENSCHAG00000000698 ENSCHAG00000000818 ENSCHAG00000000921 ENSCHAG00000000935 ENSCHAG00000000962 #22 ENSCHAG00000000995 ENSCHAG00000001048 ENSCHAG00000001079 #22 ENSCHAG00000001160 #22 ENSCHAG00000001211 #22 ENSCHAG00000001221 #22 ENSCHAG00000001248 #22 ENSCHAG00000001268 ENSCHAG00000001280 #22 ENSCHAG00000001288 #22 ENSCHAG00000001293 #22 ENSCHAG00000001303 ENSCHAG00000001382 ENSCHAG00000001412 ENSCHAG00000001416 Atlantic herring MODERN SPECIES 15 ENSCHAG00000002029 ENSCHAG00000001948 ENSCHAG00000001872 ENSCHAG00000001844 ENSCHAG00000001535 ENSCHAG00000001498 ENSCHAG00000001416 ENSCHAG00000001412 ENSCHAG00000001382 ENSCHAG00000001303 ENSCHAG00000001293 #22 ENSCHAG00000001288 #22 ENSCHAG00000001280 #22 ENSCHAG00000001268 ENSCHAG00000001248 #22 ENSCHAG00000001221 #22 ENSCHAG00000001211 #22 ENSCHAG00000001160 #22 ENSCHAG00000001079 #22 ENSCHAG00000001048 ENSCHAG00000000995 ENSCHAG00000000962 #22 ENSCHAG00000000935 ENSCHAG00000000921 ENSCHAG00000000818 ENSCHAG00000000698 dcakd (ENSCHAG00000024531) C1QL1 (ENSCHAG00000024523) ENSCHAG00000024517 ENSCHAG00000024512 ENSCHAG00000024506 Atlantic herring MODERN SPECIES 15 ENSCHAG00000024500 ENSCHAG00000024501 ENSCHAG00000024506 ENSCHAG00000024512 ENSCHAG00000024517 C1QL1 (ENSCHAG00000024523) dcakd (ENSCHAG00000024531) ENSCHAG00000000698 ENSCHAG00000000818 ENSCHAG00000000921 ENSCHAG00000000935 ENSCHAG00000000962 #22 ENSCHAG00000000995 ENSCHAG00000001048 ENSCHAG00000001079 #22 ENSCHAG00000001160 #22 ENSCHAG00000001211 #22 ENSCHAG00000001221 #22 ENSCHAG00000001248 #22 ENSCHAG00000001268 ENSCHAG00000001280 #22 ENSCHAG00000001288 #22 ENSCHAG00000001293 #22 ENSCHAG00000001303 ENSCHAG00000001382 ENSCHAG00000001412 ENSCHAG00000001416 ENSCHAG00000001498 ENSCHAG00000001535 ENSCHAG00000001844 ENSCHAG00000001872 Atlantic herring MODERN SPECIES 15 ENSCHAG00000024495 ENSCHAG00000024500 ENSCHAG00000024501 ENSCHAG00000024506 ENSCHAG00000024512 ENSCHAG00000024517 C1QL1 (ENSCHAG00000024523) dcakd (ENSCHAG00000024531) ENSCHAG00000000698 ENSCHAG00000000818 ENSCHAG00000000921 ENSCHAG00000000935 ENSCHAG00000000962 #22 ENSCHAG00000000995 ENSCHAG00000001048 ENSCHAG00000001079 #22 ENSCHAG00000001160 #22 ENSCHAG00000001211 #22 ENSCHAG00000001221 #22 ENSCHAG00000001248 #22 ENSCHAG00000001268 ENSCHAG00000001280 #22 ENSCHAG00000001288 #22 ENSCHAG00000001293 #22 ENSCHAG00000001303 ENSCHAG00000001382 ENSCHAG00000001412 ENSCHAG00000001416 ENSCHAG00000001498 ENSCHAG00000001535 ENSCHAG00000001844 Atlantic herring MODERN SPECIES 15 ENSCHAG00000001948 ENSCHAG00000001872 ENSCHAG00000001844 ENSCHAG00000001535 ENSCHAG00000001498 ENSCHAG00000001416 ENSCHAG00000001412 ENSCHAG00000001382 ENSCHAG00000001303 ENSCHAG00000001293 #22 ENSCHAG00000001288 #22 ENSCHAG00000001280 #22 ENSCHAG00000001268 ENSCHAG00000001248 #22 ENSCHAG00000001221 #22 ENSCHAG00000001211 #22 ENSCHAG00000001160 #22 ENSCHAG00000001079 #22 ENSCHAG00000001048 ENSCHAG00000000995 ENSCHAG00000000962 #22 ENSCHAG00000000935 ENSCHAG00000000921 ENSCHAG00000000818 ENSCHAG00000000698 dcakd (ENSCHAG00000024531) C1QL1 (ENSCHAG00000024523) ENSCHAG00000024517 ENSCHAG00000024512 ENSCHAG00000024506 ENSCHAG00000024501 Atlantic herring MODERN SPECIES 15 qki2 (ENSCHAG00000021094) timm23a (ENSCHAG00000021072) zgc:112285 (ENSCHAG00000021042) SYT15 (ENSCHAG00000021021) si:dkey-21e13.3 (ENSCHAG00000021011) ENSCHAG00000020936 ENSCHAG00000019350 CAMK2G (ENSCHAG00000018622) sec24c (ENSCHAG00000015829) ENSCHAG00000015729 ENSCHAG00000015714 ENSCHAG00000015513 ENSCHAG00000015486 nod2 (ENSCHAG00000015313) ENSCHAG00000015300 ENSCHAG00000015275 #22 ENSCHAG00000015249 ENSCHAG00000015074 ENSCHAG00000015033 ENSCHAG00000015027 ENSCHAG00000014999 ENSCHAG00000014940 pus3 (ENSCHAG00000014933) SLC18A3 (ENSCHAG00000014922) CHAT (ENSCHAG00000014507) ENSCHAG00000014489 ENSCHAG00000014327 ENSCHAG00000014133 ENSCHAG00000014115 ENSCHAG00000013921 ENSCHAG00000013869 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 11 lipf (ENSDCDG00000032994) rnls (ENSDCDG00000032993) rnls (ENSDCDG00000032991) ptenb (ENSDCDG00000032985) atad1b (ENSDCDG00000032983) papss2b (ENSDCDG00000032633) minpp1b (ENSDCDG00000032616) ENSDCDG00000032614 ENSDCDG00000032613 sgms1b (ENSDCDG00000032611) asah2 (ENSDCDG00000032534) A1CF (ENSDCDG00000032513) PRKG1 (ENSDCDG00000032502) dkk1b (ENSDCDG00000032493) ENSDCDG00000032492 #22 irge4 (ENSDCDG00000032491) #22 pcdh15b (ENSDCDG00000032199) ipmkb (ENSDCDG00000032174) CDR2L (ENSDCDG00000032171) si:ch211-110e21.3 (ENSDCDG00000032168) sap30bp (ENSDCDG00000032163) itgb4 (ENSDCDG00000031400) zgc:194990 (ENSDCDG00000031361) ENSDCDG00000031358 ENSDCDG00000031354 galk1 (ENSDCDG00000031349) ENSDCDG00000027826 mtr (ENSDCDG00000027195) ENSDCDG00000025923 CHRM3 (ENSDCDG00000025758) FMN2 (ENSDCDG00000025756) Denticle herring MODERN SPECIES 11 ankrd22 (ENSDCDG00000032999) lipf (ENSDCDG00000032994) rnls (ENSDCDG00000032993) rnls (ENSDCDG00000032991) ptenb (ENSDCDG00000032985) atad1b (ENSDCDG00000032983) papss2b (ENSDCDG00000032633) minpp1b (ENSDCDG00000032616) ENSDCDG00000032614 ENSDCDG00000032613 sgms1b (ENSDCDG00000032611) asah2 (ENSDCDG00000032534) A1CF (ENSDCDG00000032513) PRKG1 (ENSDCDG00000032502) dkk1b (ENSDCDG00000032493) ENSDCDG00000032492 #22 irge4 (ENSDCDG00000032491) #22 pcdh15b (ENSDCDG00000032199) ipmkb (ENSDCDG00000032174) CDR2L (ENSDCDG00000032171) si:ch211-110e21.3 (ENSDCDG00000032168) sap30bp (ENSDCDG00000032163) itgb4 (ENSDCDG00000031400) zgc:194990 (ENSDCDG00000031361) ENSDCDG00000031358 ENSDCDG00000031354 galk1 (ENSDCDG00000031349) ENSDCDG00000027826 mtr (ENSDCDG00000027195) ENSDCDG00000025923 CHRM3 (ENSDCDG00000025758) Otomorpha ANCESTRAL SPECIES 730 ENSGT01050000244883.B.c.b ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 Otophysi ANCESTRAL SPECIES ENSGT00950000183007.b.e.b.b #22 Cyprinoidei ANCESTRAL SPECIES 13 ENSGT00940000158331 ENSGT00940000157888 ENSGT00940000164496.a.b ENSGT00940000158264.b ENSGT01030000234583.a.a.c.a.a ENSGT00940000160262 ENSGT01100000263491.a.b.a.a.a.a.b.n ENSGT00940000163212.B ENSGT00940000161180 ENSGT00940000154363.A.c ENSGT00730000111056.g ENSGT00940000153981.B ENSGT00390000010698 ENSGT01050000244883.B.d ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 ENSGT00950000183007.b.e.b.a.b #22 ENSGT00940000165579.a.a.a ENSGT00940000156631.A ENSGT00940000161392 ENSGT00940000165835.a ENSGT00390000003308.a.a ENSGT00940000164859 ENSGT00530000063156.b ENSGT00950000182893.a.a.a.b.c ENSGT01050000244890.b ENSGT00390000007346.a ENSGT00390000005939.a.a.b ENSGT00940000156206.f ENSGT00940000156479.a ENSGT00940000159220.c Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 102 ENSGT00530000063698.b.d ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00940000157292.gc ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a ENSGT00940000159220.c.a Goldfish MODERN SPECIES 35 ENSCARG00000019376 rab13 (ENSCARG00000019319) rps27.2 (ENSCARG00000019295) KCNN3 (ENSCARG00000019259) adar (ENSCARG00000018953) snx27b (ENSCARG00000018745) ENSCARG00000018727 s100a10b (ENSCARG00000018720) krtcap2 (ENSCARG00000018700) LIPE (ENSCARG00000018660) TMEM145 (ENSCARG00000018635) ENSCARG00000018628 mrpl17 (ENSCARG00000018619) ENSCARG00000018603 ENSCARG00000018597 #22 ENSCARG00000018593 #22 irge4 (ENSCARG00000018588) #22 ENSCARG00000018585 cblc (ENSCARG00000018567) ENSCARG00000018556 ENSCARG00000017978 tomm40 (ENSCARG00000017811) nsmce2 (ENSCARG00000017790) derl1 (ENSCARG00000017773) zhx2a (ENSCARG00000017767) fam8a1b (ENSCARG00000017754) ATXN1 (ENSCARG00000017748) mylipb (ENSCARG00000017725) dtnbp1a (ENSCARG00000017677) JARID2 (ENSCARG00000017077) zgc:136493 (ENSCARG00000017025) Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000158331.d ENSGT00940000157888.e.b ENSGT00940000164496.a.b.a ENSGT00940000158264.b.e ENSGT00940000155617.B.ec.b.a ENSGT01030000234583.a.a.c.a.a.c.b ENSGT00940000160262.e ENSGT01100000263491.a.b.a.a.a.a.b.n.c.a ENSGT00940000161180.q ENSGT00940000154363.A.c ENSGT00730000111056.g.a ENSGT00940000153981.B.a ENSGT00390000010698.v ENSGT01050000244883.B.d.e.b ENSGT00950000183007.b.e.a.d #22 ENSGT00950000183007.b.e.b.b.a #22 ENSGT00950000183007.b.e.b.a.a.a.b #22 ENSGT00950000183007.b.e.b.a.b.b #22 ENSGT00940000165579.a.a.a.b ENSGT00940000156631.A.a ENSGT00940000161392.h ENSGT00940000165835.a.a ENSGT00390000003308.a.a.b ENSGT00940000164859.h ENSGT00530000063156.b.h ENSGT00950000182893.a.a.a.b.c.c ENSGT01050000244890.b ENSGT00390000007346.a.h ENSGT00390000005939.a.a.b.e ENSGT00940000156206.f.a ENSGT00940000156479.a.a Common carp reference MODERN SPECIES 2 ENSCCRG00000023139 ENSCCRG00000057817 ENSCCRG00000002777 epb41b (ENSCCRG00000032551) trim35-28 (ENSCCRG00000061884) ENSCCRG00000002667 ENSCCRG00000082177 arhgef1b (ENSCCRG00000009659) cd79a (ENSCCRG00000064586) ENSCCRG00000008989 ENSCCRG00000009753 mrpl17 (ENSCCRG00000069240) ENSCCRG00000008398 ENSCCRG00000073781 ENSCCRG00000009842 #22 ENSCCRG00000080272 #22 ENSCCRG00000009878 #22 irge4 (ENSCCRG00000068891) #22 ENSCCRG00000030413 cblc (ENSCCRG00000072963) ENSCCRG00000058151 ENSCCRG00000006649 nsmce2 (ENSCCRG00000063420) tomm40 (ENSCCRG00000048491) derl1 (ENSCCRG00000065880) zhx2a (ENSCCRG00000012653) zgc:110410 (ENSCCRG00000012659) fam8a1b (ENSCCRG00000019380) ATXN1 (ENSCCRG00000005392) mylipb (ENSCCRG00000005386) dtnbp1a (ENSCCRG00000048747) Golden-line barbel MODERN SPECIES 174 ENSSGRG00000050096 ENSSGRG00000050082 epb41b (ENSSGRG00000050059) trim35-28 (ENSSGRG00000050051) MEGF8 (ENSSGRG00000050049) ENSSGRG00000050048 ENSSGRG00000050047 arhgef1b (ENSSGRG00000050045) ENSSGRG00000050044 cd79a (ENSSGRG00000050042) LIPE (ENSSGRG00000050040) TMEM145 (ENSSGRG00000050026) mrpl17 (ENSSGRG00000050024) ENSSGRG00000050022 ENSSGRG00000050019 #22 ENSSGRG00000050016 #22 ENSSGRG00000050015 #22 irge4 (ENSSGRG00000050012) #22 ENSSGRG00000050011 cblc (ENSSGRG00000050007) ENSSGRG00000050000 ENSSGRG00000049759 tomm40 (ENSSGRG00000049747) nsmce2 (ENSSGRG00000049746) derl1 (ENSSGRG00000049728) zhx2a (ENSSGRG00000049723) zgc:110410 (ENSSGRG00000049712) fam8a1b (ENSSGRG00000049710) ATXN1 (ENSSGRG00000049709) mylipb (ENSSGRG00000049707) dtnbp1a (ENSSGRG00000049706) Cyprininae ANCESTRAL SPECIES 7 ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b ENSGT00940000162740.m Goldfish MODERN SPECIES 7 ENSCARG00000067648 ENSCARG00000067659 epb41b (ENSCARG00000067745) trim35-28 (ENSCARG00000067772) MEGF8 (ENSCARG00000067792) ENSCARG00000067894 ENSCARG00000067899 arhgef1b (ENSCARG00000050441) cd79a (ENSCARG00000051143) ENSCARG00000051233 TMEM145 (ENSCARG00000051331) mrpl17 (ENSCARG00000051380) ENSCARG00000051441 ENSCARG00000051579 #22 ENSCARG00000051645 #22 ENSCARG00000051649 #22 ENSCARG00000051662 #22 irge4 (ENSCARG00000051668) #22 ENSCARG00000051676 cblc (ENSCARG00000051684) ENSCARG00000051775 ENSCARG00000051893 tomm40 (ENSCARG00000053910) nsmce2 (ENSCARG00000054030) derl1 (ENSCARG00000054069) zhx2a (ENSCARG00000054124) zgc:110410 (ENSCARG00000054138) fam8a1b (ENSCARG00000054263) ATXN1 (ENSCARG00000054288) mylipb (ENSCARG00000054323) dtnbp1a (ENSCARG00000054340) Cyprininae_a ANCESTRAL SPECIES 6 ENSGT00530000063698.b.d ENSGT00940000155617.B.ec.b.b ENSGT01030000234583.a.a.c.a.a.c.a ENSGT00940000160262.f ENSGT01100000263491.a.b.a.a.a.a.b.n.c.b ENSGT00940000157292.gc ENSGT00940000163212.B ENSGT00940000161180.r ENSGT00990000210261 ENSGT00730000111056.g.b ENSGT00940000153981.B.b ENSGT00390000010698.u ENSGT01050000244883.B.d.e.a.a ENSGT00950000183007.b.e.a.c.a #22 ENSGT00950000183007.b.e.a.c.b #22 ENSGT00950000183007.b.e.b.b.b #22 ENSGT00950000183007.b.e.b.a.b.a #22 ENSGT00940000165579.a.a.a.a ENSGT00940000156631.A.b ENSGT00940000161392.g ENSGT00940000165835.a.b ENSGT00390000003308.a.a.a ENSGT00940000164859.g ENSGT00530000063156.b.g ENSGT00950000182893.a.a.a.b.c.d ENSGT00390000007346.a.g ENSGT00390000005939.a.a.b.f ENSGT00940000156206.f.b ENSGT00940000156479.a.b ENSGT00940000159220.c.b ENSGT00940000162740.m Common carp reference MODERN SPECIES 47 ENSCCRG00000023640 ENSCCRG00000026250 sgk2b (ENSCCRG00000072590) ENSCCRG00000004316 ENSCCRG00000053063 epb41b (ENSCCRG00000002741) trim35-28 (ENSCCRG00000002728) ENSCCRG00000023727 ENSCCRG00000055639 arhgef1b (ENSCCRG00000008922) ENSCCRG00000069562 mrpl17 (ENSCCRG00000009825) ENSCCRG00000009853 ENSCCRG00000009868 #22 ENSCCRG00000009871 #22 ENSCCRG00000009875 #22 irge4 (ENSCCRG00000009881) #22 ENSCCRG00000019388 cblc (ENSCCRG00000019391) ENSCCRG00000073323 ENSCCRG00000081953 tomm40 (ENSCCRG00000005967) nsmce2 (ENSCCRG00000005947) derl1 (ENSCCRG00000057981) zhx2a (ENSCCRG00000005927) fam8a1b (ENSCCRG00000072609) ENSCCRG00000048756 mylipb (ENSCCRG00000048753) ENSCCRG00000048730 dtnbp1a (ENSCCRG00000077798) zgc:136493 (ENSCCRG00000076744) Golden-line barbel MODERN SPECIES 10 EPB41L4B (ENSSGRG00000041364) PTPN3 (ENSSGRG00000041309) ENSSGRG00000041307 ENSSGRG00000041305 ENSSGRG00000041302 trim35-28 (ENSSGRG00000041295) MEGF8 (ENSSGRG00000041168) ENSSGRG00000041158 ENSSGRG00000041155 arhgef1b (ENSSGRG00000041149) ENSSGRG00000041147 ENSSGRG00000041143 TMEM145 (ENSSGRG00000041135) mrpl17 (ENSSGRG00000041131) ENSSGRG00000041129 ENSSGRG00000041126 #22 irge4 (ENSSGRG00000041125) #22 ENSSGRG00000041123 cblc (ENSSGRG00000041122) ENSSGRG00000040872 nsmce2 (ENSSGRG00000040871) derl1 (ENSSGRG00000040870) zhx2a (ENSSGRG00000040869) fam8a1b (ENSSGRG00000040866) ATXN1 (ENSSGRG00000040865) mylipb (ENSSGRG00000040857) dtnbp1a (ENSSGRG00000040856) JARID2 (ENSSGRG00000040753) zgc:136493 (ENSSGRG00000040748) pard6ga (ENSSGRG00000040747) adnp2a (ENSSGRG00000040746) Zebrafish MODERN SPECIES 7 ENSDARG00000074346 epb41b (ENSDARG00000029019) trim35-28 (ENSDARG00000021021) MEGF8 (ENSDARG00000079751) ENSDARG00000086892 arhgef1b (ENSDARG00000055837) cd79a (ENSDARG00000037473) ENSDARG00000111854 ENSDARG00000101145 TMEM145 (ENSDARG00000088342) mrpl17 (ENSDARG00000075677) prss59.2 (ENSDARG00000073742) prss59.1 (ENSDARG00000079274) ENSDARG00000095944 ENSDARG00000014975 ENSDARG00000102281 #22 irge4 (ENSDARG00000070317) #22 ENSDARG00000086847 cblc (ENSDARG00000078217) ENSDARG00000087832 ENSDARG00000018425 tomm40 (ENSDARG00000092112) nsmce2 (ENSDARG00000076379) derl1 (ENSDARG00000021905) zhx2a (ENSDARG00000055162) zgc:110410 (ENSDARG00000055138) fam8a1b (ENSDARG00000004308) ATXN1 (ENSDARG00000060862) mylipb (ENSDARG00000055118) dtnbp1a (ENSDARG00000055115) JARID2 (ENSDARG00000060925) Clupeiformes ANCESTRAL SPECIES 758 ENSGT01050000244883.B.c.b ENSGT00950000183007.b.e.a #22 ENSGT00950000183007.b.e.b.b #22 Atlantic herring MODERN SPECIES 2 arhgef1b (ENSCHAG00000002148) cd79a (ENSCHAG00000003712) ENSCHAG00000003726 TMEM145 (ENSCHAG00000003842) mrpl17 (ENSCHAG00000004463) ENSCHAG00000004486 ENSCHAG00000004525 ENSCHAG00000004562 ENSCHAG00000004625 ENSCHAG00000004933 ENSCHAG00000005102 #22 ENSCHAG00000005120 #22 ENSCHAG00000005142 #22 ENSCHAG00000005160 #22 ENSCHAG00000005176 #22 ENSCHAG00000005196 #22 ENSCHAG00000005225 ENSCHAG00000005284 cblc (ENSCHAG00000005311) ENSCHAG00000005441 ENSCHAG00000005465 tomm40 (ENSCHAG00000006057) ENSCHAG00000006267 ENSCHAG00000006327 ENSCHAG00000006432 ENSCHAG00000006609 ENSCHAG00000006710 ENSCHAG00000006765 ENSCHAG00000006789 ENSCHAG00000006797 ENSCHAG00000006839 Clupeocephala ANCESTRAL SPECIES ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01100000263535.b.a.a.a.a.c.a ENSGT01100000263535.b.a.a.a.b.a ENSGT01100000263535.b.a.a.a.b.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00390000003568 ENSGT00940000163304 ENSGT01100000263586 ENSGT01030000235814 ENSGT00950000182904.a.a.b ENSGT00940000180961 ENSGT00950000182952.E ENSGT00940000170150 ENSGT00390000010337.A ENSGT01050000244883.A.a.b ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT00940000162287.C ENSGT00940000164700.A ENSGT01100000263505.b.b.a.a.a.b Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01100000263535.b.a.a.a.a.c.a ENSGT01100000263586 ENSGT00940000163304 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00390000003568 ENSGT00940000164700.B ENSGT00950000182904.a.a.b ENSGT00940000180961 ENSGT00950000182952.E ENSGT00940000170150 ENSGT00390000010337.A ENSGT01050000244883.A.a.b ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT00940000162287.C ENSGT00940000164700.A ENSGT01050000244883.A.a.a.b ENSGT00990000203729 ENSGT01030000234576.D.a.a.b.a.a.a.b Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183007.b.f #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183007.b.f #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183007.b.f #22 Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.a #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.a #22 Pomacentridae ANCESTRAL SPECIES 102 ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Pomacentridae_A ANCESTRAL SPECIES 76 ENSGT00390000005524 ENSGT00950000182980.a.b.a.b.a.b ENSGT00940000158474 ENSGT00390000016736.a.i ENSGT00940000155583 ENSGT00390000002201 ENSGT00550000074807.d.a.b ENSGT00940000163080.b ENSGT00940000162391 ENSGT00950000183139.B.p ENSGT00940000164711.a ENSGT00950000182767.b.a.a ENSGT00390000013814 ENSGT00730000111160 ENSGT00390000017718 ENSGT00950000183007.b.f.a #22 Amphiprion DUPLICATION Amphiprion ANCESTRAL SPECIES 68 ENSGT00390000005524 ENSGT00950000182980.a.b.a.b.a.b ENSGT00940000158474 ENSGT00390000016736.a.i ENSGT00940000155583 ENSGT00390000002201 ENSGT00550000074807.d.a.b ENSGT00940000163080.b ENSGT00940000162391 ENSGT00950000183139.B.p ENSGT00940000164711.a ENSGT00950000182767.b.a.a ENSGT00390000013814 ENSGT00730000111160 ENSGT00390000017718 ENSGT00950000183007.b.f.a.a #22 ENSGT00950000183007.b.f.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000182865.b.a.b.b.a.a.b.b.q.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 9 NRDE2 (ENSAPEG00000001711) ENSAPEG00000001730 ttc7b (ENSAPEG00000001784) fam177a1 (ENSAPEG00000001876) ppp2r3c (ENSAPEG00000001905) PRORP (ENSAPEG00000001983) psma6a (ENSAPEG00000002018) nfkbiab (ENSAPEG00000002043) INSM2 (ENSAPEG00000002055) RALGAPA1 (ENSAPEG00000002126) ENSAPEG00000002408 ENSAPEG00000002438 gemin2 (ENSAPEG00000002529) pnn (ENSAPEG00000002552) FBXO33 (ENSAPEG00000002568) ENSAPEG00000002637 #22 ENSAPEG00000002648 #22 ENSAPEG00000002664 #22 DAAM2 (ENSAPEG00000002687) kif6 (ENSAPEG00000002785) KCNK16 (ENSAPEG00000003151) ENSAPEG00000003195 kcnk5a (ENSAPEG00000003283) rab3gap2 (ENSAPEG00000003338) iars2 (ENSAPEG00000003588) ENSAPEG00000003661 qrsl1 (ENSAPEG00000003719) rtn4ip1 (ENSAPEG00000003768) ENSAPEG00000003820 ENSAPEG00000003944 CCR6 (ENSAPEG00000003960) Orange clownfish MODERN SPECIES 9 ENSAPEG00000001730 ttc7b (ENSAPEG00000001784) fam177a1 (ENSAPEG00000001876) ppp2r3c (ENSAPEG00000001905) PRORP (ENSAPEG00000001983) psma6a (ENSAPEG00000002018) nfkbiab (ENSAPEG00000002043) INSM2 (ENSAPEG00000002055) RALGAPA1 (ENSAPEG00000002126) ENSAPEG00000002408 ENSAPEG00000002438 gemin2 (ENSAPEG00000002529) pnn (ENSAPEG00000002552) FBXO33 (ENSAPEG00000002568) ENSAPEG00000002637 #22 ENSAPEG00000002648 #22 ENSAPEG00000002664 #22 DAAM2 (ENSAPEG00000002687) kif6 (ENSAPEG00000002785) KCNK16 (ENSAPEG00000003151) ENSAPEG00000003195 kcnk5a (ENSAPEG00000003283) rab3gap2 (ENSAPEG00000003338) iars2 (ENSAPEG00000003588) ENSAPEG00000003661 qrsl1 (ENSAPEG00000003719) rtn4ip1 (ENSAPEG00000003768) ENSAPEG00000003820 ENSAPEG00000003944 CCR6 (ENSAPEG00000003960) PXDN (ENSAPEG00000003984) Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1935 ENSAOCG00000016549 #22 ENSAOCG00000016538 #22 DAAM2 (ENSAOCG00000016529) ENSAOCG00000016455 Clown anemonefish MODERN SPECIES 1609 RALGAPA1 (ENSAOCG00000012746) ENSAOCG00000012454 ENSAOCG00000012417 gemin2 (ENSAOCG00000012349) pnn (ENSAOCG00000012308) FBXO33 (ENSAOCG00000012286) ENSAOCG00000012267 #22 ENSAOCG00000012228 ENSAOCG00000012214 ENSAOCG00000012156 rtn4ip1 (ENSAOCG00000002144) qrsl1 (ENSAOCG00000011883) iars2 (ENSAOCG00000011811) ENSAOCG00000011661 rab3gap2 (ENSAOCG00000011624) kcnk5a (ENSAOCG00000011586) Amphiprion ANCESTRAL SPECIES 68 ENSGT00950000182980.a.b.a.b.a.b ENSGT00940000158474 ENSGT00390000016736.a.i ENSGT00940000155583 ENSGT00390000002201 ENSGT00550000074807.d.a.b ENSGT00940000163080.b ENSGT00940000162391 ENSGT00950000183139.B.p ENSGT00940000164711.a ENSGT00950000182767.b.a.a ENSGT00390000013814 ENSGT00730000111160 ENSGT00390000017718 ENSGT00950000183007.b.f.a.a #22 ENSGT00950000183007.b.f.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000182865.b.a.b.b.a.a.b.b.q.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Clown anemonefish MODERN SPECIES 1935 ENSAOCG00000016549 #22 ENSAOCG00000016538 #22 DAAM2 (ENSAOCG00000016529) ENSAOCG00000016455 Orange clownfish MODERN SPECIES 9 ttc7b (ENSAPEG00000001784) fam177a1 (ENSAPEG00000001876) ppp2r3c (ENSAPEG00000001905) PRORP (ENSAPEG00000001983) psma6a (ENSAPEG00000002018) nfkbiab (ENSAPEG00000002043) INSM2 (ENSAPEG00000002055) RALGAPA1 (ENSAPEG00000002126) ENSAPEG00000002408 ENSAPEG00000002438 gemin2 (ENSAPEG00000002529) pnn (ENSAPEG00000002552) FBXO33 (ENSAPEG00000002568) ENSAPEG00000002637 #22 ENSAPEG00000002648 #22 ENSAPEG00000002664 #22 DAAM2 (ENSAPEG00000002687) kif6 (ENSAPEG00000002785) KCNK16 (ENSAPEG00000003151) ENSAPEG00000003195 kcnk5a (ENSAPEG00000003283) rab3gap2 (ENSAPEG00000003338) iars2 (ENSAPEG00000003588) ENSAPEG00000003661 qrsl1 (ENSAPEG00000003719) rtn4ip1 (ENSAPEG00000003768) ENSAPEG00000003820 ENSAPEG00000003944 CCR6 (ENSAPEG00000003960) PXDN (ENSAPEG00000003984) MYT1L (ENSAPEG00000004104) Spiny chromis MODERN SPECIES 456 NRDE2 (ENSAPOG00000009202) ENSAPOG00000009183 ttc7b (ENSAPOG00000009157) fam177a1 (ENSAPOG00000009064) ppp2r3c (ENSAPOG00000009033) PRORP (ENSAPOG00000008975) psma6a (ENSAPOG00000008951) nfkbiab (ENSAPOG00000008909) INSM2 (ENSAPOG00000008900) RALGAPA1 (ENSAPOG00000008848) ENSAPOG00000008551 ENSAPOG00000008462 gemin2 (ENSAPOG00000008388) pnn (ENSAPOG00000008373) FBXO33 (ENSAPOG00000008361) irgf1 (ENSAPOG00000008330) #22 Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 272 nfkbiab (ENSSPAG00000000967) INSM2 (ENSSPAG00000000980) RALGAPA1 (ENSSPAG00000001042) ENSSPAG00000001205 ENSSPAG00000001259 ENSSPAG00000001340 gemin2 (ENSSPAG00000001354) pnn (ENSSPAG00000001376) FBXO33 (ENSSPAG00000001398) ENSSPAG00000001416 #22 ENSSPAG00000001409 #22 ENSSPAG00000001433 #22 ENSSPAG00000001448 ENSSPAG00000001463 ENSSPAG00000001480 #22 ENSSPAG00000001499 #22 DAAM2 (ENSSPAG00000001535) kif6 (ENSSPAG00000001680) KCNK16 (ENSSPAG00000001730) ENSSPAG00000001745 kcnk5a (ENSSPAG00000001775) rab3gap2 (ENSSPAG00000001803) iars2 (ENSSPAG00000001847) qrsl1 (ENSSPAG00000001896) rtn4ip1 (ENSSPAG00000001946) ENSSPAG00000001988 CCR6 (ENSSPAG00000002104) PXDN (ENSSPAG00000002116) MYT1L (ENSSPAG00000002198) Bicolor damselfish MODERN SPECIES 2776 ENSSPAG00000021002 #22 Bicolor damselfish MODERN SPECIES 272 fam177a1 (ENSSPAG00000000821) ppp2r3c (ENSSPAG00000000831) PRORP (ENSSPAG00000000893) ENSSPAG00000000904 psma6a (ENSSPAG00000000936) nfkbiab (ENSSPAG00000000967) INSM2 (ENSSPAG00000000980) RALGAPA1 (ENSSPAG00000001042) ENSSPAG00000001205 ENSSPAG00000001259 ENSSPAG00000001340 gemin2 (ENSSPAG00000001354) pnn (ENSSPAG00000001376) FBXO33 (ENSSPAG00000001398) ENSSPAG00000001416 #22 ENSSPAG00000001409 #22 ENSSPAG00000001433 #22 ENSSPAG00000001448 ENSSPAG00000001463 ENSSPAG00000001480 #22 ENSSPAG00000001499 #22 DAAM2 (ENSSPAG00000001535) kif6 (ENSSPAG00000001680) KCNK16 (ENSSPAG00000001730) ENSSPAG00000001745 kcnk5a (ENSSPAG00000001775) rab3gap2 (ENSSPAG00000001803) iars2 (ENSSPAG00000001847) qrsl1 (ENSSPAG00000001896) rtn4ip1 (ENSSPAG00000001946) ENSSPAG00000001988 Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2755 ENSSPAG00000020385 #22 ENSSPAG00000020347 #22 Bicolor damselfish MODERN SPECIES 2755 ENSSPAG00000020385 #22 ENSSPAG00000020347 #22 Bicolor damselfish DUPLICATION Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 272 psma6a (ENSSPAG00000000936) nfkbiab (ENSSPAG00000000967) INSM2 (ENSSPAG00000000980) RALGAPA1 (ENSSPAG00000001042) ENSSPAG00000001205 ENSSPAG00000001259 ENSSPAG00000001340 gemin2 (ENSSPAG00000001354) pnn (ENSSPAG00000001376) FBXO33 (ENSSPAG00000001398) ENSSPAG00000001416 #22 ENSSPAG00000001409 #22 ENSSPAG00000001433 #22 ENSSPAG00000001448 ENSSPAG00000001463 ENSSPAG00000001480 #22 ENSSPAG00000001499 #22 DAAM2 (ENSSPAG00000001535) kif6 (ENSSPAG00000001680) KCNK16 (ENSSPAG00000001730) ENSSPAG00000001745 kcnk5a (ENSSPAG00000001775) rab3gap2 (ENSSPAG00000001803) iars2 (ENSSPAG00000001847) qrsl1 (ENSSPAG00000001896) rtn4ip1 (ENSSPAG00000001946) ENSSPAG00000001988 CCR6 (ENSSPAG00000002104) PXDN (ENSSPAG00000002116) MYT1L (ENSSPAG00000002198) Bicolor damselfish MODERN SPECIES 2818 ENSSPAG00000006926 #22 Bicolor damselfish MODERN SPECIES 272 ppp2r3c (ENSSPAG00000000831) PRORP (ENSSPAG00000000893) ENSSPAG00000000904 psma6a (ENSSPAG00000000936) nfkbiab (ENSSPAG00000000967) INSM2 (ENSSPAG00000000980) RALGAPA1 (ENSSPAG00000001042) ENSSPAG00000001205 ENSSPAG00000001259 ENSSPAG00000001340 gemin2 (ENSSPAG00000001354) pnn (ENSSPAG00000001376) FBXO33 (ENSSPAG00000001398) ENSSPAG00000001416 #22 ENSSPAG00000001409 #22 ENSSPAG00000001433 #22 ENSSPAG00000001448 ENSSPAG00000001463 ENSSPAG00000001480 #22 ENSSPAG00000001499 #22 DAAM2 (ENSSPAG00000001535) kif6 (ENSSPAG00000001680) KCNK16 (ENSSPAG00000001730) ENSSPAG00000001745 kcnk5a (ENSSPAG00000001775) rab3gap2 (ENSSPAG00000001803) iars2 (ENSSPAG00000001847) qrsl1 (ENSSPAG00000001896) rtn4ip1 (ENSSPAG00000001946) ENSSPAG00000001988 CCR6 (ENSSPAG00000002104) Bicolor damselfish MODERN SPECIES 272 ttc7b (ENSSPAG00000000738) fam177a1 (ENSSPAG00000000821) ppp2r3c (ENSSPAG00000000831) PRORP (ENSSPAG00000000893) ENSSPAG00000000904 psma6a (ENSSPAG00000000936) nfkbiab (ENSSPAG00000000967) INSM2 (ENSSPAG00000000980) RALGAPA1 (ENSSPAG00000001042) ENSSPAG00000001205 ENSSPAG00000001259 ENSSPAG00000001340 gemin2 (ENSSPAG00000001354) pnn (ENSSPAG00000001376) FBXO33 (ENSSPAG00000001398) ENSSPAG00000001416 #22 ENSSPAG00000001409 #22 ENSSPAG00000001433 #22 ENSSPAG00000001448 ENSSPAG00000001463 ENSSPAG00000001480 #22 ENSSPAG00000001499 #22 DAAM2 (ENSSPAG00000001535) kif6 (ENSSPAG00000001680) KCNK16 (ENSSPAG00000001730) ENSSPAG00000001745 kcnk5a (ENSSPAG00000001775) rab3gap2 (ENSSPAG00000001803) iars2 (ENSSPAG00000001847) qrsl1 (ENSSPAG00000001896) rtn4ip1 (ENSSPAG00000001946) Bicolor damselfish MODERN SPECIES 2823 ENSSPAG00000007371 #22 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00390000016567.m.b ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448.g Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448.g Barramundi perch MODERN SPECIES 241 kcns3a (ENSLCAG00010005256) wdr35 (ENSLCAG00010005228) matn3b (ENSLCAG00010005208) ENSLCAG00010005193 odc1 (ENSLCAG00010005179) nol10 (ENSLCAG00010004927) ATP6V1C2 (ENSLCAG00010004842) KCNF1 (ENSLCAG00010004835) mocs1 (ENSLCAG00010004821) irgf1 (ENSLCAG00010004807) #22 DAAM2 (ENSLCAG00010004737) kif6 (ENSLCAG00010004713) KCNK16 (ENSLCAG00010004702) ENSLCAG00010004698 kcnk5a (ENSLCAG00010004695) rab3gap2 (ENSLCAG00010004014) iars2 (ENSLCAG00010003561) qrsl1 (ENSLCAG00010003442) rtn4ip1 (ENSLCAG00010003415) ENSLCAG00010003405 ENSLCAG00010003402 CCR6 (ENSLCAG00010003400) MYT1L (ENSLCAG00010003334) eipr1 (ENSLCAG00010003295) trappc12 (ENSLCAG00010003263) Seriola DUPLICATION Seriola DUPLICATION Seriola ANCESTRAL SPECIES 3 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.e.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448.g Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 292 ENSSLDG00000006807 #22 Yellowtail amberjack MODERN SPECIES 3240 kcns3a (ENSSLDG00000015380) wdr35 (ENSSLDG00000015205) matn3b (ENSSLDG00000015107) ENSSLDG00000015067 odc1 (ENSSLDG00000015046) nol10 (ENSSLDG00000015011) ATP6V1C2 (ENSSLDG00000014894) KCNF1 (ENSSLDG00000014773) mocs1 (ENSSLDG00000014740) ENSSLDG00000014712 #22 ENSSLDG00000014645 #22 DAAM2 (ENSSLDG00000014541) kif6 (ENSSLDG00000014464) KCNK16 (ENSSLDG00000014427) ENSSLDG00000014409 kcnk5a (ENSSLDG00000014389) rab3gap2 (ENSSLDG00000014329) iars2 (ENSSLDG00000014169) qrsl1 (ENSSLDG00000014048) rtn4ip1 (ENSSLDG00000014020) ENSSLDG00000013944 CCR6 (ENSSLDG00000013891) PXDN (ENSSLDG00000013799) MYT1L (ENSSLDG00000013741) eipr1 (ENSSLDG00000013716) trappc12 (ENSSLDG00000013686) Greater amberjack MODERN SPECIES 62 SLC4A1AP (ENSSDUG00000018659) ENSSDUG00000018682 ENSSDUG00000018689 rbks (ENSSDUG00000018696) babam2 (ENSSDUG00000018730) fosl2 (ENSSDUG00000018752) kcns3a (ENSSDUG00000018772) wdr35 (ENSSDUG00000018801) matn3b (ENSSDUG00000018972) ENSSDUG00000019047 odc1 (ENSSDUG00000019177) nol10 (ENSSDUG00000019201) ATP6V1C2 (ENSSDUG00000019280) KCNF1 (ENSSDUG00000019316) mocs1 (ENSSDUG00000019321) ENSSDUG00000019335 #22 ENSSDUG00000019349 #22 ENSSDUG00000019361 #22 DAAM2 (ENSSDUG00000019372) kif6 (ENSSDUG00000019424) KCNK16 (ENSSDUG00000019458) ENSSDUG00000019468 kcnk5a (ENSSDUG00000019479) rab3gap2 (ENSSDUG00000019544) iars2 (ENSSDUG00000020153) qrsl1 (ENSSDUG00000020235) rtn4ip1 (ENSSDUG00000020290) ENSSDUG00000020319 CCR6 (ENSSDUG00000020402) PXDN (ENSSDUG00000020416) MYT1L (ENSSDUG00000020564) Seriola ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.e.b #22 Yellowtail amberjack MODERN SPECIES 3240 kcns3a (ENSSLDG00000015380) wdr35 (ENSSLDG00000015205) matn3b (ENSSLDG00000015107) ENSSLDG00000015067 odc1 (ENSSLDG00000015046) nol10 (ENSSLDG00000015011) ATP6V1C2 (ENSSLDG00000014894) KCNF1 (ENSSLDG00000014773) mocs1 (ENSSLDG00000014740) ENSSLDG00000014712 #22 ENSSLDG00000014645 #22 DAAM2 (ENSSLDG00000014541) kif6 (ENSSLDG00000014464) KCNK16 (ENSSLDG00000014427) ENSSLDG00000014409 kcnk5a (ENSSLDG00000014389) rab3gap2 (ENSSLDG00000014329) iars2 (ENSSLDG00000014169) qrsl1 (ENSSLDG00000014048) rtn4ip1 (ENSSLDG00000014020) ENSSLDG00000013944 CCR6 (ENSSLDG00000013891) PXDN (ENSSLDG00000013799) MYT1L (ENSSLDG00000013741) eipr1 (ENSSLDG00000013716) Seriola ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.f #22 Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 62 eipr1 (ENSSDUG00000020606) MYT1L (ENSSDUG00000020564) PXDN (ENSSDUG00000020416) CCR6 (ENSSDUG00000020402) ENSSDUG00000020319 rtn4ip1 (ENSSDUG00000020290) qrsl1 (ENSSDUG00000020235) iars2 (ENSSDUG00000020153) rab3gap2 (ENSSDUG00000019544) kcnk5a (ENSSDUG00000019479) ENSSDUG00000019468 KCNK16 (ENSSDUG00000019458) kif6 (ENSSDUG00000019424) DAAM2 (ENSSDUG00000019372) ENSSDUG00000019361 #22 ENSSDUG00000019349 #22 ENSSDUG00000019335 #22 mocs1 (ENSSDUG00000019321) KCNF1 (ENSSDUG00000019316) ATP6V1C2 (ENSSDUG00000019280) nol10 (ENSSDUG00000019201) odc1 (ENSSDUG00000019177) ENSSDUG00000019047 matn3b (ENSSDUG00000018972) wdr35 (ENSSDUG00000018801) kcns3a (ENSSDUG00000018772) fosl2 (ENSSDUG00000018752) babam2 (ENSSDUG00000018730) rbks (ENSSDUG00000018696) ENSSDUG00000018689 ENSSDUG00000018682 Greater amberjack MODERN SPECIES 62 ENSSDUG00000018689 rbks (ENSSDUG00000018696) babam2 (ENSSDUG00000018730) fosl2 (ENSSDUG00000018752) kcns3a (ENSSDUG00000018772) wdr35 (ENSSDUG00000018801) matn3b (ENSSDUG00000018972) ENSSDUG00000019047 odc1 (ENSSDUG00000019177) nol10 (ENSSDUG00000019201) ATP6V1C2 (ENSSDUG00000019280) KCNF1 (ENSSDUG00000019316) mocs1 (ENSSDUG00000019321) ENSSDUG00000019335 #22 ENSSDUG00000019349 #22 ENSSDUG00000019361 #22 DAAM2 (ENSSDUG00000019372) kif6 (ENSSDUG00000019424) KCNK16 (ENSSDUG00000019458) ENSSDUG00000019468 kcnk5a (ENSSDUG00000019479) rab3gap2 (ENSSDUG00000019544) iars2 (ENSSDUG00000020153) qrsl1 (ENSSDUG00000020235) rtn4ip1 (ENSSDUG00000020290) ENSSDUG00000020319 CCR6 (ENSSDUG00000020402) PXDN (ENSSDUG00000020416) MYT1L (ENSSDUG00000020564) eipr1 (ENSSDUG00000020606) trappc12 (ENSSDUG00000020623) Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 Climbing perch DUPLICATION Climbing perch DUPLICATION Climbing perch DUPLICATION Climbing perch MODERN SPECIES 3 babam2 (ENSATEG00000011100) fosl2 (ENSATEG00000030155) kcns3a (ENSATEG00000011201) ENSATEG00000011213 matn3b (ENSATEG00000011329) ENSATEG00000011382 odc1 (ENSATEG00000011393) ENSATEG00000026539 NOL10 (ENSATEG00000011452) ATP6V1C2 (ENSATEG00000011531) KCNF1 (ENSATEG00000011547) MOCS1 (ENSATEG00000011559) ENSATEG00000011665 #22 ENSATEG00000011621 #22 ENSATEG00000011733 #22 ENSATEG00000011805 #22 DAAM2 (ENSATEG00000011894) KIF6 (ENSATEG00000011988) KCNK16 (ENSATEG00000012177) kcnk5a (ENSATEG00000012216) rab3gap2 (ENSATEG00000012226) iars2 (ENSATEG00000012272) qrsl1 (ENSATEG00000012394) rtn4ip1 (ENSATEG00000012438) ENSATEG00000012473 ENSATEG00000012528 ENSATEG00000012537 PXDN (ENSATEG00000012552) eipr1 (ENSATEG00000012735) trappc12 (ENSATEG00000012779) adi1 (ENSATEG00000012842) Climbing perch MODERN SPECIES 3 mrpl33 (ENSATEG00000011035) babam2 (ENSATEG00000011100) fosl2 (ENSATEG00000030155) kcns3a (ENSATEG00000011201) ENSATEG00000011213 matn3b (ENSATEG00000011329) ENSATEG00000011382 odc1 (ENSATEG00000011393) ENSATEG00000026539 NOL10 (ENSATEG00000011452) ATP6V1C2 (ENSATEG00000011531) KCNF1 (ENSATEG00000011547) MOCS1 (ENSATEG00000011559) ENSATEG00000011665 #22 ENSATEG00000011621 #22 ENSATEG00000011733 #22 ENSATEG00000011805 #22 DAAM2 (ENSATEG00000011894) KIF6 (ENSATEG00000011988) KCNK16 (ENSATEG00000012177) kcnk5a (ENSATEG00000012216) rab3gap2 (ENSATEG00000012226) iars2 (ENSATEG00000012272) qrsl1 (ENSATEG00000012394) rtn4ip1 (ENSATEG00000012438) ENSATEG00000012473 ENSATEG00000012528 ENSATEG00000012537 PXDN (ENSATEG00000012552) eipr1 (ENSATEG00000012735) trappc12 (ENSATEG00000012779) Climbing perch MODERN SPECIES 3 rbks (ENSATEG00000011022) mrpl33 (ENSATEG00000011035) babam2 (ENSATEG00000011100) fosl2 (ENSATEG00000030155) kcns3a (ENSATEG00000011201) ENSATEG00000011213 matn3b (ENSATEG00000011329) ENSATEG00000011382 odc1 (ENSATEG00000011393) ENSATEG00000026539 NOL10 (ENSATEG00000011452) ATP6V1C2 (ENSATEG00000011531) KCNF1 (ENSATEG00000011547) MOCS1 (ENSATEG00000011559) ENSATEG00000011665 #22 ENSATEG00000011621 #22 ENSATEG00000011733 #22 ENSATEG00000011805 #22 DAAM2 (ENSATEG00000011894) KIF6 (ENSATEG00000011988) KCNK16 (ENSATEG00000012177) kcnk5a (ENSATEG00000012216) rab3gap2 (ENSATEG00000012226) iars2 (ENSATEG00000012272) qrsl1 (ENSATEG00000012394) rtn4ip1 (ENSATEG00000012438) ENSATEG00000012473 ENSATEG00000012528 ENSATEG00000012537 PXDN (ENSATEG00000012552) eipr1 (ENSATEG00000012735) Climbing perch MODERN SPECIES 3 ENSATEG00000011014 rbks (ENSATEG00000011022) mrpl33 (ENSATEG00000011035) babam2 (ENSATEG00000011100) fosl2 (ENSATEG00000030155) kcns3a (ENSATEG00000011201) ENSATEG00000011213 matn3b (ENSATEG00000011329) ENSATEG00000011382 odc1 (ENSATEG00000011393) ENSATEG00000026539 NOL10 (ENSATEG00000011452) ATP6V1C2 (ENSATEG00000011531) KCNF1 (ENSATEG00000011547) MOCS1 (ENSATEG00000011559) ENSATEG00000011665 #22 ENSATEG00000011621 #22 ENSATEG00000011733 #22 ENSATEG00000011805 #22 DAAM2 (ENSATEG00000011894) KIF6 (ENSATEG00000011988) KCNK16 (ENSATEG00000012177) kcnk5a (ENSATEG00000012216) rab3gap2 (ENSATEG00000012226) iars2 (ENSATEG00000012272) qrsl1 (ENSATEG00000012394) rtn4ip1 (ENSATEG00000012438) ENSATEG00000012473 ENSATEG00000012528 ENSATEG00000012537 PXDN (ENSATEG00000012552) Siamese fighting fish MODERN SPECIES 1 ENSBSLG00000012438 ENSBSLG00000011775 hdx (ENSBSLG00000011563) rps6kal (ENSBSLG00000011086) POU3F4 (ENSBSLG00000011060) ENSBSLG00000011043 ENSBSLG00000010712 ENSBSLG00000010586 ENSBSLG00000010102 ENSBSLG00000010080 TBX22 (ENSBSLG00000010060) ITM2A (ENSBSLG00000010048) ENSBSLG00000010038 p2ry10 (ENSBSLG00000010026) LPAR4 (ENSBSLG00000010006) irgf1 (ENSBSLG00000009986) #22 cysltr1 (ENSBSLG00000009972) ENSBSLG00000009954 polr1d (ENSBSLG00000009941) sybl1 (ENSBSLG00000009903) ENSBSLG00000009876 ENSBSLG00000009859 pdgfrl (ENSBSLG00000009841) slc7a2 (ENSBSLG00000009666) mtmr7a (ENSBSLG00000008812) cnot7 (ENSBSLG00000008789) zdhhc2 (ENSBSLG00000008484) MICU3 (ENSBSLG00000008397) fgf20b (ENSBSLG00000008352) ENSBSLG00000008334 her5 (ENSBSLG00000008321) Zig-zag eel MODERN SPECIES 14 ENSMAMG00000014341 rbks (ENSMAMG00000014356) mrpl33 (ENSMAMG00000014373) babam2 (ENSMAMG00000014427) fosl2 (ENSMAMG00000028314) kcns3a (ENSMAMG00000014515) ENSMAMG00000014543 matn3b (ENSMAMG00000014675) ENSMAMG00000014798 ENSMAMG00000014873 odc1 (ENSMAMG00000014893) NOL10 (ENSMAMG00000014932) ATP6V1C2 (ENSMAMG00000015024) KCNF1 (ENSMAMG00000015072) MOCS1 (ENSMAMG00000015085) ENSMAMG00000015105 #22 ENSMAMG00000027266 DAAM2 (ENSMAMG00000015118) kif6 (ENSMAMG00000015201) KCNK16 (ENSMAMG00000015246) ENSMAMG00000015262 kcnk5a (ENSMAMG00000015271) rab3gap2 (ENSMAMG00000015288) iars2 (ENSMAMG00000015306) qrsl1 (ENSMAMG00000015389) rtn4ip1 (ENSMAMG00000015435) ENSMAMG00000015464 ENSMAMG00000015484 PXDN (ENSMAMG00000015492) ENSMAMG00000028050 eipr1 (ENSMAMG00000015622) Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a #22 ENSGT00390000016567.m.b ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Eupecaria_A DUPLICATION Eupecaria_A DUPLICATION Eupecaria_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.a #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.a #22 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.a #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.a #22 Large yellow croaker DUPLICATION Large yellow croaker DUPLICATION Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 82 ENSLCRG00005003170 #22 ENSLCRG00005003171 #22 ENSLCRG00005003172 #22 Large yellow croaker MODERN SPECIES 495 trappc12 (ENSLCRG00005020107) eipr1 (ENSLCRG00005020101) MYT1L (ENSLCRG00005019792) PXDN (ENSLCRG00005019757) CCR6 (ENSLCRG00005019753) ENSLCRG00005019749 rtn4ip1 (ENSLCRG00005019739) qrsl1 (ENSLCRG00005019736) iars2 (ENSLCRG00005018968) rab3gap2 (ENSLCRG00005016038) kcnk5a (ENSLCRG00005016006) ENSLCRG00005016004 KCNK16 (ENSLCRG00005016002) kif6 (ENSLCRG00005015993) DAAM2 (ENSLCRG00005015821) ENSLCRG00005015820 #22 ENSLCRG00005015819 #22 mocs1 (ENSLCRG00005015789) KCNF1 (ENSLCRG00005015786) ATP6V1C2 (ENSLCRG00005015785) nol10 (ENSLCRG00005015763) odc1 (ENSLCRG00005015742) ENSLCRG00005015741 matn3b (ENSLCRG00005015739) wdr35 (ENSLCRG00005014376) kcns3a (ENSLCRG00005014368) ENSLCRG00005014366 fosl2 (ENSLCRG00005014365) babam2 (ENSLCRG00005014273) rbks (ENSLCRG00005014268) mrpl33 (ENSLCRG00005014266) Large yellow croaker MODERN SPECIES 82 ENSLCRG00005003172 #22 ENSLCRG00005003171 #22 ENSLCRG00005003170 #22 Large yellow croaker MODERN SPECIES 82 ENSLCRG00005003172 #22 ENSLCRG00005003171 #22 ENSLCRG00005003170 #22 European seabass DUPLICATION European seabass MODERN SPECIES 2 PXDN (ENSDLAG00005011487) ENSDLAG00005011566 ENSDLAG00005011585 rtn4ip1 (ENSDLAG00005034059) qrsl1 (ENSDLAG00005012073) iars2 (ENSDLAG00005012118) rab3gap2 (ENSDLAG00005013513) kcnk5a (ENSDLAG00005031102) ENSDLAG00005029230 kif6 (ENSDLAG00005017710) DAAM2 (ENSDLAG00005017813) ENSDLAG00005034633 #22 ENSDLAG00005026456 #22 ENSDLAG00005019943 ENSDLAG00005034994 #22 ENSDLAG00005031841 #22 MOCS1 (ENSDLAG00005019955) nol10 (ENSDLAG00005020083) ENSDLAG00005020058 ATP6V1C2 (ENSDLAG00005020068) ENSDLAG00005020133 ENSDLAG00005032918 ENSDLAG00005032438 matn3b (ENSDLAG00005020158) ENSDLAG00005020184 kcns3a (ENSDLAG00005020380) fosl2 (ENSDLAG00005028627) babam2 (ENSDLAG00005020396) rbks (ENSDLAG00005020417) mrpl33 (ENSDLAG00005020432) ENSDLAG00005033439 European seabass MODERN SPECIES 2 mrpl33 (ENSDLAG00005020432) rbks (ENSDLAG00005020417) babam2 (ENSDLAG00005020396) fosl2 (ENSDLAG00005028627) kcns3a (ENSDLAG00005020380) ENSDLAG00005020184 matn3b (ENSDLAG00005020158) ENSDLAG00005032438 ENSDLAG00005032918 ENSDLAG00005020133 ATP6V1C2 (ENSDLAG00005020068) ENSDLAG00005020058 nol10 (ENSDLAG00005020083) MOCS1 (ENSDLAG00005019955) ENSDLAG00005031841 #22 ENSDLAG00005034994 #22 ENSDLAG00005019943 ENSDLAG00005026456 #22 ENSDLAG00005034633 #22 DAAM2 (ENSDLAG00005017813) kif6 (ENSDLAG00005017710) ENSDLAG00005029230 kcnk5a (ENSDLAG00005031102) rab3gap2 (ENSDLAG00005013513) iars2 (ENSDLAG00005012118) qrsl1 (ENSDLAG00005012073) rtn4ip1 (ENSDLAG00005034059) ENSDLAG00005011585 ENSDLAG00005011566 PXDN (ENSDLAG00005011487) MYT1L (ENSDLAG00005010915) Eupecaria_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.b #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.b #22 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.i.b #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00950000183007.b.f.a.i.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 European seabass DUPLICATION European seabass MODERN SPECIES 2 babam2 (ENSDLAG00005020396) fosl2 (ENSDLAG00005028627) kcns3a (ENSDLAG00005020380) ENSDLAG00005020184 matn3b (ENSDLAG00005020158) ENSDLAG00005032438 ENSDLAG00005032918 ENSDLAG00005020133 ATP6V1C2 (ENSDLAG00005020068) ENSDLAG00005020058 nol10 (ENSDLAG00005020083) MOCS1 (ENSDLAG00005019955) ENSDLAG00005031841 #22 ENSDLAG00005034994 #22 ENSDLAG00005019943 ENSDLAG00005026456 #22 ENSDLAG00005034633 #22 DAAM2 (ENSDLAG00005017813) kif6 (ENSDLAG00005017710) ENSDLAG00005029230 kcnk5a (ENSDLAG00005031102) rab3gap2 (ENSDLAG00005013513) iars2 (ENSDLAG00005012118) qrsl1 (ENSDLAG00005012073) rtn4ip1 (ENSDLAG00005034059) ENSDLAG00005011585 ENSDLAG00005011566 PXDN (ENSDLAG00005011487) MYT1L (ENSDLAG00005010915) eipr1 (ENSDLAG00005010854) trappc12 (ENSDLAG00005009667) European seabass MODERN SPECIES 2 fosl2 (ENSDLAG00005028627) kcns3a (ENSDLAG00005020380) ENSDLAG00005020184 matn3b (ENSDLAG00005020158) ENSDLAG00005032438 ENSDLAG00005032918 ENSDLAG00005020133 ATP6V1C2 (ENSDLAG00005020068) ENSDLAG00005020058 nol10 (ENSDLAG00005020083) MOCS1 (ENSDLAG00005019955) ENSDLAG00005031841 #22 ENSDLAG00005034994 #22 ENSDLAG00005019943 ENSDLAG00005026456 #22 ENSDLAG00005034633 #22 DAAM2 (ENSDLAG00005017813) kif6 (ENSDLAG00005017710) ENSDLAG00005029230 kcnk5a (ENSDLAG00005031102) rab3gap2 (ENSDLAG00005013513) iars2 (ENSDLAG00005012118) qrsl1 (ENSDLAG00005012073) rtn4ip1 (ENSDLAG00005034059) ENSDLAG00005011585 ENSDLAG00005011566 PXDN (ENSDLAG00005011487) MYT1L (ENSDLAG00005010915) eipr1 (ENSDLAG00005010854) trappc12 (ENSDLAG00005009667) adi1 (ENSDLAG00005009613) Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004584 #22 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 ENSSAUG00010004622 #22 ENSSAUG00010004624 ENSSAUG00010004625 ENSSAUG00010004627 slc5a6a (ENSSAUG00010004631) ccnt1 (ENSSAUG00010004662) kansl2 (ENSSAUG00010004670) ENSSAUG00010004677 TMBIM6 (ENSSAUG00010004681) ctdsp2 (ENSSAUG00010004687) ENSSAUG00010004769 MARCHF9 (ENSSAUG00010008965) tspan31 (ENSSAUG00010008966) agap2 (ENSSAUG00010008972) ENSSAUG00010009082 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004605 #22 ENSSAUG00010004602 #22 ENSSAUG00010004598 ENSSAUG00010004596 #22 ENSSAUG00010004594 ENSSAUG00010004592 #22 ENSSAUG00010004589 ENSSAUG00010004585 ENSSAUG00010004584 #22 ENSSAUG00010004580 ENSSAUG00010004575 ENSSAUG00010004566 ENSSAUG00010004560 ENSSAUG00010004553 ENSSAUG00010004551 ENSSAUG00010004549 #22 CABLES2 (ENSSAUG00010004547) CCM2L (ENSSAUG00010004541) xkr7b (ENSSAUG00010004538) SOX18 (ENSSAUG00010004534) tcea2 (ENSSAUG00010004532) rgs19 (ENSSAUG00010004530) FAM187A (ENSSAUG00010004513) oprl1 (ENSSAUG00010004507) NPBWR2 (ENSSAUG00010004504) ENSSAUG00010004497 RAB29 (ENSSAUG00010004492) cry3a (ENSSAUG00010004169) rps21 (ENSSAUG00010004075) lama5 (ENSSAUG00010027326) adrm1 (ENSSAUG00010027295) Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 21 xkr7b (ENSSAUG00010004538) CCM2L (ENSSAUG00010004541) CABLES2 (ENSSAUG00010004547) ENSSAUG00010004549 #22 ENSSAUG00010004551 ENSSAUG00010004553 ENSSAUG00010004560 ENSSAUG00010004566 ENSSAUG00010004575 ENSSAUG00010004580 ENSSAUG00010004584 #22 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 ENSSAUG00010004622 #22 ENSSAUG00010004624 ENSSAUG00010004625 ENSSAUG00010004627 slc5a6a (ENSSAUG00010004631) Gilthead seabream MODERN SPECIES 21 oprl1 (ENSSAUG00010004507) FAM187A (ENSSAUG00010004513) rgs19 (ENSSAUG00010004530) tcea2 (ENSSAUG00010004532) SOX18 (ENSSAUG00010004534) xkr7b (ENSSAUG00010004538) CCM2L (ENSSAUG00010004541) CABLES2 (ENSSAUG00010004547) ENSSAUG00010004549 #22 ENSSAUG00010004551 ENSSAUG00010004553 ENSSAUG00010004560 ENSSAUG00010004566 ENSSAUG00010004575 ENSSAUG00010004580 ENSSAUG00010004584 #22 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004580 ENSSAUG00010004584 #22 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 ENSSAUG00010004622 #22 ENSSAUG00010004624 ENSSAUG00010004625 ENSSAUG00010004627 slc5a6a (ENSSAUG00010004631) ccnt1 (ENSSAUG00010004662) kansl2 (ENSSAUG00010004670) ENSSAUG00010004677 TMBIM6 (ENSSAUG00010004681) ctdsp2 (ENSSAUG00010004687) ENSSAUG00010004769 MARCHF9 (ENSSAUG00010008965) tspan31 (ENSSAUG00010008966) agap2 (ENSSAUG00010008972) Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004677 kansl2 (ENSSAUG00010004670) ccnt1 (ENSSAUG00010004662) slc5a6a (ENSSAUG00010004631) ENSSAUG00010004627 ENSSAUG00010004625 ENSSAUG00010004624 ENSSAUG00010004622 #22 ENSSAUG00010004620 #22 ENSSAUG00010004617 #22 ENSSAUG00010004616 ENSSAUG00010004614 ENSSAUG00010004612 ENSSAUG00010004609 ENSSAUG00010004607 ENSSAUG00010004605 #22 ENSSAUG00010004602 #22 ENSSAUG00010004598 ENSSAUG00010004596 #22 ENSSAUG00010004594 ENSSAUG00010004592 #22 ENSSAUG00010004589 ENSSAUG00010004585 ENSSAUG00010004584 #22 ENSSAUG00010004580 ENSSAUG00010004575 ENSSAUG00010004566 ENSSAUG00010004560 ENSSAUG00010004553 ENSSAUG00010004551 ENSSAUG00010004549 #22 Gilthead seabream MODERN SPECIES 21 tcea2 (ENSSAUG00010004532) SOX18 (ENSSAUG00010004534) xkr7b (ENSSAUG00010004538) CCM2L (ENSSAUG00010004541) CABLES2 (ENSSAUG00010004547) ENSSAUG00010004549 #22 ENSSAUG00010004551 ENSSAUG00010004553 ENSSAUG00010004560 ENSSAUG00010004566 ENSSAUG00010004575 ENSSAUG00010004580 ENSSAUG00010004584 #22 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 ENSSAUG00010004622 #22 ENSSAUG00010004624 ENSSAUG00010004625 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010004585 ENSSAUG00010004589 ENSSAUG00010004592 #22 ENSSAUG00010004594 ENSSAUG00010004596 #22 ENSSAUG00010004598 ENSSAUG00010004602 #22 ENSSAUG00010004605 #22 ENSSAUG00010004607 ENSSAUG00010004609 ENSSAUG00010004612 ENSSAUG00010004614 ENSSAUG00010004616 ENSSAUG00010004617 #22 ENSSAUG00010004620 #22 ENSSAUG00010004622 #22 ENSSAUG00010004624 ENSSAUG00010004625 ENSSAUG00010004627 slc5a6a (ENSSAUG00010004631) ccnt1 (ENSSAUG00010004662) kansl2 (ENSSAUG00010004670) ENSSAUG00010004677 TMBIM6 (ENSSAUG00010004681) ctdsp2 (ENSSAUG00010004687) ENSSAUG00010004769 MARCHF9 (ENSSAUG00010008965) tspan31 (ENSSAUG00010008966) agap2 (ENSSAUG00010008972) ENSSAUG00010009082 gpr182 (ENSSAUG00010009086) Gilthead seabream MODERN SPECIES 21 kansl2 (ENSSAUG00010004670) ccnt1 (ENSSAUG00010004662) slc5a6a (ENSSAUG00010004631) ENSSAUG00010004627 ENSSAUG00010004625 ENSSAUG00010004624 ENSSAUG00010004622 #22 ENSSAUG00010004620 #22 ENSSAUG00010004617 #22 ENSSAUG00010004616 ENSSAUG00010004614 ENSSAUG00010004612 ENSSAUG00010004609 ENSSAUG00010004607 ENSSAUG00010004605 #22 ENSSAUG00010004602 #22 ENSSAUG00010004598 ENSSAUG00010004596 #22 ENSSAUG00010004594 ENSSAUG00010004592 #22 ENSSAUG00010004589 ENSSAUG00010004585 ENSSAUG00010004584 #22 ENSSAUG00010004580 ENSSAUG00010004575 ENSSAUG00010004566 ENSSAUG00010004560 ENSSAUG00010004553 ENSSAUG00010004551 ENSSAUG00010004549 #22 CABLES2 (ENSSAUG00010004547) Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1513 ENSLBEG00000014554 #22 ENSLBEG00000014508 #22 ENSLBEG00000014433 #22 Ballan wrasse MODERN SPECIES 166 babam2 (ENSLBEG00000023131) fosl2 (ENSLBEG00000023194) kcns3a (ENSLBEG00000023213) wdr35 (ENSLBEG00000023287) matn3b (ENSLBEG00000023408) ENSLBEG00000023427 ENSLBEG00000023450 ENSLBEG00000023473 odc1 (ENSLBEG00000023499) ENSLBEG00000023538 nol10 (ENSLBEG00000023587) ATP6V1C2 (ENSLBEG00000023731) ENSLBEG00000024008 KCNF1 (ENSLBEG00000024030) mocs1 (ENSLBEG00000024056) ENSLBEG00000024086 #22 ENSLBEG00000024117 #22 Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 1567 ENSLBEG00000020851 #22 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 982 ENSLBEG00000022674 ENSLBEG00000022717 #22 Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 3155 ENSLBEG00000012594 #22 ENSLBEG00000012635 #22 Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 924 mocs1 (ENSLBEG00000005572) ENSLBEG00000005535 #22 ENSLBEG00000005443 #22 ENSLBEG00000005396 ENSLBEG00000005332 #22 ENSLBEG00000005298 #22 ENSLBEG00000005277 #22 ENSLBEG00000005253 ENSLBEG00000005157 #22 Ballan wrasse MODERN SPECIES 1513 ENSLBEG00000014554 #22 ENSLBEG00000014508 #22 ENSLBEG00000014433 #22 Ballan wrasse MODERN SPECIES 1692 ENSLBEG00000014201 #22 ENSLBEG00000014225 #22 Ballan wrasse MODERN SPECIES 1692 ENSLBEG00000014201 #22 ENSLBEG00000014225 #22 Ballan wrasse MODERN SPECIES 2172 ENSLBEG00000010876 #22 Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1513 ENSLBEG00000014554 #22 ENSLBEG00000014508 #22 ENSLBEG00000014433 #22 Ballan wrasse MODERN SPECIES 166 fosl2 (ENSLBEG00000023194) kcns3a (ENSLBEG00000023213) wdr35 (ENSLBEG00000023287) matn3b (ENSLBEG00000023408) ENSLBEG00000023427 ENSLBEG00000023450 ENSLBEG00000023473 odc1 (ENSLBEG00000023499) ENSLBEG00000023538 nol10 (ENSLBEG00000023587) ATP6V1C2 (ENSLBEG00000023731) ENSLBEG00000024008 KCNF1 (ENSLBEG00000024030) mocs1 (ENSLBEG00000024056) ENSLBEG00000024086 #22 ENSLBEG00000024117 #22 Ballan wrasse MODERN SPECIES 3155 ENSLBEG00000012594 #22 ENSLBEG00000012635 #22 Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00390000016567.m.b ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00390000016567.m.b ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183007.b.f.a.j #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00950000183007.b.f.a.i.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Large yellow croaker MODERN SPECIES 495 ENSLCRG00005023588 mrpl33 (ENSLCRG00005014266) rbks (ENSLCRG00005014268) babam2 (ENSLCRG00005014273) fosl2 (ENSLCRG00005014365) ENSLCRG00005014366 kcns3a (ENSLCRG00005014368) wdr35 (ENSLCRG00005014376) matn3b (ENSLCRG00005015739) ENSLCRG00005015741 odc1 (ENSLCRG00005015742) nol10 (ENSLCRG00005015763) ATP6V1C2 (ENSLCRG00005015785) KCNF1 (ENSLCRG00005015786) mocs1 (ENSLCRG00005015789) ENSLCRG00005015819 #22 ENSLCRG00005015820 #22 DAAM2 (ENSLCRG00005015821) kif6 (ENSLCRG00005015993) KCNK16 (ENSLCRG00005016002) ENSLCRG00005016004 kcnk5a (ENSLCRG00005016006) rab3gap2 (ENSLCRG00005016038) iars2 (ENSLCRG00005018968) qrsl1 (ENSLCRG00005019736) rtn4ip1 (ENSLCRG00005019739) ENSLCRG00005019749 CCR6 (ENSLCRG00005019753) PXDN (ENSLCRG00005019757) MYT1L (ENSLCRG00005019792) eipr1 (ENSLCRG00005020101) Perciformes ANCESTRAL SPECIES 12 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00390000016567.m.b ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.a.j #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 Channel bull blenny MODERN SPECIES 14 SLC4A1AP (ENSCGOG00000005238) ENSCGOG00000005237 ENSCGOG00000005232 rbks (ENSCGOG00000005223) babam2 (ENSCGOG00000004911) fosl2 (ENSCGOG00000004894) kcns3a (ENSCGOG00000004883) wdr35 (ENSCGOG00000003818) ENSCGOG00000003804 matn3b (ENSCGOG00000003801) odc1 (ENSCGOG00000003667) nol10 (ENSCGOG00000003009) ATP6V1C2 (ENSCGOG00000002958) KCNF1 (ENSCGOG00000002955) mocs1 (ENSCGOG00000002737) irgf1 (ENSCGOG00000021573) #22 DAAM2 (ENSCGOG00000021181) kif6 (ENSCGOG00000021159) KCNK16 (ENSCGOG00000021157) kcnk5a (ENSCGOG00000021156) rab3gap2 (ENSCGOG00000019597) iars2 (ENSCGOG00000019485) qrsl1 (ENSCGOG00000019314) rtn4ip1 (ENSCGOG00000019105) ENSCGOG00000018922 CCR6 (ENSCGOG00000018914) PXDN (ENSCGOG00000018753) MYT1L (ENSCGOG00000018473) eipr1 (ENSCGOG00000018327) trappc12 (ENSCGOG00000018044) adi1 (ENSCGOG00000018324) Pike perch DUPLICATION Pike perch DUPLICATION Pike perch DUPLICATION Pike perch DUPLICATION Pike perch MODERN SPECIES 269 ENSSLUG00000016931 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016594 #22 ENSSLUG00000016586 #22 ENSSLUG00000016579 #22 ENSSLUG00000016575 #22 ENSSLUG00000016568 #22 ENSSLUG00000016547 ENSSLUG00000016540 #22 lipf (ENSSLUG00000016531) rnls (ENSSLUG00000016517) ptena (ENSSLUG00000016512) atad1b (ENSSLUG00000016470) minpp1b (ENSSLUG00000007556) MFAP4 (ENSSLUG00000007536) MFAP4 (ENSSLUG00000007532) ENSSLUG00000007527 slc16a12b (ENSSLUG00000007522) ENSSLUG00000007515 bbs1 (ENSSLUG00000007508) lect2.1 (ENSSLUG00000007497) Pike perch MODERN SPECIES 269 ENSSLUG00000007515 slc16a12b (ENSSLUG00000007522) ENSSLUG00000007527 MFAP4 (ENSSLUG00000007532) MFAP4 (ENSSLUG00000007536) minpp1b (ENSSLUG00000007556) atad1b (ENSSLUG00000016470) ptena (ENSSLUG00000016512) rnls (ENSSLUG00000016517) lipf (ENSSLUG00000016531) ENSSLUG00000016540 #22 ENSSLUG00000016547 ENSSLUG00000016568 #22 ENSSLUG00000016575 #22 ENSSLUG00000016579 #22 ENSSLUG00000016586 #22 ENSSLUG00000016594 #22 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016931 Pike perch DUPLICATION Pike perch DUPLICATION Pike perch MODERN SPECIES 269 bbs1 (ENSSLUG00000007508) ENSSLUG00000007515 slc16a12b (ENSSLUG00000007522) ENSSLUG00000007527 MFAP4 (ENSSLUG00000007532) MFAP4 (ENSSLUG00000007536) minpp1b (ENSSLUG00000007556) atad1b (ENSSLUG00000016470) ptena (ENSSLUG00000016512) rnls (ENSSLUG00000016517) lipf (ENSSLUG00000016531) ENSSLUG00000016540 #22 ENSSLUG00000016547 ENSSLUG00000016568 #22 ENSSLUG00000016575 #22 ENSSLUG00000016579 #22 ENSSLUG00000016586 #22 ENSSLUG00000016594 #22 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016931 Pike perch MODERN SPECIES 269 ENSSLUG00000016931 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016594 #22 ENSSLUG00000016586 #22 ENSSLUG00000016579 #22 ENSSLUG00000016575 #22 ENSSLUG00000016568 #22 ENSSLUG00000016547 ENSSLUG00000016540 #22 lipf (ENSSLUG00000016531) rnls (ENSSLUG00000016517) ptena (ENSSLUG00000016512) atad1b (ENSSLUG00000016470) minpp1b (ENSSLUG00000007556) MFAP4 (ENSSLUG00000007536) MFAP4 (ENSSLUG00000007532) ENSSLUG00000007527 slc16a12b (ENSSLUG00000007522) Pike perch DUPLICATION Pike perch MODERN SPECIES 269 MFAP4 (ENSSLUG00000007490) lect2.1 (ENSSLUG00000007497) bbs1 (ENSSLUG00000007508) ENSSLUG00000007515 slc16a12b (ENSSLUG00000007522) ENSSLUG00000007527 MFAP4 (ENSSLUG00000007532) MFAP4 (ENSSLUG00000007536) minpp1b (ENSSLUG00000007556) atad1b (ENSSLUG00000016470) ptena (ENSSLUG00000016512) rnls (ENSSLUG00000016517) lipf (ENSSLUG00000016531) ENSSLUG00000016540 #22 ENSSLUG00000016547 ENSSLUG00000016568 #22 ENSSLUG00000016575 #22 ENSSLUG00000016579 #22 ENSSLUG00000016586 #22 ENSSLUG00000016594 #22 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016931 Pike perch MODERN SPECIES 269 ENSSLUG00000016931 STAMBPL1 (ENSSLUG00000016613) ENSSLUG00000016594 #22 ENSSLUG00000016586 #22 ENSSLUG00000016579 #22 ENSSLUG00000016575 #22 ENSSLUG00000016568 #22 ENSSLUG00000016547 ENSSLUG00000016540 #22 lipf (ENSSLUG00000016531) rnls (ENSSLUG00000016517) ptena (ENSSLUG00000016512) atad1b (ENSSLUG00000016470) minpp1b (ENSSLUG00000007556) MFAP4 (ENSSLUG00000007536) MFAP4 (ENSSLUG00000007532) ENSSLUG00000007527 slc16a12b (ENSSLUG00000007522) ENSSLUG00000007515 bbs1 (ENSSLUG00000007508) lect2.1 (ENSSLUG00000007497) MFAP4 (ENSSLUG00000007490) MFAP4 (ENSSLUG00000007484) MFAP4 (ENSSLUG00000007459) Pike perch MODERN SPECIES 247 ENSSLUG00000014007 ENSSLUG00000014004 ENSSLUG00000013999 ENSSLUG00000013985 ENSSLUG00000013982 ENSSLUG00000013972 ENSSLUG00000013962 ENSSLUG00000013952 ENSSLUG00000013891 ENSSLUG00000013862 ENSSLUG00000013851 ENSSLUG00000010485 ENSSLUG00000010235 selenbp1 (ENSSLUG00000010200) myo1eb (ENSSLUG00000009756) ENSSLUG00000009685 #22 ENSSLUG00000009674 ENSSLUG00000009670 ENSSLUG00000009662 ENSSLUG00000009658 ENSSLUG00000009598 ENSSLUG00000009585 ENSSLUG00000009583 ENSSLUG00000009581 ENSSLUG00000009579 ENSSLUG00000009576 Pike perch DUPLICATION Pike perch MODERN SPECIES 39 ENSSLUG00000012217 mrpl33 (ENSSLUG00000012223) rbks (ENSSLUG00000012228) babam2 (ENSSLUG00000012238) fosl2 (ENSSLUG00000012265) kcns3a (ENSSLUG00000012272) wdr35 (ENSSLUG00000012283) ENSSLUG00000012315 ENSSLUG00000012349 odc1 (ENSSLUG00000012358) nol10 (ENSSLUG00000012407) ATP6V1C2 (ENSSLUG00000012440) KCNF1 (ENSSLUG00000012449) mocs1 (ENSSLUG00000012468) ENSSLUG00000012502 #22 ENSSLUG00000012505 #22 ENSSLUG00000012507 #22 DAAM2 (ENSSLUG00000012547) kif6 (ENSSLUG00000012617) KCNK16 (ENSSLUG00000012637) kcnk5a (ENSSLUG00000012645) rab3gap2 (ENSSLUG00000012863) iars2 (ENSSLUG00000018049) qrsl1 (ENSSLUG00000018177) rtn4ip1 (ENSSLUG00000018618) ENSSLUG00000018653 CCR6 (ENSSLUG00000018734) PXDN (ENSSLUG00000018753) ENSSLUG00000018862 eipr1 (ENSSLUG00000018867) trappc12 (ENSSLUG00000018915) Pike perch MODERN SPECIES 39 ENSSLUG00000012202 ENSSLUG00000012217 mrpl33 (ENSSLUG00000012223) rbks (ENSSLUG00000012228) babam2 (ENSSLUG00000012238) fosl2 (ENSSLUG00000012265) kcns3a (ENSSLUG00000012272) wdr35 (ENSSLUG00000012283) ENSSLUG00000012315 ENSSLUG00000012349 odc1 (ENSSLUG00000012358) nol10 (ENSSLUG00000012407) ATP6V1C2 (ENSSLUG00000012440) KCNF1 (ENSSLUG00000012449) mocs1 (ENSSLUG00000012468) ENSSLUG00000012502 #22 ENSSLUG00000012505 #22 ENSSLUG00000012507 #22 DAAM2 (ENSSLUG00000012547) kif6 (ENSSLUG00000012617) KCNK16 (ENSSLUG00000012637) kcnk5a (ENSSLUG00000012645) rab3gap2 (ENSSLUG00000012863) iars2 (ENSSLUG00000018049) qrsl1 (ENSSLUG00000018177) rtn4ip1 (ENSSLUG00000018618) ENSSLUG00000018653 CCR6 (ENSSLUG00000018734) PXDN (ENSSLUG00000018753) ENSSLUG00000018862 eipr1 (ENSSLUG00000018867) Percomorphaceae_B DUPLICATION Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a #22 Cichlidae DUPLICATION Cichlidae DUPLICATION Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a #22 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a #22 Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.a #22 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Lyretail cichlid MODERN SPECIES 226 ENSNBRG00000001731 #22 Haplochromini DUPLICATION Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.a.c #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.a.c #22 P. nyererei MODERN SPECIES 1402 ENSPNYG00000001105 #22 Burton s mouthbrooder MODERN SPECIES 1488 ENSHBUG00000008052 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.a.d #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.a.d #22 P. nyererei MODERN SPECIES 1285 ENSPNYG00000023912 #22 ENSPNYG00000023911 #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.b #22 Burton s mouthbrooder MODERN SPECIES 698 zgc:103759 (ENSHBUG00000005466) ARHGAP4 (ENSHBUG00000005454) cav4b (ENSHBUG00000005383) fam50a (ENSHBUG00000005362) ENSHBUG00000005288 sars1 (ENSHBUG00000005264) ENSHBUG00000005236 tmem106c (ENSHBUG00000005225) ENSHBUG00000005195 krt18a.2 (ENSHBUG00000005122) krt18a.1 (ENSHBUG00000005112) krt8 (ENSHBUG00000005097) krt5 (ENSHBUG00000005060) zgc:171775 (ENSHBUG00000005027) ENSHBUG00000004969 #22 ENSHBUG00000004954 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.b #22 P. nyererei MODERN SPECIES 1074 ENSPNYG00000021492 #22 ENSPNYG00000021508 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.a.b #22 Zebra mbuna MODERN SPECIES 118 CCR6 (ENSMZEG00005027716) ENSMZEG00005027717 #22 ENSMZEG00005027722 ENSMZEG00005027724 #22 ENSMZEG00005027726 ENSMZEG00005027728 #22 ENSMZEG00005027729 #22 ENSMZEG00005027730 #22 ENSMZEG00005027732 #22 ENSMZEG00005027735 ENSMZEG00005027736 #22 ENSMZEG00005027737 #22 ENSMZEG00005027742 #22 ENSMZEG00005027744 #22 ENSMZEG00005027747 #22 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000006980 ENSNBRG00000007052 ldah (ENSNBRG00000007075) ENSNBRG00000007099 ENSNBRG00000007104 ENSNBRG00000007137 ENSNBRG00000007152 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.a.b #22 Lyretail cichlid MODERN SPECIES 363 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) KBTBD11 (ENSNBRG00000008412) ARHGEF10 (ENSNBRG00000008461) cln8 (ENSNBRG00000008575) DLGAP2 (ENSNBRG00000008591) ENSNBRG00000008631 ENSNBRG00000008647 COL12A1 (ENSNBRG00000008688) Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.a #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.a #22 P. nyererei MODERN SPECIES 1285 ENSPNYG00000023912 #22 ENSPNYG00000023911 #22 Lyretail cichlid MODERN SPECIES 363 trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) KBTBD11 (ENSNBRG00000008412) ARHGEF10 (ENSNBRG00000008461) cln8 (ENSNBRG00000008575) DLGAP2 (ENSNBRG00000008591) ENSNBRG00000008631 ENSNBRG00000008647 COL12A1 (ENSNBRG00000008688) tmem30aa (ENSNBRG00000008833) Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.b.a #22 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000008647 ENSNBRG00000008631 DLGAP2 (ENSNBRG00000008591) cln8 (ENSNBRG00000008575) ARHGEF10 (ENSNBRG00000008461) KBTBD11 (ENSNBRG00000008412) ARID1B (ENSNBRG00000008345) ZDHHC14 (ENSNBRG00000008307) LGALS8 (ENSNBRG00000008284) qrsl1 (ENSNBRG00000008249) rtn4ip1 (ENSNBRG00000008231) ENSNBRG00000008149 ENSNBRG00000008099 #22 ENSNBRG00000008076 #22 ENSNBRG00000008065 #22 ENSNBRG00000008018 #22 ENSNBRG00000007953 #22 ENSNBRG00000007934 #22 ENSNBRG00000007886 #22 ENSNBRG00000007806 #22 ENSNBRG00000007782 #22 ENSNBRG00000007712 #22 ENSNBRG00000007654 #22 CCR6 (ENSNBRG00000007638) ENSNBRG00000007624 ENSNBRG00000007528 MYT1L (ENSNBRG00000007457) eipr1 (ENSNBRG00000007369) trappc12 (ENSNBRG00000007211) adi1 (ENSNBRG00000007170) ENSNBRG00000007152 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.b.a #22 Burton s mouthbrooder MODERN SPECIES 698 gss (ENSHBUG00000005546) zgc:103759 (ENSHBUG00000005466) ARHGAP4 (ENSHBUG00000005454) cav4b (ENSHBUG00000005383) fam50a (ENSHBUG00000005362) ENSHBUG00000005288 sars1 (ENSHBUG00000005264) ENSHBUG00000005236 tmem106c (ENSHBUG00000005225) ENSHBUG00000005195 krt18a.2 (ENSHBUG00000005122) krt18a.1 (ENSHBUG00000005112) krt8 (ENSHBUG00000005097) krt5 (ENSHBUG00000005060) zgc:171775 (ENSHBUG00000005027) ENSHBUG00000004969 #22 ENSHBUG00000004954 #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.b.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.a.b.b.b #22 Burton s mouthbrooder MODERN SPECIES 1614 ENSHBUG00000016080 #22 ENSHBUG00000016092 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000154923.C.w.a ENSGT00940000155926.f ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000155926.f ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b Burton s mouthbrooder MODERN SPECIES 600 ENSHBUG00000006242 #22 CCR6 (ENSHBUG00000006244) PXDN (ENSHBUG00000006318) MYT1L (ENSHBUG00000006413) eipr1 (ENSHBUG00000006455) trappc12 (ENSHBUG00000006509) adi1 (ENSHBUG00000006474) ENSHBUG00000006523 ENSHBUG00000006546 ENSHBUG00000006566 ENSHBUG00000006710 ENSHBUG00000006741 ENSHBUG00000006760 #22 GDF7 (ENSHBUG00000006784) ldah (ENSHBUG00000006819) APOB (ENSHBUG00000006855) Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00940000154923.C.w.a ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b P. nyererei MODERN SPECIES 618 ENSPNYG00000004835 #22 CCR6 (ENSPNYG00000004755) PXDN (ENSPNYG00000004445) MYT1L (ENSPNYG00000004226) eipr1 (ENSPNYG00000004064) trappc12 (ENSPNYG00000003940) adi1 (ENSPNYG00000003839) ENSPNYG00000003766 ENSPNYG00000003710 ENSPNYG00000003560 ENSPNYG00000003328 ENSPNYG00000003259 alkbh1 (ENSPNYG00000003199) Haplochromini_B ANCESTRAL SPECIES 80 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00940000165313.f ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b.s ENSGT00390000009688 Zebra mbuna MODERN SPECIES 1101 rpia (ENSMZEG00005003282) EIF2AK3 (ENSMZEG00005003312) ATRN (ENSMZEG00005003375) gfra4a (ENSMZEG00005003463) ENSMZEG00005003472 ENSMZEG00005003508 ENSMZEG00005003532 ENSMZEG00005003558 ENSMZEG00005003567 #22 ENSMZEG00005003591 #22 ENSMZEG00005003660 #22 ENSMZEG00005003829 ENSMZEG00005003854 ENSMZEG00005003870 #22 ENSMZEG00005003910 ENSMZEG00005003945 #22 CCR6 (ENSMZEG00005003972) PXDN (ENSMZEG00005004087) MYT1L (ENSMZEG00005004218) eipr1 (ENSMZEG00005004333) trappc12 (ENSMZEG00005004380) adi1 (ENSMZEG00005004422) DNAL1 (ENSMZEG00005004431) pth2 (ENSMZEG00005004462) ENSMZEG00005004474 ENSMZEG00005004520 ENSMZEG00005004601 slirp (ENSMZEG00005004617) alkbh1 (ENSMZEG00005004627) GDF7 (ENSMZEG00005004695) ldah (ENSMZEG00005004738) Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 34 ENSONIG00000032723 ENSONIG00000040099 #22 CCR6 (ENSONIG00000035513) Nile tilapia MODERN SPECIES 339 ENSONIG00000035934 #22 CCR6 (ENSONIG00000038644) Nile tilapia MODERN SPECIES 333 ENSONIG00000011280 #22 ENSONIG00000032502 #22 Nile tilapia DUPLICATION Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 333 ENSONIG00000011280 #22 ENSONIG00000032502 #22 Nile tilapia MODERN SPECIES 332 ENSONIG00000033468 #22 Nile tilapia MODERN SPECIES 335 ENSONIG00000036554 #22 CCR6 (ENSONIG00000042916) Nile tilapia MODERN SPECIES 10 ENSONIG00000035048 DLGAP2 (ENSONIG00000034680) ENSONIG00000035309 ENSONIG00000041859 cln8 (ENSONIG00000008077) ARHGEF10 (ENSONIG00000008073) KBTBD11 (ENSONIG00000008072) ARID1B (ENSONIG00000008068) ZDHHC14 (ENSONIG00000008067) LGALS8 (ENSONIG00000029743) ENSONIG00000037008 qrsl1 (ENSONIG00000011726) rtn4ip1 (ENSONIG00000011729) ENSONIG00000011731 ENSONIG00000029029 ENSONIG00000037122 #22 ENSONIG00000034023 CCR6 (ENSONIG00000039168) ENSONIG00000043133 ENSONIG00000035708 #22 ENSONIG00000028221 ENSONIG00000040965 #22 ENSONIG00000011733 #22 ENSONIG00000038067 #22 rcor1 (ENSONIG00000011789) traf3 (ENSONIG00000011785) ENSONIG00000030494 ENSONIG00000032688 ENSONIG00000037687 ENSONIG00000034290 ENSONIG00000020536 Nile tilapia MODERN SPECIES 10 dkc1 (ENSONIG00000013889) ENSONIG00000035424 cinp (ENSONIG00000013887) ENSONIG00000013886 tecpr2 (ENSONIG00000013878) ankrd9 (ENSONIG00000013877) ENSONIG00000039708 ENSONIG00000029842 ENSONIG00000032711 ENSONIG00000032713 ENSONIG00000040662 #22 ENSONIG00000028341 ENSONIG00000033908 #22 CCR6 (ENSONIG00000039364) PXDN (ENSONIG00000011663) MYT1L (ENSONIG00000011665) ENSONIG00000034567 eipr1 (ENSONIG00000011672) trappc12 (ENSONIG00000011676) adi1 (ENSONIG00000011677) DNAL1 (ENSONIG00000011679) pth2 (ENSONIG00000011680) ENSONIG00000011681 ENSONIG00000011682 ENSONIG00000034374 slirp (ENSONIG00000035467) alkbh1 (ENSONIG00000038544) GDF7 (ENSONIG00000011696) Nile tilapia MODERN SPECIES 10 dkc1 (ENSONIG00000013889) ENSONIG00000035424 cinp (ENSONIG00000013887) ENSONIG00000013886 tecpr2 (ENSONIG00000013878) ankrd9 (ENSONIG00000013877) ENSONIG00000039708 ENSONIG00000029842 ENSONIG00000032711 ENSONIG00000032713 ENSONIG00000040662 #22 ENSONIG00000028341 ENSONIG00000033908 #22 CCR6 (ENSONIG00000039364) PXDN (ENSONIG00000011663) MYT1L (ENSONIG00000011665) ENSONIG00000034567 eipr1 (ENSONIG00000011672) trappc12 (ENSONIG00000011676) adi1 (ENSONIG00000011677) DNAL1 (ENSONIG00000011679) pth2 (ENSONIG00000011680) ENSONIG00000011681 ENSONIG00000011682 ENSONIG00000034374 slirp (ENSONIG00000035467) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.b #22 Nile tilapia MODERN SPECIES 10 ENSONIG00000041427 tyro3 (ENSONIG00000011751) sec23a (ENSONIG00000011758) srp54 (ENSONIG00000011768) ENSONIG00000011776 lrrc57 (ENSONIG00000038185) ENSONIG00000020536 ENSONIG00000034290 ENSONIG00000037687 ENSONIG00000032688 ENSONIG00000030494 traf3 (ENSONIG00000011785) rcor1 (ENSONIG00000011789) ENSONIG00000038067 #22 ENSONIG00000011733 #22 ENSONIG00000040965 #22 ENSONIG00000028221 ENSONIG00000035708 #22 ENSONIG00000043133 CCR6 (ENSONIG00000039168) ENSONIG00000034023 ENSONIG00000037122 #22 ENSONIG00000029029 ENSONIG00000011731 rtn4ip1 (ENSONIG00000011729) qrsl1 (ENSONIG00000011726) ENSONIG00000037008 LGALS8 (ENSONIG00000029743) ZDHHC14 (ENSONIG00000008067) ARID1B (ENSONIG00000008068) KBTBD11 (ENSONIG00000008072) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.b #22 Haplochromini_B ANCESTRAL SPECIES 475 ENSGT00940000178075.C ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.b #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Eastern happy MODERN SPECIES 10 ARID1B (ENSACLG00000018149) ZDHHC14 (ENSACLG00000018063) LGALS8 (ENSACLG00000018037) qrsl1 (ENSACLG00000018009) alkbh1 (ENSACLG00000017932) rtn4ip1 (ENSACLG00000017885) ENSACLG00000017817 ENSACLG00000017807 #22 ENSACLG00000017805 ENSACLG00000017785 #22 ENSACLG00000017734 #22 ENSACLG00000017700 #22 ENSACLG00000017670 ENSACLG00000017650 #22 ENSACLG00000017608 ENSACLG00000017575 #22 ENSACLG00000017557 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) GPR68 (ENSACLG00000016959) GPR68 (ENSACLG00000016923) ENSACLG00000016915 ccdc88c (ENSACLG00000016821) PALS1 (ENSACLG00000016771) ENSACLG00000016756 Nile tilapia MODERN SPECIES 36 ENSONIG00000031196 #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.a.b.b #22 Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a #22 Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a.a #22 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 363 DGLUCY (ENSNBRG00000006911) ENSNBRG00000006980 ENSNBRG00000007052 ldah (ENSNBRG00000007075) ENSNBRG00000007099 ENSNBRG00000007104 ENSNBRG00000007137 ENSNBRG00000007152 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000007137 ENSNBRG00000007152 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) KBTBD11 (ENSNBRG00000008412) ARHGEF10 (ENSNBRG00000008461) cln8 (ENSNBRG00000008575) DLGAP2 (ENSNBRG00000008591) ENSNBRG00000008631 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a.a #22 P. nyererei DUPLICATION P. nyererei MODERN SPECIES 1305 ENSPNYG00000023966 #22 P. nyererei MODERN SPECIES 619 srp54 (ENSPNYG00000009717) ENSPNYG00000009645 sec23a (ENSPNYG00000009430) tyro3 (ENSPNYG00000009180) mgaa (ENSPNYG00000008961) ENSPNYG00000008861 atg14 (ENSPNYG00000008634) tbpl2 (ENSPNYG00000008385) jmjd7 (ENSPNYG00000008163) fbxo34 (ENSPNYG00000008075) lgals3b (ENSPNYG00000007984) dact1 (ENSPNYG00000007793) irf2bpl (ENSPNYG00000007722) ENSPNYG00000007669 PALS1 (ENSPNYG00000007488) ENSPNYG00000007188 #22 ENSPNYG00000006915 ENSPNYG00000006832 ENSPNYG00000006751 GPR68 (ENSPNYG00000006601) DGLUCY (ENSPNYG00000006479) APOB (ENSPNYG00000005650) ldah (ENSPNYG00000005253) GDF7 (ENSPNYG00000005063) Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a.a #22 Zebra mbuna MODERN SPECIES 118 CCR6 (ENSMZEG00005027716) ENSMZEG00005027717 #22 ENSMZEG00005027722 ENSMZEG00005027724 #22 ENSMZEG00005027726 ENSMZEG00005027728 #22 ENSMZEG00005027729 #22 ENSMZEG00005027730 #22 ENSMZEG00005027732 #22 ENSMZEG00005027735 ENSMZEG00005027736 #22 ENSMZEG00005027737 #22 ENSMZEG00005027742 #22 ENSMZEG00005027744 #22 ENSMZEG00005027747 #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.a.b #22 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000007052 ldah (ENSNBRG00000007075) ENSNBRG00000007099 ENSNBRG00000007104 ENSNBRG00000007137 ENSNBRG00000007152 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) KBTBD11 (ENSNBRG00000008412) Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a #22 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.a #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.a #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.a #22 Haplochromini_A ANCESTRAL SPECIES 132 ENSGT00940000159306.b.b ENSGT00940000153761.A ENSGT00940000155114 ENSGT00940000160057 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.a #22 Haplochromini_B ANCESTRAL SPECIES 138 ENSGT00940000163911.a.a.b.a.a.b.b.c.a.a ENSGT01030000234764.a.b ENSGT00940000159306.b.b ENSGT00940000153761.A ENSGT00940000155114 ENSGT00940000160057 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.a #22 Eastern happy MODERN SPECIES 15 ENSACLG00000008314 ENSACLG00000008308 ENSACLG00000008297 ENSACLG00000008293 ENSACLG00000008291 ENSACLG00000008285 ENSACLG00000008283 ENSACLG00000008282 ENSACLG00000008274 ENSACLG00000008266 ENSACLG00000008253 KCNAB3 (ENSACLG00000008233) trappc1 (ENSACLG00000008221) psmb6 (ENSACLG00000008141) ephb4b (ENSACLG00000008110) ENSACLG00000008069 #22 ENSACLG00000008057 ENSACLG00000008050 ENSACLG00000008048 ENSACLG00000008044 ENSACLG00000008040 ENSACLG00000008038 ENSACLG00000008034 ENSACLG00000008031 ENSACLG00000008027 ENSACLG00000008023 ENSACLG00000008017 ENSACLG00000008013 ENSACLG00000008007 ENSACLG00000007967 hacd4 (ENSACLG00000007952) Zebra mbuna MODERN SPECIES 113 ENSMZEG00005027671 ENSMZEG00005027672 KCNAB3 (ENSMZEG00005027674) trappc1 (ENSMZEG00005027677) psmb6 (ENSMZEG00005027682) ephb4b (ENSMZEG00005027688) ENSMZEG00005027691 #22 ENSMZEG00005027693 ENSMZEG00005027696 P. nyererei MODERN SPECIES 838 KCNAB3 (ENSPNYG00000015397) trappc1 (ENSPNYG00000015447) psmb6 (ENSPNYG00000015466) ephb4b (ENSPNYG00000015502) ENSPNYG00000015569 #22 Lyretail cichlid MODERN SPECIES 363 ARHGEF10 (ENSNBRG00000008461) KBTBD11 (ENSNBRG00000008412) ARID1B (ENSNBRG00000008345) ZDHHC14 (ENSNBRG00000008307) LGALS8 (ENSNBRG00000008284) qrsl1 (ENSNBRG00000008249) rtn4ip1 (ENSNBRG00000008231) ENSNBRG00000008149 ENSNBRG00000008099 #22 ENSNBRG00000008076 #22 ENSNBRG00000008065 #22 ENSNBRG00000008018 #22 ENSNBRG00000007953 #22 ENSNBRG00000007934 #22 ENSNBRG00000007886 #22 ENSNBRG00000007806 #22 ENSNBRG00000007782 #22 ENSNBRG00000007712 #22 ENSNBRG00000007654 #22 CCR6 (ENSNBRG00000007638) ENSNBRG00000007624 ENSNBRG00000007528 MYT1L (ENSNBRG00000007457) eipr1 (ENSNBRG00000007369) trappc12 (ENSNBRG00000007211) adi1 (ENSNBRG00000007170) ENSNBRG00000007152 ENSNBRG00000007137 ENSNBRG00000007104 ENSNBRG00000007099 ldah (ENSNBRG00000007075) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.b #22 Nile tilapia MODERN SPECIES 12 ENSONIG00000014582 ENSONIG00000041396 ENSONIG00000040491 ENSONIG00000039102 ENSONIG00000027643 ENSONIG00000004095 ENSONIG00000034231 ENSONIG00000030908 ENSONIG00000042149 ENSONIG00000033574 ENSONIG00000039893 ENSONIG00000013605 ENSONIG00000040435 ENSONIG00000037523 ENSONIG00000037535 ENSONIG00000027981 #22 ENSONIG00000038856 ENSONIG00000034665 ENSONIG00000031831 ptpn18 (ENSONIG00000014635) gripap1 (ENSONIG00000014636) kcnd1 (ENSONIG00000014643) st14b (ENSONIG00000030483) st14b (ENSONIG00000014645) st14b (ENSONIG00000014650) ENSONIG00000014661 GPR37L1 (ENSONIG00000027203) arl8a (ENSONIG00000014667) itpr3 (ENSONIG00000014673) ENSONIG00000041759 ENSONIG00000014700 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.b #22 Lyretail cichlid MODERN SPECIES 363 cln8 (ENSNBRG00000008575) ARHGEF10 (ENSNBRG00000008461) KBTBD11 (ENSNBRG00000008412) ARID1B (ENSNBRG00000008345) ZDHHC14 (ENSNBRG00000008307) LGALS8 (ENSNBRG00000008284) qrsl1 (ENSNBRG00000008249) rtn4ip1 (ENSNBRG00000008231) ENSNBRG00000008149 ENSNBRG00000008099 #22 ENSNBRG00000008076 #22 ENSNBRG00000008065 #22 ENSNBRG00000008018 #22 ENSNBRG00000007953 #22 ENSNBRG00000007934 #22 ENSNBRG00000007886 #22 ENSNBRG00000007806 #22 ENSNBRG00000007782 #22 ENSNBRG00000007712 #22 ENSNBRG00000007654 #22 CCR6 (ENSNBRG00000007638) ENSNBRG00000007624 ENSNBRG00000007528 MYT1L (ENSNBRG00000007457) eipr1 (ENSNBRG00000007369) trappc12 (ENSNBRG00000007211) adi1 (ENSNBRG00000007170) ENSNBRG00000007152 ENSNBRG00000007137 ENSNBRG00000007104 ENSNBRG00000007099 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.b #22 Burton s mouthbrooder MODERN SPECIES 70 ENSHBUG00000021695 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.a.b #22 P. nyererei MODERN SPECIES 233 ENSPNYG00000005217 #22 Midas cichlid MODERN SPECIES 457 osr1 (ENSACIG00000000302) ENSACIG00000000280 #22 galcb (ENSACIG00000000225) Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b #22 Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000155926.f ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g Burton s mouthbrooder MODERN SPECIES 53 ENSHBUG00000023667 #22 ENSHBUG00000023623 #22 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00390000004660.C.a.a.c ENSGT00940000154923.C.w.a ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g Haplochromini_B ANCESTRAL SPECIES 37 ENSGT00390000004660.C.a.a.c ENSGT00940000154923.C.w.a ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 Zebra mbuna MODERN SPECIES 651 ENSMZEG00005013284 #22 ENSMZEG00005013307 #22 ENSMZEG00005013539 #22 P. nyererei MODERN SPECIES 1074 ENSPNYG00000021508 #22 ENSPNYG00000021492 #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.b #22 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000007104 ENSNBRG00000007137 ENSNBRG00000007152 adi1 (ENSNBRG00000007170) trappc12 (ENSNBRG00000007211) eipr1 (ENSNBRG00000007369) MYT1L (ENSNBRG00000007457) ENSNBRG00000007528 ENSNBRG00000007624 CCR6 (ENSNBRG00000007638) ENSNBRG00000007654 #22 ENSNBRG00000007712 #22 ENSNBRG00000007782 #22 ENSNBRG00000007806 #22 ENSNBRG00000007886 #22 ENSNBRG00000007934 #22 ENSNBRG00000007953 #22 ENSNBRG00000008018 #22 ENSNBRG00000008065 #22 ENSNBRG00000008076 #22 ENSNBRG00000008099 #22 ENSNBRG00000008149 rtn4ip1 (ENSNBRG00000008231) qrsl1 (ENSNBRG00000008249) LGALS8 (ENSNBRG00000008284) ZDHHC14 (ENSNBRG00000008307) ARID1B (ENSNBRG00000008345) KBTBD11 (ENSNBRG00000008412) ARHGEF10 (ENSNBRG00000008461) cln8 (ENSNBRG00000008575) DLGAP2 (ENSNBRG00000008591) Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.b #22 Burton s mouthbrooder MODERN SPECIES 1492 ENSHBUG00000007885 #22 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 1198 ENSACIG00000000621 #22 Midas cichlid MODERN SPECIES 1184 ENSACIG00000014719 ENSACIG00000014652 #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.a.b #22 Nile tilapia MODERN SPECIES 10 ENSONIG00000011745 ENSONIG00000041427 tyro3 (ENSONIG00000011751) sec23a (ENSONIG00000011758) srp54 (ENSONIG00000011768) ENSONIG00000011776 lrrc57 (ENSONIG00000038185) ENSONIG00000020536 ENSONIG00000034290 ENSONIG00000037687 ENSONIG00000032688 ENSONIG00000030494 traf3 (ENSONIG00000011785) rcor1 (ENSONIG00000011789) ENSONIG00000038067 #22 ENSONIG00000011733 #22 ENSONIG00000040965 #22 ENSONIG00000028221 ENSONIG00000035708 #22 ENSONIG00000043133 CCR6 (ENSONIG00000039168) ENSONIG00000034023 ENSONIG00000037122 #22 ENSONIG00000029029 ENSONIG00000011731 rtn4ip1 (ENSONIG00000011729) qrsl1 (ENSONIG00000011726) ENSONIG00000037008 LGALS8 (ENSONIG00000029743) ZDHHC14 (ENSONIG00000008067) ARID1B (ENSONIG00000008068) Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000154923.C.w.a ENSGT00940000155926.f ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 152 ENSNBRG00000000314 #22 Lyretail cichlid MODERN SPECIES 363 FILIP1 (ENSNBRG00000008896) tmem30aa (ENSNBRG00000008833) COL12A1 (ENSNBRG00000008688) ENSNBRG00000008647 ENSNBRG00000008631 DLGAP2 (ENSNBRG00000008591) cln8 (ENSNBRG00000008575) ARHGEF10 (ENSNBRG00000008461) KBTBD11 (ENSNBRG00000008412) ARID1B (ENSNBRG00000008345) ZDHHC14 (ENSNBRG00000008307) LGALS8 (ENSNBRG00000008284) qrsl1 (ENSNBRG00000008249) rtn4ip1 (ENSNBRG00000008231) ENSNBRG00000008149 ENSNBRG00000008099 #22 ENSNBRG00000008076 #22 ENSNBRG00000008065 #22 ENSNBRG00000008018 #22 ENSNBRG00000007953 #22 ENSNBRG00000007934 #22 ENSNBRG00000007886 #22 ENSNBRG00000007806 #22 ENSNBRG00000007782 #22 ENSNBRG00000007712 #22 ENSNBRG00000007654 #22 CCR6 (ENSNBRG00000007638) ENSNBRG00000007624 ENSNBRG00000007528 MYT1L (ENSNBRG00000007457) eipr1 (ENSNBRG00000007369) Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000154923.C.w.a ENSGT00940000155926.f ENSGT00940000153592.A.b ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 Burton s mouthbrooder MODERN SPECIES 53 ENSHBUG00000023667 #22 ENSHBUG00000023623 #22 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00950000182852.A.a.a.b ENSGT00390000004660.C.a.a.c ENSGT00940000154923.C.w.a ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a #22 ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 P. nyererei MODERN SPECIES 1193 ENSPNYG00000023680 #22 Haplochromini_B ANCESTRAL SPECIES 37 ENSGT00950000182852.A.a.a.b ENSGT00390000004660.C.a.a.c ENSGT00940000154923.C.w.a ENSGT00650000094954 ENSGT00390000005606 ENSGT00940000157913.b.a ENSGT01010000222313.A.a ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a #22 Eastern happy MODERN SPECIES 10 ENSACLG00000018470 ENSACLG00000018461 ENSACLG00000018455 ENSACLG00000018440 DLGAP2 (ENSACLG00000018398) cln8 (ENSACLG00000018379) ARHGEF10 (ENSACLG00000018226) KBTBD11 (ENSACLG00000018222) ARID1B (ENSACLG00000018149) ZDHHC14 (ENSACLG00000018063) LGALS8 (ENSACLG00000018037) qrsl1 (ENSACLG00000018009) alkbh1 (ENSACLG00000017932) rtn4ip1 (ENSACLG00000017885) ENSACLG00000017817 ENSACLG00000017807 #22 ENSACLG00000017805 ENSACLG00000017785 #22 ENSACLG00000017734 #22 ENSACLG00000017700 #22 ENSACLG00000017670 ENSACLG00000017650 #22 ENSACLG00000017608 ENSACLG00000017575 #22 ENSACLG00000017557 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) Zebra mbuna MODERN SPECIES 651 ENSMZEG00005013284 #22 ENSMZEG00005013307 #22 ENSMZEG00005013539 #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.a.b #22 P. nyererei MODERN SPECIES 1210 ENSPNYG00000023728 #22 Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a #22 Cichlidae DUPLICATION Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a #22 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a #22 Pseudocrenilabrinae_A DUPLICATION Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.a #22 Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.a #22 P. nyererei MODERN SPECIES 1448 ENSPNYG00000002964 #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b #22 Haplochromini DUPLICATION Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a #22 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 153 ENSGT00950000183007.b.f.b.a.b.b.a.a #22 ENSGT01030000234934.c ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.a #22 Zebra mbuna MODERN SPECIES 1101 pth2 (ENSMZEG00005004462) DNAL1 (ENSMZEG00005004431) adi1 (ENSMZEG00005004422) trappc12 (ENSMZEG00005004380) eipr1 (ENSMZEG00005004333) MYT1L (ENSMZEG00005004218) PXDN (ENSMZEG00005004087) CCR6 (ENSMZEG00005003972) ENSMZEG00005003945 #22 ENSMZEG00005003910 ENSMZEG00005003870 #22 ENSMZEG00005003854 ENSMZEG00005003829 ENSMZEG00005003660 #22 ENSMZEG00005003591 #22 ENSMZEG00005003567 #22 ENSMZEG00005003558 ENSMZEG00005003532 ENSMZEG00005003508 ENSMZEG00005003472 gfra4a (ENSMZEG00005003463) ATRN (ENSMZEG00005003375) EIF2AK3 (ENSMZEG00005003312) rpia (ENSMZEG00005003282) ENSMZEG00005003263 slc4a11 (ENSMZEG00005003156) ENSMZEG00005003114 dnaaf9 (ENSMZEG00005002915) ENSMZEG00005002897 ENSMZEG00005002891 foxi2 (ENSMZEG00005002881) Eastern happy MODERN SPECIES 10 GPR68 (ENSACLG00000016959) DGLUCY (ENSACLG00000017007) APOB (ENSACLG00000017073) ldah (ENSACLG00000017167) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017320) ENSACLG00000017414 MYT1L (ENSACLG00000017447) PXDN (ENSACLG00000017492) ENSACLG00000017557 ENSACLG00000017575 #22 ENSACLG00000017608 ENSACLG00000017650 #22 ENSACLG00000017670 ENSACLG00000017700 #22 ENSACLG00000017734 #22 ENSACLG00000017785 #22 ENSACLG00000017805 ENSACLG00000017807 #22 ENSACLG00000017817 rtn4ip1 (ENSACLG00000017885) alkbh1 (ENSACLG00000017932) qrsl1 (ENSACLG00000018009) LGALS8 (ENSACLG00000018037) ZDHHC14 (ENSACLG00000018063) ARID1B (ENSACLG00000018149) KBTBD11 (ENSACLG00000018222) ARHGEF10 (ENSACLG00000018226) cln8 (ENSACLG00000018379) DLGAP2 (ENSACLG00000018398) ENSACLG00000018440 Haplochromini_B DUPLICATION Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.b.a.a #22 Eastern happy MODERN SPECIES 10 ENSACLG00000018455 ENSACLG00000018440 DLGAP2 (ENSACLG00000018398) cln8 (ENSACLG00000018379) ARHGEF10 (ENSACLG00000018226) KBTBD11 (ENSACLG00000018222) ARID1B (ENSACLG00000018149) ZDHHC14 (ENSACLG00000018063) LGALS8 (ENSACLG00000018037) qrsl1 (ENSACLG00000018009) alkbh1 (ENSACLG00000017932) rtn4ip1 (ENSACLG00000017885) ENSACLG00000017817 ENSACLG00000017807 #22 ENSACLG00000017805 ENSACLG00000017785 #22 ENSACLG00000017734 #22 ENSACLG00000017700 #22 ENSACLG00000017670 ENSACLG00000017650 #22 ENSACLG00000017608 ENSACLG00000017575 #22 ENSACLG00000017557 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005002897 dnaaf9 (ENSMZEG00005002915) ENSMZEG00005003114 slc4a11 (ENSMZEG00005003156) ENSMZEG00005003263 rpia (ENSMZEG00005003282) EIF2AK3 (ENSMZEG00005003312) ATRN (ENSMZEG00005003375) gfra4a (ENSMZEG00005003463) ENSMZEG00005003472 ENSMZEG00005003508 ENSMZEG00005003532 ENSMZEG00005003558 ENSMZEG00005003567 #22 ENSMZEG00005003591 #22 ENSMZEG00005003660 #22 ENSMZEG00005003829 ENSMZEG00005003854 ENSMZEG00005003870 #22 ENSMZEG00005003910 ENSMZEG00005003945 #22 CCR6 (ENSMZEG00005003972) PXDN (ENSMZEG00005004087) MYT1L (ENSMZEG00005004218) eipr1 (ENSMZEG00005004333) trappc12 (ENSMZEG00005004380) adi1 (ENSMZEG00005004422) DNAL1 (ENSMZEG00005004431) pth2 (ENSMZEG00005004462) ENSMZEG00005004474 ENSMZEG00005004520 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.b.a.b #22 Zebra mbuna MODERN SPECIES 118 CCR6 (ENSMZEG00005027716) ENSMZEG00005027717 #22 ENSMZEG00005027722 ENSMZEG00005027724 #22 ENSMZEG00005027726 ENSMZEG00005027728 #22 ENSMZEG00005027729 #22 ENSMZEG00005027730 #22 ENSMZEG00005027732 #22 ENSMZEG00005027735 ENSMZEG00005027736 #22 ENSMZEG00005027737 #22 ENSMZEG00005027742 #22 ENSMZEG00005027744 #22 ENSMZEG00005027747 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.b.b #22 Zebra mbuna MODERN SPECIES 118 CCR6 (ENSMZEG00005027716) ENSMZEG00005027717 #22 ENSMZEG00005027722 ENSMZEG00005027724 #22 ENSMZEG00005027726 ENSMZEG00005027728 #22 ENSMZEG00005027729 #22 ENSMZEG00005027730 #22 ENSMZEG00005027732 #22 ENSMZEG00005027735 ENSMZEG00005027736 #22 ENSMZEG00005027737 #22 ENSMZEG00005027742 #22 ENSMZEG00005027744 #22 ENSMZEG00005027747 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.b #22 Burton s mouthbrooder MODERN SPECIES 132 ENSHBUG00000018791 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.b #22 P. nyererei MODERN SPECIES 1249 ENSPNYG00000023816 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.b #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000021962 #22 ENSNBRG00000021988 #22 ENSNBRG00000022012 #22 ENSNBRG00000022035 #22 ENSNBRG00000022060 #22 ENSNBRG00000022072 #22 ENSNBRG00000022088 ENSNBRG00000022092 #22 ENSNBRG00000022096 #22 ENSNBRG00000022107 ENSNBRG00000022115 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 Haplochromini_B ANCESTRAL SPECIES 153 ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.a #22 ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 ENSGT01030000234934.c ENSGT00950000183007.b.f.b.a.b.b.a.a #22 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005002891 ENSMZEG00005002897 dnaaf9 (ENSMZEG00005002915) ENSMZEG00005003114 slc4a11 (ENSMZEG00005003156) ENSMZEG00005003263 rpia (ENSMZEG00005003282) EIF2AK3 (ENSMZEG00005003312) ATRN (ENSMZEG00005003375) gfra4a (ENSMZEG00005003463) ENSMZEG00005003472 ENSMZEG00005003508 ENSMZEG00005003532 ENSMZEG00005003558 ENSMZEG00005003567 #22 ENSMZEG00005003591 #22 ENSMZEG00005003660 #22 ENSMZEG00005003829 ENSMZEG00005003854 ENSMZEG00005003870 #22 ENSMZEG00005003910 ENSMZEG00005003945 #22 CCR6 (ENSMZEG00005003972) PXDN (ENSMZEG00005004087) MYT1L (ENSMZEG00005004218) eipr1 (ENSMZEG00005004333) trappc12 (ENSMZEG00005004380) adi1 (ENSMZEG00005004422) DNAL1 (ENSMZEG00005004431) pth2 (ENSMZEG00005004462) ENSMZEG00005004474 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Eastern happy MODERN SPECIES 10 DLGAP2 (ENSACLG00000018398) cln8 (ENSACLG00000018379) ARHGEF10 (ENSACLG00000018226) KBTBD11 (ENSACLG00000018222) ARID1B (ENSACLG00000018149) ZDHHC14 (ENSACLG00000018063) LGALS8 (ENSACLG00000018037) qrsl1 (ENSACLG00000018009) alkbh1 (ENSACLG00000017932) rtn4ip1 (ENSACLG00000017885) ENSACLG00000017817 ENSACLG00000017807 #22 ENSACLG00000017805 ENSACLG00000017785 #22 ENSACLG00000017734 #22 ENSACLG00000017700 #22 ENSACLG00000017670 ENSACLG00000017650 #22 ENSACLG00000017608 ENSACLG00000017575 #22 ENSACLG00000017557 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) GPR68 (ENSACLG00000016959) GPR68 (ENSACLG00000016923) Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000021962 #22 ENSNBRG00000021988 #22 ENSNBRG00000022012 #22 ENSNBRG00000022035 #22 ENSNBRG00000022060 #22 ENSNBRG00000022072 #22 ENSNBRG00000022088 ENSNBRG00000022092 #22 ENSNBRG00000022096 #22 ENSNBRG00000022107 ENSNBRG00000022115 Nile tilapia MODERN SPECIES 10 cln8 (ENSONIG00000008077) ARHGEF10 (ENSONIG00000008073) KBTBD11 (ENSONIG00000008072) ARID1B (ENSONIG00000008068) ZDHHC14 (ENSONIG00000008067) LGALS8 (ENSONIG00000029743) ENSONIG00000037008 qrsl1 (ENSONIG00000011726) rtn4ip1 (ENSONIG00000011729) ENSONIG00000011731 ENSONIG00000029029 ENSONIG00000037122 #22 ENSONIG00000034023 CCR6 (ENSONIG00000039168) ENSONIG00000043133 ENSONIG00000035708 #22 ENSONIG00000028221 ENSONIG00000040965 #22 ENSONIG00000011733 #22 ENSONIG00000038067 #22 rcor1 (ENSONIG00000011789) traf3 (ENSONIG00000011785) ENSONIG00000030494 ENSONIG00000032688 ENSONIG00000037687 ENSONIG00000034290 ENSONIG00000020536 lrrc57 (ENSONIG00000038185) ENSONIG00000011776 srp54 (ENSONIG00000011768) sec23a (ENSONIG00000011758) Cichlidae DUPLICATION Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a #22 Haplochromini DUPLICATION Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a.a #22 Burton s mouthbrooder MODERN SPECIES 1226 ENSHBUG00000009774 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a.a #22 P. nyererei MODERN SPECIES 882 ENSPNYG00000002560 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a.a #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.a.b #22 Burton s mouthbrooder MODERN SPECIES 1958 ENSHBUG00000020009 #22 Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 Burton s mouthbrooder MODERN SPECIES 16 ENSHBUG00000007767 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 P. nyererei MODERN SPECIES 1002 ENSPNYG00000018951 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.a.b #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Midas cichlid MODERN SPECIES 42 ENSACIG00000010992 #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.b #22 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 412 ENSACIG00000008165 #22 ENSACIG00000008135 ENSACIG00000008122 ENSACIG00000008103 ndrg4 (ENSACIG00000008081) gins3 (ENSACIG00000008070) znrf1 (ENSACIG00000008042) ldhd (ENSACIG00000008020) ENSACIG00000007999 arpin (ENSACIG00000007984) anpeplb (ENSACIG00000007940) si:dkey-12e7.1 (ENSACIG00000007934) chka (ENSACIG00000007909) cetp (ENSACIG00000007874) herpud1 (ENSACIG00000007848) slc12a3 (ENSACIG00000007788) Midas cichlid MODERN SPECIES 1020 NXPE3 (ENSACIG00000023787) ENSACIG00000023786 krr1 (ENSACIG00000023780) ENSACIG00000023774 ENSACIG00000023768 SYT14 (ENSACIG00000023766) sdsl (ENSACIG00000023761) ENSACIG00000023758 ppp1r13ba (ENSACIG00000023754) ptp4a2a (ENSACIG00000023751) gjb9a (ENSACIG00000023748) marcksl1a (ENSACIG00000023744) bsdc1 (ENSACIG00000023741) olig4 (ENSACIG00000023738) FNDC5 (ENSACIG00000023735) ENSACIG00000023724 #22 ldlrap1b (ENSACIG00000023714) maco1b (ENSACIG00000023707) rhd (ENSACIG00000023704) tmem50a (ENSACIG00000023700) mgst3b (ENSACIG00000023697) ENSACIG00000023692 syf2 (ENSACIG00000023688) runx3 (ENSACIG00000023683) clic4 (ENSACIG00000023438) ENSACIG00000023398 tdh2 (ENSACIG00000023390) zgc:154055 (ENSACIG00000023380) FAM167B (ENSACIG00000023377) lck (ENSACIG00000023371) hdac1 (ENSACIG00000023366) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.b #22 Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.a.b.b #22 Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 1925 ENSHBUG00000021043 #22 Burton s mouthbrooder MODERN SPECIES 317 ENSHBUG00000020873 ENSHBUG00000020856 gnmt (ENSHBUG00000020847) ENSHBUG00000020831 SYT14 (ENSHBUG00000020823) sdsl (ENSHBUG00000020792) ppp1r13ba (ENSHBUG00000020780) ENSHBUG00000020747 ptp4a2a (ENSHBUG00000020741) gjb9a (ENSHBUG00000020725) marcksl1a (ENSHBUG00000020710) bsdc1 (ENSHBUG00000020704) olig4 (ENSHBUG00000000902) FNDC5 (ENSHBUG00000020663) ENSHBUG00000020649 ENSHBUG00000020640 #22 ldlrap1b (ENSHBUG00000020615) maco1b (ENSHBUG00000020587) rhd (ENSHBUG00000020540) tmem50a (ENSHBUG00000020516) mgst3b (ENSHBUG00000020497) rsrp1 (ENSHBUG00000020488) syf2 (ENSHBUG00000020477) runx3 (ENSHBUG00000020440) clic4 (ENSHBUG00000020400) srrm1 (ENSHBUG00000020364) ENSHBUG00000020354 tdh2 (ENSHBUG00000020348) zgc:154055 (ENSHBUG00000020335) FAM167B (ENSHBUG00000020323) lck (ENSHBUG00000020310) Cichlidae DUPLICATION Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Lyretail cichlid MODERN SPECIES 575 ENSNBRG00000022115 ENSNBRG00000022107 ENSNBRG00000022096 #22 ENSNBRG00000022092 #22 ENSNBRG00000022088 ENSNBRG00000022072 #22 ENSNBRG00000022060 #22 ENSNBRG00000022035 #22 ENSNBRG00000022012 #22 ENSNBRG00000021988 #22 ENSNBRG00000021962 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Burton s mouthbrooder MODERN SPECIES 1950 ENSHBUG00000020228 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.a.b.a #22 Zebra mbuna MODERN SPECIES 651 ENSMZEG00005013539 #22 ENSMZEG00005013307 #22 ENSMZEG00005013284 #22 P. nyererei MODERN SPECIES 1082 ENSPNYG00000021714 #22 Nile tilapia MODERN SPECIES 10 ZDHHC14 (ENSONIG00000008067) LGALS8 (ENSONIG00000029743) ENSONIG00000037008 qrsl1 (ENSONIG00000011726) rtn4ip1 (ENSONIG00000011729) ENSONIG00000011731 ENSONIG00000029029 ENSONIG00000037122 #22 ENSONIG00000034023 CCR6 (ENSONIG00000039168) ENSONIG00000043133 ENSONIG00000035708 #22 ENSONIG00000028221 ENSONIG00000040965 #22 ENSONIG00000011733 #22 ENSONIG00000038067 #22 rcor1 (ENSONIG00000011789) traf3 (ENSONIG00000011785) ENSONIG00000030494 ENSONIG00000032688 ENSONIG00000037687 ENSONIG00000034290 ENSONIG00000020536 lrrc57 (ENSONIG00000038185) ENSONIG00000011776 srp54 (ENSONIG00000011768) sec23a (ENSONIG00000011758) tyro3 (ENSONIG00000011751) ENSONIG00000041427 ENSONIG00000011745 atg14 (ENSONIG00000011743) Cichlidae ANCESTRAL SPECIES 23 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000166171 ENSGT00940000158416.r.l ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r.k.a ENSGT00940000158416.r.k.b ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r.k.a ENSGT00940000158416.r.k.b.b ENSGT00940000158416.r.k.b.a ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Haplochromini ANCESTRAL SPECIES 7 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r.k.a ENSGT00940000158416.r.k.b.a ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r.k.a ENSGT00940000158416.r.k.b.a ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Haplochromini_B ANCESTRAL SPECIES 37 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000157581.a ENSGT00940000155745 ENSGT00940000155979.g ENSGT00940000158416.r.k.a ENSGT00940000158416.r.k.b.b ENSGT00940000158416.r.k.b.a ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.a.b.a.b.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000180265 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000004717 ENSGT00950000182834.A.a.a ENSGT00390000008920.c.a ENSGT00940000157224.ab ENSGT00830000128402 ENSGT00940000164487 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 10 babam2 (ENSACLG00000025902) fosl2 (ENSACLG00000025936) matn3b (ENSACLG00000025978) wdr35 (ENSACLG00000026024) kcns3a (ENSACLG00000026118) ENSACLG00000026127 ENSACLG00000026143 ENSACLG00000026158 ENSACLG00000026166 ENSACLG00000026172 odc1 (ENSACLG00000026182) nol10 (ENSACLG00000026238) ATP6V1C2 (ENSACLG00000026353) KCNF1 (ENSACLG00000026668) mocs1 (ENSACLG00000026679) ENSACLG00000026694 #22 ENSACLG00000026716 #22 DAAM2 (ENSACLG00000026750) ENSACLG00000026830 ENSACLG00000026834 KCNK16 (ENSACLG00000026845) ENSACLG00000026857 kcnk5a (ENSACLG00000026882) DCTN1 (ENSACLG00000026905) ENSACLG00000027081 ENSACLG00000027086 cdkn3 (ENSACLG00000027099) cnih1 (ENSACLG00000027112) gmfb (ENSACLG00000027125) lgals3a (ENSACLG00000027133) synj2bp (ENSACLG00000027147) Eastern happy MODERN SPECIES 10 fosl2 (ENSACLG00000025936) matn3b (ENSACLG00000025978) wdr35 (ENSACLG00000026024) kcns3a (ENSACLG00000026118) ENSACLG00000026127 ENSACLG00000026143 ENSACLG00000026158 ENSACLG00000026166 ENSACLG00000026172 odc1 (ENSACLG00000026182) nol10 (ENSACLG00000026238) ATP6V1C2 (ENSACLG00000026353) KCNF1 (ENSACLG00000026668) mocs1 (ENSACLG00000026679) ENSACLG00000026694 #22 ENSACLG00000026716 #22 DAAM2 (ENSACLG00000026750) ENSACLG00000026830 ENSACLG00000026834 KCNK16 (ENSACLG00000026845) ENSACLG00000026857 kcnk5a (ENSACLG00000026882) DCTN1 (ENSACLG00000026905) ENSACLG00000027081 ENSACLG00000027086 cdkn3 (ENSACLG00000027099) cnih1 (ENSACLG00000027112) gmfb (ENSACLG00000027125) lgals3a (ENSACLG00000027133) synj2bp (ENSACLG00000027147) ENSACLG00000027156 Lyretail cichlid MODERN SPECIES 353 ENSNBRG00000011359 mrpl33 (ENSNBRG00000011414) rbks (ENSNBRG00000011380) babam2 (ENSNBRG00000011422) ENSNBRG00000011447 fosl2 (ENSNBRG00000011462) matn3b (ENSNBRG00000011475) wdr35 (ENSNBRG00000011502) ENSNBRG00000011581 ENSNBRG00000011597 odc1 (ENSNBRG00000011620) nol10 (ENSNBRG00000011660) ATP6V1C2 (ENSNBRG00000011749) KCNF1 (ENSNBRG00000011992) mocs1 (ENSNBRG00000012004) ENSNBRG00000012048 #22 DAAM2 (ENSNBRG00000012062) kif6 (ENSNBRG00000012116) KCNK16 (ENSNBRG00000012145) kcnk5a (ENSNBRG00000012191) Nile tilapia MODERN SPECIES 10 mrpl33 (ENSONIG00000036327) rbks (ENSONIG00000019547) babam2 (ENSONIG00000019548) fosl2 (ENSONIG00000019549) ENSONIG00000027876 ENSONIG00000041388 matn3b (ENSONIG00000019550) wdr35 (ENSONIG00000019551) ENSONIG00000019553 ENSONIG00000019554 odc1 (ENSONIG00000019555) nol10 (ENSONIG00000019556) ENSONIG00000028615 ATP6V1C2 (ENSONIG00000019557) KCNF1 (ENSONIG00000030789) ENSONIG00000019559 #22 mocs1 (ENSONIG00000019558) DAAM2 (ENSONIG00000019560) kif6 (ENSONIG00000019563) KCNK16 (ENSONIG00000019566) ENSONIG00000019567 kcnk5a (ENSONIG00000019568) DCTN1 (ENSONIG00000019569) ENSONIG00000021199 slc39a8 (ENSONIG00000019574) cdkn3 (ENSONIG00000019575) cnih1 (ENSONIG00000036646) gmfb (ENSONIG00000032629) lgals3a (ENSONIG00000019580) synj2bp (ENSONIG00000028143) ENSONIG00000019582 Midas cichlid MODERN SPECIES 186 mrpl33 (ENSACIG00000011015) rbks (ENSACIG00000011052) babam2 (ENSACIG00000011080) fosl2 (ENSACIG00000011097) ENSACIG00000011109 matn3b (ENSACIG00000011129) wdr35 (ENSACIG00000011145) kcns3a (ENSACIG00000011197) ENSACIG00000011202 ENSACIG00000011218 odc1 (ENSACIG00000011238) nol10 (ENSACIG00000011256) ATP6V1C2 (ENSACIG00000011309) KCNF1 (ENSACIG00000011459) mocs1 (ENSACIG00000011470) ENSACIG00000011491 #22 DAAM2 (ENSACIG00000011527) kif6 (ENSACIG00000011584) tsr3 (ENSACIG00000011629) KCNK16 (ENSACIG00000011639) ENSACIG00000011663 kcnk5a (ENSACIG00000011694) DCTN1 (ENSACIG00000011725) ENSACIG00000011773 ENSACIG00000011781 cdkn3 (ENSACIG00000011804) cnih1 (ENSACIG00000011828) gmfb (ENSACIG00000011844) lgals3a (ENSACIG00000011857) synj2bp (ENSACIG00000011867) ENSACIG00000011874 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Haplochromini DUPLICATION Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.a #22 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 153 ENSGT00950000183007.b.f.b.a.b.a.a.a.a.b.a.a #22 ENSGT00950000183007.b.f.b.a.b.a.a.a.b #22 ENSGT01030000234934.c ENSGT00950000183007.b.f.b.a.b.b.a.a #22 Eastern happy MODERN SPECIES 10 ARHGEF10 (ENSACLG00000018226) KBTBD11 (ENSACLG00000018222) ARID1B (ENSACLG00000018149) ZDHHC14 (ENSACLG00000018063) LGALS8 (ENSACLG00000018037) qrsl1 (ENSACLG00000018009) alkbh1 (ENSACLG00000017932) rtn4ip1 (ENSACLG00000017885) ENSACLG00000017817 ENSACLG00000017807 #22 ENSACLG00000017805 ENSACLG00000017785 #22 ENSACLG00000017734 #22 ENSACLG00000017700 #22 ENSACLG00000017670 ENSACLG00000017650 #22 ENSACLG00000017608 ENSACLG00000017575 #22 ENSACLG00000017557 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) GPR68 (ENSACLG00000016959) GPR68 (ENSACLG00000016923) ENSACLG00000016915 ccdc88c (ENSACLG00000016821) Zebra mbuna MODERN SPECIES 1101 slc4a11 (ENSMZEG00005003156) ENSMZEG00005003263 rpia (ENSMZEG00005003282) EIF2AK3 (ENSMZEG00005003312) ATRN (ENSMZEG00005003375) gfra4a (ENSMZEG00005003463) ENSMZEG00005003472 ENSMZEG00005003508 ENSMZEG00005003532 ENSMZEG00005003558 ENSMZEG00005003567 #22 ENSMZEG00005003591 #22 ENSMZEG00005003660 #22 ENSMZEG00005003829 ENSMZEG00005003854 ENSMZEG00005003870 #22 ENSMZEG00005003910 ENSMZEG00005003945 #22 CCR6 (ENSMZEG00005003972) PXDN (ENSMZEG00005004087) MYT1L (ENSMZEG00005004218) eipr1 (ENSMZEG00005004333) trappc12 (ENSMZEG00005004380) adi1 (ENSMZEG00005004422) DNAL1 (ENSMZEG00005004431) pth2 (ENSMZEG00005004462) ENSMZEG00005004474 ENSMZEG00005004520 ENSMZEG00005004601 slirp (ENSMZEG00005004617) alkbh1 (ENSMZEG00005004627) Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.a.b #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Burton s mouthbrooder MODERN SPECIES 600 ccdc88c (ENSHBUG00000006965) ENSHBUG00000006911 ENSHBUG00000006905 GPR68 (ENSHBUG00000006886) DGLUCY (ENSHBUG00000006876) APOB (ENSHBUG00000006855) ldah (ENSHBUG00000006819) GDF7 (ENSHBUG00000006784) ENSHBUG00000006760 #22 ENSHBUG00000006741 ENSHBUG00000006710 ENSHBUG00000006566 ENSHBUG00000006546 ENSHBUG00000006523 adi1 (ENSHBUG00000006474) trappc12 (ENSHBUG00000006509) eipr1 (ENSHBUG00000006455) MYT1L (ENSHBUG00000006413) PXDN (ENSHBUG00000006318) CCR6 (ENSHBUG00000006244) ENSHBUG00000006242 #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.b #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b.b #22 Zebra mbuna MODERN SPECIES 118 ENSMZEG00005027747 #22 ENSMZEG00005027744 #22 ENSMZEG00005027742 #22 ENSMZEG00005027737 #22 ENSMZEG00005027736 #22 ENSMZEG00005027735 ENSMZEG00005027732 #22 ENSMZEG00005027730 #22 ENSMZEG00005027729 #22 ENSMZEG00005027728 #22 ENSMZEG00005027726 ENSMZEG00005027724 #22 ENSMZEG00005027722 ENSMZEG00005027717 #22 CCR6 (ENSMZEG00005027716) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Eupercaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Perciformes ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Perciformes_a ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.a.b.b #22 Pike perch MODERN SPECIES 39 mrpl33 (ENSSLUG00000012223) rbks (ENSSLUG00000012228) babam2 (ENSSLUG00000012238) fosl2 (ENSSLUG00000012265) kcns3a (ENSSLUG00000012272) wdr35 (ENSSLUG00000012283) ENSSLUG00000012315 ENSSLUG00000012349 odc1 (ENSSLUG00000012358) nol10 (ENSSLUG00000012407) ATP6V1C2 (ENSSLUG00000012440) KCNF1 (ENSSLUG00000012449) mocs1 (ENSSLUG00000012468) ENSSLUG00000012502 #22 ENSSLUG00000012505 #22 ENSSLUG00000012507 #22 DAAM2 (ENSSLUG00000012547) kif6 (ENSSLUG00000012617) KCNK16 (ENSSLUG00000012637) kcnk5a (ENSSLUG00000012645) rab3gap2 (ENSSLUG00000012863) iars2 (ENSSLUG00000018049) qrsl1 (ENSSLUG00000018177) rtn4ip1 (ENSSLUG00000018618) ENSSLUG00000018653 CCR6 (ENSSLUG00000018734) PXDN (ENSSLUG00000018753) ENSSLUG00000018862 eipr1 (ENSSLUG00000018867) trappc12 (ENSSLUG00000018915) adi1 (ENSSLUG00000019032) Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Cyprinodontoidei DUPLICATION Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876.e ENSGT00940000158876.f ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Poecilia ANCESTRAL SPECIES 10 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876.e ENSGT00940000158876.f ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 NAME_6 ANCESTRAL SPECIES 6 ENSGT00940000158876.f ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000158008.e ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Sailfin molly MODERN SPECIES 614 MATN3 (ENSPLAG00000023044) ENSPLAG00000023127 odc1 (ENSPLAG00000023160) nol10 (ENSPLAG00000023264) ATP6V1C2 (ENSPLAG00000023348) KCNF1 (ENSPLAG00000023361) mocs1 (ENSPLAG00000023408) ENSPLAG00000023485 #22 DAAM2 (ENSPLAG00000023621) kif6 (ENSPLAG00000023638) Amazon molly MODERN SPECIES 260 rbks (ENSPFOG00000011047) fosl2 (ENSPFOG00000010981) kcns3a (ENSPFOG00000010969) wdr35 (ENSPFOG00000010656) babam2 (ENSPFOG00000011002) fosl2 (ENSPFOG00000022460) kcns3a (ENSPFOG00000010612) wdr35 (ENSPFOG00000010224) ENSPFOG00000010098 ENSPFOG00000009925 odc1 (ENSPFOG00000009860) nol10 (ENSPFOG00000009689) ATP6V1C2 (ENSPFOG00000009488) KCNF1 (ENSPFOG00000020419) mocs1 (ENSPFOG00000009235) ENSPFOG00000009211 #22 DAAM2 (ENSPFOG00000008611) kif6 (ENSPFOG00000008237) KCNK16 (ENSPFOG00000008139) ENSPFOG00000008119 kcnk5a (ENSPFOG00000008079) rab3gap2 (ENSPFOG00000006855) iars2 (ENSPFOG00000007310) qrsl1 (ENSPFOG00000006595) rtn4ip1 (ENSPFOG00000006405) ENSPFOG00000006162 CCR6 (ENSPFOG00000006146) PXDN (ENSPFOG00000005747) MYT1L (ENSPFOG00000005354) eipr1 (ENSPFOG00000005203) trappc12 (ENSPFOG00000005023) Guppy MODERN SPECIES 453 ENSPREG00000004874 ENSPREG00000004849 mrpl33 (ENSPREG00000004811) rbks (ENSPREG00000004782) ENSPREG00000004766 babam2 (ENSPREG00000004742) fosl2 (ENSPREG00000004720) kcns3a (ENSPREG00000004700) wdr35 (ENSPREG00000004566) matn3b (ENSPREG00000004515) odc1 (ENSPREG00000004500) nol10 (ENSPREG00000004461) ATP6V1C2 (ENSPREG00000004415) KCNF1 (ENSPREG00000004407) mocs1 (ENSPREG00000004377) ENSPREG00000004364 #22 ENSPREG00000004310 #22 DAAM2 (ENSPREG00000004133) kif6 (ENSPREG00000004075) KCNK16 (ENSPREG00000004038) ENSPREG00000004019 kcnk5a (ENSPREG00000003988) rab3gap2 (ENSPREG00000003942) iars2 (ENSPREG00000003827) qrsl1 (ENSPREG00000003779) rtn4ip1 (ENSPREG00000003745) ENSPREG00000003695 CCR6 (ENSPREG00000003671) PXDN (ENSPREG00000003584) MYT1L (ENSPREG00000003428) ENSPREG00000003390 NAME_4 ANCESTRAL SPECIES 56 ENSGT00940000155320 ENSGT00390000001612 ENSGT01060000248694 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813.b ENSGT00940000164048 ENSGT00940000159813.a ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a Mummichog MODERN SPECIES 2480 mrpl33 (ENSFHEG00000009336) rbks (ENSFHEG00000009307) babam2 (ENSFHEG00000009294) fosl2 (ENSFHEG00000009275) wdr35 (ENSFHEG00000009252) matn3b (ENSFHEG00000009172) ENSFHEG00000009140 ENSFHEG00000009021 odc1 (ENSFHEG00000008924) nol10 (ENSFHEG00000008899) ATP6V1C2 (ENSFHEG00000008721) KCNF1 (ENSFHEG00000008696) mocs1 (ENSFHEG00000008675) ENSFHEG00000008579 #22 ENSFHEG00000008542 #22 DAAM2 (ENSFHEG00000008505) kif6 (ENSFHEG00000008469) KCNK16 (ENSFHEG00000008447) ENSFHEG00000008405 kcnk5a (ENSFHEG00000008342) rab3gap2 (ENSFHEG00000008319) iars2 (ENSFHEG00000000205) qrsl1 (ENSFHEG00000007993) rtn4ip1 (ENSFHEG00000007937) ENSFHEG00000007840 Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876.e ENSGT00940000158876.f ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Poecilia ANCESTRAL SPECIES 10 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876.e ENSGT00940000158876.f ENSGT00940000155979.g ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813 ENSGT00940000164048 ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 Guppy MODERN SPECIES 453 ENSPREG00000004849 mrpl33 (ENSPREG00000004811) rbks (ENSPREG00000004782) ENSPREG00000004766 babam2 (ENSPREG00000004742) fosl2 (ENSPREG00000004720) kcns3a (ENSPREG00000004700) wdr35 (ENSPREG00000004566) matn3b (ENSPREG00000004515) odc1 (ENSPREG00000004500) nol10 (ENSPREG00000004461) ATP6V1C2 (ENSPREG00000004415) KCNF1 (ENSPREG00000004407) mocs1 (ENSPREG00000004377) ENSPREG00000004364 #22 ENSPREG00000004310 #22 DAAM2 (ENSPREG00000004133) kif6 (ENSPREG00000004075) KCNK16 (ENSPREG00000004038) ENSPREG00000004019 kcnk5a (ENSPREG00000003988) rab3gap2 (ENSPREG00000003942) iars2 (ENSPREG00000003827) qrsl1 (ENSPREG00000003779) rtn4ip1 (ENSPREG00000003745) ENSPREG00000003695 CCR6 (ENSPREG00000003671) PXDN (ENSPREG00000003584) MYT1L (ENSPREG00000003428) ENSPREG00000003390 eipr1 (ENSPREG00000003357) NAME_4 ANCESTRAL SPECIES 56 ENSGT00390000001612 ENSGT01060000248694 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155745 ENSGT00940000157581.a ENSGT00940000158416.r ENSGT00950000182995.e.a.a.a ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000160213.a ENSGT00390000016567.n ENSGT00950000183007.b.f.b.b.a.a #22 ENSGT00950000183007.b.f.b.b.a.b #22 ENSGT00940000157801 ENSGT00940000157697 ENSGT00940000159813.b ENSGT00940000164048 ENSGT00940000159813.a ENSGT00940000156775.e ENSGT00390000005794 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 2091 ENSCVAG00000000472 #22 ENSCVAG00000018094 #22 Sheepshead minnow MODERN SPECIES 222 gphb5 (ENSCVAG00000010590) ENSCVAG00000010602 ENSCVAG00000010610 ENSCVAG00000010630 ENSCVAG00000010661 ENSCVAG00000010681 esr2b (ENSCVAG00000010717) ENSCVAG00000010732 ENSCVAG00000010758 SGPP1 (ENSCVAG00000010830) ppp2r5eb (ENSCVAG00000010873) zgc:112255 (ENSCVAG00000010891) mocs1 (ENSCVAG00000010917) ENSCVAG00000010948 #22 ENSCVAG00000011026 #22 ENSCVAG00000011039 #22 dhcr7 (ENSCVAG00000011086) ENSCVAG00000011213 Mummichog MODERN SPECIES 2480 mrpl33 (ENSFHEG00000009336) rbks (ENSFHEG00000009307) babam2 (ENSFHEG00000009294) fosl2 (ENSFHEG00000009275) wdr35 (ENSFHEG00000009252) matn3b (ENSFHEG00000009172) ENSFHEG00000009140 ENSFHEG00000009021 odc1 (ENSFHEG00000008924) nol10 (ENSFHEG00000008899) ATP6V1C2 (ENSFHEG00000008721) KCNF1 (ENSFHEG00000008696) mocs1 (ENSFHEG00000008675) ENSFHEG00000008579 #22 ENSFHEG00000008542 #22 DAAM2 (ENSFHEG00000008505) kif6 (ENSFHEG00000008469) KCNK16 (ENSFHEG00000008447) ENSFHEG00000008405 kcnk5a (ENSFHEG00000008342) rab3gap2 (ENSFHEG00000008319) iars2 (ENSFHEG00000000205) qrsl1 (ENSFHEG00000007993) rtn4ip1 (ENSFHEG00000007937) ENSFHEG00000007840 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Mangrove rivulus DUPLICATION Mangrove rivulus DUPLICATION Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 159 fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 CCR6 (ENSKMAG00000002495) PXDN (ENSKMAG00000002384) MYT1L (ENSKMAG00000002343) eipr1 (ENSKMAG00000002298) Mangrove rivulus MODERN SPECIES 159 rbks (ENSKMAG00000003888) babam2 (ENSKMAG00000003805) fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 CCR6 (ENSKMAG00000002495) PXDN (ENSKMAG00000002384) Mangrove rivulus MODERN SPECIES 159 babam2 (ENSKMAG00000003805) fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 CCR6 (ENSKMAG00000002495) PXDN (ENSKMAG00000002384) MYT1L (ENSKMAG00000002343) Mangrove rivulus DUPLICATION Mangrove rivulus DUPLICATION Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 159 ENSKMAG00000003915 mrpl33 (ENSKMAG00000003900) rbks (ENSKMAG00000003888) babam2 (ENSKMAG00000003805) fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 Mangrove rivulus MODERN SPECIES 159 ENSKMAG00000003915 mrpl33 (ENSKMAG00000003900) rbks (ENSKMAG00000003888) babam2 (ENSKMAG00000003805) fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) Mangrove rivulus MODERN SPECIES 159 kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 CCR6 (ENSKMAG00000002495) PXDN (ENSKMAG00000002384) MYT1L (ENSKMAG00000002343) eipr1 (ENSKMAG00000002298) trappc12 (ENSKMAG00000002223) Mangrove rivulus MODERN SPECIES 159 mrpl33 (ENSKMAG00000003900) rbks (ENSKMAG00000003888) babam2 (ENSKMAG00000003805) fosl2 (ENSKMAG00000003762) kcns3a (ENSKMAG00000003747) wdr35 (ENSKMAG00000003640) matn3b (ENSKMAG00000003600) ENSKMAG00000003564 ENSKMAG00000003528 odc1 (ENSKMAG00000003504) nol10 (ENSKMAG00000003400) KCNF1 (ENSKMAG00000003373) mocs1 (ENSKMAG00000003318) ENSKMAG00000003305 #22 ENSKMAG00000003298 #22 ENSKMAG00000003279 #22 ENSKMAG00000003263 #22 ENSKMAG00000003246 #22 ENSKMAG00000003234 #22 ENSKMAG00000003219 #22 ENSKMAG00000003210 DAAM2 (ENSKMAG00000003078) kif6 (ENSKMAG00000003030) ENSKMAG00000002977 kcnk5a (ENSKMAG00000002941) rab3gap2 (ENSKMAG00000002793) iars2 (ENSKMAG00000002679) qrsl1 (ENSKMAG00000002609) rtn4ip1 (ENSKMAG00000002560) ENSKMAG00000002524 CCR6 (ENSKMAG00000002495) Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.a #22 Midas cichlid MODERN SPECIES 1425 ENSACIG00000017561 #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Poeciliinae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Poecilia ANCESTRAL SPECIES 4 ENSGT00940000155605.a.b ENSGT00390000004700.b ENSGT00940000156491.b ENSGT00940000163104 ENSGT00390000018900 ENSGT00390000001700.b ENSGT00940000165019 ENSGT00940000156992.f ENSGT00940000156766 ENSGT00390000005861.b ENSGT00950000183142.a.b.a.b ENSGT00390000004799 ENSGT00390000000455.b ENSGT00940000155936.a.a.b ENSGT00940000154096.a ENSGT00950000183007.b.f.b.b.b #22 ENSGT01070000253766.A.a.a.b.a.a ENSGT00390000009571.a.b.a.b.g.a.a.b.b.b ENSGT00390000009571.a.b.a.b.g.a.a.b.b.a ENSGT00940000158680 ENSGT00390000017953.B ENSGT00940000167557 ENSGT00940000166224 ENSGT00940000156560.g ENSGT00730000111187.a.b ENSGT00940000157082 ENSGT00940000156958 ENSGT00390000009258 ENSGT00940000157680 ENSGT00940000156048.e.a.a.a.b ENSGT00390000003512.q NAME_6 ANCESTRAL SPECIES 371 ENSGT00940000156992.f ENSGT00940000156766 ENSGT00390000005861.b ENSGT00950000183142.a.b.a.b ENSGT00390000004799 ENSGT00390000000455.b ENSGT00940000155936.a.a.b ENSGT00940000154096.a ENSGT00950000183007.b.f.b.b.b #22 ENSGT01070000253766.A.a.a.b.a.a.j Amazon molly MODERN SPECIES 788 KIF26B (ENSPFOG00000022380) SMYD3 (ENSPFOG00000010727) ENSPFOG00000010808 tfb2m (ENSPFOG00000010834) sccpdha.1 (ENSPFOG00000010906) gcfc2 (ENSPFOG00000010976) itsn2b (ENSPFOG00000011132) ENSPFOG00000011695 ENSPFOG00000011708 #22 Sailfin molly MODERN SPECIES 626 KIF26B (ENSPLAG00000017131) SMYD3 (ENSPLAG00000016890) ENSPLAG00000016846 tfb2m (ENSPLAG00000000382) sccpdha.1 (ENSPLAG00000016812) gcfc2 (ENSPLAG00000000378) itsn2b (ENSPLAG00000016611) ENSPLAG00000016211 ENSPLAG00000016196 #22 ENSPLAG00000016125 Guppy MODERN SPECIES 455 ENSPREG00000011176 ENSPREG00000011136 AHCTF1 (ENSPREG00000011043) ENSPREG00000011012 KIF26B (ENSPREG00000010926) ENSPREG00000010896 SMYD3 (ENSPREG00000010883) ENSPREG00000010864 tfb2m (ENSPREG00000010841) sccpdha.1 (ENSPREG00000010800) gcfc2 (ENSPREG00000010758) ENSPREG00000010738 itsn2b (ENSPREG00000010708) ENSPREG00000010647 ENSPREG00000010632 ENSPREG00000010622 #22 ENSPREG00000010607 ENSPREG00000010592 ENSPREG00000010580 ENSPREG00000010565 ENSPREG00000010548 ENSPREG00000010523 ctsba (ENSPREG00000010479) ENSPREG00000010463 efcab2 (ENSPREG00000010453) ENSPREG00000010438 ENSPREG00000010423 ENSPREG00000010397 smyd2a (ENSPREG00000010363) galnt2 (ENSPREG00000010296) urb2 (ENSPREG00000010268) NAME_4 ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Sheepshead minnow DUPLICATION Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 222 ENSCVAG00000011213 dhcr7 (ENSCVAG00000011086) ENSCVAG00000011039 #22 ENSCVAG00000011026 #22 ENSCVAG00000010948 #22 mocs1 (ENSCVAG00000010917) zgc:112255 (ENSCVAG00000010891) ppp2r5eb (ENSCVAG00000010873) SGPP1 (ENSCVAG00000010830) ENSCVAG00000010758 ENSCVAG00000010732 esr2b (ENSCVAG00000010717) ENSCVAG00000010681 ENSCVAG00000010661 ENSCVAG00000010630 ENSCVAG00000010610 ENSCVAG00000010602 gphb5 (ENSCVAG00000010590) KCNH5 (ENSCVAG00000010579) ENSCVAG00000010544 Sheepshead minnow MODERN SPECIES 222 ENSCVAG00000011213 dhcr7 (ENSCVAG00000011086) ENSCVAG00000011039 #22 ENSCVAG00000011026 #22 ENSCVAG00000010948 #22 mocs1 (ENSCVAG00000010917) zgc:112255 (ENSCVAG00000010891) ppp2r5eb (ENSCVAG00000010873) SGPP1 (ENSCVAG00000010830) ENSCVAG00000010758 ENSCVAG00000010732 esr2b (ENSCVAG00000010717) ENSCVAG00000010681 ENSCVAG00000010661 ENSCVAG00000010630 ENSCVAG00000010610 ENSCVAG00000010602 gphb5 (ENSCVAG00000010590) KCNH5 (ENSCVAG00000010579) Sheepshead minnow MODERN SPECIES 2091 ENSCVAG00000018094 #22 ENSCVAG00000000472 #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Eupercaria ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00950000183007.b.f.b.b.b #22 Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 slc52a2 (ENSTNIG00000002930) ENSTNIG00000000337 ENSTNIG00000002931 ENSTNIG00000002932 entpd1 (ENSTNIG00000002933) ENSTNIG00000002934 ENSTNIG00000002946 rpz4 (ENSTNIG00000019421) ENSTNIG00000002947 ZNF536 (ENSTNIG00000002948) adgra2 (ENSTNIG00000002949) ENSTNIG00000002950 NHERF1 (ENSTNIG00000002951) ENSTNIG00000002952 ENSTNIG00000005203 ENSTNIG00000002956 #22 rps18 (ENSTNIG00000002957) VPS52 (ENSTNIG00000002958) ENSTNIG00000002959 golga1 (ENSTNIG00000002965) rpl35 (ENSTNIG00000002966) olfml2a (ENSTNIG00000002967) ppp1r8b (ENSTNIG00000002968) ENSTNIG00000001549 ENSTNIG00000002978 ENSTNIG00000000926 ENSTNIG00000002979 ENSTNIG00000002980 #22 zgc:56622 (ENSTNIG00000002982) ei24 (ENSTNIG00000002983) stt3a (ENSTNIG00000002984) Tetraodon MODERN SPECIES 26 ENSTNIG00000004143 pdk2b (ENSTNIG00000004142) ENSTNIG00000001595 neu1 (ENSTNIG00000004137) ENSTNIG00000001251 ENSTNIG00000004128 ENSTNIG00000001551 ENSTNIG00000001627 nlk2 (ENSTNIG00000004124) ENSTNIG00000004116 ENSTNIG00000004115 poli (ENSTNIG00000004113) RAB27B (ENSTNIG00000004112) ST8SIA3 (ENSTNIG00000004111) CCNG2 (ENSTNIG00000004110) ENSTNIG00000000212 #22 gnb3b (ENSTNIG00000004096) CHD4 (ENSTNIG00000004095) ENSTNIG00000004089 polr3e (ENSTNIG00000004088) eef2k (ENSTNIG00000004087) ENSTNIG00000004086 PAIP2B (ENSTNIG00000000989) ENSTNIG00000004085 slc16a10 (ENSTNIG00000004084) ENSTNIG00000004083 TMEM121B (ENSTNIG00000004082) ENSTNIG00000004081 dnajc28 (ENSTNIG00000004080) ENSTNIG00000000020 lsr (ENSTNIG00000004079) Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000003008 DNTTIP1 (ENSTNIG00000002995) polr2j (ENSTNIG00000002994) ube2c (ENSTNIG00000002993) zgc:109913 (ENSTNIG00000002992) snrpb (ENSTNIG00000002991) ENSTNIG00000002990 ctsa (ENSTNIG00000002989) KCNQ2 (ENSTNIG00000002988) ddx27 (ENSTNIG00000002987) pltp (ENSTNIG00000002986) ENSTNIG00000002985 stt3a (ENSTNIG00000002984) ei24 (ENSTNIG00000002983) zgc:56622 (ENSTNIG00000002982) ENSTNIG00000002980 #22 ENSTNIG00000002979 ENSTNIG00000000926 ENSTNIG00000002978 ENSTNIG00000001549 ppp1r8b (ENSTNIG00000002968) olfml2a (ENSTNIG00000002967) rpl35 (ENSTNIG00000002966) golga1 (ENSTNIG00000002965) ENSTNIG00000002959 VPS52 (ENSTNIG00000002958) rps18 (ENSTNIG00000002957) ENSTNIG00000002956 #22 ENSTNIG00000005203 ENSTNIG00000002952 NHERF1 (ENSTNIG00000002951) Tetraodon MODERN SPECIES 26 ENSTNIG00000002205 ENSTNIG00000002204 PIP5KL1 (ENSTNIG00000002206) sh3glb2b (ENSTNIG00000002203) skp2 (ENSTNIG00000000589) nadk2 (ENSTNIG00000002202) ENSTNIG00000002201 smyd1a (ENSTNIG00000002123) ppp1cbl (ENSTNIG00000002200) ENSTNIG00000002199 psmb6 (ENSTNIG00000001826) ENSTNIG00000001824 CXXC1 (ENSTNIG00000001822) ENSTNIG00000019469 ENSTNIG00000006099 ENSTNIG00000001821 #22 ENSTNIG00000001820 #22 ENSTNIG00000000142 #22 ptrh2 (ENSTNIG00000000826) ENSTNIG00000001818 tshz3b (ENSTNIG00000004737) ZNF507 (ENSTNIG00000003653) DPY19L3 (ENSTNIG00000004332) ENSTNIG00000014203 dhcr7 (ENSTNIG00000010127) MMP15 (ENSTNIG00000010128) ENSTNIG00000010129 slc7a6os (ENSTNIG00000010130) slc7a6 (ENSTNIG00000010131) ENSTNIG00000010132 SYAP1 (ENSTNIG00000010133) Tetraodon MODERN SPECIES 26 CDH8 (ENSTNIG00000010135) phospho2 (ENSTNIG00000010134) SYAP1 (ENSTNIG00000010133) ENSTNIG00000010132 slc7a6 (ENSTNIG00000010131) slc7a6os (ENSTNIG00000010130) ENSTNIG00000010129 MMP15 (ENSTNIG00000010128) dhcr7 (ENSTNIG00000010127) ENSTNIG00000014203 DPY19L3 (ENSTNIG00000004332) ZNF507 (ENSTNIG00000003653) tshz3b (ENSTNIG00000004737) ENSTNIG00000001818 ptrh2 (ENSTNIG00000000826) ENSTNIG00000000142 #22 ENSTNIG00000001820 #22 ENSTNIG00000001821 #22 ENSTNIG00000006099 ENSTNIG00000019469 CXXC1 (ENSTNIG00000001822) ENSTNIG00000001824 psmb6 (ENSTNIG00000001826) ENSTNIG00000002199 ppp1cbl (ENSTNIG00000002200) smyd1a (ENSTNIG00000002123) ENSTNIG00000002201 nadk2 (ENSTNIG00000002202) skp2 (ENSTNIG00000000589) sh3glb2b (ENSTNIG00000002203) PIP5KL1 (ENSTNIG00000002206) Tetraodon MODERN SPECIES 26 phospho2 (ENSTNIG00000010134) SYAP1 (ENSTNIG00000010133) ENSTNIG00000010132 slc7a6 (ENSTNIG00000010131) slc7a6os (ENSTNIG00000010130) ENSTNIG00000010129 MMP15 (ENSTNIG00000010128) dhcr7 (ENSTNIG00000010127) ENSTNIG00000014203 DPY19L3 (ENSTNIG00000004332) ZNF507 (ENSTNIG00000003653) tshz3b (ENSTNIG00000004737) ENSTNIG00000001818 ptrh2 (ENSTNIG00000000826) ENSTNIG00000000142 #22 ENSTNIG00000001820 #22 ENSTNIG00000001821 #22 ENSTNIG00000006099 ENSTNIG00000019469 CXXC1 (ENSTNIG00000001822) ENSTNIG00000001824 psmb6 (ENSTNIG00000001826) ENSTNIG00000002199 ppp1cbl (ENSTNIG00000002200) smyd1a (ENSTNIG00000002123) ENSTNIG00000002201 nadk2 (ENSTNIG00000002202) skp2 (ENSTNIG00000000589) sh3glb2b (ENSTNIG00000002203) PIP5KL1 (ENSTNIG00000002206) ENSTNIG00000002204 Tetraodon MODERN SPECIES 26 NARS1 (ENSTNIG00000002275) NARS1 (ENSTNIG00000002274) ENSTNIG00000002272 nup50 (ENSTNIG00000002271) ENSTNIG00000002269 wnt10b (ENSTNIG00000002268) st3gal7 (ENSTNIG00000002267) ENTPD7 (ENSTNIG00000002266) ENSTNIG00000002265 SNX1 (ENSTNIG00000002264) ENSTNIG00000002262 ENSTNIG00000002261 ENSTNIG00000002259 ENSTNIG00000000064 ENSTNIG00000002258 ENSTNIG00000000695 #22 wls (ENSTNIG00000002257) ENSTNIG00000002256 ENSTNIG00000002255 ENSTNIG00000002323 camk1gb (ENSTNIG00000001925) drd4b (ENSTNIG00000002252) LRRC58 (ENSTNIG00000002251) ENSTNIG00000002250 ENSTNIG00000002249 KIFC3 (ENSTNIG00000002248) ENSTNIG00000002246 ENSTNIG00000002245 ENSTNIG00000002244 ENSTNIG00000001332 ENSTNIG00000002240 Tetraodon MODERN SPECIES 26 atp1a2a (ENSTNIG00000004890) ENSTNIG00000004889 ENSTNIG00000004888 fli1rs (ENSTNIG00000004887) ENSTNIG00000004886 DOCK3 (ENSTNIG00000004884) mkrn2 (ENSTNIG00000004883) FAM107A (ENSTNIG00000004882) ENSTNIG00000000772 ENSTNIG00000004881 smpd4 (ENSTNIG00000004880) DCAF1 (ENSTNIG00000004879) CTNNA2 (ENSTNIG00000004878) tmem167b (ENSTNIG00000004877) MAPK14 (ENSTNIG00000004876) ENSTNIG00000004875 #22 ENSTNIG00000004873 ENSTNIG00000004871 ENSTNIG00000003241 ENSTNIG00000005340 ENSTNIG00000004860 smarca4a (ENSTNIG00000004859) ENSTNIG00000004858 ENSTNIG00000003800 sf3b3 (ENSTNIG00000004857) ENSTNIG00000004856 DBX1 (ENSTNIG00000004855) ckap5 (ENSTNIG00000004854) cstpp1 (ENSTNIG00000004853) mapk8ip1a (ENSTNIG00000004852) cry2 (ENSTNIG00000004851) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000004508 ENSTNIG00000004507 ENSTNIG00000000444 B3GNT2 (ENSTNIG00000004506) commd1 (ENSTNIG00000004505) znhit1 (ENSTNIG00000004500) ENSTNIG00000004499 trnau1apb (ENSTNIG00000000916) fitm1l (ENSTNIG00000004498) ENSTNIG00000004492 HIVEP1 (ENSTNIG00000004491) ENSTNIG00000003839 ift74 (ENSTNIG00000004490) ENSTNIG00000000864 esd (ENSTNIG00000004482) ENSTNIG00000004480 #22 ENSTNIG00000000628 #22 tent4b (ENSTNIG00000004479) ENSTNIG00000004477 ENSTNIG00000004475 lmna (ENSTNIG00000004474) ENSTNIG00000004473 ENSTNIG00000004472 ENSTNIG00000004465 frem2b (ENSTNIG00000004462) PRDM6 (ENSTNIG00000004450) CEP120 (ENSTNIG00000004449) ZNF608 (ENSTNIG00000004448) ENSTNIG00000004444 ENSTNIG00000012931 ENSTNIG00000004426 Tetraodon MODERN SPECIES 26 ENSTNIG00000004425 ENSTNIG00000004426 ENSTNIG00000012931 ENSTNIG00000004444 ZNF608 (ENSTNIG00000004448) CEP120 (ENSTNIG00000004449) PRDM6 (ENSTNIG00000004450) frem2b (ENSTNIG00000004462) ENSTNIG00000004465 ENSTNIG00000004472 ENSTNIG00000004473 lmna (ENSTNIG00000004474) ENSTNIG00000004475 ENSTNIG00000004477 tent4b (ENSTNIG00000004479) ENSTNIG00000000628 #22 ENSTNIG00000004480 #22 esd (ENSTNIG00000004482) ENSTNIG00000000864 ift74 (ENSTNIG00000004490) ENSTNIG00000003839 HIVEP1 (ENSTNIG00000004491) ENSTNIG00000004492 fitm1l (ENSTNIG00000004498) trnau1apb (ENSTNIG00000000916) ENSTNIG00000004499 znhit1 (ENSTNIG00000004500) commd1 (ENSTNIG00000004505) B3GNT2 (ENSTNIG00000004506) ENSTNIG00000000444 ENSTNIG00000004507 Fugu DUPLICATION Fugu DUPLICATION Fugu MODERN SPECIES 11 ENSTRUG00000032213 ENSTRUG00000031506 ENSTRUG00000032878 vrk1 (ENSTRUG00000007835) ENSTRUG00000026546 ak7b (ENSTRUG00000008091) galcb (ENSTRUG00000008387) HHIPL1 (ENSTRUG00000002127) rtn4ip1 (ENSTRUG00000003765) ENSTRUG00000033231 qrsl1 (ENSTRUG00000004015) iars2 (ENSTRUG00000004465) rab3gap2 (ENSTRUG00000005143) kcnk5a (ENSTRUG00000027921) ENSTRUG00000005650 ENSTRUG00000002789 #22 ENSTRUG00000029620 #22 ENSTRUG00000005821 #22 ENSTRUG00000027353 ENSTRUG00000019913 ENSTRUG00000029332 ldah (ENSTRUG00000000578) alkbh1 (ENSTRUG00000029819) slirp (ENSTRUG00000020127) adck1 (ENSTRUG00000000665) nrxn3a (ENSTRUG00000005194) ENSTRUG00000028739 dio2 (ENSTRUG00000033292) osr1 (ENSTRUG00000005046) atp10d (ENSTRUG00000004296) dapp1 (ENSTRUG00000004262) Fugu MODERN SPECIES 11 lamtor3 (ENSTRUG00000004058) dapp1 (ENSTRUG00000004262) atp10d (ENSTRUG00000004296) osr1 (ENSTRUG00000005046) dio2 (ENSTRUG00000033292) ENSTRUG00000028739 nrxn3a (ENSTRUG00000005194) adck1 (ENSTRUG00000000665) slirp (ENSTRUG00000020127) alkbh1 (ENSTRUG00000029819) ldah (ENSTRUG00000000578) ENSTRUG00000029332 ENSTRUG00000019913 ENSTRUG00000027353 ENSTRUG00000005821 #22 ENSTRUG00000029620 #22 ENSTRUG00000002789 #22 ENSTRUG00000005650 kcnk5a (ENSTRUG00000027921) rab3gap2 (ENSTRUG00000005143) iars2 (ENSTRUG00000004465) qrsl1 (ENSTRUG00000004015) ENSTRUG00000033231 rtn4ip1 (ENSTRUG00000003765) HHIPL1 (ENSTRUG00000002127) galcb (ENSTRUG00000008387) ak7b (ENSTRUG00000008091) ENSTRUG00000026546 vrk1 (ENSTRUG00000007835) ENSTRUG00000032878 ENSTRUG00000031506 Fugu MODERN SPECIES 11 commd8 (ENSTRUG00000004045) lamtor3 (ENSTRUG00000004058) dapp1 (ENSTRUG00000004262) atp10d (ENSTRUG00000004296) osr1 (ENSTRUG00000005046) dio2 (ENSTRUG00000033292) ENSTRUG00000028739 nrxn3a (ENSTRUG00000005194) adck1 (ENSTRUG00000000665) slirp (ENSTRUG00000020127) alkbh1 (ENSTRUG00000029819) ldah (ENSTRUG00000000578) ENSTRUG00000029332 ENSTRUG00000019913 ENSTRUG00000027353 ENSTRUG00000005821 #22 ENSTRUG00000029620 #22 ENSTRUG00000002789 #22 ENSTRUG00000005650 kcnk5a (ENSTRUG00000027921) rab3gap2 (ENSTRUG00000005143) iars2 (ENSTRUG00000004465) qrsl1 (ENSTRUG00000004015) ENSTRUG00000033231 rtn4ip1 (ENSTRUG00000003765) HHIPL1 (ENSTRUG00000002127) galcb (ENSTRUG00000008387) ak7b (ENSTRUG00000008091) ENSTRUG00000026546 vrk1 (ENSTRUG00000007835) ENSTRUG00000032878 Pinecone sodierfish DUPLICATION Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005019738 ENSMMDG00005019740 clcn4 (ENSMMDG00005019786) ENSMMDG00005021501 CLASP1 (ENSMMDG00005021516) ENSMMDG00005021541 INHBB (ENSMMDG00005021550) RALB (ENSMMDG00005021555) faimb (ENSMMDG00005021558) AGAP1 (ENSMMDG00005021582) gbx2 (ENSMMDG00005022206) iqca1 (ENSMMDG00005022207) ACKR3 (ENSMMDG00005022208) ENSMMDG00005022209 #22 ENSMMDG00005022210 #22 ENSMMDG00005022211 #22 trim63a (ENSMMDG00005022212) mlpha (ENSMMDG00005022215) ENSMMDG00005022217 KLHL10 (ENSMMDG00005022219) st6gal2b (ENSMMDG00005022221) ENSMMDG00005022223 nck2b (ENSMMDG00005022226) dph3 (ENSMMDG00005022230) ENSMMDG00005022235 ENSMMDG00005022237 fhl2b (ENSMMDG00005022240) ENSMMDG00005022243 ENSMMDG00005022250 KIF5C (ENSMMDG00005022336) MBD5 (ENSMMDG00005022339) Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005019733 ENSMMDG00005019738 ENSMMDG00005019740 clcn4 (ENSMMDG00005019786) ENSMMDG00005021501 CLASP1 (ENSMMDG00005021516) ENSMMDG00005021541 INHBB (ENSMMDG00005021550) RALB (ENSMMDG00005021555) faimb (ENSMMDG00005021558) AGAP1 (ENSMMDG00005021582) gbx2 (ENSMMDG00005022206) iqca1 (ENSMMDG00005022207) ACKR3 (ENSMMDG00005022208) ENSMMDG00005022209 #22 ENSMMDG00005022210 #22 ENSMMDG00005022211 #22 trim63a (ENSMMDG00005022212) mlpha (ENSMMDG00005022215) ENSMMDG00005022217 KLHL10 (ENSMMDG00005022219) st6gal2b (ENSMMDG00005022221) ENSMMDG00005022223 nck2b (ENSMMDG00005022226) dph3 (ENSMMDG00005022230) ENSMMDG00005022235 ENSMMDG00005022237 fhl2b (ENSMMDG00005022240) ENSMMDG00005022243 ENSMMDG00005022250 KIF5C (ENSMMDG00005022336) Pinecone sodierfish MODERN SPECIES 11 fzd7a (ENSMMDG00005019732) ENSMMDG00005019733 ENSMMDG00005019738 ENSMMDG00005019740 clcn4 (ENSMMDG00005019786) ENSMMDG00005021501 CLASP1 (ENSMMDG00005021516) ENSMMDG00005021541 INHBB (ENSMMDG00005021550) RALB (ENSMMDG00005021555) faimb (ENSMMDG00005021558) AGAP1 (ENSMMDG00005021582) gbx2 (ENSMMDG00005022206) iqca1 (ENSMMDG00005022207) ACKR3 (ENSMMDG00005022208) ENSMMDG00005022209 #22 ENSMMDG00005022210 #22 ENSMMDG00005022211 #22 trim63a (ENSMMDG00005022212) mlpha (ENSMMDG00005022215) ENSMMDG00005022217 KLHL10 (ENSMMDG00005022219) st6gal2b (ENSMMDG00005022221) ENSMMDG00005022223 nck2b (ENSMMDG00005022226) dph3 (ENSMMDG00005022230) ENSMMDG00005022235 ENSMMDG00005022237 fhl2b (ENSMMDG00005022240) ENSMMDG00005022243 ENSMMDG00005022250 Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 21 homeza (ENSGMOG00000032787) ENSGMOG00000022761 MPLKIP (ENSGMOG00000025037) ENSGMOG00000026769 ENSGMOG00000010219 ENSGMOG00000002171 ENSGMOG00000002258 ENSGMOG00000030662 ENSGMOG00000016250 ENSGMOG00000016230 DARS2 (ENSGMOG00000016195) ENSGMOG00000009614 klhl20 (ENSGMOG00000014816) ENSGMOG00000025786 ENSGMOG00000036435 #22 ENSGMOG00000034479 #22 ENSGMOG00000031059 ENSGMOG00000026164 #22 ENSGMOG00000014685 #22 ENSGMOG00000024838 #22 ENSGMOG00000035511 #22 ENSGMOG00000006337 atpsckmt (ENSGMOG00000006364) marchf6 (ENSGMOG00000006372) ENSGMOG00000006410 ctnnd2b (ENSGMOG00000017054) lyn (ENSGMOG00000004746) ENSGMOG00000004723 zswim5 (ENSGMOG00000004696) ENSGMOG00000004691 toe1 (ENSGMOG00000004656) Cod MODERN SPECIES 21 ENSGMOG00000026769 ENSGMOG00000010219 ENSGMOG00000002171 ENSGMOG00000002258 ENSGMOG00000030662 ENSGMOG00000016250 ENSGMOG00000016230 DARS2 (ENSGMOG00000016195) ENSGMOG00000009614 klhl20 (ENSGMOG00000014816) ENSGMOG00000025786 ENSGMOG00000036435 #22 ENSGMOG00000034479 #22 ENSGMOG00000031059 ENSGMOG00000026164 #22 ENSGMOG00000014685 #22 ENSGMOG00000024838 #22 ENSGMOG00000035511 #22 ENSGMOG00000006337 atpsckmt (ENSGMOG00000006364) marchf6 (ENSGMOG00000006372) ENSGMOG00000006410 ctnnd2b (ENSGMOG00000017054) lyn (ENSGMOG00000004746) ENSGMOG00000004723 zswim5 (ENSGMOG00000004696) ENSGMOG00000004691 toe1 (ENSGMOG00000004656) ENSGMOG00000001802 tmem53 (ENSGMOG00000026994) rnf220a (ENSGMOG00000018091) Cod DUPLICATION Cod DUPLICATION Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 22 grm3 (ENSGMOG00000035584) sema3d (ENSGMOG00000019387) sema3e (ENSGMOG00000019371) CACNA2D1 (ENSGMOG00000019325) HGF (ENSGMOG00000019309) lrrc4.2 (ENSGMOG00000019999) ENSGMOG00000025326 rbm28 (ENSGMOG00000007091) ENSGMOG00000007084 ENSGMOG00000007081 ENSGMOG00000007073 ENSGMOG00000022982 #22 ENSGMOG00000029881 ENSGMOG00000000661 #22 ENSGMOG00000036427 ENSGMOG00000007043 #22 ENSGMOG00000035978 ENSGMOG00000024835 #22 ENSGMOG00000025801 #22 ENSGMOG00000030939 ENSGMOG00000030268 ENSGMOG00000033438 ENSGMOG00000033070 ENSGMOG00000018928 ENSGMOG00000006386 cpa1 (ENSGMOG00000006412) tes (ENSGMOG00000024389) cav2 (ENSGMOG00000011408) cav1 (ENSGMOG00000027424) met (ENSGMOG00000008433) ENSGMOG00000013681 Cod MODERN SPECIES 22 ENSGMOG00000029520 ENSGMOG00000014723 grm3 (ENSGMOG00000035584) sema3d (ENSGMOG00000019387) sema3e (ENSGMOG00000019371) CACNA2D1 (ENSGMOG00000019325) HGF (ENSGMOG00000019309) lrrc4.2 (ENSGMOG00000019999) ENSGMOG00000025326 rbm28 (ENSGMOG00000007091) ENSGMOG00000007084 ENSGMOG00000007081 ENSGMOG00000007073 ENSGMOG00000022982 #22 ENSGMOG00000029881 ENSGMOG00000000661 #22 ENSGMOG00000036427 ENSGMOG00000007043 #22 ENSGMOG00000035978 ENSGMOG00000024835 #22 ENSGMOG00000025801 #22 ENSGMOG00000030939 ENSGMOG00000030268 ENSGMOG00000033438 ENSGMOG00000033070 ENSGMOG00000018928 ENSGMOG00000006386 cpa1 (ENSGMOG00000006412) tes (ENSGMOG00000024389) cav2 (ENSGMOG00000011408) cav1 (ENSGMOG00000027424) Cod MODERN SPECIES 22 CACNA2D1 (ENSGMOG00000019325) HGF (ENSGMOG00000019309) lrrc4.2 (ENSGMOG00000019999) ENSGMOG00000025326 rbm28 (ENSGMOG00000007091) ENSGMOG00000007084 ENSGMOG00000007081 ENSGMOG00000007073 ENSGMOG00000022982 #22 ENSGMOG00000029881 ENSGMOG00000000661 #22 ENSGMOG00000036427 ENSGMOG00000007043 #22 ENSGMOG00000035978 ENSGMOG00000024835 #22 ENSGMOG00000025801 #22 ENSGMOG00000030939 ENSGMOG00000030268 ENSGMOG00000033438 ENSGMOG00000033070 ENSGMOG00000018928 ENSGMOG00000006386 cpa1 (ENSGMOG00000006412) tes (ENSGMOG00000024389) cav2 (ENSGMOG00000011408) cav1 (ENSGMOG00000027424) met (ENSGMOG00000008433) ENSGMOG00000013681 ST7 (ENSGMOG00000014821) wnt2 (ENSGMOG00000030449) ENSGMOG00000028057 Cod DUPLICATION Cod MODERN SPECIES 22 ENSGMOG00000002172 elapor2a (ENSGMOG00000002127) ENSGMOG00000029520 ENSGMOG00000014723 grm3 (ENSGMOG00000035584) sema3d (ENSGMOG00000019387) sema3e (ENSGMOG00000019371) CACNA2D1 (ENSGMOG00000019325) HGF (ENSGMOG00000019309) lrrc4.2 (ENSGMOG00000019999) ENSGMOG00000025326 rbm28 (ENSGMOG00000007091) ENSGMOG00000007084 ENSGMOG00000007081 ENSGMOG00000007073 ENSGMOG00000022982 #22 ENSGMOG00000029881 ENSGMOG00000000661 #22 ENSGMOG00000036427 ENSGMOG00000007043 #22 ENSGMOG00000035978 ENSGMOG00000024835 #22 ENSGMOG00000025801 #22 ENSGMOG00000030939 ENSGMOG00000030268 ENSGMOG00000033438 ENSGMOG00000033070 ENSGMOG00000018928 ENSGMOG00000006386 cpa1 (ENSGMOG00000006412) tes (ENSGMOG00000024389) Cod MODERN SPECIES 22 sema3e (ENSGMOG00000019371) CACNA2D1 (ENSGMOG00000019325) HGF (ENSGMOG00000019309) lrrc4.2 (ENSGMOG00000019999) ENSGMOG00000025326 rbm28 (ENSGMOG00000007091) ENSGMOG00000007084 ENSGMOG00000007081 ENSGMOG00000007073 ENSGMOG00000022982 #22 ENSGMOG00000029881 ENSGMOG00000000661 #22 ENSGMOG00000036427 ENSGMOG00000007043 #22 ENSGMOG00000035978 ENSGMOG00000024835 #22 ENSGMOG00000025801 #22 ENSGMOG00000030939 ENSGMOG00000030268 ENSGMOG00000033438 ENSGMOG00000033070 ENSGMOG00000018928 ENSGMOG00000006386 cpa1 (ENSGMOG00000006412) tes (ENSGMOG00000024389) cav2 (ENSGMOG00000011408) cav1 (ENSGMOG00000027424) met (ENSGMOG00000008433) ENSGMOG00000013681 ST7 (ENSGMOG00000014821) wnt2 (ENSGMOG00000030449) Cod DUPLICATION Cod DUPLICATION Cod DUPLICATION Cod MODERN SPECIES 21 ENSGMOG00000010219 ENSGMOG00000002171 ENSGMOG00000002258 ENSGMOG00000030662 ENSGMOG00000016250 ENSGMOG00000016230 DARS2 (ENSGMOG00000016195) ENSGMOG00000009614 klhl20 (ENSGMOG00000014816) ENSGMOG00000025786 ENSGMOG00000036435 #22 ENSGMOG00000034479 #22 ENSGMOG00000031059 ENSGMOG00000026164 #22 ENSGMOG00000014685 #22 ENSGMOG00000024838 #22 ENSGMOG00000035511 #22 ENSGMOG00000006337 atpsckmt (ENSGMOG00000006364) marchf6 (ENSGMOG00000006372) ENSGMOG00000006410 ctnnd2b (ENSGMOG00000017054) lyn (ENSGMOG00000004746) ENSGMOG00000004723 zswim5 (ENSGMOG00000004696) ENSGMOG00000004691 toe1 (ENSGMOG00000004656) ENSGMOG00000001802 tmem53 (ENSGMOG00000026994) rnf220a (ENSGMOG00000018091) klf17 (ENSGMOG00000025553) Cod MODERN SPECIES 21 ENSGMOG00000004691 zswim5 (ENSGMOG00000004696) ENSGMOG00000004723 lyn (ENSGMOG00000004746) ctnnd2b (ENSGMOG00000017054) ENSGMOG00000006410 marchf6 (ENSGMOG00000006372) atpsckmt (ENSGMOG00000006364) ENSGMOG00000006337 ENSGMOG00000035511 #22 ENSGMOG00000024838 #22 ENSGMOG00000014685 #22 ENSGMOG00000026164 #22 ENSGMOG00000031059 ENSGMOG00000034479 #22 ENSGMOG00000036435 #22 ENSGMOG00000025786 klhl20 (ENSGMOG00000014816) ENSGMOG00000009614 DARS2 (ENSGMOG00000016195) ENSGMOG00000016230 ENSGMOG00000016250 ENSGMOG00000030662 ENSGMOG00000002258 ENSGMOG00000002171 ENSGMOG00000010219 ENSGMOG00000026769 MPLKIP (ENSGMOG00000025037) ENSGMOG00000022761 homeza (ENSGMOG00000032787) dhrs1 (ENSGMOG00000014739) Cod MODERN SPECIES 21 MPLKIP (ENSGMOG00000025037) ENSGMOG00000026769 ENSGMOG00000010219 ENSGMOG00000002171 ENSGMOG00000002258 ENSGMOG00000030662 ENSGMOG00000016250 ENSGMOG00000016230 DARS2 (ENSGMOG00000016195) ENSGMOG00000009614 klhl20 (ENSGMOG00000014816) ENSGMOG00000025786 ENSGMOG00000036435 #22 ENSGMOG00000034479 #22 ENSGMOG00000031059 ENSGMOG00000026164 #22 ENSGMOG00000014685 #22 ENSGMOG00000024838 #22 ENSGMOG00000035511 #22 ENSGMOG00000006337 atpsckmt (ENSGMOG00000006364) marchf6 (ENSGMOG00000006372) ENSGMOG00000006410 ctnnd2b (ENSGMOG00000017054) lyn (ENSGMOG00000004746) ENSGMOG00000004723 zswim5 (ENSGMOG00000004696) ENSGMOG00000004691 toe1 (ENSGMOG00000004656) ENSGMOG00000001802 tmem53 (ENSGMOG00000026994) Cod MODERN SPECIES 21 ENSGMOG00000002171 ENSGMOG00000002258 ENSGMOG00000030662 ENSGMOG00000016250 ENSGMOG00000016230 DARS2 (ENSGMOG00000016195) ENSGMOG00000009614 klhl20 (ENSGMOG00000014816) ENSGMOG00000025786 ENSGMOG00000036435 #22 ENSGMOG00000034479 #22 ENSGMOG00000031059 ENSGMOG00000026164 #22 ENSGMOG00000014685 #22 ENSGMOG00000024838 #22 ENSGMOG00000035511 #22 ENSGMOG00000006337 atpsckmt (ENSGMOG00000006364) marchf6 (ENSGMOG00000006372) ENSGMOG00000006410 ctnnd2b (ENSGMOG00000017054) lyn (ENSGMOG00000004746) ENSGMOG00000004723 zswim5 (ENSGMOG00000004696) ENSGMOG00000004691 toe1 (ENSGMOG00000004656) ENSGMOG00000001802 tmem53 (ENSGMOG00000026994) rnf220a (ENSGMOG00000018091) klf17 (ENSGMOG00000025553) slc6a9 (ENSGMOG00000024181) Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 514 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f.g #22 Salmoninae ANCESTRAL SPECIES 851 ENSGT00950000183007.b.f.g #22 ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 ENSGT00940000165033 ENSGT00970000198392 Huchen MODERN SPECIES 799 ENSHHUG00000040744 #22 ENSHHUG00000040750 FAM81B (ENSHHUG00000040757) MCTP1 (ENSHHUG00000040769) ENSHHUG00000040959 ENSHHUG00000040966 ENSHHUG00000040974 ENSHHUG00000040976 Salmoninae_a ANCESTRAL SPECIES 70 ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01040000240838.a ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j ENSGT00390000000672.a.b.w ENSGT00390000008634.o ENSGT00940000155846.a ENSGT00390000018086.a ENSGT00940000158144.a.a ENSGT00940000166906.e ENSGT00940000156102.q.b.d ENSGT00950000183007.b.f.g #22 ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 58 ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT00940000156959.A.l.a ENSGT01040000240838.a ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j ENSGT00390000000672.a.b.w ENSGT00390000008634.o ENSGT00940000155846.a ENSGT00390000018086.a ENSGT00940000158144.a.a ENSGT00940000166906.e ENSGT00940000156102.q.b.d ENSGT00950000183007.b.f.g.a #22 ENSGT00390000004985.a ENSGT00990000211620 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.h ENSGT00940000157876.f ENSGT00940000157242.a.a.b ENSGT00940000164944.h ENSGT00940000166263.i.a ENSGT00940000153352.A.i ENSGT00940000158491.a.e ENSGT00390000017819.g ENSGT01100000263701 ENSGT00940000158711.f Atlantic salmon MODERN SPECIES 12 ENSSSAG00000007672 SMN1 (ENSSSAG00000007712) ENSSSAG00000007722 ENSSSAG00000007753 ENSSSAG00000098824 ENSSSAG00000088391 ENSSSAG00000008375 nr2f1a (ENSSSAG00000008392) fam172a (ENSSSAG00000008425) KIAA0825 (ENSSSAG00000008450) SLF1 (ENSSSAG00000008460) MCTP1 (ENSSSAG00000008495) ENSSSAG00000009183 fam81b (ENSSSAG00000009202) ENSSSAG00000090195 #22 ENSSSAG00000009251 #22 ENSSSAG00000009292 ENSSSAG00000095308 ENSSSAG00000121084 hapln1a (ENSSSAG00000009509) ENSSSAG00000092916 EDIL3 (ENSSSAG00000009561) ENSSSAG00000115116 RASA1 (ENSSSAG00000009918) ccnh (ENSSSAG00000031250) tmem161b (ENSSSAG00000103342) mef2cb (ENSSSAG00000032249) ENSSSAG00000039404 ENSSSAG00000100298 NOE1 (ENSSSAG00000039458) ENSSSAG00000039962 River trout MODERN SPECIES 39 ENSSTUG00000007103 ENSSTUG00000007088 mef2cb (ENSSTUG00000006634) ENSSTUG00000006612 tmem161b (ENSSTUG00000006267) ccnh (ENSSTUG00000006226) RASA1 (ENSSTUG00000005102) cox7c (ENSSTUG00000005033) ENSSTUG00000005027 ENSSTUG00000005009 EDIL3 (ENSSTUG00000004155) ENSSTUG00000004108 hapln1a (ENSSTUG00000004092) ENSSTUG00000004076 ENSSTUG00000004059 irgf1 (ENSSTUG00000004015) #22 ENSSTUG00000004003 FAM81B (ENSSTUG00000003976) ENSSTUG00000003958 MCTP1 (ENSSTUG00000002819) SLF1 (ENSSTUG00000002746) KIAA0825 (ENSSTUG00000002603) fam172a (ENSSTUG00000017498) nr2f1a (ENSSTUG00000017416) aqp3a (ENSSTUG00000017375) ENSSTUG00000017358 rhobtb4 (ENSSTUG00000017233) ENSSTUG00000017197 ENSSTUG00000017180 smn1 (ENSSTUG00000017152) rtkna (ENSSTUG00000017093) Salmo ANCESTRAL SPECIES ENSGT00950000183007.b.f.g.b #22 Atlantic salmon MODERN SPECIES 12 NOE1 (ENSSSAG00000039458) ENSSSAG00000100298 ENSSSAG00000039404 mef2cb (ENSSSAG00000032249) tmem161b (ENSSSAG00000103342) ccnh (ENSSSAG00000031250) RASA1 (ENSSSAG00000009918) ENSSSAG00000115116 EDIL3 (ENSSSAG00000009561) ENSSSAG00000092916 hapln1a (ENSSSAG00000009509) ENSSSAG00000121084 ENSSSAG00000095308 ENSSSAG00000009292 ENSSSAG00000009251 #22 ENSSSAG00000090195 #22 fam81b (ENSSSAG00000009202) ENSSSAG00000009183 MCTP1 (ENSSSAG00000008495) SLF1 (ENSSSAG00000008460) KIAA0825 (ENSSSAG00000008450) fam172a (ENSSSAG00000008425) nr2f1a (ENSSSAG00000008392) ENSSSAG00000008375 ENSSSAG00000088391 ENSSSAG00000098824 ENSSSAG00000007753 ENSSSAG00000007722 SMN1 (ENSSSAG00000007712) ENSSSAG00000007672 mblac2 (ENSSSAG00000007660) Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01100000265546 ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j ENSGT00390000000672.a.b.w ENSGT00390000008634.o ENSGT00940000155846.a ENSGT00390000018086.a ENSGT00940000158144.a.a ENSGT00940000166906.e ENSGT00940000156102.q.b.d ENSGT00950000183007.b.f.g #22 ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00660000097118 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Oncorhynchus_a ANCESTRAL SPECIES 15 ENSGT00940000155853.d.b.d ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01100000265546 ENSGT00940000157492.b.j ENSGT00390000000672.a.b.w ENSGT00390000008634.o ENSGT00940000155846.a ENSGT00390000018086.a ENSGT00940000158144.a.a ENSGT00940000166906.e ENSGT00940000156102.q.b.d ENSGT00950000183007.b.f.g #22 ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00660000097118 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Chinook salmon MODERN SPECIES 3 ENSOTSG00005047129 phf19 (ENSOTSG00005047133) FIBCD1 (ENSOTSG00005047136) fnbp1a (ENSOTSG00005047142) ENSOTSG00005047163 olfm1a (ENSOTSG00005047164) ENSOTSG00005033015 mef2cb (ENSOTSG00005033029) tmem161b (ENSOTSG00005035253) ccnh (ENSOTSG00005035254) RASA1 (ENSOTSG00005035259) cox7c (ENSOTSG00005035400) EDIL3 (ENSOTSG00005035431) hapln1a (ENSOTSG00005036651) ENSOTSG00005036652 ENSOTSG00005036654 #22 ENSOTSG00005036656 FAM81B (ENSOTSG00005036657) zgc:194908 (ENSOTSG00005036659) SLF1 (ENSOTSG00005036661) KIAA0825 (ENSOTSG00005036662) ENSOTSG00005036663 fam172a (ENSOTSG00005036666) nr2f1a (ENSOTSG00005036667) aqp3a (ENSOTSG00005036697) ENSOTSG00005036698 rhobtb4 (ENSOTSG00005036699) ENSOTSG00005037153 smn1 (ENSOTSG00005037154) rtkna (ENSOTSG00005037155) ENSOTSG00005038538 Coho salmon MODERN SPECIES 28 fnbp1a (ENSOKIG00005049465) ENSOKIG00005049596 olfm1a (ENSOKIG00005031027) ENSOKIG00005031113 ENSOKIG00005031135 mef2cb (ENSOKIG00005031185) tmem161b (ENSOKIG00005031517) ccnh (ENSOKIG00005031684) RASA1 (ENSOKIG00005031754) cox7c (ENSOKIG00005031987) EDIL3 (ENSOKIG00005032037) ENSOKIG00005032330 hapln1a (ENSOKIG00005032336) ENSOKIG00005032357 ENSOKIG00005032475 IRGC (ENSOKIG00005032485) #22 ENSOKIG00005032500 FAM81B (ENSOKIG00005032506) MCTP1 (ENSOKIG00005032549) ENSOKIG00005033055 SLF1 (ENSOKIG00005033059) KIAA0825 (ENSOKIG00005033067) fam172a (ENSOKIG00005033090) nr2f1a (ENSOKIG00005033128) AQP3 (ENSOKIG00005033228) ENSOKIG00005033257 ENSOKIG00005033320 ENSOKIG00005033360 ENSOKIG00005033384 RTKN (ENSOKIG00005033468) mblac2 (ENSOKIG00005033753) Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 2 ENSOMYG00000009617 ENSOMYG00000073008 ENSOMYG00000055540 ENSOMYG00000009586 mef2cb (ENSOMYG00000009387) tmem161b (ENSOMYG00000009002) ccnh (ENSOMYG00000008859) RASA1 (ENSOMYG00000008497) ENSOMYG00000017501 COX7C (ENSOMYG00000007745) EDIL3 (ENSOMYG00000007683) ENSOMYG00000007455 ENSOMYG00000007399 ENSOMYG00000071820 ENSOMYG00000063779 #22 ENSOMYG00000007122 #22 ENSOMYG00000007054 ENSOMYG00000072659 FAM81B (ENSOMYG00000007040) ENSOMYG00000067786 ENSOMYG00000049638 MCTP1 (ENSOMYG00000006980) SLF1 (ENSOMYG00000006870) ENSOMYG00000048823 KIAA0825 (ENSOMYG00000006716) fam172a (ENSOMYG00000006567) nr2f1a (ENSOMYG00000006373) ENSOMYG00000062845 ENSOMYG00000006281 ENSOMYG00000006260 ENSOMYG00000006074 Rainbow trout MODERN SPECIES 2 ENSOMYG00000009660 ENSOMYG00000009617 ENSOMYG00000073008 ENSOMYG00000055540 ENSOMYG00000009586 mef2cb (ENSOMYG00000009387) tmem161b (ENSOMYG00000009002) ccnh (ENSOMYG00000008859) RASA1 (ENSOMYG00000008497) ENSOMYG00000017501 COX7C (ENSOMYG00000007745) EDIL3 (ENSOMYG00000007683) ENSOMYG00000007455 ENSOMYG00000007399 ENSOMYG00000071820 ENSOMYG00000063779 #22 ENSOMYG00000007122 #22 ENSOMYG00000007054 ENSOMYG00000072659 FAM81B (ENSOMYG00000007040) ENSOMYG00000067786 ENSOMYG00000049638 MCTP1 (ENSOMYG00000006980) SLF1 (ENSOMYG00000006870) ENSOMYG00000048823 KIAA0825 (ENSOMYG00000006716) fam172a (ENSOMYG00000006567) nr2f1a (ENSOMYG00000006373) ENSOMYG00000062845 ENSOMYG00000006281 ENSOMYG00000006260 Northern pike MODERN SPECIES 15 ENSELUG00000030152 ENSELUG00000004187 rab20 (ENSELUG00000004092) naxd (ENSELUG00000004084) ing1 (ENSELUG00000029885) ankrd10b (ENSELUG00000004002) ENSELUG00000031442 ENSELUG00000003940 ADAMTS16 (ENSELUG00000003956) irx1a (ENSELUG00000003928) ENSELUG00000026048 ENSELUG00000031605 irx2a (ENSELUG00000003905) ENSELUG00000003885 IRGC (ENSELUG00000031960) ##22 irgf1 (ENSELUG00000003864) #22 mc2r (ENSELUG00000003832) mc5rb (ENSELUG00000003825) fam210ab (ENSELUG00000003811) ldlrad4b (ENSELUG00000003793) CEP192 (ENSELUG00000003767) SEH1L (ENSELUG00000003728) ptpn2a (ENSELUG00000003708) cep76 (ENSELUG00000003693) id4 (ENSELUG00000032505) ncalda (ENSELUG00000003663) grhl2a (ENSELUG00000003646) ENSELUG00000003632 pabpc1a (ENSELUG00000003614) ENSELUG00000003588 ENSELUG00000003573 Protacanthopterygii ANCESTRAL SPECIES 1 ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01100000263535.b.a.a.a.a.c.a.c.b ENSGT01030000234968 ENSGT01100000263535.b.a.a.a.a.c.a.c.a ENSGT01100000263586 ENSGT00940000163304 ENSGT00950000183007.b.f.h #22 ENSGT00390000003568 ENSGT00940000164700.B.b ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00940000170150 ENSGT00390000010337.A ENSGT01050000244883.A.a.b ENSGT01020000230438.A ENSGT00940000162367.f ENSGT01100000263533.b.b.b.a.a.b ENSGT00940000166024 ENSGT00940000161979.B.o ENSGT00940000181435 ENSGT00940000162287.C ENSGT00940000164700.A Salmoninae ANCESTRAL SPECIES 1402 ENSGT01100000263586 ENSGT00940000163304.jb.a ENSGT00950000183007.b.f.h #22 Salmoninae_a ANCESTRAL SPECIES 220 ENSGT01100000263586 ENSGT00940000163304.jb.a ENSGT00950000183007.b.f.h #22 ENSGT00390000003568.d ENSGT00940000164700.B.b.a ENSGT00950000182904.a.a.b.d.b ENSGT00950000182952.E.e ENSGT00390000010337.A.n Oncorhynchus ANCESTRAL SPECIES 53 ENSGT00530000063252.b.b ENSGT00940000154616.b.ab ENSGT00390000005702.c.a ENSGT00940000163756.c.b.c.a ENSGT00390000005702.c.b ENSGT00940000163756.c.b.c.b ENSGT00390000016319.j ENSGT01000000221276 ENSGT00390000002748.a.a ENSGT01020000230438.D.r ENSGT00940000154494.a.n ENSGT01100000263535.b.a.a.a.a.c.a.c.b ENSGT01030000234968 ENSGT01100000263535.b.a.a.a.a.c.a.c.a.a.b ENSGT00940000163304.jb.a ENSGT00950000183007.b.f.h #22 ENSGT00390000003568.d ENSGT00940000164700.B.b.a ENSGT00950000182904.a.a.b.c ENSGT00970000198324 ENSGT00950000182904.a.a.b.d.a ENSGT00950000182952.E.f ENSGT00940000170150 ENSGT00390000010337.A.m ENSGT01050000244883.A.a.b ENSGT01020000230438.A.g ENSGT00940000162367.f.gc.a ENSGT01060000250942 ENSGT01050000244883.A.a.a.b.g.b ENSGT01050000244883.A.a.a.b.h.b ENSGT00990000203884 Oncorhynchus_a ANCESTRAL SPECIES 130 ENSGT00390000005702.c.b ENSGT00940000163756.c.b.c.a ENSGT00390000016319.j ENSGT01000000221276 ENSGT00390000002748.a.a ENSGT01020000230438.D.r ENSGT00940000154494.a.n ENSGT01100000263535.b.a.a.a.a.c.a.c.b.c ENSGT01030000234968 ENSGT01100000263535.b.a.a.a.a.c.a.c.a.a.b ENSGT00940000163304.jb.a ENSGT00950000183007.b.f.h #22 ENSGT00390000003568.d ENSGT00940000164700.B.b.a ENSGT00950000182904.a.a.b.c ENSGT00970000198324 ENSGT00950000182904.a.a.b.d.a ENSGT00950000182952.E.f ENSGT00940000170150 ENSGT00390000010337.A.m ENSGT01050000244883.A.a.b ENSGT01020000230438.A.g ENSGT00940000162367.f.gc.b.b ENSGT00940000181435.b.b ENSGT00940000162287.C.f ENSGT00940000164700.A.m.d ENSGT01050000244883.A.a.a.b.g.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 3 ENSOTSG00005030849 ENSOTSG00005030844 ENSOTSG00005030843 ENSOTSG00005030842 ENSOTSG00005030841 psenen (ENSOTSG00005030839) ENSOTSG00005030837 lin37 (ENSOTSG00005030836) ENSOTSG00005030835 ctrl (ENSOTSG00005030067) ENSOTSG00005030061 ENSOTSG00005030060 ENSOTSG00005030058 ENSOTSG00005030057 ENSOTSG00005030056 ENSOTSG00005030055 #22 SMG9 (ENSOTSG00005030054) ENSOTSG00005030053 KCNN4 (ENSOTSG00005030052) ENSOTSG00005030051 ENSOTSG00005030049 has1 (ENSOTSG00005030017) ENSOTSG00005029894 ENSOTSG00005029893 ENSOTSG00005029891 ENSOTSG00005029890 ENSOTSG00005029889 ENSOTSG00005029888 ENSOTSG00005029887 prss1 (ENSOTSG00005029886) ENSOTSG00005029885 Chinook salmon MODERN SPECIES 22 kirrel3l (ENSOTSG00005027155) ENSOTSG00005026636 ENSOTSG00005026631 ENSOTSG00005026630 ENSOTSG00005026629 ENSOTSG00005026628 psenen (ENSOTSG00005026625) lin37 (ENSOTSG00005026619) ENSOTSG00005026618 ctrl (ENSOTSG00005026152) ENSOTSG00005026151 ENSOTSG00005026150 ENSOTSG00005026149 ENSOTSG00005026148 ENSOTSG00005026147 ENSOTSG00005026145 #22 SMG9 (ENSOTSG00005026142) ENSOTSG00005026139 KCNN4 (ENSOTSG00005026138) ENSOTSG00005026137 ENSOTSG00005026135 has1 (ENSOTSG00005026081) ENSOTSG00005025941 ENSOTSG00005025935 ENSOTSG00005025934 ENSOTSG00005025933 ENSOTSG00005025932 ENSOTSG00005025931 prss1 (ENSOTSG00005025930) ENSOTSG00005025929 ENSOTSG00005025928 Huchen MODERN SPECIES 1833 ENSHHUG00000022262 ENSHHUG00000022224 #22 ENSHHUG00000022218 SMG9 (ENSHHUG00000022200) ENSHHUG00000022196 ENSHHUG00000022187 ENSHHUG00000022184 ENSHHUG00000022178 ENSHHUG00000022168 has1 (ENSHHUG00000022129) ENSHHUG00000022108 ENSHHUG00000022103 ENSHHUG00000022099 ENSHHUG00000022095 ENSHHUG00000022094 ENSHHUG00000022093 ENSHHUG00000022092 Otomorpha ANCESTRAL SPECIES 859 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 Otophysi ANCESTRAL SPECIES 667 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 Cyprinoidei DUPLICATION Cyprinoidei DUPLICATION Cyprinoidei DUPLICATION Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.i.a.a.a #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 986 ENSGT00940000159347.g ENSGT01090000260030.a.b.a.b.a.a.a.a.a.a ENSGT01090000260030.a.b.a.a.b.b.a.a.a.a.a.a.a ENSGT00950000183007.b.f.i.a.a.a.a #22 ENSGT01090000260030.a.b.a.a.b.b.a.a.a.b Goldfish MODERN SPECIES 19 MYLK4 (ENSCARG00000017517) foxc1a (ENSCARG00000017581) foxf2a (ENSCARG00000017592) foxq1a (ENSCARG00000017604) irf4a (ENSCARG00000017617) ripk1l (ENSCARG00000017636) ENSCARG00000017647 ENSCARG00000017660 ENSCARG00000017664 ENSCARG00000017670 ENSCARG00000017678 ENSCARG00000017693 ENSCARG00000017702 ENSCARG00000017705 ENSCARG00000017712 ENSCARG00000017719 #22 MOV10L1 (ENSCARG00000017732) ENSCARG00000017780 ENSCARG00000017798 ENSCARG00000017800 ENSCARG00000017804 ENSCARG00000017808 ENSCARG00000017815 ENSCARG00000017827 adcy1b (ENSCARG00000017842) igfbp1b (ENSCARG00000018003) angptl1b (ENSCARG00000018017) ENSCARG00000018027 ENSCARG00000018035 ENSCARG00000018042 ENSCARG00000018061 Cyprininae_a ANCESTRAL SPECIES 98 ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.b.b.b.a.a.a.a.a.a.a.a.a.a.a.b.a ENSGT00940000155295.z ENSGT00940000155604 ENSGT00390000004912.g.a ENSGT00940000155601.h.d ENSGT00940000155638.wb.a.d ENSGT00390000008538 ENSGT00940000156211.a.b.b ENSGT00940000162937.a.b.d ENSGT00940000159059.p ENSGT00940000159347.g ENSGT01090000260030.a.b.a.b.a.a.a.a.a.a ENSGT00940000155265.b.a ENSGT01090000260030.a.b.a.a.b.b.a.a.a.a.a.b ENSGT01090000260030.a.b.a.a.b.b.a.a.a.a.a.a.a ENSGT00950000183007.b.f.i.a.a.a.a #22 ENSGT00940000154308.B.d.b.a.a ENSGT00940000160150 ENSGT01090000260030.a.b.a.a.b.b.a.a.a.b Common carp reference MODERN SPECIES 29 ZNF521 (ENSCCRG00000053000) ENSCCRG00000032417 ENSCCRG00000077956 OSBPL1A (ENSCCRG00000055923) ENSCCRG00000031379 polr2d (ENSCCRG00000031380) ENSCCRG00000081672 ENSCCRG00000055458 wrnip1 (ENSCCRG00000058569) MYLK4 (ENSCCRG00000069582) ENSCCRG00000056833 foxc1a (ENSCCRG00000065915) foxf2a (ENSCCRG00000063399) foxq1a (ENSCCRG00000056458) irf4a (ENSCCRG00000074644) ENSCCRG00000007137 #22 ripk1l (ENSCCRG00000028862) ENSCCRG00000082585 ENSCCRG00000048592 ENSCCRG00000028866 ENSCCRG00000028868 ENSCCRG00000078075 ENSCCRG00000076309 ENSCCRG00000071560 ENSCCRG00000075924 ENSCCRG00000001626 ENSCCRG00000000388 ENSCCRG00000059485 ENSCCRG00000079484 ENSCCRG00000080850 ENSCCRG00000057980 Golden-line barbel MODERN SPECIES 224 map2k1 (ENSSGRG00000053371) rpl4 (ENSSGRG00000053329) zwilch (ENSSGRG00000053327) LCTL (ENSSGRG00000053324) snapc5 (ENSSGRG00000053323) smad6b (ENSSGRG00000053322) ENSSGRG00000053321 aagab (ENSSGRG00000053318) iqch (ENSSGRG00000053315) zgc:162898 (ENSSGRG00000053314) ENSSGRG00000053214 ENSSGRG00000053206 morf4l1 (ENSSGRG00000053205) ENSSGRG00000053204 tle3a (ENSSGRG00000051652) ENSSGRG00000051635 #22 kif23 (ENSSGRG00000051628) ddb2 (ENSSGRG00000051625) kbtbd4 (ENSSGRG00000051617) rapsn (ENSSGRG00000051616) ENSSGRG00000051614 agk (ENSSGRG00000051590) dennd11 (ENSSGRG00000051588) wee2 (ENSSGRG00000051565) bida (ENSSGRG00000051564) bcl2l13 (ENSSGRG00000051563) wnt2 (ENSSGRG00000051561) asz1 (ENSSGRG00000051560) cftr (ENSSGRG00000051555) ENSSGRG00000051552 ENSSGRG00000051549 Cyprininae ANCESTRAL SPECIES 66 ENSGT00390000004912.g.a ENSGT00940000155601.h.d ENSGT00940000155638.wb.a.d ENSGT00390000008538 ENSGT00940000156211.a.b.b ENSGT00940000162303.a.b.b ENSGT00940000163866.a.a ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347.h ENSGT00940000164582.b ENSGT00940000158279 ENSGT01050000244806.b.a.b.c.a.a.a.b.a.b ENSGT00940000154308.B.c.b.a.b ENSGT00950000183007.b.f.i.a.a.a.b #22 ENSGT01090000260030.a.b.a.b.a.a.b.a ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT01020000230359.A.z ENSGT00940000155842.t.w.b.a.a ENSGT00940000156080.k ENSGT00940000154872.A.a ENSGT00940000157394.b.a ENSGT00940000155091.eb.b.a.a Goldfish MODERN SPECIES 11 CACNA1E (ENSCARG00000009491) ENSCARG00000009410 MYLK4 (ENSCARG00000009386) foxc1a (ENSCARG00000009372) ENSCARG00000009368 foxf2a (ENSCARG00000009359) foxq1a (ENSCARG00000009354) irf4a (ENSCARG00000009346) dusp22b (ENSCARG00000009338) ripk1l (ENSCARG00000009317) ENSCARG00000009309 ENSCARG00000009304 DHX30 (ENSCARG00000009105) zgc:113293 (ENSCARG00000009093) ENSCARG00000009089 ENSCARG00000009088 #22 ENSCARG00000009084 ENSCARG00000009081 ENSCARG00000009078 MEP1B (ENSCARG00000009065) PHLPP1 (ENSCARG00000009016) ENSCARG00000009002 ENSCARG00000008973 SIRT5 (ENSCARG00000008958) ENSCARG00000008945 adcy1b (ENSCARG00000008299) igfbp1b (ENSCARG00000008249) angptl1b (ENSCARG00000008241) zgc:153913 (ENSCARG00000008235) ENSCARG00000008232 TNS3 (ENSCARG00000007655) Cyprininae_a ANCESTRAL SPECIES 259 ENSGT00940000163206.b.a.b.b ENSGT00390000004912.h ENSGT00940000155601.h.c ENSGT00940000155638.wb.a.c ENSGT00940000156211.a.b.a ENSGT00940000162303.a.b.b ENSGT00940000163866.a.a ENSGT00940000162937.a.b.c ENSGT00940000159059.o ENSGT00940000157153.w ENSGT00940000159347.h ENSGT00940000164582.b ENSGT00940000158279 ENSGT01050000244806.b.a.b.c.a.a.a.b.a.b ENSGT00940000154308.B.c.b.a.b ENSGT00950000183007.b.f.i.a.a.a.b #22 ENSGT01090000260030.a.b.a.b.a.a.b.a ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT01020000230359.A.z ENSGT00940000155842.t.w.b.a.a ENSGT00990000209355 ENSGT00940000155842.t.w.b.b ENSGT00940000156080.k ENSGT00940000154872.A.a ENSGT00940000157394.b.a ENSGT00940000155091.eb.b.a.a Common carp reference DUPLICATION Common carp reference DUPLICATION Common carp reference MODERN SPECIES 21 ENSCCRG00000069215 ENSCCRG00000080387 ENSCCRG00000068936 ENSCCRG00000072419 foxf2a (ENSCCRG00000077342) irf4a (ENSCCRG00000005329) ripk1l (ENSCCRG00000028809) ENSCCRG00000028818 ENSCCRG00000058547 ENSCCRG00000063360 ENSCCRG00000072708 ENSCCRG00000082217 ENSCCRG00000076151 zgc:113293 (ENSCCRG00000027665) ENSCCRG00000069797 ENSCCRG00000061306 #22 ENSCCRG00000052705 #22 ENSCCRG00000058739 ENSCCRG00000027720 #22 ENSCCRG00000057040 ENSCCRG00000060209 ENSCCRG00000007485 ENSCCRG00000007489 ENSCCRG00000072258 ENSCCRG00000055066 ENSCCRG00000053755 ENSCCRG00000066771 ENSCCRG00000026288 ENSCCRG00000065597 ENSCCRG00000032877 ENSCCRG00000079157 Common carp reference MODERN SPECIES 21 ENSCCRG00000080387 ENSCCRG00000068936 ENSCCRG00000072419 foxf2a (ENSCCRG00000077342) irf4a (ENSCCRG00000005329) ripk1l (ENSCCRG00000028809) ENSCCRG00000028818 ENSCCRG00000058547 ENSCCRG00000063360 ENSCCRG00000072708 ENSCCRG00000082217 ENSCCRG00000076151 zgc:113293 (ENSCCRG00000027665) ENSCCRG00000069797 ENSCCRG00000061306 #22 ENSCCRG00000052705 #22 ENSCCRG00000058739 ENSCCRG00000027720 #22 ENSCCRG00000057040 ENSCCRG00000060209 ENSCCRG00000007485 ENSCCRG00000007489 ENSCCRG00000072258 ENSCCRG00000055066 ENSCCRG00000053755 ENSCCRG00000066771 ENSCCRG00000026288 ENSCCRG00000065597 ENSCCRG00000032877 ENSCCRG00000079157 ENSCCRG00000053989 Common carp reference MODERN SPECIES 21 ENSCCRG00000072419 foxf2a (ENSCCRG00000077342) irf4a (ENSCCRG00000005329) ripk1l (ENSCCRG00000028809) ENSCCRG00000028818 ENSCCRG00000058547 ENSCCRG00000063360 ENSCCRG00000072708 ENSCCRG00000082217 ENSCCRG00000076151 zgc:113293 (ENSCCRG00000027665) ENSCCRG00000069797 ENSCCRG00000061306 #22 ENSCCRG00000052705 #22 ENSCCRG00000058739 ENSCCRG00000027720 #22 ENSCCRG00000057040 ENSCCRG00000060209 ENSCCRG00000007485 ENSCCRG00000007489 ENSCCRG00000072258 ENSCCRG00000055066 ENSCCRG00000053755 ENSCCRG00000066771 ENSCCRG00000026288 ENSCCRG00000065597 ENSCCRG00000032877 ENSCCRG00000079157 ENSCCRG00000053989 ENSCCRG00000076210 angptl1b (ENSCCRG00000082526) Golden-line barbel MODERN SPECIES 855 foxc1a (ENSSGRG00000027277) ENSSGRG00000027278 foxf2a (ENSSGRG00000027279) foxq1a (ENSSGRG00000027281) irf4a (ENSSGRG00000027282) dusp22b (ENSSGRG00000027283) ripk1l (ENSSGRG00000027287) ENSSGRG00000027293 ENSSGRG00000027294 ENSSGRG00000027296 ENSSGRG00000027297 DHX30 (ENSSGRG00000027305) ENSSGRG00000027329 ENSSGRG00000027330 #22 MEP1B (ENSSGRG00000027331) PHLPP1 (ENSSGRG00000027332) ENSSGRG00000027333 ENSSGRG00000027334 ENSSGRG00000027335 adcy1b (ENSSGRG00000027339) igfbp1b (ENSSGRG00000027349) angptl1b (ENSSGRG00000027352) zgc:153913 (ENSSGRG00000027354) ENSSGRG00000027355 TADA1 (ENSSGRG00000027357) fggy (ENSSGRG00000027385) ENSSGRG00000027391 ENSSGRG00000027778 ENSSGRG00000027780 Zebrafish MODERN SPECIES 10 ENSDARG00000062502 slc52a2 (ENSDARG00000102035) ENSDARG00000070800 fbxl6 (ENSDARG00000077227) eppk1 (ENSDARG00000096359) pleca (ENSDARG00000062590) eif3eb (ENSDARG00000002549) trhrb (ENSDARG00000036159) nudcd1 (ENSDARG00000036158) pkhd1l1.1 (ENSDARG00000091116) pkhd1l1.2 (ENSDARG00000040004) gdf6b (ENSDARG00000005510) grb10a (ENSDARG00000002013) irgf1 (ENSDARG00000070774) #22 ENSDARG00000094710 ENSDARG00000092249 #22 ENSDARG00000111332 ENSDARG00000116558 ENSDARG00000115374 ENSDARG00000116021 ENSDARG00000114586 ENSDARG00000114964 ENSDARG00000115706 ENSDARG00000110131 ENSDARG00000116970 ENSDARG00000093154 ENSDARG00000113206 ENSDARG00000115724 ENSDARG00000115670 ENSDARG00000115246 ENSDARG00000114139 Cyprinoidei ANCESTRAL SPECIES 33 ENSGT00940000157616.j.a ENSGT00390000003774.a.a.c ENSGT00390000003774.b ENSGT00400000024940 ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b ENSGT00390000002661.b.ub.a ENSGT00530000063880.b.e ENSGT01100000263484.B.b.b.a.a ENSGT00390000007776 ENSGT00940000157594 ENSGT00940000160140.a.a ENSGT01090000260033.a.a.b.b.b ENSGT01090000260033.a.a.b.b.a ENSGT00940000155909.o.b ENSGT00950000183007.b.f.i.a.a.b #22 ENSGT00390000005125 ENSGT00940000160977.f ENSGT00940000164926 ENSGT00940000158341.a ENSGT01030000234542.b.a.a.a.a ENSGT00940000154371.a.b.b ENSGT01030000234606.a.b.o ENSGT00990000209965 ENSGT00390000006215.b ENSGT00940000171101 ENSGT00530000064050.a ENSGT00940000162287.D ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b ENSGT00390000003308.a.b Cyprininae ANCESTRAL SPECIES 115 ENSGT00400000024940.b ENSGT00400000022514.d.a ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b.a ENSGT00390000002661.b.ub.a ENSGT00530000063880.b.e.a.b ENSGT01100000263484.B.b.b.a.a.a ENSGT00390000007776.r ENSGT00940000157594.e ENSGT00940000160140.a.a.b ENSGT01100000263549.j.b.a.a ENSGT01030000234589.g.b.b.d ENSGT01100000263549.j.b.b ENSGT01090000260033.a.a.b.a.f.b ENSGT00940000155909.o.b.a ENSGT00950000183007.b.f.i.a.a.b #22 ENSGT00390000005125.s ENSGT00940000164926.i ENSGT00940000158341.a.g ENSGT01030000234542.b.a.a.a.a.i ENSGT00940000154371.a.b.b.a ENSGT00990000209965.b ENSGT00940000171101.b ENSGT00530000064050.a.b ENSGT00940000162287.D.g.a ENSGT00950000182929.B.b.a.f ENSGT00950000182929.B.a.b ENSGT00390000003308.a.b.a ENSGT00940000165835.b.a ENSGT00730000111056.h.b ENSGT00940000158616.n.a Cyprininae_a ANCESTRAL SPECIES 52 ENSGT00390000002661.a.a ENSGT00530000063880.b.e.a.b ENSGT01100000263484.B.b.b.a.a.a ENSGT00390000007776.r ENSGT00940000157594.e ENSGT00940000160140.a.a.b ENSGT01100000263549.j.b.a.a ENSGT01030000234589.g.b.b.d.b.a ENSGT01100000263549.j.b.b ENSGT01030000234589.g.b.b.d.a ENSGT01090000260033.a.a.b.a.f.a ENSGT01030000234589.g.b.b.d.b.b ENSGT01090000260033.a.a.b.a.f.b ENSGT01090000260033.a.a.b.b.a.d.a.a ENSGT00940000155909.o.b.a ENSGT00950000183007.b.f.i.a.a.b #22 ENSGT00940000160977.f.d ENSGT00940000164926.i ENSGT00940000158341.a.g ENSGT01030000234542.b.a.a.a.a.i ENSGT00940000154371.a.b.b.a ENSGT00990000209965.b ENSGT00940000171101.b ENSGT00530000064050.a.b ENSGT00940000162287.D.g.a ENSGT00950000182929.B.b.a.f ENSGT00950000182929.B.a.b ENSGT00390000003308.a.b.a ENSGT00940000165835.b.a ENSGT00730000111056.h.b ENSGT00940000158616.n.a Common carp reference MODERN SPECIES 12 ENSCCRG00000055239 ENSCCRG00000016020 ENSCCRG00000066732 ENSCCRG00000056175 ENSCCRG00000077204 ENSCCRG00000078947 ENSCCRG00000069392 ENSCCRG00000074384 ENSCCRG00000060648 ENSCCRG00000065398 ENSCCRG00000064908 ENSCCRG00000073836 ENSCCRG00000065567 ENSCCRG00000067865 grb10a (ENSCCRG00000025521) irgf1 (ENSCCRG00000003669) #22 ENSCCRG00000003648 ENSCCRG00000081187 arhgef1a (ENSCCRG00000003792) tpm3 (ENSCCRG00000062024) ENSCCRG00000005102 ENSCCRG00000005106 ENSCCRG00000076576 pip5k1aa (ENSCCRG00000017213) ENSCCRG00000017217 ENSCCRG00000065225 apoea (ENSCCRG00000017226) apoa4a (ENSCCRG00000017227) tomm40l (ENSCCRG00000017231) ENSCCRG00000073509 lipea (ENSCCRG00000017249) Goldfish MODERN SPECIES 10 trhrb (ENSCARG00000024988) nudcd1 (ENSCARG00000024995) pkhd1l1.2 (ENSCARG00000025086) gdf6b (ENSCARG00000025878) ENSCARG00000025890 ENSCARG00000025894 ENSCARG00000025899 ENSCARG00000025907 ENSCARG00000025910 ENSCARG00000025918 ENSCARG00000025923 ENSCARG00000025928 ENSCARG00000025932 ENSCARG00000025938 grb10a (ENSCARG00000026077) irgf1 (ENSCARG00000029272) #22 ssr2 (ENSCARG00000029276) ENSCARG00000029292 ENSCARG00000029296 arhgef1a (ENSCARG00000029322) tpm3 (ENSCARG00000029520) ENSCARG00000030338 ENSCARG00000030344 ENSCARG00000030354 pip5k1aa (ENSCARG00000030362) ENSCARG00000030386 ENSCARG00000030468 apoea (ENSCARG00000030475) apoa4a (ENSCARG00000030492) tomm40l (ENSCARG00000030512) ENSCARG00000030591 Zebrafish MODERN SPECIES 10 atp9b (ENSDARG00000062521) nfatc1 (ENSDARG00000036168) ENSDARG00000062502 slc52a2 (ENSDARG00000102035) ENSDARG00000070800 fbxl6 (ENSDARG00000077227) eppk1 (ENSDARG00000096359) pleca (ENSDARG00000062590) eif3eb (ENSDARG00000002549) trhrb (ENSDARG00000036159) nudcd1 (ENSDARG00000036158) pkhd1l1.1 (ENSDARG00000091116) pkhd1l1.2 (ENSDARG00000040004) gdf6b (ENSDARG00000005510) grb10a (ENSDARG00000002013) irgf1 (ENSDARG00000070774) #22 ENSDARG00000094710 ENSDARG00000092249 #22 ENSDARG00000111332 ENSDARG00000116558 ENSDARG00000115374 ENSDARG00000116021 ENSDARG00000114586 ENSDARG00000114964 ENSDARG00000115706 ENSDARG00000110131 ENSDARG00000116970 ENSDARG00000093154 ENSDARG00000113206 ENSDARG00000115724 ENSDARG00000115670 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.i.a.b #22 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 10 PSMD4 (ENSDARG00000104952) ENSDARG00000101029 psmd4a (ENSDARG00000101295) pip5k1aa (ENSDARG00000100396) ENSDARG00000100535 ENSDARG00000103322 ENSDARG00000101721 ENSDARG00000074930 tpm3 (ENSDARG00000005162) arhgef1a (ENSDARG00000040380) ENSDARG00000095458 ENSDARG00000034210 ENSDARG00000089983 ssr2 (ENSDARG00000005230) ENSDARG00000062820 #22 ENSDARG00000062828 #22 ENSDARG00000101686 eepd1 (ENSDARG00000071116) septin7a (ENSDARG00000087647) hsbp1l1 (ENSDARG00000075984) SLC66A2 (ENSDARG00000112922) KCNG2 (ENSDARG00000035961) ctdp1 (ENSDARG00000017522) adck5 (ENSDARG00000075405) cpsf1 (ENSDARG00000034178) ENSDARG00000087145 polr2k (ENSDARG00000075616) spag1a (ENSDARG00000004017) rnf19a (ENSDARG00000012040) pabpc1b (ENSDARG00000021140) ywhaz (ENSDARG00000032575) Zebrafish MODERN SPECIES 10 pabpc1b (ENSDARG00000021140) rnf19a (ENSDARG00000012040) spag1a (ENSDARG00000004017) polr2k (ENSDARG00000075616) ENSDARG00000087145 cpsf1 (ENSDARG00000034178) adck5 (ENSDARG00000075405) ctdp1 (ENSDARG00000017522) KCNG2 (ENSDARG00000035961) SLC66A2 (ENSDARG00000112922) hsbp1l1 (ENSDARG00000075984) septin7a (ENSDARG00000087647) eepd1 (ENSDARG00000071116) ENSDARG00000101686 ENSDARG00000062828 #22 ENSDARG00000062820 #22 ssr2 (ENSDARG00000005230) ENSDARG00000089983 ENSDARG00000034210 ENSDARG00000095458 arhgef1a (ENSDARG00000040380) tpm3 (ENSDARG00000005162) ENSDARG00000074930 ENSDARG00000101721 ENSDARG00000103322 ENSDARG00000100535 pip5k1aa (ENSDARG00000100396) psmd4a (ENSDARG00000101295) ENSDARG00000101029 PSMD4 (ENSDARG00000104952) apoea (ENSDARG00000102004) Cyprininae ANCESTRAL SPECIES ENSGT00950000183007.b.f.i.a.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183007.b.f.i.a.b #22 Golden-line barbel MODERN SPECIES 2341 ENSSGRG00000005540 #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.i.b #22 Cyprininae ANCESTRAL SPECIES 363 ENSGT01090000260033.a.a.b.b.b ENSGT01090000260033.a.a.b.b.a.c.a.a ENSGT01090000260033.a.a.b.b.a.c.b ENSGT00940000155909.o.b.b ENSGT00950000183007.b.f.i.b #22 ENSGT00390000005125.r.a ENSGT00940000160977.f.c ENSGT00940000164926.j ENSGT00940000158341.a.h ENSGT01030000234542.b.a.a.a.a.j ENSGT00940000154371.a.b.b.b ENSGT01030000234606.a.b.o ENSGT00990000209965.a ENSGT00940000171101.a ENSGT00530000064050.a.a ENSGT00940000162287.D.g.b ENSGT00950000182929.B.b.a.e ENSGT00390000003308.a.b.b ENSGT00940000165835.b.b ENSGT00730000111056.h.a Goldfish MODERN SPECIES 38 ENSCARG00000066545 clk2a (ENSCARG00000066066) si:ch211-81a5.8 (ENSCARG00000066027) ENSCARG00000066017 ndufv1 (ENSCARG00000065911) ENSCARG00000065800 ENSCARG00000065788 ENSCARG00000065786 ENSCARG00000065785 ENSCARG00000065780 ENSCARG00000065775 ENSCARG00000065767 ENSCARG00000065758 ENSCARG00000065749 grb10a (ENSCARG00000063852) ENSCARG00000063733 #22 ssr2 (ENSCARG00000063716) ENSCARG00000063705 ENSCARG00000063690 ENSCARG00000063680 arhgef1a (ENSCARG00000062581) tpm3 (ENSCARG00000062276) ENSCARG00000062257 ENSCARG00000062244 ENSCARG00000062234 pip5k1aa (ENSCARG00000062166) ENSCARG00000062062 ENSCARG00000062010 apoea (ENSCARG00000061987) tomm40l (ENSCARG00000061945) ENSCARG00000061853 Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00940000157616.j.a.a ENSGT00390000003774.a.a.c.e ENSGT00390000003774.b.b ENSGT00400000024940.a ENSGT00400000022514.d.b ENSGT00940000154843.F.d.a ENSGT00940000162855.a.a.a.b.b ENSGT00530000063880.b.e.b ENSGT01100000263484.B.b.b.a.a.b ENSGT00390000007776.q ENSGT00940000157594.f ENSGT00940000160140.a.a.a ENSGT01090000260033.a.a.b.b.a.c.a.b ENSGT01030000234589.g.b.b.c ENSGT00940000155909.o.b.b ENSGT00950000183007.b.f.i.b #22 ENSGT00390000005125.r.a ENSGT00940000160977.f.c ENSGT00940000164926.j ENSGT00940000158341.a.h ENSGT01030000234542.b.a.a.a.a.j ENSGT00940000154371.a.b.b.b ENSGT01030000234606.a.b.o ENSGT00990000209965.a ENSGT00940000171101.a ENSGT00530000064050.a.a ENSGT00940000162287.D.g.b ENSGT00950000182929.B.b.a.e ENSGT00940000175701 ENSGT00390000003308.a.b.b ENSGT00940000165835.b.b Common carp reference MODERN SPECIES 31 ENSCCRG00000076741 ENSCCRG00000048111 eppk1 (ENSCCRG00000067005) ENSCCRG00000070090 pleca (ENSCCRG00000003243) TMEM74 (ENSCCRG00000066050) trhrb (ENSCCRG00000011257) nudcd1 (ENSCCRG00000016150) gdf6b (ENSCCRG00000016137) ENSCCRG00000007042 ENSCCRG00000073070 ENSCCRG00000043241 ENSCCRG00000067693 ENSCCRG00000036032 grb10a (ENSCCRG00000041639) ENSCCRG00000078707 #22 ssr2 (ENSCCRG00000065725) ENSCCRG00000027723 ENSCCRG00000076918 arhgef1a (ENSCCRG00000020516) tpm3 (ENSCCRG00000020010) ENSCCRG00000079633 ENSCCRG00000068498 pip5k1aa (ENSCCRG00000007232) ENSCCRG00000072965 apoea (ENSCCRG00000066161) ENSCCRG00000057621 ENSCCRG00000007230 tomm40l (ENSCCRG00000059151) ENSCCRG00000057458 lipea (ENSCCRG00000007486) Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 267 ENSSGRG00000037229 #22 ssr2 (ENSSGRG00000037225) ENSSGRG00000037223 ENSSGRG00000037221 arhgef1a (ENSSGRG00000037219) ENSSGRG00000037218 tpm3 (ENSSGRG00000033544) ENSSGRG00000033514 ENSSGRG00000033511 ENSSGRG00000033510 pip5k1aa (ENSSGRG00000033464) ENSSGRG00000033272 apoea (ENSSGRG00000033270) apoa4a (ENSSGRG00000033269) apoea (ENSSGRG00000033268) ENSSGRG00000033259 Golden-line barbel MODERN SPECIES 4101 ENSSGRG00000006049 #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183007.b.f.j #22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183007.b.f.j #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183007.b.f.j #22 Golden-line barbel MODERN SPECIES 3946 ENSSGRG00000002518 ENSSGRG00000002521 #22 Characiphysae ANCESTRAL SPECIES 9 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 Channel catfish DUPLICATION Channel catfish MODERN SPECIES BET1L (ENSIPUG00000014105) ascc3 (ENSIPUG00000013863) sim1 (ENSIPUG00000013228) cyb5r4 (ENSIPUG00000013073) YME1L1 (ENSIPUG00000013009) ENSIPUG00000012989 fasn2 (ENSIPUG00000012972) RDH12 (ENSIPUG00000012917) DDX6 (ENSIPUG00000012823) ENSIPUG00000012787 cblc (ENSIPUG00000012760) ENSIPUG00000012744 tryp (ENSIPUG00000012702) ENSIPUG00000012680 ENSIPUG00000012655 ENSIPUG00000012630 #22 EIF1B (ENSIPUG00000012511) neurod6 (ENSIPUG00000012489) ccdc129 (ENSIPUG00000012425) ppp1r17 (ENSIPUG00000012399) pde1c (ENSIPUG00000012278) vim (ENSIPUG00000012238) TRDMT1 (ENSIPUG00000012194) CUBN (ENSIPUG00000012044) rsu1 (ENSIPUG00000011971) c1ql3 (ENSIPUG00000011952) dtx3la (ENSIPUG00000011939) ENSIPUG00000011911 STEAP1 (ENSIPUG00000011896) STEAP2 (ENSIPUG00000011885) mmp16 (ENSIPUG00000011816) Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 22 ccsapb (ENSIPUG00000020398) ACT2 (ENSIPUG00000020381) abcb10 (ENSIPUG00000020341) urb2 (ENSIPUG00000020315) ENSIPUG00000020296 ENSIPUG00000020275 DTX4 (ENSIPUG00000020192) ENSIPUG00000020164 FRMD6 (ENSIPUG00000020133) ENSIPUG00000020125 ##22 ENSIPUG00000020118 ENSIPUG00000020111 ENSIPUG00000020099 ENSIPUG00000019892 #22 IRGC (ENSIPUG00000019872) #22 ENSIPUG00000019864 #22 tmx1 (ENSIPUG00000019849) TRIM9 (ENSIPUG00000019785) Pygl (ENSIPUG00000019705) nin (ENSIPUG00000019650) sav1 (ENSIPUG00000019636) ATL1 (ENSIPUG00000019583) map4k5 (ENSIPUG00000019520) cdkl1 (ENSIPUG00000019505) ATP5S (ENSIPUG00000019488) ENSIPUG00000019464 PTK7 (ENSIPUG00000019376) srf (ENSIPUG00000019339) Tmem254 (ENSIPUG00000019312) srr (ENSIPUG00000019247) STK32C (ENSIPUG00000019224) Channel catfish MODERN SPECIES 22 rab4a (ENSIPUG00000020406) ccsapb (ENSIPUG00000020398) ACT2 (ENSIPUG00000020381) abcb10 (ENSIPUG00000020341) urb2 (ENSIPUG00000020315) ENSIPUG00000020296 ENSIPUG00000020275 DTX4 (ENSIPUG00000020192) ENSIPUG00000020164 FRMD6 (ENSIPUG00000020133) ENSIPUG00000020125 ##22 ENSIPUG00000020118 ENSIPUG00000020111 ENSIPUG00000020099 ENSIPUG00000019892 #22 IRGC (ENSIPUG00000019872) #22 ENSIPUG00000019864 #22 tmx1 (ENSIPUG00000019849) TRIM9 (ENSIPUG00000019785) Pygl (ENSIPUG00000019705) nin (ENSIPUG00000019650) sav1 (ENSIPUG00000019636) ATL1 (ENSIPUG00000019583) map4k5 (ENSIPUG00000019520) cdkl1 (ENSIPUG00000019505) ATP5S (ENSIPUG00000019488) ENSIPUG00000019464 PTK7 (ENSIPUG00000019376) srf (ENSIPUG00000019339) Tmem254 (ENSIPUG00000019312) srr (ENSIPUG00000019247) Channel catfish MODERN SPECIES 22 rhoua (ENSIPUG00000020445) rab4a (ENSIPUG00000020406) ccsapb (ENSIPUG00000020398) ACT2 (ENSIPUG00000020381) abcb10 (ENSIPUG00000020341) urb2 (ENSIPUG00000020315) ENSIPUG00000020296 ENSIPUG00000020275 DTX4 (ENSIPUG00000020192) ENSIPUG00000020164 FRMD6 (ENSIPUG00000020133) ENSIPUG00000020125 ##22 ENSIPUG00000020118 ENSIPUG00000020111 ENSIPUG00000020099 ENSIPUG00000019892 #22 IRGC (ENSIPUG00000019872) #22 ENSIPUG00000019864 #22 tmx1 (ENSIPUG00000019849) TRIM9 (ENSIPUG00000019785) Pygl (ENSIPUG00000019705) nin (ENSIPUG00000019650) sav1 (ENSIPUG00000019636) ATL1 (ENSIPUG00000019583) map4k5 (ENSIPUG00000019520) cdkl1 (ENSIPUG00000019505) ATP5S (ENSIPUG00000019488) ENSIPUG00000019464 PTK7 (ENSIPUG00000019376) srf (ENSIPUG00000019339) Tmem254 (ENSIPUG00000019312) Characiphysae_b ANCESTRAL SPECIES 29 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 Characoidei ANCESTRAL SPECIES 19 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 ENSGT00940000160573 Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 1 ASCC3 (ENSAMXG00000001395) sim1a (ENSAMXG00000035738) cyb5r4 (ENSAMXG00000029349) YME1L1 (ENSAMXG00000001328) ENSAMXG00000001318 PTCHD3 (ENSAMXG00000001309) fasn2 (ENSAMXG00000001302) PTCHD3 (ENSAMXG00000037708) rdh12l (ENSAMXG00000001299) ENSAMXG00000032542 ENSAMXG00000001295 cblc (ENSAMXG00000001292) ENSAMXG00000034639 ENSAMXG00000042458 ENSAMXG00000026039 #22 ENSAMXG00000001283 #22 eif1b (ENSAMXG00000033877) neurod6a (ENSAMXG00000001281) ENSAMXG00000001279 ppp1r17 (ENSAMXG00000035445) PDE1C (ENSAMXG00000001277) ENSAMXG00000039699 vim (ENSAMXG00000000055) trdmt1 (ENSAMXG00000000066) CUBN (ENSAMXG00000000074) RSU1 (ENSAMXG00000000077) C1QL3 (ENSAMXG00000006424) dtx3la (ENSAMXG00000034286) ENSAMXG00000037506 STEAP1 (ENSAMXG00000000081) STEAP2 (ENSAMXG00000000086) Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 17 zgc:153169 (ENSAMXG00000003589) tbp (ENSAMXG00000032131) pdcd2 (ENSAMXG00000003564) rhoua (ENSAMXG00000042903) rab4a (ENSAMXG00000003534) ccsapb (ENSAMXG00000034109) acta1b (ENSAMXG00000030355) ABCB10 (ENSAMXG00000003488) urb2 (ENSAMXG00000003474) ENSAMXG00000034488 ENSAMXG00000003471 ENSAMXG00000033983 ENSAMXG00000039028 ENSAMXG00000003437 frmd6 (ENSAMXG00000029589) ENSAMXG00000003336 #22 ENSAMXG00000003370 #22 ENSAMXG00000034005 ENSAMXG00000003353 ##22 ENSAMXG00000041738 #22 tmx1 (ENSAMXG00000031685) trim9 (ENSAMXG00000041762) pygl (ENSAMXG00000003277) NIN (ENSAMXG00000003264) sav1 (ENSAMXG00000003247) atl1 (ENSAMXG00000003230) map4k5 (ENSAMXG00000003211) cdkl1 (ENSAMXG00000003187) dmac2l (ENSAMXG00000034511) ENSAMXG00000003156 PTK7 (ENSAMXG00000003135) Mexicana tetra MODERN SPECIES 17 tbp (ENSAMXG00000032131) pdcd2 (ENSAMXG00000003564) rhoua (ENSAMXG00000042903) rab4a (ENSAMXG00000003534) ccsapb (ENSAMXG00000034109) acta1b (ENSAMXG00000030355) ABCB10 (ENSAMXG00000003488) urb2 (ENSAMXG00000003474) ENSAMXG00000034488 ENSAMXG00000003471 ENSAMXG00000033983 ENSAMXG00000039028 ENSAMXG00000003437 frmd6 (ENSAMXG00000029589) ENSAMXG00000003336 #22 ENSAMXG00000003370 #22 ENSAMXG00000034005 ENSAMXG00000003353 ##22 ENSAMXG00000041738 #22 tmx1 (ENSAMXG00000031685) trim9 (ENSAMXG00000041762) pygl (ENSAMXG00000003277) NIN (ENSAMXG00000003264) sav1 (ENSAMXG00000003247) atl1 (ENSAMXG00000003230) map4k5 (ENSAMXG00000003211) cdkl1 (ENSAMXG00000003187) dmac2l (ENSAMXG00000034511) ENSAMXG00000003156 PTK7 (ENSAMXG00000003135) srfb (ENSAMXG00000036408) Mexicana tetra MODERN SPECIES 17 rab4a (ENSAMXG00000003534) ccsapb (ENSAMXG00000034109) acta1b (ENSAMXG00000030355) ABCB10 (ENSAMXG00000003488) urb2 (ENSAMXG00000003474) ENSAMXG00000034488 ENSAMXG00000003471 ENSAMXG00000033983 ENSAMXG00000039028 ENSAMXG00000003437 frmd6 (ENSAMXG00000029589) ENSAMXG00000003336 #22 ENSAMXG00000003370 #22 ENSAMXG00000034005 ENSAMXG00000003353 ##22 ENSAMXG00000041738 #22 tmx1 (ENSAMXG00000031685) trim9 (ENSAMXG00000041762) pygl (ENSAMXG00000003277) NIN (ENSAMXG00000003264) sav1 (ENSAMXG00000003247) atl1 (ENSAMXG00000003230) map4k5 (ENSAMXG00000003211) cdkl1 (ENSAMXG00000003187) dmac2l (ENSAMXG00000034511) ENSAMXG00000003156 PTK7 (ENSAMXG00000003135) srfb (ENSAMXG00000036408) tmem254 (ENSAMXG00000029400) ENSAMXG00000003097 STK32C (ENSAMXG00000034789) Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 67 cyb5r4 (ENSPNAG00000007004) YME1L1 (ENSPNAG00000024278) ENSPNAG00000024168 PTCHD3 (ENSPNAG00000024149) fasn2 (ENSPNAG00000003808) PTCHD3 (ENSPNAG00000024113) rdh12l (ENSPNAG00000004960) ENSPNAG00000024072 ENSPNAG00000024001 cblc (ENSPNAG00000023979) ENSPNAG00000023961 ENSPNAG00000023950 ENSPNAG00000023934 #22 eif1b (ENSPNAG00000023915) neurod6a (ENSPNAG00000006654) ENSPNAG00000005636 ppp1r17 (ENSPNAG00000003794) PDE1C (ENSPNAG00000023833) ENSPNAG00000003786 vim (ENSPNAG00000023766) trdmt1 (ENSPNAG00000023720) CUBN (ENSPNAG00000023645) RSU1 (ENSPNAG00000003735) C1QL3 (ENSPNAG00000022757) dtx3la (ENSPNAG00000022740) ENSPNAG00000022731 STEAP1 (ENSPNAG00000022718) STEAP2 (ENSPNAG00000022702) Red-bellied piranha MODERN SPECIES 45 rhoua (ENSPNAG00000006537) rab4a (ENSPNAG00000002943) ccsapb (ENSPNAG00000004812) acta1b (ENSPNAG00000013766) ABCB10 (ENSPNAG00000002919) urb2 (ENSPNAG00000013684) ENSPNAG00000002880 ENSPNAG00000013646 ENSPNAG00000013639 ENSPNAG00000013603 ENSPNAG00000002830 ENSPNAG00000013563 ENSPNAG00000013540 frmd6 (ENSPNAG00000002800) ENSPNAG00000013489 ##22 irgf1 (ENSPNAG00000002770) #22 tmx1 (ENSPNAG00000013470) trim9 (ENSPNAG00000013466) pygl (ENSPNAG00000013405) NIN (ENSPNAG00000013309) sav1 (ENSPNAG00000002640) atl1 (ENSPNAG00000002623) map4k5 (ENSPNAG00000013153) cdkl1 (ENSPNAG00000002502) dmac2l (ENSPNAG00000012970) klc4 (ENSPNAG00000002482) PTK7 (ENSPNAG00000012880) srfb (ENSPNAG00000002394) tmem254 (ENSPNAG00000012736) ENSPNAG00000002368 STK32C (ENSPNAG00000012642) Electric eel DUPLICATION Electric eel MODERN SPECIES 11 GRIK2 (ENSEEEG00000009188) ASCC3 (ENSEEEG00000009195) sim1a (ENSEEEG00000009202) cyb5r4 (ENSEEEG00000009205) YME1L1 (ENSEEEG00000009208) ENSEEEG00000009442 fasn2 (ENSEEEG00000009444) ENSEEEG00000009446 ENSEEEG00000009448 rdh12l (ENSEEEG00000009449) ENSEEEG00000009455 cblc (ENSEEEG00000009460) ENSEEEG00000009486 ENSEEEG00000009868 ENSEEEG00000009869 #22 eif1b (ENSEEEG00000009871) neurod6a (ENSEEEG00000009875) ENSEEEG00000009877 ppp1r17 (ENSEEEG00000009880) PDE1C (ENSEEEG00000009882) ENSEEEG00000009884 vim (ENSEEEG00000009887) trdmt1 (ENSEEEG00000009889) CUBN (ENSEEEG00000009911) RSU1 (ENSEEEG00000010004) C1QL3 (ENSEEEG00000010005) STEAP1 (ENSEEEG00000010008) STEAP2 (ENSEEEG00000010013) MMP16 (ENSEEEG00000010014) ENSEEEG00000010019 Electric eel MODERN SPECIES 343 ENSEEEG00000016463 urb2 (ENSEEEG00000016462) ENSEEEG00000016460 ENSEEEG00000016458 frmd6 (ENSEEEG00000016456) ENSEEEG00000016454 ##22 irgf1 (ENSEEEG00000016453) #22 tmx1 (ENSEEEG00000016451) trim9 (ENSEEEG00000016450) pygl (ENSEEEG00000013848) sav1 (ENSEEEG00000013319) atl1 (ENSEEEG00000013295) map4k5 (ENSEEEG00000013251) dmac2l (ENSEEEG00000013246) ENSEEEG00000013143 ENSEEEG00000013123 ENSEEEG00000013122 ENSEEEG00000013119 gfm1 (ENSEEEG00000012450) lxn (ENSEEEG00000012438) MFSD1 (ENSEEEG00000012431) Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 8 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 ENSECRG00000021555 ENSECRG00000021550 ENSECRG00000021529 ENSECRG00000021516 Reedfish MODERN SPECIES 8 hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 ENSECRG00000021555 ENSECRG00000021550 ENSECRG00000021529 ENSECRG00000021516 ENSECRG00000021501 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 3 syngr1a (ENSECRG00000009497) rpl3 (ENSECRG00000009532) IFT27 (ENSECRG00000009574) cacng2a (ENSECRG00000009584) ENSECRG00000009595 tmem150b (ENSECRG00000009613) ENSECRG00000009621 ENSECRG00000009632 ENSECRG00000009646 ENSECRG00000009654 #22 ENSECRG00000009662 ENSECRG00000009668 ENSECRG00000009679 ENSECRG00000009690 ENSECRG00000009695 ENSECRG00000009703 #22 ENSECRG00000009713 #22 ENSECRG00000009727 ENSECRG00000009750 ENSECRG00000009759 #22 ENSECRG00000009769 #22 ENSECRG00000009776 #22 ENSECRG00000009803 ENSECRG00000009852 #22 ENSECRG00000009858 ENSECRG00000009864 ENSECRG00000009873 ncf4 (ENSECRG00000009892) PVALB (ENSECRG00000009903) ENSECRG00000009915 pla2g6 (ENSECRG00000009927) Reedfish MODERN SPECIES 3 rpl3 (ENSECRG00000009532) IFT27 (ENSECRG00000009574) cacng2a (ENSECRG00000009584) ENSECRG00000009595 tmem150b (ENSECRG00000009613) ENSECRG00000009621 ENSECRG00000009632 ENSECRG00000009646 ENSECRG00000009654 #22 ENSECRG00000009662 ENSECRG00000009668 ENSECRG00000009679 ENSECRG00000009690 ENSECRG00000009695 ENSECRG00000009703 #22 ENSECRG00000009713 #22 ENSECRG00000009727 ENSECRG00000009750 ENSECRG00000009759 #22 ENSECRG00000009769 #22 ENSECRG00000009776 #22 ENSECRG00000009803 ENSECRG00000009852 #22 ENSECRG00000009858 ENSECRG00000009864 ENSECRG00000009873 ncf4 (ENSECRG00000009892) PVALB (ENSECRG00000009903) ENSECRG00000009915 pla2g6 (ENSECRG00000009927) ENSECRG00000009956 Reedfish MODERN SPECIES 3 ENSECRG00000010009 ENSECRG00000010001 ENSECRG00000009995 ENSECRG00000009989 ENSECRG00000009956 pla2g6 (ENSECRG00000009927) ENSECRG00000009915 PVALB (ENSECRG00000009903) ncf4 (ENSECRG00000009892) ENSECRG00000009873 ENSECRG00000009864 ENSECRG00000009858 ENSECRG00000009852 #22 ENSECRG00000009803 ENSECRG00000009776 #22 ENSECRG00000009769 #22 ENSECRG00000009759 #22 ENSECRG00000009750 ENSECRG00000009727 ENSECRG00000009713 #22 ENSECRG00000009703 #22 ENSECRG00000009695 ENSECRG00000009690 ENSECRG00000009679 ENSECRG00000009668 ENSECRG00000009662 ENSECRG00000009654 #22 ENSECRG00000009646 ENSECRG00000009632 ENSECRG00000009621 tmem150b (ENSECRG00000009613) Reedfish MODERN SPECIES 3 ENSECRG00000010001 ENSECRG00000009995 ENSECRG00000009989 ENSECRG00000009956 pla2g6 (ENSECRG00000009927) ENSECRG00000009915 PVALB (ENSECRG00000009903) ncf4 (ENSECRG00000009892) ENSECRG00000009873 ENSECRG00000009864 ENSECRG00000009858 ENSECRG00000009852 #22 ENSECRG00000009803 ENSECRG00000009776 #22 ENSECRG00000009769 #22 ENSECRG00000009759 #22 ENSECRG00000009750 ENSECRG00000009727 ENSECRG00000009713 #22 ENSECRG00000009703 #22 ENSECRG00000009695 ENSECRG00000009690 ENSECRG00000009679 ENSECRG00000009668 ENSECRG00000009662 ENSECRG00000009654 #22 ENSECRG00000009646 ENSECRG00000009632 ENSECRG00000009621 tmem150b (ENSECRG00000009613) ENSECRG00000009595 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 3 ENSECRG00000009858 ENSECRG00000009852 #22 ENSECRG00000009803 ENSECRG00000009776 #22 ENSECRG00000009769 #22 ENSECRG00000009759 #22 ENSECRG00000009750 ENSECRG00000009727 ENSECRG00000009713 #22 ENSECRG00000009703 #22 ENSECRG00000009695 ENSECRG00000009690 ENSECRG00000009679 ENSECRG00000009668 ENSECRG00000009662 ENSECRG00000009654 #22 ENSECRG00000009646 ENSECRG00000009632 ENSECRG00000009621 tmem150b (ENSECRG00000009613) ENSECRG00000009595 cacng2a (ENSECRG00000009584) IFT27 (ENSECRG00000009574) rpl3 (ENSECRG00000009532) syngr1a (ENSECRG00000009497) TAB1 (ENSECRG00000009477) mgat3a (ENSECRG00000009456) ENSECRG00000009438 eif3d (ENSECRG00000009418) ENSECRG00000009405 ENSECRG00000009359 Reedfish MODERN SPECIES 3 ENSECRG00000009646 ENSECRG00000009654 #22 ENSECRG00000009662 ENSECRG00000009668 ENSECRG00000009679 ENSECRG00000009690 ENSECRG00000009695 ENSECRG00000009703 #22 ENSECRG00000009713 #22 ENSECRG00000009727 ENSECRG00000009750 ENSECRG00000009759 #22 ENSECRG00000009769 #22 ENSECRG00000009776 #22 ENSECRG00000009803 ENSECRG00000009852 #22 ENSECRG00000009858 ENSECRG00000009864 ENSECRG00000009873 ncf4 (ENSECRG00000009892) PVALB (ENSECRG00000009903) ENSECRG00000009915 pla2g6 (ENSECRG00000009927) ENSECRG00000009956 ENSECRG00000009989 ENSECRG00000009995 ENSECRG00000010001 ENSECRG00000010009 ENSECRG00000010014 ENSECRG00000010019 ENSECRG00000010029 Reedfish MODERN SPECIES 3 ENSECRG00000010014 ENSECRG00000010009 ENSECRG00000010001 ENSECRG00000009995 ENSECRG00000009989 ENSECRG00000009956 pla2g6 (ENSECRG00000009927) ENSECRG00000009915 PVALB (ENSECRG00000009903) ncf4 (ENSECRG00000009892) ENSECRG00000009873 ENSECRG00000009864 ENSECRG00000009858 ENSECRG00000009852 #22 ENSECRG00000009803 ENSECRG00000009776 #22 ENSECRG00000009769 #22 ENSECRG00000009759 #22 ENSECRG00000009750 ENSECRG00000009727 ENSECRG00000009713 #22 ENSECRG00000009703 #22 ENSECRG00000009695 ENSECRG00000009690 ENSECRG00000009679 ENSECRG00000009668 ENSECRG00000009662 ENSECRG00000009654 #22 ENSECRG00000009646 ENSECRG00000009632 ENSECRG00000009621 Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.a ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.a ##22 Sauria ANCESTRAL SPECIES 43 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000162297.g ENSGT00940000154265 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00940000162297.h ENSGT00390000013102.f ENSGT00940000161223 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 Lepidosauria ANCESTRAL SPECIES 51 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 Episquamata ANCESTRAL SPECIES 7 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.`c ENSGT00940000162297.g ENSGT00940000154265.yb ENSGT00390000010549 ENSGT00940000160476.b ENSGT00960000189159 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT01030000234540.B.b.a.b ENSGT00390000003568 Laterata ANCESTRAL SPECIES 17 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000162297.g.e.b ENSGT00940000154265.`c.c.b ENSGT00940000162297.g.e.a ENSGT00940000154265.`c.c.a ENSGT00940000154265.`c.d ENSGT00940000162297.g.f ENSGT00940000154265.yb ENSGT00390000013102.e.b ENSGT00940000161223 ENSGT00950000185295 ENSGT00960000190411 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00730000113550 ENSGT00940000163304.b.a.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00940000164395.b Common wall lizard MODERN SPECIES 16 ENSPMRG00000008878 ENSPMRG00000008894 ENSPMRG00000008898 ENSPMRG00000008905 ENSPMRG00000008907 ENSPMRG00000008910 ENSPMRG00000008916 ENSPMRG00000008921 ENSPMRG00000008923 RPS19 (ENSPMRG00000008934) CADM4 (ENSPMRG00000008941) ENSPMRG00000008952 ENSPMRG00000008960 ZNF576 (ENSPMRG00000008963) ENSPMRG00000008976 ##22 ENSPMRG00000008986 ##22 ENSPMRG00000008989 ENSPMRG00000008996 ENSPMRG00000009002 ENSPMRG00000009006 ENSPMRG00000009020 ENSPMRG00000009021 ENSPMRG00000009030 ENSPMRG00000009036 ENSPMRG00000009043 ENSPMRG00000009047 ENSPMRG00000009059 ENSPMRG00000009068 ENSPMRG00000009072 XRCC1 (ENSPMRG00000009083) ENSPMRG00000009105 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005822 ENSSMRG00000005808 ENSSMRG00000005807 ENSSMRG00000005806 ENSSMRG00000005805 ENSSMRG00000005804 ENSSMRG00000005788 ENSSMRG00000005772 ENSSMRG00000005631 ENSSMRG00000005627 CADM4 (ENSSMRG00000005596) ENSSMRG00000005595 ENSSMRG00000005593 ZNF576 (ENSSMRG00000005588) ENSSMRG00000005586 ##22 ENSSMRG00000005585 ##22 XRCC1 (ENSSMRG00000005576) ZNF575 (ENSSMRG00000005573) ETHE1 (ENSSMRG00000005572) PHLDB3 (ENSSMRG00000005565) ENSSMRG00000005562 ENSSMRG00000005560 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005545 ENSSMRG00000005530 ENSSMRG00000005529 ##22 ENSSMRG00000005526 ENSSMRG00000005514 ENSSMRG00000005499 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005472 ##22 Toxicofera ANCESTRAL SPECIES 34 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00730000113550 ENSGT00940000163304.b.a.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b Elapidae ANCESTRAL SPECIES 9 ENSGT00940000163576 ENSGT00950000185905 ENSGT00940000158211 ENSGT01100000263489.a.a.b.b.c.a ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.`c ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000010549 ENSGT00940000160476.b ENSGT00960000189159 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a Elapidae_a ANCESTRAL SPECIES 33 ENSGT00940000163576 ENSGT00950000185905 ENSGT00940000158211 ENSGT01100000263489.a.a.b.b.c.a ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.`c ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Acanthophiinae ANCESTRAL SPECIES 32 ENSGT00960000189159 ENSGT00940000158852 ENSGT00940000161799 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.`c ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00990000208224.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Eastern brown snake MODERN SPECIES 77 ENSPTXG00000019102 ENSPTXG00000019122 GRIK5 (ENSPTXG00000019124) ZNF574 (ENSPTXG00000019128) DEDD2 (ENSPTXG00000019130) ZNF526 (ENSPTXG00000019131) GSK3A (ENSPTXG00000019133) ENSPTXG00000019134 CIC (ENSPTXG00000019136) PAFAH1B3 (ENSPTXG00000019138) ENSPTXG00000019140 RPS19 (ENSPTXG00000019142) CADM4 (ENSPTXG00000019143) ENSPTXG00000013276 ENSPTXG00000013278 ##22 ENSPTXG00000013279 ##22 ENSPTXG00000013280 ENSPTXG00000013281 Mainland tiger snake MODERN SPECIES 155 ENSNSUG00000009871 ATP1A3 (ENSNSUG00000009829) GRIK5 (ENSNSUG00000009828) ZNF574 (ENSNSUG00000009827) DEDD2 (ENSNSUG00000009826) ZNF526 (ENSNSUG00000009825) GSK3A (ENSNSUG00000009814) ENSNSUG00000009813 CIC (ENSNSUG00000009812) GBP6 (ENSNSUG00000009811) ENSNSUG00000009810 RPS19 (ENSNSUG00000009809) CADM4 (ENSNSUG00000009808) ENSNSUG00000009807 ENSNSUG00000009805 ##22 ENSNSUG00000009804 ##22 ENSNSUG00000009803 ENSNSUG00000009802 XRCC1 (ENSNSUG00000009801) ETHE1 (ENSNSUG00000009800) ENSNSUG00000009798 ENSNSUG00000009797 LYPD3 (ENSNSUG00000009796) ENSNSUG00000009793 ENSNSUG00000009792 ##22 Blue-lipped sea krait MODERN SPECIES 5246 ENSLLTG00000006012 ##22 ENSLLTG00000006018 ##22 Indian cobra MODERN SPECIES 11 ZNF574 (ENSNNAG00000005293) ENSNNAG00000005281 ENSNNAG00000005224 DEDD2 (ENSNNAG00000005193) GSK3A (ENSNNAG00000005075) ENSNNAG00000005013 CIC (ENSNNAG00000004736) PAFAH1B3 (ENSNNAG00000004692) ENSNNAG00000004452 ENSNNAG00000004375 ENSNNAG00000004342 ENSNNAG00000004297 CADM4 (ENSNNAG00000004262) ENSNNAG00000004229 ENSNNAG00000004215 ##22 ENSNNAG00000004196 ##22 ENSNNAG00000004169 ENSNNAG00000004164 ENSNNAG00000004130 ENSNNAG00000004107 XRCC1 (ENSNNAG00000003829) ENSNNAG00000003780 ENSNNAG00000003769 ENSNNAG00000003756 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003728 ENSNNAG00000003711 ENSNNAG00000003701 ##22 ENSNNAG00000003685 ENSNNAG00000003672 ENSNNAG00000003631 tuatara MODERN SPECIES 1580 ERF (ENSSPUG00000016555) ENSSPUG00000016548 ENSSPUG00000016538 PAFAH1B3 (ENSSPUG00000016531) ENSSPUG00000016520 ENSSPUG00000016510 ENSSPUG00000016498 ENSSPUG00000016293 ENSSPUG00000016251 ##22 ENSSPUG00000016105 RPS19 (ENSSPUG00000016051) CADM4 (ENSSPUG00000015976) ENSSPUG00000015950 ZNF576 (ENSSPUG00000015942) ENSSPUG00000015934 ##22 ENSSPUG00000015920 ##22 Archelosauria ANCESTRAL SPECIES 48 ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.bc ENSGT00940000162297.g ENSGT00940000154265.ac.a ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00940000162297.h ENSGT00390000013102.f ENSGT00940000161223 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 Cryptodira ANCESTRAL SPECIES 68 ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00940000157292 ENSGT00940000159960 ENSGT00950000183199.a.b ENSGT00940000154265.bc ENSGT00940000162297.g ENSGT00940000154265.ac.a ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00390000013102.e.b ENSGT00940000161223 ENSGT00950000185295 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.c.a Testudinoidea ANCESTRAL SPECIES 73 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000172339 ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Testudinidae ANCESTRAL SPECIES 85 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.e.a ENSGT01030000234555.a.a.b.b ENSGT00940000154265.ac.a.c ENSGT00940000154265.bc.a.a.b.b ENSGT00960000190411 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000172339 ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005013000 ENSGEVG00005012907 ENSGEVG00005012863 ENSGEVG00005012850 ENSGEVG00005012802 ENSGEVG00005017604 ENSGEVG00005017544 ENSGEVG00005017527 CADM4 (ENSGEVG00005017512) ENSGEVG00005017498 ENSGEVG00005017373 ENSGEVG00005017306 ENSGEVG00005017282 ENSGEVG00005017264 ##22 ENSGEVG00005017257 ENSGEVG00005017252 ##22 XRCC1 (ENSGEVG00005017222) ENSGEVG00005017202 ETHE1 (ENSGEVG00005017180) ENSGEVG00005017155 ENSGEVG00005017130 ENSGEVG00005017110 ENSGEVG00005017101 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017046 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 Abingdon island giant tortoise MODERN SPECIES 2699 ENSCABG00000012334 ENSCABG00000012332 ##22 ENSCABG00000012330 ##22 ENSCABG00000012279 ENSCABG00000012263 ENSCABG00000012260 ENSCABG00000012258 ENSCABG00000012256 ENSCABG00000012255 ENSCABG00000012254 Emydidae ANCESTRAL SPECIES 115 ENSGT00960000190411 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 painted turtle MODERN SPECIES 1075 ENSCPBG00000013143 ENSCPBG00000013141 ZNF576 (ENSCPBG00000013139) ENSCPBG00000013137 ##22 ENSCPBG00000013135 ##22 ENSCPBG00000013132 ENSCPBG00000013130 XRCC1 (ENSCPBG00000013125) ETHE1 (ENSCPBG00000013116) ENSCPBG00000013107 ENSCPBG00000013103 ENSCPBG00000013101 ENSCPBG00000013099 LYPD3 (ENSCPBG00000013098) ENSCPBG00000013096 ENSCPBG00000013092 ENSCPBG00000013089 ##22 ENSCPBG00000013088 Three-toed box turtle MODERN SPECIES 1527 ENSTMTG00000018801 ##22 Anura ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.a ##22 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 2 ENSLLEG00000028428 ENSLLEG00000028516 ENSLLEG00000028549 ENSLLEG00000028882 ENSLLEG00000029066 ENSLLEG00000029086 ENSLLEG00000029121 ENSLLEG00000029128 ENSLLEG00000029140 ENSLLEG00000029145 ENSLLEG00000029155 ENSLLEG00000017755 ENSLLEG00000017937 HPN (ENSLLEG00000018127) ENSLLEG00000018223 ##22 ENSLLEG00000018240 ##22 ENSLLEG00000018261 ##22 ENSLLEG00000018315 SCN1B (ENSLLEG00000018348) ENSLLEG00000018425 PSMC4 (ENSLLEG00000018630) GRAMD1A (ENSLLEG00000019808) ENSLLEG00000020115 ENSLLEG00000020154 ENSLLEG00000020175 ENSLLEG00000020208 ENSLLEG00000020240 ENSLLEG00000020317 ENSLLEG00000020390 ENSLLEG00000020442 ENSLLEG00000020466 Leishan spiny toad MODERN SPECIES 8 PDSS1 (ENSLLEG00000019009) ENSLLEG00000018786 APBB1IP (ENSLLEG00000018607) ENSLLEG00000018576 ENSLLEG00000018476 GAD2 (ENSLLEG00000017960) ENSLLEG00000017920 MYO3A (ENSLLEG00000017488) ENSLLEG00000017451 GPR158 (ENSLLEG00000017327) THNSL1 (ENSLLEG00000017280) ENSLLEG00000017232 ENSLLEG00000017175 PRTFDC1 (ENSLLEG00000017040) ENSLLEG00000017008 ENSLLEG00000016990 ##22 ENSLLEG00000016961 ##22 ARHGAP21 (ENSLLEG00000014767) KIAA1217 (ENSLLEG00000014014) ENSLLEG00000013961 ENSLLEG00000013945 ENSLLEG00000013928 OTUD1 (ENSLLEG00000013846) ENSLLEG00000013833 ENSLLEG00000013812 ENSLLEG00000013329 PTF1A (ENSLLEG00000013264) ENSLLEG00000013218 ENSLLEG00000013175 ARMC3 (ENSLLEG00000013043) ENSLLEG00000013028 Leishan spiny toad MODERN SPECIES 2 ENSLLEG00000028368 ENSLLEG00000028428 ENSLLEG00000028516 ENSLLEG00000028549 ENSLLEG00000028882 ENSLLEG00000029066 ENSLLEG00000029086 ENSLLEG00000029121 ENSLLEG00000029128 ENSLLEG00000029140 ENSLLEG00000029145 ENSLLEG00000029155 ENSLLEG00000017755 ENSLLEG00000017937 HPN (ENSLLEG00000018127) ENSLLEG00000018223 ##22 ENSLLEG00000018240 ##22 ENSLLEG00000018261 ##22 ENSLLEG00000018315 SCN1B (ENSLLEG00000018348) ENSLLEG00000018425 PSMC4 (ENSLLEG00000018630) GRAMD1A (ENSLLEG00000019808) ENSLLEG00000020115 ENSLLEG00000020154 ENSLLEG00000020175 ENSLLEG00000020208 ENSLLEG00000020240 ENSLLEG00000020317 ENSLLEG00000020390 ENSLLEG00000020442 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000018786 APBB1IP (ENSLLEG00000018607) ENSLLEG00000018576 ENSLLEG00000018476 GAD2 (ENSLLEG00000017960) ENSLLEG00000017920 MYO3A (ENSLLEG00000017488) ENSLLEG00000017451 GPR158 (ENSLLEG00000017327) THNSL1 (ENSLLEG00000017280) ENSLLEG00000017232 ENSLLEG00000017175 PRTFDC1 (ENSLLEG00000017040) ENSLLEG00000017008 ENSLLEG00000016990 ##22 ENSLLEG00000016961 ##22 ARHGAP21 (ENSLLEG00000014767) KIAA1217 (ENSLLEG00000014014) ENSLLEG00000013961 ENSLLEG00000013945 ENSLLEG00000013928 OTUD1 (ENSLLEG00000013846) ENSLLEG00000013833 ENSLLEG00000013812 ENSLLEG00000013329 PTF1A (ENSLLEG00000013264) ENSLLEG00000013218 ENSLLEG00000013175 ARMC3 (ENSLLEG00000013043) ENSLLEG00000013028 PIP4K2A (ENSLLEG00000012885) Leishan spiny toad MODERN SPECIES 2 ENSLLEG00000028516 ENSLLEG00000028549 ENSLLEG00000028882 ENSLLEG00000029066 ENSLLEG00000029086 ENSLLEG00000029121 ENSLLEG00000029128 ENSLLEG00000029140 ENSLLEG00000029145 ENSLLEG00000029155 ENSLLEG00000017755 ENSLLEG00000017937 HPN (ENSLLEG00000018127) ENSLLEG00000018223 ##22 ENSLLEG00000018240 ##22 ENSLLEG00000018261 ##22 ENSLLEG00000018315 SCN1B (ENSLLEG00000018348) ENSLLEG00000018425 PSMC4 (ENSLLEG00000018630) GRAMD1A (ENSLLEG00000019808) ENSLLEG00000020115 ENSLLEG00000020154 ENSLLEG00000020175 ENSLLEG00000020208 ENSLLEG00000020240 ENSLLEG00000020317 ENSLLEG00000020390 ENSLLEG00000020442 ENSLLEG00000020466 ENSLLEG00000020530 Euteleostomi ANCESTRAL SPECIES 1431 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.a.a.b ##22 Sarcopterygii ANCESTRAL SPECIES 855 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.a.a.b ##22 ENSGT00950000183007.b.i.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.b ##22 Amniota ANCESTRAL SPECIES 219 ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000163304.b.a ENSGT00950000183007.b.i.a.a ##22 Sauria ANCESTRAL SPECIES 43 ENSGT00390000013102.e.a ENSGT00940000162297.h ENSGT00390000013102.f ENSGT00940000161223 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 Lepidosauria ANCESTRAL SPECIES 51 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.B.b.b.a.j ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a ENSGT00940000160467 ENSGT00940000167735 Episquamata ANCESTRAL SPECIES 7 ENSGT00940000161799 ENSGT00940000160115 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT01030000234540.B.b.a.b ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.b.b.a.j.a.b ENSGT01020000230438.A.a.a.b Laterata ANCESTRAL SPECIES 17 ENSGT00950000185295 ENSGT00960000190411 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00730000113550 ENSGT00940000163304.b.a.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00940000164395.b Common wall lizard MODERN SPECIES 16 ENSPMRG00000009047 ENSPMRG00000009059 ENSPMRG00000009068 ENSPMRG00000009072 XRCC1 (ENSPMRG00000009083) ENSPMRG00000009105 ETHE1 (ENSPMRG00000009113) ENSPMRG00000009122 ENSPMRG00000009141 ENSPMRG00000009144 ENSPMRG00000009147 LYPD3 (ENSPMRG00000009149) ENSPMRG00000009158 ENSPMRG00000009165 ENSPMRG00000009172 ENSPMRG00000009181 ##22 ENSPMRG00000009185 ENSPMRG00000009196 ENSPMRG00000009203 ENSPMRG00000009218 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 Argentine black and white tegu MODERN SPECIES 59 CADM4 (ENSSMRG00000005596) ENSSMRG00000005595 ENSSMRG00000005593 ZNF576 (ENSSMRG00000005588) ENSSMRG00000005586 ##22 ENSSMRG00000005585 ##22 XRCC1 (ENSSMRG00000005576) ZNF575 (ENSSMRG00000005573) ETHE1 (ENSSMRG00000005572) PHLDB3 (ENSSMRG00000005565) ENSSMRG00000005562 ENSSMRG00000005560 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005545 ENSSMRG00000005530 ENSSMRG00000005529 ##22 ENSSMRG00000005526 ENSSMRG00000005514 ENSSMRG00000005499 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005468 ##22 ENSSMRG00000005457 ENSSMRG00000005434 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005401 ##22 IRGC (ENSSMRG00000005398) ##22 SMG9 (ENSSMRG00000005393) Toxicofera ANCESTRAL SPECIES 34 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00730000113550 ENSGT00940000163304.b.a.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b ENSGT01080000257333.D.a.b ENSGT00940000160467 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01020000230438.B.a.b Elapidae_a ANCESTRAL SPECIES 33 ENSGT00940000154265.`c ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Acanthophiinae ANCESTRAL SPECIES 32 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00950000185295 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00990000208224.a ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Mainland tiger snake MODERN SPECIES 155 GBP6 (ENSNSUG00000009811) ENSNSUG00000009810 RPS19 (ENSNSUG00000009809) CADM4 (ENSNSUG00000009808) ENSNSUG00000009807 ENSNSUG00000009805 ##22 ENSNSUG00000009804 ##22 ENSNSUG00000009803 ENSNSUG00000009802 XRCC1 (ENSNSUG00000009801) ETHE1 (ENSNSUG00000009800) ENSNSUG00000009798 ENSNSUG00000009797 LYPD3 (ENSNSUG00000009796) ENSNSUG00000009793 ENSNSUG00000009792 ##22 Eastern brown snake MODERN SPECIES 261 ENSPTXG00000016492 ZNF575 (ENSPTXG00000016495) ETHE1 (ENSPTXG00000009880) ENSPTXG00000009882 ENSPTXG00000009883 LYPD3 (ENSPTXG00000009885) ENSPTXG00000009888 ENSPTXG00000009890 ##22 ENSPTXG00000009892 Blue-lipped sea krait MODERN SPECIES 8652 ENSLLTG00000006013 ##22 Indian cobra MODERN SPECIES 11 CADM4 (ENSNNAG00000004262) ENSNNAG00000004229 ENSNNAG00000004215 ##22 ENSNNAG00000004196 ##22 ENSNNAG00000004169 ENSNNAG00000004164 ENSNNAG00000004130 ENSNNAG00000004107 XRCC1 (ENSNNAG00000003829) ENSNNAG00000003780 ENSNNAG00000003769 ENSNNAG00000003756 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003728 ENSNNAG00000003711 ENSNNAG00000003701 ##22 ENSNNAG00000003685 ENSNNAG00000003672 ENSNNAG00000003631 ENSNNAG00000003609 ENSNNAG00000003592 ENSNNAG00000017124 ENSNNAG00000017121 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017105 ##22 SMG9 (ENSNNAG00000017093) ENSNNAG00000017076 ENSNNAG00000017070 Lizard MODERN SPECIES 805 CCDC9 (ENSACAG00000004076) ENSACAG00000004107 DHX34 (ENSACAG00000004112) ENSACAG00000036557 ENSACAG00000040686 ENSACAG00000004176 ENSACAG00000029593 XRCC1 (ENSACAG00000004188) ENSACAG00000004321 PHLDB3 (ENSACAG00000004358) ENSACAG00000004373 ENSACAG00000004379 ENSACAG00000004396 ENSACAG00000039542 ENSACAG00000028324 ENSACAG00000039812 ##22 ENSACAG00000004426 ENSACAG00000004429 ENSACAG00000004431 ENSACAG00000044918 ENSACAG00000040345 ENSACAG00000038431 ENSACAG00000004433 ENSACAG00000004436 ENSACAG00000004441 ENSACAG00000035908 ENSACAG00000028902 ENSACAG00000029510 ENSACAG00000036617 ##22 ENSACAG00000037309 ##22 ENSACAG00000035181 ##22 Archelosauria ANCESTRAL SPECIES 48 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00940000162297.h ENSGT00390000013102.f ENSGT00940000161223 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395 Cryptodira ANCESTRAL SPECIES 68 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00390000013102.e.b ENSGT00940000161223 ENSGT00950000185295 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.c.a Testudinoidea ANCESTRAL SPECIES 73 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000172339 ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Emydidae ANCESTRAL SPECIES 115 ENSGT00960000190411 ENSGT00730000111407 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 painted turtle MODERN SPECIES 1075 ENSCPBG00000013141 ZNF576 (ENSCPBG00000013139) ENSCPBG00000013137 ##22 ENSCPBG00000013135 ##22 ENSCPBG00000013132 ENSCPBG00000013130 XRCC1 (ENSCPBG00000013125) ETHE1 (ENSCPBG00000013116) ENSCPBG00000013107 ENSCPBG00000013103 ENSCPBG00000013101 ENSCPBG00000013099 LYPD3 (ENSCPBG00000013098) ENSCPBG00000013096 ENSCPBG00000013092 ENSCPBG00000013089 ##22 ENSCPBG00000013088 Three-toed box turtle MODERN SPECIES 315 XRCC1 (ENSTMTG00000018243) ENSTMTG00000018277 ENSTMTG00000018293 LYPD3 (ENSTMTG00000018424) ENSTMTG00000018445 ENSTMTG00000018462 ENSTMTG00000018498 ##22 ENSTMTG00000018506 ENSTMTG00000018517 ENSTMTG00000018534 Testudinidae ANCESTRAL SPECIES 85 ENSGT00940000154265.ac.a.c ENSGT00940000154265.bc.a.a.b.b ENSGT00960000190411 ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000159046.C ENSGT00940000172339 ENSGT00940000160803.l ENSGT01020000230438.B.a.a ENSGT01020000230438.B.b.b.a.i.b ENSGT00940000153599.B.a ENSGT01010000227549 ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005017282 ENSGEVG00005017264 ##22 ENSGEVG00005017257 ENSGEVG00005017252 ##22 XRCC1 (ENSGEVG00005017222) ENSGEVG00005017202 ETHE1 (ENSGEVG00005017180) ENSGEVG00005017155 ENSGEVG00005017130 ENSGEVG00005017110 ENSGEVG00005017101 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017046 ENSGEVG00005017031 ENSGEVG00005016995 ENSGEVG00005016973 ##22 ENSGEVG00005016958 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 Coelacanth MODERN SPECIES 1184 ENSLACG00000011935 ENSLACG00000011435 ENSLACG00000011071 ENSLACG00000010543 samhd1 (ENSLACG00000010024) ENSLACG00000009914 ENSLACG00000009424 samhd1 (ENSLACG00000009199) ENSLACG00000008137 ENSLACG00000007842 ENSLACG00000006714 ENSLACG00000006085 ENSLACG00000005910 ##22 ENSLACG00000005411 ##22 ENSLACG00000004370 ##22 ENSLACG00000002961 ##22 ENSLACG00000000467 Actinopterygii ANCESTRAL SPECIES 127 ENSGT00940000166159 ENSGT00940000160297 ENSGT00390000013276 ENSGT00940000160272 ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00980000198998 ENSGT00940000159510 ENSGT00940000160603 ENSGT00940000155418.a.b.b ENSGT00530000063252.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000163304 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00940000166443 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000164072 ENSGT01020000230346.D ENSGT00950000183058.B ENSGT00530000063991.b.a ENSGT01100000263535.a.b ENSGT01020000230438.B.a.a ENSGT00950000183066.a.a.a Neopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.a.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00940000160603 ENSGT00940000155418.a.b.b ENSGT00530000063252.b ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01030000234968 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT00940000163304 ENSGT01100000263586 ENSGT00940000166443.d.a ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT01100000263533.b.a.a.b ENSGT01100000263519.E.b.b ENSGT00940000162287.B ENSGT00940000154446.b.b.b ENSGT00390000009726 Clupeocephala ANCESTRAL SPECIES ENSGT00530000063252.b ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01100000263535.b.a.a.a.a.c.a ENSGT01100000263535.b.a.a.a.b.a ENSGT01100000263535.b.a.a.a.b.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00390000003568 ENSGT00940000163304 ENSGT01100000263586 ENSGT01030000235814 ENSGT00950000182904.a.a.b ENSGT00940000180961 ENSGT00950000182952.E ENSGT00940000170150 ENSGT00390000010337.A ENSGT01050000244883.A.a.b ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT00940000162287.C ENSGT00940000164700.A Otomorpha ANCESTRAL SPECIES 859 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 Otophysi ANCESTRAL SPECIES 667 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 Characiphysae ANCESTRAL SPECIES 9 ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 Channel catfish MODERN SPECIES 22 rab1ab (ENSIPUG00000020508) zgc:153169 (ENSIPUG00000020487) pdcd2 (ENSIPUG00000020454) tbp (ENSIPUG00000020466) rhoua (ENSIPUG00000020445) rab4a (ENSIPUG00000020406) ccsapb (ENSIPUG00000020398) ACT2 (ENSIPUG00000020381) abcb10 (ENSIPUG00000020341) urb2 (ENSIPUG00000020315) ENSIPUG00000020296 ENSIPUG00000020275 DTX4 (ENSIPUG00000020192) ENSIPUG00000020164 FRMD6 (ENSIPUG00000020133) ENSIPUG00000020125 ##22 ENSIPUG00000020118 ENSIPUG00000020111 ENSIPUG00000020099 ENSIPUG00000019892 #22 IRGC (ENSIPUG00000019872) #22 ENSIPUG00000019864 #22 tmx1 (ENSIPUG00000019849) TRIM9 (ENSIPUG00000019785) Pygl (ENSIPUG00000019705) nin (ENSIPUG00000019650) sav1 (ENSIPUG00000019636) ATL1 (ENSIPUG00000019583) map4k5 (ENSIPUG00000019520) cdkl1 (ENSIPUG00000019505) ATP5S (ENSIPUG00000019488) Characiphysae_b ANCESTRAL SPECIES 29 ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 Characoidei ANCESTRAL SPECIES 19 ENSGT00940000157081 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00940000157474 ENSGT00940000156603 ENSGT00940000156644.e.b ENSGT00940000157464 ENSGT00390000003512.q ENSGT00940000156048.e.b.a ENSGT00940000157680 ENSGT00390000009258 ENSGT00940000174741.A ENSGT00740000116854.a ENSGT00980000199379.a ENSGT00940000155517 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00940000155959 ENSGT00940000154071.A.h ENSGT00950000183148.a ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a ENSGT00940000156502 ENSGT00940000164764.j.a ENSGT00940000157908.g ENSGT00400000022158.a.c ENSGT00390000016042 ENSGT00600000084626 Red-bellied piranha MODERN SPECIES 45 pdcd2 (ENSPNAG00000013812) rhoua (ENSPNAG00000006537) rab4a (ENSPNAG00000002943) ccsapb (ENSPNAG00000004812) acta1b (ENSPNAG00000013766) ABCB10 (ENSPNAG00000002919) urb2 (ENSPNAG00000013684) ENSPNAG00000002880 ENSPNAG00000013646 ENSPNAG00000013639 ENSPNAG00000013603 ENSPNAG00000002830 ENSPNAG00000013563 ENSPNAG00000013540 frmd6 (ENSPNAG00000002800) ENSPNAG00000013489 ##22 irgf1 (ENSPNAG00000002770) #22 tmx1 (ENSPNAG00000013470) trim9 (ENSPNAG00000013466) pygl (ENSPNAG00000013405) NIN (ENSPNAG00000013309) sav1 (ENSPNAG00000002640) atl1 (ENSPNAG00000002623) map4k5 (ENSPNAG00000013153) cdkl1 (ENSPNAG00000002502) dmac2l (ENSPNAG00000012970) klc4 (ENSPNAG00000002482) PTK7 (ENSPNAG00000012880) srfb (ENSPNAG00000002394) tmem254 (ENSPNAG00000012736) ENSPNAG00000002368 Mexicana tetra MODERN SPECIES 17 rhoua (ENSAMXG00000042903) rab4a (ENSAMXG00000003534) ccsapb (ENSAMXG00000034109) acta1b (ENSAMXG00000030355) ABCB10 (ENSAMXG00000003488) urb2 (ENSAMXG00000003474) ENSAMXG00000034488 ENSAMXG00000003471 ENSAMXG00000033983 ENSAMXG00000039028 ENSAMXG00000003437 frmd6 (ENSAMXG00000029589) ENSAMXG00000003336 #22 ENSAMXG00000003370 #22 ENSAMXG00000034005 ENSAMXG00000003353 ##22 ENSAMXG00000041738 #22 tmx1 (ENSAMXG00000031685) trim9 (ENSAMXG00000041762) pygl (ENSAMXG00000003277) NIN (ENSAMXG00000003264) sav1 (ENSAMXG00000003247) atl1 (ENSAMXG00000003230) map4k5 (ENSAMXG00000003211) cdkl1 (ENSAMXG00000003187) dmac2l (ENSAMXG00000034511) ENSAMXG00000003156 PTK7 (ENSAMXG00000003135) srfb (ENSAMXG00000036408) tmem254 (ENSAMXG00000029400) ENSAMXG00000003097 Electric eel MODERN SPECIES 343 ENSEEEG00000016463 urb2 (ENSEEEG00000016462) ENSEEEG00000016460 ENSEEEG00000016458 frmd6 (ENSEEEG00000016456) ENSEEEG00000016454 ##22 irgf1 (ENSEEEG00000016453) #22 tmx1 (ENSEEEG00000016451) trim9 (ENSEEEG00000016450) pygl (ENSEEEG00000013848) sav1 (ENSEEEG00000013319) atl1 (ENSEEEG00000013295) map4k5 (ENSEEEG00000013251) dmac2l (ENSEEEG00000013246) ENSEEEG00000013143 ENSEEEG00000013123 ENSEEEG00000013122 ENSEEEG00000013119 gfm1 (ENSEEEG00000012450) lxn (ENSEEEG00000012438) MFSD1 (ENSEEEG00000012431) Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT01030000235141 ENSGT00940000154616.b ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01100000263535.b.a.a.a.a.c.a ENSGT01100000263586 ENSGT00940000163304 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f #22 ENSGT00390000003568 ENSGT00940000164700.B ENSGT00950000182904.a.a.b ENSGT00940000180961 ENSGT00950000182952.E ENSGT00940000170150 ENSGT00390000010337.A ENSGT01050000244883.A.a.b ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT00940000162287.C ENSGT00940000164700.A ENSGT01050000244883.A.a.a.b ENSGT00990000203729 Protacanthopterygii ANCESTRAL SPECIES 514 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b.f.g #22 Northern pike MODERN SPECIES 15 ENSELUG00000026538 ENSELUG00000030152 ENSELUG00000004187 rab20 (ENSELUG00000004092) naxd (ENSELUG00000004084) ing1 (ENSELUG00000029885) ankrd10b (ENSELUG00000004002) ENSELUG00000031442 ENSELUG00000003940 ADAMTS16 (ENSELUG00000003956) irx1a (ENSELUG00000003928) ENSELUG00000026048 ENSELUG00000031605 irx2a (ENSELUG00000003905) ENSELUG00000003885 IRGC (ENSELUG00000031960) ##22 irgf1 (ENSELUG00000003864) #22 mc2r (ENSELUG00000003832) mc5rb (ENSELUG00000003825) fam210ab (ENSELUG00000003811) ldlrad4b (ENSELUG00000003793) CEP192 (ENSELUG00000003767) SEH1L (ENSELUG00000003728) ptpn2a (ENSELUG00000003708) cep76 (ENSELUG00000003693) id4 (ENSELUG00000032505) ncalda (ENSELUG00000003663) grhl2a (ENSELUG00000003646) ENSELUG00000003632 pabpc1a (ENSELUG00000003614) ENSELUG00000003588 Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000155418.a.b.b ENSGT00530000063252.b ENSGT00940000154616.b ENSGT01080000257365.b.a.a.a ENSGT00390000005702 ENSGT00940000163756.c.b ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000001986 ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000154494.a ENSGT00950000183206.a.b.a.b ENSGT00940000166417 ENSGT01030000234968 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.b #22 ENSGT00390000003568 ENSGT01030000235814 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A ENSGT00940000166443.d.b ENSGT01100000263533.b.a.a.b ENSGT00940000162287.C ENSGT01100000263505.b.b.a.a.a.b ENSGT01050000244883.A.a.a.b ENSGT00990000203729 ENSGT01030000234576.D.a.a.b.a.a.a.b ENSGT01100000263533.b.a.b Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 41 ENSSFOG00015026058 ENSSFOG00015030241 ENSSFOG00015032294 ##22 ENSSFOG00015026489 ENSSFOG00015024794 ENSSFOG00015032198 ENSSFOG00015024324 ENSSFOG00015032287 ENSSFOG00015029444 ENSSFOG00015001464 GBP1 (ENSSFOG00015001453) ENSSFOG00015017179 ENSSFOG00015026351 ENSSFOG00015030314 ENSSFOG00015026176 ##22 ENSSFOG00015029798 ENSSFOG00015027592 ENSSFOG00015026032 ENSSFOG00015033302 ENSSFOG00015031426 ##22 ENSSFOG00015032648 Asian bonytongue MODERN SPECIES 41 ENSSFOG00015024794 ENSSFOG00015032198 ENSSFOG00015024324 ENSSFOG00015032287 ENSSFOG00015029444 ENSSFOG00015001464 GBP1 (ENSSFOG00015001453) ENSSFOG00015017179 ENSSFOG00015026351 ENSSFOG00015030314 ENSSFOG00015026176 ##22 ENSSFOG00015029798 ENSSFOG00015027592 ENSSFOG00015026032 ENSSFOG00015033302 ENSSFOG00015031426 ##22 ENSSFOG00015032648 Asian bonytongue MODERN SPECIES 41 ENSSFOG00015026058 ENSSFOG00015030241 ENSSFOG00015032294 ##22 ENSSFOG00015026489 ENSSFOG00015024794 ENSSFOG00015032198 ENSSFOG00015024324 ENSSFOG00015032287 ENSSFOG00015029444 ENSSFOG00015001464 GBP1 (ENSSFOG00015001453) ENSSFOG00015017179 ENSSFOG00015026351 ENSSFOG00015030314 ENSSFOG00015026176 ##22 ENSSFOG00015029798 ENSSFOG00015027592 ENSSFOG00015026032 Asian bonytongue MODERN SPECIES 9 hsc70 (ENSSFOG00015001771) ENSSFOG00015001729 ENSSFOG00015001664 ENSSFOG00015001603 ENSSFOG00015001578 ENSSFOG00015001546 ENSSFOG00015025393 GBP1 (ENSSFOG00015028763) ENSSFOG00015025390 ENSSFOG00015023347 ENSSFOG00015025944 ENSSFOG00015029320 ENSSFOG00015025364 ENSSFOG00015029371 ENSSFOG00015033131 ENSSFOG00015028461 ##22 ENSSFOG00015029346 ENSSFOG00015023339 #22 ENSSFOG00015028014 #22 ENSSFOG00015031478 ENSSFOG00015016894 ENSSFOG00015032396 ENSSFOG00015033037 IRGC (ENSSFOG00015016945) ##22 ENSSFOG00015025789 #22 SMG9 (ENSSFOG00015016961) KCNN4 (ENSSFOG00015017046) ENSSFOG00015025995 ENSSFOG00015026654 has1 (ENSSFOG00015017091) ENSSFOG00015017119 Asian bonytongue MODERN SPECIES 9 ENSSFOG00015025390 ENSSFOG00015023347 ENSSFOG00015025944 ENSSFOG00015029320 ENSSFOG00015025364 ENSSFOG00015029371 ENSSFOG00015033131 ENSSFOG00015028461 ##22 ENSSFOG00015029346 ENSSFOG00015023339 #22 ENSSFOG00015028014 #22 ENSSFOG00015031478 ENSSFOG00015016894 ENSSFOG00015032396 ENSSFOG00015033037 IRGC (ENSSFOG00015016945) ##22 ENSSFOG00015025789 #22 SMG9 (ENSSFOG00015016961) KCNN4 (ENSSFOG00015017046) ENSSFOG00015025995 ENSSFOG00015026654 has1 (ENSSFOG00015017091) ENSSFOG00015017119 ENSSFOG00015017126 ENSSFOG00015026250 ENSSFOG00015024614 prss1 (ENSSFOG00015017329) ENSSFOG00015019352 ENSSFOG00015028811 ENSSFOG00015024865 zgc:92590 (ENSSFOG00015019387) P. kingsleyae DUPLICATION P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 768 GBP2 (ENSPKIG00000020651) ENSPKIG00000020676 ENSPKIG00000020699 #22 IRGC (ENSPKIG00000020715) ##22 P. kingsleyae MODERN SPECIES 299 mef2cb (ENSPKIG00000001957) ccnh (ENSPKIG00000001858) RASA1 (ENSPKIG00000001782) cox7c (ENSPKIG00000001757) ENSPKIG00000001746 IRGC (ENSPKIG00000001724) ##22 SMG9 (ENSPKIG00000001651) ENSPKIG00000001626 KCNN4 (ENSPKIG00000001589) ENSPKIG00000001563 has1 (ENSPKIG00000001542) ENSPKIG00000001527 ENSPKIG00000001517 ENSPKIG00000001511 ENSPKIG00000001492 ENSPKIG00000001471 ENSPKIG00000001458 ENSPKIG00000001437 ENSPKIG00000001414 ENSPKIG00000001393 ENSPKIG00000001323 P. kingsleyae MODERN SPECIES 18 timp2b (ENSPKIG00000012987) sfxn2 (ENSPKIG00000012936) arl3b (ENSPKIG00000012886) TRIM8 (ENSPKIG00000012827) mfsd13a (ENSPKIG00000012741) ENSPKIG00000012715 SEMA4G (ENSPKIG00000012691) mrpl43 (ENSPKIG00000012675) twnk (ENSPKIG00000012661) LZTS2 (ENSPKIG00000012642) ENSPKIG00000012602 ENSPKIG00000012584 sfxn3 (ENSPKIG00000012573) ENSPKIG00000012539 #22 ENSPKIG00000012507 #22 ENSPKIG00000012481 ##22 SMG9 (ENSPKIG00000012446) ENSPKIG00000012422 ENSPKIG00000012405 ENSPKIG00000012389 mat1a (ENSPKIG00000012357) zgc:154058 (ENSPKIG00000012318) zgc:92749 (ENSPKIG00000012292) ENSPKIG00000012233 nfkb2 (ENSPKIG00000012183) ENSPKIG00000012160 ENSPKIG00000012133 glud1b (ENSPKIG00000012074) sncgb (ENSPKIG00000011985) bmpr1ab (ENSPKIG00000011886) ldb3b (ENSPKIG00000011805) Reedfish MODERN SPECIES 8 ENSECRG00000017758 APLP1 (ENSECRG00000017714) ENSECRG00000017683 ENSECRG00000017610 ENSECRG00000017529 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 Euteleostomi ANCESTRAL SPECIES 1431 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.a.a.b ##22 Sarcopterygii ANCESTRAL SPECIES 855 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183007.a.a.b ##22 ENSGT00950000183007.b.i.a.b ##22 Tetrapoda ANCESTRAL SPECIES 631 ENSGT00950000183007.a.a.b ##22 ENSGT00950000183007.b.i.a.b ##22 Amniota ANCESTRAL SPECIES 76 ENSGT00940000162297 ENSGT00940000154265 ENSGT00940000156840 ENSGT01030000234555.a.a.b.b ENSGT00390000013102.f ENSGT00940000161223 ENSGT00730000111407 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A.a.a ENSGT01020000230438.B.b.b.a ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D ENSGT00940000160467 ENSGT00940000167735 ENSGT00390000009936 ENSGT01050000244814.a.a.b.b.a.a ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01100000263573.a.a.a Mammalia ANCESTRAL SPECIES 118 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT01100000263479.H ENSGT01100000263479.D.a ENSGT01100000263479.E ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000011584 ENSGT00390000007913 Theria ANCESTRAL SPECIES 27 ENSGT00940000154363.A ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT01100000263479.H ENSGT01100000263479.D.a ENSGT01100000263479.E.h ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000011584 Eutheria ANCESTRAL SPECIES 29 ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000163513 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b Atlantogenata ANCESTRAL SPECIES 126 ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b Afrotheria ANCESTRAL SPECIES 22 ENSGT00940000161202.b ENSGT00730000111056 ENSGT00390000002861 ENSGT01100000263479.D.a ENSGT00530000063351.a.a ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162119.b.a.a ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000011584 ENSGT00390000015914 Afrotheria_a ANCESTRAL SPECIES 21 ENSGT00940000161202.b ENSGT00730000111056 ENSGT00390000002861 ENSGT01100000263479.D.a ENSGT00530000063351.a.a ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162119.b.a.a ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000011584 ENSGT00390000015914 Elephant MODERN SPECIES 375 ENSLAFG00000030722 ENSLAFG00000031988 ENSLAFG00000022948 ENSLAFG00000022288 ENSLAFG00000028257 LYPD3 (ENSLAFG00000031996) PHLDB3 (ENSLAFG00000030277) ETHE1 (ENSLAFG00000012685) ZNF575 (ENSLAFG00000016599) XRCC1 (ENSLAFG00000012690) PINLYP (ENSLAFG00000012692) IRGQ (ENSLAFG00000012701) ZNF428 (ENSLAFG00000012706) CADM4 (ENSLAFG00000012709) PLAUR (ENSLAFG00000004838) IRGC (ENSLAFG00000003034) ##22 SMG9 (ENSLAFG00000003035) KCNN4 (ENSLAFG00000000986) LYPD5 (ENSLAFG00000028899) ENSLAFG00000014451 ENSLAFG00000000966 ENSLAFG00000030057 ENSLAFG00000031582 ENSLAFG00000029340 ENSLAFG00000011332 ENSLAFG00000028546 ENSLAFG00000028037 ZNF235 (ENSLAFG00000011186) ENSLAFG00000029192 ENSLAFG00000016851 ENSLAFG00000010661 Hyrax MODERN SPECIES 1866 IFGGE (ENSPCAG00000010807) ##22 SMG9 (ENSPCAG00000010819) Xenarthra ANCESTRAL SPECIES 152 ENSGT00390000013102.e.b ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 Armadillo MODERN SPECIES 1695 DMRTC2 (ENSDNOG00000045333) LYPD4 (ENSDNOG00000032652) ENSDNOG00000017532 LYPD3 (ENSDNOG00000004565) PHLDB3 (ENSDNOG00000031610) ENSDNOG00000010239 ZNF575 (ENSDNOG00000040867) XRCC1 (ENSDNOG00000010698) PINLYP (ENSDNOG00000010730) IRGQ (ENSDNOG00000010754) ZNF428 (ENSDNOG00000045382) ENSDNOG00000033886 CADM4 (ENSDNOG00000024446) PLAUR (ENSDNOG00000002532) ENSDNOG00000044272 IRGC (ENSDNOG00000036801) ##22 SMG9 (ENSDNOG00000002535) Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 Primates ANCESTRAL SPECIES 15 ENSGT00730000111056 ENSGT00390000002861 ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B.a ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 ENSGT00940000163580 Strepsirrhini ANCESTRAL SPECIES 16 ENSGT01100000263479.D.a.c.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000160225.B.b.c ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Lemuriformes ANCESTRAL SPECIES 15 ENSGT01100000263479.D.a.c.b ENSGT00530000063351.a.a.w ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A.c.a ENSGT00940000160225.B.b.c ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Lemuriformes_a ANCESTRAL SPECIES 5 ENSGT01100000263479.D.a.c.b.j.a ENSGT00530000063351.a.a.w ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A.c.a.a ENSGT00940000160225.A.c.b ENSGT00940000160225.A.c.a.b ENSGT00940000160225.B.b.c ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 Greater bamboo lemur MODERN SPECIES 162 TEX101 (ENSPSMG00000011860) LYPD3 (ENSPSMG00000011853) PHLDB3 (ENSPSMG00000011835) ETHE1 (ENSPSMG00000011808) XRCC1 (ENSPSMG00000011717) ENSPSMG00000011586 IRGQ (ENSPSMG00000011569) ZNF576 (ENSPSMG00000011558) ZNF428 (ENSPSMG00000011551) ENSPSMG00000011545 CADM4 (ENSPSMG00000011541) PLAUR (ENSPSMG00000011479) IRGC (ENSPSMG00000011429) ##22 SMG9 (ENSPSMG00000011425) KCNN4 (ENSPSMG00000011397) LYPD5 (ENSPSMG00000011373) ENSPSMG00000011367 ZNF404 (ENSPSMG00000011347) ZNF45 (ENSPSMG00000011339) ENSPSMG00000011333 ENSPSMG00000011325 ENSPSMG00000011283 ENSPSMG00000011274 ENSPSMG00000011262 ENSPSMG00000011245 ENSPSMG00000011244 ZNF234 (ENSPSMG00000011237) ZNF226 (ENSPSMG00000011208) Bushbaby MODERN SPECIES 267 LIPE (ENSOGAG00000013637) ENSOGAG00000002909 CD177 (ENSOGAG00000010373) TEX101 (ENSOGAG00000009279) LYPD3 (ENSOGAG00000009282) PHLDB3 (ENSOGAG00000031884) ETHE1 (ENSOGAG00000009504) ZNF575 (ENSOGAG00000027522) XRCC1 (ENSOGAG00000009506) PINLYP (ENSOGAG00000009513) IRGQ (ENSOGAG00000009518) ZNF576 (ENSOGAG00000009521) ZNF428 (ENSOGAG00000032122) CADM4 (ENSOGAG00000012684) PLAUR (ENSOGAG00000031748) IRGC (ENSOGAG00000026833) ##22 SMG9 (ENSOGAG00000012690) KCNN4 (ENSOGAG00000006782) LYPD5 (ENSOGAG00000009950) ENSOGAG00000032330 ENSOGAG00000012069 ENSOGAG00000030378 ENSOGAG00000015980 ZNF227 (ENSOGAG00000028740) ZNF233 (ENSOGAG00000001912) ENSOGAG00000001907 ZNF229 (ENSOGAG00000034415) ZNF180 (ENSOGAG00000006831) ENSOGAG00000027646 PVR (ENSOGAG00000006835) CEACAM16 (ENSOGAG00000028733) Haplorrhini ANCESTRAL SPECIES 16 ENSGT00730000111056 ENSGT00390000002861 ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B.a ENSGT00940000160225.B.b ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 Simiiformes ANCESTRAL SPECIES 16 ENSGT01100000263479.D.a.c.a.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000164111 ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 Catarrhini ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.a.b.c ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Cercopithecidae ANCESTRAL SPECIES 12 ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT01100000263479.D.a.c.a.a.a.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT01100000263479.D.a.c.a.b.c.a.b.b.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Macaca ANCESTRAL SPECIES 12 ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.b.b ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 Macaca_a ANCESTRAL SPECIES 1 ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.b.b ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000160225.B.a ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Rhesus MODERN SPECIES 10 ENSMMUG00000055813 ENSMMUG00000047533 CD177 (ENSMMUG00000021062) TEX101 (ENSMMUG00000003568) LYPD3 (ENSMMUG00000054323) PHLDB3 (ENSMMUG00000044157) ETHE1 (ENSMMUG00000019264) ZNF575 (ENSMMUG00000019265) XRCC1 (ENSMMUG00000004467) PINLYP (ENSMMUG00000042645) IRGQ (ENSMMUG00000004468) ZNF576 (ENSMMUG00000054126) ZNF428 (ENSMMUG00000053175) CADM4 (ENSMMUG00000004615) PLAUR (ENSMMUG00000004616) IRGC (ENSMMUG00000044697) ##22 SMG9 (ENSMMUG00000014543) KCNN4 (ENSMMUG00000021267) LYPD5 (ENSMMUG00000059642) ZNF283 (ENSMMUG00000028753) ZNF45 (ENSMMUG00000021474) ZNF221 (ENSMMUG00000064975) ZNF230 (ENSMMUG00000028751) ZNF222 (ENSMMUG00000056925) ENSMMUG00000064373 ZNF226 (ENSMMUG00000047704) ZNF224 (ENSMMUG00000021469) ZNF227 (ENSMMUG00000012793) ENSMMUG00000057612 ZNF233 (ENSMMUG00000012797) ZNF235 (ENSMMUG00000012801) Crab-eating macaque MODERN SPECIES 10 ENSMFAG00000047918 ENSMFAG00000043957 ENSMFAG00000061203 ENSMFAG00000042985 ENSMFAG00000052509 TEX101 (ENSMFAG00000036434) LYPD3 (ENSMFAG00000049368) PHLDB3 (ENSMFAG00000033373) XRCC1 (ENSMFAG00000040166) ZNF575 (ENSMFAG00000061397) PINLYP (ENSMFAG00000030734) ZNF576 (ENSMFAG00000065199) ZNF428 (ENSMFAG00000034659) CADM4 (ENSMFAG00000030356) PLAUR (ENSMFAG00000044138) IRGC (ENSMFAG00000023642) ##22 SMG9 (ENSMFAG00000040840) KCNN4 (ENSMFAG00000038433) LYPD5 (ENSMFAG00000042979) ZNF283 (ENSMFAG00000033922) ZNF45 (ENSMFAG00000050265) ZNF155 (ENSMFAG00000038456) ZNF224 (ENSMFAG00000056011) ENSMFAG00000058488 ZNF226 (ENSMFAG00000029891) ZNF227 (ENSMFAG00000036737) ENSMFAG00000059387 ENSMFAG00000039215 ZNF112 (ENSMFAG00000035923) ENSMFAG00000047875 ZNF285 (ENSMFAG00000002959) Pig-tailed macaque MODERN SPECIES 315 ENSMNEG00000005476 ENSMNEG00000030992 CD177 (ENSMNEG00000028119) TEX101 (ENSMNEG00000043326) LYPD3 (ENSMNEG00000035496) PHLDB3 (ENSMNEG00000029912) ETHE1 (ENSMNEG00000039250) ZNF575 (ENSMNEG00000007241) XRCC1 (ENSMNEG00000034449) PINLYP (ENSMNEG00000005488) IRGQ (ENSMNEG00000035490) ZNF576 (ENSMNEG00000031191) ZNF428 (ENSMNEG00000041660) CADM4 (ENSMNEG00000043063) PLAUR (ENSMNEG00000028833) IRGC (ENSMNEG00000037728) ##22 SMG9 (ENSMNEG00000043195) KCNN4 (ENSMNEG00000036919) LYPD5 (ENSMNEG00000032742) ZNF283 (ENSMNEG00000042718) ZNF45 (ENSMNEG00000038456) ZNF221 (ENSMNEG00000032545) ZNF155 (ENSMNEG00000045437) ZNF230 (ENSMNEG00000039969) ZNF224 (ENSMNEG00000029576) ZNF225 (ENSMNEG00000028745) ZNF234 (ENSMNEG00000031698) ZNF226 (ENSMNEG00000041738) ZNF227 (ENSMNEG00000011871) ENSMNEG00000029625 ZNF235 (ENSMNEG00000028194) Cercopithecinae_b ANCESTRAL SPECIES 24 ENSGT01100000263479.D.a.c.a.a.a.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Cercopithecinae_d ANCESTRAL SPECIES 138 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Drill MODERN SPECIES 1244 ENSMLEG00000032103 CD177 (ENSMLEG00000029031) TEX101 (ENSMLEG00000031219) LYPD3 (ENSMLEG00000007561) PHLDB3 (ENSMLEG00000018589) ENSMLEG00000030643 ZNF575 (ENSMLEG00000043397) XRCC1 (ENSMLEG00000039848) PINLYP (ENSMLEG00000027883) IRGQ (ENSMLEG00000035628) ZNF576 (ENSMLEG00000010590) ZNF428 (ENSMLEG00000031228) SRRM5 (ENSMLEG00000032389) CADM4 (ENSMLEG00000036671) PLAUR (ENSMLEG00000023071) IRGC (ENSMLEG00000012396) ##22 SMG9 (ENSMLEG00000034771) KCNN4 (ENSMLEG00000034052) LYPD5 (ENSMLEG00000029774) ZNF283 (ENSMLEG00000036129) ZNF404 (ENSMLEG00000037401) ZNF45 (ENSMLEG00000043843) ZNF221 (ENSMLEG00000041904) ZNF155 (ENSMLEG00000041516) ZNF230 (ENSMLEG00000029649) ZNF222 (ENSMLEG00000036084) ZNF223 (ENSMLEG00000029534) ZNF284 (ENSMLEG00000040164) ZNF224 (ENSMLEG00000011181) ZNF225 (ENSMLEG00000038695) ZNF234 (ENSMLEG00000040534) Sooty mangabey MODERN SPECIES 376 ENSCATG00000036179 CD177 (ENSCATG00000039741) TEX101 (ENSCATG00000032187) LYPD3 (ENSCATG00000036703) PHLDB3 (ENSCATG00000031906) ETHE1 (ENSCATG00000029420) ZNF575 (ENSCATG00000020658) XRCC1 (ENSCATG00000039431) PINLYP (ENSCATG00000021659) IRGQ (ENSCATG00000030598) ZNF576 (ENSCATG00000034385) SRRM5 (ENSCATG00000029305) ZNF428 (ENSCATG00000016415) CADM4 (ENSCATG00000032619) PLAUR (ENSCATG00000038712) IRGC (ENSCATG00000016103) ##22 SMG9 (ENSCATG00000002831) KCNN4 (ENSCATG00000011141) LYPD5 (ENSCATG00000033827) ZNF283 (ENSCATG00000023178) ZNF45 (ENSCATG00000036397) ZNF221 (ENSCATG00000040058) ZNF284 (ENSCATG00000032408) ZNF224 (ENSCATG00000037434) ZNF225 (ENSCATG00000035998) ZNF234 (ENSCATG00000036642) ZNF226 (ENSCATG00000035865) ZNF227 (ENSCATG00000041579) ZNF233 (ENSCATG00000015076) ZNF235 (ENSCATG00000029278) ZNF285 (ENSCATG00000030629) Olive baboon MODERN SPECIES 12 ENSPANG00000003143 CD177 (ENSPANG00000002968) TEX101 (ENSPANG00000007650) LYPD3 (ENSPANG00000026276) ENSPANG00000038859 ETHE1 (ENSPANG00000013980) ZNF575 (ENSPANG00000049268) XRCC1 (ENSPANG00000022719) PINLYP (ENSPANG00000020938) IRGQ (ENSPANG00000011862) ZNF576 (ENSPANG00000012947) SRRM5 (ENSPANG00000046795) ZNF428 (ENSPANG00000005273) CADM4 (ENSPANG00000008093) PLAUR (ENSPANG00000014600) IRGC (ENSPANG00000006955) ##22 SMG9 (ENSPANG00000005272) KCNN4 (ENSPANG00000011861) LYPD5 (ENSPANG00000040515) ZNF283 (ENSPANG00000008804) ZNF45 (ENSPANG00000019290) ZNF221 (ENSPANG00000031903) ZNF155 (ENSPANG00000007220) ZNF224 (ENSPANG00000035562) ZNF234 (ENSPANG00000011697) ZNF226 (ENSPANG00000031282) ENSPANG00000013860 ENSPANG00000010670 ENSPANG00000006495 ENSPANG00000031231 ENSPANG00000047717 Vervet Monkey MODERN SPECIES 25 CD177 (ENSCSAG00000003420) TEX101 (ENSCSAG00000003415) LYPD3 (ENSCSAG00000003412) ENSCSAG00000003408 ETHE1 (ENSCSAG00000003404) ZNF575 (ENSCSAG00000003403) XRCC1 (ENSCSAG00000003402) PINLYP (ENSCSAG00000003398) IRGQ (ENSCSAG00000003396) ZNF576 (ENSCSAG00000003393) ZNF428 (ENSCSAG00000003389) SRRM5 (ENSCSAG00000003384) CADM4 (ENSCSAG00000003382) ENSCSAG00000019620 PLAUR (ENSCSAG00000003374) IRGC (ENSCSAG00000019621) ##22 SMG9 (ENSCSAG00000003363) ENSCSAG00000003359 LYPD5 (ENSCSAG00000003357) ZNF283 (ENSCSAG00000003353) ZNF45 (ENSCSAG00000003351) ZNF221 (ENSCSAG00000003349) ZNF155 (ENSCSAG00000003345) ZNF224 (ENSCSAG00000003342) ZNF222 (ENSCSAG00000003338) ZNF284 (ENSCSAG00000003336) ZNF225 (ENSCSAG00000003334) ZNF234 (ENSCSAG00000003333) ZNF226 (ENSCSAG00000003329) ZNF227 (ENSCSAG00000003327) ZNF233 (ENSCSAG00000003326) Rhinopithecus ANCESTRAL SPECIES 159 ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 ENSGT00940000162119 Black snub-nosed monkey MODERN SPECIES 809 ENSRBIG00000041302 CD177 (ENSRBIG00000031603) TEX101 (ENSRBIG00000042715) LYPD3 (ENSRBIG00000044808) PHLDB3 (ENSRBIG00000043422) ETHE1 (ENSRBIG00000007569) ZNF575 (ENSRBIG00000033596) XRCC1 (ENSRBIG00000040637) PINLYP (ENSRBIG00000040825) IRGQ (ENSRBIG00000029671) ZNF576 (ENSRBIG00000034569) SRRM5 (ENSRBIG00000042772) ZNF428 (ENSRBIG00000036144) CADM4 (ENSRBIG00000035972) PLAUR (ENSRBIG00000015014) IRGC (ENSRBIG00000006312) ##22 SMG9 (ENSRBIG00000031448) KCNN4 (ENSRBIG00000031790) LYPD5 (ENSRBIG00000034452) ZNF283 (ENSRBIG00000031756) ZNF404 (ENSRBIG00000035040) ZNF45 (ENSRBIG00000024295) ZNF221 (ENSRBIG00000041745) ZNF230 (ENSRBIG00000031768) ZNF155 (ENSRBIG00000013153) ZNF223 (ENSRBIG00000036197) ZNF284 (ENSRBIG00000038918) ZNF224 (ENSRBIG00000027778) ZNF225 (ENSRBIG00000033889) ZNF234 (ENSRBIG00000026634) ZNF226 (ENSRBIG00000040720) Hominoidea ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Hominidae ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.b.a ENSGT00530000063351.a.a.s.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Homo/Pan group ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.b.b ENSGT00530000063351.a.a.t ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Pan ANCESTRAL SPECIES 9 ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.b.d.a ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.b.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000163825.a.b ENSGT00940000164111.b ENSGT00940000164111.a ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 Chimpanzee MODERN SPECIES 10 ENSPTRG00000041975 PSG9 (ENSPTRG00000049328) TEX101 (ENSPTRG00000011078) LYPD3 (ENSPTRG00000011079) PHLDB3 (ENSPTRG00000011080) ETHE1 (ENSPTRG00000011082) ZNF575 (ENSPTRG00000011083) XRCC1 (ENSPTRG00000011084) PINLYP (ENSPTRG00000052742) IRGQ (ENSPTRG00000011087) ZNF576 (ENSPTRG00000049995) ZNF428 (ENSPTRG00000011089) SRRM5 (ENSPTRG00000038834) CADM4 (ENSPTRG00000011090) PLAUR (ENSPTRG00000011091) IRGC (ENSPTRG00000011092) ##22 SMG9 (ENSPTRG00000011093) KCNN4 (ENSPTRG00000011094) LYPD5 (ENSPTRG00000048911) ZNF283 (ENSPTRG00000011096) ZNF404 (ENSPTRG00000011097) ZNF45 (ENSPTRG00000011098) ZNF221 (ENSPTRG00000011099) ZNF155 (ENSPTRG00000028986) ZNF230 (ENSPTRG00000011100) ZNF222 (ENSPTRG00000011102) ZNF223 (ENSPTRG00000011103) ZNF284 (ENSPTRG00000052175) ZNF224 (ENSPTRG00000011105) ZNF234 (ENSPTRG00000011109) ZNF226 (ENSPTRG00000011108) Bonobo MODERN SPECIES 10 ENSPPAG00000040664 ENSPPAG00000030698 PSG4 (ENSPPAG00000040480) TEX101 (ENSPPAG00000031740) LYPD3 (ENSPPAG00000035304) PHLDB3 (ENSPPAG00000028351) ETHE1 (ENSPPAG00000032831) ENSPPAG00000018483 XRCC1 (ENSPPAG00000038532) PINLYP (ENSPPAG00000025276) IRGQ (ENSPPAG00000040059) ZNF576 (ENSPPAG00000028914) ZNF428 (ENSPPAG00000022731) CADM4 (ENSPPAG00000028380) PLAUR (ENSPPAG00000044032) IRGC (ENSPPAG00000022484) ##22 SMG9 (ENSPPAG00000030299) KCNN4 (ENSPPAG00000029555) LYPD5 (ENSPPAG00000030294) ZNF283 (ENSPPAG00000037297) ZNF404 (ENSPPAG00000037187) ZNF45 (ENSPPAG00000004432) ZNF221 (ENSPPAG00000029878) ENSPPAG00000043627 ZNF230 (ENSPPAG00000013305) ZNF222 (ENSPPAG00000036107) ZNF223 (ENSPPAG00000021525) ZNF284 (ENSPPAG00000031107) ZNF224 (ENSPPAG00000028948) ZNF225 (ENSPPAG00000037994) ZNF234 (ENSPPAG00000030412) Human MODERN SPECIES 10 CD177 (ENSG00000204936) TEX101 (ENSG00000131126) LYPD3 (ENSG00000124466) PHLDB3 (ENSG00000176531) ETHE1 (ENSG00000105755) ZNF575 (ENSG00000176472) XRCC1 (ENSG00000073050) ENSG00000268361 PINLYP (ENSG00000234465) IRGQ (ENSG00000167378) ZNF576 (ENSG00000124444) SRRM5 (ENSG00000226763) ZNF428 (ENSG00000131116) CADM4 (ENSG00000105767) PLAUR (ENSG00000011422) IRGC (ENSG00000124449) ##22 SMG9 (ENSG00000105771) KCNN4 (ENSG00000104783) LYPD5 (ENSG00000159871) ZNF283 (ENSG00000167637) ZNF404 (ENSG00000176222) ZNF45 (ENSG00000124459) ZNF221 (ENSG00000159905) ZNF155 (ENSG00000204920) ZNF230 (ENSG00000159882) ZNF222 (ENSG00000159885) ZNF223 (ENSG00000178386) ZNF284 (ENSG00000186026) ZNF224 (ENSG00000267680) ZNF225 (ENSG00000256294) ZNF234 (ENSG00000263002) Gorilla MODERN SPECIES 10 ENSGGOG00000012005 PSG4 (ENSGGOG00000006433) ENSGGOG00000014979 TEX101 (ENSGGOG00000016818) LYPD3 (ENSGGOG00000012961) PHLDB3 (ENSGGOG00000009246) ETHE1 (ENSGGOG00000003960) ENSGGOG00000003958 XRCC1 (ENSGGOG00000002526) PINLYP (ENSGGOG00000002532) IRGQ (ENSGGOG00000009162) ZNF576 (ENSGGOG00000009168) ZNF428 (ENSGGOG00000016413) CADM4 (ENSGGOG00000009172) ENSGGOG00000009182 IRGC (ENSGGOG00000012437) ##22 SMG9 (ENSGGOG00000000428) KCNN4 (ENSGGOG00000005490) LYPD5 (ENSGGOG00000011844) ENSGGOG00000039276 ZNF404 (ENSGGOG00000027747) ZNF221 (ENSGGOG00000006869) ZNF155 (ENSGGOG00000004889) ZNF230 (ENSGGOG00000040539) ZNF222 (ENSGGOG00000006535) ZNF223 (ENSGGOG00000001509) ZNF284 (ENSGGOG00000036892) ZNF224 (ENSGGOG00000006529) ZNF234 (ENSGGOG00000043986) ZNF226 (ENSGGOG00000017030) ZNF227 (ENSGGOG00000008988) Orangutan MODERN SPECIES 10 ENSPPYG00000039425 ENSPPYG00000010055 ENSPPYG00000010056 TEX101 (ENSPPYG00000010057) LYPD3 (ENSPPYG00000010058) ENSPPYG00000010060 ETHE1 (ENSPPYG00000010061) ZNF575 (ENSPPYG00000010062) XRCC1 (ENSPPYG00000010063) PINLYP (ENSPPYG00000010064) IRGQ (ENSPPYG00000010066) ENSPPYG00000039902 ZNF428 (ENSPPYG00000010069) CADM4 (ENSPPYG00000010071) PLAUR (ENSPPYG00000010072) IRGC (ENSPPYG00000010073) ##22 SMG9 (ENSPPYG00000010074) KCNN4 (ENSPPYG00000010075) LYPD5 (ENSPPYG00000010076) ZNF283 (ENSPPYG00000010077) ZNF404 (ENSPPYG00000010078) ZNF45 (ENSPPYG00000010079) ZNF221 (ENSPPYG00000041579) ZNF155 (ENSPPYG00000039251) ZNF230 (ENSPPYG00000029494) ZNF225 (ENSPPYG00000029545) ZNF223 (ENSPPYG00000029821) ZNF224 (ENSPPYG00000010080) ZNF234 (ENSPPYG00000039476) ZNF226 (ENSPPYG00000010084) ZNF227 (ENSPPYG00000010559) Platyrrhini ANCESTRAL SPECIES 20 ENSGT01100000263479.D.a.c.a.b.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000164111 ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 Cebidae ANCESTRAL SPECIES 8 ENSGT01100000263479.D.a.c.a.b.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.a.b ENSGT00940000162545 ENSGT00940000160225.A ENSGT00940000163825.a.a ENSGT00940000164111 ENSGT00940000160225.B.b.b ENSGT00940000160225.B.a ENSGT00940000160225.B.b.a ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 Marmoset MODERN SPECIES 14 ENSCJAG00000054047 ENSCJAG00000013647 TEX101 (ENSCJAG00000013643) LYPD3 (ENSCJAG00000013640) PHLDB3 (ENSCJAG00000013624) ETHE1 (ENSCJAG00000013606) ZNF575 (ENSCJAG00000013599) XRCC1 (ENSCJAG00000013552) PINLYP (ENSCJAG00000013544) IRGQ (ENSCJAG00000013535) ZNF576 (ENSCJAG00000037736) ZNF428 (ENSCJAG00000013510) SRRM5 (ENSCJAG00000013521) CADM4 (ENSCJAG00000013492) PLAUR (ENSCJAG00000013472) IRGC (ENSCJAG00000076565) ##22 SMG9 (ENSCJAG00000013416) KCNN4 (ENSCJAG00000013407) LYPD5 (ENSCJAG00000013397) ZNF283 (ENSCJAG00000032912) ZNF45 (ENSCJAG00000013375) ZNF221 (ENSCJAG00000045153) ZNF155 (ENSCJAG00000046317) ENSCJAG00000071445 ENSCJAG00000040390 ZNF284 (ENSCJAG00000013331) ZNF224 (ENSCJAG00000073033) ZNF225 (ENSCJAG00000048658) ZNF234 (ENSCJAG00000038929) ZNF226 (ENSCJAG00000013321) ENSCJAG00000084044 Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 Glires ANCESTRAL SPECIES 6 ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 Lagomorpha ANCESTRAL SPECIES 160 ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162215 ENSGT00940000162315 ENSGT00940000162848 ENSGT01100000263479.C Pika MODERN SPECIES 799 IRGC (ENSOPRG00000004262) ##22 SMG9 (ENSOPRG00000004274) Rabbit MODERN SPECIES 614 ENSOCUG00000032859 ZNF575 (ENSOCUG00000005382) XRCC1 (ENSOCUG00000005387) ENSOCUG00000005396 ENSOCUG00000005402 ZNF576 (ENSOCUG00000016634) ZNF428 (ENSOCUG00000016620) ENSOCUG00000016625 CADM4 (ENSOCUG00000026547) PLAUR (ENSOCUG00000027400) IRGC (ENSOCUG00000038690) ##22 SMG9 (ENSOCUG00000002786) KCNN4 (ENSOCUG00000006168) ENSOCUG00000033433 ORYCUNV1R1660 (ENSOCUG00000024001) ZNF45 (ENSOCUG00000014634) ENSOCUG00000033935 ENSOCUG00000033696 ENSOCUG00000032730 ZNF112 (ENSOCUG00000017842) ZNF180 (ENSOCUG00000032718) ENSOCUG00000029639 ENSOCUG00000026280 CEACAM16 (ENSOCUG00000024559) Rodentia ANCESTRAL SPECIES 8 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.b ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Rodentia_A ANCESTRAL SPECIES 6 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.b ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Sciuridae ANCESTRAL SPECIES 5 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.b.a ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h Marmotini ANCESTRAL SPECIES 7 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.b.a ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163825 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00960000192303 ENSGT00390000015308 Marmotini_b ANCESTRAL SPECIES 49 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.b.a ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163825 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00960000192303 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C Arctic ground squirrel MODERN SPECIES 297 LYPD4 (ENSUPAG00010021943) ENSUPAG00010021938 ENSUPAG00010021937 TEX101 (ENSUPAG00010021935) LYPD3 (ENSUPAG00010021933) PHLDB3 (ENSUPAG00010021925) ETHE1 (ENSUPAG00010021921) ZNF575 (ENSUPAG00010021917) XRCC1 (ENSUPAG00010021910) PINLYP (ENSUPAG00010021906) IRGQ (ENSUPAG00010021905) ZNF576 (ENSUPAG00010021902) ZNF428 (ENSUPAG00010021901) CADM4 (ENSUPAG00010021899) PLAUR (ENSUPAG00010021881) IRGC (ENSUPAG00010021878) ##22 SMG9 (ENSUPAG00010021877) KCNN4 (ENSUPAG00010021873) LYPD5 (ENSUPAG00010021869) ZNF45 (ENSUPAG00010021867) ZNF226 (ENSUPAG00010021866) ZNF227 (ENSUPAG00010021865) ENSUPAG00010021863 ZNF235 (ENSUPAG00010021860) ZNF112 (ENSUPAG00010021818) ZNF180 (ENSUPAG00010021813) CEACAM20 (ENSUPAG00010021809) ENSUPAG00010021807 ENSUPAG00010021806 ENSUPAG00010021805 CEACAM16 (ENSUPAG00010021804) Squirrel MODERN SPECIES 306 ENSSTOG00000032462 ARHGEF1 (ENSSTOG00000003526) CD79A (ENSSTOG00000003518) ENSSTOG00000003502 DMRTC2 (ENSSTOG00000003484) LYPD3 (ENSSTOG00000003599) ENSSTOG00000028708 ETHE1 (ENSSTOG00000023958) XRCC1 (ENSSTOG00000019809) ZNF575 (ENSSTOG00000011869) PINLYP (ENSSTOG00000011848) IRGQ (ENSSTOG00000011844) ZNF576 (ENSSTOG00000011841) ZNF428 (ENSSTOG00000028157) CADM4 (ENSSTOG00000012569) IRGC (ENSSTOG00000028903) ##22 SMG9 (ENSSTOG00000027351) ENSSTOG00000025185 ENSSTOG00000024433 ZNF45 (ENSSTOG00000006275) ZNF226 (ENSSTOG00000034090) ZNF227 (ENSSTOG00000005338) ZNF112 (ENSSTOG00000013458) ZNF180 (ENSSTOG00000028221) ENSSTOG00000033231 CEACAM16 (ENSSTOG00000026769) BCL3 (ENSSTOG00000004333) BCAM (ENSSTOG00000021794) NECTIN2 (ENSSTOG00000008997) ENSSTOG00000009019 CLPTM1 (ENSSTOG00000009031) Alpin marmot MODERN SPECIES 45 LYPD4 (ENSMMMG00000016374) ENSMMMG00000016289 CD177 (ENSMMMG00000016255) TEX101 (ENSMMMG00000016239) LYPD3 (ENSMMMG00000016227) PHLDB3 (ENSMMMG00000016212) ETHE1 (ENSMMMG00000016207) ZNF575 (ENSMMMG00000016204) XRCC1 (ENSMMMG00000016173) PINLYP (ENSMMMG00000016162) IRGQ (ENSMMMG00000016160) ZNF576 (ENSMMMG00000016158) ZNF428 (ENSMMMG00000016154) CADM4 (ENSMMMG00000016147) PLAUR (ENSMMMG00000016139) IRGC (ENSMMMG00000016132) ##22 SMG9 (ENSMMMG00000016123) ENSMMMG00000016122 LYPD5 (ENSMMMG00000016119) ENSMMMG00000016110 ENSMMMG00000016107 ZNF45 (ENSMMMG00000016099) ZNF226 (ENSMMMG00000016098) ZNF227 (ENSMMMG00000016087) ENSMMMG00000016066 ZNF235 (ENSMMMG00000016063) ZNF112 (ENSMMMG00000016057) ZNF180 (ENSMMMG00000016049) CEACAM20 (ENSMMMG00000016034) ENSMMMG00000016029 ENSMMMG00000016028 Eurasian red squirrel MODERN SPECIES 8 LYPD4 (ENSSVLG00005025397) ENSSVLG00005025430 CD177 (ENSSVLG00005025475) TEX101 (ENSSVLG00005025538) LYPD3 (ENSSVLG00005025547) PHLDB3 (ENSSVLG00005025565) ETHE1 (ENSSVLG00005025590) ZNF575 (ENSSVLG00005025605) XRCC1 (ENSSVLG00005025624) ENSSVLG00005025642 IRGQ (ENSSVLG00005025653) ZNF576 (ENSSVLG00005025659) ZNF428 (ENSSVLG00005025666) CADM4 (ENSSVLG00005025674) PLAUR (ENSSVLG00005025687) IRGC (ENSSVLG00005025694) ##22 SMG9 (ENSSVLG00005025700) KCNN4 (ENSSVLG00005025708) LYPD5 (ENSSVLG00005025716) ENSSVLG00005025723 ENSSVLG00005025725 ZNF404 (ENSSVLG00005025730) ENSSVLG00005025739 ENSSVLG00005025744 ZNF45 (ENSSVLG00005025751) ENSSVLG00005025755 ENSSVLG00005017000 ENSSVLG00005017075 ENSSVLG00005017153 ZNF227 (ENSSVLG00005017299) ZNF233 (ENSSVLG00005017340) Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 Hystricomorpha_a ANCESTRAL SPECIES 39 ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 Guinea pig MODERN SPECIES 80 DMRTC2 (ENSCPOG00000001805) LYPD4 (ENSCPOG00000001804) ENSCPOG00000030020 TEX101 (ENSCPOG00000000483) LYPD3 (ENSCPOG00000002284) ENSCPOG00000020180 ETHE1 (ENSCPOG00000000484) ZNF575 (ENSCPOG00000038787) XRCC1 (ENSCPOG00000005719) ENSCPOG00000040066 IRGQ (ENSCPOG00000031699) ZNF576 (ENSCPOG00000032435) ZNF428 (ENSCPOG00000033683) CADM4 (ENSCPOG00000034472) PLAUR (ENSCPOG00000011128) IRGC (ENSCPOG00000000918) ##22 SMG9 (ENSCPOG00000000919) KCNN4 (ENSCPOG00000001038) LYPD5 (ENSCPOG00000021326) ZNF45 (ENSCPOG00000002985) ZNF226 (ENSCPOG00000040740) ZNF235 (ENSCPOG00000039731) ZNF112 (ENSCPOG00000035016) ZNF180 (ENSCPOG00000034649) ENSCPOG00000006369 ENSCPOG00000026521 CEACAM16 (ENSCPOG00000020065) BCL3 (ENSCPOG00000015728) CBLC (ENSCPOG00000001085) BCAM (ENSCPOG00000013570) NECTIN2 (ENSCPOG00000039888) Hystricomorpha_b ANCESTRAL SPECIES 49 ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 Degu MODERN SPECIES 238 LYPD4 (ENSODEG00000009945) ENSODEG00000009641 ENSODEG00000009652 ENSODEG00000008792 LYPD3 (ENSODEG00000009353) ENSODEG00000008595 ETHE1 (ENSODEG00000008887) ZNF575 (ENSODEG00000008628) XRCC1 (ENSODEG00000008863) ENSODEG00000008737 IRGQ (ENSODEG00000009332) ZNF428 (ENSODEG00000009041) CADM4 (ENSODEG00000010861) PLAUR (ENSODEG00000010245) ENSODEG00000019696 IRGC (ENSODEG00000009791) ##22 SMG9 (ENSODEG00000010484) KCNN4 (ENSODEG00000008740) LYPD5 (ENSODEG00000008374) ENSODEG00000019532 ZNF45 (ENSODEG00000011301) ZNF227 (ENSODEG00000008802) ENSODEG00000008591 ENSODEG00000010507 ZNF235 (ENSODEG00000008851) ZNF112 (ENSODEG00000009193) ZNF180 (ENSODEG00000010071) ENSODEG00000019539 CEACAM19 (ENSODEG00000008206) CEACAM16 (ENSODEG00000008673) BCL3 (ENSODEG00000009380) Long-tailed chinchilla MODERN SPECIES 262 RPS19 (ENSCLAG00000001110) DMRTC2 (ENSCLAG00000001131) LYPD4 (ENSCLAG00000001144) TEX101 (ENSCLAG00000001178) ENSCLAG00000001219 LYPD3 (ENSCLAG00000001283) PHLDB3 (ENSCLAG00000001550) ETHE1 (ENSCLAG00000001597) ZNF575 (ENSCLAG00000001612) XRCC1 (ENSCLAG00000001641) ENSCLAG00000001693 IRGQ (ENSCLAG00000001709) ZNF428 (ENSCLAG00000001728) CADM4 (ENSCLAG00000001757) PLAUR (ENSCLAG00000001788) IRGC (ENSCLAG00000017638) ##22 SMG9 (ENSCLAG00000002372) KCNN4 (ENSCLAG00000002394) LYPD5 (ENSCLAG00000002411) ZNF45 (ENSCLAG00000002994) ZNF226 (ENSCLAG00000003065) ZNF227 (ENSCLAG00000003244) ZNF112 (ENSCLAG00000003483) ZNF180 (ENSCLAG00000003922) CEACAM20 (ENSCLAG00000004118) CEACAM19 (ENSCLAG00000004658) BCL3 (ENSCLAG00000005552) CEACAM16 (ENSCLAG00000006180) CBLC (ENSCLAG00000006275) BCAM (ENSCLAG00000001205) ENSCLAG00000001250 Rodentia_B ANCESTRAL SPECIES 20 ENSGT00530000063351.a.b ENSGT00530000063351.a.a.z ENSGT01100000263479.A ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 Myomorpha ANCESTRAL SPECIES 20 ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT01100000263479.A ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 Muroidea ANCESTRAL SPECIES 18 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392 Muroidea_A ANCESTRAL SPECIES 20 ENSGT00530000063351.a.b ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00800000125325 Murinae ANCESTRAL SPECIES 19 ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.a.y.a.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000163265.f.b.b ENSGT00940000163265.f.b.a ENSGT00940000163265.f.a ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C Mus ANCESTRAL SPECIES ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.a.y.a.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000163265.f.b.b ENSGT00940000163265.f.b.a ENSGT00940000163265.e.b ENSGT01030000234576.D.a.b.b.b.h ENSGT00940000163265.e.a ENSGT00940000163265.f.a ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Mus_A ANCESTRAL SPECIES 1 ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.a.y.a.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000163265.f.b.b ENSGT00940000163265.f.b.a ENSGT00940000163265.e.b ENSGT01030000234576.D.a.b.b.b.h ENSGT00940000163265.e.a ENSGT00940000163265.f.a ENSGT00940000162215 ENSGT00940000162315 ENSGT00940000163218.g ENSGT01100000263479.E.h Mus_B ANCESTRAL SPECIES ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.a.a.y.a.a.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000163265.f.b.b ENSGT00940000163265.f.b.a ENSGT00940000163265.e.b ENSGT01030000234576.D.a.b.b.b.h ENSGT00940000163265.e.a ENSGT00940000163265.f.a ENSGT00940000162215 ENSGT00940000162315 ENSGT01030000234553.b.b.c.a.a.a.a.a.a.b ENSGT01030000234553.b.b.c.a.a.a.a.a.b.a Mouse MODERN SPECIES 16 Cd177 (ENSMUSG00000052212) Lypd11 (ENSMUSG00000058717) Lypd10 (ENSMUSG00000045587) Tex101 (ENSMUSG00000062773) Lypd3 (ENSMUSG00000057454) Phldb3 (ENSMUSG00000074277) Ethe1 (ENSMUSG00000064254) Zfp575 (ENSMUSG00000066721) Xrcc1 (ENSMUSG00000051768) Pinlyp (ENSMUSG00000011632) Irgq (ENSMUSG00000041037) Gm50092 (ENSMUSG00000117477) Zfp428 (ENSMUSG00000064264) Cadm4 (ENSMUSG00000054793) Plaur (ENSMUSG00000046223) Irgc1 (ENSMUSG00000062028) ##22 Smg9 (ENSMUSG00000002210) Kcnn4 (ENSMUSG00000054342) Lypd5 (ENSMUSG00000030484) Tescl (ENSMUSG00000055826) Zfp94 (ENSMUSG00000074282) Zfp61 (ENSMUSG00000050605) Zfp93 (ENSMUSG00000055305) Zfp108 (ENSMUSG00000030486) Zfp109 (ENSMUSG00000074283) Zfp111 (ENSMUSG00000087598) Zfp114 (ENSMUSG00000068962) Zfp235 (ENSMUSG00000047603) Zfp112 (ENSMUSG00000052675) Zfp180 (ENSMUSG00000057101) Vmn1r183 (ENSMUSG00000118318) Mus_C ANCESTRAL SPECIES 15 ENSGT00530000063351.a.b ENSGT01100000263479.A ENSGT00530000063351.a.a.y.a.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000163265.f.b.b ENSGT00940000163265.f.b.a ENSGT00940000163265.e.b ENSGT01030000234576.D.a.b.b.b.h ENSGT00940000163265.e.a ENSGT00940000163265.f.a ENSGT00940000162215 ENSGT00940000162315 ENSGT01030000234553.b.b.c.a.a.a.a.a.a.b ENSGT01030000234553.b.b.c.a.a.a.a.a.b.a spretus MODERN SPECIES 16 MGP_SPRETEiJ_G0030443 Cd177 (MGP_SPRETEiJ_G0030442) Lypd11 (MGP_SPRETEiJ_G0030441) MGP_SPRETEiJ_G0030440 Tex101 (MGP_SPRETEiJ_G0030439) Lypd3 (MGP_SPRETEiJ_G0030438) Phldb3 (MGP_SPRETEiJ_G0030437) Ethe1 (MGP_SPRETEiJ_G0030436) Zfp575 (MGP_SPRETEiJ_G0030435) Xrcc1 (MGP_SPRETEiJ_G0030434) Pinlyp (MGP_SPRETEiJ_G0030433) Irgq (MGP_SPRETEiJ_G0030432) Zfp428 (MGP_SPRETEiJ_G0030431) Cadm4 (MGP_SPRETEiJ_G0030430) Plaur (MGP_SPRETEiJ_G0030429) Irgc1 (MGP_SPRETEiJ_G0030428) ##22 Smg9 (MGP_SPRETEiJ_G0030427) Kcnn4 (MGP_SPRETEiJ_G0030426) Lypd5 (MGP_SPRETEiJ_G0030425) Tescl (MGP_SPRETEiJ_G0030424) Zfp94 (MGP_SPRETEiJ_G0030423) Zfp61 (MGP_SPRETEiJ_G0030422) MGP_SPRETEiJ_G0030421 Zfp108 (MGP_SPRETEiJ_G0030420) Zfp109 (MGP_SPRETEiJ_G0030419) MGP_SPRETEiJ_G0030418 Zfp114 (MGP_SPRETEiJ_G0030417) Zfp235 (MGP_SPRETEiJ_G0030416) Zfp112 (MGP_SPRETEiJ_G0030415) Zfp180 (MGP_SPRETEiJ_G0030414) Vmn1r183 (MGP_SPRETEiJ_G0030413) Steppe mouse MODERN SPECIES 2922 ENSMSIG00000023238 Tex101 (ENSMSIG00000023253) Lypd3 (ENSMSIG00000023271) ENSMSIG00000023286 Phldb3 (ENSMSIG00000023295) Ethe1 (ENSMSIG00000023315) Zfp575 (ENSMSIG00000023330) Xrcc1 (ENSMSIG00000023340) Pinlyp (ENSMSIG00000023409) Irgq (ENSMSIG00000023429) Zfp428 (ENSMSIG00000023443) ENSMSIG00000023452 Plaur (ENSMSIG00000000090) Irgc1 (ENSMSIG00000000162) ##22 Smg9 (ENSMSIG00000000210) Kcnn4 (ENSMSIG00000000335) Lypd5 (ENSMSIG00000000604) Tescl (ENSMSIG00000000643) Zfp94 (ENSMSIG00000000665) Zfp61 (ENSMSIG00000000707) Zfp93 (ENSMSIG00000000760) Zfp108 (ENSMSIG00000000782) Zfp109 (ENSMSIG00000000832) Zfp111 (ENSMSIG00000000867) ENSMSIG00000000889 Zfp235 (ENSMSIG00000000907) Zfp112 (ENSMSIG00000000929) Zfp180 (ENSMSIG00000000989) ENSMSIG00000001020 Ryukyu mouse MODERN SPECIES 16 MGP_CAROLIEiJ_G0029349 Dmrtc2 (MGP_CAROLIEiJ_G0029348) Lypd4 (MGP_CAROLIEiJ_G0029347) Ceacam10 (MGP_CAROLIEiJ_G0029346) Tex101 (MGP_CAROLIEiJ_G0029345) Lypd3 (MGP_CAROLIEiJ_G0029344) Phldb3 (MGP_CAROLIEiJ_G0029343) Ethe1 (MGP_CAROLIEiJ_G0029342) Zfp575 (MGP_CAROLIEiJ_G0029341) Xrcc1 (MGP_CAROLIEiJ_G0029340) Pinlyp (MGP_CAROLIEiJ_G0029339) Irgq (MGP_CAROLIEiJ_G0029338) Zfp428 (MGP_CAROLIEiJ_G0029337) Cadm4 (MGP_CAROLIEiJ_G0029336) Plaur (MGP_CAROLIEiJ_G0029335) Irgc1 (MGP_CAROLIEiJ_G0029334) ##22 Smg9 (MGP_CAROLIEiJ_G0029333) Kcnn4 (MGP_CAROLIEiJ_G0029332) Lypd5 (MGP_CAROLIEiJ_G0029331) Tescl (MGP_CAROLIEiJ_G0029330) Zfp94 (MGP_CAROLIEiJ_G0029329) MGP_CAROLIEiJ_G0029328 Zfp93 (MGP_CAROLIEiJ_G0029327) Zfp108 (MGP_CAROLIEiJ_G0029326) Zfp109 (MGP_CAROLIEiJ_G0029325) Zfp111 (MGP_CAROLIEiJ_G0029324) Zfp114 (MGP_CAROLIEiJ_G0029323) Zfp235 (MGP_CAROLIEiJ_G0029322) Zfp112 (MGP_CAROLIEiJ_G0029321) Zfp180 (MGP_CAROLIEiJ_G0029320) MGP_CAROLIEiJ_G0029319 Shrew mouse MODERN SPECIES 10 Dmrtc2 (MGP_PahariEiJ_G0021201) Lypd4 (MGP_PahariEiJ_G0021200) Ceacam10 (MGP_PahariEiJ_G0021199) Cd177 (MGP_PahariEiJ_G0021198) Tex101 (MGP_PahariEiJ_G0021196) Lypd3 (MGP_PahariEiJ_G0021195) Phldb3 (MGP_PahariEiJ_G0021194) MGP_PahariEiJ_G0021193 Zfp575 (MGP_PahariEiJ_G0021192) Xrcc1 (MGP_PahariEiJ_G0021191) Pinlyp (MGP_PahariEiJ_G0021190) Irgq (MGP_PahariEiJ_G0021189) Zfp428 (MGP_PahariEiJ_G0021188) Cadm4 (MGP_PahariEiJ_G0021187) Plaur (MGP_PahariEiJ_G0021186) Irgc1 (MGP_PahariEiJ_G0021185) ##22 Smg9 (MGP_PahariEiJ_G0021184) Kcnn4 (MGP_PahariEiJ_G0021183) Lypd5 (MGP_PahariEiJ_G0021182) Tescl (MGP_PahariEiJ_G0021181) Zfp94 (MGP_PahariEiJ_G0021180) MGP_PahariEiJ_G0021179 Zfp93 (MGP_PahariEiJ_G0021178) Zfp108 (MGP_PahariEiJ_G0021177) Zfp109 (MGP_PahariEiJ_G0021176) Zfp111 (MGP_PahariEiJ_G0021175) MGP_PahariEiJ_G0021174 Zfp235 (MGP_PahariEiJ_G0021173) Zfp112 (MGP_PahariEiJ_G0021172) Zfp180 (MGP_PahariEiJ_G0021171) Bcl3 (MGP_PahariEiJ_G0021170) Rat MODERN SPECIES LOC681077 (ENSRNOG00000067391) LOC100363535 (ENSRNOG00000066726) Lypd10 (ENSRNOG00000049821) Tex101 (ENSRNOG00000020057) Lypd3 (ENSRNOG00000019999) Phldb3 (ENSRNOG00000055259) Ethe1 (ENSRNOG00000019982) Zfp575 (ENSRNOG00000024065) Xrcc1 (ENSRNOG00000019915) Pinlyp (ENSRNOG00000019862) Irgq (ENSRNOG00000070901) Srrm5 (ENSRNOG00000050032) Zfp428 (ENSRNOG00000019802) Cadm4 (ENSRNOG00000024243) Plaur (ENSRNOG00000037931) Irgc (ENSRNOG00000024257) ##22 Smg9 (ENSRNOG00000019596) Kcnn4 (ENSRNOG00000019440) Lypd5 (ENSRNOG00000019432) Tescl (ENSRNOG00000019427) LOC102548695 (ENSRNOG00000055608) Zfp94 (ENSRNOG00000065649) Zfp94 (ENSRNOG00000019416) Zfp108 (ENSRNOG00000032625) LOC108348989 (ENSRNOG00000030351) ENSRNOG00000064652 Znf235-ps1 (ENSRNOG00000063144) Zfp111 (ENSRNOG00000024376) Zfp235 (ENSRNOG00000068100) Zfp112 (ENSRNOG00000029022) Zfp180 (ENSRNOG00000029336) Cricetidae ANCESTRAL SPECIES 29 ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00800000125325 Cricetinae ANCESTRAL SPECIES 42 ENSGT00530000063351.a.a.y ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162545 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00940000161392.f ENSGT00940000162336 Golden Hamster MODERN SPECIES 834 Lypd3 (ENSMAUG00000011227) Phldb3 (ENSMAUG00000012335) Zfp575 (ENSMAUG00000021247) Xrcc1 (ENSMAUG00000020378) Irgq (ENSMAUG00000017882) Irgc1 (ENSMAUG00000007910) ##22 Kcnn4 (ENSMAUG00000008460) Lypd5 (ENSMAUG00000008445) Zfp61 (ENSMAUG00000007219) ENSMAUG00000001537 Zfp180 (ENSMAUG00000007945) ENSMAUG00000009160 Ceacam16 (ENSMAUG00000010901) Bcl3 (ENSMAUG00000019044) Cblc (ENSMAUG00000020128) Bcam (ENSMAUG00000017056) Nectin2 (ENSMAUG00000009205) Tomm40 (ENSMAUG00000008919) Apoe (ENSMAUG00000015829) Apoc1 (ENSMAUG00000020478) Apoc4 (ENSMAUG00000019705) Chinese hamster chok1gshd MODERN SPECIES 328 ENSCGRG00001010084 Tex101 (ENSCGRG00001011178) Lypd3 (ENSCGRG00001013156) Phldb3 (ENSCGRG00001021026) Ethe1 (ENSCGRG00001000826) Xrcc1 (ENSCGRG00001009779) Pinlyp (ENSCGRG00001012366) Irgq (ENSCGRG00001013212) Zfp428 (ENSCGRG00001013406) Cadm4 (ENSCGRG00001016623) Plaur (ENSCGRG00001017851) Irgc1 (ENSCGRG00001013934) ##22 Smg9 (ENSCGRG00001018966) Kcnn4 (ENSCGRG00001002200) Lypd5 (ENSCGRG00001006771) Zfp94 (ENSCGRG00001012640) Zfp61 (ENSCGRG00001013367) ENSCGRG00001014904 ENSCGRG00001015424 Zfp112 (ENSCGRG00001017579) Zfp180 (ENSCGRG00001019378) ENSCGRG00001017036 Ceacam19 (ENSCGRG00001017389) Ceacam16 (ENSCGRG00001019208) Bcl3 (ENSCGRG00001019375) Cblc (ENSCGRG00001002264) Bcam (ENSCGRG00001004345) Cricetidae_B ANCESTRAL SPECIES 41 ENSGT00730000111056 ENSGT00390000002861 ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.B ENSGT01100000263479.C ENSGT00800000125325 ENSGT00940000161392.f ENSGT00940000162336 ENSGT00940000161038 Northern American deer mouse MODERN SPECIES Selenow (ENSPEMG00000005090) ENSPEMG00000031382 ENSPEMG00000027693 Cd177 (ENSPEMG00000022001) Tex101 (ENSPEMG00000021573) Lypd3 (ENSPEMG00000021920) Phldb3 (ENSPEMG00000022660) Ethe1 (ENSPEMG00000023092) Zfp575 (ENSPEMG00000023173) Xrcc1 (ENSPEMG00000015072) Pinlyp (ENSPEMG00000011116) Irgq (ENSPEMG00000030272) Zfp428 (ENSPEMG00000022485) Cadm4 (ENSPEMG00000021606) Plaur (ENSPEMG00000016821) Irgc1 (ENSPEMG00000021834) ##22 Smg9 (ENSPEMG00000023431) Kcnn4 (ENSPEMG00000022131) Lypd5 (ENSPEMG00000022714) Tescl (ENSPEMG00000031056) ENSPEMG00000026707 ENSPEMG00000030245 Zfp94 (ENSPEMG00000000860) ENSPEMG00000026747 ENSPEMG00000027474 ENSPEMG00000018022 Zfp112 (ENSPEMG00000008510) Zfp180 (ENSPEMG00000009190) Igsf23 (ENSPEMG00000012022) ENSPEMG00000015604 Ceacam19 (ENSPEMG00000001382) Prairie vole MODERN SPECIES 354 Atp1a3 (ENSMOCG00000015750) Rabac1 (ENSMOCG00000002729) ENSMOCG00000011140 Arhgef1 (ENSMOCG00000009746) Rps19 (ENSMOCG00000022408) Dmrtc2 (ENSMOCG00000018292) Lypd4 (ENSMOCG00000008530) ENSMOCG00000015518 Ethe1 (ENSMOCG00000006120) Zfp575 (ENSMOCG00000017783) Xrcc1 (ENSMOCG00000022521) Pinlyp (ENSMOCG00000013333) Irgq (ENSMOCG00000013018) ENSMOCG00000012553 Cadm4 (ENSMOCG00000016755) Irgc1 (ENSMOCG00000012592) ##22 Smg9 (ENSMOCG00000014343) Kcnn4 (ENSMOCG00000004304) Lypd5 (ENSMOCG00000020197) Zfp329 (ENSMOCG00000007161) ENSMOCG00000018600 Zfp128 (ENSMOCG00000009285) Zscan22 (ENSMOCG00000005599) Rps5 (ENSMOCG00000022992) Rnf225 (ENSMOCG00000002634) Zfp324 (ENSMOCG00000019412) ENSMOCG00000018903 Slc27a5 (ENSMOCG00000004298) Zbtb45 (ENSMOCG00000001388) Trim28 (ENSMOCG00000015909) Chmp2a (ENSMOCG00000003404) Upper Galilee mountains blind mole rat MODERN SPECIES 1616 Cd177 (ENSNGAG00000011413) ENSNGAG00000007227 Tex101 (ENSNGAG00000012734) Lypd3 (ENSNGAG00000018774) Phldb3 (ENSNGAG00000019549) Ethe1 (ENSNGAG00000010635) Zfp575 (ENSNGAG00000012057) Xrcc1 (ENSNGAG00000015409) Pinlyp (ENSNGAG00000012310) Irgq (ENSNGAG00000015082) Zfp428 (ENSNGAG00000000625) Cadm4 (ENSNGAG00000014069) Plaur (ENSNGAG00000000082) Irgc1 (ENSNGAG00000011213) ##22 ENSNGAG00000000486 Smg9 (ENSNGAG00000019062) Kcnn4 (ENSNGAG00000000241) Lypd5 (ENSNGAG00000015499) Zfp94 (ENSNGAG00000019166) ENSNGAG00000001937 ENSNGAG00000010473 Zfp112 (ENSNGAG00000015748) Zfp180 (ENSNGAG00000015381) ENSNGAG00000000107 Ceacam16 (ENSNGAG00000000737) Bcl3 (ENSNGAG00000015405) Cblc (ENSNGAG00000009613) Bcam (ENSNGAG00000001125) Nectin2 (ENSNGAG00000019227) Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183007.a.a.b ##22 Common shrew MODERN SPECIES 1753 IRGC (ENSSARG00000009327) ##22 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 Artiodactyla ANCESTRAL SPECIES 5 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Suina ANCESTRAL SPECIES 2 ENSGT01100000263479.D.a.a.c.a.b.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000163825 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 799 ENSCWAG00000004700 ENSCWAG00000004775 TEX101 (ENSCWAG00000004804) ENSCWAG00000004860 LYPD3 (ENSCWAG00000004887) PHLDB3 (ENSCWAG00000004916) ETHE1 (ENSCWAG00000004995) ZNF575 (ENSCWAG00000005015) XRCC1 (ENSCWAG00000005046) IRGQ (ENSCWAG00000005156) ZNF576 (ENSCWAG00000005171) ZNF428 (ENSCWAG00000005194) CADM4 (ENSCWAG00000005260) PLAUR (ENSCWAG00000005323) IRGC (ENSCWAG00000005378) ##22 ENSCWAG00000005388 ##22 SMG9 (ENSCWAG00000005410) KCNN4 (ENSCWAG00000005458) LYPD5 (ENSCWAG00000005496) ENSCWAG00000005527 ZNF404 (ENSCWAG00000005563) ZNF45 (ENSCWAG00000005586) ZNF234 (ENSCWAG00000005619) ENSCWAG00000005634 ZNF226 (ENSCWAG00000005655) ZNF227 (ENSCWAG00000005673) ZNF235 (ENSCWAG00000005704) ZNF112 (ENSCWAG00000005819) ZNF180 (ENSCWAG00000005870) PVR (ENSCWAG00000006135) CEACAM19 (ENSCWAG00000006149) Chacoan peccary MODERN SPECIES 799 ENSCWAG00000004700 ENSCWAG00000004775 TEX101 (ENSCWAG00000004804) ENSCWAG00000004860 LYPD3 (ENSCWAG00000004887) PHLDB3 (ENSCWAG00000004916) ETHE1 (ENSCWAG00000004995) ZNF575 (ENSCWAG00000005015) XRCC1 (ENSCWAG00000005046) IRGQ (ENSCWAG00000005156) ZNF576 (ENSCWAG00000005171) ZNF428 (ENSCWAG00000005194) CADM4 (ENSCWAG00000005260) PLAUR (ENSCWAG00000005323) IRGC (ENSCWAG00000005378) ##22 ENSCWAG00000005388 ##22 SMG9 (ENSCWAG00000005410) KCNN4 (ENSCWAG00000005458) LYPD5 (ENSCWAG00000005496) ENSCWAG00000005527 ZNF404 (ENSCWAG00000005563) ZNF45 (ENSCWAG00000005586) ZNF234 (ENSCWAG00000005619) ENSCWAG00000005634 ZNF226 (ENSCWAG00000005655) ZNF227 (ENSCWAG00000005673) ZNF235 (ENSCWAG00000005704) ZNF112 (ENSCWAG00000005819) ZNF180 (ENSCWAG00000005870) PVR (ENSCWAG00000006135) Pig DUPLICATION Pig MODERN SPECIES 14 CD177 (ENSSSCG00000003051) TEX101 (ENSSSCG00000003052) BSP1 (ENSSSCG00000003053) LYPD3 (ENSSSCG00000003062) PHLDB3 (ENSSSCG00000003063) ETHE1 (ENSSSCG00000003064) ZNF575 (ENSSSCG00000003054) XRCC1 (ENSSSCG00000003055) IRGQ (ENSSSCG00000030637) ZNF576 (ENSSSCG00000036291) ZNF428 (ENSSSCG00000003059) SRRM5 (ENSSSCG00000059115) CADM4 (ENSSSCG00000003061) PLAUR (ENSSSCG00000032434) IRGC (ENSSSCG00000055225) ##22 ENSSSCG00000049211 ##22 SMG9 (ENSSSCG00000003068) KCNN4 (ENSSSCG00000003069) LYPD5 (ENSSSCG00000003073) ENSSSCG00000003072 ZNF404 (ENSSSCG00000003071) ZNF45 (ENSSSCG00000003070) ENSSSCG00000003076 ZNF226 (ENSSSCG00000055498) ZNF227 (ENSSSCG00000033420) ZNF235 (ENSSSCG00000022434) ZNF112 (ENSSSCG00000003077) ZNF180 (ENSSSCG00000026699) CEACAM20 (ENSSSCG00000028218) ENSSSCG00000003080 ENSSSCG00000003079 Pig MODERN SPECIES 14 ENSSSCG00000003047 CD177 (ENSSSCG00000003051) TEX101 (ENSSSCG00000003052) BSP1 (ENSSSCG00000003053) LYPD3 (ENSSSCG00000003062) PHLDB3 (ENSSSCG00000003063) ETHE1 (ENSSSCG00000003064) ZNF575 (ENSSSCG00000003054) XRCC1 (ENSSSCG00000003055) IRGQ (ENSSSCG00000030637) ZNF576 (ENSSSCG00000036291) ZNF428 (ENSSSCG00000003059) SRRM5 (ENSSSCG00000059115) CADM4 (ENSSSCG00000003061) PLAUR (ENSSSCG00000032434) IRGC (ENSSSCG00000055225) ##22 ENSSSCG00000049211 ##22 SMG9 (ENSSSCG00000003068) KCNN4 (ENSSSCG00000003069) LYPD5 (ENSSSCG00000003073) ENSSSCG00000003072 ZNF404 (ENSSSCG00000003071) ZNF45 (ENSSSCG00000003070) ENSSSCG00000003076 ZNF226 (ENSSSCG00000055498) ZNF227 (ENSSSCG00000033420) ZNF235 (ENSSSCG00000022434) ZNF112 (ENSSSCG00000003077) ZNF180 (ENSSSCG00000026699) CEACAM20 (ENSSSCG00000028218) ENSSSCG00000003080 Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00530000063351.b ENSGT00940000164580.c.a.a.a ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Camelidae ANCESTRAL SPECIES 15 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580.c.a.a.a ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 ENSGT00940000162315 ENSGT01100000263479.E.h Arabian camel MODERN SPECIES 35 ENSCDRG00005018941 TEX101 (ENSCDRG00005018962) ENSCDRG00005005070 LYPD3 (ENSCDRG00005005083) PHLDB3 (ENSCDRG00005005113) ETHE1 (ENSCDRG00005005227) ZNF575 (ENSCDRG00005005260) XRCC1 (ENSCDRG00005005286) ENSCDRG00005005376 IRGQ (ENSCDRG00005005417) ZNF576 (ENSCDRG00005005425) ZNF428 (ENSCDRG00005005437) ENSCDRG00005005447 CADM4 (ENSCDRG00005005472) PLAUR (ENSCDRG00005005497) IRGC (ENSCDRG00005005530) ##22 SMG9 (ENSCDRG00005005539) KCNN4 (ENSCDRG00005005573) LYPD5 (ENSCDRG00005005605) ZNF404 (ENSCDRG00005005646) ZNF45 (ENSCDRG00005005664) ZNF234 (ENSCDRG00005005693) ZNF226 (ENSCDRG00005005721) ZNF227 (ENSCDRG00005005736) ZNF235 (ENSCDRG00005005741) ZNF233 (ENSCDRG00005005755) ZNF112 (ENSCDRG00005005772) ZNF285 (ENSCDRG00005005793) ENSCDRG00005005803 ZNF180 (ENSCDRG00005005828) ENSCDRG00005005843 Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00940000164580.c.a.a.a ENSGT00940000164580.c.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 ENSGT00940000162315 Cetacea ANCESTRAL SPECIES 6 ENSGT00390000002861 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580.c.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT01100000263491.a.b.a.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Odontoceti ANCESTRAL SPECIES 6 ENSGT00390000002861 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580.c.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000005197.a.y.b ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00390000013102.f.r ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000002398.d ENSGT00390000005197.a.z ENSGT00390000005197.a.y.b ENSGT00940000162402 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00530000063351.a.b ENSGT00390000002861 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000005197.a.y.b ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 Monodontidae ANCESTRAL SPECIES 3 ENSGT00530000063351.a.b ENSGT00390000002861 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT00940000162848 ENSGT01100000263479.C Beluga whale MODERN SPECIES 14 DMRTC2 (ENSDLEG00000001939) LYPD4 (ENSDLEG00000001925) CD177 (ENSDLEG00000001902) TEX101 (ENSDLEG00000001894) LYPD3 (ENSDLEG00000001887) PHLDB3 (ENSDLEG00000001864) ETHE1 (ENSDLEG00000001847) ZNF575 (ENSDLEG00000001841) XRCC1 (ENSDLEG00000001821) ENSDLEG00000001807 IRGQ (ENSDLEG00000001800) ZNF576 (ENSDLEG00000001790) ZNF428 (ENSDLEG00000001786) CADM4 (ENSDLEG00000001773) PLAUR (ENSDLEG00000001764) IRGC (ENSDLEG00000001744) ##22 SMG9 (ENSDLEG00000001728) KCNN4 (ENSDLEG00000001716) ENSDLEG00000001706 ENSDLEG00000001698 ENSDLEG00000001693 ZNF404 (ENSDLEG00000001690) ZNF45 (ENSDLEG00000001671) ZNF226 (ENSDLEG00000001630) ZNF233 (ENSDLEG00000001616) ZNF112 (ENSDLEG00000001593) ZNF180 (ENSDLEG00000001579) PVR (ENSDLEG00000001569) ENSDLEG00000001530 ENSDLEG00000001503 BCL3 (ENSDLEG00000001484) Narwhal MODERN SPECIES 296 LYPD4 (ENSMMNG00015004446) CXCL17 (ENSMMNG00015005243) CD177 (ENSMMNG00015005258) TEX101 (ENSMMNG00015005281) LYPD3 (ENSMMNG00015005295) PHLDB3 (ENSMMNG00015005317) ETHE1 (ENSMMNG00015005363) ZNF575 (ENSMMNG00015005376) XRCC1 (ENSMMNG00015005404) ENSMMNG00015005448 IRGQ (ENSMMNG00015005465) ZNF576 (ENSMMNG00015005472) ZNF428 (ENSMMNG00015005482) CADM4 (ENSMMNG00015005492) PLAUR (ENSMMNG00015005513) IRGC (ENSMMNG00015005542) ##22 SMG9 (ENSMMNG00015005571) KCNN4 (ENSMMNG00015005629) ENSMMNG00015005688 ENSMMNG00015005709 ZNF404 (ENSMMNG00015005731) ZNF226 (ENSMMNG00015005773) ZNF234 (ENSMMNG00015005804) ZNF227 (ENSMMNG00015005818) ZNF233 (ENSMMNG00015005842) ENSMMNG00015005869 ZNF235 (ENSMMNG00015005891) ZNF112 (ENSMMNG00015005915) ZNF180 (ENSMMNG00015005951) PVR (ENSMMNG00015005992) CEACAM16 (ENSMMNG00015006016) Vaquita MODERN SPECIES 10 LYPD4 (ENSPSNG00000012952) CXCL17 (ENSPSNG00000012891) CD177 (ENSPSNG00000013918) TEX101 (ENSPSNG00000013688) LYPD3 (ENSPSNG00000013639) PHLDB3 (ENSPSNG00000013304) ETHE1 (ENSPSNG00000013230) ZNF575 (ENSPSNG00000013183) XRCC1 (ENSPSNG00000012900) ENSPSNG00000012788 IRGQ (ENSPSNG00000012740) ZNF576 (ENSPSNG00000012707) ZNF428 (ENSPSNG00000012675) CADM4 (ENSPSNG00000012638) PLAUR (ENSPSNG00000012605) IRGC (ENSPSNG00000012553) ##22 SMG9 (ENSPSNG00000012488) KCNN4 (ENSPSNG00000012439) ENSPSNG00000012199 ENSPSNG00000012110 ZNF404 (ENSPSNG00000012045) ZNF45 (ENSPSNG00000011992) ZNF234 (ENSPSNG00000011970) ZNF226 (ENSPSNG00000011933) ENSPSNG00000011903 ZNF227 (ENSPSNG00000011880) ENSPSNG00000011845 ENSPSNG00000011802 ZNF235 (ENSPSNG00000011738) ZNF112 (ENSPSNG00000011685) ENSPSNG00000011637 Pecora ANCESTRAL SPECIES 4 ENSGT00940000164580.c.a.a.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 27 ENSCHYG00000001272 ENSCHYG00000001281 LYPD3 (ENSCHYG00000001288) PHLDB3 (ENSCHYG00000001325) ETHE1 (ENSCHYG00000001436) ZNF575 (ENSCHYG00000001461) XRCC1 (ENSCHYG00000001497) ENSCHYG00000001623 IRGQ (ENSCHYG00000001659) ZNF576 (ENSCHYG00000001670) ZNF428 (ENSCHYG00000001681) ENSCHYG00000001690 CADM4 (ENSCHYG00000001753) PLAUR (ENSCHYG00000001789) IRGC (ENSCHYG00000001820) ##22 ENSCHYG00000001830 ##22 SMG9 (ENSCHYG00000001847) KCNN4 (ENSCHYG00000001881) LYPD5 (ENSCHYG00000001907) ENSCHYG00000001933 ENSCHYG00000001950 ZNF404 (ENSCHYG00000001970) ENSCHYG00000001997 ZNF226 (ENSCHYG00000002018) ZNF227 (ENSCHYG00000002031) ENSCHYG00000002049 ZNF112 (ENSCHYG00000002076) ZNF180 (ENSCHYG00000002115) CEACAM20 (ENSCHYG00000002177) ENSCHYG00000002440 ENSCHYG00000002453 Yarkand deer MODERN SPECIES 27 ENSCHYG00000001267 ENSCHYG00000001272 ENSCHYG00000001281 LYPD3 (ENSCHYG00000001288) PHLDB3 (ENSCHYG00000001325) ETHE1 (ENSCHYG00000001436) ZNF575 (ENSCHYG00000001461) XRCC1 (ENSCHYG00000001497) ENSCHYG00000001623 IRGQ (ENSCHYG00000001659) ZNF576 (ENSCHYG00000001670) ZNF428 (ENSCHYG00000001681) ENSCHYG00000001690 CADM4 (ENSCHYG00000001753) PLAUR (ENSCHYG00000001789) IRGC (ENSCHYG00000001820) ##22 ENSCHYG00000001830 ##22 SMG9 (ENSCHYG00000001847) KCNN4 (ENSCHYG00000001881) LYPD5 (ENSCHYG00000001907) ENSCHYG00000001933 ENSCHYG00000001950 ZNF404 (ENSCHYG00000001970) ENSCHYG00000001997 ZNF226 (ENSCHYG00000002018) ZNF227 (ENSCHYG00000002031) ENSCHYG00000002049 ZNF112 (ENSCHYG00000002076) ZNF180 (ENSCHYG00000002115) CEACAM20 (ENSCHYG00000002177) ENSCHYG00000002440 Percora_a ANCESTRAL SPECIES 4 ENSGT00940000164580.c.a.a.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 124 PHLDB3 (ENSMMSG00000015988) ETHE1 (ENSMMSG00000015915) ZNF575 (ENSMMSG00000015882) XRCC1 (ENSMMSG00000015782) ENSMMSG00000015745 ENSMMSG00000015716 ENSMMSG00000015695 ENSMMSG00000015679 ENSMMSG00000015665 IRGQ (ENSMMSG00000015638) ZNF576 (ENSMMSG00000015626) ZNF428 (ENSMMSG00000015613) CADM4 (ENSMMSG00000015593) PLAUR (ENSMMSG00000015550) IRGC (ENSMMSG00000015531) ##22 ENSMMSG00000015501 ##22 SMG9 (ENSMMSG00000015444) KCNN4 (ENSMMSG00000015395) LYPD5 (ENSMMSG00000015382) ENSMMSG00000015309 ZNF404 (ENSMMSG00000015286) ENSMMSG00000015243 ENSMMSG00000015231 ZNF234 (ENSMMSG00000015198) ZNF226 (ENSMMSG00000015187) ZNF227 (ENSMMSG00000015171) ZNF235 (ENSMMSG00000015090) ZNF112 (ENSMMSG00000015073) ZNF180 (ENSMMSG00000015052) ENSMMSG00000015023 ENSMMSG00000014996 Siberian musk deer MODERN SPECIES 124 LYPD3 (ENSMMSG00000016144) PHLDB3 (ENSMMSG00000015988) ETHE1 (ENSMMSG00000015915) ZNF575 (ENSMMSG00000015882) XRCC1 (ENSMMSG00000015782) ENSMMSG00000015745 ENSMMSG00000015716 ENSMMSG00000015695 ENSMMSG00000015679 ENSMMSG00000015665 IRGQ (ENSMMSG00000015638) ZNF576 (ENSMMSG00000015626) ZNF428 (ENSMMSG00000015613) CADM4 (ENSMMSG00000015593) PLAUR (ENSMMSG00000015550) IRGC (ENSMMSG00000015531) ##22 ENSMMSG00000015501 ##22 SMG9 (ENSMMSG00000015444) KCNN4 (ENSMMSG00000015395) LYPD5 (ENSMMSG00000015382) ENSMMSG00000015309 ZNF404 (ENSMMSG00000015286) ENSMMSG00000015243 ENSMMSG00000015231 ZNF234 (ENSMMSG00000015198) ZNF226 (ENSMMSG00000015187) ZNF227 (ENSMMSG00000015171) ZNF235 (ENSMMSG00000015090) ZNF112 (ENSMMSG00000015073) ZNF180 (ENSMMSG00000015052) ENSMMSG00000015023 Bovidae ANCESTRAL SPECIES 4 ENSGT00940000164580.c.a.a.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Caprinae ANCESTRAL SPECIES 4 ENSGT00940000164580.d.a ENSGT00940000164580.c.a.a.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Goat MODERN SPECIES 9 ENSCHIG00000016167 ENSCHIG00000011965 LYPD3 (ENSCHIG00000023735) PHLDB3 (ENSCHIG00000004054) ETHE1 (ENSCHIG00000013680) ZNF575 (ENSCHIG00000009921) XRCC1 (ENSCHIG00000020692) ENSCHIG00000018895 ENSCHIG00000024358 ENSCHIG00000016916 IRGQ (ENSCHIG00000010068) ZNF576 (ENSCHIG00000023538) ZNF428 (ENSCHIG00000018128) CADM4 (ENSCHIG00000022731) PLAUR (ENSCHIG00000018353) IRGC (ENSCHIG00000007797) ##22 SMG9 (ENSCHIG00000022222) KCNN4 (ENSCHIG00000018108) LYPD5 (ENSCHIG00000013747) ENSCHIG00000001565 ZNF404 (ENSCHIG00000015456) ZNF45 (ENSCHIG00000015006) ZNF234 (ENSCHIG00000026492) ZNF226 (ENSCHIG00000015070) ZNF227 (ENSCHIG00000026138) ZNF235 (ENSCHIG00000014937) ZNF112 (ENSCHIG00000027072) ZNF180 (ENSCHIG00000016361) ENSCHIG00000009521 CEACAM20 (ENSCHIG00000006754) ENSCHIG00000013516 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 5 LYPD3 (ENSOARG00020023506) PHLDB3 (ENSOARG00020023571) ETHE1 (ENSOARG00020023885) ZNF575 (ENSOARG00020003204) XRCC1 (ENSOARG00020003238) ENSOARG00020003393 ENSOARG00020003414 ENSOARG00020003442 ENSOARG00020003469 IRGQ (ENSOARG00020003495) ZNF576 (ENSOARG00020003515) ZNF428 (ENSOARG00020003538) CADM4 (ENSOARG00020003573) PLAUR (ENSOARG00020003623) IRGC (ENSOARG00020003642) ##22 ENSOARG00020003669 ##22 SMG9 (ENSOARG00020003705) KCNN4 (ENSOARG00020003729) LYPD5 (ENSOARG00020003752) ENSOARG00020003774 ENSOARG00020003786 ZNF404 (ENSOARG00020003870) ZNF45 (ENSOARG00020003890) ZNF234 (ENSOARG00020003917) ZNF226 (ENSOARG00020003996) ZNF227 (ENSOARG00020004012) ZNF235 (ENSOARG00020004058) ZNF112 (ENSOARG00020004127) ZNF180 (ENSOARG00020004165) CEACAM20 (ENSOARG00020004231) ENSOARG00020004986 Rambouillet Sheep MODERN SPECIES 5 BSP1 (ENSOARG00020023490) LYPD3 (ENSOARG00020023506) PHLDB3 (ENSOARG00020023571) ETHE1 (ENSOARG00020023885) ZNF575 (ENSOARG00020003204) XRCC1 (ENSOARG00020003238) ENSOARG00020003393 ENSOARG00020003414 ENSOARG00020003442 ENSOARG00020003469 IRGQ (ENSOARG00020003495) ZNF576 (ENSOARG00020003515) ZNF428 (ENSOARG00020003538) CADM4 (ENSOARG00020003573) PLAUR (ENSOARG00020003623) IRGC (ENSOARG00020003642) ##22 ENSOARG00020003669 ##22 SMG9 (ENSOARG00020003705) KCNN4 (ENSOARG00020003729) LYPD5 (ENSOARG00020003752) ENSOARG00020003774 ENSOARG00020003786 ZNF404 (ENSOARG00020003870) ZNF45 (ENSOARG00020003890) ZNF234 (ENSOARG00020003917) ZNF226 (ENSOARG00020003996) ZNF227 (ENSOARG00020004012) ZNF235 (ENSOARG00020004058) ZNF112 (ENSOARG00020004127) ZNF180 (ENSOARG00020004165) CEACAM20 (ENSOARG00020004231) Bovinae ANCESTRAL SPECIES 3 ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.b ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT01100000263491.a.b.a.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h American bison MODERN SPECIES 3227 ENSBBBG00000016666 LYPD3 (ENSBBBG00000016660) ENSBBBG00000016653 ENSBBBG00000004124 ETHE1 (ENSBBBG00000016623) ZNF575 (ENSBBBG00000016589) XRCC1 (ENSBBBG00000000747) ENSBBBG00000016528 IRGQ (ENSBBBG00000007613) ZNF576 (ENSBBBG00000016494) ZNF428 (ENSBBBG00000016472) ENSBBBG00000016464 CADM4 (ENSBBBG00000016453) PLAUR (ENSBBBG00000016431) ENSBBBG00000016400 ENSBBBG00000016394 ##22 SMG9 (ENSBBBG00000006846) KCNN4 (ENSBBBG00000004047) LYPD5 (ENSBBBG00000016337) ENSBBBG00000016331 ENSBBBG00000016320 ENSBBBG00000016310 ZNF404 (ENSBBBG00000016298) ZNF45 (ENSBBBG00000016281) ZNF234 (ENSBBBG00000016245) ENSBBBG00000016208 ZNF226 (ENSBBBG00000016177) ZNF227 (ENSBBBG00000016172) ENSBBBG00000016155 ZNF235 (ENSBBBG00000016134) ZNF112 (ENSBBBG00000016122) Bos ANCESTRAL SPECIES 4 ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d.f ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.b.b.b ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Bos_a ANCESTRAL SPECIES 16 ENSGT00940000164580.c.a.a.b ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d.f ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT01100000263491.a.b.a.a.a.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Wild yak MODERN SPECIES 892 CADM4 (ENSBMUG00000018532) PLAUR (ENSBMUG00000018517) ENSBMUG00000018494 ENSBMUG00000018463 ##22 SMG9 (ENSBMUG00000018429) KCNN4 (ENSBMUG00000018290) LYPD5 (ENSBMUG00000018241) ENSBMUG00000018230 ENSBMUG00000018207 ZNF404 (ENSBMUG00000018194) ZNF45 (ENSBMUG00000018177) ZNF234 (ENSBMUG00000018164) ENSBMUG00000018111 ZNF226 (ENSBMUG00000018098) ZNF227 (ENSBMUG00000018071) ENSBMUG00000018057 ZNF235 (ENSBMUG00000018045) ZNF112 (ENSBMUG00000018019) Domestic yak DUPLICATION Domestic yak MODERN SPECIES 12 LYPD3 (ENSBGRG00000012718) PHLDB3 (ENSBGRG00000012598) ETHE1 (ENSBGRG00000012511) ENSBGRG00000012472 XRCC1 (ENSBGRG00000011662) ENSBGRG00000011576 ENSBGRG00000011543 IRGQ (ENSBGRG00000011490) ZNF576 (ENSBGRG00000011436) SRRM5 (ENSBGRG00000011417) ZNF428 (ENSBGRG00000011363) CADM4 (ENSBGRG00000011217) ENSBGRG00000011058 ENSBGRG00000010997 IRGC (ENSBGRG00000010975) ##22 ENSBGRG00000010919 ##22 SMG9 (ENSBGRG00000010625) KCNN4 (ENSBGRG00000010498) LYPD5 (ENSBGRG00000010456) ENSBGRG00000010407 ENSBGRG00000010364 ZNF404 (ENSBGRG00000010172) ZNF45 (ENSBGRG00000010046) ZNF234 (ENSBGRG00000010025) ZNF226 (ENSBGRG00000010002) ZNF227 (ENSBGRG00000009940) ENSBGRG00000009856 ZNF235 (ENSBGRG00000009757) ENSBGRG00000009690 ZNF112 (ENSBGRG00000025290) ZNF180 (ENSBGRG00000025262) Domestic yak MODERN SPECIES 12 ENSBGRG00000012812 LYPD3 (ENSBGRG00000012718) PHLDB3 (ENSBGRG00000012598) ETHE1 (ENSBGRG00000012511) ENSBGRG00000012472 XRCC1 (ENSBGRG00000011662) ENSBGRG00000011576 ENSBGRG00000011543 IRGQ (ENSBGRG00000011490) ZNF576 (ENSBGRG00000011436) SRRM5 (ENSBGRG00000011417) ZNF428 (ENSBGRG00000011363) CADM4 (ENSBGRG00000011217) ENSBGRG00000011058 ENSBGRG00000010997 IRGC (ENSBGRG00000010975) ##22 ENSBGRG00000010919 ##22 SMG9 (ENSBGRG00000010625) KCNN4 (ENSBGRG00000010498) LYPD5 (ENSBGRG00000010456) ENSBGRG00000010407 ENSBGRG00000010364 ZNF404 (ENSBGRG00000010172) ZNF45 (ENSBGRG00000010046) ZNF234 (ENSBGRG00000010025) ZNF226 (ENSBGRG00000010002) ZNF227 (ENSBGRG00000009940) ENSBGRG00000009856 ZNF235 (ENSBGRG00000009757) ENSBGRG00000009690 ZNF112 (ENSBGRG00000025290) Bos_b ANCESTRAL SPECIES ENSGT00940000164580.c.a.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229.d.f ENSGT00730000111229.c ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.b.b.b ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000162315 ENSGT01100000263479.E.h ENSGT00390000015308 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 9 ENSBIXG00005019714 ENSBIXG00005019722 LYPD3 (ENSBIXG00005007668) PHLDB3 (ENSBIXG00005019837) ETHE1 (ENSBIXG00005019883) ZNF575 (ENSBIXG00005019906) ENSBIXG00005003257 XRCC1 (ENSBIXG00005020002) ENSBIXG00005020036 IRGQ (ENSBIXG00005020057) ZNF576 (ENSBIXG00005020095) SRRM5 (ENSBIXG00005020103) CADM4 (ENSBIXG00005020131) PLAUR (ENSBIXG00005003308) IRGC (ENSBIXG00005020149) ##22 ENSBIXG00005020159 ##22 SMG9 (ENSBIXG00005003331) KCNN4 (ENSBIXG00005020205) LYPD5 (ENSBIXG00005020222) ENSBIXG00005020238 ENSBIXG00005020267 ZNF404 (ENSBIXG00005020291) ENSBIXG00005005740 ZNF45 (ENSBIXG00005020321) ZNF227 (ENSBIXG00005020388) ENSBIXG00005020431 ZNF235 (ENSBIXG00005003463) ZNF112 (ENSBIXG00005020534) ZNF180 (ENSBIXG00005006657) CEACAM20 (ENSBIXG00005020815) ENSBIXG00005007350 Hybrid Bos Indicus MODERN SPECIES 9 ENSBIXG00005006251 ENSBIXG00005019714 ENSBIXG00005019722 LYPD3 (ENSBIXG00005007668) PHLDB3 (ENSBIXG00005019837) ETHE1 (ENSBIXG00005019883) ZNF575 (ENSBIXG00005019906) ENSBIXG00005003257 XRCC1 (ENSBIXG00005020002) ENSBIXG00005020036 IRGQ (ENSBIXG00005020057) ZNF576 (ENSBIXG00005020095) SRRM5 (ENSBIXG00005020103) CADM4 (ENSBIXG00005020131) PLAUR (ENSBIXG00005003308) IRGC (ENSBIXG00005020149) ##22 ENSBIXG00005020159 ##22 SMG9 (ENSBIXG00005003331) KCNN4 (ENSBIXG00005020205) LYPD5 (ENSBIXG00005020222) ENSBIXG00005020238 ENSBIXG00005020267 ZNF404 (ENSBIXG00005020291) ENSBIXG00005005740 ZNF45 (ENSBIXG00005020321) ZNF227 (ENSBIXG00005020388) ENSBIXG00005020431 ZNF235 (ENSBIXG00005003463) ZNF112 (ENSBIXG00005020534) ZNF180 (ENSBIXG00005006657) CEACAM20 (ENSBIXG00005020815) Cow DUPLICATION Cow MODERN SPECIES 9 LYPD3 (ENSBTAG00000018077) PHLDB3 (ENSBTAG00000004377) ETHE1 (ENSBTAG00000004379) ZNF575 (ENSBTAG00000030939) XRCC1 (ENSBTAG00000016268) PINLYP (ENSBTAG00000001260) ENSBTAG00000052396 IRGQ (ENSBTAG00000052481) ZNF576 (ENSBTAG00000030933) ZNF428 (ENSBTAG00000012796) SRRM5 (ENSBTAG00000049726) CADM4 (ENSBTAG00000015984) PLAUR (ENSBTAG00000013125) ENSBTAG00000023439 IRGC (ENSBTAG00000013766) ##22 ENSBTAG00000030922 ##22 SMG9 (ENSBTAG00000011815) KCNN4 (ENSBTAG00000004588) LYPD5 (ENSBTAG00000037888) ENSBTAG00000052425 ZNF283 (ENSBTAG00000012522) ZNF404 (ENSBTAG00000012915) ZNF45 (ENSBTAG00000026263) ZNF226 (ENSBTAG00000050035) ZNF234 (ENSBTAG00000049610) ZNF227 (ENSBTAG00000027431) ZNF235 (ENSBTAG00000007714) ZNF112 (ENSBTAG00000040209) ZNF180 (ENSBTAG00000006805) IGSF23 (ENSBTAG00000048075) PVR (ENSBTAG00000051298) Cow MODERN SPECIES 9 BSP1 (ENSBTAG00000023434) LYPD3 (ENSBTAG00000018077) PHLDB3 (ENSBTAG00000004377) ETHE1 (ENSBTAG00000004379) ZNF575 (ENSBTAG00000030939) XRCC1 (ENSBTAG00000016268) PINLYP (ENSBTAG00000001260) ENSBTAG00000052396 IRGQ (ENSBTAG00000052481) ZNF576 (ENSBTAG00000030933) ZNF428 (ENSBTAG00000012796) SRRM5 (ENSBTAG00000049726) CADM4 (ENSBTAG00000015984) PLAUR (ENSBTAG00000013125) ENSBTAG00000023439 IRGC (ENSBTAG00000013766) ##22 ENSBTAG00000030922 ##22 SMG9 (ENSBTAG00000011815) KCNN4 (ENSBTAG00000004588) LYPD5 (ENSBTAG00000037888) ENSBTAG00000052425 ZNF283 (ENSBTAG00000012522) ZNF404 (ENSBTAG00000012915) ZNF45 (ENSBTAG00000026263) ZNF226 (ENSBTAG00000050035) ZNF234 (ENSBTAG00000049610) ZNF227 (ENSBTAG00000027431) ZNF235 (ENSBTAG00000007714) ZNF112 (ENSBTAG00000040209) ZNF180 (ENSBTAG00000006805) IGSF23 (ENSBTAG00000048075) Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT01100000263479.D.a.b.a.b.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 Equus ANCESTRAL SPECIES 1 ENSGT00940000164580.e.a.b.a ENSGT00940000164580.f ENSGT01100000267053 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163513 Horse MODERN SPECIES 1 ENSECAG00000039622 ENSECAG00000029846 ENSECAG00000054892 LYPD3 (ENSECAG00000008763) PHLDB3 (ENSECAG00000010158) ETHE1 (ENSECAG00000010891) ZNF575 (ENSECAG00000028052) XRCC1 (ENSECAG00000014127) ENSECAG00000054206 IRGQ (ENSECAG00000041292) ZNF576 (ENSECAG00000013761) ZNF428 (ENSECAG00000035435) ENSECAG00000033077 CADM4 (ENSECAG00000013952) PLAUR (ENSECAG00000022127) IRGC (ENSECAG00000005837) ##22 SMG9 (ENSECAG00000007334) KCNN4 (ENSECAG00000015488) ENSECAG00000055530 LYPD5 (ENSECAG00000037472) ZNF283 (ENSECAG00000017169) ZNF404 (ENSECAG00000018247) ZNF45 (ENSECAG00000049795) ENSECAG00000049915 ZNF234 (ENSECAG00000055674) ZNF226 (ENSECAG00000020833) ZNF227 (ENSECAG00000056975) ENSECAG00000046096 ZNF235 (ENSECAG00000023724) ENSECAG00000036581 ZNF112 (ENSECAG00000000345) Donkey MODERN SPECIES 18 ENSEASG00005027040 ENSEASG00005013224 ENSEASG00005013228 ENSEASG00005029365 ENSEASG00005037995 PHLDB3 (ENSEASG00005013247) ETHE1 (ENSEASG00005013250) ZNF575 (ENSEASG00005036438) XRCC1 (ENSEASG00005013269) ENSEASG00005013533 IRGQ (ENSEASG00005034321) ZNF576 (ENSEASG00005027055) ZNF428 (ENSEASG00005025485) CADM4 (ENSEASG00005013564) ENSEASG00005013569 IRGC (ENSEASG00005027388) ##22 SMG9 (ENSEASG00005013574) KCNN4 (ENSEASG00005013586) LYPD5 (ENSEASG00005026693) ENSEASG00005013615 ZNF404 (ENSEASG00005013617) ENSEASG00005013620 ENSEASG00005022129 ZNF234 (ENSEASG00005013627) ENSEASG00005013630 ZNF227 (ENSEASG00005025554) ZNF233 (ENSEASG00005013634) ZNF235 (ENSEASG00005013637) ZNF112 (ENSEASG00005013640) ENSEASG00005026065 ENSEASG00005013644 Chiroptera ANCESTRAL SPECIES 16 ENSGT01100000263479.D.a.b.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 ENSGT00940000162315 Megabat MODERN SPECIES 321 LYPD3 (ENSPVAG00000016885) PHLDB3 (ENSPVAG00000016886) ETHE1 (ENSPVAG00000016887) ZNF575 (ENSPVAG00000016888) XRCC1 (ENSPVAG00000016889) ENSPVAG00000016890 IRGQ (ENSPVAG00000016891) ZNF576 (ENSPVAG00000016893) ZNF428 (ENSPVAG00000016894) CADM4 (ENSPVAG00000016895) ENSPVAG00000016896 IRGC (ENSPVAG00000016897) ##22 SMG9 (ENSPVAG00000016898) Microchiroptera ANCESTRAL SPECIES 18 ENSGT01100000263479.D.a.b.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000164580 ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 ENSGT01100000263479.E.h Microbat MODERN SPECIES 1339 ENSMLUG00000028776 ENSMLUG00000026518 ENSMLUG00000011777 ENSMLUG00000012221 TEX101 (ENSMLUG00000023010) ENSMLUG00000007559 LYPD3 (ENSMLUG00000008496) ZNF575 (ENSMLUG00000028273) ENSMLUG00000022404 ENSMLUG00000006945 IRGQ (ENSMLUG00000029811) ZNF576 (ENSMLUG00000013676) ZNF428 (ENSMLUG00000030739) CADM4 (ENSMLUG00000013697) PLAUR (ENSMLUG00000009718) IRGC (ENSMLUG00000009743) ##22 SMG9 (ENSMLUG00000009753) ENSMLUG00000009785 ENSMLUG00000014654 ZNF235 (ENSMLUG00000013784) ENSMLUG00000001576 ZNF180 (ENSMLUG00000013488) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 6 ENSRFEG00010019285 TEX101 (ENSRFEG00010019311) ENSRFEG00010019388 LYPD3 (ENSRFEG00010019417) PHLDB3 (ENSRFEG00010019485) ETHE1 (ENSRFEG00010019545) ZNF575 (ENSRFEG00010019651) XRCC1 (ENSRFEG00010019683) ENSRFEG00010019804 IRGQ (ENSRFEG00010019907) ZNF576 (ENSRFEG00010019936) ZNF428 (ENSRFEG00010019964) CADM4 (ENSRFEG00010020024) PLAUR (ENSRFEG00010020085) IRGC (ENSRFEG00010020189) ##22 ENSRFEG00010020206 ##22 SMG9 (ENSRFEG00010020248) KCNN4 (ENSRFEG00010020308) LYPD5 (ENSRFEG00010020387) ENSRFEG00010020460 ZNF404 (ENSRFEG00010020504) ZNF45 (ENSRFEG00010020539) ENSRFEG00010020590 ZNF234 (ENSRFEG00010020634) ZNF226 (ENSRFEG00010020656) ZNF227 (ENSRFEG00010020707) ZNF112 (ENSRFEG00010020731) ENSRFEG00010020762 ZNF285 (ENSRFEG00010020774) ZNF180 (ENSRFEG00010020798) CEACAM20 (ENSRFEG00010005357) Greater horseshoe bat MODERN SPECIES 6 ENSRFEG00010018708 ENSRFEG00010019285 TEX101 (ENSRFEG00010019311) ENSRFEG00010019388 LYPD3 (ENSRFEG00010019417) PHLDB3 (ENSRFEG00010019485) ETHE1 (ENSRFEG00010019545) ZNF575 (ENSRFEG00010019651) XRCC1 (ENSRFEG00010019683) ENSRFEG00010019804 IRGQ (ENSRFEG00010019907) ZNF576 (ENSRFEG00010019936) ZNF428 (ENSRFEG00010019964) CADM4 (ENSRFEG00010020024) PLAUR (ENSRFEG00010020085) IRGC (ENSRFEG00010020189) ##22 ENSRFEG00010020206 ##22 SMG9 (ENSRFEG00010020248) KCNN4 (ENSRFEG00010020308) LYPD5 (ENSRFEG00010020387) ENSRFEG00010020460 ZNF404 (ENSRFEG00010020504) ZNF45 (ENSRFEG00010020539) ENSRFEG00010020590 ZNF234 (ENSRFEG00010020634) ZNF226 (ENSRFEG00010020656) ZNF227 (ENSRFEG00010020707) ZNF112 (ENSRFEG00010020731) ENSRFEG00010020762 ZNF285 (ENSRFEG00010020774) ZNF180 (ENSRFEG00010020798) Carnivora ANCESTRAL SPECIES 2 ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 Felidae ANCESTRAL SPECIES 7 ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT01100000263507.D.a.b.a.b ENSGT01100000263507.D.a.b.a.a.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Panthera ANCESTRAL SPECIES 20 ENSGT01100000263479.D.a.b.a.b.a.b.c ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT01100000263507.D.a.b.a.b ENSGT01100000263507.D.a.b.a.a.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Panthera_a ANCESTRAL SPECIES 22 ENSGT00940000161904 ENSGT00530000063351.a.b ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00990000214237 ENSGT01100000263507.D.a.b.a.a.a.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 lion MODERN SPECIES 15 DMRTC2 (ENSPLOG00000009804) LYPD4 (ENSPLOG00000009823) CD177 (ENSPLOG00000009857) TEX101 (ENSPLOG00000009902) LYPD3 (ENSPLOG00000009941) PHLDB3 (ENSPLOG00000010071) ETHE1 (ENSPLOG00000010172) ZNF575 (ENSPLOG00000010203) XRCC1 (ENSPLOG00000010245) PINLYP (ENSPLOG00000010358) IRGQ (ENSPLOG00000010423) ZNF576 (ENSPLOG00000010456) ZNF428 (ENSPLOG00000010489) CADM4 (ENSPLOG00000010515) PLAUR (ENSPLOG00000010574) ENSPLOG00000010664 ##22 SMG9 (ENSPLOG00000010721) KCNN4 (ENSPLOG00000010759) LYPD5 (ENSPLOG00000010818) ENSPLOG00000010888 ENSPLOG00000010919 ZNF404 (ENSPLOG00000011009) ZNF45 (ENSPLOG00000011042) ENSPLOG00000011087 ENSPLOG00000011145 ZNF226 (ENSPLOG00000011187) ZNF227 (ENSPLOG00000011286) ZNF235 (ENSPLOG00000011322) ZNF112 (ENSPLOG00000011438) ZNF229 (ENSPLOG00000011482) ZNF180 (ENSPLOG00000011570) leopard DUPLICATION leopard MODERN SPECIES 165 ENSPPRG00000009499 ENSPPRG00000009734 TEX101 (ENSPPRG00000009778) LYPD3 (ENSPPRG00000009817) PHLDB3 (ENSPPRG00000009866) ETHE1 (ENSPPRG00000009903) ZNF575 (ENSPPRG00000009911) XRCC1 (ENSPPRG00000010086) PINLYP (ENSPPRG00000010101) IRGQ (ENSPPRG00000010112) ZNF576 (ENSPPRG00000010136) ZNF428 (ENSPPRG00000010556) CADM4 (ENSPPRG00000010570) PLAUR (ENSPPRG00000010744) ENSPPRG00000011938 ##22 ENSPPRG00000011949 ##22 SMG9 (ENSPPRG00000010986) KCNN4 (ENSPPRG00000011122) LYPD5 (ENSPPRG00000013917) ENSPPRG00000013955 ENSPPRG00000013993 ZNF404 (ENSPPRG00000014086) ZNF45 (ENSPPRG00000014129) ENSPPRG00000014182 ZNF234 (ENSPPRG00000014300) ZNF226 (ENSPPRG00000014343) ZNF227 (ENSPPRG00000014370) ZNF235 (ENSPPRG00000014617) ZNF112 (ENSPPRG00000015186) ZNF285 (ENSPPRG00000015213) ZNF229 (ENSPPRG00000015288) leopard MODERN SPECIES 165 LYPD4 (ENSPPRG00000009032) ENSPPRG00000009499 ENSPPRG00000009734 TEX101 (ENSPPRG00000009778) LYPD3 (ENSPPRG00000009817) PHLDB3 (ENSPPRG00000009866) ETHE1 (ENSPPRG00000009903) ZNF575 (ENSPPRG00000009911) XRCC1 (ENSPPRG00000010086) PINLYP (ENSPPRG00000010101) IRGQ (ENSPPRG00000010112) ZNF576 (ENSPPRG00000010136) ZNF428 (ENSPPRG00000010556) CADM4 (ENSPPRG00000010570) PLAUR (ENSPPRG00000010744) ENSPPRG00000011938 ##22 ENSPPRG00000011949 ##22 SMG9 (ENSPPRG00000010986) KCNN4 (ENSPPRG00000011122) LYPD5 (ENSPPRG00000013917) ENSPPRG00000013955 ENSPPRG00000013993 ZNF404 (ENSPPRG00000014086) ZNF45 (ENSPPRG00000014129) ENSPPRG00000014182 ZNF234 (ENSPPRG00000014300) ZNF226 (ENSPPRG00000014343) ZNF227 (ENSPPRG00000014370) ZNF235 (ENSPPRG00000014617) ZNF112 (ENSPPRG00000015186) ZNF285 (ENSPPRG00000015213) Cat DUPLICATION Cat MODERN SPECIES 246 CD177 (ENSFCAG00000039801) TEX101 (ENSFCAG00000007160) LYPD3 (ENSFCAG00000025558) PHLDB3 (ENSFCAG00000025344) ETHE1 (ENSFCAG00000027744) ZNF575 (ENSFCAG00000005221) XRCC1 (ENSFCAG00000005222) PINLYP (ENSFCAG00000023807) IRGQ (ENSFCAG00000032529) ZNF576 (ENSFCAG00000006439) ENSFCAG00000047313 ZNF428 (ENSFCAG00000021940) CADM4 (ENSFCAG00000005229) PLAUR (ENSFCAG00000005230) IRGC (ENSFCAG00000036428) ##22 ENSFCAG00000050160 ##22 SMG9 (ENSFCAG00000001104) KCNN4 (ENSFCAG00000001105) LYPD5 (ENSFCAG00000044312) FELCATV1R1 (ENSFCAG00000030467) ENSFCAG00000028236 ENSFCAG00000041687 ZNF404 (ENSFCAG00000041837) ZNF45 (ENSFCAG00000037598) ENSFCAG00000047182 ENSFCAG00000042152 ZNF226 (ENSFCAG00000028299) ZNF227 (ENSFCAG00000035198) ZNF235 (ENSFCAG00000043995) ZNF112 (ENSFCAG00000031825) ENSFCAG00000009559 Cat MODERN SPECIES 246 ENSFCAG00000042962 CD177 (ENSFCAG00000039801) TEX101 (ENSFCAG00000007160) LYPD3 (ENSFCAG00000025558) PHLDB3 (ENSFCAG00000025344) ETHE1 (ENSFCAG00000027744) ZNF575 (ENSFCAG00000005221) XRCC1 (ENSFCAG00000005222) PINLYP (ENSFCAG00000023807) IRGQ (ENSFCAG00000032529) ZNF576 (ENSFCAG00000006439) ENSFCAG00000047313 ZNF428 (ENSFCAG00000021940) CADM4 (ENSFCAG00000005229) PLAUR (ENSFCAG00000005230) IRGC (ENSFCAG00000036428) ##22 ENSFCAG00000050160 ##22 SMG9 (ENSFCAG00000001104) KCNN4 (ENSFCAG00000001105) LYPD5 (ENSFCAG00000044312) FELCATV1R1 (ENSFCAG00000030467) ENSFCAG00000028236 ENSFCAG00000041687 ZNF404 (ENSFCAG00000041837) ZNF45 (ENSFCAG00000037598) ENSFCAG00000047182 ENSFCAG00000042152 ZNF226 (ENSFCAG00000028299) ZNF227 (ENSFCAG00000035198) ZNF235 (ENSFCAG00000043995) ZNF112 (ENSFCAG00000031825) Caniformia ANCESTRAL SPECIES 1 ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 Caniformia_b ANCESTRAL SPECIES 2 ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 Mustelinae ANCESTRAL SPECIES 7 ENSGT01100000263479.D.a.b.a.b.a.b.b.c ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00730000111657 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000160225.B ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Ferret MODERN SPECIES 291 ENSMPUG00000007009 CD177 (ENSMPUG00000006959) LYPD3 (ENSMPUG00000006923) PHLDB3 (ENSMPUG00000006905) ETHE1 (ENSMPUG00000006865) ZNF575 (ENSMPUG00000006853) XRCC1 (ENSMPUG00000006750) PINLYP (ENSMPUG00000006741) IRGQ (ENSMPUG00000006734) ZNF576 (ENSMPUG00000006726) ENSMPUG00000019381 ZNF428 (ENSMPUG00000006718) CADM4 (ENSMPUG00000006662) PLAUR (ENSMPUG00000006628) ENSMPUG00000006623 IRGC (ENSMPUG00000006607) ##22 SMG9 (ENSMPUG00000006594) KCNN4 (ENSMPUG00000006586) LYPD5 (ENSMPUG00000006560) ZNF404 (ENSMPUG00000006528) ZNF45 (ENSMPUG00000006522) ENSMPUG00000006510 ZNF234 (ENSMPUG00000006501) ZNF226 (ENSMPUG00000006493) ZNF227 (ENSMPUG00000006485) ENSMPUG00000006481 ZNF235 (ENSMPUG00000006476) ZNF112 (ENSMPUG00000006469) ZNF285 (ENSMPUG00000006463) ZNF229 (ENSMPUG00000006454) ZNF180 (ENSMPUG00000006445) American mink DUPLICATION American mink MODERN SPECIES 385 TEX101 (ENSNVIG00000024655) LYPD3 (ENSNVIG00000024656) ENSNVIG00000024657 ENSNVIG00000024658 ETHE1 (ENSNVIG00000024659) ZNF575 (ENSNVIG00000024660) XRCC1 (ENSNVIG00000024661) YS037 (ENSNVIG00000024663) IRGQ (ENSNVIG00000024664) ZNF576 (ENSNVIG00000024665) ZNF428 (ENSNVIG00000024667) ENSNVIG00000024670 CADM4 (ENSNVIG00000024671) PLAUR (ENSNVIG00000024672) IRGC (ENSNVIG00000024675) ##22 ENSNVIG00000024676 ##22 SMG9 (ENSNVIG00000024677) KCNN4 (ENSNVIG00000024680) LYPD5 (ENSNVIG00000024683) ENSNVIG00000024685 ENSNVIG00000024686 ENSNVIG00000024687 ZNF404 (ENSNVIG00000024688) ZNF45 (ENSNVIG00000024690) ENSNVIG00000024692 ZNF234 (ENSNVIG00000024693) ZNF226 (ENSNVIG00000024694) ZNF227 (ENSNVIG00000024695) ENSNVIG00000024698 American mink MODERN SPECIES 385 ENSNVIG00000024653 TEX101 (ENSNVIG00000024655) LYPD3 (ENSNVIG00000024656) ENSNVIG00000024657 ENSNVIG00000024658 ETHE1 (ENSNVIG00000024659) ZNF575 (ENSNVIG00000024660) XRCC1 (ENSNVIG00000024661) YS037 (ENSNVIG00000024663) IRGQ (ENSNVIG00000024664) ZNF576 (ENSNVIG00000024665) ZNF428 (ENSNVIG00000024667) ENSNVIG00000024670 CADM4 (ENSNVIG00000024671) PLAUR (ENSNVIG00000024672) IRGC (ENSNVIG00000024675) ##22 ENSNVIG00000024676 ##22 SMG9 (ENSNVIG00000024677) KCNN4 (ENSNVIG00000024680) LYPD5 (ENSNVIG00000024683) ENSNVIG00000024685 ENSNVIG00000024686 ENSNVIG00000024687 ZNF404 (ENSNVIG00000024688) ZNF45 (ENSNVIG00000024690) ENSNVIG00000024692 ZNF234 (ENSNVIG00000024693) ZNF226 (ENSNVIG00000024694) ZNF227 (ENSNVIG00000024695) ENSNVIG00000024698 Ursidae ANCESTRAL SPECIES 30 ENSGT01100000263479.D.a.b.a.b.b.b.b.b ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162402 ENSGT00940000162215 ENSGT00910000148012 ENSGT00940000163580 Giant Panda MODERN SPECIES 3 ENSAMEG00000028854 ENSAMEG00000026491 ENSAMEG00000004391 ENSAMEG00000004388 LYPD3 (ENSAMEG00000029143) PHLDB3 (ENSAMEG00000004365) ETHE1 (ENSAMEG00000004309) ZNF575 (ENSAMEG00000030673) XRCC1 (ENSAMEG00000004315) PINLYP (ENSAMEG00000004300) IRGQ (ENSAMEG00000025509) ZNF576 (ENSAMEG00000020254) SRRM5 (ENSAMEG00000024436) CADM4 (ENSAMEG00000004262) PLAUR (ENSAMEG00000004240) IRGC (ENSAMEG00000004232) ##22 SMG9 (ENSAMEG00000004211) KCNN4 (ENSAMEG00000004174) ENSAMEG00000004164 ENSAMEG00000011588 ENSAMEG00000011590 BCKDHA (ENSAMEG00000011602) B3GNT8 (ENSAMEG00000020086) ENSAMEG00000011623 ENSAMEG00000011640 B9D2 (ENSAMEG00000024862) TGFB1 (ENSAMEG00000011645) CCDC97 (ENSAMEG00000011675) HNRNPUL1 (ENSAMEG00000011681) AXL (ENSAMEG00000011737) ENSAMEG00000011816 Ursus ANCESTRAL SPECIES 13 ENSGT01100000263479.D.a.b.a.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000186232 ENSGT00940000153599.B.b ENSGT00940000161267.b ENSGT00940000164159.b ENSGT00940000164159.a ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00940000162215 ENSGT00940000162402 ENSGT00940000163513 Polar bear MODERN SPECIES 115 ENSUMAG00000022902 ENSUMAG00000022904 ENSUMAG00000022909 CD177 (ENSUMAG00000022912) TEX101 (ENSUMAG00000022918) LYPD3 (ENSUMAG00000022922) PHLDB3 (ENSUMAG00000022927) ETHE1 (ENSUMAG00000022938) ZNF575 (ENSUMAG00000022942) XRCC1 (ENSUMAG00000022952) ENSUMAG00000023010 IRGQ (ENSUMAG00000023014) ZNF576 (ENSUMAG00000023020) CADM4 (ENSUMAG00000023023) PLAUR (ENSUMAG00000023024) IRGC (ENSUMAG00000023026) ##22 SMG9 (ENSUMAG00000023029) KCNN4 (ENSUMAG00000023032) ENSUMAG00000023044 LYPD5 (ENSUMAG00000023045) ENSUMAG00000023046 ZNF404 (ENSUMAG00000023049) ENSUMAG00000023052 ZNF45 (ENSUMAG00000023055) ENSUMAG00000023056 ZNF234 (ENSUMAG00000023058) ZNF226 (ENSUMAG00000023059) ZNF227 (ENSUMAG00000023061) ZNF233 (ENSUMAG00000023065) ZNF235 (ENSUMAG00000023068) ENSUMAG00000023075 American black bear DUPLICATION American black bear MODERN SPECIES 3424 PLAUR (ENSUAMG00000003171) IRGC (ENSUAMG00000003166) ##22 ENSUAMG00000003162 ##22 SMG9 (ENSUAMG00000003156) KCNN4 (ENSUAMG00000003144) ENSUAMG00000003141 LYPD5 (ENSUAMG00000003139) American black bear MODERN SPECIES 3424 PLAUR (ENSUAMG00000003171) IRGC (ENSUAMG00000003166) ##22 ENSUAMG00000003162 ##22 SMG9 (ENSUAMG00000003156) KCNN4 (ENSUAMG00000003144) ENSUAMG00000003141 LYPD5 (ENSUAMG00000003139) Canidae ANCESTRAL SPECIES 5 ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 Red fox MODERN SPECIES 101 ENSVVUG00000009056 CD177 (ENSVVUG00000009048) ENSVVUG00000009039 LYPD3 (ENSVVUG00000009019) PHLDB3 (ENSVVUG00000008846) ETHE1 (ENSVVUG00000008821) ZNF575 (ENSVVUG00000008814) XRCC1 (ENSVVUG00000008812) PINLYP (ENSVVUG00000008807) IRGQ (ENSVVUG00000008805) ZNF576 (ENSVVUG00000008784) SRRM5 (ENSVVUG00000008780) ZNF428 (ENSVVUG00000008774) CADM4 (ENSVVUG00000008752) PLAUR (ENSVVUG00000008737) IRGC (ENSVVUG00000008733) ##22 SMG9 (ENSVVUG00000008720) KCNN4 (ENSVVUG00000008664) LYPD5 (ENSVVUG00000008653) ENSVVUG00000008643 ENSVVUG00000008632 ZNF45 (ENSVVUG00000008630) ENSVVUG00000008624 ZNF404 (ENSVVUG00000008609) ZNF226 (ENSVVUG00000008599) ZNF227 (ENSVVUG00000008589) ZNF235 (ENSVVUG00000008581) ZNF112 (ENSVVUG00000008575) ZNF285 (ENSVVUG00000008570) ENSVVUG00000008568 ZNF229 (ENSVVUG00000008563) Canis_lupus ANCESTRAL SPECIES ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.a ENSGT00530000063351.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00730000111407 ENSGT00730000111657 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00960000186612.B.a.b.a.a.a.b ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163825 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000163513 ENSGT00940000162315 Dog MODERN SPECIES ENSCAFG00845000474 TEX101 (ENSCAFG00845000460) LYPD3 (ENSCAFG00845000436) PHLDB3 (ENSCAFG00845000239) ZNF575 (ENSCAFG00845000167) XRCC1 (ENSCAFG00845000135) PINLYP (ENSCAFG00845000108) IRGQ (ENSCAFG00845000097) ZNF576 (ENSCAFG00845000088) SRRM5 (ENSCAFG00845000084) ZNF428 (ENSCAFG00845000078) CADM4 (ENSCAFG00845008687) ETHE1 (ENSCAFG00845008644) ENSCAFG00845008616 ENSCAFG00845008563 IRGC (ENSCAFG00845008530) ##22 SMG9 (ENSCAFG00845008437) KCNN4 (ENSCAFG00845008365) LYPD5 (ENSCAFG00845008334) ENSCAFG00845008292 ENSCAFG00845008218 ZNF404 (ENSCAFG00845008145) ENSCAFG00845008078 ENSCAFG00845008021 ZNF226 (ENSCAFG00845007985) ZNF227 (ENSCAFG00845007887) ZNF112 (ENSCAFG00845007747) ZNF285 (ENSCAFG00845007674) ZNF229 (ENSCAFG00845007627) ZNF180 (ENSCAFG00845007589) CEACAM20 (ENSCAFG00845007515) Dingo DUPLICATION Dingo MODERN SPECIES 125 CD177 (ENSCAFG00020014056) TEX101 (ENSCAFG00020014049) LYPD3 (ENSCAFG00020014035) PHLDB3 (ENSCAFG00020014022) ETHE1 (ENSCAFG00020014000) ZNF575 (ENSCAFG00020013996) XRCC1 (ENSCAFG00020013318) PINLYP (ENSCAFG00020013283) IRGQ (ENSCAFG00020013280) ZNF576 (ENSCAFG00020013276) SRRM5 (ENSCAFG00020013274) ZNF428 (ENSCAFG00020013266) CADM4 (ENSCAFG00020013262) PLAUR (ENSCAFG00020013250) IRGC (ENSCAFG00020013248) ##22 ENSCAFG00020013243 ##22 SMG9 (ENSCAFG00020013169) KCNN4 (ENSCAFG00020013151) LYPD5 (ENSCAFG00020013131) ENSCAFG00020013127 ZNF404 (ENSCAFG00020013122) ZNF45 (ENSCAFG00020013117) ENSCAFG00020013111 ZNF234 (ENSCAFG00020013089) ZNF226 (ENSCAFG00020013066) ENSCAFG00020013065 ENSCAFG00020013062 ZNF235 (ENSCAFG00020013058) ZNF285 (ENSCAFG00020013053) ZNF229 (ENSCAFG00020013048) ZNF180 (ENSCAFG00020013017) Dingo MODERN SPECIES 125 ENSCAFG00020014071 CD177 (ENSCAFG00020014056) TEX101 (ENSCAFG00020014049) LYPD3 (ENSCAFG00020014035) PHLDB3 (ENSCAFG00020014022) ETHE1 (ENSCAFG00020014000) ZNF575 (ENSCAFG00020013996) XRCC1 (ENSCAFG00020013318) PINLYP (ENSCAFG00020013283) IRGQ (ENSCAFG00020013280) ZNF576 (ENSCAFG00020013276) SRRM5 (ENSCAFG00020013274) ZNF428 (ENSCAFG00020013266) CADM4 (ENSCAFG00020013262) PLAUR (ENSCAFG00020013250) IRGC (ENSCAFG00020013248) ##22 ENSCAFG00020013243 ##22 SMG9 (ENSCAFG00020013169) KCNN4 (ENSCAFG00020013151) LYPD5 (ENSCAFG00020013131) ENSCAFG00020013127 ZNF404 (ENSCAFG00020013122) ZNF45 (ENSCAFG00020013117) ENSCAFG00020013111 ZNF234 (ENSCAFG00020013089) ZNF226 (ENSCAFG00020013066) ENSCAFG00020013065 ENSCAFG00020013062 ZNF235 (ENSCAFG00020013058) ZNF285 (ENSCAFG00020013053) ZNF229 (ENSCAFG00020013048) Marsupialia ANCESTRAL SPECIES 20 ENSGT00940000154363.A ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00950000183066.a.a.a ENSGT01020000230438.B.b.b.b ENSGT00390000010337.A ENSGT00390000009010 ENSGT01080000257333.D.c.b.a ENSGT01080000257333.D.c.b.b ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01050000244814.a.a.b.b.a.a ENSGT01050000244814.a.a.b.b.a.b ENSGT00390000009936 ENSGT00940000162314 ENSGT00940000160467 Opossum MODERN SPECIES 3 YIF1B (ENSMODG00000013126) ENSMODG00000013117 ENSMODG00000023798 SIPA1L3 (ENSMODG00000013113) VPS13D (ENSMODG00000012443) DHRS3 (ENSMODG00000012387) ENSMODG00000012382 CFAP107 (ENSMODG00000025501) LRRC38 (ENSMODG00000012379) PRDM2 (ENSMODG00000012362) ENSMODG00000042736 KAZN (ENSMODG00000012346) TMEM51 (ENSMODG00000012339) CADM4 (ENSMODG00000020835) ENSMODG00000028135 ENSMODG00000020833 ##22 SMG9 (ENSMODG00000020832) ENSMODG00000043239 ENSMODG00000020830 ENSMODG00000020831 ENSMODG00000020829 ENSMODG00000041549 ENSMODG00000040397 ENSMODG00000045966 HAS1 (ENSMODG00000020827) ENSMODG00000043283 ENSMODG00000029011 ENSMODG00000023801 ENSMODG00000020825 LIM2 (ENSMODG00000020823) NKG7 (ENSMODG00000037599) Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a ENSGT01080000257333.D.d.a.a ENSGT00530000063351.b ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00950000183066.a.a.a ENSGT01020000230438.B.b.b.b ENSGT00390000010337.A ENSGT00390000009010 ENSGT01080000257333.D.c.b.a ENSGT01080000257333.D.c.b.b ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01050000244814.a.a.b.b.a.a ENSGT01050000244814.a.a.b.b.a.b ENSGT00390000009936 ENSGT00940000162314 ENSGT00940000160467 Diprotodontia ANCESTRAL SPECIES 52 ENSGT00940000154363.A ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a ENSGT01080000257333.D.d.a.a ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00950000183066.a.a.a ENSGT01020000230438.B.b.b.b ENSGT00390000010337.A ENSGT00390000009010 ENSGT01080000257333.D.c.b.a ENSGT01080000257333.D.c.b.b ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01050000244814.a.a.b.b.a.a ENSGT01050000244814.a.a.b.b.a.b ENSGT00390000009936 ENSGT00940000162314 ENSGT00940000160467 Diprotodontia_a ANCESTRAL SPECIES 45 ENSGT00940000154363.A ENSGT00390000013102.f ENSGT00940000161904 ENSGT00530000063351.a ENSGT01080000257333.D.d.a.a ENSGT00940000153599.B.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00730000111229 ENSGT00510000048991 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00950000183066.a.a.a ENSGT01020000230438.B.b.b.b ENSGT00390000010337.A ENSGT00390000009010 ENSGT01080000257333.D.c.b.a ENSGT01080000257333.D.c.b.b ENSGT01050000244814.a.a.b.b.b.a.a ENSGT01050000244814.a.a.b.b.a.a ENSGT01050000244814.a.a.b.b.a.b ENSGT00390000009936 ENSGT00940000162314 ENSGT00940000160467 Common wonbat MODERN SPECIES 783 ENSVURG00010009061 ENSVURG00010009054 ENSVURG00010009027 ENSVURG00010009015 ENSVURG00010009009 LYPD3 (ENSVURG00010009002) PHLDB3 (ENSVURG00010008990) ETHE1 (ENSVURG00010008981) ZNF575 (ENSVURG00010008965) XRCC1 (ENSVURG00010008919) ENSVURG00010008902 IRGQ (ENSVURG00010008891) ZNF428 (ENSVURG00010008882) CADM4 (ENSVURG00010008878) ENSVURG00010008870 IRGC (ENSVURG00010008864) ##22 SMG9 (ENSVURG00010008859) KCNN4 (ENSVURG00010008850) ENSVURG00010008836 PPP2R1A (ENSVURG00010008821) ENSVURG00010008807 ENSVURG00010008805 HAS1 (ENSVURG00010008772) ENSVURG00010008764 ENSVURG00010008753 ENSVURG00010008742 LIM2 (ENSVURG00010008721) NKG7 (ENSVURG00010008709) ENSVURG00010008691 ETFB (ENSVURG00010008684) ENSVURG00010008674 koala MODERN SPECIES 100 ENSPCIG00000020871 ENSPCIG00000020868 ENSPCIG00000020865 ENSPCIG00000005474 ENSPCIG00000020859 LYPD3 (ENSPCIG00000020854) PHLDB3 (ENSPCIG00000020852) ENSPCIG00000020851 ZNF575 (ENSPCIG00000020850) XRCC1 (ENSPCIG00000020849) ENSPCIG00000020848 IRGQ (ENSPCIG00000020847) ZNF428 (ENSPCIG00000020846) CADM4 (ENSPCIG00000020845) ENSPCIG00000020842 IRGC (ENSPCIG00000036179) ##22 SMG9 (ENSPCIG00000020840) KCNN4 (ENSPCIG00000020839) ENSPCIG00000020838 PPP2R1A (ENSPCIG00000020837) ENSPCIG00000020836 ENSPCIG00000001613 HAS1 (ENSPCIG00000011103) ENSPCIG00000011105 ENSPCIG00000011107 ENSPCIG00000034880 ENSPCIG00000009607 LIM2 (ENSPCIG00000009589) NKG7 (ENSPCIG00000032426) ENSPCIG00000009583 ETFB (ENSPCIG00000009576) Tasmanian devil MODERN SPECIES 2 ARHGEF1 (ENSSHAG00000021894) ENSSHAG00000023118 ENSSHAG00000029316 ENSSHAG00000028065 ENSSHAG00000027176 ENSSHAG00000005369 ENSSHAG00000004961 ENSSHAG00000004319 ENSSHAG00000021713 ENSSHAG00000028898 XRCC1 (ENSSHAG00000024049) ZNF575 (ENSSHAG00000032368) ENSSHAG00000028547 CADM4 (ENSSHAG00000021112) ZNF428 (ENSSHAG00000031912) IRGC (ENSSHAG00000025405) ##22 SMG9 (ENSSHAG00000003151) KCNN4 (ENSSHAG00000030876) ENSSHAG00000002048 ENSSHAG00000000482 ENSSHAG00000025912 ENSSHAG00000002414 ENSSHAG00000024585 ENSSHAG00000000542 ENSSHAG00000006709 ENSSHAG00000006362 LIM2 (ENSSHAG00000030203) ENSSHAG00000025057 ETFB (ENSSHAG00000030219) ENSSHAG00000004473 IGLON5 (ENSSHAG00000029882) Platypus DUPLICATION Platypus MODERN SPECIES 16 ETFB (ENSOANG00000047816) ENSOANG00000002024 ENSOANG00000047261 LIM2 (ENSOANG00000045639) ENSOANG00000046361 ENSOANG00000004484 ENSOANG00000003916 ENSOANG00000036550 HAS1 (ENSOANG00000045005) ENSOANG00000014198 ENSOANG00000014199 ENSOANG00000049061 PPP2R1A (ENSOANG00000036749) ENSOANG00000045687 IRGC (ENSOANG00000039851) ##22 ENSOANG00000032289 ##22 SMG9 (ENSOANG00000046050) KCNN4 (ENSOANG00000008394) CADM4 (ENSOANG00000011306) ZNF428 (ENSOANG00000041187) IRGQ (ENSOANG00000043420) XRCC1 (ENSOANG00000010767) ZNF575 (ENSOANG00000049503) ETHE1 (ENSOANG00000049518) PHLDB3 (ENSOANG00000002789) LYPD3 (ENSOANG00000004055) ENSOANG00000004056 ENSOANG00000013939 ENSOANG00000013938 RPS19 (ENSOANG00000013660) CD79A (ENSOANG00000039470) Platypus MODERN SPECIES 16 ENSOANG00000013440 ETFB (ENSOANG00000047816) ENSOANG00000002024 ENSOANG00000047261 LIM2 (ENSOANG00000045639) ENSOANG00000046361 ENSOANG00000004484 ENSOANG00000003916 ENSOANG00000036550 HAS1 (ENSOANG00000045005) ENSOANG00000014198 ENSOANG00000014199 ENSOANG00000049061 PPP2R1A (ENSOANG00000036749) ENSOANG00000045687 IRGC (ENSOANG00000039851) ##22 ENSOANG00000032289 ##22 SMG9 (ENSOANG00000046050) KCNN4 (ENSOANG00000008394) CADM4 (ENSOANG00000011306) ZNF428 (ENSOANG00000041187) IRGQ (ENSOANG00000043420) XRCC1 (ENSOANG00000010767) ZNF575 (ENSOANG00000049503) ETHE1 (ENSOANG00000049518) PHLDB3 (ENSOANG00000002789) LYPD3 (ENSOANG00000004055) ENSOANG00000004056 ENSOANG00000013939 ENSOANG00000013938 RPS19 (ENSOANG00000013660) Sauria DUPLICATION Sauria ANCESTRAL SPECIES ENSGT00950000183007.a.a.b.db ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183007.a.a.b.db ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183007.a.a.b.db ##22 Testudinoidea ANCESTRAL SPECIES 139 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Testudinidae ANCESTRAL SPECIES 58 ENSGT01020000230438.A.a.a.a.c ENSGT00390000010337.A ENSGT00990000204431 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.a.a.b.b ##22 Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001381 ENSCABG00000001382 HAS1 (ENSCABG00000001384) ENSCABG00000001486 KCNN4 (ENSCABG00000001487) SMG9 (ENSCABG00000001502) ENSCABG00000001553 ##22 ENSCABG00000001555 ##22 ENSCABG00000001563 ##22 ENSCABG00000001564 ##22 ENSCABG00000001567 ##22 ENSCABG00000001569 ##22 ENSCABG00000001570 ##22 ENSCABG00000001572 ##22 ENSCABG00000001573 ##22 ENSCABG00000001575 ##22 ENSCABG00000001576 ##22 ENSCABG00000001577 ENSCABG00000001578 ENSCABG00000001580 ENSCABG00000001582 ENSCABG00000001585 Emydidae ANCESTRAL SPECIES 448 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.a.a.b.db ##22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1844 ENSTMTG00000018465 ##22 ENSTMTG00000018481 ##22 Three-toed box turtle MODERN SPECIES 1844 ENSTMTG00000018481 ##22 ENSTMTG00000018465 ##22 painted turtle DUPLICATION painted turtle MODERN SPECIES 1181 ENSCPBG00000021461 ##22 ENSCPBG00000021463 ##22 ENSCPBG00000021464 ##22 ENSCPBG00000021465 ##22 ENSCPBG00000021467 ##22 ENSCPBG00000021468 ##22 ENSCPBG00000021469 ENSCPBG00000021470 ##22 ENSCPBG00000021471 ##22 ENSCPBG00000021472 ##22 ENSCPBG00000021473 ##22 ENSCPBG00000021475 painted turtle MODERN SPECIES 1982 ENSCPBG00000011749 ##22 ENSCPBG00000011753 Sauria ANCESTRAL SPECIES 60 ENSGT00390000008714.a ENSGT00390000009272 ENSGT00390000011582 ENSGT00550000075099 ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000161394 ENSGT00940000159186 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.B.b.b.a.j ENSGT01020000230438.B.a.b ENSGT00940000154757 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a Lepidosauria ANCESTRAL SPECIES 120 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000161394 ENSGT00940000159186 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT00440000034367 ENSGT00950000185615 ENSGT00940000158350 ENSGT00940000162271 ENSGT00940000160963 Episquamata ANCESTRAL SPECIES 7 ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00950000183007.a.b ##22 ENSGT00950000183007.a.a.a.a ##22 ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT01030000234540.B.b.a.b ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.b.b.a.j.a.b ENSGT01020000230438.A.a.a.b ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b Toxicofera ANCESTRAL SPECIES 52 ENSGT00390000014472 ENSGT00940000161367 ENSGT00390000016718 ENSGT00940000158927 ENSGT00940000154870.D ENSGT00390000012547.a ENSGT00940000161170 ENSGT00940000154876.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757 ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00940000157599 ENSGT00940000160227 ENSGT00940000156800 ENSGT00510000048144 ENSGT00940000156346 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000016791 ENSGT00390000017697.a Elapidae ANCESTRAL SPECIES 9 ENSGT00390000008714.b ENSGT00940000162624 ENSGT00520000055635.c.b ENSGT00390000004140.a ENSGT00940000162551 ENSGT00940000159046.C ENSGT00940000160803 ENSGT01020000230438.B.a.a.bb.b ENSGT01020000230438.B.a.a.bb.a ENSGT00940000153599.B.a ENSGT00940000153599.A ENSGT00950000183206.a.b.a.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b ENSGT01080000257333.D.a.b Indian cobra DUPLICATION Indian cobra MODERN SPECIES 17 ENSNNAG00000005048 EEF1G (ENSNNAG00000005019) ENSNNAG00000005002 ENSNNAG00000004831 ENSNNAG00000004777 ARL2 (ENSNNAG00000004763) SNX15 (ENSNNAG00000004743) ENSNNAG00000004725 ENSNNAG00000004703 GPHA2 (ENSNNAG00000004684) PPP2R5B (ENSNNAG00000004617) ENSNNAG00000004593 ENSNNAG00000004581 ENSNNAG00000004560 USF1 (ENSNNAG00000004502) IRGC (ENSNNAG00000004477) ##22 ITLN1 (ENSNNAG00000004442) TXNIP (ENSNNAG00000004423) ENSNNAG00000004397 ANKRD34A (ENSNNAG00000004391) ENSNNAG00000004304 ENSNNAG00000004270 ENSNNAG00000004253 EHD1 (ENSNNAG00000004228) ENSNNAG00000004198 ENSNNAG00000004159 KLHDC9 (ENSNNAG00000004132) PFDN2 (ENSNNAG00000004112) NIT1 (ENSNNAG00000004091) DEDD (ENSNNAG00000004063) SART1 (ENSNNAG00000004013) Indian cobra MODERN SPECIES 11 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003728 ENSNNAG00000003711 ENSNNAG00000003701 ##22 ENSNNAG00000003685 ENSNNAG00000003672 ENSNNAG00000003631 ENSNNAG00000003609 ENSNNAG00000003592 ENSNNAG00000017124 ENSNNAG00000017121 ##22 ENSNNAG00000017119 ##22 ENSNNAG00000017115 ##22 ENSNNAG00000017113 ##22 ENSNNAG00000017108 ##22 ENSNNAG00000017105 ##22 SMG9 (ENSNNAG00000017093) ENSNNAG00000017076 ENSNNAG00000017070 ENSNNAG00000017062 HAS1 (ENSNNAG00000017046) ENSNNAG00000017037 ENSNNAG00000017034 ENSNNAG00000017027 ENSNNAG00000017022 ENSNNAG00000017017 ENSNNAG00000017010 PPP2R1A (ENSNNAG00000016995) ENSNNAG00000016985 ENSNNAG00000016977 IGLON5 (ENSNNAG00000016924) Elapidae_a ANCESTRAL SPECIES 107 ENSGT00950000183007.b.j.a.a.a.a ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01000000221201 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b ENSGT01080000257333.D.a.b Acanthophiinae ANCESTRAL SPECIES 71 ENSGT00950000183007.b.j.a.a.a.a ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A.a ENSGT01020000230438.A.a.a.a.a ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.b ENSGT01020000230438.B.a.a.cb ENSGT00990000213363 ENSGT01000000221201 ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01080000257333.D.a.a.a.b ENSGT01080000257333.D.a.b Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 85 NECTIN4 (ENSPTXG00000011030) ARHGAP30 (ENSPTXG00000011027) USF1 (ENSPTXG00000011026) F11R (ENSPTXG00000011023) ENSPTXG00000011020 ##22 ENSPTXG00000011011 EHBP1L1 (ENSPTXG00000011009) FAM89B (ENSPTXG00000011006) ZNRD2 (ENSPTXG00000011003) RBM14 (ENSPTXG00000011004) CCS (ENSPTXG00000011001) CCDC87 (ENSPTXG00000010999) SPTBN2 (ENSPTXG00000010993) ENSPTXG00000010992 RCE1 (ENSPTXG00000010991) ACTN3 (ENSPTXG00000010990) ENSPTXG00000010988 SF3B2 (ENSPTXG00000010986) GAL3ST3 (ENSPTXG00000010985) MRPL11 (ENSPTXG00000010984) Eastern brown snake MODERN SPECIES 115 ENSPTXG00000015113 ##22 ENSPTXG00000015107 ENSPTXG00000015106 ##22 SMG9 (ENSPTXG00000015104) ENSPTXG00000015103 ENSPTXG00000015102 ENSPTXG00000015100 HAS1 (ENSPTXG00000015055) ENSPTXG00000015044 ENSPTXG00000015031 ENSPTXG00000015030 ENSPTXG00000015027 ENSPTXG00000015026 PPP2R1A (ENSPTXG00000015025) ENSPTXG00000015024 ENSPTXG00000015023 IGLON5 (ENSPTXG00000014909) ENSPTXG00000014903 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2934 ENSNSUG00000000554 ##22 Mainland tiger snake MODERN SPECIES 665 ENSNSUG00000015774 ##22 ENSNSUG00000015775 ##22 SMG9 (ENSNSUG00000015776) ENSNSUG00000015777 ENSNSUG00000015778 Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 10170 ENSLLTG00000014274 ##22 Blue-lipped sea krait MODERN SPECIES 2546 ENSLLTG00000014187 ##22 ENSLLTG00000014179 ##22 ENSLLTG00000014175 ##22 SMG9 (ENSLLTG00000014165) ENSLLTG00000014158 KCNN4 (ENSLLTG00000014152) Lizard DUPLICATION Lizard MODERN SPECIES 357 ENSACAG00000022806 ##22 Lizard DUPLICATION Lizard MODERN SPECIES 805 ENSACAG00000004426 ENSACAG00000004429 ENSACAG00000004431 ENSACAG00000044918 ENSACAG00000040345 ENSACAG00000038431 ENSACAG00000004433 ENSACAG00000004436 ENSACAG00000004441 ENSACAG00000035908 ENSACAG00000028902 ENSACAG00000029510 ENSACAG00000036617 ##22 ENSACAG00000037309 ##22 ENSACAG00000035181 ##22 ENSACAG00000004461 ##22 ENSACAG00000040604 SMG9 (ENSACAG00000004462) ENSACAG00000043868 ENSACAG00000004522 Lizard MODERN SPECIES 358 ENSACAG00000005249 ##22 Laterata ANCESTRAL SPECIES 61 ENSGT00390000018613.b ENSGT00940000164681 ENSGT00390000011180 ENSGT00390000007071 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272 ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000159186 ENSGT00950000183007.b.i.a.b.e ##22 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00940000154757.kb ENSGT00940000158522 ENSGT00940000165856 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164158.A ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005530 ENSSMRG00000005529 ##22 ENSSMRG00000005526 ENSSMRG00000005514 ENSSMRG00000005499 ##22 ENSSMRG00000005488 ##22 ENSSMRG00000005472 ##22 ENSSMRG00000005470 ##22 ENSSMRG00000005468 ##22 ENSSMRG00000005457 ENSSMRG00000005434 ##22 ENSSMRG00000005407 ##22 ENSSMRG00000005404 ##22 ENSSMRG00000005402 ##22 ENSSMRG00000005401 ##22 IRGC (ENSSMRG00000005398) ##22 SMG9 (ENSSMRG00000005393) ENSSMRG00000005391 KCNN4 (ENSSMRG00000005389) ENSSMRG00000005388 ENSSMRG00000005381 HAS1 (ENSSMRG00000005371) ENSSMRG00000005370 ENSSMRG00000005359 ENSSMRG00000005358 ENSSMRG00000005357 ENSSMRG00000005350 ENSSMRG00000005349 ENSSMRG00000005348 PPP2R1A (ENSSMRG00000005345) ENSSMRG00000005343 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 7 ENSPMRG00000017314 ENSPMRG00000017277 EIF1AD (ENSPMRG00000017260) SART1 (ENSPMRG00000017252) DEDD (ENSPMRG00000017246) NIT1 (ENSPMRG00000017237) ENSPMRG00000017233 KLHDC9 (ENSPMRG00000017229) ENSPMRG00000017221 ENSPMRG00000017215 NECTIN4 (ENSPMRG00000017198) ARHGAP30 (ENSPMRG00000017179) USF1 (ENSPMRG00000017169) ENSPMRG00000017165 F11R (ENSPMRG00000017163) ENSPMRG00000017160 ##22 ENSPMRG00000017154 TXNIP (ENSPMRG00000017147) ENSPMRG00000017140 ENSPMRG00000017137 ENSPMRG00000017132 ANKRD34A (ENSPMRG00000017128) ENSPMRG00000017125 RBM8A (ENSPMRG00000017123) ENSPMRG00000017120 LIX1L (ENSPMRG00000017117) PEX11B (ENSPMRG00000017106) ENSPMRG00000017101 ENSPMRG00000017097 ARHGEF2 (ENSPMRG00000017077) ENSPMRG00000017067 Common wall lizard MODERN SPECIES 16 SMG9 (ENSPMRG00000007471) ENSPMRG00000007462 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007373 ##22 ENSPMRG00000007360 ENSPMRG00000007351 ##22 ENSPMRG00000007347 ENSPMRG00000007338 ENSPMRG00000007333 ENSPMRG00000007321 ENSPMRG00000009253 ENSPMRG00000009245 ENSPMRG00000009238 ENSPMRG00000009233 ENSPMRG00000009218 ENSPMRG00000009203 ENSPMRG00000009196 ENSPMRG00000009185 ENSPMRG00000009181 ##22 ENSPMRG00000009172 ENSPMRG00000009165 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 16 ENSPMRG00000009185 ENSPMRG00000009196 ENSPMRG00000009203 ENSPMRG00000009218 ENSPMRG00000009233 ENSPMRG00000009238 ENSPMRG00000009245 ENSPMRG00000009253 ENSPMRG00000007321 ENSPMRG00000007333 ENSPMRG00000007338 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 Common wall lizard MODERN SPECIES 16 ENSPMRG00000007347 ENSPMRG00000007351 ##22 ENSPMRG00000007360 ENSPMRG00000007373 ##22 ENSPMRG00000007384 ##22 ENSPMRG00000007393 ##22 ENSPMRG00000007402 ##22 ENSPMRG00000007407 ##22 ENSPMRG00000007415 ##22 ENSPMRG00000007420 ##22 ENSPMRG00000007425 ##22 ENSPMRG00000007432 ##22 ENSPMRG00000007443 ##22 ENSPMRG00000007450 ##22 ENSPMRG00000007456 ##22 ENSPMRG00000007462 ##22 SMG9 (ENSPMRG00000007471) ENSPMRG00000007487 KCNN4 (ENSPMRG00000007495) ENSPMRG00000007510 HAS1 (ENSPMRG00000007524) ENSPMRG00000007536 ENSPMRG00000007545 ENSPMRG00000007549 ENSPMRG00000007565 ENSPMRG00000007572 ENSPMRG00000007577 ENSPMRG00000007583 ENSPMRG00000007588 ENSPMRG00000007596 ENSPMRG00000007608 Archelosauria ANCESTRAL SPECIES 39 ENSGT00390000008714.a ENSGT00390000009272.r ENSGT00390000011582 ENSGT00550000075099 ENSGT00390000009272.q ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000161394 ENSGT00940000159186 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a ENSGT01020000230438.A.a.a.b ENSGT00940000154757 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 Cryptodira DUPLICATION Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES 20 ENSGT00390000003488.b ENSGT00940000158641 ENSGT00940000154412.B.a ENSGT00940000156794 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000161394 ENSGT00940000159186 ENSGT00950000183007.a.a.b.eb.n.a ##22 ENSGT00940000154757.mb ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT01090000260265 ENSGT00390000009529 ENSGT00940000160966 ENSGT00940000164842 ENSGT00940000158549 ENSGT00390000008744 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00390000003488.b ENSGT00940000158641 ENSGT00940000154412.B.a ENSGT00940000156794 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000161394 ENSGT00940000159186.fb ENSGT00950000183007.a.a.b.eb.n.a ##22 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT01050000244808.D.fb.a.b ENSGT01090000260265 ENSGT00390000009529 ENSGT00940000160966 ENSGT00940000164842 ENSGT00940000158549 ENSGT00390000008744 Testudinidae ANCESTRAL SPECIES 3 ENSGT00390000003488.b ENSGT00940000158641 ENSGT00940000154412.B.a ENSGT00940000156794 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000161394 ENSGT00960000192506 ENSGT00940000159186.fb ENSGT00950000183007.a.a.b.eb.n.a ##22 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT01050000244808.D.fb.a.b ENSGT01050000244808.D.fb.a.a Abingdon island giant tortoise MODERN SPECIES 1944 TSTD1 (ENSCABG00000013403) ENSCABG00000013401 F11R (ENSCABG00000013400) ENSCABG00000013399 ##22 KCNJ10 (ENSCABG00000013398) KCNJ9 (ENSCABG00000013397) IGSF8 (ENSCABG00000013367) ENSCABG00000013358 ATP1A2 (ENSCABG00000013152) CASQ1 (ENSCABG00000013124) PEA15 (ENSCABG00000013120) ENSCABG00000013116 PEX19 (ENSCABG00000013114) ENSCABG00000013113 ENSCABG00000013109 Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005019268 GABPB2 (ENSGEVG00005019277) DEDD (ENSGEVG00005019287) NIT1 (ENSGEVG00005019292) PFDN2 (ENSGEVG00005019297) KLHDC9 (ENSGEVG00005019304) ENSGEVG00005019330 ENSGEVG00005011800 NECTIN4 (ENSGEVG00005011864) ARHGAP30 (ENSGEVG00005011976) USF1 (ENSGEVG00005012245) TSTD1 (ENSGEVG00005012275) ENSGEVG00005012353 ENSGEVG00005012307 ENSGEVG00005012406 ENSGEVG00005012439 ##22 KCNJ10 (ENSGEVG00005012452) KCNJ9 (ENSGEVG00005012473) IGSF8 (ENSGEVG00005012513) ATP1A2 (ENSGEVG00005012712) CASQ1 (ENSGEVG00005013090) PEA15 (ENSGEVG00005013304) ENSGEVG00005013345 PEX19 (ENSGEVG00005013421) ENSGEVG00005013462 ENSGEVG00005013497 ENSGEVG00005013564 ENSGEVG00005013670 ENSGEVG00005014020 ENSGEVG00005014086 ##22 FCER1G (ENSGEVG00005014145) Emydidae ANCESTRAL SPECIES 18 ENSGT00390000003488.b ENSGT00940000158641 ENSGT00940000154412.B.a ENSGT00940000156794 ENSGT00390000008714.a ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000011582 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000157535 ENSGT00940000161411 ENSGT00940000157083 ENSGT00940000156392.b ENSGT00940000161394 ENSGT00940000159186.fb ENSGT00950000183007.a.a.b.eb.n.a ##22 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT01050000244808.D.fb.a.b ENSGT01090000260265 ENSGT00390000009529 ENSGT00940000160966 ENSGT00940000164842 ENSGT00940000158549 ENSGT00390000008744 Three-toed box turtle MODERN SPECIES 168 ENSTMTG00000016184 ##22 KCNJ10 (ENSTMTG00000016171) KCNJ9 (ENSTMTG00000016155) IGSF8 (ENSTMTG00000015999) ATP1A2 (ENSTMTG00000011221) CASQ1 (ENSTMTG00000010738) ENSTMTG00000010725 ENSTMTG00000010524 PEX19 (ENSTMTG00000010489) ENSTMTG00000010205 painted turtle MODERN SPECIES 738 ENSCPBG00000009063 GABPB2 (ENSCPBG00000009075) DEDD (ENSCPBG00000009088) NIT1 (ENSCPBG00000009095) PFDN2 (ENSCPBG00000009101) KLHDC9 (ENSCPBG00000009108) ENSCPBG00000009117 ENSCPBG00000009137 NECTIN4 (ENSCPBG00000009148) ARHGAP30 (ENSCPBG00000009161) USF1 (ENSCPBG00000009165) ENSCPBG00000009167 ENSCPBG00000009171 ENSCPBG00000009174 F11R (ENSCPBG00000009178) ENSCPBG00000009182 ##22 ENSCPBG00000009184 ENSCPBG00000009186 KCNJ10 (ENSCPBG00000009188) KCNJ9 (ENSCPBG00000009190) IGSF8 (ENSCPBG00000009194) ATP1A2 (ENSCPBG00000009198) CASQ1 (ENSCPBG00000009200) PEA15 (ENSCPBG00000009203) ENSCPBG00000009206 PEX19 (ENSCPBG00000009213) ENSCPBG00000009220 ENSCPBG00000009226 ENSCPBG00000009229 ENSCPBG00000009238 NDUFS2 (ENSCPBG00000009243) Chinese turtle MODERN SPECIES 480 B4GALT3 (ENSPSIG00000005278) ENSPSIG00000005561 ADAMTS4 (ENSPSIG00000005745) NDUFS2 (ENSPSIG00000006065) ENSPSIG00000006911 ##22 ENSPSIG00000006921 ENSPSIG00000007156 ENSPSIG00000007508 NECTIN4 (ENSPSIG00000007516) USF1 (ENSPSIG00000008116) ENSPSIG00000008677 TSTD1 (ENSPSIG00000008713) ENSPSIG00000009202 F11R (ENSPSIG00000009531) ENSPSIG00000010363 ENSPSIG00000010442 ##22 ENSPSIG00000010450 KCNJ10 (ENSPSIG00000000737) ENSPSIG00000000747 KCNJ9 (ENSPSIG00000011233) IGSF8 (ENSPSIG00000011401) ATP1A2 (ENSPSIG00000011512) CASQ1 (ENSPSIG00000004266) PEA15 (ENSPSIG00000004518) ENSPSIG00000004538 ENSPSIG00000005129 SSR2 (ENSPSIG00000005367) Cryptodira ANCESTRAL SPECIES 238 ENSGT00950000183007.a.a.b.eb.n.b ##22 ENSGT00940000154757.lb.a Testudinoidea ANCESTRAL SPECIES 171 ENSGT00390000003894 ENSGT00950000183007.a.a.b.eb.n.b ##22 ENSGT00940000154757.lb.a.d.a Testudinidae ANCESTRAL SPECIES 62 ENSGT00960000193142 ENSGT00940000168190 ENSGT01100000263505.b.b.a.a.a.b.c.a ENSGT00530000064299 ENSGT00940000160641 ENSGT00390000003308.b ENSGT00390000003306 ENSGT00390000008196 ENSGT00940000155545.a ENSGT00390000008744 ENSGT00940000158549 ENSGT00940000164842 ENSGT00940000160966 ENSGT00390000009529 ENSGT00390000003894 ENSGT00950000183007.a.a.b.eb.n.b ##22 ENSGT00940000154757.lb.a.d.a ENSGT00940000154757.lb.a.c.a.a ENSGT00940000154757.lb.a.c.b Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005015190 ENSGEVG00005015164 ENSGEVG00005015139 PCP4L1 (ENSGEVG00005015103) NR1I3 (ENSGEVG00005014694) TOMM40L (ENSGEVG00005014591) APOA2 (ENSGEVG00005014530) UFC1 (ENSGEVG00005014503) USP21 (ENSGEVG00005014466) PPOX (ENSGEVG00005014413) B4GALT3 (ENSGEVG00005014370) ENSGEVG00005014344 ADAMTS4 (ENSGEVG00005014216) NDUFS2 (ENSGEVG00005014172) FCER1G (ENSGEVG00005014145) ENSGEVG00005014086 ##22 ENSGEVG00005014020 ENSGEVG00005013670 ENSGEVG00005013564 ENSGEVG00005013497 ENSGEVG00005013462 PEX19 (ENSGEVG00005013421) ENSGEVG00005013345 PEA15 (ENSGEVG00005013304) CASQ1 (ENSGEVG00005013090) ATP1A2 (ENSGEVG00005012712) IGSF8 (ENSGEVG00005012513) KCNJ9 (ENSGEVG00005012473) KCNJ10 (ENSGEVG00005012452) ENSGEVG00005012439 ##22 ENSGEVG00005012406 Abingdon island giant tortoise MODERN SPECIES 2495 ENSCABG00000021640 ENSCABG00000021641 ENSCABG00000021642 PCP4L1 (ENSCABG00000021643) NR1I3 (ENSCABG00000021644) TOMM40L (ENSCABG00000021650) APOA2 (ENSCABG00000021652) UFC1 (ENSCABG00000021654) USP21 (ENSCABG00000021655) PPOX (ENSCABG00000021659) B4GALT3 (ENSCABG00000021669) ENSCABG00000021671 ADAMTS4 (ENSCABG00000021675) NDUFS2 (ENSCABG00000021680) ENSCABG00000021682 ENSCABG00000021684 ##22 ENSCABG00000021685 ENSCABG00000021688 ENSCABG00000021690 Emydidae ANCESTRAL SPECIES 447 ENSGT00390000003894 ENSGT00950000183007.a.a.b.eb.n.b ##22 Three-toed box turtle MODERN SPECIES 119 ENSTMTG00000005886 SDHC (ENSTMTG00000005860) MPZ (ENSTMTG00000005830) ENSTMTG00000005816 ENSTMTG00000005800 ENSTMTG00000005781 TOMM40L (ENSTMTG00000005768) APOA2 (ENSTMTG00000005757) USP21 (ENSTMTG00000005734) PPOX (ENSTMTG00000005676) B4GALT3 (ENSTMTG00000005644) ENSTMTG00000005618 ADAMTS4 (ENSTMTG00000005590) NDUFS2 (ENSTMTG00000005562) FCER1G (ENSTMTG00000005549) ENSTMTG00000005542 ##22 Chinese turtle MODERN SPECIES 480 ENSPSIG00000000721 CFAP126 (ENSPSIG00000004382) SDHC (ENSPSIG00000004408) MPZ (ENSPSIG00000004420) PCP4L1 (ENSPSIG00000004433) NR1I3 (ENSPSIG00000004437) TOMM40L (ENSPSIG00000004743) ENSPSIG00000004930 UFC1 (ENSPSIG00000004944) USP21 (ENSPSIG00000005034) PPOX (ENSPSIG00000005182) B4GALT3 (ENSPSIG00000005278) ENSPSIG00000005561 ADAMTS4 (ENSPSIG00000005745) NDUFS2 (ENSPSIG00000006065) ENSPSIG00000006911 ##22 ENSPSIG00000006921 ENSPSIG00000007156 ENSPSIG00000007508 NECTIN4 (ENSPSIG00000007516) USF1 (ENSPSIG00000008116) ENSPSIG00000008677 TSTD1 (ENSPSIG00000008713) ENSPSIG00000009202 F11R (ENSPSIG00000009531) ENSPSIG00000010363 ENSPSIG00000010442 ##22 ENSPSIG00000010450 KCNJ10 (ENSPSIG00000000737) ENSPSIG00000000747 KCNJ9 (ENSPSIG00000011233) Cryptodira ANCESTRAL SPECIES 85 ENSGT00990000204431 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b ENSGT01020000230438.B.a.b ENSGT00950000183066.a.a.a ENSGT01020000230438.B.b.b.a.j.c.a ENSGT00940000160467 ENSGT00940000167735 Testudinoidea ANCESTRAL SPECIES 45 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a ENSGT01020000230438.B.b.b.a.j.c.b.b.b.a.a ENSGT01020000230438.B.b.b.a.j.c.b.a.b ENSGT01020000230438.B.b.b.a.j.c.b.a.a Emydidae ANCESTRAL SPECIES 68 ENSGT00950000183007.b.i.b.b.b.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.a.a.a.b.a ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.d.b ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.b ENSGT01020000230438.B.b.b.a.j.c.b.b.b.a.a.b Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1491 ENSTMTG00000018190 ##22 Three-toed box turtle MODERN SPECIES 1796 ENSTMTG00000008901 ##22 painted turtle MODERN SPECIES 1128 ENSCPBG00000022413 ##22 SMG9 (ENSCPBG00000022410) KCNN4 (ENSCPBG00000022409) ENSCPBG00000022407 ENSCPBG00000022406 ENSCPBG00000022405 HAS1 (ENSCPBG00000022393) ENSCPBG00000022390 ENSCPBG00000022389 ENSCPBG00000022386 ENSCPBG00000022384 ENSCPBG00000022383 Testudinidae ANCESTRAL SPECIES 58 ENSGT00950000183007.b.i.a.a.b.b ##22 ENSGT00950000183007.a.a.b.db ##22 ENSGT00950000183007.b.i.b.b.a.b ##22 ENSGT00950000183007.b.i.b.b.b.b ##22 ENSGT00950000183007.b.i.b.a.a.a.a.b ##22 ENSGT00950000183007.b.i.b.a.a.a.b.a.a.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.a ##22 ENSGT00950000183007.b.i.b.b.b.a ##22 ENSGT00950000183007.b.i.b.a.a.b.a.b ##22 ENSGT00950000183007.a.a.b.eb.o ##22 ENSGT00390000003568 ENSGT01030000235778 ENSGT00950000182904.a.a.b ENSGT00950000182952.E ENSGT00990000204431 ENSGT00390000010337.A ENSGT01020000230438.A.a.a.a.c ENSGT01020000230438.A.a.a.b ENSGT01020000230438.A.a.a.a.d ENSGT01020000230438.B.b.b.a.i.a ENSGT01020000230438.B.b.b.a.j.c.b.b.a.b ENSGT01020000230438.B.b.b.a.j.d.a ENSGT01020000230438.B.b.b.a.j.c.b.b.b.b ENSGT01020000230438.B.b.b.a.j.c.b.b.a.a.a ENSGT01020000230438.B.b.b.a.j.c.b.b.b.a.a Abingdon island giant tortoise MODERN SPECIES 2239 ENSCABG00000001585 ENSCABG00000001582 ENSCABG00000001580 ENSCABG00000001578 ENSCABG00000001577 ENSCABG00000001576 ##22 ENSCABG00000001575 ##22 ENSCABG00000001573 ##22 ENSCABG00000001572 ##22 ENSCABG00000001570 ##22 ENSCABG00000001569 ##22 ENSCABG00000001567 ##22 ENSCABG00000001564 ##22 ENSCABG00000001563 ##22 ENSCABG00000001555 ##22 ENSCABG00000001553 ##22 SMG9 (ENSCABG00000001502) KCNN4 (ENSCABG00000001487) ENSCABG00000001486 HAS1 (ENSCABG00000001384) ENSCABG00000001382 ENSCABG00000001381 ENSCABG00000001379 ENSCABG00000001378 ENSCABG00000001374 ENSCABG00000001372 ENSCABG00000001369 ENSCABG00000001365 ENSCABG00000001362 ENSCABG00000001358 ENSCABG00000001352 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005016942 ENSGEVG00005016912 ENSGEVG00005016881 ENSGEVG00005016818 ENSGEVG00005016796 ENSGEVG00005016734 ##22 ENSGEVG00005016693 ##22 ENSGEVG00005016680 ##22 ENSGEVG00005016674 ##22 ENSGEVG00005016664 ##22 ENSGEVG00005016647 ##22 ENSGEVG00005016635 ##22 ENSGEVG00005016628 ##22 ENSGEVG00005016603 ##22 ENSGEVG00005016570 ##22 ENSGEVG00005016557 ##22 SMG9 (ENSGEVG00005016301) ENSGEVG00005016256 KCNN4 (ENSGEVG00005016227) ENSGEVG00005016204 ENSGEVG00005016180 ENSGEVG00005016154 HAS1 (ENSGEVG00005015993) ENSGEVG00005015943 ENSGEVG00005015929 ENSGEVG00005015786 ENSGEVG00005015737 ENSGEVG00005015724 ENSGEVG00005015697 ENSGEVG00005015678 ENSGEVG00005015641 Chinese turtle MODERN SPECIES 237 ENSPSIG00000009029 ##22 ENSPSIG00000000001 ##22 ENSPSIG00000008699 ##22 ENSPSIG00000001637 ##22 ENSPSIG00000008492 ##22 SMG9 (ENSPSIG00000008334) ENSPSIG00000008294 ENSPSIG00000008071 ENSPSIG00000008050 ENSPSIG00000001629 HAS1 (ENSPSIG00000006966) ENSPSIG00000006663 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1184 ENSLACG00000011935 ENSLACG00000011435 ENSLACG00000011071 ENSLACG00000010543 samhd1 (ENSLACG00000010024) ENSLACG00000009914 ENSLACG00000009424 samhd1 (ENSLACG00000009199) ENSLACG00000008137 ENSLACG00000007842 ENSLACG00000006714 ENSLACG00000006085 ENSLACG00000005910 ##22 ENSLACG00000005411 ##22 ENSLACG00000004370 ##22 ENSLACG00000002961 ##22 ENSLACG00000000467 Coelacanth MODERN SPECIES 492 ENSLACG00000016792 ##22 ENSLACG00000016688 ENSLACG00000016583 ##22 ENSLACG00000016534 ##22 ENSLACG00000016344 ##22 APOLD1 (ENSLACG00000016272) ENSLACG00000016204 ENSLACG00000015917 SMG9 (ENSLACG00000015768) ENSLACG00000015582 ENSLACG00000015375 ENSLACG00000022626 HAS1 (ENSLACG00000013834) ENSLACG00000013526 ENSLACG00000013397 ENSLACG00000013268 Coelacanth MODERN SPECIES 1184 ENSLACG00000011935 ENSLACG00000011435 ENSLACG00000011071 ENSLACG00000010543 samhd1 (ENSLACG00000010024) ENSLACG00000009914 ENSLACG00000009424 samhd1 (ENSLACG00000009199) ENSLACG00000008137 ENSLACG00000007842 ENSLACG00000006714 ENSLACG00000006085 ENSLACG00000005910 ##22 ENSLACG00000005411 ##22 ENSLACG00000004370 ##22 ENSLACG00000002961 ##22 ENSLACG00000000467 Coelacanth MODERN SPECIES 1184 ENSLACG00000011935 ENSLACG00000011435 ENSLACG00000011071 ENSLACG00000010543 samhd1 (ENSLACG00000010024) ENSLACG00000009914 ENSLACG00000009424 samhd1 (ENSLACG00000009199) ENSLACG00000008137 ENSLACG00000007842 ENSLACG00000006714 ENSLACG00000006085 ENSLACG00000005910 ##22 ENSLACG00000005411 ##22 ENSLACG00000004370 ##22 ENSLACG00000002961 ##22 ENSLACG00000000467 Coelacanth MODERN SPECIES 4061 ENSLACG00000001185 ##22 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 492 PPP2R1A (ENSLACG00000011928) ENSLACG00000012582 ENSLACG00000013103 ENSLACG00000013268 ENSLACG00000013397 ENSLACG00000013526 HAS1 (ENSLACG00000013834) ENSLACG00000022626 ENSLACG00000015375 ENSLACG00000015582 SMG9 (ENSLACG00000015768) ENSLACG00000015917 ENSLACG00000016204 APOLD1 (ENSLACG00000016272) ENSLACG00000016344 ##22 ENSLACG00000016534 ##22 ENSLACG00000016583 ##22 ENSLACG00000016688 ENSLACG00000016792 ##22 Coelacanth MODERN SPECIES 492 ENSLACG00000016792 ##22 ENSLACG00000016688 ENSLACG00000016583 ##22 ENSLACG00000016534 ##22 ENSLACG00000016344 ##22 APOLD1 (ENSLACG00000016272) ENSLACG00000016204 ENSLACG00000015917 SMG9 (ENSLACG00000015768) ENSLACG00000015582 ENSLACG00000015375 ENSLACG00000022626 HAS1 (ENSLACG00000013834) ENSLACG00000013526 ENSLACG00000013397 ENSLACG00000013268 ENSLACG00000013103 ENSLACG00000012582 Coelacanth MODERN SPECIES 492 ENSLACG00000016792 ##22 ENSLACG00000016688 ENSLACG00000016583 ##22 ENSLACG00000016534 ##22 ENSLACG00000016344 ##22 APOLD1 (ENSLACG00000016272) ENSLACG00000016204 ENSLACG00000015917 SMG9 (ENSLACG00000015768) ENSLACG00000015582 ENSLACG00000015375 ENSLACG00000022626 HAS1 (ENSLACG00000013834) ENSLACG00000013526 ENSLACG00000013397 ENSLACG00000013268 ENSLACG00000013103 ENSLACG00000012582 PPP2R1A (ENSLACG00000011928) ENSLACG00000011331 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.a.b ##22 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 8 ENSECRG00000017610 ENSECRG00000017529 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 ENSECRG00000021555 ENSECRG00000021550 Reedfish MODERN SPECIES 8 ENSECRG00000017529 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 ENSECRG00000021555 ENSECRG00000021550 ENSECRG00000021529 Reedfish MODERN SPECIES 8 APLP1 (ENSECRG00000017714) ENSECRG00000017683 ENSECRG00000017610 ENSECRG00000017529 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 Reedfish MODERN SPECIES 8 ENSECRG00000017683 ENSECRG00000017610 ENSECRG00000017529 psenen (ENSECRG00000017498) hspb6 (ENSECRG00000017471) lin37 (ENSECRG00000017438) ENSECRG00000017408 ENSECRG00000017388 ENSECRG00000017376 ENSECRG00000017352 CTRL (ENSECRG00000017331) hsc70 (ENSECRG00000017172) ENSECRG00000017109 ENSECRG00000017042 ##22 IRGC (ENSECRG00000016775) ##22 IRGC (ENSECRG00000016725) ##22 IRGC (ENSECRG00000016706) ##22 IRGC (ENSECRG00000016688) ##22 ENSECRG00000016670 #22 ENSECRG00000016665 #22 SMG9 (ENSECRG00000016600) KCNN4 (ENSECRG00000016560) ENSECRG00000016522 has1 (ENSECRG00000016354) ENSECRG00000021641 ENSECRG00000021632 ENSECRG00000021596 ENSECRG00000021580 ENSECRG00000021575 ENSECRG00000021568 ENSECRG00000021555 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Sauria ANCESTRAL SPECIES 43 ENSGT00940000164395 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00940000161223 ENSGT00390000013102.f ENSGT00940000162297.h ENSGT00390000013102.e.a ENSGT01030000234555.a.a.b.b ENSGT00940000154265 ENSGT00940000162297.g ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b ENSGT00940000160115 Archelosauria ANCESTRAL SPECIES 48 ENSGT00940000164395 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00940000161223 ENSGT00390000013102.f ENSGT00940000162297.h ENSGT00390000013102.e.a ENSGT01030000234555.a.a.b.b ENSGT00940000154265.ac.a ENSGT00940000162297.g ENSGT00940000154265.bc ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b Cryptodira ANCESTRAL SPECIES 68 ENSGT00940000164395.c.a ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.e.b ENSGT00390000013102.e.a ENSGT01030000234555.a.a.b.b ENSGT00940000154265.ac.a ENSGT00940000162297.g ENSGT00940000154265.bc ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b Testudinoidea ANCESTRAL SPECIES 73 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT01010000227549 ENSGT00940000153599.B.a ENSGT01020000230438.B.b.b.a.i.b ENSGT01020000230438.B.a.a ENSGT00940000160803.l ENSGT00940000172339 ENSGT00940000159046.C ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 Emydidae ANCESTRAL SPECIES 115 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT01010000227549 ENSGT00940000153599.B.a ENSGT01020000230438.B.b.b.a.i.b ENSGT01020000230438.B.a.a ENSGT00940000160803.l ENSGT00940000159046.C ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00960000190411 Three-toed box turtle MODERN SPECIES 348 ENSTMTG00000004631 ##22 ZNF576 (ENSTMTG00000004638) ENSTMTG00000004652 ENSTMTG00000004664 ENSTMTG00000004714 ENSTMTG00000004770 RPS19 (ENSTMTG00000005011) ENSTMTG00000005052 ENSTMTG00000005255 ENSTMTG00000005348 painted turtle MODERN SPECIES 1075 ENSCPBG00000013088 ENSCPBG00000013089 ##22 ENSCPBG00000013092 ENSCPBG00000013096 LYPD3 (ENSCPBG00000013098) ENSCPBG00000013099 ENSCPBG00000013101 ENSCPBG00000013103 ENSCPBG00000013107 ETHE1 (ENSCPBG00000013116) XRCC1 (ENSCPBG00000013125) ENSCPBG00000013130 ENSCPBG00000013132 ENSCPBG00000013135 ##22 ENSCPBG00000013137 ##22 ZNF576 (ENSCPBG00000013139) ENSCPBG00000013141 ENSCPBG00000013143 Testudinidae ANCESTRAL SPECIES 85 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT01010000227549 ENSGT00940000153599.B.a ENSGT01020000230438.B.b.b.a.i.b ENSGT01020000230438.B.a.a ENSGT00940000160803.l ENSGT00940000172339 ENSGT00940000159046.C ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00960000190411 ENSGT00940000154265.bc.a.a.b.b ENSGT00940000154265.ac.a.c ENSGT01030000234555.a.a.b.b ENSGT00390000013102.e.a ENSGT00940000161223 ENSGT00950000185295 Abingdon island giant tortoise MODERN SPECIES 2699 ENSCABG00000012254 ENSCABG00000012255 ENSCABG00000012256 ENSCABG00000012258 ENSCABG00000012260 ENSCABG00000012263 ENSCABG00000012279 ENSCABG00000012330 ##22 ENSCABG00000012332 ##22 ENSCABG00000012334 Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005016958 ENSGEVG00005016973 ##22 ENSGEVG00005016995 ENSGEVG00005017031 ENSGEVG00005017046 LYPD3 (ENSGEVG00005017069) ENSGEVG00005017101 ENSGEVG00005017110 ENSGEVG00005017130 ENSGEVG00005017155 ETHE1 (ENSGEVG00005017180) ENSGEVG00005017202 XRCC1 (ENSGEVG00005017222) ENSGEVG00005017252 ##22 ENSGEVG00005017257 ENSGEVG00005017264 ##22 ENSGEVG00005017282 ENSGEVG00005017306 ENSGEVG00005017373 ENSGEVG00005017498 CADM4 (ENSGEVG00005017512) ENSGEVG00005017527 ENSGEVG00005017544 ENSGEVG00005017604 ENSGEVG00005012802 ENSGEVG00005012850 ENSGEVG00005012863 ENSGEVG00005012907 ENSGEVG00005013000 PAFAH1B3 (ENSGEVG00005013045) ERF (ENSGEVG00005013248) Lepidosauria ANCESTRAL SPECIES 51 ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT01030000235778 ENSGT00390000003568 ENSGT00940000164395 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.f ENSGT01030000234555.a.a.b.b tuatara DUPLICATION tuatara MODERN SPECIES 1580 ENSSPUG00000015920 ##22 ENSSPUG00000015934 ##22 ZNF576 (ENSSPUG00000015942) ENSSPUG00000015950 CADM4 (ENSSPUG00000015976) RPS19 (ENSSPUG00000016051) ENSSPUG00000016105 ENSSPUG00000016251 ##22 ENSSPUG00000016293 ENSSPUG00000016498 ENSSPUG00000016510 ENSSPUG00000016520 PAFAH1B3 (ENSSPUG00000016531) ENSSPUG00000016538 ENSSPUG00000016548 ERF (ENSSPUG00000016555) GSK3A (ENSSPUG00000016559) tuatara MODERN SPECIES 50 XRCC1 (ENSSPUG00000015888) ETHE1 (ENSSPUG00000015962) ENSSPUG00000016155 ENSSPUG00000016161 ENSSPUG00000016168 ENSSPUG00000016175 ENSSPUG00000016179 ENSSPUG00000016190 ENSSPUG00000016207 ENSSPUG00000016212 ##22 ENSSPUG00000016215 ##22 ENSSPUG00000016218 SMG9 (ENSSPUG00000016223) KCNN4 (ENSSPUG00000016247) ENSSPUG00000016264 ENSSPUG00000016274 ENSSPUG00000016285 ENSSPUG00000016290 PPP2R1A (ENSSPUG00000016300) ENSSPUG00000016307 ENSSPUG00000016311 ENSSPUG00000016320 ENSSPUG00000016331 ENSSPUG00000016337 ENSSPUG00000016344 Episquamata ANCESTRAL SPECIES 7 ENSGT01030000234540.B.b.a.b ENSGT00940000154757 ENSGT00950000183007.a.a.b.eb ##22 ENSGT00950000183007.b.i.a.b ##22 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b ENSGT00940000160115 ENSGT00940000161799 ENSGT00940000158852 ENSGT00960000189159 ENSGT00940000160476.b ENSGT00390000010549 ENSGT00940000154265.yb ENSGT00940000162297.g ENSGT00940000154265.`c ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Toxicofera ANCESTRAL SPECIES 34 ENSGT01030000235778 ENSGT00390000003568 ENSGT00940000164395.a.a.b.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00940000163304.b.a.a ENSGT00730000113550 ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 Elapidae ANCESTRAL SPECIES 9 ENSGT01020000230438.B.a.a.bb.b ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b ENSGT00940000160115 ENSGT00940000161799 ENSGT00940000158852 ENSGT00960000189159 ENSGT00940000160476.b ENSGT00390000010549 ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.f ENSGT01030000234555.a.a.b.b ENSGT00940000154265.`c ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00940000161180 ENSGT00940000154363.A ENSGT01100000263489.a.a.b.b.c.a ENSGT00940000158211 ENSGT00950000185905 ENSGT00940000163576 ENSGT00940000153981.B Elapidae_a ANCESTRAL SPECIES 33 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a.bb.a ENSGT01020000230438.B.a.a.bb.b ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.f ENSGT01030000234555.a.a.b.b ENSGT00940000154265.`c ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00940000161180 ENSGT00940000154363.A ENSGT01100000263489.a.a.b.b.c.a ENSGT00940000158211 ENSGT00950000185905 ENSGT00940000163576 ENSGT00940000153981.B Acanthophiinae ANCESTRAL SPECIES 32 ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a.bb.a ENSGT01020000230438.B.a.a.bb.b ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00990000208224.a ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.f ENSGT01030000234555.a.a.b.b ENSGT00940000154265.`c ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b ENSGT00940000161799 ENSGT00940000158852 ENSGT00960000189159 ENSGT00940000160476.b Eastern brown snake MODERN SPECIES 77 ENSPTXG00000013281 ENSPTXG00000013280 ENSPTXG00000013279 ##22 ENSPTXG00000013278 ##22 ENSPTXG00000013276 CADM4 (ENSPTXG00000019143) RPS19 (ENSPTXG00000019142) ENSPTXG00000019140 PAFAH1B3 (ENSPTXG00000019138) CIC (ENSPTXG00000019136) ENSPTXG00000019134 GSK3A (ENSPTXG00000019133) ZNF526 (ENSPTXG00000019131) DEDD2 (ENSPTXG00000019130) ZNF574 (ENSPTXG00000019128) GRIK5 (ENSPTXG00000019124) ENSPTXG00000019122 ENSPTXG00000019102 RABAC1 (ENSPTXG00000019099) Mainland tiger snake MODERN SPECIES 155 ENSNSUG00000009792 ##22 ENSNSUG00000009793 LYPD3 (ENSNSUG00000009796) ENSNSUG00000009797 ENSNSUG00000009798 ETHE1 (ENSNSUG00000009800) XRCC1 (ENSNSUG00000009801) ENSNSUG00000009802 ENSNSUG00000009803 ENSNSUG00000009804 ##22 ENSNSUG00000009805 ##22 ENSNSUG00000009807 CADM4 (ENSNSUG00000009808) RPS19 (ENSNSUG00000009809) ENSNSUG00000009810 GBP6 (ENSNSUG00000009811) CIC (ENSNSUG00000009812) ENSNSUG00000009813 GSK3A (ENSNSUG00000009814) ZNF526 (ENSNSUG00000009825) DEDD2 (ENSNSUG00000009826) ZNF574 (ENSNSUG00000009827) GRIK5 (ENSNSUG00000009828) ATP1A3 (ENSNSUG00000009829) ENSNSUG00000009871 ENSNSUG00000009872 Blue-lipped sea krait MODERN SPECIES 5246 ENSLLTG00000006018 ##22 ENSLLTG00000006012 ##22 Indian cobra MODERN SPECIES 11 ENSNNAG00000003672 ENSNNAG00000003685 ENSNNAG00000003701 ##22 ENSNNAG00000003711 ENSNNAG00000003728 LYPD3 (ENSNNAG00000003743) ENSNNAG00000003756 ENSNNAG00000003769 ENSNNAG00000003780 XRCC1 (ENSNNAG00000003829) ENSNNAG00000004107 ENSNNAG00000004130 ENSNNAG00000004164 ENSNNAG00000004169 ENSNNAG00000004196 ##22 ENSNNAG00000004215 ##22 ENSNNAG00000004229 CADM4 (ENSNNAG00000004262) ENSNNAG00000004297 ENSNNAG00000004342 ENSNNAG00000004375 ENSNNAG00000004452 PAFAH1B3 (ENSNNAG00000004692) CIC (ENSNNAG00000004736) ENSNNAG00000005013 GSK3A (ENSNNAG00000005075) DEDD2 (ENSNNAG00000005193) ENSNNAG00000005224 ENSNNAG00000005281 ZNF574 (ENSNNAG00000005293) GRIK5 (ENSNNAG00000005420) Laterata ANCESTRAL SPECIES 17 ENSGT00940000164395.b ENSGT00940000164395.a.a.b.b ENSGT00950000183007.a.a.a.b ##22 ENSGT00950000183206.a.b.a.b ENSGT00940000153599.A ENSGT00940000153599.B.a ENSGT01020000230438.B.a.a ENSGT00940000160803 ENSGT00940000159046.C ENSGT00940000162551 ENSGT00390000004140.a ENSGT00940000163304.b.a.a ENSGT00730000113550 ENSGT00950000183007.a.a.a.a ##22 ENSGT00950000183007.a.b ##22 ENSGT00730000111407 ENSGT00960000190411 ENSGT00950000185295 ENSGT00940000161223 ENSGT00390000013102.e.b ENSGT00940000154265.yb ENSGT00940000162297.g.f ENSGT00940000154265.`c.d ENSGT00940000154265.`c.c.a ENSGT00940000162297.g.e.a ENSGT00940000154265.`c.c.b ENSGT00940000162297.g.e.b ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Common wall lizard MODERN SPECIES 16 XRCC1 (ENSPMRG00000009083) ENSPMRG00000009072 ENSPMRG00000009068 ENSPMRG00000009059 ENSPMRG00000009047 ENSPMRG00000009043 ENSPMRG00000009036 ENSPMRG00000009030 ENSPMRG00000009021 ENSPMRG00000009020 ENSPMRG00000009006 ENSPMRG00000009002 ENSPMRG00000008996 ENSPMRG00000008989 ENSPMRG00000008986 ##22 ENSPMRG00000008976 ##22 ZNF576 (ENSPMRG00000008963) ENSPMRG00000008960 ENSPMRG00000008952 CADM4 (ENSPMRG00000008941) RPS19 (ENSPMRG00000008934) ENSPMRG00000008923 ENSPMRG00000008921 ENSPMRG00000008916 ENSPMRG00000008910 ENSPMRG00000008907 ENSPMRG00000008905 ENSPMRG00000008898 ENSPMRG00000008894 ENSPMRG00000008878 ENSPMRG00000008783 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 59 ENSSMRG00000005488 ##22 ENSSMRG00000005499 ##22 ENSSMRG00000005514 ENSSMRG00000005526 ENSSMRG00000005529 ##22 ENSSMRG00000005530 ENSSMRG00000005545 LYPD3 (ENSSMRG00000005556) ENSSMRG00000005560 ENSSMRG00000005562 PHLDB3 (ENSSMRG00000005565) ETHE1 (ENSSMRG00000005572) ZNF575 (ENSSMRG00000005573) XRCC1 (ENSSMRG00000005576) ENSSMRG00000005585 ##22 ENSSMRG00000005586 ##22 ZNF576 (ENSSMRG00000005588) ENSSMRG00000005593 ENSSMRG00000005595 CADM4 (ENSSMRG00000005596) ENSSMRG00000005627 ENSSMRG00000005631 ENSSMRG00000005772 ENSSMRG00000005788 ENSSMRG00000005804 ENSSMRG00000005805 ENSSMRG00000005806 ENSSMRG00000005807 ENSSMRG00000005808 ENSSMRG00000005822 PAFAH1B3 (ENSSMRG00000005828) Argentine black and white tegu MODERN SPECIES 267 ENSSMRG00000013748 ##22 ENSSMRG00000013749 ##22 ENSSMRG00000013750 Mammalia ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Platypus DUPLICATION Platypus MODERN SPECIES 88 ENSOANG00000031432 ENSOANG00000038426 B4GALT1 (ENSOANG00000039932) SMU1 (ENSOANG00000009876) DNAJA1 (ENSOANG00000009877) ENSOANG00000009878 ELP1 (ENSOANG00000009880) TBC1D2 (ENSOANG00000009884) IFN3 (ENSOANG00000039494) ifn2 (ENSOANG00000046066) ENSOANG00000037662 ifn1 (ENSOANG00000047186) ifn2 (ENSOANG00000038666) ENSOANG00000021317 ENSOANG00000001818 ENSOANG00000001820 ##22 ENSOANG00000001821 ##22 MLP (ENSOANG00000002104) ENSOANG00000029458 ENSOANG00000001863 RACK1 (ENSOANG00000002600) ENSOANG00000047404 TRIM7 (ENSOANG00000050924) ENSOANG00000048213 BTNL9 (ENSOANG00000003412) ENSOANG00000040454 ENSOANG00000037868 ENSOANG00000006413 ENSOANG00000019848 ENSOANG00000031512 ENSOANG00000048937 Platypus MODERN SPECIES 88 ENSOANG00000013368 ENSOANG00000048937 ENSOANG00000031512 ENSOANG00000019848 ENSOANG00000006413 ENSOANG00000037868 ENSOANG00000040454 BTNL9 (ENSOANG00000003412) ENSOANG00000048213 TRIM7 (ENSOANG00000050924) ENSOANG00000047404 RACK1 (ENSOANG00000002600) ENSOANG00000001863 ENSOANG00000029458 MLP (ENSOANG00000002104) ENSOANG00000001821 ##22 ENSOANG00000001820 ##22 ENSOANG00000001818 ENSOANG00000021317 ifn2 (ENSOANG00000038666) ifn1 (ENSOANG00000047186) ENSOANG00000037662 ifn2 (ENSOANG00000046066) IFN3 (ENSOANG00000039494) TBC1D2 (ENSOANG00000009884) ELP1 (ENSOANG00000009880) ENSOANG00000009878 DNAJA1 (ENSOANG00000009877) SMU1 (ENSOANG00000009876) B4GALT1 (ENSOANG00000039932) ENSOANG00000038426 Theria DUPLICATION Theria DUPLICATION Theria DUPLICATION Theria ANCESTRAL SPECIES 232 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Marsupialia ANCESTRAL SPECIES 167 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Opossum MODERN SPECIES 1 DUSP28 (ENSMODG00000013459) PARL (ENSMODG00000013457) ENSMODG00000025711 YEATS2 (ENSMODG00000013446) KLHL24 (ENSMODG00000013433) ENSMODG00000013426 SCIMP (ENSMODG00000038553) IFT22 (ENSMODG00000013419) COL26A1 (ENSMODG00000023131) ENSMODG00000013409 ADIPOQ (ENSMODG00000013406) ST6GAL1 (ENSMODG00000013313) DNAJB11 (ENSMODG00000013307) TBCCD1 (ENSMODG00000013298) CRYGS (ENSMODG00000013295) ENSMODG00000013291 ##22 DGKG (ENSMODG00000023132) ETV5 (ENSMODG00000013273) ENSMODG00000039909 ENSMODG00000036464 ENSMODG00000048684 TRA2B (ENSMODG00000013248) ENSMODG00000037655 SPATC1L (ENSMODG00000008502) LSS (ENSMODG00000008489) MCM3AP (ENSMODG00000008187) YBEY (ENSMODG00000008458) ENSMODG00000046878 ENSMODG00000008392 DIP2A (ENSMODG00000008324) ENSMODG00000008071 Marsupialia_b ANCESTRAL SPECIES 128 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00390000013063 ENSGT00530000063947.B ENSGT00940000156789 ENSGT00940000154345.a ENSGT00940000154345.b ENSGT00390000007003 ENSGT00390000013187 ENSGT00940000161716 ENSGT00940000162000.d.a.a.b.a ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000156768 ENSGT00940000160680 ENSGT00940000163340 ENSGT00950000183009.bb ENSGT00940000154913 ENSGT00940000154951 ENSGT00940000156285 ENSGT00940000162528 ENSGT00940000158216 ENSGT00940000158585.d.a ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00940000158024.C ENSGT00940000164132.a Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000013063 ENSGT00530000063947.B ENSGT00940000156789 ENSGT00940000154345.a ENSGT00940000154345.b ENSGT00390000007003 ENSGT00390000013187 ENSGT00940000161716 ENSGT00940000162000.d.a.a.b.a ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000156768 ENSGT00940000160680 ENSGT00940000163340 ENSGT00950000183009.bb ENSGT00940000154913 ENSGT00940000154951 ENSGT00940000156285 ENSGT00940000162528 ENSGT00940000158216 ENSGT00940000158585.d.a ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00940000158024.C ENSGT00940000164132.a koala MODERN SPECIES 109 PARL (ENSPCIG00000017778) MAP6D1 (ENSPCIG00000017777) YEATS2 (ENSPCIG00000017776) KLHL24 (ENSPCIG00000017775) ENSPCIG00000017774 KLHL6 (ENSPCIG00000017773) IFT22 (ENSPCIG00000017772) ENSPCIG00000017771 ENSPCIG00000025911 ADIPOQ (ENSPCIG00000025906) ST6GAL1 (ENSPCIG00000025903) DNAJB11 (ENSPCIG00000001393) TBCCD1 (ENSPCIG00000025901) CRYGS (ENSPCIG00000025898) ENSPCIG00000025897 ##22 ENSPCIG00000025896 ##22 ENSPCIG00000025890 ENSPCIG00000036362 ETV5 (ENSPCIG00000025881) ENSPCIG00000036870 ENSPCIG00000037087 TRA2B (ENSPCIG00000008592) IGF2BP2 (ENSPCIG00000023547) SENP2 (ENSPCIG00000002272) ENSPCIG00000002267 LIPH (ENSPCIG00000035364) MAP3K13 (ENSPCIG00000002208) ENSPCIG00000003983 EHHADH (ENSPCIG00000032050) C3orf70 (ENSPCIG00000036991) VPS8 (ENSPCIG00000006665) Eutheria ANCESTRAL SPECIES 235 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Xenarthra ANCESTRAL SPECIES 393 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b Armadillo DUPLICATION Armadillo MODERN SPECIES 2556 ENSDNOG00000036141 ##22 ENSDNOG00000047478 ##22 ENSDNOG00000046683 ##22 ENSDNOG00000045232 ##22 ENSDNOG00000037309 ##22 ENSDNOG00000040435 TRIM52 (ENSDNOG00000042088) RACK1 (ENSDNOG00000000767) TRIM41 (ENSDNOG00000000765) TRIM7 (ENSDNOG00000036990) ENSDNOG00000049195 ENSDNOG00000032410 ENSDNOG00000015279 Armadillo MODERN SPECIES 3209 ENSDNOG00000003574 ENSDNOG00000041589 ##22 ENSDNOG00000033813 ##22 ENSDNOG00000034249 ##22 Sloth MODERN SPECIES 13265 ENSCHOG00000005921 ##22 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b ENSGT01100000263548.b.a.a.a.b.b Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b ENSGT00940000163029 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.a.a ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B Laurasiatheria_b ANCESTRAL SPECIES 44 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Carnivora ANCESTRAL SPECIES 33 ENSGT00940000154294.k.a.a.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Caniformia ANCESTRAL SPECIES 5 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00940000163029 ENSGT00940000159358 ENSGT00420000029848.A ENSGT00900000143807 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 Caniformia_b ANCESTRAL SPECIES 59 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 51 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Ursus ANCESTRAL SPECIES 149 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 ENSGT00940000162750 ENSGT01030000234553.b.b.d.c.a.c.a Polar bear MODERN SPECIES 495 ENSUMAG00000009719 ##22 ENSUMAG00000009716 ##22 ENSUMAG00000009713 ##22 ENSUMAG00000009703 TRIM52 (ENSUMAG00000009699) RACK1 (ENSUMAG00000009689) TRIM41 (ENSUMAG00000009686) TRIM7 (ENSUMAG00000009682) ENSUMAG00000009676 ENSUMAG00000009674 ENSUMAG00000009673 ENSUMAG00000009671 ENSUMAG00000009669 ENSUMAG00000009668 ENSUMAG00000009664 ZFP62 (ENSUMAG00000009655) American black bear MODERN SPECIES 7634 ENSUAMG00000012493 ##22 Giant Panda MODERN SPECIES 307 ENSAMEG00000003457 ##22 ENSAMEG00000029214 ##22 ENSAMEG00000024394 ##22 ENSAMEG00000030403 ##22 Ursidae ANCESTRAL SPECIES 51 ENSGT01090000259995.b.a.a.b.h ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.b.b ENSGT00960000186612.A.j.a.a Ursus ANCESTRAL SPECIES 259 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.a.b.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.a Polar bear MODERN SPECIES 390 ENSUMAG00000025023 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025018 ##22 ENSUMAG00000025017 ENSUMAG00000025016 ENSUMAG00000025015 American black bear MODERN SPECIES 2866 ENSUAMG00000013623 ##22 ENSUAMG00000013638 ##22 ENSUAMG00000013639 ##22 ENSUAMG00000013643 ##22 ENSUAMG00000013669 Giant Panda MODERN SPECIES 13 ENSAMEG00000019261 ENSAMEG00000015004 ENSAMEG00000020052 ENSAMEG00000015006 BTNL9 (ENSAMEG00000015008) ENSAMEG00000029392 TRIM7 (ENSAMEG00000029192) TRIM41 (ENSAMEG00000000005) ENSAMEG00000000004 ENSAMEG00000000003 ENSAMEG00000025627 ENSAMEG00000001281 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000014070 ##22 ENSAMEG00000019860 ENSAMEG00000026408 ENSAMEG00000026034 ENSAMEG00000027968 ENSAMEG00000019809 ENSAMEG00000027505 ENSAMEG00000000974 ENSAMEG00000000972 ENSAMEG00000026585 CNOT6 (ENSAMEG00000000949) GFPT2 (ENSAMEG00000000889) MAPK9 (ENSAMEG00000000853) RASGEF1C (ENSAMEG00000000806) Mustelinae ANCESTRAL SPECIES 152 ENSGT00390000018500.a ENSGT00940000161175 ENSGT00940000162327 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 American mink DUPLICATION American mink MODERN SPECIES 980 ENSNVIG00000007432 ##22 American mink MODERN SPECIES 546 ENSNVIG00000007271 ENSNVIG00000007247 TRIM7 (ENSNVIG00000007179) TRIM41 (ENSNVIG00000007141) ENSNVIG00000007124 TRIM52 (ENSNVIG00000007117) ENSNVIG00000007097 ENSNVIG00000007046 ##22 ENSNVIG00000007034 ##22 Canidae ANCESTRAL SPECIES 9 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000160338 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00940000153253.b.a.h ENSGT00940000159358 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a Red fox DUPLICATION Red fox MODERN SPECIES 281 ENSVVUG00000026929 ##22 ENSVVUG00000026930 ##22 ENSVVUG00000026931 ##22 ENSVVUG00000026932 ##22 ENSVVUG00000026936 FLT4 (ENSVVUG00000026937) CNOT6 (ENSVVUG00000026940) ENSVVUG00000026942 GFPT2 (ENSVVUG00000026945) MAPK9 (ENSVVUG00000026948) RASGEF1C (ENSVVUG00000026954) Red fox MODERN SPECIES 302 MGAT1 (ENSVVUG00000002865) SNRPG (ENSVVUG00000002858) ZFP62 (ENSVVUG00000002852) ENSVVUG00000002843 BTNL9 (ENSVVUG00000002828) ENSVVUG00000002822 ENSVVUG00000002817 TRIM7 (ENSVVUG00000002810) TRIM41 (ENSVVUG00000002803) RACK1 (ENSVVUG00000002788) ENSVVUG00000002784 ##22 ENSVVUG00000002750 ##22 ENSVVUG00000002740 ##22 Canis_lupus ANCESTRAL SPECIES 15 ENSGT00530000063632.B ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000160338 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01050000245376.a.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00940000153253.b.a.h ENSGT00940000159358 ENSGT00940000158978 ENSGT00950000182802.A.bb ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 Dog MODERN SPECIES 2 ENSCAFG00845005305 ENSCAFG00845005321 BTNL9 (ENSCAFG00845005351) OR2T26 (ENSCAFG00845005372) ENSCAFG00845005382 TRIM7 (ENSCAFG00845005395) TRIM41 (ENSCAFG00845005431) RACK1 (ENSCAFG00845005488) ENSCAFG00845005544 ENSCAFG00845005562 ENSCAFG00845005580 ##22 ENSCAFG00845005606 ENSCAFG00845005621 IFGGC1 (ENSCAFG00845005668) ##22 ENSCAFG00845005718 ##22 IFGGB2 (ENSCAFG00845005769) ##22 ENSCAFG00845005800 ##22 ENSCAFG00845005821 ENSCAFG00845005841 ENSCAFG00845006015 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006420 GFPT2 (ENSCAFG00845006488) MAPK9 (ENSCAFG00845006710) RASGEF1C (ENSCAFG00845006880) RNF130 (ENSCAFG00845007023) TBC1D9B (ENSCAFG00845007248) ENSCAFG00845007488 SQSTM1 (ENSCAFG00845007599) Dingo MODERN SPECIES 238 MGAT1 (ENSCAFG00020002161) ENSCAFG00020002169 ENSCAFG00020002171 ENSCAFG00020002179 ENSCAFG00020002183 ENSCAFG00020002186 TRIM7 (ENSCAFG00020002191) TRIM41 (ENSCAFG00020002200) RACK1 (ENSCAFG00020002209) TRIM52 (ENSCAFG00020002225) ENSCAFG00020002229 ##22 ENSCAFG00020002248 ##22 ENSCAFG00020002291 ENSCAFG00020002301 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002403 ##22 ENSCAFG00020002411 FLT4 (ENSCAFG00020002415) CNOT6 (ENSCAFG00020002441) ENSCAFG00020002541 ENSCAFG00020002544 GFPT2 (ENSCAFG00020002548) MAPK9 (ENSCAFG00020002569) RASGEF1C (ENSCAFG00020002586) RNF130 (ENSCAFG00020002599) TBC1D9B (ENSCAFG00020002609) MRNIP (ENSCAFG00020002630) SQSTM1 (ENSCAFG00020002634) MGAT4B (ENSCAFG00020002640) Artiodactyla ANCESTRAL SPECIES 28 ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT01090000259995.a.a.b.a.b.a ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b Artiodactyla_a ANCESTRAL SPECIES 30 ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 ENSGT01090000260045.C.e.a.b ENSGT01090000260086.C.a.a ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b Artiodactyla_b ANCESTRAL SPECIES 31 ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 ENSGT01090000260045.C.e.a.b ENSGT01090000260086.C.a.a ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b Cetacea ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00390000003207 ENSGT00940000159972 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000161967 ENSGT00940000162415 ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01090000259995.a.a.a ENSGT00730000111648 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263552.g.b.a.a ENSGT00940000161175 ENSGT00940000162327 ENSGT01090000259995.a.a.b.a.a.a.a Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00390000003207 ENSGT00940000159972 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000161967 ENSGT00940000162415 ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT00730000111648 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263552.g.b.a.a ENSGT00940000161175 ENSGT00940000162327 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000160371 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00390000003207 ENSGT00940000159972 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT00730000111648 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263552.g.b.a.a ENSGT00940000161175 ENSGT00940000162327 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000160371 ENSGT00940000162155 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000153092.a.a.c.b Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00390000003207 ENSGT00940000159972 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT00730000111648 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263552.g.b.a.a ENSGT00940000161175 ENSGT00940000162327 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000160371 ENSGT00940000162155 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000153092.a.a.c.b Monodontidae ANCESTRAL SPECIES 17 ENSGT00940000154227.b ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00390000003207 ENSGT00940000159972 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000161967 ENSGT00940000162415 Beluga whale MODERN SPECIES 27 ENSDLEG00000006349 ILVBL (ENSDLEG00000006337) SYDE1 (ENSDLEG00000006330) CCDC105 (ENSDLEG00000006325) SLC1A6 (ENSDLEG00000006317) MGAT1 (ENSDLEG00000006314) ZFP62 (ENSDLEG00000006310) BTNL9 (ENSDLEG00000006307) ENSDLEG00000006302 ENSDLEG00000006298 TRIM7 (ENSDLEG00000006294) TRIM41 (ENSDLEG00000006284) RACK1 (ENSDLEG00000006233) TRIM52 (ENSDLEG00000006217) ENSDLEG00000006210 ENSDLEG00000006205 ##22 ENSDLEG00000006198 ZNF496 (ENSDLEG00000006189) NLRP3 (ENSDLEG00000006183) TMEM183A (ENSDLEG00000006175) PPFIA4 (ENSDLEG00000006102) MYOG (ENSDLEG00000006080) ADORA1 (ENSDLEG00000006076) MYBPH (ENSDLEG00000006056) CHI3L1 (ENSDLEG00000006019) ENSDLEG00000006009 BTG2 (ENSDLEG00000006002) FMOD (ENSDLEG00000005997) PRELP (ENSDLEG00000005993) OPTC (ENSDLEG00000005985) ATP2B4 (ENSDLEG00000005910) Narwhal MODERN SPECIES 298 ENSMMNG00015004146 ILVBL (ENSMMNG00015004159) SYDE1 (ENSMMNG00015004186) CCDC105 (ENSMMNG00015004201) SLC1A6 (ENSMMNG00015004232) MGAT1 (ENSMMNG00015004274) ZFP62 (ENSMMNG00015004280) BTNL9 (ENSMMNG00015004303) ENSMMNG00015004330 ENSMMNG00015004340 TRIM7 (ENSMMNG00015004356) TRIM41 (ENSMMNG00015004371) RACK1 (ENSMMNG00015004400) TRIM52 (ENSMMNG00015004440) ENSMMNG00015004450 ENSMMNG00015004458 ##22 ZNF496 (ENSMMNG00015004467) ENSMMNG00015004475 NLRP3 (ENSMMNG00015004497) Vaquita MODERN SPECIES 14 ENSPSNG00000002701 ILVBL (ENSPSNG00000002775) SYDE1 (ENSPSNG00000002802) OR1I1 (ENSPSNG00000002820) CCDC105 (ENSPSNG00000002845) SLC1A6 (ENSPSNG00000002916) MGAT1 (ENSPSNG00000002989) ZFP62 (ENSPSNG00000003006) BTNL9 (ENSPSNG00000003070) ENSPSNG00000003144 TRIM7 (ENSPSNG00000003205) TRIM41 (ENSPSNG00000003237) RACK1 (ENSPSNG00000003303) TRIM52 (ENSPSNG00000003388) ENSPSNG00000003401 ENSPSNG00000003415 ##22 ZNF496 (ENSPSNG00000003432) NLRP3 (ENSPSNG00000003471) TRIM58 (ENSPSNG00000003501) ENSPSNG00000003536 LYPD8 (ENSPSNG00000003552) ENSPSNG00000003568 SH3BP5L (ENSPSNG00000003579) ENSPSNG00000003603 ZNF692 (ENSPSNG00000003614) PGBD2 (ENSPSNG00000003638) ENSPSNG00000003658 TRIM11 (ENSPSNG00000003681) TRIM17 (ENSPSNG00000003706) ENSPSNG00000003725 H2AC25 (ENSPSNG00000003735) Sperm whale MODERN SPECIES 11 BRD4 (ENSPCTG00005006255) EPHX3 (ENSPCTG00005006204) NOTCH3 (ENSPCTG00005006085) ENSPCTG00005006050 ILVBL (ENSPCTG00005005985) SYDE1 (ENSPCTG00005005955) CCDC105 (ENSPCTG00005005936) SLC1A6 (ENSPCTG00005005809) MGAT1 (ENSPCTG00005005785) ZFP62 (ENSPCTG00005005773) ENSPCTG00005002251 ENSPCTG00005002242 ENSPCTG00005002234 TRIM52 (ENSPCTG00005002211) RACK1 (ENSPCTG00005002140) ENSPCTG00005002121 ##22 ZNF496 (ENSPCTG00005002110) NLRP3 (ENSPCTG00005002070) GCSAML (ENSPCTG00005002039) ENSPCTG00005002026 OR2G2 (ENSPCTG00005002019) ENSPCTG00005002014 TRIM58 (ENSPCTG00005002006) ENSPCTG00005001987 LYPD8 (ENSPCTG00005001972) SH3BP5L (ENSPCTG00005001958) ZNF672 (ENSPCTG00005001950) ZNF692 (ENSPCTG00005001942) PGBD2 (ENSPCTG00005001930) ENSPCTG00005001917 TRIM11 (ENSPCTG00005001906) Blue whale MODERN SPECIES 14 BRD4 (ENSBMSG00010001216) EPHX3 (ENSBMSG00010001163) NOTCH3 (ENSBMSG00010001081) ILVBL (ENSBMSG00010001043) SYDE1 (ENSBMSG00010001024) CCDC105 (ENSBMSG00010001004) SLC1A6 (ENSBMSG00010000967) MGAT1 (ENSBMSG00010000905) ZFP62 (ENSBMSG00010000889) BTNL9 (ENSBMSG00010000859) TRIM7 (ENSBMSG00010000810) TRIM41 (ENSBMSG00010000788) RACK1 (ENSBMSG00010000709) TRIM52 (ENSBMSG00010000670) ENSBMSG00010000660 ENSBMSG00010000645 ##22 ZNF496 (ENSBMSG00010000617) NLRP3 (ENSBMSG00010000594) ENSBMSG00010000580 GCSAML (ENSBMSG00010000539) ENSBMSG00010000519 OR2G2 (ENSBMSG00010000510) ENSBMSG00010000495 ENSBMSG00010000469 TRIM58 (ENSBMSG00010000440) ENSBMSG00010000428 ENSBMSG00010000389 ENSBMSG00010000371 LYPD8 (ENSBMSG00010000338) SH3BP5L (ENSBMSG00010000308) ENSBMSG00010000289 Pecora ANCESTRAL SPECIES ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.a.h ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Yarkand deer MODERN SPECIES 32 ENSCHYG00000005472 ENSCHYG00000005456 OR14K1 (ENSCHYG00000005430) OR6F1 (ENSCHYG00000005411) OR13G1 (ENSCHYG00000005396) ENSCHYG00000005347 OR2G3 (ENSCHYG00000005322) OR2G2 (ENSCHYG00000005303) GCSAML (ENSCHYG00000005264) OR2C3 (ENSCHYG00000005238) ENSCHYG00000005207 OR2B11 (ENSCHYG00000005188) ENSCHYG00000005152 NLRP3 (ENSCHYG00000005103) ZNF496 (ENSCHYG00000005058) ENSCHYG00000005053 ##22 ENSCHYG00000005020 ENSCHYG00000003501 TRIM41 (ENSCHYG00000003436) TRIM7 (ENSCHYG00000003403) ENSCHYG00000003390 ENSCHYG00000003349 ENSCHYG00000003343 ENSCHYG00000003334 ENSCHYG00000003321 ENSCHYG00000003313 ENSCHYG00000003310 BTNL9 (ENSCHYG00000003294) ZFP62 (ENSCHYG00000003282) MGAT1 (ENSCHYG00000003276) OR2Y1 (ENSCHYG00000003269) Percora_a ANCESTRAL SPECIES ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.a.h ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Bovidae ANCESTRAL SPECIES ENSGT01050000244828.c.b.a ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES 3 ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a.d ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00390000016694.j ENSGT01090000259995.a.a.b.a.b.a ENSGT00950000183007.a.b.g.a.a.i ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b Goat MODERN SPECIES 26 OR6F1 (ENSCHIG00000012565) OR13G1 (ENSCHIG00000004024) ENSCHIG00000012281 ENSCHIG00000018860 OR2G3 (ENSCHIG00000010997) ENSCHIG00000003268 GCSAML (ENSCHIG00000013826) ENSCHIG00000026010 ENSCHIG00000020778 ENSCHIG00000008976 OR2B11 (ENSCHIG00000011822) NLRP3 (ENSCHIG00000023246) ZNF496 (ENSCHIG00000016046) ENSCHIG00000001018 ENSCHIG00000006767 ##22 ENSCHIG00000013605 ##22 ENSCHIG00000016951 TRIM52 (ENSCHIG00000022440) ENSCHIG00000015585 TRIM41 (ENSCHIG00000001532) TRIM7 (ENSCHIG00000025933) ENSCHIG00000006546 ENSCHIG00000006352 ENSCHIG00000007855 ENSCHIG00000009493 BTNL9 (ENSCHIG00000022970) ZFP62 (ENSCHIG00000010843) MGAT1 (ENSCHIG00000009572) OR2Y1 (ENSCHIG00000010557) ENSCHIG00000009729 ENSCHIG00000009801 Rambouillet Sheep MODERN SPECIES 21 ENSOARG00020014463 TMED9 (ENSOARG00020014531) B4GALT7 (ENSOARG00020014566) N4BP3 (ENSOARG00020014685) RMND5B (ENSOARG00020014725) NHP2 (ENSOARG00020014789) HNRNPAB (ENSOARG00020014857) PHYKPL (ENSOARG00020014997) COL23A1 (ENSOARG00020015159) CLK4 (ENSOARG00020015589) ZNF354A (ENSOARG00020015770) PROP1 (ENSOARG00020015839) OR2Y1 (ENSOARG00020015890) MGAT1 (ENSOARG00020015909) ZFP62 (ENSOARG00020015927) ENSOARG00020015939 ##22 BTNL9 (ENSOARG00020015996) ENSOARG00020016085 ENSOARG00020016130 ENSOARG00020016158 ENSOARG00020016187 ENSOARG00020016214 ENSOARG00020016238 ENSOARG00020016267 TRIM7 (ENSOARG00020016298) TRIM41 (ENSOARG00020016370) RACK1 (ENSOARG00020016489) TRIM52 (ENSOARG00020016996) ENSOARG00020017076 ENSOARG00020017138 ENSOARG00020017168 Caprinae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.a.j ##22 Goat MODERN SPECIES 26 ENSCHIG00000008342 OR6F1 (ENSCHIG00000012565) OR13G1 (ENSCHIG00000004024) ENSCHIG00000012281 ENSCHIG00000018860 OR2G3 (ENSCHIG00000010997) ENSCHIG00000003268 GCSAML (ENSCHIG00000013826) ENSCHIG00000026010 ENSCHIG00000020778 ENSCHIG00000008976 OR2B11 (ENSCHIG00000011822) NLRP3 (ENSCHIG00000023246) ZNF496 (ENSCHIG00000016046) ENSCHIG00000001018 ENSCHIG00000006767 ##22 ENSCHIG00000013605 ##22 ENSCHIG00000016951 TRIM52 (ENSCHIG00000022440) ENSCHIG00000015585 TRIM41 (ENSCHIG00000001532) TRIM7 (ENSCHIG00000025933) ENSCHIG00000006546 ENSCHIG00000006352 ENSCHIG00000007855 ENSCHIG00000009493 BTNL9 (ENSCHIG00000022970) ZFP62 (ENSCHIG00000010843) MGAT1 (ENSCHIG00000009572) OR2Y1 (ENSCHIG00000010557) ENSCHIG00000009729 Bovinae ANCESTRAL SPECIES 2 ENSGT01050000244828.c.b.a ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.f ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Bos ANCESTRAL SPECIES 3 ENSGT01050000244828.c.b.a ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.f ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Bos_a ANCESTRAL SPECIES 2 ENSGT01050000244828.c.b.b.b.c.b ENSGT01050000244828.c.b.a ENSGT01090000260086.E.b ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01060000248581.C.a.a.h ENSGT01100000263486.a.b.a.a.a.a.a.b.b.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.f ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Domestic yak MODERN SPECIES 27 ENSBGRG00000015466 ENSBGRG00000015441 ENSBGRG00000015418 ENSBGRG00000015399 OR6F1 (ENSBGRG00000015314) ENSBGRG00000015193 ENSBGRG00000015128 OR2G2 (ENSBGRG00000015104) GCSAML (ENSBGRG00000014849) OR2C3 (ENSBGRG00000014763) ENSBGRG00000014703 OR2B11 (ENSBGRG00000014686) ENSBGRG00000014576 NLRP3 (ENSBGRG00000014502) ZNF496 (ENSBGRG00000014412) ENSBGRG00000014185 ##22 ENSBGRG00000014048 ENSBGRG00000013560 ENSBGRG00000013468 TRIM7 (ENSBGRG00000013210) ENSBGRG00000013153 ENSBGRG00000013134 ENSBGRG00000013118 ENSBGRG00000013094 ENSBGRG00000012983 ENSBGRG00000012926 ENSBGRG00000012896 ENSBGRG00000012885 BTNL9 (ENSBGRG00000012806) ZFP62 (ENSBGRG00000012776) MGAT1 (ENSBGRG00000012759) Wild yak MODERN SPECIES 377 ENSBMUG00000018664 ENSBMUG00000018648 OR2G2 (ENSBMUG00000018637) ENSBMUG00000018628 GCSAML (ENSBMUG00000018597) ENSBMUG00000018573 ENSBMUG00000018564 OR2B11 (ENSBMUG00000018554) ENSBMUG00000018538 NLRP3 (ENSBMUG00000018522) ZNF496 (ENSBMUG00000018502) ENSBMUG00000018477 ENSBMUG00000018468 ENSBMUG00000018449 ##22 ENSBMUG00000018410 TRIM52 (ENSBMUG00000018405) RACK1 (ENSBMUG00000018291) TRIM41 (ENSBMUG00000018238) TRIM7 (ENSBMUG00000018218) ENSBMUG00000018200 ENSBMUG00000018191 Bos_b ANCESTRAL SPECIES 2 ENSGT01050000244828.c.b.a ENSGT01090000260086.E.b ENSGT00940000162666 ENSGT01060000248581.C.a.a.g ENSGT01060000248581.C.a.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.b.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.f ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b.f ENSGT01090000260018.D.d.b.e ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000259995.b.a.a.b.e ENSGT01090000259995.b.a.a.b.f ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Hybrid Bos Indicus MODERN SPECIES 26 OR6F1 (ENSBIXG00005026921) OR13G1 (ENSBIXG00005004596) ENSBIXG00005026899 ENSBIXG00005026891 OR2G3 (ENSBIXG00005026871) ENSBIXG00005026865 OR2G2 (ENSBIXG00005026861) ENSBIXG00005026848 GCSAML (ENSBIXG00005026826) ENSBIXG00005026786 ENSBIXG00005026781 ENSBIXG00005026771 OR2B11 (ENSBIXG00005026765) NLRP3 (ENSBIXG00005004574) ZNF496 (ENSBIXG00005004553) ENSBIXG00005026630 ##22 ENSBIXG00005026624 ENSBIXG00005026618 ENSBIXG00005007643 TRIM41 (ENSBIXG00005026488) TRIM7 (ENSBIXG00005004519) ENSBIXG00005006614 ENSBIXG00005026404 ENSBIXG00005026400 ENSBIXG00005026394 ENSBIXG00005026378 ENSBIXG00005026361 ENSBIXG00005026338 ENSBIXG00005004494 BTNL9 (ENSBIXG00005026305) ZFP62 (ENSBIXG00005004477) Cow MODERN SPECIES 26 OR9E2 (ENSBTAG00000039804) OR2G3 (ENSBTAG00000027911) ENSBTAG00000030735 OR2G28 (ENSBTAG00000039930) OR2G27 (ENSBTAG00000039484) GCSAML (ENSBTAG00000052663) OR2C3B (ENSBTAG00000048069) OR2C3 (ENSBTAG00000048315) OR2W53 (ENSBTAG00000048813) OR2B11 (ENSBTAG00000039422) OR2H10 (ENSBTAG00000039986) ENSBTAG00000051477 NLRP3 (ENSBTAG00000001273) ZNF496 (ENSBTAG00000049098) ENSBTAG00000050157 IFI47 (ENSBTAG00000015727) ##22 ENSBTAG00000004815 TRIM52 (ENSBTAG00000019651) RACK1 (ENSBTAG00000019648) TRIM41 (ENSBTAG00000019646) TRIM7 (ENSBTAG00000020954) OR2V2D (ENSBTAG00000050954) OR2V2 (ENSBTAG00000049174) OR2V1 (ENSBTAG00000049103) OR2T61 (ENSBTAG00000039706) OR2T26 (ENSBTAG00000024713) OR2O2 (ENSBTAG00000046424) BTNL9 (ENSBTAG00000047420) ZFP62 (ENSBTAG00000039711) MGAT1 (ENSBTAG00000001546) OR2Y1 (ENSBTAG00000038629) American bison MODERN SPECIES 3155 ENSBBBG00000011470 ENSBBBG00000011466 ENSBBBG00000011460 ENSBBBG00000011451 OR13G1 (ENSBBBG00000002100) ENSBBBG00000011441 OR2G3 (ENSBBBG00000011436) OR2G2 (ENSBBBG00000002092) ENSBBBG00000011429 GCSAML (ENSBBBG00000002088) OR2C3 (ENSBBBG00000002015) ENSBBBG00000002081 ENSBBBG00000011385 NLRP3 (ENSBBBG00000011376) ZNF496 (ENSBBBG00000011364) ENSBBBG00000011359 ##22 ENSBBBG00000011349 TRIM52 (ENSBBBG00000008280) RACK1 (ENSBBBG00000011325) TRIM41 (ENSBBBG00000011261) TRIM7 (ENSBBBG00000008025) ENSBBBG00000011230 ENSBBBG00000002044 ENSBBBG00000011223 ENSBBBG00000007118 ENSBBBG00000008197 ENSBBBG00000002033 ENSBBBG00000002028 ENSBBBG00000011165 BTNL9 (ENSBBBG00000011162) ZFP62 (ENSBBBG00000011149) Siberian musk deer MODERN SPECIES 136 ENSMMSG00000014643 ##22 TRIM52 (ENSMMSG00000014650) RACK1 (ENSMMSG00000014673) TRIM41 (ENSMMSG00000014601) TRIM7 (ENSMMSG00000014633) ENSMMSG00000014661 ENSMMSG00000014668 ENSMMSG00000014679 ENSMMSG00000014698 BTNL9 (ENSMMSG00000014722) ZFP62 (ENSMMSG00000014748) MGAT1 (ENSMMSG00000014763) OR2Y1 (ENSMMSG00000014771) ENSMMSG00000014778 ENSMMSG00000014822 PROP1 (ENSMMSG00000014828) Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000162517 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00390000017153.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000162678 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00910000147883 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00390000011365.a ENSGT00940000162517 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000162678 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b Glires ANCESTRAL SPECIES 7 ENSGT00390000011365.a ENSGT00940000162517 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000162678 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b Rodentia ANCESTRAL SPECIES 7 ENSGT01090000259995.b.a.a.a.a.a.a ENSGT01090000260018.A.a.a.b.b ENSGT01090000260018.A.a.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000259995.a.a.a ENSGT00390000010671 ENSGT00730000111648 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 ENSGT00940000163610 ENSGT00940000162327 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.a Rodentia_A ANCESTRAL SPECIES 7 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT00940000154294.k.b ENSGT00940000154294.l ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00940000162308 ENSGT00390000016270 ENSGT00390000009391.b ENSGT00940000158124 ENSGT00940000158245 ENSGT00390000017923 ENSGT00940000154451 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00940000158603 ENSGT00940000153203.A.a ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 ENSGT00940000161487 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000162570 ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b Naked mole-rat female MODERN SPECIES 23 FNIP1 (ENSHGLG00000005873) ENSHGLG00000045572 ENSHGLG00000008395 RAPGEF6 (ENSHGLG00000009326) CDC42SE2 (ENSHGLG00000046813) HINT1 (ENSHGLG00000035928) ENSHGLG00000010810 GPX3 (ENSHGLG00000050015) TNIP1 (ENSHGLG00000016203) ANXA6 (ENSHGLG00000019363) CCDC69 (ENSHGLG00000043600) ENSHGLG00000047632 SLC36A3 (ENSHGLG00000034529) ENSHGLG00000015897 ENSHGLG00000034913 ##22 ENSHGLG00000037097 ##22 ENSHGLG00000048856 ##22 ENSHGLG00000036718 ENSHGLG00000017987 ##22 ENSHGLG00000017675 RMND5B (ENSHGLG00000032587) NHP2 (ENSHGLG00000043955) HNRNPAB (ENSHGLG00000014490) PHYKPL (ENSHGLG00000018644) COL23A1 (ENSHGLG00000039641) ENSHGLG00000013793 ZNF354A (ENSHGLG00000005975) ENSHGLG00000039978 ENSHGLG00000045105 ENSHGLG00000032445 ENSHGLG00000009648 Hystricomorpha_a ANCESTRAL SPECIES 28 ENSGT00940000162308 ENSGT00390000016270 ENSGT00390000009391.b ENSGT00940000158124 ENSGT00940000158245 ENSGT00390000017923 ENSGT00940000154451 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00390000013425 ENSGT00940000162308 ENSGT00390000016270 ENSGT00390000009391.b ENSGT00940000158124 ENSGT00940000158245 ENSGT00390000017923 ENSGT00940000154451 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00940000158603 ENSGT00940000153203.A.a ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 ENSGT00940000161487 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000162570 ENSGT00940000162743 ENSGT00940000162181 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 115 CSF2 (ENSCLAG00000014543) ACSL6 (ENSCLAG00000015484) MEIKIN (ENSCLAG00000013946) FNIP1 (ENSCLAG00000015635) RAPGEF6 (ENSCLAG00000014812) CDC42SE2 (ENSCLAG00000010493) LYRM7 (ENSCLAG00000012806) HINT1 (ENSCLAG00000012693) GPX3 (ENSCLAG00000012373) TNIP1 (ENSCLAG00000012681) ANXA6 (ENSCLAG00000011840) ENSCLAG00000010402 GM2A (ENSCLAG00000010551) SLC36A3 (ENSCLAG00000013137) SLC36A2 (ENSCLAG00000012068) ENSCLAG00000017791 ##22 ENSCLAG00000010886 ##22 ENSCLAG00000017811 ##22 ENSCLAG00000011265 ##22 N4BP3 (ENSCLAG00000013512) RMND5B (ENSCLAG00000012053) NHP2 (ENSCLAG00000016005) HNRNPAB (ENSCLAG00000011022) PHYKPL (ENSCLAG00000014481) COL23A1 (ENSCLAG00000011420) CLK4 (ENSCLAG00000013604) ZNF354A (ENSCLAG00000014648) ENSCLAG00000010643 ENSCLAG00000017710 ZNF354B (ENSCLAG00000013514) ZFP2 (ENSCLAG00000011174) Long-tailed chinchilla MODERN SPECIES 115 AFF4 (ENSCLAG00000013850) ZCCHC10 (ENSCLAG00000012644) HSPA4 (ENSCLAG00000013757) FSTL4 (ENSCLAG00000013940) C5orf15 (ENSCLAG00000015163) ENSCLAG00000011602 TCF7 (ENSCLAG00000015886) ENSCLAG00000012399 PPP2CA (ENSCLAG00000015668) CDKL3 (ENSCLAG00000013562) UBE2B (ENSCLAG00000015390) CDKN2AIPNL (ENSCLAG00000015651) JADE2 (ENSCLAG00000014619) ENSCLAG00000015791 SEC24A (ENSCLAG00000013518) ENSCLAG00000017958 ##22 SLC36A1 (ENSCLAG00000013787) FAT2 (ENSCLAG00000015326) SPARC (ENSCLAG00000012628) ATOX1 (ENSCLAG00000011704) G3BP1 (ENSCLAG00000012636) GLRA1 (ENSCLAG00000015181) GRIA1 (ENSCLAG00000017069) FAM114A2 (ENSCLAG00000013645) MFAP3 (ENSCLAG00000014677) GALNT10 (ENSCLAG00000013273) SAP30L (ENSCLAG00000011128) HAND1 (ENSCLAG00000011515) LARP1 (ENSCLAG00000012755) FAXDC2 (ENSCLAG00000011632) CNOT8 (ENSCLAG00000012116) Guinea pig DUPLICATION Guinea pig DUPLICATION Guinea pig DUPLICATION Guinea pig MODERN SPECIES 81 RAPGEF6 (ENSCPOG00000010242) CDC42SE2 (ENSCPOG00000039035) ENSCPOG00000000849 LYRM7 (ENSCPOG00000039454) HINT1 (ENSCPOG00000023046) GPX3 (ENSCPOG00000006611) TNIP1 (ENSCPOG00000006613) ANXA6 (ENSCPOG00000005272) CCDC69 (ENSCPOG00000031762) GM2A (ENSCPOG00000040130) SLC36A3 (ENSCPOG00000009677) SLC36A2 (ENSCPOG00000008306) ENSCPOG00000034918 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000025531 ##22 Guinea pig MODERN SPECIES 81 CSF2 (ENSCPOG00000014074) ACSL6 (ENSCPOG00000012748) FNIP1 (ENSCPOG00000030775) RAPGEF6 (ENSCPOG00000010242) CDC42SE2 (ENSCPOG00000039035) ENSCPOG00000000849 LYRM7 (ENSCPOG00000039454) HINT1 (ENSCPOG00000023046) GPX3 (ENSCPOG00000006611) TNIP1 (ENSCPOG00000006613) ANXA6 (ENSCPOG00000005272) CCDC69 (ENSCPOG00000031762) GM2A (ENSCPOG00000040130) SLC36A3 (ENSCPOG00000009677) SLC36A2 (ENSCPOG00000008306) ENSCPOG00000034918 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000025531 ##22 Guinea pig MODERN SPECIES 81 ENSCPOG00000025531 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000034918 ##22 SLC36A2 (ENSCPOG00000008306) SLC36A3 (ENSCPOG00000009677) GM2A (ENSCPOG00000040130) CCDC69 (ENSCPOG00000031762) ANXA6 (ENSCPOG00000005272) TNIP1 (ENSCPOG00000006613) GPX3 (ENSCPOG00000006611) HINT1 (ENSCPOG00000023046) LYRM7 (ENSCPOG00000039454) ENSCPOG00000000849 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 81 ELP4 (ENSCPOG00000007237) IMMP1L (ENSCPOG00000020043) DNAJC24 (ENSCPOG00000005159) MPPED2 (ENSCPOG00000034992) ARL14EP (ENSCPOG00000007727) FSHB (ENSCPOG00000007723) KCNA4 (ENSCPOG00000039821) ENSCPOG00000009931 GLRA1 (ENSCPOG00000013725) G3BP1 (ENSCPOG00000006626) ATOX1 (ENSCPOG00000034767) SPARC (ENSCPOG00000025242) FAT2 (ENSCPOG00000014431) SLC36A1 (ENSCPOG00000014430) ENSCPOG00000034856 ##22 ENSCPOG00000023450 ##22 SEC24A (ENSCPOG00000014716) SAR1B (ENSCPOG00000038655) JADE2 (ENSCPOG00000008323) CDKN2AIPNL (ENSCPOG00000015544) UBE2B (ENSCPOG00000030926) ENSCPOG00000007474 PPP2CA (ENSCPOG00000039543) SKP1 (ENSCPOG00000005164) TCF7 (ENSCPOG00000020029) ENSCPOG00000023840 C5orf15 (ENSCPOG00000010300) FSTL4 (ENSCPOG00000007594) ENSCPOG00000040616 HSPA4 (ENSCPOG00000004085) ZCCHC10 (ENSCPOG00000010824) Guinea pig MODERN SPECIES 81 HSPA4 (ENSCPOG00000004085) ENSCPOG00000040616 FSTL4 (ENSCPOG00000007594) C5orf15 (ENSCPOG00000010300) ENSCPOG00000023840 TCF7 (ENSCPOG00000020029) SKP1 (ENSCPOG00000005164) PPP2CA (ENSCPOG00000039543) ENSCPOG00000007474 UBE2B (ENSCPOG00000030926) CDKN2AIPNL (ENSCPOG00000015544) JADE2 (ENSCPOG00000008323) SAR1B (ENSCPOG00000038655) SEC24A (ENSCPOG00000014716) ENSCPOG00000023450 ##22 ENSCPOG00000034856 ##22 SLC36A1 (ENSCPOG00000014430) FAT2 (ENSCPOG00000014431) SPARC (ENSCPOG00000025242) ATOX1 (ENSCPOG00000034767) G3BP1 (ENSCPOG00000006626) GLRA1 (ENSCPOG00000013725) ENSCPOG00000009931 KCNA4 (ENSCPOG00000039821) FSHB (ENSCPOG00000007723) ARL14EP (ENSCPOG00000007727) MPPED2 (ENSCPOG00000034992) DNAJC24 (ENSCPOG00000005159) IMMP1L (ENSCPOG00000020043) ELP4 (ENSCPOG00000007237) PAX6 (ENSCPOG00000007245) Sciuridae ANCESTRAL SPECIES 33 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a Marmotini ANCESTRAL SPECIES 104 ENSGT00950000183007.a.b.g.b.h ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.a.b ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338.i ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.a.a Marmotini_b ANCESTRAL SPECIES 185 ENSGT00950000183007.a.b.g.b.h ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.a.b ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338.i ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.a.a Squirrel MODERN SPECIES 426 ENSSTOG00000020635 ##22 ENSSTOG00000022405 RACK1 (ENSSTOG00000007063) TRIM41 (ENSSTOG00000007039) TRIM7 (ENSSTOG00000007028) ENSSTOG00000033339 ENSSTOG00000029935 ENSSTOG00000028138 BTNL9 (ENSSTOG00000011424) ZFP62 (ENSSTOG00000010705) MGAT1 (ENSSTOG00000022716) ENSSTOG00000019678 ENSSTOG00000024935 ENSSTOG00000034393 ENSSTOG00000030306 ENSSTOG00000024834 Arctic ground squirrel MODERN SPECIES 788 ENSUPAG00010005582 ##22 ENSUPAG00010005584 ##22 ENSUPAG00010005587 ##22 ENSUPAG00010005600 ENSUPAG00010005606 RACK1 (ENSUPAG00010005608) TRIM41 (ENSUPAG00010005621) TRIM7 (ENSUPAG00010005630) ENSUPAG00010005639 ENSUPAG00010005649 Alpin marmot MODERN SPECIES 142 ENSMMMG00000020890 ##22 ENSMMMG00000020898 ##22 ENSMMMG00000020918 ##22 ENSMMMG00000020961 RACK1 (ENSMMMG00000020964) TRIM41 (ENSMMMG00000020984) TRIM7 (ENSMMMG00000020988) ENSMMMG00000020991 ENSMMMG00000021003 ENSMMMG00000021006 ENSMMMG00000021009 ENSMMMG00000021017 BTNL9 (ENSMMMG00000021019) MGAT1 (ENSMMMG00000021031) ENSMMMG00000021035 ENSMMMG00000021040 ENSMMMG00000021042 ENSMMMG00000021046 Rodentia_B ANCESTRAL SPECIES 77 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Myomorpha ANCESTRAL SPECIES 82 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 Muroidea ANCESTRAL SPECIES 10 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345 ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT00940000163029 ENSGT00940000159358 ENSGT00420000029848.A ENSGT00940000158978 ENSGT00940000156413 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l ENSGT00520000062120 ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Cricetidae ANCESTRAL SPECIES ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l ENSGT00520000062120 ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Cricetinae ANCESTRAL SPECIES ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l ENSGT00520000062120 ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b Chinese hamster chok1gshd MODERN SPECIES 229 Med7 (ENSCGRG00001003660) Havcr2 (ENSCGRG00001019621) ENSCGRG00001019450 Havcr1 (ENSCGRG00001022176) Timd4 (ENSCGRG00001009908) Sgcd (ENSCGRG00001013442) ENSCGRG00001023359 ENSCGRG00001011288 Rack1 (ENSCGRG00001015886) Trim41 (ENSCGRG00001016698) Trim7 (ENSCGRG00001021678) Irgm1 (ENSCGRG00001012432) ##22 ENSCGRG00001022428 ##22 ENSCGRG00001006408 ##22 ENSCGRG00001005773 ##22 Ifi47 (ENSCGRG00001001682) ##22 Or2v2 (ENSCGRG00001005579) Or2v1 (ENSCGRG00001006442) Or2t26 (ENSCGRG00001007197) Or2o1 (ENSCGRG00001008440) Btnl9 (ENSCGRG00001004215) Mgat1 (ENSCGRG00001009916) ENSCGRG00001007853 Or2y1e (ENSCGRG00001007503) Or2y17 (ENSCGRG00001009532) Or2y1d (ENSCGRG00001007708) Or2y16 (ENSCGRG00001011387) ENSCGRG00001006876 ENSCGRG00001005846 ENSCGRG00001004527 ENSCGRG00001006709 Golden Hamster MODERN SPECIES 647 Sox30 (ENSMAUG00000016375) ENSMAUG00000001628 Nipal4 (ENSMAUG00000007354) Fndc9 (ENSMAUG00000002327) Cyfip2 (ENSMAUG00000011538) Itk (ENSMAUG00000018699) Garin3 (ENSMAUG00000007741) Med7 (ENSMAUG00000014731) Havcr2 (ENSMAUG00000000929) ENSMAUG00000007758 Dppa1 (ENSMAUG00000014594) Timd4 (ENSMAUG00000003000) ENSMAUG00000011659 ENSMAUG00000008048 ENSMAUG00000001081 Ifi47 (ENSMAUG00000006870) ##22 Or2v1 (ENSMAUG00000017002) Or2t26 (ENSMAUG00000016888) Btnl9 (ENSMAUG00000000678) ENSMAUG00000016879 Or2y1e (ENSMAUG00000016843) Or2y1d (ENSMAUG00000017011) Or2y16 (ENSMAUG00000016979) ENSMAUG00000016974 ENSMAUG00000018285 Flt4 (ENSMAUG00000014271) Scgb3a1 (ENSMAUG00000012240) Cnot6 (ENSMAUG00000019798) Gfpt2 (ENSMAUG00000000755) Mapk9 (ENSMAUG00000017175) Rasgef1c (ENSMAUG00000017005) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l ENSGT00940000161609 ENSGT00940000158509 ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Northern American deer mouse MODERN SPECIES 21 ENSPEMG00000028909 ENSPEMG00000025066 ENSPEMG00000024940 ENSPEMG00000030816 Timd4 (ENSPEMG00000012210) Sgcd (ENSPEMG00000011649) ENSPEMG00000027931 Rack1 (ENSPEMG00000011124) Trim41 (ENSPEMG00000017879) Trim7 (ENSPEMG00000012640) Irgm1 (ENSPEMG00000018645) ##22 ENSPEMG00000028500 ##22 ENSPEMG00000015679 ##22 ENSPEMG00000018053 ##22 ENSPEMG00000029540 Ifi47 (ENSPEMG00000017464) ##22 Or2v2 (ENSPEMG00000025836) Or2v1 (ENSPEMG00000025959) Or2t26 (ENSPEMG00000007090) Or2o1 (ENSPEMG00000008066) Btnl9 (ENSPEMG00000015855) Zfp62 (ENSPEMG00000012272) Mgat1 (ENSPEMG00000005968) ENSPEMG00000028956 ENSPEMG00000031159 ENSPEMG00000029606 Or2y1e (ENSPEMG00000024557) Or2y17 (ENSPEMG00000030604) Or2y1d (ENSPEMG00000030040) Or2y16 (ENSPEMG00000027297) ENSPEMG00000027022 Murinae ANCESTRAL SPECIES 7 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l.c ENSGT00940000159345.l.d ENSGT00520000062120 ENSGT00940000159345.k.b ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b Mus ANCESTRAL SPECIES 2 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.l.c ENSGT00940000159345.l.d ENSGT00520000062120 ENSGT00940000159345.k.b ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b Mus_A ANCESTRAL SPECIES 2 ENSGT00940000154444.A ENSGT00940000159345.l.c ENSGT00940000159345.l.d ENSGT00520000062120 ENSGT00940000159345.k.b ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b Mus_B ANCESTRAL SPECIES 2 ENSGT00940000159345.l.c ENSGT00940000159345.l.d ENSGT00520000062120 ENSGT00940000159345.k.b ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b Mus_C ANCESTRAL SPECIES 3 ENSGT00940000159345.l.c ENSGT00940000159345.l.d ENSGT00520000062120 ENSGT00940000159345.k.b ENSGT00940000159345.k.a ENSGT00940000161609 ENSGT00940000158509 ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT00950000183007.a.b.g.b.c ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b ENSGT00940000159358 ENSGT00420000029848.A spretus MODERN SPECIES 2 Dppa1 (MGP_SPRETEiJ_G0017089) Timd2 (MGP_SPRETEiJ_G0017090) Havcr1 (MGP_SPRETEiJ_G0017091) MGP_SPRETEiJ_G0017092 Sgcd (MGP_SPRETEiJ_G0017093) Rack1 (MGP_SPRETEiJ_G0017094) Trim41 (MGP_SPRETEiJ_G0017095) Trim7 (MGP_SPRETEiJ_G0017096) Irgm1 (MGP_SPRETEiJ_G0017097) ##22 MGP_SPRETEiJ_G0017098 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017101 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017103 ##22 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017106 Or2v2 (MGP_SPRETEiJ_G0017107) Or2t26 (MGP_SPRETEiJ_G0017108) Or2o1 (MGP_SPRETEiJ_G0017109) Btnl9 (MGP_SPRETEiJ_G0017110) Zfp62 (MGP_SPRETEiJ_G0017111) Mgat1 (MGP_SPRETEiJ_G0017112) Or2y1e (MGP_SPRETEiJ_G0017113) Or2y1d (MGP_SPRETEiJ_G0017114) MGP_SPRETEiJ_G0017115 Or2y15 (MGP_SPRETEiJ_G0017116) MGP_SPRETEiJ_G0017117 MGP_SPRETEiJ_G0017118 MGP_SPRETEiJ_G0017119 Flt4 (MGP_SPRETEiJ_G0017120) Steppe mouse MODERN SPECIES 264 ENSMSIG00000020788 Ifi47 (ENSMSIG00000020778) ##22 Or2v2 (ENSMSIG00000020774) Or2v1 (ENSMSIG00000020765) Or2t26 (ENSMSIG00000020757) Or2o1 (ENSMSIG00000020748) Btnl9 (ENSMSIG00000020639) Zfp62 (ENSMSIG00000020616) Mgat1 (ENSMSIG00000020604) Mouse MODERN SPECIES 2 Timd4 (ENSMUSG00000055546) Sgcd (ENSMUSG00000020354) Rack1 (ENSMUSG00000020372) Trim41 (ENSMUSG00000040365) Gm12184 (ENSMUSG00000078154) Trim7 (ENSMUSG00000040350) Irgm1 (ENSMUSG00000046879) ##22 Gm5431 (ENSMUSG00000058163) ##22 Gm12185 (ENSMUSG00000048852) ##22 Psme2b (ENSMUSG00000078153) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Or2v1 (ENSMUSG00000040328) Tgtp1 (ENSMUSG00000078922) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp2 (ENSMUSG00000078921) ##22 Ifi47 (ENSMUSG00000078920) ##22 Or2v2 (ENSMUSG00000047511) Or2t26 (ENSMUSG00000050763) Or2o1 (ENSMUSG00000048378) Btnl9 (ENSMUSG00000040283) Zfp62 (ENSMUSG00000046311) Mgat1 (ENSMUSG00000020346) Or2y1g (ENSMUSG00000059864) Or2y1f (ENSMUSG00000101750) Or2y1b (ENSMUSG00000100923) Or2y1e (ENSMUSG00000101874) Or2y17 (ENSMUSG00000045421) Or2y1d (ENSMUSG00000107573) Or2y16 (ENSMUSG00000047702) Or2y15 (ENSMUSG00000063386) Or2y1c (ENSMUSG00000108167) Ryukyu mouse MODERN SPECIES 2 Havcr2 (MGP_CAROLIEiJ_G0016245) Gm12169 (MGP_CAROLIEiJ_G0016246) BC053393 (MGP_CAROLIEiJ_G0016247) Dppa1 (MGP_CAROLIEiJ_G0016248) MGP_CAROLIEiJ_G0016249 Havcr1 (MGP_CAROLIEiJ_G0016250) Timd4 (MGP_CAROLIEiJ_G0016251) Sgcd (MGP_CAROLIEiJ_G0016252) Rack1 (MGP_CAROLIEiJ_G0016253) Trim41 (MGP_CAROLIEiJ_G0016254) Trim7 (MGP_CAROLIEiJ_G0016255) Irgm1 (MGP_CAROLIEiJ_G0016256) ##22 MGP_CAROLIEiJ_G0016257 ##22 MGP_CAROLIEiJ_G0016258 ##22 MGP_CAROLIEiJ_G0016260 ##22 Ifi47 (MGP_CAROLIEiJ_G0016261) ##22 Or2v1 (MGP_CAROLIEiJ_G0016262) Or2t26 (MGP_CAROLIEiJ_G0016263) Or2o1 (MGP_CAROLIEiJ_G0016264) Btnl9 (MGP_CAROLIEiJ_G0016265) Zfp62 (MGP_CAROLIEiJ_G0016266) Mgat1 (MGP_CAROLIEiJ_G0016267) Or2y1e (MGP_CAROLIEiJ_G0016268) Or2y1d (MGP_CAROLIEiJ_G0016269) Or2y16 (MGP_CAROLIEiJ_G0016270) Or2y15 (MGP_CAROLIEiJ_G0016271) MGP_CAROLIEiJ_G0016272 MGP_CAROLIEiJ_G0016273 MGP_CAROLIEiJ_G0016274 Flt4 (MGP_CAROLIEiJ_G0016275) Scgb3a1 (MGP_CAROLIEiJ_G0016276) Shrew mouse MODERN SPECIES 5 Garin3 (MGP_PahariEiJ_G0017379) Med7 (MGP_PahariEiJ_G0017380) Havcr2 (MGP_PahariEiJ_G0017381) Gm12169 (MGP_PahariEiJ_G0017382) BC053393 (MGP_PahariEiJ_G0017383) MGP_PahariEiJ_G0017384 MGP_PahariEiJ_G0017385 Havcr1 (MGP_PahariEiJ_G0017386) Timd4 (MGP_PahariEiJ_G0017387) Sgcd (MGP_PahariEiJ_G0017388) Rack1 (MGP_PahariEiJ_G0017389) Trim41 (MGP_PahariEiJ_G0017390) Trim7 (MGP_PahariEiJ_G0017391) Irgm1 (MGP_PahariEiJ_G0017392) ##22 Or2v1 (MGP_PahariEiJ_G0017393) Ifi47 (MGP_PahariEiJ_G0017394) ##22 MGP_PahariEiJ_G0017395 MGP_PahariEiJ_G0017396 Or2t26 (MGP_PahariEiJ_G0017397) Or2o1 (MGP_PahariEiJ_G0017398) MGP_PahariEiJ_G0017399 Zfp62 (MGP_PahariEiJ_G0017400) Mgat1 (MGP_PahariEiJ_G0017401) MGP_PahariEiJ_G0017402 Or2y1e (MGP_PahariEiJ_G0017403) MGP_PahariEiJ_G0017404 ##22 MGP_PahariEiJ_G0017405 ##22 Or2y1d (MGP_PahariEiJ_G0017406) Or2y16 (MGP_PahariEiJ_G0017407) Or2y15 (MGP_PahariEiJ_G0017408) MGP_PahariEiJ_G0017409 Rat MODERN SPECIES 1 LOC689968 (ENSRNOG00000042265) Dppa1 (ENSRNOG00000043293) Timd2 (ENSRNOG00000021345) ENSRNOG00000067141 Havcr1 (ENSRNOG00000007243) Timd4 (ENSRNOG00000038894) Sgcd (ENSRNOG00000002372) ENSRNOG00000067540 ENSRNOG00000063521 Rpl30-ps1 (ENSRNOG00000051163) Rack1 (ENSRNOG00000052620) Trim41 (ENSRNOG00000002388) Trim7 (ENSRNOG00000002469) Irgm (ENSRNOG00000031138) ##22 RGD1559575 (ENSRNOG00000032396) ##22 Ifi47 (ENSRNOG00000002470) ##22 Or2v2c (ENSRNOG00000069777) Fam98b-ps1 (ENSRNOG00000069394) Or2v2 (ENSRNOG00000069499) AC103024.1 (ENSRNOG00000031313) Or2v2b (ENSRNOG00000064665) Or2v1 (ENSRNOG00000064581) Or2t26 (ENSRNOG00000048210) LOC684471 (ENSRNOG00000068423) Btnl9 (ENSRNOG00000046377) Zfp62 (ENSRNOG00000051756) Mgat1 (ENSRNOG00000068826) Or2y1g (ENSRNOG00000065390) Or2y1h (ENSRNOG00000070227) Or2y1e (ENSRNOG00000064091) ENSRNOG00000066319 Upper Galilee mountains blind mole rat MODERN SPECIES 1306 Timd4 (ENSNGAG00000023712) Sgcd (ENSNGAG00000022742) Rack1 (ENSNGAG00000003406) Trim41 (ENSNGAG00000023272) Trim7 (ENSNGAG00000023925) Irgm1 (ENSNGAG00000013043) ##22 ENSNGAG00000021829 ##22 ENSNGAG00000021197 ##22 Ifi47 (ENSNGAG00000023999) ##22 ENSNGAG00000024187 ENSNGAG00000022536 Or2v1 (ENSNGAG00000013833) Or2t26 (ENSNGAG00000014682) Btnl9 (ENSNGAG00000023753) Mgat1 (ENSNGAG00000021645) ENSNGAG00000013552 Or2y1e (ENSNGAG00000013882) Or2y1d (ENSNGAG00000013420) ENSNGAG00000013991 Theria ANCESTRAL SPECIES 232 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 235 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a ##22 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000157138 ENSGT00940000162069 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000017153.b ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 Glires ANCESTRAL SPECIES 7 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 Rodentia ANCESTRAL SPECIES 7 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01050000244857.C.a.b ENSGT00530000063851.b ENSGT00940000161018 ENSGT00390000006753.B ENSGT00940000159700 ENSGT00950000183158.E ENSGT00940000155742 ENSGT00520000057704 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00390000014940 ENSGT00940000159206 ENSGT00940000157199 ENSGT00390000006935 Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01050000244857.C.a.b ENSGT00530000063851.b ENSGT00940000161018 ENSGT00390000006753.B ENSGT00940000159700 ENSGT00950000183158.E ENSGT00940000155742 ENSGT00520000057704 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00390000014940 ENSGT00940000159206 ENSGT00940000157199 ENSGT00390000006935 Muroidea ANCESTRAL SPECIES 4 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01050000244857.C.a.b ENSGT00530000063851.b ENSGT00940000161018 ENSGT00390000006753.B ENSGT00940000159700 ENSGT00950000183158.E ENSGT00940000155742 ENSGT00520000057704 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00390000014940 ENSGT00940000159206 ENSGT00940000157199 ENSGT00390000006935 Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Cricetidae DUPLICATION Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.a ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.a ##22 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 10 Csf1r (ENSPEMG00000010942) Pdgfrb (ENSPEMG00000016131) Cdx1 (ENSPEMG00000029534) Slc6a7 (ENSPEMG00000015046) Camk2a (ENSPEMG00000016613) Arsi (ENSPEMG00000017637) Cd74 (ENSPEMG00000015385) ENSPEMG00000000346 Ndst1 (ENSPEMG00000009619) Synpo (ENSPEMG00000013062) Myoz3 (ENSPEMG00000005852) Rbm22 (ENSPEMG00000001753) Dctn4 (ENSPEMG00000016396) ENSPEMG00000024947 Smim3 (ENSPEMG00000025362) ENSPEMG00000024725 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000028339 ##22 Chsy3 (ENSPEMG00000010192) Minar2 (ENSPEMG00000024423) Adamts19 (ENSPEMG00000015969) Isoc1 (ENSPEMG00000000429) Slc27a6 (ENSPEMG00000011111) Fbn2 (ENSPEMG00000007637) Slc12a2 (ENSPEMG00000014358) Ccdc192 (ENSPEMG00000017831) Ctxn3 (ENSPEMG00000030766) Northern American deer mouse MODERN SPECIES 10 ENSPEMG00000026741 Ctxn3 (ENSPEMG00000030766) Ccdc192 (ENSPEMG00000017831) Slc12a2 (ENSPEMG00000014358) Fbn2 (ENSPEMG00000007637) Slc27a6 (ENSPEMG00000011111) Isoc1 (ENSPEMG00000000429) Adamts19 (ENSPEMG00000015969) Minar2 (ENSPEMG00000024423) Chsy3 (ENSPEMG00000010192) ENSPEMG00000028339 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024725 ##22 Smim3 (ENSPEMG00000025362) ENSPEMG00000024947 Dctn4 (ENSPEMG00000016396) Rbm22 (ENSPEMG00000001753) Myoz3 (ENSPEMG00000005852) Synpo (ENSPEMG00000013062) Ndst1 (ENSPEMG00000009619) ENSPEMG00000000346 Cd74 (ENSPEMG00000015385) Arsi (ENSPEMG00000017637) Camk2a (ENSPEMG00000016613) Slc6a7 (ENSPEMG00000015046) Cdx1 (ENSPEMG00000029534) Pdgfrb (ENSPEMG00000016131) Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT01050000244857.C.a.b ENSGT00530000063851.b ENSGT00940000161018 ENSGT00390000006753.B ENSGT00940000159700 ENSGT00950000183158.E ENSGT00940000155742 ENSGT00520000057704 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00390000014940 ENSGT00940000159206 Chinese hamster chok1gshd MODERN SPECIES 153 Cdx1 (ENSCGRG00001016843) Slc6a7 (ENSCGRG00001006717) ENSCGRG00001022640 Arsi (ENSCGRG00001004125) Tcof1 (ENSCGRG00001009700) Cd74 (ENSCGRG00001022698) RPS14 (ENSCGRG00001019064) ENSCGRG00001007906 Ndst1 (ENSCGRG00001024486) Synpo (ENSCGRG00001015166) Myoz3 (ENSCGRG00001012865) Rbm22 (ENSCGRG00001015110) Dctn4 (ENSCGRG00001000529) ENSCGRG00001016490 Smim3 (ENSCGRG00001001317) ENSCGRG00001002378 ##22 ENSCGRG00001003754 ##22 ENSCGRG00001022150 ##22 ENSCGRG00001007108 ##22 Chsy3 (ENSCGRG00001009384) ENSCGRG00001011405 Minar2 (ENSCGRG00001019772) Adamts19 (ENSCGRG00001006886) Isoc1 (ENSCGRG00001012959) Slc27a6 (ENSCGRG00001021010) Fbn2 (ENSCGRG00001020407) ENSCGRG00001024319 Slc12a2 (ENSCGRG00001019992) Ccdc192 (ENSCGRG00001017920) Ctxn3 (ENSCGRG00001003792) Prrc1 (ENSCGRG00001021725) Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Northern American deer mouse MODERN SPECIES 10 Megf10 (ENSPEMG00000014062) Prrc1 (ENSPEMG00000009474) ENSPEMG00000026741 Ctxn3 (ENSPEMG00000030766) Ccdc192 (ENSPEMG00000017831) Slc12a2 (ENSPEMG00000014358) Fbn2 (ENSPEMG00000007637) Slc27a6 (ENSPEMG00000011111) Isoc1 (ENSPEMG00000000429) Adamts19 (ENSPEMG00000015969) Minar2 (ENSPEMG00000024423) Chsy3 (ENSPEMG00000010192) ENSPEMG00000028339 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024725 ##22 Smim3 (ENSPEMG00000025362) ENSPEMG00000024947 Dctn4 (ENSPEMG00000016396) Rbm22 (ENSPEMG00000001753) Myoz3 (ENSPEMG00000005852) Synpo (ENSPEMG00000013062) Ndst1 (ENSPEMG00000009619) ENSPEMG00000000346 Cd74 (ENSPEMG00000015385) Arsi (ENSPEMG00000017637) Camk2a (ENSPEMG00000016613) Slc6a7 (ENSPEMG00000015046) Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Chinese hamster chok1gshd MODERN SPECIES 153 Megf10 (ENSCGRG00001016594) Prrc1 (ENSCGRG00001021725) Ctxn3 (ENSCGRG00001003792) Ccdc192 (ENSCGRG00001017920) Slc12a2 (ENSCGRG00001019992) ENSCGRG00001024319 Fbn2 (ENSCGRG00001020407) Slc27a6 (ENSCGRG00001021010) Isoc1 (ENSCGRG00001012959) Adamts19 (ENSCGRG00001006886) Minar2 (ENSCGRG00001019772) ENSCGRG00001011405 Chsy3 (ENSCGRG00001009384) ENSCGRG00001007108 ##22 ENSCGRG00001022150 ##22 ENSCGRG00001003754 ##22 ENSCGRG00001002378 ##22 Smim3 (ENSCGRG00001001317) ENSCGRG00001016490 Dctn4 (ENSCGRG00001000529) Rbm22 (ENSCGRG00001015110) Myoz3 (ENSCGRG00001012865) Synpo (ENSCGRG00001015166) Ndst1 (ENSCGRG00001024486) ENSCGRG00001007906 RPS14 (ENSCGRG00001019064) Cd74 (ENSCGRG00001022698) Tcof1 (ENSCGRG00001009700) Arsi (ENSCGRG00001004125) ENSCGRG00001022640 Slc6a7 (ENSCGRG00001006717) Cricetidae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.a.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.a.b ##22 Northern American deer mouse MODERN SPECIES 10 Cd74 (ENSPEMG00000015385) ENSPEMG00000000346 Ndst1 (ENSPEMG00000009619) Synpo (ENSPEMG00000013062) Myoz3 (ENSPEMG00000005852) Rbm22 (ENSPEMG00000001753) Dctn4 (ENSPEMG00000016396) ENSPEMG00000024947 Smim3 (ENSPEMG00000025362) ENSPEMG00000024725 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000028339 ##22 Chsy3 (ENSPEMG00000010192) Minar2 (ENSPEMG00000024423) Adamts19 (ENSPEMG00000015969) Isoc1 (ENSPEMG00000000429) Slc27a6 (ENSPEMG00000011111) Fbn2 (ENSPEMG00000007637) Slc12a2 (ENSPEMG00000014358) Ccdc192 (ENSPEMG00000017831) Ctxn3 (ENSPEMG00000030766) ENSPEMG00000026741 Prrc1 (ENSPEMG00000009474) Megf10 (ENSPEMG00000014062) C330018D20Rik (ENSPEMG00000024261) ENSPEMG00000030304 Marchf3 (ENSPEMG00000001664) Murinae ANCESTRAL SPECIES 17 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Mus ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 Mus_A ANCESTRAL SPECIES 19 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Mus_B ANCESTRAL SPECIES 19 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Mus_C ANCESTRAL SPECIES 16 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Steppe mouse MODERN SPECIES 3298 Marchf3 (ENSMSIG00000012363) C330018D20Rik (ENSMSIG00000012311) ENSMSIG00000012287 Megf10 (ENSMSIG00000012159) Prrc1 (ENSMSIG00000012115) Ctxn3 (ENSMSIG00000012104) ENSMSIG00000012012 Slc12a2 (ENSMSIG00000011923) Fbn2 (ENSMSIG00000011840) Slc27a6 (ENSMSIG00000011812) ENSMSIG00000011795 Adamts19 (ENSMSIG00000011735) Minar2 (ENSMSIG00000011693) Chsy3 (ENSMSIG00000011682) Gm4951 (ENSMSIG00000011672) ##22 F830016B08Rik (ENSMSIG00000011657) ##22 Mouse MODERN SPECIES 9 Marchf3 (ENSMUSG00000032656) C330018D20Rik (ENSMUSG00000024592) Megf10 (ENSMUSG00000024593) Prrc1 (ENSMUSG00000024594) Ctxn3 (ENSMUSG00000069372) Ccdc192 (ENSMUSG00000058925) Slc12a2 (ENSMUSG00000024597) Fbn2 (ENSMUSG00000024598) Slc27a6 (ENSMUSG00000024600) Isoc1 (ENSMUSG00000024601) Adamts19 (ENSMUSG00000053441) Minar2 (ENSMUSG00000050875) Chsy3 (ENSMUSG00000058152) Gm4951 (ENSMUSG00000073555) ##22 Gm4841 (ENSMUSG00000068606) ##22 F830016B08Rik (ENSMUSG00000090942) ##22 Iigp1 (ENSMUSG00000054072) ##22 Smim3 (ENSMUSG00000038059) Dctn4 (ENSMUSG00000024603) Rbm22 (ENSMUSG00000024604) Myoz3 (ENSMUSG00000049173) Synpo (ENSMUSG00000043079) Ndst1 (ENSMUSG00000054008) Rps14 (ENSMUSG00000024608) Cd74 (ENSMUSG00000024610) Tcof1 (ENSMUSG00000024613) Arsi (ENSMUSG00000036412) Camk2a (ENSMUSG00000024617) Slc6a7 (ENSMUSG00000052026) Cdx1 (ENSMUSG00000024619) Pdgfrb (ENSMUSG00000024620) Rat MODERN SPECIES 9 LOC100174910 (ENSRNOG00000013738) Megf10 (ENSRNOG00000013674) Prrc1 (ENSRNOG00000016433) AC105604.1 (ENSRNOG00000033015) Ctxn3 (ENSRNOG00000022957) ENSRNOG00000065037 Slc12a2 (ENSRNOG00000015971) Fbn2 (ENSRNOG00000043219) Slc27a6 (ENSRNOG00000058193) Isoc1 (ENSRNOG00000019711) ENSRNOG00000066477 Adamts19 (ENSRNOG00000019577) Minar2 (ENSRNOG00000022429) Chsy3 (ENSRNOG00000050152) LOC100910979 (ENSRNOG00000019542) ##22 RGD1305184 (ENSRNOG00000038957) ##22 MGC105567 (ENSRNOG00000038955) ##22 Smim3 (ENSRNOG00000019536) Dctn4 (ENSRNOG00000019298) Rbm22 (ENSRNOG00000019235) Synpo (ENSRNOG00000019181) Ndst1 (ENSRNOG00000019014) Rps14 (ENSRNOG00000018774) Cd74 (ENSRNOG00000018735) Tcof1 (ENSRNOG00000026108) Arsi (ENSRNOG00000026060) Camk2a (ENSRNOG00000018712) Slc6a7 (ENSRNOG00000018644) Cdx1 (ENSRNOG00000060334) Pdgfrb (ENSRNOG00000018461) Csf1r (ENSRNOG00000018414) Muroidea_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Murinae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Mus ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Mus_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Mus_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Mus_C ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 575 ENSMSIG00000007043 ##22 Steppe mouse MODERN SPECIES 3429 ENSMSIG00000031517 ##22 Mouse MODERN SPECIES 9 Cdx1 (ENSMUSG00000024619) Slc6a7 (ENSMUSG00000052026) Camk2a (ENSMUSG00000024617) Arsi (ENSMUSG00000036412) Tcof1 (ENSMUSG00000024613) Cd74 (ENSMUSG00000024610) Rps14 (ENSMUSG00000024608) Ndst1 (ENSMUSG00000054008) Synpo (ENSMUSG00000043079) Myoz3 (ENSMUSG00000049173) Rbm22 (ENSMUSG00000024604) Dctn4 (ENSMUSG00000024603) Smim3 (ENSMUSG00000038059) Iigp1 (ENSMUSG00000054072) ##22 F830016B08Rik (ENSMUSG00000090942) ##22 Gm4841 (ENSMUSG00000068606) ##22 Gm4951 (ENSMUSG00000073555) ##22 Chsy3 (ENSMUSG00000058152) Minar2 (ENSMUSG00000050875) Adamts19 (ENSMUSG00000053441) Isoc1 (ENSMUSG00000024601) Slc27a6 (ENSMUSG00000024600) Fbn2 (ENSMUSG00000024598) Slc12a2 (ENSMUSG00000024597) Ccdc192 (ENSMUSG00000058925) Ctxn3 (ENSMUSG00000069372) Prrc1 (ENSMUSG00000024594) Megf10 (ENSMUSG00000024593) C330018D20Rik (ENSMUSG00000024592) Marchf3 (ENSMUSG00000032656) Lmnb1 (ENSMUSG00000024590) Cricetidae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.a.a.b ##22 Prairie vole MODERN SPECIES 5 Marchf3 (ENSMOCG00000015860) C330018D20Rik (ENSMOCG00000017421) ENSMOCG00000004556 Megf10 (ENSMOCG00000006860) Prrc1 (ENSMOCG00000022749) Ctxn3 (ENSMOCG00000016702) Ccdc192 (ENSMOCG00000001024) Slc12a2 (ENSMOCG00000006368) Fbn2 (ENSMOCG00000019336) Slc27a6 (ENSMOCG00000013137) Isoc1 (ENSMOCG00000012485) Adamts19 (ENSMOCG00000009346) Minar2 (ENSMOCG00000010236) Chsy3 (ENSMOCG00000002116) ENSMOCG00000017914 ##22 ENSMOCG00000002764 ##22 ENSMOCG00000014355 ##22 Smim3 (ENSMOCG00000010280) Dctn4 (ENSMOCG00000015060) Rbm22 (ENSMOCG00000018311) Myoz3 (ENSMOCG00000022001) Synpo (ENSMOCG00000020812) Ndst1 (ENSMOCG00000023013) ENSMOCG00000005011 Cd74 (ENSMOCG00000008628) Tcof1 (ENSMOCG00000007081) Arsi (ENSMOCG00000011780) Camk2a (ENSMOCG00000006768) Slc6a7 (ENSMOCG00000021402) Cdx1 (ENSMOCG00000005003) Pdgfrb (ENSMOCG00000015349) Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Northern American deer mouse MODERN SPECIES 10 Prrc1 (ENSPEMG00000009474) ENSPEMG00000026741 Ctxn3 (ENSPEMG00000030766) Ccdc192 (ENSPEMG00000017831) Slc12a2 (ENSPEMG00000014358) Fbn2 (ENSPEMG00000007637) Slc27a6 (ENSPEMG00000011111) Isoc1 (ENSPEMG00000000429) Adamts19 (ENSPEMG00000015969) Minar2 (ENSPEMG00000024423) Chsy3 (ENSPEMG00000010192) ENSPEMG00000028339 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024725 ##22 Smim3 (ENSPEMG00000025362) ENSPEMG00000024947 Dctn4 (ENSPEMG00000016396) Rbm22 (ENSPEMG00000001753) Myoz3 (ENSPEMG00000005852) Synpo (ENSPEMG00000013062) Ndst1 (ENSPEMG00000009619) ENSPEMG00000000346 Cd74 (ENSPEMG00000015385) Arsi (ENSPEMG00000017637) Camk2a (ENSPEMG00000016613) Slc6a7 (ENSPEMG00000015046) Cdx1 (ENSPEMG00000029534) Prairie vole MODERN SPECIES 5 C330018D20Rik (ENSMOCG00000017421) ENSMOCG00000004556 Megf10 (ENSMOCG00000006860) Prrc1 (ENSMOCG00000022749) Ctxn3 (ENSMOCG00000016702) Ccdc192 (ENSMOCG00000001024) Slc12a2 (ENSMOCG00000006368) Fbn2 (ENSMOCG00000019336) Slc27a6 (ENSMOCG00000013137) Isoc1 (ENSMOCG00000012485) Adamts19 (ENSMOCG00000009346) Minar2 (ENSMOCG00000010236) Chsy3 (ENSMOCG00000002116) ENSMOCG00000017914 ##22 ENSMOCG00000002764 ##22 ENSMOCG00000014355 ##22 Smim3 (ENSMOCG00000010280) Dctn4 (ENSMOCG00000015060) Rbm22 (ENSMOCG00000018311) Myoz3 (ENSMOCG00000022001) Synpo (ENSMOCG00000020812) Ndst1 (ENSMOCG00000023013) ENSMOCG00000005011 Cd74 (ENSMOCG00000008628) Tcof1 (ENSMOCG00000007081) Arsi (ENSMOCG00000011780) Camk2a (ENSMOCG00000006768) Slc6a7 (ENSMOCG00000021402) Cdx1 (ENSMOCG00000005003) Pdgfrb (ENSMOCG00000015349) Csf1r (ENSMOCG00000018935) Murinae ANCESTRAL SPECIES 17 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Rat MODERN SPECIES 9 Megf10 (ENSRNOG00000013674) Prrc1 (ENSRNOG00000016433) AC105604.1 (ENSRNOG00000033015) Ctxn3 (ENSRNOG00000022957) ENSRNOG00000065037 Slc12a2 (ENSRNOG00000015971) Fbn2 (ENSRNOG00000043219) Slc27a6 (ENSRNOG00000058193) Isoc1 (ENSRNOG00000019711) ENSRNOG00000066477 Adamts19 (ENSRNOG00000019577) Minar2 (ENSRNOG00000022429) Chsy3 (ENSRNOG00000050152) LOC100910979 (ENSRNOG00000019542) ##22 RGD1305184 (ENSRNOG00000038957) ##22 MGC105567 (ENSRNOG00000038955) ##22 Smim3 (ENSRNOG00000019536) Dctn4 (ENSRNOG00000019298) Rbm22 (ENSRNOG00000019235) Synpo (ENSRNOG00000019181) Ndst1 (ENSRNOG00000019014) Rps14 (ENSRNOG00000018774) Cd74 (ENSRNOG00000018735) Tcof1 (ENSRNOG00000026108) Arsi (ENSRNOG00000026060) Camk2a (ENSRNOG00000018712) Slc6a7 (ENSRNOG00000018644) Cdx1 (ENSRNOG00000060334) Pdgfrb (ENSRNOG00000018461) Csf1r (ENSRNOG00000018414) Hmgxb3 (ENSRNOG00000018132) Muroidea_A ANCESTRAL SPECIES 18 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Cricetidae ANCESTRAL SPECIES 18 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Cricetinae ANCESTRAL SPECIES 14 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 153 Marchf3 (ENSCGRG00001018443) C330018D20Rik (ENSCGRG00001000564) Megf10 (ENSCGRG00001016594) Prrc1 (ENSCGRG00001021725) Ctxn3 (ENSCGRG00001003792) Ccdc192 (ENSCGRG00001017920) Slc12a2 (ENSCGRG00001019992) ENSCGRG00001024319 Fbn2 (ENSCGRG00001020407) Slc27a6 (ENSCGRG00001021010) Isoc1 (ENSCGRG00001012959) Adamts19 (ENSCGRG00001006886) Minar2 (ENSCGRG00001019772) ENSCGRG00001011405 Chsy3 (ENSCGRG00001009384) ENSCGRG00001007108 ##22 ENSCGRG00001022150 ##22 ENSCGRG00001003754 ##22 ENSCGRG00001002378 ##22 Smim3 (ENSCGRG00001001317) ENSCGRG00001016490 Dctn4 (ENSCGRG00001000529) Rbm22 (ENSCGRG00001015110) Myoz3 (ENSCGRG00001012865) Synpo (ENSCGRG00001015166) Ndst1 (ENSCGRG00001024486) ENSCGRG00001007906 RPS14 (ENSCGRG00001019064) Cd74 (ENSCGRG00001022698) Tcof1 (ENSCGRG00001009700) Arsi (ENSCGRG00001004125) Chinese hamster chok1gshd MODERN SPECIES 153 C330018D20Rik (ENSCGRG00001000564) Megf10 (ENSCGRG00001016594) Prrc1 (ENSCGRG00001021725) Ctxn3 (ENSCGRG00001003792) Ccdc192 (ENSCGRG00001017920) Slc12a2 (ENSCGRG00001019992) ENSCGRG00001024319 Fbn2 (ENSCGRG00001020407) Slc27a6 (ENSCGRG00001021010) Isoc1 (ENSCGRG00001012959) Adamts19 (ENSCGRG00001006886) Minar2 (ENSCGRG00001019772) ENSCGRG00001011405 Chsy3 (ENSCGRG00001009384) ENSCGRG00001007108 ##22 ENSCGRG00001022150 ##22 ENSCGRG00001003754 ##22 ENSCGRG00001002378 ##22 Smim3 (ENSCGRG00001001317) ENSCGRG00001016490 Dctn4 (ENSCGRG00001000529) Rbm22 (ENSCGRG00001015110) Myoz3 (ENSCGRG00001012865) Synpo (ENSCGRG00001015166) Ndst1 (ENSCGRG00001024486) ENSCGRG00001007906 RPS14 (ENSCGRG00001019064) Cd74 (ENSCGRG00001022698) Tcof1 (ENSCGRG00001009700) Arsi (ENSCGRG00001004125) ENSCGRG00001022640 Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Northern American deer mouse DUPLICATION Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 421 ENSPEMG00000026844 ##22 Northern American deer mouse MODERN SPECIES 10 C330018D20Rik (ENSPEMG00000024261) Megf10 (ENSPEMG00000014062) Prrc1 (ENSPEMG00000009474) ENSPEMG00000026741 Ctxn3 (ENSPEMG00000030766) Ccdc192 (ENSPEMG00000017831) Slc12a2 (ENSPEMG00000014358) Fbn2 (ENSPEMG00000007637) Slc27a6 (ENSPEMG00000011111) Isoc1 (ENSPEMG00000000429) Adamts19 (ENSPEMG00000015969) Minar2 (ENSPEMG00000024423) Chsy3 (ENSPEMG00000010192) ENSPEMG00000028339 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024725 ##22 Smim3 (ENSPEMG00000025362) ENSPEMG00000024947 Dctn4 (ENSPEMG00000016396) Rbm22 (ENSPEMG00000001753) Myoz3 (ENSPEMG00000005852) Synpo (ENSPEMG00000013062) Ndst1 (ENSPEMG00000009619) ENSPEMG00000000346 Cd74 (ENSPEMG00000015385) Arsi (ENSPEMG00000017637) Camk2a (ENSPEMG00000016613) Northern American deer mouse MODERN SPECIES 10 Arsi (ENSPEMG00000017637) Cd74 (ENSPEMG00000015385) ENSPEMG00000000346 Ndst1 (ENSPEMG00000009619) Synpo (ENSPEMG00000013062) Myoz3 (ENSPEMG00000005852) Rbm22 (ENSPEMG00000001753) Dctn4 (ENSPEMG00000016396) ENSPEMG00000024947 Smim3 (ENSPEMG00000025362) ENSPEMG00000024725 ##22 ENSPEMG00000028385 ##22 ENSPEMG00000024393 ##22 ENSPEMG00000025250 ##22 ENSPEMG00000011957 ##22 ENSPEMG00000024670 ##22 ENSPEMG00000028339 ##22 Chsy3 (ENSPEMG00000010192) Minar2 (ENSPEMG00000024423) Adamts19 (ENSPEMG00000015969) Isoc1 (ENSPEMG00000000429) Slc27a6 (ENSPEMG00000011111) Fbn2 (ENSPEMG00000007637) Slc12a2 (ENSPEMG00000014358) Ccdc192 (ENSPEMG00000017831) Ctxn3 (ENSPEMG00000030766) ENSPEMG00000026741 Prrc1 (ENSPEMG00000009474) Megf10 (ENSPEMG00000014062) C330018D20Rik (ENSPEMG00000024261) ENSPEMG00000030304 Prairie vole MODERN SPECIES 5 Lmnb1 (ENSMOCG00000017413) Marchf3 (ENSMOCG00000015860) C330018D20Rik (ENSMOCG00000017421) ENSMOCG00000004556 Megf10 (ENSMOCG00000006860) Prrc1 (ENSMOCG00000022749) Ctxn3 (ENSMOCG00000016702) Ccdc192 (ENSMOCG00000001024) Slc12a2 (ENSMOCG00000006368) Fbn2 (ENSMOCG00000019336) Slc27a6 (ENSMOCG00000013137) Isoc1 (ENSMOCG00000012485) Adamts19 (ENSMOCG00000009346) Minar2 (ENSMOCG00000010236) Chsy3 (ENSMOCG00000002116) ENSMOCG00000017914 ##22 ENSMOCG00000002764 ##22 ENSMOCG00000014355 ##22 Smim3 (ENSMOCG00000010280) Dctn4 (ENSMOCG00000015060) Rbm22 (ENSMOCG00000018311) Myoz3 (ENSMOCG00000022001) Synpo (ENSMOCG00000020812) Ndst1 (ENSMOCG00000023013) ENSMOCG00000005011 Cd74 (ENSMOCG00000008628) Tcof1 (ENSMOCG00000007081) Arsi (ENSMOCG00000011780) Camk2a (ENSMOCG00000006768) Slc6a7 (ENSMOCG00000021402) Cdx1 (ENSMOCG00000005003) Murinae ANCESTRAL SPECIES 17 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Mus ANCESTRAL SPECIES 19 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Mus_A DUPLICATION Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.b.e.a ##22 Mus_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.b.e.a ##22 Mus_C ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.b.e.a ##22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 1663 ENSMSIG00000014360 ##22 Steppe mouse MODERN SPECIES 472 ENSMSIG00000003432 ##22 Mus_A ANCESTRAL SPECIES 19 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Mus_B ANCESTRAL SPECIES 19 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Mus_C ANCESTRAL SPECIES 16 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 Steppe mouse MODERN SPECIES 3298 Lmnb1 (ENSMSIG00000012389) Marchf3 (ENSMSIG00000012363) C330018D20Rik (ENSMSIG00000012311) ENSMSIG00000012287 Megf10 (ENSMSIG00000012159) Prrc1 (ENSMSIG00000012115) Ctxn3 (ENSMSIG00000012104) ENSMSIG00000012012 Slc12a2 (ENSMSIG00000011923) Fbn2 (ENSMSIG00000011840) Slc27a6 (ENSMSIG00000011812) ENSMSIG00000011795 Adamts19 (ENSMSIG00000011735) Minar2 (ENSMSIG00000011693) Chsy3 (ENSMSIG00000011682) Gm4951 (ENSMSIG00000011672) ##22 F830016B08Rik (ENSMSIG00000011657) ##22 Mouse MODERN SPECIES 9 Tex43 (ENSMUSG00000032900) Lmnb1 (ENSMUSG00000024590) Marchf3 (ENSMUSG00000032656) C330018D20Rik (ENSMUSG00000024592) Megf10 (ENSMUSG00000024593) Prrc1 (ENSMUSG00000024594) Ctxn3 (ENSMUSG00000069372) Ccdc192 (ENSMUSG00000058925) Slc12a2 (ENSMUSG00000024597) Fbn2 (ENSMUSG00000024598) Slc27a6 (ENSMUSG00000024600) Isoc1 (ENSMUSG00000024601) Adamts19 (ENSMUSG00000053441) Minar2 (ENSMUSG00000050875) Chsy3 (ENSMUSG00000058152) Gm4951 (ENSMUSG00000073555) ##22 Gm4841 (ENSMUSG00000068606) ##22 F830016B08Rik (ENSMUSG00000090942) ##22 Iigp1 (ENSMUSG00000054072) ##22 Smim3 (ENSMUSG00000038059) Dctn4 (ENSMUSG00000024603) Rbm22 (ENSMUSG00000024604) Myoz3 (ENSMUSG00000049173) Synpo (ENSMUSG00000043079) Ndst1 (ENSMUSG00000054008) Rps14 (ENSMUSG00000024608) Cd74 (ENSMUSG00000024610) Tcof1 (ENSMUSG00000024613) Arsi (ENSMUSG00000036412) Camk2a (ENSMUSG00000024617) Slc6a7 (ENSMUSG00000052026) Ryukyu mouse MODERN SPECIES 9 Tex43 (MGP_CAROLIEiJ_G0022287) Lmnb1 (MGP_CAROLIEiJ_G0022288) Marchf3 (MGP_CAROLIEiJ_G0022289) C330018D20Rik (MGP_CAROLIEiJ_G0022290) Megf10 (MGP_CAROLIEiJ_G0022291) Prrc1 (MGP_CAROLIEiJ_G0022292) Ctxn3 (MGP_CAROLIEiJ_G0022293) MGP_CAROLIEiJ_G0022294 Slc12a2 (MGP_CAROLIEiJ_G0022295) Fbn2 (MGP_CAROLIEiJ_G0022296) Slc27a6 (MGP_CAROLIEiJ_G0022297) Isoc1 (MGP_CAROLIEiJ_G0022298) Adamts19 (MGP_CAROLIEiJ_G0022299) Minar2 (MGP_CAROLIEiJ_G0022300) Chsy3 (MGP_CAROLIEiJ_G0022301) Gm4951 (MGP_CAROLIEiJ_G0022302) ##22 Iigp1 (MGP_CAROLIEiJ_G0022303) ##22 MGP_CAROLIEiJ_G0022304 ##22 Smim3 (MGP_CAROLIEiJ_G0022305) Dctn4 (MGP_CAROLIEiJ_G0022306) Rbm22 (MGP_CAROLIEiJ_G0022307) Myoz3 (MGP_CAROLIEiJ_G0022308) Synpo (MGP_CAROLIEiJ_G0022309) Ndst1 (MGP_CAROLIEiJ_G0022310) Rps14 (MGP_CAROLIEiJ_G0022311) Cd74 (MGP_CAROLIEiJ_G0022312) Tcof1 (MGP_CAROLIEiJ_G0022313) Arsi (MGP_CAROLIEiJ_G0022314) Camk2a (MGP_CAROLIEiJ_G0022315) Slc6a7 (MGP_CAROLIEiJ_G0022316) Cdx1 (MGP_CAROLIEiJ_G0022317) Mus_A ANCESTRAL SPECIES 19 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Mus_B ANCESTRAL SPECIES 19 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Mus_C ANCESTRAL SPECIES 16 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00950000183007.a.b.g.a.b.a.b.e.b ##22 ENSGT00950000183007.a.b.g.a.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a.b.f ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h.u.a ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 spretus DUPLICATION spretus MODERN SPECIES 9 Lmnb1 (MGP_SPRETEiJ_G0023201) Marchf3 (MGP_SPRETEiJ_G0023202) C330018D20Rik (MGP_SPRETEiJ_G0023203) Megf10 (MGP_SPRETEiJ_G0023204) Prrc1 (MGP_SPRETEiJ_G0023205) Ctxn3 (MGP_SPRETEiJ_G0023206) Ccdc192 (MGP_SPRETEiJ_G0023207) Slc12a2 (MGP_SPRETEiJ_G0023208) Fbn2 (MGP_SPRETEiJ_G0023209) Slc27a6 (MGP_SPRETEiJ_G0023210) Isoc1 (MGP_SPRETEiJ_G0023211) Adamts19 (MGP_SPRETEiJ_G0023212) Minar2 (MGP_SPRETEiJ_G0023213) Chsy3 (MGP_SPRETEiJ_G0023214) MGP_SPRETEiJ_G0023215 ##22 MGP_SPRETEiJ_G0023216 ##22 Smim3 (MGP_SPRETEiJ_G0023217) Dctn4 (MGP_SPRETEiJ_G0023218) Rbm22 (MGP_SPRETEiJ_G0023219) Myoz3 (MGP_SPRETEiJ_G0023220) Synpo (MGP_SPRETEiJ_G0023221) Ndst1 (MGP_SPRETEiJ_G0023222) Rps14 (MGP_SPRETEiJ_G0023223) Cd74 (MGP_SPRETEiJ_G0023224) Tcof1 (MGP_SPRETEiJ_G0023225) Arsi (MGP_SPRETEiJ_G0023226) Camk2a (MGP_SPRETEiJ_G0023227) Slc6a7 (MGP_SPRETEiJ_G0023228) Cdx1 (MGP_SPRETEiJ_G0023229) Pdgfrb (MGP_SPRETEiJ_G0023230) Csf1r (MGP_SPRETEiJ_G0023231) spretus MODERN SPECIES 9 Tex43 (MGP_SPRETEiJ_G0023200) Lmnb1 (MGP_SPRETEiJ_G0023201) Marchf3 (MGP_SPRETEiJ_G0023202) C330018D20Rik (MGP_SPRETEiJ_G0023203) Megf10 (MGP_SPRETEiJ_G0023204) Prrc1 (MGP_SPRETEiJ_G0023205) Ctxn3 (MGP_SPRETEiJ_G0023206) Ccdc192 (MGP_SPRETEiJ_G0023207) Slc12a2 (MGP_SPRETEiJ_G0023208) Fbn2 (MGP_SPRETEiJ_G0023209) Slc27a6 (MGP_SPRETEiJ_G0023210) Isoc1 (MGP_SPRETEiJ_G0023211) Adamts19 (MGP_SPRETEiJ_G0023212) Minar2 (MGP_SPRETEiJ_G0023213) Chsy3 (MGP_SPRETEiJ_G0023214) MGP_SPRETEiJ_G0023215 ##22 MGP_SPRETEiJ_G0023216 ##22 Smim3 (MGP_SPRETEiJ_G0023217) Dctn4 (MGP_SPRETEiJ_G0023218) Rbm22 (MGP_SPRETEiJ_G0023219) Myoz3 (MGP_SPRETEiJ_G0023220) Synpo (MGP_SPRETEiJ_G0023221) Ndst1 (MGP_SPRETEiJ_G0023222) Rps14 (MGP_SPRETEiJ_G0023223) Cd74 (MGP_SPRETEiJ_G0023224) Tcof1 (MGP_SPRETEiJ_G0023225) Arsi (MGP_SPRETEiJ_G0023226) Camk2a (MGP_SPRETEiJ_G0023227) Slc6a7 (MGP_SPRETEiJ_G0023228) Cdx1 (MGP_SPRETEiJ_G0023229) Pdgfrb (MGP_SPRETEiJ_G0023230) Steppe mouse MODERN SPECIES 1535 Iigp1 (ENSMSIG00000022250) ##22 Mouse MODERN SPECIES 9 C330018D20Rik (ENSMUSG00000024592) Megf10 (ENSMUSG00000024593) Prrc1 (ENSMUSG00000024594) Ctxn3 (ENSMUSG00000069372) Ccdc192 (ENSMUSG00000058925) Slc12a2 (ENSMUSG00000024597) Fbn2 (ENSMUSG00000024598) Slc27a6 (ENSMUSG00000024600) Isoc1 (ENSMUSG00000024601) Adamts19 (ENSMUSG00000053441) Minar2 (ENSMUSG00000050875) Chsy3 (ENSMUSG00000058152) Gm4951 (ENSMUSG00000073555) ##22 Gm4841 (ENSMUSG00000068606) ##22 F830016B08Rik (ENSMUSG00000090942) ##22 Iigp1 (ENSMUSG00000054072) ##22 Smim3 (ENSMUSG00000038059) Dctn4 (ENSMUSG00000024603) Rbm22 (ENSMUSG00000024604) Myoz3 (ENSMUSG00000049173) Synpo (ENSMUSG00000043079) Ndst1 (ENSMUSG00000054008) Rps14 (ENSMUSG00000024608) Cd74 (ENSMUSG00000024610) Tcof1 (ENSMUSG00000024613) Arsi (ENSMUSG00000036412) Camk2a (ENSMUSG00000024617) Slc6a7 (ENSMUSG00000052026) Cdx1 (ENSMUSG00000024619) Pdgfrb (ENSMUSG00000024620) Csf1r (ENSMUSG00000024621) Ryukyu mouse MODERN SPECIES 9 Lmnb1 (MGP_CAROLIEiJ_G0022288) Marchf3 (MGP_CAROLIEiJ_G0022289) C330018D20Rik (MGP_CAROLIEiJ_G0022290) Megf10 (MGP_CAROLIEiJ_G0022291) Prrc1 (MGP_CAROLIEiJ_G0022292) Ctxn3 (MGP_CAROLIEiJ_G0022293) MGP_CAROLIEiJ_G0022294 Slc12a2 (MGP_CAROLIEiJ_G0022295) Fbn2 (MGP_CAROLIEiJ_G0022296) Slc27a6 (MGP_CAROLIEiJ_G0022297) Isoc1 (MGP_CAROLIEiJ_G0022298) Adamts19 (MGP_CAROLIEiJ_G0022299) Minar2 (MGP_CAROLIEiJ_G0022300) Chsy3 (MGP_CAROLIEiJ_G0022301) Gm4951 (MGP_CAROLIEiJ_G0022302) ##22 Iigp1 (MGP_CAROLIEiJ_G0022303) ##22 MGP_CAROLIEiJ_G0022304 ##22 Smim3 (MGP_CAROLIEiJ_G0022305) Dctn4 (MGP_CAROLIEiJ_G0022306) Rbm22 (MGP_CAROLIEiJ_G0022307) Myoz3 (MGP_CAROLIEiJ_G0022308) Synpo (MGP_CAROLIEiJ_G0022309) Ndst1 (MGP_CAROLIEiJ_G0022310) Rps14 (MGP_CAROLIEiJ_G0022311) Cd74 (MGP_CAROLIEiJ_G0022312) Tcof1 (MGP_CAROLIEiJ_G0022313) Arsi (MGP_CAROLIEiJ_G0022314) Camk2a (MGP_CAROLIEiJ_G0022315) Slc6a7 (MGP_CAROLIEiJ_G0022316) Cdx1 (MGP_CAROLIEiJ_G0022317) Pdgfrb (MGP_CAROLIEiJ_G0022318) Rat MODERN SPECIES 9 Marchf3 (ENSRNOG00000023013) LOC100174910 (ENSRNOG00000013738) Megf10 (ENSRNOG00000013674) Prrc1 (ENSRNOG00000016433) AC105604.1 (ENSRNOG00000033015) Ctxn3 (ENSRNOG00000022957) ENSRNOG00000065037 Slc12a2 (ENSRNOG00000015971) Fbn2 (ENSRNOG00000043219) Slc27a6 (ENSRNOG00000058193) Isoc1 (ENSRNOG00000019711) ENSRNOG00000066477 Adamts19 (ENSRNOG00000019577) Minar2 (ENSRNOG00000022429) Chsy3 (ENSRNOG00000050152) LOC100910979 (ENSRNOG00000019542) ##22 RGD1305184 (ENSRNOG00000038957) ##22 MGC105567 (ENSRNOG00000038955) ##22 Smim3 (ENSRNOG00000019536) Dctn4 (ENSRNOG00000019298) Rbm22 (ENSRNOG00000019235) Synpo (ENSRNOG00000019181) Ndst1 (ENSRNOG00000019014) Rps14 (ENSRNOG00000018774) Cd74 (ENSRNOG00000018735) Tcof1 (ENSRNOG00000026108) Arsi (ENSRNOG00000026060) Camk2a (ENSRNOG00000018712) Slc6a7 (ENSRNOG00000018644) Cdx1 (ENSRNOG00000060334) Pdgfrb (ENSRNOG00000018461) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Sciuridae ANCESTRAL SPECIES 18 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 23 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a.c.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.bb.a ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Alpin marmot MODERN SPECIES C5orf63 (ENSMMMG00000020014) ENSMMMG00000020005 MEGF10 (ENSMMMG00000019988) PRRC1 (ENSMMMG00000019979) CTXN3 (ENSMMMG00000019975) ENSMMMG00000019969 CCDC192 (ENSMMMG00000019959) SLC12A2 (ENSMMMG00000019843) FBN2 (ENSMMMG00000019800) SLC27A6 (ENSMMMG00000019780) ISOC1 (ENSMMMG00000019777) ADAMTS19 (ENSMMMG00000019725) MINAR2 (ENSMMMG00000019719) ZNF300 (ENSMMMG00000019706) ENSMMMG00000019702 ##22 ENSMMMG00000019661 ##22 SMIM3 (ENSMMMG00000019655) DCTN4 (ENSMMMG00000019623) RBM22 (ENSMMMG00000019619) MYOZ3 (ENSMMMG00000019613) SYNPO (ENSMMMG00000019608) NDST1 (ENSMMMG00000019595) RPS14 (ENSMMMG00000019581) CD74 (ENSMMMG00000019567) TCOF1 (ENSMMMG00000019543) ARSI (ENSMMMG00000019539) CAMK2A (ENSMMMG00000019478) SLC6A7 (ENSMMMG00000019461) ENSMMMG00000019448 PDGFRB (ENSMMMG00000019362) ENSMMMG00000019359 Marmotini_b ANCESTRAL SPECIES 16 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733.i ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a.c.a ##22 ENSGT00950000183007.a.b.g.a.b.a.c.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.bb.a ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Arctic ground squirrel MODERN SPECIES 631 ENSUPAG00010012812 ##22 ENSUPAG00010012810 ENSUPAG00010012808 ##22 DCTN4 (ENSUPAG00010012761) RBM22 (ENSUPAG00010012746) MYOZ3 (ENSUPAG00010012736) SYNPO (ENSUPAG00010012723) NDST1 (ENSUPAG00010012705) ENSUPAG00010012689 CD74 (ENSUPAG00010012673) TCOF1 (ENSUPAG00010012617) ARSI (ENSUPAG00010012612) CAMK2A (ENSUPAG00010012499) SLC6A7 (ENSUPAG00010012475) CDX1 (ENSUPAG00010012466) PDGFRB (ENSUPAG00010012151) Squirrel MODERN SPECIES 104 MARCHF3 (ENSSTOG00000003582) C5orf63 (ENSSTOG00000023735) MEGF10 (ENSSTOG00000010069) PRRC1 (ENSSTOG00000003266) CTXN3 (ENSSTOG00000001125) CCDC192 (ENSSTOG00000031225) ENSSTOG00000032140 SLC12A2 (ENSSTOG00000003238) FBN2 (ENSSTOG00000000208) SLC27A6 (ENSSTOG00000007927) ISOC1 (ENSSTOG00000023369) ADAMTS19 (ENSSTOG00000027482) MINAR2 (ENSSTOG00000011777) CHSY3 (ENSSTOG00000021825) ZNF300 (ENSSTOG00000030911) ENSSTOG00000030572 ##22 ENSSTOG00000025044 ENSSTOG00000024119 ##22 ENSSTOG00000030802 DCTN4 (ENSSTOG00000013446) ENSSTOG00000027197 MYOZ3 (ENSSTOG00000013433) SYNPO (ENSSTOG00000025895) NDST1 (ENSSTOG00000000336) RPS14 (ENSSTOG00000026574) CD74 (ENSSTOG00000009017) TCOF1 (ENSSTOG00000008957) ARSI (ENSSTOG00000026168) CAMK2A (ENSSTOG00000008932) SLC6A7 (ENSSTOG00000007042) CDX1 (ENSSTOG00000020585) Marmotini ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.c.b ##22 Marmotini_b ANCESTRAL SPECIES 16 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733.i ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a.c.a ##22 ENSGT00950000183007.a.b.g.a.b.a.c.b ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.bb.a ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Arctic ground squirrel MODERN SPECIES 631 ENSUPAG00010012812 ##22 ENSUPAG00010012810 ENSUPAG00010012808 ##22 DCTN4 (ENSUPAG00010012761) RBM22 (ENSUPAG00010012746) MYOZ3 (ENSUPAG00010012736) SYNPO (ENSUPAG00010012723) NDST1 (ENSUPAG00010012705) ENSUPAG00010012689 CD74 (ENSUPAG00010012673) TCOF1 (ENSUPAG00010012617) ARSI (ENSUPAG00010012612) CAMK2A (ENSUPAG00010012499) SLC6A7 (ENSUPAG00010012475) CDX1 (ENSUPAG00010012466) PDGFRB (ENSUPAG00010012151) Squirrel MODERN SPECIES 104 MEGF10 (ENSSTOG00000010069) PRRC1 (ENSSTOG00000003266) CTXN3 (ENSSTOG00000001125) CCDC192 (ENSSTOG00000031225) ENSSTOG00000032140 SLC12A2 (ENSSTOG00000003238) FBN2 (ENSSTOG00000000208) SLC27A6 (ENSSTOG00000007927) ISOC1 (ENSSTOG00000023369) ADAMTS19 (ENSSTOG00000027482) MINAR2 (ENSSTOG00000011777) CHSY3 (ENSSTOG00000021825) ZNF300 (ENSSTOG00000030911) ENSSTOG00000030572 ##22 ENSSTOG00000025044 ENSSTOG00000024119 ##22 ENSSTOG00000030802 DCTN4 (ENSSTOG00000013446) ENSSTOG00000027197 MYOZ3 (ENSSTOG00000013433) SYNPO (ENSSTOG00000025895) NDST1 (ENSSTOG00000000336) RPS14 (ENSSTOG00000026574) CD74 (ENSSTOG00000009017) TCOF1 (ENSSTOG00000008957) ARSI (ENSSTOG00000026168) CAMK2A (ENSSTOG00000008932) SLC6A7 (ENSSTOG00000007042) CDX1 (ENSSTOG00000020585) PDGFRB (ENSSTOG00000025211) CSF1R (ENSSTOG00000026851) Marmotini ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a.d ##22 Alpin marmot MODERN SPECIES PDGFRB (ENSMMMG00000019362) ENSMMMG00000019448 SLC6A7 (ENSMMMG00000019461) CAMK2A (ENSMMMG00000019478) ARSI (ENSMMMG00000019539) TCOF1 (ENSMMMG00000019543) CD74 (ENSMMMG00000019567) RPS14 (ENSMMMG00000019581) NDST1 (ENSMMMG00000019595) SYNPO (ENSMMMG00000019608) MYOZ3 (ENSMMMG00000019613) RBM22 (ENSMMMG00000019619) DCTN4 (ENSMMMG00000019623) SMIM3 (ENSMMMG00000019655) ENSMMMG00000019661 ##22 ENSMMMG00000019702 ##22 ZNF300 (ENSMMMG00000019706) MINAR2 (ENSMMMG00000019719) ADAMTS19 (ENSMMMG00000019725) ISOC1 (ENSMMMG00000019777) SLC27A6 (ENSMMMG00000019780) FBN2 (ENSMMMG00000019800) SLC12A2 (ENSMMMG00000019843) CCDC192 (ENSMMMG00000019959) ENSMMMG00000019969 CTXN3 (ENSMMMG00000019975) PRRC1 (ENSMMMG00000019979) MEGF10 (ENSMMMG00000019988) ENSMMMG00000020005 C5orf63 (ENSMMMG00000020014) MARCHF3 (ENSMMMG00000020035) Eurasian red squirrel MODERN SPECIES 15 MARCHF3 (ENSSVLG00005004764) C5orf63 (ENSSVLG00005004783) MEGF10 (ENSSVLG00005004843) PRRC1 (ENSSVLG00005004991) CTXN3 (ENSSVLG00005005087) CCDC192 (ENSSVLG00005005113) SLC12A2 (ENSSVLG00005005235) FBN2 (ENSSVLG00005005704) SLC27A6 (ENSSVLG00005006274) ISOC1 (ENSSVLG00005006325) ADAMTS19 (ENSSVLG00005006365) MINAR2 (ENSSVLG00005006486) CHSY3 (ENSSVLG00005006507) ENSSVLG00005006527 ENSSVLG00005006542 ENSSVLG00005006558 ##22 ENSSVLG00005006595 DCTN4 (ENSSVLG00005006633) RBM22 (ENSSVLG00005006733) MYOZ3 (ENSSVLG00005006774) SYNPO (ENSSVLG00005006825) NDST1 (ENSSVLG00005006873) ENSSVLG00005006912 CD74 (ENSSVLG00005006927) TCOF1 (ENSSVLG00005006969) ARSI (ENSSVLG00005007002) CAMK2A (ENSSVLG00005007155) SLC6A7 (ENSSVLG00005007630) CDX1 (ENSSVLG00005007785) PDGFRB (ENSSVLG00005007828) CSF1R (ENSSVLG00005007891) Hystricomorpha ANCESTRAL SPECIES 27 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000033624 ENSHGLG00000014868 ENSHGLG00000014826 ENSHGLG00000045516 ENSHGLG00000014767 ADAMTS19 (ENSHGLG00000015411) MINAR2 (ENSHGLG00000015376) ENSHGLG00000011633 ENSHGLG00000044750 ENSHGLG00000004498 ENSHGLG00000039649 ENSHGLG00000045312 ENSHGLG00000040996 ENSHGLG00000016330 ENSHGLG00000007766 ENSHGLG00000007116 ##22 ENSHGLG00000006773 ENSHGLG00000045403 DCTN4 (ENSHGLG00000050283) RBM22 (ENSHGLG00000008488) MYOZ3 (ENSHGLG00000007506) SYNPO (ENSHGLG00000039282) NDST1 (ENSHGLG00000004281) RPS14 (ENSHGLG00000004211) CD74 (ENSHGLG00000003902) TCOF1 (ENSHGLG00000007903) ARSI (ENSHGLG00000007275) CAMK2A (ENSHGLG00000006526) SLC6A7 (ENSHGLG00000005136) CDX1 (ENSHGLG00000004687) PDGFRB (ENSHGLG00000003797) Hystricomorpha_a ANCESTRAL SPECIES 24 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Hystricomorpha_b ANCESTRAL SPECIES 57 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 Long-tailed chinchilla MODERN SPECIES 122 MARCHF3 (ENSCLAG00000013418) C5orf63 (ENSCLAG00000009122) MEGF10 (ENSCLAG00000010596) PRRC1 (ENSCLAG00000016667) CTXN3 (ENSCLAG00000017772) SLC12A2 (ENSCLAG00000013215) FBN2 (ENSCLAG00000011548) SLC27A6 (ENSCLAG00000015221) ISOC1 (ENSCLAG00000009599) ADAMTS19 (ENSCLAG00000012123) MINAR2 (ENSCLAG00000009373) CHSY3 (ENSCLAG00000009726) ENSCLAG00000010108 ZNF300 (ENSCLAG00000010228) ENSCLAG00000010051 ##22 SMIM3 (ENSCLAG00000009653) DCTN4 (ENSCLAG00000010349) ENSCLAG00000010842 MYOZ3 (ENSCLAG00000011296) ENSCLAG00000017020 NDST1 (ENSCLAG00000014298) ENSCLAG00000017348 CD74 (ENSCLAG00000014142) TCOF1 (ENSCLAG00000010605) ARSI (ENSCLAG00000014790) CAMK2A (ENSCLAG00000012010) SLC6A7 (ENSCLAG00000011923) CDX1 (ENSCLAG00000009492) PDGFRB (ENSCLAG00000009688) CSF1R (ENSCLAG00000011617) Guinea pig DUPLICATION Guinea pig MODERN SPECIES 6 MARCHF3 (ENSCPOG00000032636) ENSCPOG00000022550 C5orf63 (ENSCPOG00000039359) MEGF10 (ENSCPOG00000003151) PRRC1 (ENSCPOG00000010724) CTXN3 (ENSCPOG00000031953) CCDC192 (ENSCPOG00000034590) SLC12A2 (ENSCPOG00000014529) FBN2 (ENSCPOG00000000726) SLC27A6 (ENSCPOG00000000262) ISOC1 (ENSCPOG00000000643) ADAMTS19 (ENSCPOG00000004770) MINAR2 (ENSCPOG00000012912) ENSCPOG00000003868 ENSCPOG00000038985 ##22 ENSCPOG00000037314 ##22 SMIM3 (ENSCPOG00000035614) DCTN4 (ENSCPOG00000020869) RBM22 (ENSCPOG00000001946) MYOZ3 (ENSCPOG00000032133) SYNPO (ENSCPOG00000034268) NDST1 (ENSCPOG00000002897) RPS14 (ENSCPOG00000024408) CD74 (ENSCPOG00000034371) TCOF1 (ENSCPOG00000002741) ARSI (ENSCPOG00000021634) CAMK2A (ENSCPOG00000006638) SLC6A7 (ENSCPOG00000027356) ENSCPOG00000020353 PDGFRB (ENSCPOG00000005994) CSF1R (ENSCPOG00000024309) Guinea pig MODERN SPECIES 6 PDGFRB (ENSCPOG00000005994) ENSCPOG00000020353 SLC6A7 (ENSCPOG00000027356) CAMK2A (ENSCPOG00000006638) ARSI (ENSCPOG00000021634) TCOF1 (ENSCPOG00000002741) CD74 (ENSCPOG00000034371) RPS14 (ENSCPOG00000024408) NDST1 (ENSCPOG00000002897) SYNPO (ENSCPOG00000034268) MYOZ3 (ENSCPOG00000032133) RBM22 (ENSCPOG00000001946) DCTN4 (ENSCPOG00000020869) SMIM3 (ENSCPOG00000035614) ENSCPOG00000037314 ##22 ENSCPOG00000038985 ##22 ENSCPOG00000003868 MINAR2 (ENSCPOG00000012912) ADAMTS19 (ENSCPOG00000004770) ISOC1 (ENSCPOG00000000643) SLC27A6 (ENSCPOG00000000262) FBN2 (ENSCPOG00000000726) SLC12A2 (ENSCPOG00000014529) CCDC192 (ENSCPOG00000034590) CTXN3 (ENSCPOG00000031953) PRRC1 (ENSCPOG00000010724) MEGF10 (ENSCPOG00000003151) C5orf63 (ENSCPOG00000039359) ENSCPOG00000022550 MARCHF3 (ENSCPOG00000032636) LMNB1 (ENSCPOG00000013383) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000159047 ENSGT00390000011365.a ENSGT00940000162517 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000162678 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.h ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 ENSGT00940000155506 ENSGT00390000006983 Rabbit MODERN SPECIES 14 NMUR2 (ENSOCUG00000013507) ENSOCUG00000029929 GLRA1 (ENSOCUG00000002648) ENSOCUG00000022143 SPARC (ENSOCUG00000012120) ATOX1 (ENSOCUG00000038763) FAT2 (ENSOCUG00000012103) SLC36A1 (ENSOCUG00000012093) SLC36A2 (ENSOCUG00000015850) SLC36A3 (ENSOCUG00000015841) ENSOCUG00000015837 ANXA6 (ENSOCUG00000005379) ENSOCUG00000037867 ZNF300 (ENSOCUG00000037473) ENSOCUG00000028024 ##22 ENSOCUG00000024432 ##22 DCTN4 (ENSOCUG00000013510) RBM22 (ENSOCUG00000011532) MYOZ3 (ENSOCUG00000013346) SYNPO (ENSOCUG00000009270) NDST1 (ENSOCUG00000011515) ENSOCUG00000011509 CD74 (ENSOCUG00000003863) TCOF1 (ENSOCUG00000003848) ARSI (ENSOCUG00000025005) CAMK2A (ENSOCUG00000017865) SLC6A7 (ENSOCUG00000006404) CDX1 (ENSOCUG00000012479) PDGFRB (ENSOCUG00000001725) CSF1R (ENSOCUG00000021056) HMGXB3 (ENSOCUG00000007500) Primates ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a ##22 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 15 ARHGEF37 (ENSMICG00000002691) ENSMICG00000027812 CSNK1A1 (ENSMICG00000027056) IL17B (ENSMICG00000002611) PCYOX1L (ENSMICG00000028126) GRPEL2 (ENSMICG00000042083) AFAP1L1 (ENSMICG00000002598) ABLIM3 (ENSMICG00000002582) SH3TC2 (ENSMICG00000002571) ADRB2 (ENSMICG00000002569) HTR4 (ENSMICG00000002566) FBXO38 (ENSMICG00000002556) SPINK9 (ENSMICG00000046265) SPINK7 (ENSMICG00000002552) ENSMICG00000030041 ENSMICG00000046828 ##22 ZNF300 (ENSMICG00000037632) GPX3 (ENSMICG00000000660) TNIP1 (ENSMICG00000000664) ANXA6 (ENSMICG00000000675) CCDC69 (ENSMICG00000041463) GM2A (ENSMICG00000031216) SLC36A3 (ENSMICG00000000691) SLC36A2 (ENSMICG00000000696) SLC36A1 (ENSMICG00000000700) FAT2 (ENSMICG00000046358) SPARC (ENSMICG00000045601) ATOX1 (ENSMICG00000009954) ENSMICG00000012235 GLRA1 (ENSMICG00000027464) NMUR2 (ENSMICG00000026644) Mouse lemur MODERN SPECIES 15 CSF1R (ENSMICG00000002770) PDGFRB (ENSMICG00000002797) CDX1 (ENSMICG00000033499) SLC6A7 (ENSMICG00000002824) CAMK2A (ENSMICG00000002837) ARSI (ENSMICG00000002855) TCOF1 (ENSMICG00000002858) CD74 (ENSMICG00000002890) RPS14 (ENSMICG00000027116) NDST1 (ENSMICG00000008828) SYNPO (ENSMICG00000037458) MYOZ3 (ENSMICG00000045206) RBM22 (ENSMICG00000033712) DCTN4 (ENSMICG00000035522) SMIM3 (ENSMICG00000045457) ENSMICG00000045819 ##22 ENSMICG00000035670 Atlantogenata ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.a ##22 Afrotheria ANCESTRAL SPECIES 7 ENSGT00940000157342 ENSGT01100000263484.A.d ENSGT00940000159047 ENSGT00390000011365.a ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00390000017153.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703 ENSGT00390000008961.e ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000159769.a.b ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Afrotheria_a ANCESTRAL SPECIES 7 ENSGT00940000157342 ENSGT01100000263484.A.d ENSGT00940000159047 ENSGT00390000011365.a ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000162044 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00390000017153.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703 ENSGT00390000008961.e ENSGT00730000111382 ENSGT00940000157656.a ENSGT00940000159769.a.b ENSGT00940000155150.b.b ENSGT00940000160823 ENSGT00940000162069 ENSGT00940000157138 Elephant DUPLICATION Elephant MODERN SPECIES 2 CDX1 (ENSLAFG00000025906) SLC6A7 (ENSLAFG00000011811) ENSLAFG00000023243 ARSI (ENSLAFG00000014293) TCOF1 (ENSLAFG00000021485) CD74 (ENSLAFG00000017699) ENSLAFG00000031195 NDST1 (ENSLAFG00000000568) SYNPO (ENSLAFG00000006635) MYOZ3 (ENSLAFG00000001650) RBM22 (ENSLAFG00000006638) ENSLAFG00000026095 DCTN4 (ENSLAFG00000022414) SMIM3 (ENSLAFG00000026711) ENSLAFG00000027033 ##22 ENSLAFG00000031011 ##22 GPX3 (ENSLAFG00000020856) TNIP1 (ENSLAFG00000018389) ANXA6 (ENSLAFG00000018391) ENSLAFG00000029680 ENSLAFG00000010040 ENSLAFG00000032400 GM2A (ENSLAFG00000013672) SLC36A2 (ENSLAFG00000016871) ENSLAFG00000031631 SLC36A1 (ENSLAFG00000008327) FAT2 (ENSLAFG00000008329) SPARC (ENSLAFG00000017920) ENSLAFG00000017926 G3BP1 (ENSLAFG00000009182) GLRA1 (ENSLAFG00000021726) Elephant MODERN SPECIES 2 G3BP1 (ENSLAFG00000009182) ENSLAFG00000017926 SPARC (ENSLAFG00000017920) FAT2 (ENSLAFG00000008329) SLC36A1 (ENSLAFG00000008327) ENSLAFG00000031631 SLC36A2 (ENSLAFG00000016871) GM2A (ENSLAFG00000013672) ENSLAFG00000032400 ENSLAFG00000010040 ENSLAFG00000029680 ANXA6 (ENSLAFG00000018391) TNIP1 (ENSLAFG00000018389) GPX3 (ENSLAFG00000020856) ENSLAFG00000031011 ##22 ENSLAFG00000027033 ##22 SMIM3 (ENSLAFG00000026711) DCTN4 (ENSLAFG00000022414) ENSLAFG00000026095 RBM22 (ENSLAFG00000006638) MYOZ3 (ENSLAFG00000001650) SYNPO (ENSLAFG00000006635) NDST1 (ENSLAFG00000000568) ENSLAFG00000031195 CD74 (ENSLAFG00000017699) TCOF1 (ENSLAFG00000021485) ARSI (ENSLAFG00000014293) ENSLAFG00000023243 SLC6A7 (ENSLAFG00000011811) CDX1 (ENSLAFG00000025906) PDGFRB (ENSLAFG00000016816) Xenarthra ANCESTRAL SPECIES 393 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b Armadillo MODERN SPECIES 2556 ENSDNOG00000036141 ##22 ENSDNOG00000047478 ##22 ENSDNOG00000046683 ##22 ENSDNOG00000045232 ##22 ENSDNOG00000037309 ##22 ENSDNOG00000040435 TRIM52 (ENSDNOG00000042088) RACK1 (ENSDNOG00000000767) TRIM41 (ENSDNOG00000000765) TRIM7 (ENSDNOG00000036990) ENSDNOG00000049195 ENSDNOG00000032410 ENSDNOG00000015279 Eutheria ANCESTRAL SPECIES 32 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b Boreoeutheria ANCESTRAL SPECIES 9 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154294.k.a.a.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria_b ANCESTRAL SPECIES 44 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Carnivora DUPLICATION Carnivora ANCESTRAL SPECIES 33 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.a.a Caniformia ANCESTRAL SPECIES 5 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Caniformia_b ANCESTRAL SPECIES 59 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 51 ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.b.b ENSGT00960000186612.A.j.a.a Ursus ANCESTRAL SPECIES 259 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.a.b.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.a Polar bear MODERN SPECIES 390 ENSUMAG00000025023 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025018 ##22 ENSUMAG00000025017 ENSUMAG00000025016 ENSUMAG00000025015 American black bear MODERN SPECIES 2866 ENSUAMG00000013623 ##22 ENSUAMG00000013638 ##22 ENSUAMG00000013639 ##22 ENSUAMG00000013643 ##22 ENSUAMG00000013669 Giant Panda MODERN SPECIES 13 ENSAMEG00000020052 ENSAMEG00000015006 BTNL9 (ENSAMEG00000015008) ENSAMEG00000029392 TRIM7 (ENSAMEG00000029192) TRIM41 (ENSAMEG00000000005) ENSAMEG00000000004 ENSAMEG00000000003 ENSAMEG00000025627 ENSAMEG00000001281 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000014070 ##22 ENSAMEG00000019860 ENSAMEG00000026408 ENSAMEG00000026034 ENSAMEG00000027968 ENSAMEG00000019809 ENSAMEG00000027505 ENSAMEG00000000974 ENSAMEG00000000972 ENSAMEG00000026585 CNOT6 (ENSAMEG00000000949) GFPT2 (ENSAMEG00000000889) MAPK9 (ENSAMEG00000000853) RASGEF1C (ENSAMEG00000000806) RNF130 (ENSAMEG00000008631) TBC1D9B (ENSAMEG00000008647) Ursidae ANCESTRAL SPECIES 51 ENSGT01030000234553.b.b.d.c.a.c.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b.g ENSGT01090000259995.b.a.a.b.h ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.b.b ENSGT00960000186612.A.j.a.a Ursus ANCESTRAL SPECIES 149 ENSGT00940000162327 ENSGT01030000234553.b.b.d.c.a.c.a ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b.g ENSGT01090000259995.b.a.a.b.h ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 Polar bear MODERN SPECIES 495 ENSUMAG00000009652 ZFP62 (ENSUMAG00000009655) ENSUMAG00000009664 ENSUMAG00000009668 ENSUMAG00000009669 ENSUMAG00000009671 ENSUMAG00000009673 ENSUMAG00000009674 ENSUMAG00000009676 TRIM7 (ENSUMAG00000009682) TRIM41 (ENSUMAG00000009686) RACK1 (ENSUMAG00000009689) TRIM52 (ENSUMAG00000009699) ENSUMAG00000009703 ENSUMAG00000009713 ##22 ENSUMAG00000009716 ##22 ENSUMAG00000009719 ##22 Giant Panda MODERN SPECIES 307 ENSAMEG00000003457 ##22 ENSAMEG00000029214 ##22 ENSAMEG00000024394 ##22 ENSAMEG00000030403 ##22 Canidae ANCESTRAL SPECIES 9 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000162750 ENSGT00530000063632.B Canis_lupus ANCESTRAL SPECIES 15 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00950000182802.A.bb ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01050000245376.a.a ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a Dingo MODERN SPECIES 238 LTC4S (ENSCAFG00020002654) MGAT4B (ENSCAFG00020002640) SQSTM1 (ENSCAFG00020002634) MRNIP (ENSCAFG00020002630) TBC1D9B (ENSCAFG00020002609) RNF130 (ENSCAFG00020002599) RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) GFPT2 (ENSCAFG00020002548) ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) FLT4 (ENSCAFG00020002415) ENSCAFG00020002411 ENSCAFG00020002403 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002301 ##22 ENSCAFG00020002291 ENSCAFG00020002248 ##22 ENSCAFG00020002229 ##22 TRIM52 (ENSCAFG00020002225) RACK1 (ENSCAFG00020002209) TRIM41 (ENSCAFG00020002200) TRIM7 (ENSCAFG00020002191) ENSCAFG00020002186 ENSCAFG00020002183 ENSCAFG00020002179 ENSCAFG00020002171 ENSCAFG00020002169 Dog MODERN SPECIES 2 LTC4S (ENSCAFG00845007863) MGAT4B (ENSCAFG00845007711) SQSTM1 (ENSCAFG00845007599) ENSCAFG00845007488 TBC1D9B (ENSCAFG00845007248) RNF130 (ENSCAFG00845007023) RASGEF1C (ENSCAFG00845006880) MAPK9 (ENSCAFG00845006710) GFPT2 (ENSCAFG00845006488) ENSCAFG00845006420 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006015 ENSCAFG00845005841 ENSCAFG00845005821 ENSCAFG00845005800 ##22 IFGGB2 (ENSCAFG00845005769) ##22 ENSCAFG00845005718 ##22 IFGGC1 (ENSCAFG00845005668) ##22 ENSCAFG00845005621 ENSCAFG00845005606 ENSCAFG00845005580 ##22 ENSCAFG00845005562 ENSCAFG00845005544 RACK1 (ENSCAFG00845005488) TRIM41 (ENSCAFG00845005431) TRIM7 (ENSCAFG00845005395) ENSCAFG00845005382 OR2T26 (ENSCAFG00845005372) BTNL9 (ENSCAFG00845005351) ENSCAFG00845005321 ENSCAFG00845005305 Red fox MODERN SPECIES 281 RASGEF1C (ENSVVUG00000026954) MAPK9 (ENSVVUG00000026948) GFPT2 (ENSVVUG00000026945) ENSVVUG00000026942 CNOT6 (ENSVVUG00000026940) FLT4 (ENSVVUG00000026937) ENSVVUG00000026936 ENSVVUG00000026932 ##22 ENSVVUG00000026931 ##22 ENSVVUG00000026930 ##22 ENSVVUG00000026929 ##22 Felidae ANCESTRAL SPECIES 6 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 Panthera ANCESTRAL SPECIES 6 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 ENSGT00940000160510 Panthera_a ANCESTRAL SPECIES 3 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 ENSGT00950000182843.b ENSGT00940000154494.a ENSGT00940000159618 ENSGT00940000160510 lion MODERN SPECIES MAML1 (ENSPLOG00000001822) LTC4S (ENSPLOG00000001837) MGAT4B (ENSPLOG00000001865) SQSTM1 (ENSPLOG00000001888) ENSPLOG00000001922 ENSPLOG00000001926 TBC1D9B (ENSPLOG00000001968) RNF130 (ENSPLOG00000002028) RASGEF1C (ENSPLOG00000002080) MAPK9 (ENSPLOG00000002198) GFPT2 (ENSPLOG00000002417) CNOT6 (ENSPLOG00000002444) ENSPLOG00000002463 FLT4 (ENSPLOG00000002503) ENSPLOG00000002578 ENSPLOG00000002591 ##22 ENSPLOG00000002605 TRIM52 (ENSPLOG00000002622) RACK1 (ENSPLOG00000002660) TRIM41 (ENSPLOG00000002727) TRIM7 (ENSPLOG00000002799) ENSPLOG00000002848 ENSPLOG00000002893 ENSPLOG00000002906 ZFP62 (ENSPLOG00000002927) MGAT1 (ENSPLOG00000002940) JMJD4 (ENSPLOG00000002956) SNAP47 (ENSPLOG00000002987) ENSPLOG00000003011 PRSS38 (ENSPLOG00000003023) WNT9A (ENSPLOG00000000004) Carnivora ANCESTRAL SPECIES 33 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.a.a Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES 5 ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 Canidae ANCESTRAL SPECIES 9 ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000162750 ENSGT00530000063632.B Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00950000182802.A.bb ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01050000245376.a.a ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00530000063632.B Dingo MODERN SPECIES 238 RNF130 (ENSCAFG00020002599) RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) GFPT2 (ENSCAFG00020002548) ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) FLT4 (ENSCAFG00020002415) ENSCAFG00020002411 ENSCAFG00020002403 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002301 ##22 ENSCAFG00020002291 ENSCAFG00020002248 ##22 ENSCAFG00020002229 ##22 TRIM52 (ENSCAFG00020002225) RACK1 (ENSCAFG00020002209) TRIM41 (ENSCAFG00020002200) TRIM7 (ENSCAFG00020002191) ENSCAFG00020002186 ENSCAFG00020002183 ENSCAFG00020002179 ENSCAFG00020002171 ENSCAFG00020002169 MGAT1 (ENSCAFG00020002161) Dog MODERN SPECIES 2 RNF130 (ENSCAFG00845007023) RASGEF1C (ENSCAFG00845006880) MAPK9 (ENSCAFG00845006710) GFPT2 (ENSCAFG00845006488) ENSCAFG00845006420 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006015 ENSCAFG00845005841 ENSCAFG00845005821 ENSCAFG00845005800 ##22 IFGGB2 (ENSCAFG00845005769) ##22 ENSCAFG00845005718 ##22 IFGGC1 (ENSCAFG00845005668) ##22 ENSCAFG00845005621 ENSCAFG00845005606 ENSCAFG00845005580 ##22 ENSCAFG00845005562 ENSCAFG00845005544 RACK1 (ENSCAFG00845005488) TRIM41 (ENSCAFG00845005431) TRIM7 (ENSCAFG00845005395) ENSCAFG00845005382 OR2T26 (ENSCAFG00845005372) BTNL9 (ENSCAFG00845005351) ENSCAFG00845005321 ENSCAFG00845005305 Red fox MODERN SPECIES 302 ENSVVUG00000002740 ##22 ENSVVUG00000002750 ##22 ENSVVUG00000002784 ##22 RACK1 (ENSVVUG00000002788) TRIM41 (ENSVVUG00000002803) TRIM7 (ENSVVUG00000002810) ENSVVUG00000002817 ENSVVUG00000002822 BTNL9 (ENSVVUG00000002828) ENSVVUG00000002843 ZFP62 (ENSVVUG00000002852) SNRPG (ENSVVUG00000002858) MGAT1 (ENSVVUG00000002865) Caniformia_b ANCESTRAL SPECIES 59 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 Mustelinae ANCESTRAL SPECIES 152 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000162327 ENSGT00940000161175 ENSGT00390000018500.a ENSGT00570000079564 Ferret DUPLICATION Ferret MODERN SPECIES 503 ENSMPUG00000019279 ##22 ENSMPUG00000001104 ##22 ENSMPUG00000001105 ENSMPUG00000001148 TRIM41 (ENSMPUG00000001186) TRIM7 (ENSMPUG00000001212) ENSMPUG00000019280 ENSMPUG00000019281 BTNL9 (ENSMPUG00000001213) ZFP62 (ENSMPUG00000001214) MGAT1 (ENSMPUG00000001215) PGBD2 (ENSMPUG00000001218) ZNF692 (ENSMPUG00000001221) SH3BP5L (ENSMPUG00000001243) LYPD8 (ENSMPUG00000001253) Ferret MODERN SPECIES 503 ENSMPUG00000019279 ##22 ENSMPUG00000001104 ##22 ENSMPUG00000001105 ENSMPUG00000001148 TRIM41 (ENSMPUG00000001186) TRIM7 (ENSMPUG00000001212) ENSMPUG00000019280 ENSMPUG00000019281 BTNL9 (ENSMPUG00000001213) ZFP62 (ENSMPUG00000001214) MGAT1 (ENSMPUG00000001215) PGBD2 (ENSMPUG00000001218) ZNF692 (ENSMPUG00000001221) SH3BP5L (ENSMPUG00000001243) LYPD8 (ENSMPUG00000001253) American mink MODERN SPECIES 546 ENSNVIG00000007034 ##22 ENSNVIG00000007046 ##22 ENSNVIG00000007097 TRIM52 (ENSNVIG00000007117) ENSNVIG00000007124 TRIM41 (ENSNVIG00000007141) TRIM7 (ENSNVIG00000007179) ENSNVIG00000007247 ENSNVIG00000007271 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 51 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 Ursus ANCESTRAL SPECIES 259 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.b.a ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 Polar bear MODERN SPECIES 390 ENSUMAG00000025015 ENSUMAG00000025016 ENSUMAG00000025017 ENSUMAG00000025018 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025023 ##22 American black bear MODERN SPECIES 5769 ENSUAMG00000010853 ##22 ENSUAMG00000010869 ##22 Giant Panda MODERN SPECIES 13 GFPT2 (ENSAMEG00000000889) CNOT6 (ENSAMEG00000000949) ENSAMEG00000026585 ENSAMEG00000000972 ENSAMEG00000000974 ENSAMEG00000027505 ENSAMEG00000019809 ENSAMEG00000027968 ENSAMEG00000026034 ENSAMEG00000026408 ENSAMEG00000019860 ENSAMEG00000014070 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000001281 ##22 ENSAMEG00000025627 ENSAMEG00000000003 ENSAMEG00000000004 TRIM41 (ENSAMEG00000000005) TRIM7 (ENSAMEG00000029192) ENSAMEG00000029392 BTNL9 (ENSAMEG00000015008) ENSAMEG00000015006 ENSAMEG00000020052 ENSAMEG00000015004 ENSAMEG00000019261 ZNF692 (ENSAMEG00000017607) ENSAMEG00000019253 Ursidae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.b.a.d ##22 Giant Panda MODERN SPECIES 307 ENSAMEG00000030403 ##22 ENSAMEG00000024394 ##22 ENSAMEG00000029214 ##22 ENSAMEG00000003457 ##22 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b Canidae ANCESTRAL SPECIES 9 ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000162750 ENSGT00530000063632.B Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00950000182802.A.bb ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01050000245376.a.a ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00530000063632.B Dingo MODERN SPECIES 238 SQSTM1 (ENSCAFG00020002634) MRNIP (ENSCAFG00020002630) TBC1D9B (ENSCAFG00020002609) RNF130 (ENSCAFG00020002599) RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) GFPT2 (ENSCAFG00020002548) ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) FLT4 (ENSCAFG00020002415) ENSCAFG00020002411 ENSCAFG00020002403 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002301 ##22 ENSCAFG00020002291 ENSCAFG00020002248 ##22 ENSCAFG00020002229 ##22 TRIM52 (ENSCAFG00020002225) RACK1 (ENSCAFG00020002209) TRIM41 (ENSCAFG00020002200) TRIM7 (ENSCAFG00020002191) ENSCAFG00020002186 ENSCAFG00020002183 ENSCAFG00020002179 ENSCAFG00020002171 ENSCAFG00020002169 MGAT1 (ENSCAFG00020002161) Dog MODERN SPECIES 2 MGAT4B (ENSCAFG00845007711) SQSTM1 (ENSCAFG00845007599) ENSCAFG00845007488 TBC1D9B (ENSCAFG00845007248) RNF130 (ENSCAFG00845007023) RASGEF1C (ENSCAFG00845006880) MAPK9 (ENSCAFG00845006710) GFPT2 (ENSCAFG00845006488) ENSCAFG00845006420 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006015 ENSCAFG00845005841 ENSCAFG00845005821 ENSCAFG00845005800 ##22 IFGGB2 (ENSCAFG00845005769) ##22 ENSCAFG00845005718 ##22 IFGGC1 (ENSCAFG00845005668) ##22 ENSCAFG00845005621 ENSCAFG00845005606 ENSCAFG00845005580 ##22 ENSCAFG00845005562 ENSCAFG00845005544 RACK1 (ENSCAFG00845005488) TRIM41 (ENSCAFG00845005431) TRIM7 (ENSCAFG00845005395) ENSCAFG00845005382 OR2T26 (ENSCAFG00845005372) BTNL9 (ENSCAFG00845005351) ENSCAFG00845005321 ENSCAFG00845005305 Red fox MODERN SPECIES 281 RASGEF1C (ENSVVUG00000026954) MAPK9 (ENSVVUG00000026948) GFPT2 (ENSVVUG00000026945) ENSVVUG00000026942 CNOT6 (ENSVVUG00000026940) FLT4 (ENSVVUG00000026937) ENSVVUG00000026936 ENSVVUG00000026932 ##22 ENSVVUG00000026931 ##22 ENSVVUG00000026930 ##22 ENSVVUG00000026929 ##22 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00960000191257 ENSGT00940000161175 Mustelinae ANCESTRAL SPECIES 92 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.b ##22 American mink MODERN SPECIES 908 ENSNVIG00000006309 ##22 Ferret MODERN SPECIES 230 CANX (ENSMPUG00000000686) MAML1 (ENSMPUG00000000684) LTC4S (ENSMPUG00000000668) MGAT4B (ENSMPUG00000000665) SQSTM1 (ENSMPUG00000000653) MRNIP (ENSMPUG00000000636) TBC1D9B (ENSMPUG00000000629) RNF130 (ENSMPUG00000000598) RASGEF1C (ENSMPUG00000000596) MAPK9 (ENSMPUG00000000593) GFPT2 (ENSMPUG00000000590) CNOT6 (ENSMPUG00000000587) SCGB3A1 (ENSMPUG00000000584) FLT4 (ENSMPUG00000000579) ENSMPUG00000000578 ENSMPUG00000000575 ##22 ENSMPUG00000000573 ##22 Ursidae ANCESTRAL SPECIES 51 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g Ursus ANCESTRAL SPECIES 259 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.b.a ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 American black bear MODERN SPECIES 2866 ENSUAMG00000013669 ENSUAMG00000013643 ##22 ENSUAMG00000013639 ##22 ENSUAMG00000013638 ##22 ENSUAMG00000013623 ##22 Polar bear MODERN SPECIES 390 ENSUMAG00000025015 ENSUMAG00000025016 ENSUMAG00000025017 ENSUMAG00000025018 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025023 ##22 Giant Panda MODERN SPECIES 13 MAPK9 (ENSAMEG00000000853) GFPT2 (ENSAMEG00000000889) CNOT6 (ENSAMEG00000000949) ENSAMEG00000026585 ENSAMEG00000000972 ENSAMEG00000000974 ENSAMEG00000027505 ENSAMEG00000019809 ENSAMEG00000027968 ENSAMEG00000026034 ENSAMEG00000026408 ENSAMEG00000019860 ENSAMEG00000014070 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000001281 ##22 ENSAMEG00000025627 ENSAMEG00000000003 ENSAMEG00000000004 TRIM41 (ENSAMEG00000000005) TRIM7 (ENSAMEG00000029192) ENSAMEG00000029392 BTNL9 (ENSAMEG00000015008) ENSAMEG00000015006 ENSAMEG00000020052 ENSAMEG00000015004 ENSAMEG00000019261 ZNF692 (ENSAMEG00000017607) Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000017153.b ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Glires ANCESTRAL SPECIES 7 ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Rodentia ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162327 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.a ENSGT01090000260018.A.a.a.b.b ENSGT01090000259995.b.a.a.a.a.a.a ENSGT01090000259995.b.a.a.a.b Rodentia_A ANCESTRAL SPECIES 7 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT00940000154294.k.b ENSGT00940000154294.l ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00390000016270 ENSGT00390000009391.b ENSGT00940000158124 ENSGT00940000158245 ENSGT00390000017923 ENSGT00940000154451 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00940000158603 ENSGT00940000153203.A.a ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 ENSGT00940000161487 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000162570 ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 Hystricomorpha_a ANCESTRAL SPECIES 28 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000154451 ENSGT00390000017923 ENSGT00940000158245 ENSGT00940000158124 ENSGT00390000009391.b ENSGT00390000016270 Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00390000016270 ENSGT00390000009391.b ENSGT00940000158124 ENSGT00940000158245 ENSGT00390000017923 ENSGT00940000154451 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00940000158603 ENSGT00940000153203.A.a ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 ENSGT00940000161487 ENSGT00940000162330 ENSGT00940000162292 ENSGT00940000162570 ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 115 MEIKIN (ENSCLAG00000013946) FNIP1 (ENSCLAG00000015635) RAPGEF6 (ENSCLAG00000014812) CDC42SE2 (ENSCLAG00000010493) LYRM7 (ENSCLAG00000012806) HINT1 (ENSCLAG00000012693) GPX3 (ENSCLAG00000012373) TNIP1 (ENSCLAG00000012681) ANXA6 (ENSCLAG00000011840) ENSCLAG00000010402 GM2A (ENSCLAG00000010551) SLC36A3 (ENSCLAG00000013137) SLC36A2 (ENSCLAG00000012068) ENSCLAG00000017791 ##22 ENSCLAG00000010886 ##22 ENSCLAG00000017811 ##22 ENSCLAG00000011265 ##22 N4BP3 (ENSCLAG00000013512) RMND5B (ENSCLAG00000012053) NHP2 (ENSCLAG00000016005) HNRNPAB (ENSCLAG00000011022) PHYKPL (ENSCLAG00000014481) COL23A1 (ENSCLAG00000011420) CLK4 (ENSCLAG00000013604) ZNF354A (ENSCLAG00000014648) ENSCLAG00000010643 ENSCLAG00000017710 ZNF354B (ENSCLAG00000013514) ZFP2 (ENSCLAG00000011174) ENSCLAG00000010435 ENSCLAG00000010195 Long-tailed chinchilla MODERN SPECIES 115 FNIP1 (ENSCLAG00000015635) RAPGEF6 (ENSCLAG00000014812) CDC42SE2 (ENSCLAG00000010493) LYRM7 (ENSCLAG00000012806) HINT1 (ENSCLAG00000012693) GPX3 (ENSCLAG00000012373) TNIP1 (ENSCLAG00000012681) ANXA6 (ENSCLAG00000011840) ENSCLAG00000010402 GM2A (ENSCLAG00000010551) SLC36A3 (ENSCLAG00000013137) SLC36A2 (ENSCLAG00000012068) ENSCLAG00000017791 ##22 ENSCLAG00000010886 ##22 ENSCLAG00000017811 ##22 ENSCLAG00000011265 ##22 N4BP3 (ENSCLAG00000013512) RMND5B (ENSCLAG00000012053) NHP2 (ENSCLAG00000016005) HNRNPAB (ENSCLAG00000011022) PHYKPL (ENSCLAG00000014481) COL23A1 (ENSCLAG00000011420) CLK4 (ENSCLAG00000013604) ZNF354A (ENSCLAG00000014648) ENSCLAG00000010643 ENSCLAG00000017710 ZNF354B (ENSCLAG00000013514) ZFP2 (ENSCLAG00000011174) ENSCLAG00000010435 ENSCLAG00000010195 GRM6 (ENSCLAG00000015195) Guinea pig DUPLICATION Guinea pig MODERN SPECIES 81 ACSL6 (ENSCPOG00000012748) FNIP1 (ENSCPOG00000030775) RAPGEF6 (ENSCPOG00000010242) CDC42SE2 (ENSCPOG00000039035) ENSCPOG00000000849 LYRM7 (ENSCPOG00000039454) HINT1 (ENSCPOG00000023046) GPX3 (ENSCPOG00000006611) TNIP1 (ENSCPOG00000006613) ANXA6 (ENSCPOG00000005272) CCDC69 (ENSCPOG00000031762) GM2A (ENSCPOG00000040130) SLC36A3 (ENSCPOG00000009677) SLC36A2 (ENSCPOG00000008306) ENSCPOG00000034918 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000025531 ##22 Guinea pig MODERN SPECIES 81 CDC42SE2 (ENSCPOG00000039035) ENSCPOG00000000849 LYRM7 (ENSCPOG00000039454) HINT1 (ENSCPOG00000023046) GPX3 (ENSCPOG00000006611) TNIP1 (ENSCPOG00000006613) ANXA6 (ENSCPOG00000005272) CCDC69 (ENSCPOG00000031762) GM2A (ENSCPOG00000040130) SLC36A3 (ENSCPOG00000009677) SLC36A2 (ENSCPOG00000008306) ENSCPOG00000034918 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000025531 ##22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 23 RAPGEF6 (ENSHGLG00000009326) CDC42SE2 (ENSHGLG00000046813) HINT1 (ENSHGLG00000035928) ENSHGLG00000010810 GPX3 (ENSHGLG00000050015) TNIP1 (ENSHGLG00000016203) ANXA6 (ENSHGLG00000019363) CCDC69 (ENSHGLG00000043600) ENSHGLG00000047632 SLC36A3 (ENSHGLG00000034529) ENSHGLG00000015897 ENSHGLG00000034913 ##22 ENSHGLG00000037097 ##22 ENSHGLG00000048856 ##22 ENSHGLG00000036718 ENSHGLG00000017987 ##22 ENSHGLG00000017675 RMND5B (ENSHGLG00000032587) NHP2 (ENSHGLG00000043955) HNRNPAB (ENSHGLG00000014490) PHYKPL (ENSHGLG00000018644) COL23A1 (ENSHGLG00000039641) ENSHGLG00000013793 ZNF354A (ENSHGLG00000005975) ENSHGLG00000039978 ENSHGLG00000045105 ENSHGLG00000032445 ENSHGLG00000009648 ENSHGLG00000034750 ENSHGLG00000033241 ENSHGLG00000047455 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000045572 ENSHGLG00000008395 RAPGEF6 (ENSHGLG00000009326) CDC42SE2 (ENSHGLG00000046813) HINT1 (ENSHGLG00000035928) ENSHGLG00000010810 GPX3 (ENSHGLG00000050015) TNIP1 (ENSHGLG00000016203) ANXA6 (ENSHGLG00000019363) CCDC69 (ENSHGLG00000043600) ENSHGLG00000047632 SLC36A3 (ENSHGLG00000034529) ENSHGLG00000015897 ENSHGLG00000034913 ##22 ENSHGLG00000037097 ##22 ENSHGLG00000048856 ##22 ENSHGLG00000036718 ENSHGLG00000017987 ##22 ENSHGLG00000017675 RMND5B (ENSHGLG00000032587) NHP2 (ENSHGLG00000043955) HNRNPAB (ENSHGLG00000014490) PHYKPL (ENSHGLG00000018644) COL23A1 (ENSHGLG00000039641) ENSHGLG00000013793 ZNF354A (ENSHGLG00000005975) ENSHGLG00000039978 ENSHGLG00000045105 ENSHGLG00000032445 ENSHGLG00000009648 ENSHGLG00000034750 Rodentia_B ANCESTRAL SPECIES 77 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Myomorpha DUPLICATION Myomorpha ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.i ##22 Muroidea ANCESTRAL SPECIES 146 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d ##22 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b ENSGT01090000260044.D.b.a.a Cricetidae ANCESTRAL SPECIES ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260018.A.a.a.b.b.l Cricetinae ANCESTRAL SPECIES ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b Chinese hamster chok1gshd MODERN SPECIES 229 Glra1 (ENSCGRG00001018124) ENSCGRG00001021201 Nmur2 (ENSCGRG00001022445) Gria1 (ENSCGRG00001010996) ENSCGRG00001021245 Fam114a2 (ENSCGRG00001019860) Mfap3 (ENSCGRG00001023022) Galnt10 (ENSCGRG00001024161) Sap30l (ENSCGRG00001023382) Hand1 (ENSCGRG00001013396) Larp1 (ENSCGRG00001016913) Gm12248 (ENSCGRG00001013725) Cnot8 (ENSCGRG00001014687) Gemin5 (ENSCGRG00001019095) Mrpl22 (ENSCGRG00001019966) ENSCGRG00001011027 ##22 Igtp (ENSCGRG00001015722) ##22 Irgm2 (ENSCGRG00001007676) ##22 4930438A08Rik (ENSCGRG00001018400) Zfp692 (ENSCGRG00001021445) Zfp672 (ENSCGRG00001004468) ENSCGRG00001011084 Lypd8 (ENSCGRG00001012127) ENSCGRG00001024373 Lypd9 (ENSCGRG00001001712) Or2z2 (ENSCGRG00001005918) ENSCGRG00001005085 Or2av9 (ENSCGRG00001006696) ENSCGRG00001009578 ENSCGRG00001009157 Or2ab1 (ENSCGRG00001013768) Cricetidae_B ANCESTRAL SPECIES ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000260018.A.a.a.b.b.l ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b Northern American deer mouse MODERN SPECIES 21 Sparc (ENSPEMG00000022374) Atox1 (ENSPEMG00000015125) G3bp1 (ENSPEMG00000020531) Glra1 (ENSPEMG00000024408) Nmur2 (ENSPEMG00000013761) Gria1 (ENSPEMG00000020992) Fam114a2 (ENSPEMG00000020352) Mfap3 (ENSPEMG00000029755) Galnt10 (ENSPEMG00000021112) Sap30l (ENSPEMG00000029956) Hand1 (ENSPEMG00000021867) Larp1 (ENSPEMG00000022523) Cnot8 (ENSPEMG00000021153) Gemin5 (ENSPEMG00000014992) Mrpl22 (ENSPEMG00000021188) ENSPEMG00000028084 ##22 ENSPEMG00000028532 ENSPEMG00000028425 ##22 ENSPEMG00000022636 ##22 4930438A08Rik (ENSPEMG00000021874) Zfp692 (ENSPEMG00000013950) Zfp672 (ENSPEMG00000028923) Sh3bp5l (ENSPEMG00000030308) ENSPEMG00000023697 1810065E05Rik (ENSPEMG00000021797) ENSPEMG00000028927 Lypd9 (ENSPEMG00000022775) Or2z2 (ENSPEMG00000004720) ENSPEMG00000014988 ENSPEMG00000030990 ENSPEMG00000026900 Murinae ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.i ##22 Mus ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.i ##22 Mus_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.i ##22 Mus_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.i ##22 Mus_C ANCESTRAL SPECIES 3 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.m ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Steppe mouse MODERN SPECIES 2392 Larp1 (ENSMSIG00000003419) ENSMSIG00000003363 Gm12248 (ENSMSIG00000003301) ENSMSIG00000003265 Gemin5 (ENSMSIG00000003034) Mrpl22 (ENSMSIG00000002988) ENSMSIG00000002969 ##22 Irgm2 (ENSMSIG00000002954) ##22 4930438A08Rik (ENSMSIG00000002887) Zfp692 (ENSMSIG00000002854) Zfp672 (ENSMSIG00000002838) ENSMSIG00000002826 Sh3bp5l (ENSMSIG00000002756) Lypd8 (ENSMSIG00000002688) Myomorpha DUPLICATION Myomorpha ANCESTRAL SPECIES 82 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b ##22 Muroidea ANCESTRAL SPECIES 10 ENSGT00940000158978 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345 ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000159087 Muroidea_A ANCESTRAL SPECIES 1 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Cricetidae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000159087 Cricetidae_B ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000159087 ENSGT00940000159624 ENSGT00940000161042 ENSGT00390000011705 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 21 Or2y1d (ENSPEMG00000030040) Or2y17 (ENSPEMG00000030604) Or2y1e (ENSPEMG00000024557) ENSPEMG00000029606 ENSPEMG00000031159 ENSPEMG00000028956 Mgat1 (ENSPEMG00000005968) Zfp62 (ENSPEMG00000012272) Btnl9 (ENSPEMG00000015855) Or2o1 (ENSPEMG00000008066) Or2t26 (ENSPEMG00000007090) Or2v1 (ENSPEMG00000025959) Or2v2 (ENSPEMG00000025836) Ifi47 (ENSPEMG00000017464) ##22 ENSPEMG00000029540 ENSPEMG00000018053 ##22 ENSPEMG00000015679 ##22 ENSPEMG00000028500 ##22 Irgm1 (ENSPEMG00000018645) ##22 Trim7 (ENSPEMG00000012640) Trim41 (ENSPEMG00000017879) Rack1 (ENSPEMG00000011124) ENSPEMG00000027931 Sgcd (ENSPEMG00000011649) Timd4 (ENSPEMG00000012210) ENSPEMG00000030816 ENSPEMG00000024940 ENSPEMG00000025066 ENSPEMG00000028909 ENSPEMG00000019712 ENSPEMG00000029530 Northern American deer mouse MODERN SPECIES 21 Or2y1e (ENSPEMG00000024557) ENSPEMG00000029606 ENSPEMG00000031159 ENSPEMG00000028956 Mgat1 (ENSPEMG00000005968) Zfp62 (ENSPEMG00000012272) Btnl9 (ENSPEMG00000015855) Or2o1 (ENSPEMG00000008066) Or2t26 (ENSPEMG00000007090) Or2v1 (ENSPEMG00000025959) Or2v2 (ENSPEMG00000025836) Ifi47 (ENSPEMG00000017464) ##22 ENSPEMG00000029540 ENSPEMG00000018053 ##22 ENSPEMG00000015679 ##22 ENSPEMG00000028500 ##22 Irgm1 (ENSPEMG00000018645) ##22 Trim7 (ENSPEMG00000012640) Trim41 (ENSPEMG00000017879) Rack1 (ENSPEMG00000011124) ENSPEMG00000027931 Sgcd (ENSPEMG00000011649) Timd4 (ENSPEMG00000012210) ENSPEMG00000030816 ENSPEMG00000024940 ENSPEMG00000025066 ENSPEMG00000028909 ENSPEMG00000019712 ENSPEMG00000029530 Havcr2 (ENSPEMG00000019286) Med7 (ENSPEMG00000019778) Cricetinae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001005846 ENSCGRG00001006876 Or2y16 (ENSCGRG00001011387) Or2y1d (ENSCGRG00001007708) Or2y17 (ENSCGRG00001009532) Or2y1e (ENSCGRG00001007503) ENSCGRG00001007853 Mgat1 (ENSCGRG00001009916) Btnl9 (ENSCGRG00001004215) Or2o1 (ENSCGRG00001008440) Or2t26 (ENSCGRG00001007197) Or2v1 (ENSCGRG00001006442) Or2v2 (ENSCGRG00001005579) Ifi47 (ENSCGRG00001001682) ##22 ENSCGRG00001005773 ##22 ENSCGRG00001006408 ##22 ENSCGRG00001022428 ##22 Irgm1 (ENSCGRG00001012432) ##22 Trim7 (ENSCGRG00001021678) Trim41 (ENSCGRG00001016698) Rack1 (ENSCGRG00001015886) ENSCGRG00001011288 ENSCGRG00001023359 Sgcd (ENSCGRG00001013442) Timd4 (ENSCGRG00001009908) Havcr1 (ENSCGRG00001022176) ENSCGRG00001019450 Havcr2 (ENSCGRG00001019621) Med7 (ENSCGRG00001003660) Garin3 (ENSCGRG00001015508) Itk (ENSCGRG00001015051) Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001004527 ENSCGRG00001005846 ENSCGRG00001006876 Or2y16 (ENSCGRG00001011387) Or2y1d (ENSCGRG00001007708) Or2y17 (ENSCGRG00001009532) Or2y1e (ENSCGRG00001007503) ENSCGRG00001007853 Mgat1 (ENSCGRG00001009916) Btnl9 (ENSCGRG00001004215) Or2o1 (ENSCGRG00001008440) Or2t26 (ENSCGRG00001007197) Or2v1 (ENSCGRG00001006442) Or2v2 (ENSCGRG00001005579) Ifi47 (ENSCGRG00001001682) ##22 ENSCGRG00001005773 ##22 ENSCGRG00001006408 ##22 ENSCGRG00001022428 ##22 Irgm1 (ENSCGRG00001012432) ##22 Trim7 (ENSCGRG00001021678) Trim41 (ENSCGRG00001016698) Rack1 (ENSCGRG00001015886) ENSCGRG00001011288 ENSCGRG00001023359 Sgcd (ENSCGRG00001013442) Timd4 (ENSCGRG00001009908) Havcr1 (ENSCGRG00001022176) ENSCGRG00001019450 Havcr2 (ENSCGRG00001019621) Med7 (ENSCGRG00001003660) Garin3 (ENSCGRG00001015508) Murinae ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 Mus ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 Mus_A ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B Mus_B ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A Mouse DUPLICATION Mouse MODERN SPECIES 2 Or2y1d (ENSMUSG00000107573) Or2y17 (ENSMUSG00000045421) Or2y1e (ENSMUSG00000101874) Or2y1b (ENSMUSG00000100923) Or2y1f (ENSMUSG00000101750) Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Dppa1 (ENSMUSG00000064010) Mouse MODERN SPECIES 2 Or2y15 (ENSMUSG00000063386) Or2y16 (ENSMUSG00000047702) Or2y1d (ENSMUSG00000107573) Or2y17 (ENSMUSG00000045421) Or2y1e (ENSMUSG00000101874) Or2y1b (ENSMUSG00000100923) Or2y1f (ENSMUSG00000101750) Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000159358 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A Steppe mouse MODERN SPECIES 1608 ENSMSIG00000000187 ##22 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017119 MGP_SPRETEiJ_G0017118 MGP_SPRETEiJ_G0017117 Or2y15 (MGP_SPRETEiJ_G0017116) MGP_SPRETEiJ_G0017115 Or2y1d (MGP_SPRETEiJ_G0017114) Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Ryukyu mouse MODERN SPECIES 2 Flt4 (MGP_CAROLIEiJ_G0016275) MGP_CAROLIEiJ_G0016274 MGP_CAROLIEiJ_G0016273 MGP_CAROLIEiJ_G0016272 Or2y15 (MGP_CAROLIEiJ_G0016271) Or2y16 (MGP_CAROLIEiJ_G0016270) Or2y1d (MGP_CAROLIEiJ_G0016269) Or2y1e (MGP_CAROLIEiJ_G0016268) Mgat1 (MGP_CAROLIEiJ_G0016267) Zfp62 (MGP_CAROLIEiJ_G0016266) Btnl9 (MGP_CAROLIEiJ_G0016265) Or2o1 (MGP_CAROLIEiJ_G0016264) Or2t26 (MGP_CAROLIEiJ_G0016263) Or2v1 (MGP_CAROLIEiJ_G0016262) Ifi47 (MGP_CAROLIEiJ_G0016261) ##22 MGP_CAROLIEiJ_G0016260 ##22 MGP_CAROLIEiJ_G0016258 ##22 MGP_CAROLIEiJ_G0016257 ##22 Irgm1 (MGP_CAROLIEiJ_G0016256) ##22 Trim7 (MGP_CAROLIEiJ_G0016255) Trim41 (MGP_CAROLIEiJ_G0016254) Rack1 (MGP_CAROLIEiJ_G0016253) Sgcd (MGP_CAROLIEiJ_G0016252) Timd4 (MGP_CAROLIEiJ_G0016251) Havcr1 (MGP_CAROLIEiJ_G0016250) MGP_CAROLIEiJ_G0016249 Dppa1 (MGP_CAROLIEiJ_G0016248) BC053393 (MGP_CAROLIEiJ_G0016247) Gm12169 (MGP_CAROLIEiJ_G0016246) Havcr2 (MGP_CAROLIEiJ_G0016245) Med7 (MGP_CAROLIEiJ_G0016244) Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 5 Rack1 (MGP_PahariEiJ_G0017389) Trim41 (MGP_PahariEiJ_G0017390) Trim7 (MGP_PahariEiJ_G0017391) Irgm1 (MGP_PahariEiJ_G0017392) ##22 Or2v1 (MGP_PahariEiJ_G0017393) Ifi47 (MGP_PahariEiJ_G0017394) ##22 MGP_PahariEiJ_G0017395 MGP_PahariEiJ_G0017396 Or2t26 (MGP_PahariEiJ_G0017397) Or2o1 (MGP_PahariEiJ_G0017398) MGP_PahariEiJ_G0017399 Zfp62 (MGP_PahariEiJ_G0017400) Mgat1 (MGP_PahariEiJ_G0017401) MGP_PahariEiJ_G0017402 Or2y1e (MGP_PahariEiJ_G0017403) MGP_PahariEiJ_G0017404 ##22 MGP_PahariEiJ_G0017405 ##22 Or2y1d (MGP_PahariEiJ_G0017406) Or2y16 (MGP_PahariEiJ_G0017407) Or2y15 (MGP_PahariEiJ_G0017408) MGP_PahariEiJ_G0017409 MGP_PahariEiJ_G0017410 Flt4 (MGP_PahariEiJ_G0017411) Scgb3a1 (MGP_PahariEiJ_G0017412) Cnot6 (MGP_PahariEiJ_G0017413) Gfpt2 (MGP_PahariEiJ_G0017414) Mapk9 (MGP_PahariEiJ_G0017415) Rasgef1c (MGP_PahariEiJ_G0017416) Rnf130 (MGP_PahariEiJ_G0017417) Tbc1d9b (MGP_PahariEiJ_G0017418) Mrnip (MGP_PahariEiJ_G0017419) Shrew mouse MODERN SPECIES 5 Trim41 (MGP_PahariEiJ_G0017390) Trim7 (MGP_PahariEiJ_G0017391) Irgm1 (MGP_PahariEiJ_G0017392) ##22 Or2v1 (MGP_PahariEiJ_G0017393) Ifi47 (MGP_PahariEiJ_G0017394) ##22 MGP_PahariEiJ_G0017395 MGP_PahariEiJ_G0017396 Or2t26 (MGP_PahariEiJ_G0017397) Or2o1 (MGP_PahariEiJ_G0017398) MGP_PahariEiJ_G0017399 Zfp62 (MGP_PahariEiJ_G0017400) Mgat1 (MGP_PahariEiJ_G0017401) MGP_PahariEiJ_G0017402 Or2y1e (MGP_PahariEiJ_G0017403) MGP_PahariEiJ_G0017404 ##22 MGP_PahariEiJ_G0017405 ##22 Or2y1d (MGP_PahariEiJ_G0017406) Or2y16 (MGP_PahariEiJ_G0017407) Or2y15 (MGP_PahariEiJ_G0017408) MGP_PahariEiJ_G0017409 MGP_PahariEiJ_G0017410 Flt4 (MGP_PahariEiJ_G0017411) Scgb3a1 (MGP_PahariEiJ_G0017412) Cnot6 (MGP_PahariEiJ_G0017413) Gfpt2 (MGP_PahariEiJ_G0017414) Mapk9 (MGP_PahariEiJ_G0017415) Rasgef1c (MGP_PahariEiJ_G0017416) Rnf130 (MGP_PahariEiJ_G0017417) Tbc1d9b (MGP_PahariEiJ_G0017418) Mrnip (MGP_PahariEiJ_G0017419) Sqstm1 (MGP_PahariEiJ_G0017420) Upper Galilee mountains blind mole rat MODERN SPECIES 1306 ENSNGAG00000013991 Or2y1d (ENSNGAG00000013420) Or2y1e (ENSNGAG00000013882) ENSNGAG00000013552 Mgat1 (ENSNGAG00000021645) Btnl9 (ENSNGAG00000023753) Or2t26 (ENSNGAG00000014682) Or2v1 (ENSNGAG00000013833) ENSNGAG00000022536 ENSNGAG00000024187 Ifi47 (ENSNGAG00000023999) ##22 ENSNGAG00000021197 ##22 ENSNGAG00000021829 ##22 Irgm1 (ENSNGAG00000013043) ##22 Trim7 (ENSNGAG00000023925) Trim41 (ENSNGAG00000023272) Rack1 (ENSNGAG00000003406) Sgcd (ENSNGAG00000022742) Timd4 (ENSNGAG00000023712) Myomorpha ANCESTRAL SPECIES 82 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b ##22 Muroidea ANCESTRAL SPECIES 10 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345 ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000159087 ENSGT00940000159624 Muroidea_A ANCESTRAL SPECIES 1 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 Murinae ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 Mus ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 Mus_B DUPLICATION Mus_B DUPLICATION Mus_B ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 Mouse MODERN SPECIES 2 Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Dppa1 (ENSMUSG00000064010) BC053393 (ENSMUSG00000046974) Gm12169 (ENSMUSG00000078924) Havcr2 (ENSMUSG00000020399) Med7 (ENSMUSG00000020397) Garin3 (ENSMUSG00000020401) Mus_C ANCESTRAL SPECIES 3 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 Steppe mouse MODERN SPECIES 26 ENSMSIG00000000072 ##22 Gm5431 (ENSMSIG00000000138) ##22 Irgm1 (ENSMSIG00000000152) ##22 Trim7 (ENSMSIG00000000211) Trim41 (ENSMSIG00000000264) Rack1 (ENSMSIG00000000343) ENSMSIG00000000438 ENSMSIG00000000464 ENSMSIG00000000474 Sgcd (ENSMSIG00000000535) ENSMSIG00000000620 Timd4 (ENSMSIG00000000632) Havcr1 (ENSMSIG00000000666) Timd2 (ENSMSIG00000000775) Dppa1 (ENSMSIG00000000898) BC053393 (ENSMSIG00000000932) Gm12169 (ENSMSIG00000000970) Mus_B DUPLICATION Mus_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.b.a ##22 Mouse MODERN SPECIES 2 Or2y1e (ENSMUSG00000101874) Or2y1b (ENSMUSG00000100923) Or2y1f (ENSMUSG00000101750) Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Dppa1 (ENSMUSG00000064010) BC053393 (ENSMUSG00000046974) Gm12169 (ENSMUSG00000078924) Mus_C ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.b.a ##22 Steppe mouse MODERN SPECIES 1793 9930111J21Rik1 (ENSMSIG00000027407) ##22 Mus_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.b.b ##22 Mouse MODERN SPECIES 2 Or2y16 (ENSMUSG00000047702) Or2y1d (ENSMUSG00000107573) Or2y17 (ENSMUSG00000045421) Or2y1e (ENSMUSG00000101874) Or2y1b (ENSMUSG00000100923) Or2y1f (ENSMUSG00000101750) Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Mus_B ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 Mouse MODERN SPECIES 2 Or2y1f (ENSMUSG00000101750) Or2y1g (ENSMUSG00000059864) Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Dppa1 (ENSMUSG00000064010) BC053393 (ENSMUSG00000046974) Gm12169 (ENSMUSG00000078924) Havcr2 (ENSMUSG00000020399) Med7 (ENSMUSG00000020397) Mus_C ANCESTRAL SPECIES 3 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 spretus DUPLICATION spretus DUPLICATION spretus MODERN SPECIES 2 Or2y1d (MGP_SPRETEiJ_G0017114) Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Gm12169 (MGP_SPRETEiJ_G0017087) Havcr2 (MGP_SPRETEiJ_G0017086) Med7 (MGP_SPRETEiJ_G0017085) Garin3 (MGP_SPRETEiJ_G0017084) Itk (MGP_SPRETEiJ_G0017083) spretus MODERN SPECIES 2 Or2y15 (MGP_SPRETEiJ_G0017116) MGP_SPRETEiJ_G0017115 Or2y1d (MGP_SPRETEiJ_G0017114) Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Gm12169 (MGP_SPRETEiJ_G0017087) Havcr2 (MGP_SPRETEiJ_G0017086) Med7 (MGP_SPRETEiJ_G0017085) spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017117 Or2y15 (MGP_SPRETEiJ_G0017116) MGP_SPRETEiJ_G0017115 Or2y1d (MGP_SPRETEiJ_G0017114) Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Gm12169 (MGP_SPRETEiJ_G0017087) Havcr2 (MGP_SPRETEiJ_G0017086) Steppe mouse MODERN SPECIES 26 ENSMSIG00000000072 ##22 Gm5431 (ENSMSIG00000000138) ##22 Irgm1 (ENSMSIG00000000152) ##22 Trim7 (ENSMSIG00000000211) Trim41 (ENSMSIG00000000264) Rack1 (ENSMSIG00000000343) ENSMSIG00000000438 ENSMSIG00000000464 ENSMSIG00000000474 Sgcd (ENSMSIG00000000535) ENSMSIG00000000620 Timd4 (ENSMSIG00000000632) Havcr1 (ENSMSIG00000000666) Timd2 (ENSMSIG00000000775) Dppa1 (ENSMSIG00000000898) BC053393 (ENSMSIG00000000932) Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0016273 MGP_CAROLIEiJ_G0016272 Or2y15 (MGP_CAROLIEiJ_G0016271) Or2y16 (MGP_CAROLIEiJ_G0016270) Or2y1d (MGP_CAROLIEiJ_G0016269) Or2y1e (MGP_CAROLIEiJ_G0016268) Mgat1 (MGP_CAROLIEiJ_G0016267) Zfp62 (MGP_CAROLIEiJ_G0016266) Btnl9 (MGP_CAROLIEiJ_G0016265) Or2o1 (MGP_CAROLIEiJ_G0016264) Or2t26 (MGP_CAROLIEiJ_G0016263) Or2v1 (MGP_CAROLIEiJ_G0016262) Ifi47 (MGP_CAROLIEiJ_G0016261) ##22 MGP_CAROLIEiJ_G0016260 ##22 MGP_CAROLIEiJ_G0016258 ##22 MGP_CAROLIEiJ_G0016257 ##22 Irgm1 (MGP_CAROLIEiJ_G0016256) ##22 Trim7 (MGP_CAROLIEiJ_G0016255) Trim41 (MGP_CAROLIEiJ_G0016254) Rack1 (MGP_CAROLIEiJ_G0016253) Sgcd (MGP_CAROLIEiJ_G0016252) Timd4 (MGP_CAROLIEiJ_G0016251) Havcr1 (MGP_CAROLIEiJ_G0016250) MGP_CAROLIEiJ_G0016249 Dppa1 (MGP_CAROLIEiJ_G0016248) BC053393 (MGP_CAROLIEiJ_G0016247) Gm12169 (MGP_CAROLIEiJ_G0016246) Havcr2 (MGP_CAROLIEiJ_G0016245) Med7 (MGP_CAROLIEiJ_G0016244) Garin3 (MGP_CAROLIEiJ_G0016243) Itk (MGP_CAROLIEiJ_G0016242) Mus_A ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0016274 MGP_CAROLIEiJ_G0016273 MGP_CAROLIEiJ_G0016272 Or2y15 (MGP_CAROLIEiJ_G0016271) Or2y16 (MGP_CAROLIEiJ_G0016270) Or2y1d (MGP_CAROLIEiJ_G0016269) Or2y1e (MGP_CAROLIEiJ_G0016268) Mgat1 (MGP_CAROLIEiJ_G0016267) Zfp62 (MGP_CAROLIEiJ_G0016266) Btnl9 (MGP_CAROLIEiJ_G0016265) Or2o1 (MGP_CAROLIEiJ_G0016264) Or2t26 (MGP_CAROLIEiJ_G0016263) Or2v1 (MGP_CAROLIEiJ_G0016262) Ifi47 (MGP_CAROLIEiJ_G0016261) ##22 MGP_CAROLIEiJ_G0016260 ##22 MGP_CAROLIEiJ_G0016258 ##22 MGP_CAROLIEiJ_G0016257 ##22 Irgm1 (MGP_CAROLIEiJ_G0016256) ##22 Trim7 (MGP_CAROLIEiJ_G0016255) Trim41 (MGP_CAROLIEiJ_G0016254) Rack1 (MGP_CAROLIEiJ_G0016253) Sgcd (MGP_CAROLIEiJ_G0016252) Timd4 (MGP_CAROLIEiJ_G0016251) Havcr1 (MGP_CAROLIEiJ_G0016250) MGP_CAROLIEiJ_G0016249 Dppa1 (MGP_CAROLIEiJ_G0016248) BC053393 (MGP_CAROLIEiJ_G0016247) Gm12169 (MGP_CAROLIEiJ_G0016246) Havcr2 (MGP_CAROLIEiJ_G0016245) Med7 (MGP_CAROLIEiJ_G0016244) Garin3 (MGP_CAROLIEiJ_G0016243) Mus_B ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B Mus_C ANCESTRAL SPECIES 3 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017115 Or2y1d (MGP_SPRETEiJ_G0017114) Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Gm12169 (MGP_SPRETEiJ_G0017087) Havcr2 (MGP_SPRETEiJ_G0017086) Med7 (MGP_SPRETEiJ_G0017085) Garin3 (MGP_SPRETEiJ_G0017084) Rat MODERN SPECIES 1 Or2y1e (ENSRNOG00000064091) Or2y1h (ENSRNOG00000070227) Or2y1g (ENSRNOG00000065390) Mgat1 (ENSRNOG00000068826) Zfp62 (ENSRNOG00000051756) Btnl9 (ENSRNOG00000046377) LOC684471 (ENSRNOG00000068423) Or2t26 (ENSRNOG00000048210) Or2v1 (ENSRNOG00000064581) Or2v2b (ENSRNOG00000064665) AC103024.1 (ENSRNOG00000031313) Or2v2 (ENSRNOG00000069499) Fam98b-ps1 (ENSRNOG00000069394) Or2v2c (ENSRNOG00000069777) Ifi47 (ENSRNOG00000002470) ##22 RGD1559575 (ENSRNOG00000032396) ##22 Irgm (ENSRNOG00000031138) ##22 Trim7 (ENSRNOG00000002469) Trim41 (ENSRNOG00000002388) Rack1 (ENSRNOG00000052620) Rpl30-ps1 (ENSRNOG00000051163) ENSRNOG00000063521 ENSRNOG00000067540 Sgcd (ENSRNOG00000002372) Timd4 (ENSRNOG00000038894) Havcr1 (ENSRNOG00000007243) ENSRNOG00000067141 Timd2 (ENSRNOG00000021345) Dppa1 (ENSRNOG00000043293) LOC689968 (ENSRNOG00000042265) LOC100359777 (ENSRNOG00000043422) Cricetidae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000159087 ENSGT00940000159624 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 Prairie vole DUPLICATION Prairie vole DUPLICATION Prairie vole MODERN SPECIES 15 Mrtfb (ENSMOCG00000022536) Ercc4 (ENSMOCG00000021533) Dhrs11 (ENSMOCG00000021713) Ggnbp2 (ENSMOCG00000014766) Pigw (ENSMOCG00000007146) Myo19 (ENSMOCG00000022671) Znhit3 (ENSMOCG00000021001) ENSMOCG00000003726 Sgcd (ENSMOCG00000022475) ENSMOCG00000002119 ENSMOCG00000019569 Trim41 (ENSMOCG00000022282) Trim7 (ENSMOCG00000012310) Irgm1 (ENSMOCG00000009734) ##22 ENSMOCG00000008024 ##22 ENSMOCG00000016393 ##22 ENSMOCG00000012574 ##22 Or2v1 (ENSMOCG00000003060) Or2t26 (ENSMOCG00000003090) Btnl9 (ENSMOCG00000022810) Zfp62 (ENSMOCG00000020277) Mgat1 (ENSMOCG00000018641) ENSMOCG00000002296 ENSMOCG00000001892 Or2y1e (ENSMOCG00000002007) ENSMOCG00000002339 ENSMOCG00000002436 Flt4 (ENSMOCG00000016968) Scgb3a1 (ENSMOCG00000018902) Cnot6 (ENSMOCG00000021662) Gfpt2 (ENSMOCG00000022580) Prairie vole MODERN SPECIES 15 Ercc4 (ENSMOCG00000021533) Dhrs11 (ENSMOCG00000021713) Ggnbp2 (ENSMOCG00000014766) Pigw (ENSMOCG00000007146) Myo19 (ENSMOCG00000022671) Znhit3 (ENSMOCG00000021001) ENSMOCG00000003726 Sgcd (ENSMOCG00000022475) ENSMOCG00000002119 ENSMOCG00000019569 Trim41 (ENSMOCG00000022282) Trim7 (ENSMOCG00000012310) Irgm1 (ENSMOCG00000009734) ##22 ENSMOCG00000008024 ##22 ENSMOCG00000016393 ##22 ENSMOCG00000012574 ##22 Or2v1 (ENSMOCG00000003060) Or2t26 (ENSMOCG00000003090) Btnl9 (ENSMOCG00000022810) Zfp62 (ENSMOCG00000020277) Mgat1 (ENSMOCG00000018641) ENSMOCG00000002296 ENSMOCG00000001892 Or2y1e (ENSMOCG00000002007) ENSMOCG00000002339 ENSMOCG00000002436 Flt4 (ENSMOCG00000016968) Scgb3a1 (ENSMOCG00000018902) Cnot6 (ENSMOCG00000021662) Gfpt2 (ENSMOCG00000022580) Mapk9 (ENSMOCG00000020546) Prairie vole MODERN SPECIES 15 Cnot6 (ENSMOCG00000021662) Scgb3a1 (ENSMOCG00000018902) Flt4 (ENSMOCG00000016968) ENSMOCG00000002436 ENSMOCG00000002339 Or2y1e (ENSMOCG00000002007) ENSMOCG00000001892 ENSMOCG00000002296 Mgat1 (ENSMOCG00000018641) Zfp62 (ENSMOCG00000020277) Btnl9 (ENSMOCG00000022810) Or2t26 (ENSMOCG00000003090) Or2v1 (ENSMOCG00000003060) ENSMOCG00000012574 ##22 ENSMOCG00000016393 ##22 ENSMOCG00000008024 ##22 Irgm1 (ENSMOCG00000009734) ##22 Trim7 (ENSMOCG00000012310) Trim41 (ENSMOCG00000022282) ENSMOCG00000019569 ENSMOCG00000002119 Sgcd (ENSMOCG00000022475) ENSMOCG00000003726 Znhit3 (ENSMOCG00000021001) Myo19 (ENSMOCG00000022671) Pigw (ENSMOCG00000007146) Ggnbp2 (ENSMOCG00000014766) Dhrs11 (ENSMOCG00000021713) Ercc4 (ENSMOCG00000021533) Mrtfb (ENSMOCG00000022536) Parn (ENSMOCG00000022211) Cricetinae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001006876 Or2y16 (ENSCGRG00001011387) Or2y1d (ENSCGRG00001007708) Or2y17 (ENSCGRG00001009532) Or2y1e (ENSCGRG00001007503) ENSCGRG00001007853 Mgat1 (ENSCGRG00001009916) Btnl9 (ENSCGRG00001004215) Or2o1 (ENSCGRG00001008440) Or2t26 (ENSCGRG00001007197) Or2v1 (ENSCGRG00001006442) Or2v2 (ENSCGRG00001005579) Ifi47 (ENSCGRG00001001682) ##22 ENSCGRG00001005773 ##22 ENSCGRG00001006408 ##22 ENSCGRG00001022428 ##22 Irgm1 (ENSCGRG00001012432) ##22 Trim7 (ENSCGRG00001021678) Trim41 (ENSCGRG00001016698) Rack1 (ENSCGRG00001015886) ENSCGRG00001011288 ENSCGRG00001023359 Sgcd (ENSCGRG00001013442) Timd4 (ENSCGRG00001009908) Havcr1 (ENSCGRG00001022176) ENSCGRG00001019450 Havcr2 (ENSCGRG00001019621) Med7 (ENSCGRG00001003660) Garin3 (ENSCGRG00001015508) Itk (ENSCGRG00001015051) Fndc9 (ENSCGRG00001007038) Upper Galilee mountains blind mole rat MODERN SPECIES 1306 ENSNGAG00000013991 Or2y1d (ENSNGAG00000013420) Or2y1e (ENSNGAG00000013882) ENSNGAG00000013552 Mgat1 (ENSNGAG00000021645) Btnl9 (ENSNGAG00000023753) Or2t26 (ENSNGAG00000014682) Or2v1 (ENSNGAG00000013833) ENSNGAG00000022536 ENSNGAG00000024187 Ifi47 (ENSNGAG00000023999) ##22 ENSNGAG00000021197 ##22 ENSNGAG00000021829 ##22 Irgm1 (ENSNGAG00000013043) ##22 Trim7 (ENSNGAG00000023925) Trim41 (ENSNGAG00000023272) Rack1 (ENSNGAG00000003406) Sgcd (ENSNGAG00000022742) Timd4 (ENSNGAG00000023712) Lesser Egyptian jerboa MODERN SPECIES 63 Zfp867 (ENSJJAG00000008459) Zkscan17 (ENSJJAG00000022828) Nlrp3 (ENSJJAG00000007323) Or2b11 (ENSJJAG00000004515) Or2aa1 (ENSJJAG00000021579) ENSJJAG00000020201 ENSJJAG00000019586 ENSJJAG00000004303 ENSJJAG00000005004 ENSJJAG00000004545 Or2y1e (ENSJJAG00000004331) ENSJJAG00000004246 Zfp62 (ENSJJAG00000002338) Btnl9 (ENSJJAG00000005353) Or2o1 (ENSJJAG00000008345) ENSJJAG00000023378 ##22 Trim7 (ENSJJAG00000021609) ENSJJAG00000002404 ENSJJAG00000021436 ENSJJAG00000023424 ENSJJAG00000004371 ENSJJAG00000023400 Sgcd (ENSJJAG00000001165) Med7 (ENSJJAG00000004613) Itk (ENSJJAG00000021816) Cyfip2 (ENSJJAG00000010781) Fndc9 (ENSJJAG00000015621) Nipal4 (ENSJJAG00000005123) ENSJJAG00000012218 Thg1l (ENSJJAG00000022909) Lsm11 (ENSJJAG00000000505) Atlantogenata ANCESTRAL SPECIES ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Afrotheria ANCESTRAL SPECIES 123 ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Afrotheria_a ANCESTRAL SPECIES 127 ENSGT01030000234648.a.b.a.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Elephant MODERN SPECIES 2 ENSLAFG00000029553 ENSLAFG00000028643 ENSLAFG00000030931 ENSLAFG00000031543 ENSLAFG00000027573 ENSLAFG00000029252 ENSLAFG00000031758 ENSLAFG00000029830 ENSLAFG00000029708 TRIM7 (ENSLAFG00000012263) ENSLAFG00000011744 RACK1 (ENSLAFG00000011750) TRIM52 (ENSLAFG00000011760) ENSLAFG00000028506 ENSLAFG00000032010 ##22 ENSLAFG00000031042 ##22 ENSLAFG00000029002 ##22 ENSLAFG00000018221 PROP1 (ENSLAFG00000004721) ENSLAFG00000017519 ZNF354A (ENSLAFG00000002909) ENSLAFG00000032636 ENSLAFG00000026032 CLK4 (ENSLAFG00000015899) COL23A1 (ENSLAFG00000030471) PHYKPL (ENSLAFG00000001190) HNRNPAB (ENSLAFG00000001189) NHP2 (ENSLAFG00000012828) RMND5B (ENSLAFG00000012824) N4BP3 (ENSLAFG00000001049) B4GALT7 (ENSLAFG00000031314) Xenarthra ANCESTRAL SPECIES 393 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b Armadillo DUPLICATION Armadillo DUPLICATION Armadillo MODERN SPECIES 2556 ENSDNOG00000036141 ##22 ENSDNOG00000047478 ##22 ENSDNOG00000046683 ##22 ENSDNOG00000045232 ##22 ENSDNOG00000037309 ##22 ENSDNOG00000040435 TRIM52 (ENSDNOG00000042088) RACK1 (ENSDNOG00000000767) TRIM41 (ENSDNOG00000000765) TRIM7 (ENSDNOG00000036990) ENSDNOG00000049195 ENSDNOG00000032410 ENSDNOG00000015279 Armadillo MODERN SPECIES 3209 ENSDNOG00000003574 ENSDNOG00000041589 ##22 ENSDNOG00000033813 ##22 ENSDNOG00000034249 ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3209 ENSDNOG00000034249 ##22 ENSDNOG00000033813 ##22 ENSDNOG00000041589 ##22 ENSDNOG00000003574 Armadillo MODERN SPECIES 2556 ENSDNOG00000036141 ##22 ENSDNOG00000047478 ##22 ENSDNOG00000046683 ##22 ENSDNOG00000045232 ##22 ENSDNOG00000037309 ##22 ENSDNOG00000040435 TRIM52 (ENSDNOG00000042088) RACK1 (ENSDNOG00000000767) TRIM41 (ENSDNOG00000000765) TRIM7 (ENSDNOG00000036990) ENSDNOG00000049195 ENSDNOG00000032410 ENSDNOG00000015279 Marsupialia ANCESTRAL SPECIES 167 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Marsupialia_b ANCESTRAL SPECIES 128 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00940000161528 ENSGT00390000013063 ENSGT00530000063947.B ENSGT00940000156789 ENSGT00940000154345.a ENSGT00940000154345.b ENSGT00390000007003 ENSGT00390000013187 ENSGT00940000161716 ENSGT00940000162000.d.a.a.b.a ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000156768 ENSGT00940000160680 ENSGT00940000163340 ENSGT00950000183009.bb ENSGT00940000154913 ENSGT00940000154951 ENSGT00940000156285 ENSGT00940000162528 ENSGT00940000158216 ENSGT00940000158585.d.a ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00940000158024.C Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00940000161528 ENSGT00390000013063 ENSGT00530000063947.B ENSGT00940000156789 ENSGT00940000154345.a ENSGT00940000154345.b ENSGT00390000007003 ENSGT00390000013187 ENSGT00940000161716 ENSGT00940000162000.d.a.a.b.a ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00950000183007.a.b.g.a.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000156768 ENSGT00940000160680 ENSGT00940000163340 ENSGT00950000183009.bb ENSGT00940000154913 ENSGT00940000154951 ENSGT00940000156285 ENSGT00940000162528 ENSGT00940000158216 ENSGT00940000158585.d.a ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00940000158024.C Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 172 ENSVURG00010015224 ##22 Common wonbat MODERN SPECIES 1007 DUSP28 (ENSVURG00010002549) PARL (ENSVURG00010002529) YEATS2 (ENSVURG00010002480) KLHL24 (ENSVURG00010002461) KLHL6 (ENSVURG00010002441) ENSVURG00010002428 IFT22 (ENSVURG00010002393) ENSVURG00010002374 ENSVURG00010002352 ADIPOQ (ENSVURG00010002346) ENSVURG00010002340 ST6GAL1 (ENSVURG00010002322) DNAJB11 (ENSVURG00010002306) TBCCD1 (ENSVURG00010002265) CRYGS (ENSVURG00010002257) ENSVURG00010002252 ##22 ENSVURG00010002246 ENSVURG00010002215 ENSVURG00010002206 ENSVURG00010002188 ENSVURG00010002174 ENSVURG00010002135 ENSVURG00010002115 ENSVURG00010001900 ENSVURG00010001862 ENSVURG00010001831 ENSVURG00010001797 ENSVURG00010001727 ENSVURG00010001598 ENSVURG00010001568 ENSVURG00010001549 Common wonbat MODERN SPECIES 3 ENSVURG00010000016 ##22 koala MODERN SPECIES 109 DUSP28 (ENSPCIG00000017779) PARL (ENSPCIG00000017778) MAP6D1 (ENSPCIG00000017777) YEATS2 (ENSPCIG00000017776) KLHL24 (ENSPCIG00000017775) ENSPCIG00000017774 KLHL6 (ENSPCIG00000017773) IFT22 (ENSPCIG00000017772) ENSPCIG00000017771 ENSPCIG00000025911 ADIPOQ (ENSPCIG00000025906) ST6GAL1 (ENSPCIG00000025903) DNAJB11 (ENSPCIG00000001393) TBCCD1 (ENSPCIG00000025901) CRYGS (ENSPCIG00000025898) ENSPCIG00000025897 ##22 ENSPCIG00000025896 ##22 ENSPCIG00000025890 ENSPCIG00000036362 ETV5 (ENSPCIG00000025881) ENSPCIG00000036870 ENSPCIG00000037087 TRA2B (ENSPCIG00000008592) IGF2BP2 (ENSPCIG00000023547) SENP2 (ENSPCIG00000002272) ENSPCIG00000002267 LIPH (ENSPCIG00000035364) MAP3K13 (ENSPCIG00000002208) ENSPCIG00000003983 EHHADH (ENSPCIG00000032050) C3orf70 (ENSPCIG00000036991) Theria ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.b ##22 Eutheria ANCESTRAL SPECIES 32 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000161175 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b.b.a ENSGT01090000260018.A.a.b.b.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154294.k.a.a.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Laurasiatheria_b ANCESTRAL SPECIES 44 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Carnivora ANCESTRAL SPECIES 33 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.a.a Caniformia DUPLICATION Caniformia DUPLICATION Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES 5 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Caniformia_b ANCESTRAL SPECIES 59 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 51 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.b.b ENSGT00960000186612.A.j.a.a Ursus ANCESTRAL SPECIES 259 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00960000186612.A.j.a.b.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.a American black bear MODERN SPECIES 2866 ENSUAMG00000013623 ##22 ENSUAMG00000013638 ##22 ENSUAMG00000013639 ##22 ENSUAMG00000013643 ##22 ENSUAMG00000013669 Polar bear MODERN SPECIES 390 ENSUMAG00000025023 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025018 ##22 ENSUMAG00000025017 ENSUMAG00000025016 ENSUMAG00000025015 Giant Panda MODERN SPECIES 13 ENSAMEG00000015004 ENSAMEG00000020052 ENSAMEG00000015006 BTNL9 (ENSAMEG00000015008) ENSAMEG00000029392 TRIM7 (ENSAMEG00000029192) TRIM41 (ENSAMEG00000000005) ENSAMEG00000000004 ENSAMEG00000000003 ENSAMEG00000025627 ENSAMEG00000001281 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000014070 ##22 ENSAMEG00000019860 ENSAMEG00000026408 ENSAMEG00000026034 ENSAMEG00000027968 ENSAMEG00000019809 ENSAMEG00000027505 ENSAMEG00000000974 ENSAMEG00000000972 ENSAMEG00000026585 CNOT6 (ENSAMEG00000000949) GFPT2 (ENSAMEG00000000889) MAPK9 (ENSAMEG00000000853) RASGEF1C (ENSAMEG00000000806) RNF130 (ENSAMEG00000008631) Ursidae ANCESTRAL SPECIES 51 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 ENSGT00940000162750 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 13 CNOT6 (ENSAMEG00000000949) ENSAMEG00000026585 ENSAMEG00000000972 ENSAMEG00000000974 ENSAMEG00000027505 ENSAMEG00000019809 ENSAMEG00000027968 ENSAMEG00000026034 ENSAMEG00000026408 ENSAMEG00000019860 ENSAMEG00000014070 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000001281 ##22 ENSAMEG00000025627 ENSAMEG00000000003 ENSAMEG00000000004 TRIM41 (ENSAMEG00000000005) TRIM7 (ENSAMEG00000029192) ENSAMEG00000029392 BTNL9 (ENSAMEG00000015008) ENSAMEG00000015006 ENSAMEG00000020052 ENSAMEG00000015004 ENSAMEG00000019261 ZNF692 (ENSAMEG00000017607) ENSAMEG00000019253 ENSAMEG00000017600 Giant Panda MODERN SPECIES 307 ENSAMEG00000030403 ##22 ENSAMEG00000024394 ##22 ENSAMEG00000029214 ##22 ENSAMEG00000003457 ##22 Ursus ANCESTRAL SPECIES 259 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b.b ENSGT00960000186612.A.j.a.b.a ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 Polar bear MODERN SPECIES 390 ENSUMAG00000025015 ENSUMAG00000025016 ENSUMAG00000025017 ENSUMAG00000025018 ##22 ENSUMAG00000025019 ##22 ENSUMAG00000025020 ##22 ENSUMAG00000025021 ##22 ENSUMAG00000025022 ##22 ENSUMAG00000025023 ##22 American black bear MODERN SPECIES 5769 ENSUAMG00000010853 ##22 ENSUAMG00000010869 ##22 Canidae ANCESTRAL SPECIES 9 ENSGT00950000182915.a.a.a ENSGT01030000236091 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000162750 Canis_lupus ANCESTRAL SPECIES 15 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00950000182802.A.bb ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01050000245376.a.a ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 Dingo MODERN SPECIES 238 MAML1 (ENSCAFG00020002665) LTC4S (ENSCAFG00020002654) MGAT4B (ENSCAFG00020002640) SQSTM1 (ENSCAFG00020002634) MRNIP (ENSCAFG00020002630) TBC1D9B (ENSCAFG00020002609) RNF130 (ENSCAFG00020002599) RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) GFPT2 (ENSCAFG00020002548) ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) FLT4 (ENSCAFG00020002415) ENSCAFG00020002411 ENSCAFG00020002403 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002301 ##22 ENSCAFG00020002291 ENSCAFG00020002248 ##22 ENSCAFG00020002229 ##22 TRIM52 (ENSCAFG00020002225) RACK1 (ENSCAFG00020002209) TRIM41 (ENSCAFG00020002200) TRIM7 (ENSCAFG00020002191) ENSCAFG00020002186 ENSCAFG00020002183 ENSCAFG00020002179 ENSCAFG00020002171 Dog MODERN SPECIES 2 MAML1 (ENSCAFG00845007951) LTC4S (ENSCAFG00845007863) MGAT4B (ENSCAFG00845007711) SQSTM1 (ENSCAFG00845007599) ENSCAFG00845007488 TBC1D9B (ENSCAFG00845007248) RNF130 (ENSCAFG00845007023) RASGEF1C (ENSCAFG00845006880) MAPK9 (ENSCAFG00845006710) GFPT2 (ENSCAFG00845006488) ENSCAFG00845006420 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006015 ENSCAFG00845005841 ENSCAFG00845005821 ENSCAFG00845005800 ##22 IFGGB2 (ENSCAFG00845005769) ##22 ENSCAFG00845005718 ##22 IFGGC1 (ENSCAFG00845005668) ##22 ENSCAFG00845005621 ENSCAFG00845005606 ENSCAFG00845005580 ##22 ENSCAFG00845005562 ENSCAFG00845005544 RACK1 (ENSCAFG00845005488) TRIM41 (ENSCAFG00845005431) TRIM7 (ENSCAFG00845005395) ENSCAFG00845005382 OR2T26 (ENSCAFG00845005372) BTNL9 (ENSCAFG00845005351) ENSCAFG00845005321 Red fox MODERN SPECIES 281 RASGEF1C (ENSVVUG00000026954) MAPK9 (ENSVVUG00000026948) GFPT2 (ENSVVUG00000026945) ENSVVUG00000026942 CNOT6 (ENSVVUG00000026940) FLT4 (ENSVVUG00000026937) ENSVVUG00000026936 ENSVVUG00000026932 ##22 ENSVVUG00000026931 ##22 ENSVVUG00000026930 ##22 ENSVVUG00000026929 ##22 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00940000163029 ENSGT00940000159358 ENSGT00420000029848.A ENSGT00900000143807 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a Canidae ANCESTRAL SPECIES 9 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000160338 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00940000153253.b.a.h ENSGT00940000159358 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a Canis_lupus ANCESTRAL SPECIES 15 ENSGT00530000063632.B ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000160338 ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01050000245376.a.a ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00940000153253.b.a.h ENSGT00940000159358 ENSGT00940000158978 ENSGT00950000182802.A.bb ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 Dingo MODERN SPECIES 238 MGAT1 (ENSCAFG00020002161) ENSCAFG00020002169 ENSCAFG00020002171 ENSCAFG00020002179 ENSCAFG00020002183 ENSCAFG00020002186 TRIM7 (ENSCAFG00020002191) TRIM41 (ENSCAFG00020002200) RACK1 (ENSCAFG00020002209) TRIM52 (ENSCAFG00020002225) ENSCAFG00020002229 ##22 ENSCAFG00020002248 ##22 ENSCAFG00020002291 ENSCAFG00020002301 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002403 ##22 ENSCAFG00020002411 FLT4 (ENSCAFG00020002415) CNOT6 (ENSCAFG00020002441) ENSCAFG00020002541 ENSCAFG00020002544 GFPT2 (ENSCAFG00020002548) MAPK9 (ENSCAFG00020002569) RASGEF1C (ENSCAFG00020002586) RNF130 (ENSCAFG00020002599) TBC1D9B (ENSCAFG00020002609) MRNIP (ENSCAFG00020002630) Red fox MODERN SPECIES 413 ENSVVUG00000001591 ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.b.a.b ##22 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000154411.`b.i.f ENSGT00940000161175 ENSGT00960000191257 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b.a ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a.b ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00940000163029 ENSGT00940000159358 ENSGT00420000029848.A ENSGT00900000143807 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00950000186148 ENSGT00390000002781 ENSGT00940000156526.a Mustelinae ANCESTRAL SPECIES 92 ENSGT00950000183007.a.b.g.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00940000163029 ENSGT00940000159358 ENSGT00420000029848.A ENSGT00900000143807 ENSGT00940000158978 ENSGT00940000156413 ENSGT00940000158327 ENSGT00940000161005 ENSGT00940000157465 ENSGT00940000158554 ENSGT00390000006124 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 Ferret MODERN SPECIES 230 ENSMPUG00000000573 ##22 ENSMPUG00000000575 ##22 ENSMPUG00000000578 FLT4 (ENSMPUG00000000579) SCGB3A1 (ENSMPUG00000000584) CNOT6 (ENSMPUG00000000587) GFPT2 (ENSMPUG00000000590) MAPK9 (ENSMPUG00000000593) RASGEF1C (ENSMPUG00000000596) RNF130 (ENSMPUG00000000598) TBC1D9B (ENSMPUG00000000629) MRNIP (ENSMPUG00000000636) SQSTM1 (ENSMPUG00000000653) MGAT4B (ENSMPUG00000000665) LTC4S (ENSMPUG00000000668) MAML1 (ENSMPUG00000000684) Caniformia ANCESTRAL SPECIES 5 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00900000143807 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B Canidae ANCESTRAL SPECIES 9 ENSGT00390000006124 ENSGT00940000158554 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00940000162750 ENSGT00530000063632.B Red fox MODERN SPECIES 302 ENSVVUG00000002740 ##22 ENSVVUG00000002750 ##22 ENSVVUG00000002784 ##22 RACK1 (ENSVVUG00000002788) TRIM41 (ENSVVUG00000002803) TRIM7 (ENSVVUG00000002810) ENSVVUG00000002817 ENSVVUG00000002822 BTNL9 (ENSVVUG00000002828) ENSVVUG00000002843 ZFP62 (ENSVVUG00000002852) SNRPG (ENSVVUG00000002858) MGAT1 (ENSVVUG00000002865) Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000157465 ENSGT00940000161005 ENSGT00940000158327 ENSGT00940000156413 ENSGT00950000182802.A.bb ENSGT00940000158978 ENSGT00940000159358 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.a ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.b.a.a.b ##22 ENSGT00950000186243 ENSGT00950000183007.a.b.g.a.b.b.b.a ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01050000245376.a.a ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00390000006350.m.a.c.b.a.a.p.a ENSGT00530000063632.B Dingo MODERN SPECIES 238 RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) GFPT2 (ENSCAFG00020002548) ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) FLT4 (ENSCAFG00020002415) ENSCAFG00020002411 ENSCAFG00020002403 ##22 ENSCAFG00020002399 ##22 ENSCAFG00020002398 ##22 ENSCAFG00020002314 ##22 ENSCAFG00020002301 ##22 ENSCAFG00020002291 ENSCAFG00020002248 ##22 ENSCAFG00020002229 ##22 TRIM52 (ENSCAFG00020002225) RACK1 (ENSCAFG00020002209) TRIM41 (ENSCAFG00020002200) TRIM7 (ENSCAFG00020002191) ENSCAFG00020002186 ENSCAFG00020002183 ENSCAFG00020002179 ENSCAFG00020002171 ENSCAFG00020002169 MGAT1 (ENSCAFG00020002161) Caniformia_b ANCESTRAL SPECIES ENSGT00950000183007.a.b.g.b.b ##22 Ursidae ANCESTRAL SPECIES 51 ENSGT00960000186612.A.j.a.a ENSGT00960000186612.A.j.b.b ENSGT00950000183007.a.b.g.a.b.b.a.a ##22 ENSGT00950000183007.a.b.g.b.a.a.a.a ##22 ENSGT00950000183007.a.b.g.a.a.d ##22 ENSGT00950000183007.a.b.g.a.b.b.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.b.a.c ##22 ENSGT00950000183007.a.b.g.b.a.a.a.b ##22 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01030000234553.b.b.d.c.a.c.a ENSGT00940000162327 Giant Panda MODERN SPECIES 13 ENSAMEG00000026585 ENSAMEG00000000972 ENSAMEG00000000974 ENSAMEG00000027505 ENSAMEG00000019809 ENSAMEG00000027968 ENSAMEG00000026034 ENSAMEG00000026408 ENSAMEG00000019860 ENSAMEG00000014070 ##22 ENSAMEG00000024882 ##22 ENSAMEG00000018886 ##22 ENSAMEG00000025265 ##22 ENSAMEG00000029945 ##22 ENSAMEG00000004482 ##22 ENSAMEG00000001281 ##22 ENSAMEG00000025627 ENSAMEG00000000003 ENSAMEG00000000004 TRIM41 (ENSAMEG00000000005) TRIM7 (ENSAMEG00000029192) ENSAMEG00000029392 BTNL9 (ENSAMEG00000015008) ENSAMEG00000015006 ENSAMEG00000020052 ENSAMEG00000015004 ENSAMEG00000019261 ZNF692 (ENSAMEG00000017607) ENSAMEG00000019253 ENSAMEG00000017600 ENSAMEG00000008420 Ursus ANCESTRAL SPECIES 149 ENSGT00950000183007.a.b.g.a.a.c ##22 ENSGT00950000183007.a.b.g.a.b.b.a.b ##22 ENSGT00950000183007.a.b.g.b.b ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154294.k.b ENSGT00940000154461 ENSGT00940000154294.k.a.b ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b.a ENSGT01090000259995.b.a.a.b.h ENSGT01090000259995.b.a.a.b.g ENSGT00940000160338 ENSGT00940000162750 ENSGT01030000234553.b.b.d.c.a.c.a ENSGT00940000162327 ENSGT00940000161175.e Polar bear MODERN SPECIES 495 ENSUMAG00000009719 ##22 ENSUMAG00000009716 ##22 ENSUMAG00000009713 ##22 ENSUMAG00000009703 TRIM52 (ENSUMAG00000009699) RACK1 (ENSUMAG00000009689) TRIM41 (ENSUMAG00000009686) TRIM7 (ENSUMAG00000009682) ENSUMAG00000009676 ENSUMAG00000009674 ENSUMAG00000009673 ENSUMAG00000009671 ENSUMAG00000009669 ENSUMAG00000009668 ENSUMAG00000009664 ZFP62 (ENSUMAG00000009655) ENSUMAG00000009652 PGBD2 (ENSUMAG00000009651) Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000017153.b ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Primates ANCESTRAL SPECIES 8 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000017153.b ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000017153.b ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a Lemuriformes ANCESTRAL SPECIES 21 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Lemuriformes_a ANCESTRAL SPECIES 13 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000159769.a.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Greater bamboo lemur MODERN SPECIES 50 CDX1 (ENSPSMG00000023900) SLC6A7 (ENSPSMG00000023895) ENSPSMG00000023853 ARSI (ENSPSMG00000023785) TCOF1 (ENSPSMG00000023681) CD74 (ENSPSMG00000023546) ENSPSMG00000023524 NDST1 (ENSPSMG00000023510) SYNPO (ENSPSMG00000023491) MYOZ3 (ENSPSMG00000023487) RBM22 (ENSPSMG00000023476) DCTN4 (ENSPSMG00000023450) ENSPSMG00000023396 SMIM3 (ENSPSMG00000023388) ENSPSMG00000023383 ENSPSMG00000023373 ##22 ZNF300 (ENSPSMG00000023364) ENSPSMG00000023356 GPX3 (ENSPSMG00000023344) TNIP1 (ENSPSMG00000023321) ANXA6 (ENSPSMG00000023176) CCDC69 (ENSPSMG00000022895) ENSPSMG00000022864 SLC36A3 (ENSPSMG00000022857) SLC36A2 (ENSPSMG00000022841) ENSPSMG00000022834 SLC36A1 (ENSPSMG00000022802) FAT2 (ENSPSMG00000022740) SPARC (ENSPSMG00000022710) ENSPSMG00000022692 ATOX1 (ENSPSMG00000022687) Bushbaby MODERN SPECIES 118 CDX1 (ENSOGAG00000025120) SLC6A7 (ENSOGAG00000004607) ENSOGAG00000024303 ENSOGAG00000004613 ARSI (ENSOGAG00000004618) TCOF1 (ENSOGAG00000004619) ENSOGAG00000031151 CD74 (ENSOGAG00000004628) ENSOGAG00000000721 NDST1 (ENSOGAG00000011074) SYNPO (ENSOGAG00000025667) MYOZ3 (ENSOGAG00000011085) RBM22 (ENSOGAG00000011086) DCTN4 (ENSOGAG00000011089) SMIM3 (ENSOGAG00000029557) ENSOGAG00000028713 ##22 ZNF300 (ENSOGAG00000031549) ENSOGAG00000033243 ENSOGAG00000026462 ENSOGAG00000000343 TNIP1 (ENSOGAG00000000344) ENSOGAG00000011321 ENSOGAG00000034321 CCDC69 (ENSOGAG00000011324) GM2A (ENSOGAG00000026021) SLC36A3 (ENSOGAG00000011328) SLC36A2 (ENSOGAG00000011330) SLC36A1 (ENSOGAG00000015651) FAT2 (ENSOGAG00000015653) SPARC (ENSOGAG00000001725) ATOX1 (ENSOGAG00000013217) Haplorrhini ANCESTRAL SPECIES 4 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 Simiiformes ANCESTRAL SPECIES 6 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00390000011365.a ENSGT00390000010047.a.b.a.b Catarrhini ANCESTRAL SPECIES 7 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00910000148764 ENSGT00390000010047.a.b.a.b Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517.k ENSGT00910000148764 ENSGT00390000010047.a.b.a.b ENSGT00940000159047 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517.k ENSGT00910000148764 ENSGT00390000010047.a.b.a.b ENSGT00940000159047 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00910000147883 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517.k ENSGT00910000148764 ENSGT00390000010047.a.b.a.b ENSGT00940000159047 Macaca ANCESTRAL SPECIES 7 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h.h.b ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517.k ENSGT00910000148764 ENSGT00940000162517.l ENSGT00390000011365.a Pig-tailed macaque MODERN SPECIES 383 CDX1 (ENSMNEG00000030411) SLC6A7 (ENSMNEG00000024157) CAMK2A (ENSMNEG00000044336) ARSI (ENSMNEG00000039468) TCOF1 (ENSMNEG00000037911) CD74 (ENSMNEG00000036530) RPS14 (ENSMNEG00000037025) NDST1 (ENSMNEG00000035129) SYNPO (ENSMNEG00000028990) MYOZ3 (ENSMNEG00000041808) RBM22 (ENSMNEG00000035500) DCTN4 (ENSMNEG00000033395) ENSMNEG00000035752 SMIM3 (ENSMNEG00000009006) ENSMNEG00000003762 IRGM (ENSMNEG00000035125) ##22 ZNF300 (ENSMNEG00000037153) GPX3 (ENSMNEG00000030683) TNIP1 (ENSMNEG00000022961) ANXA6 (ENSMNEG00000035257) CCDC69 (ENSMNEG00000044666) GM2A (ENSMNEG00000030396) SLC36A3 (ENSMNEG00000029091) SLC36A2 (ENSMNEG00000032236) SLC36A1 (ENSMNEG00000029317) FAT2 (ENSMNEG00000045400) SPARC (ENSMNEG00000014038) ATOX1 (ENSMNEG00000039738) G3BP1 (ENSMNEG00000021253) ENSMNEG00000003877 GLRA1 (ENSMNEG00000034655) Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b.c.b ENSGT00940000162517.k.b ENSGT00510000046787.e.b.c.a ENSGT00940000162517.l ENSGT00390000011365.a Cercopithecinae_d ANCESTRAL SPECIES 90 ENSGT00910000147883 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b.c.a ENSGT00940000162517.l ENSGT00390000011365.a ENSGT00390000010047.a.b.a.b ENSGT00940000159047 Drill MODERN SPECIES 921 ENSMLEG00000027551 ENSMLEG00000036186 SLC6A7 (ENSMLEG00000040929) CAMK2A (ENSMLEG00000040131) ARSI (ENSMLEG00000039581) TCOF1 (ENSMLEG00000035580) CD74 (ENSMLEG00000035018) RPS14 (ENSMLEG00000029392) NDST1 (ENSMLEG00000038733) SYNPO (ENSMLEG00000032778) ENSMLEG00000005968 RBM22 (ENSMLEG00000034825) DCTN4 (ENSMLEG00000043609) SMIM3 (ENSMLEG00000003176) ENSMLEG00000043390 IRGM (ENSMLEG00000016871) ##22 ZNF300 (ENSMLEG00000041975) GPX3 (ENSMLEG00000006710) TNIP1 (ENSMLEG00000026506) ANXA6 (ENSMLEG00000035615) CCDC69 (ENSMLEG00000032570) GM2A (ENSMLEG00000017264) SLC36A3 (ENSMLEG00000036664) SLC36A2 (ENSMLEG00000004879) SLC36A1 (ENSMLEG00000040481) FAT2 (ENSMLEG00000032800) SPARC (ENSMLEG00000029267) ENSMLEG00000029418 G3BP1 (ENSMLEG00000032036) ENSMLEG00000042346 GLRA1 (ENSMLEG00000038021) Sooty mangabey MODERN SPECIES 150 PDGFRB (ENSCATG00000044827) CDX1 (ENSCATG00000040987) SLC6A7 (ENSCATG00000034837) CAMK2A (ENSCATG00000035164) ARSI (ENSCATG00000035397) TCOF1 (ENSCATG00000032047) CD74 (ENSCATG00000041658) RPS14 (ENSCATG00000032281) NDST1 (ENSCATG00000030241) SYNPO (ENSCATG00000035567) MYOZ3 (ENSCATG00000033065) RBM22 (ENSCATG00000042133) DCTN4 (ENSCATG00000044915) SMIM3 (ENSCATG00000017533) ENSCATG00000041536 IRGM (ENSCATG00000041689) ##22 ZNF300 (ENSCATG00000006978) GPX3 (ENSCATG00000013573) TNIP1 (ENSCATG00000042774) ANXA6 (ENSCATG00000042117) CCDC69 (ENSCATG00000040897) GM2A (ENSCATG00000041023) SLC36A3 (ENSCATG00000034422) SLC36A2 (ENSCATG00000025179) SLC36A1 (ENSCATG00000034672) FAT2 (ENSCATG00000044962) SPARC (ENSCATG00000031975) ENSCATG00000041465 G3BP1 (ENSCATG00000018373) GLRA1 (ENSCATG00000037389) ENSCATG00000034503 Rhinopithecus ANCESTRAL SPECIES 53 ENSGT00910000147883 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517.l ENSGT00390000011365.a ENSGT00390000010047.a.b.a.b ENSGT00940000159047 Black snub-nosed monkey MODERN SPECIES 531 ENSRBIG00000029648 CDX1 (ENSRBIG00000026089) SLC6A7 (ENSRBIG00000033408) CAMK2A (ENSRBIG00000040779) ARSI (ENSRBIG00000031647) TCOF1 (ENSRBIG00000032993) CD74 (ENSRBIG00000042547) ENSRBIG00000039331 NDST1 (ENSRBIG00000028067) SYNPO (ENSRBIG00000016051) MYOZ3 (ENSRBIG00000010689) RBM22 (ENSRBIG00000041683) ENSRBIG00000031732 SMIM3 (ENSRBIG00000016271) ENSRBIG00000012227 IRGM (ENSRBIG00000042496) ##22 ZNF300 (ENSRBIG00000044234) GPX3 (ENSRBIG00000044997) TNIP1 (ENSRBIG00000027176) ANXA6 (ENSRBIG00000041548) CCDC69 (ENSRBIG00000026946) GM2A (ENSRBIG00000044207) SLC36A3 (ENSRBIG00000030720) SLC36A2 (ENSRBIG00000044519) SLC36A1 (ENSRBIG00000039053) FAT2 (ENSRBIG00000038121) SPARC (ENSRBIG00000043589) ATOX1 (ENSRBIG00000033555) G3BP1 (ENSRBIG00000042268) ENSRBIG00000033185 GLRA1 (ENSRBIG00000032053) Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00910000148764 ENSGT00390000010047.a.b.a.b Hominidae ANCESTRAL SPECIES 7 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00940000163712 ENSGT00910000148764 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00940000163712 ENSGT00910000148764 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00940000163712 ENSGT00910000148764 Pan ANCESTRAL SPECIES 10 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00910000147707 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517 ENSGT00940000163712 ENSGT00910000148764 ENSGT00390000011365.a Bonobo MODERN SPECIES 18 CDX1 (ENSPPAG00000034240) SLC6A7 (ENSPPAG00000006132) CAMK2A (ENSPPAG00000042225) ARSI (ENSPPAG00000039302) TCOF1 (ENSPPAG00000038092) CD74 (ENSPPAG00000037472) RPS14 (ENSPPAG00000027035) NDST1 (ENSPPAG00000033706) ENSPPAG00000028913 MYOZ3 (ENSPPAG00000031802) RBM22 (ENSPPAG00000034432) DCTN4 (ENSPPAG00000037460) ENSPPAG00000020339 SMIM3 (ENSPPAG00000019792) ENSPPAG00000013008 IRGM (ENSPPAG00000030526) ##22 ZNF300 (ENSPPAG00000031459) ENSPPAG00000032371 TNIP1 (ENSPPAG00000025830) ANXA6 (ENSPPAG00000031897) GM2A (ENSPPAG00000037388) SLC36A3 (ENSPPAG00000038247) SLC36A2 (ENSPPAG00000030952) SLC36A1 (ENSPPAG00000035415) FAT2 (ENSPPAG00000035661) SPARC (ENSPPAG00000040370) ATOX1 (ENSPPAG00000042315) ENSPPAG00000034828 G3BP1 (ENSPPAG00000027573) GLRA1 (ENSPPAG00000042329) NMUR2 (ENSPPAG00000026509) Chimpanzee MODERN SPECIES 18 CDX1 (ENSPTRG00000017411) SLC6A7 (ENSPTRG00000017413) CAMK2A (ENSPTRG00000017414) ARSI (ENSPTRG00000017415) TCOF1 (ENSPTRG00000017416) CD74 (ENSPTRG00000017417) RPS14 (ENSPTRG00000017418) NDST1 (ENSPTRG00000017419) SYNPO (ENSPTRG00000017420) MYOZ3 (ENSPTRG00000017421) RBM22 (ENSPTRG00000017423) DCTN4 (ENSPTRG00000017424) ENSPTRG00000045327 SMIM3 (ENSPTRG00000042157) ENSPTRG00000052500 IRGM (ENSPTRG00000040838) ##22 ZNF300 (ENSPTRG00000017426) GPX3 (ENSPTRG00000017427) TNIP1 (ENSPTRG00000017428) ANXA6 (ENSPTRG00000047021) GM2A (ENSPTRG00000017431) SLC36A3 (ENSPTRG00000017432) SLC36A2 (ENSPTRG00000017433) SLC36A1 (ENSPTRG00000017434) FAT2 (ENSPTRG00000017435) SPARC (ENSPTRG00000017436) ENSPTRG00000043099 ATOX1 (ENSPTRG00000017437) ENSPTRG00000046428 ENSPTRG00000043195 G3BP1 (ENSPTRG00000017438) Human MODERN SPECIES 17 CSF1R (ENSG00000182578) PDGFRB (ENSG00000113721) CDX1 (ENSG00000113722) SLC6A7 (ENSG00000011083) CAMK2A (ENSG00000070808) ARSI (ENSG00000183876) TCOF1 (ENSG00000070814) CD74 (ENSG00000019582) RPS14 (ENSG00000164587) NDST1 (ENSG00000070614) SYNPO (ENSG00000171992) MYOZ3 (ENSG00000164591) RBM22 (ENSG00000086589) DCTN4 (ENSG00000132912) SMIM3 (ENSG00000256235) IRGM (ENSG00000237693) ##22 ZNF300 (ENSG00000145908) GPX3 (ENSG00000211445) TNIP1 (ENSG00000145901) ANXA6 (ENSG00000197043) CCDC69 (ENSG00000198624) GM2A (ENSG00000196743) SLC36A3 (ENSG00000186334) SLC36A2 (ENSG00000186335) SLC36A1 (ENSG00000123643) FAT2 (ENSG00000086570) SPARC (ENSG00000113140) ATOX1 (ENSG00000177556) G3BP1 (ENSG00000145907) GLRA1 (ENSG00000145888) NMUR2 (ENSG00000132911) Gorilla MODERN SPECIES 18 ENSGGOG00000000106 SLC6A7 (ENSGGOG00000000107) CAMK2A (ENSGGOG00000000108) ARSI (ENSGGOG00000000111) TCOF1 (ENSGGOG00000011690) CD74 (ENSGGOG00000011709) RPS14 (ENSGGOG00000024593) NDST1 (ENSGGOG00000013713) ENSGGOG00000016337 MYOZ3 (ENSGGOG00000037558) RBM22 (ENSGGOG00000012947) DCTN4 (ENSGGOG00000009813) ENSGGOG00000043071 SMIM3 (ENSGGOG00000041128) ENSGGOG00000039248 IRGM (ENSGGOG00000022924) ##22 ZNF300 (ENSGGOG00000008304) GPX3 (ENSGGOG00000000889) TNIP1 (ENSGGOG00000000891) ANXA6 (ENSGGOG00000005109) CCDC69 (ENSGGOG00000006494) GM2A (ENSGGOG00000015302) SLC36A3 (ENSGGOG00000004915) SLC36A2 (ENSGGOG00000038419) SLC36A1 (ENSGGOG00000006356) FAT2 (ENSGGOG00000006362) SPARC (ENSGGOG00000016149) ATOX1 (ENSGGOG00000008760) ENSGGOG00000026958 ENSGGOG00000038918 G3BP1 (ENSGGOG00000022952) Platyrrhini ANCESTRAL SPECIES 7 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.g.a.a.b ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00860000135878 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00910000147868 ENSGT00940000162517.j ENSGT00390000011365.a ENSGT00390000010047.a.b.a.b Mas night monkey MODERN SPECIES 966 CDX1 (ENSANAG00000022954) SLC6A7 (ENSANAG00000021354) CAMK2A (ENSANAG00000021986) ARSI (ENSANAG00000035477) TCOF1 (ENSANAG00000027583) CD74 (ENSANAG00000024731) ENSANAG00000024272 ENSANAG00000023796 NDST1 (ENSANAG00000029326) SYNPO (ENSANAG00000036473) MYOZ3 (ENSANAG00000037631) ENSANAG00000033743 DCTN4 (ENSANAG00000024758) SMIM3 (ENSANAG00000013127) ENSANAG00000031469 IRGM (ENSANAG00000029655) ##22 ENSANAG00000029251 ENSANAG00000030805 ENSANAG00000028510 ZNF300 (ENSANAG00000029643) GPX3 (ENSANAG00000033799) TNIP1 (ENSANAG00000037058) ANXA6 (ENSANAG00000033032) CCDC69 (ENSANAG00000033186) GM2A (ENSANAG00000034354) SLC36A3 (ENSANAG00000032963) SLC36A2 (ENSANAG00000021675) SLC36A1 (ENSANAG00000032041) FAT2 (ENSANAG00000036708) ENSANAG00000012093 SPARC (ENSANAG00000021448) Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d Glires ANCESTRAL SPECIES 7 ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00390000009443 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 ENSGT00940000160823 ENSGT00940000155150.b.b ENSGT00940000157656.a ENSGT00730000111382 ENSGT00390000008961 ENSGT00390000000703.h ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a ENSGT00390000002792 ENSGT00390000006954 ENSGT00950000183007.a.b.g.a.b.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162678 ENSGT00940000161754 ENSGT00510000046908.a.a.a ENSGT00940000158770 ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000162406 ENSGT00940000162044 ENSGT00940000156583 ENSGT00940000158507 ENSGT00510000046787.e.b ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d Rabbit MODERN SPECIES 14 CSF1R (ENSOCUG00000021056) PDGFRB (ENSOCUG00000001725) CDX1 (ENSOCUG00000012479) SLC6A7 (ENSOCUG00000006404) CAMK2A (ENSOCUG00000017865) ARSI (ENSOCUG00000025005) TCOF1 (ENSOCUG00000003848) CD74 (ENSOCUG00000003863) ENSOCUG00000011509 NDST1 (ENSOCUG00000011515) SYNPO (ENSOCUG00000009270) MYOZ3 (ENSOCUG00000013346) RBM22 (ENSOCUG00000011532) DCTN4 (ENSOCUG00000013510) ENSOCUG00000024432 ##22 ENSOCUG00000028024 ##22 ZNF300 (ENSOCUG00000037473) ENSOCUG00000037867 ANXA6 (ENSOCUG00000005379) ENSOCUG00000015837 SLC36A3 (ENSOCUG00000015841) SLC36A2 (ENSOCUG00000015850) SLC36A1 (ENSOCUG00000012093) FAT2 (ENSOCUG00000012103) ATOX1 (ENSOCUG00000038763) SPARC (ENSOCUG00000012120) ENSOCUG00000022143 GLRA1 (ENSOCUG00000002648) ENSOCUG00000029929 NMUR2 (ENSOCUG00000013507) ENSOCUG00000024649 Rodentia ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162327 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.a ENSGT01090000260018.A.a.a.b.b ENSGT01090000259995.b.a.a.a.a.a.a ENSGT01090000259995.b.a.a.a.b ENSGT01090000259995.b.b.a.a.a Rodentia_B ANCESTRAL SPECIES 77 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 Myomorpha ANCESTRAL SPECIES 82 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b ##22 Muroidea DUPLICATION Muroidea ANCESTRAL SPECIES 10 ENSGT00940000159358 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345 ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000159087 ENSGT00940000159624 ENSGT00940000161042 Muroidea_A ANCESTRAL SPECIES 1 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000159087 Cricetidae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000159087 ENSGT00940000159624 ENSGT00940000161042 Cricetinae ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00520000062120 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00390000013517 ENSGT00940000159087 Chinese hamster chok1gshd MODERN SPECIES 229 Or2y16 (ENSCGRG00001011387) Or2y1d (ENSCGRG00001007708) Or2y17 (ENSCGRG00001009532) Or2y1e (ENSCGRG00001007503) ENSCGRG00001007853 Mgat1 (ENSCGRG00001009916) Btnl9 (ENSCGRG00001004215) Or2o1 (ENSCGRG00001008440) Or2t26 (ENSCGRG00001007197) Or2v1 (ENSCGRG00001006442) Or2v2 (ENSCGRG00001005579) Ifi47 (ENSCGRG00001001682) ##22 ENSCGRG00001005773 ##22 ENSCGRG00001006408 ##22 ENSCGRG00001022428 ##22 Irgm1 (ENSCGRG00001012432) ##22 Trim7 (ENSCGRG00001021678) Trim41 (ENSCGRG00001016698) Rack1 (ENSCGRG00001015886) ENSCGRG00001011288 ENSCGRG00001023359 Sgcd (ENSCGRG00001013442) Timd4 (ENSCGRG00001009908) Havcr1 (ENSCGRG00001022176) ENSCGRG00001019450 Havcr2 (ENSCGRG00001019621) Med7 (ENSCGRG00001003660) Garin3 (ENSCGRG00001015508) Itk (ENSCGRG00001015051) Fndc9 (ENSCGRG00001007038) Cyfip2 (ENSCGRG00001014640) Cricetidae_B ANCESTRAL SPECIES ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.l ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00390000013517 ENSGT00500000044831.a.a.b ENSGT00940000159087 ENSGT00940000159624 ENSGT00940000161042 ENSGT00390000011705 ENSGT00390000012944 Prairie vole MODERN SPECIES 15 Scgb3a1 (ENSMOCG00000018902) Flt4 (ENSMOCG00000016968) ENSMOCG00000002436 ENSMOCG00000002339 Or2y1e (ENSMOCG00000002007) ENSMOCG00000001892 ENSMOCG00000002296 Mgat1 (ENSMOCG00000018641) Zfp62 (ENSMOCG00000020277) Btnl9 (ENSMOCG00000022810) Or2t26 (ENSMOCG00000003090) Or2v1 (ENSMOCG00000003060) ENSMOCG00000012574 ##22 ENSMOCG00000016393 ##22 ENSMOCG00000008024 ##22 Irgm1 (ENSMOCG00000009734) ##22 Trim7 (ENSMOCG00000012310) Trim41 (ENSMOCG00000022282) ENSMOCG00000019569 ENSMOCG00000002119 Sgcd (ENSMOCG00000022475) ENSMOCG00000003726 Znhit3 (ENSMOCG00000021001) Myo19 (ENSMOCG00000022671) Pigw (ENSMOCG00000007146) Ggnbp2 (ENSMOCG00000014766) Dhrs11 (ENSMOCG00000021713) Ercc4 (ENSMOCG00000021533) Mrtfb (ENSMOCG00000022536) Parn (ENSMOCG00000022211) Bfar (ENSMOCG00000015581) Northern American deer mouse MODERN SPECIES 21 ENSPEMG00000029606 ENSPEMG00000031159 ENSPEMG00000028956 Mgat1 (ENSPEMG00000005968) Zfp62 (ENSPEMG00000012272) Btnl9 (ENSPEMG00000015855) Or2o1 (ENSPEMG00000008066) Or2t26 (ENSPEMG00000007090) Or2v1 (ENSPEMG00000025959) Or2v2 (ENSPEMG00000025836) Ifi47 (ENSPEMG00000017464) ##22 ENSPEMG00000029540 ENSPEMG00000018053 ##22 ENSPEMG00000015679 ##22 ENSPEMG00000028500 ##22 Irgm1 (ENSPEMG00000018645) ##22 Trim7 (ENSPEMG00000012640) Trim41 (ENSPEMG00000017879) Rack1 (ENSPEMG00000011124) ENSPEMG00000027931 Sgcd (ENSPEMG00000011649) Timd4 (ENSPEMG00000012210) ENSPEMG00000030816 ENSPEMG00000024940 ENSPEMG00000025066 ENSPEMG00000028909 ENSPEMG00000019712 ENSPEMG00000029530 Havcr2 (ENSPEMG00000019286) Med7 (ENSPEMG00000019778) Garin3 (ENSPEMG00000007819) Murinae ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Mus ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Mus_A ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Mus_B ANCESTRAL SPECIES 2 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.b.a.g ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Mouse MODERN SPECIES 2 Mgat1 (ENSMUSG00000020346) Zfp62 (ENSMUSG00000046311) Btnl9 (ENSMUSG00000040283) Or2o1 (ENSMUSG00000048378) Or2t26 (ENSMUSG00000050763) Or2v2 (ENSMUSG00000047511) Ifi47 (ENSMUSG00000078920) ##22 Tgtp2 (ENSMUSG00000078921) ##22 9930111J21Rik2 (ENSMUSG00000069892) ##22 Tgtp1 (ENSMUSG00000078922) ##22 Or2v1 (ENSMUSG00000040328) 9930111J21Rik1 (ENSMUSG00000069893) ##22 Psme2b (ENSMUSG00000078153) Gm12185 (ENSMUSG00000048852) ##22 Gm5431 (ENSMUSG00000058163) ##22 Irgm1 (ENSMUSG00000046879) ##22 Trim7 (ENSMUSG00000040350) Gm12184 (ENSMUSG00000078154) Trim41 (ENSMUSG00000040365) Rack1 (ENSMUSG00000020372) Sgcd (ENSMUSG00000020354) Timd4 (ENSMUSG00000055546) Havcr1 (ENSMUSG00000040405) Timd2 (ENSMUSG00000040413) Dppa1 (ENSMUSG00000064010) BC053393 (ENSMUSG00000046974) Gm12169 (ENSMUSG00000078924) Havcr2 (ENSMUSG00000020399) Med7 (ENSMUSG00000020397) Garin3 (ENSMUSG00000020401) Itk (ENSMUSG00000020395) Mus_C ANCESTRAL SPECIES 3 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.a ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.b ##22 ENSGT00950000183007.a.b.g.a.b.b.j.b.a.a.a ##22 ENSGT00950000183007.a.b.g.b.c ##22 ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT00940000158509 ENSGT00940000161609 ENSGT00940000159345.k.a ENSGT00940000159345.k.b ENSGT00520000062120 ENSGT00940000159345.l.d ENSGT00940000159345.l.c ENSGT00940000154444.A ENSGT00940000154444.B ENSGT00940000162063 ENSGT00940000158850 ENSGT00500000044831.a.a.b Steppe mouse MODERN SPECIES 26 ENSMSIG00000000072 ##22 Gm5431 (ENSMSIG00000000138) ##22 Irgm1 (ENSMSIG00000000152) ##22 Trim7 (ENSMSIG00000000211) Trim41 (ENSMSIG00000000264) Rack1 (ENSMSIG00000000343) ENSMSIG00000000438 ENSMSIG00000000464 ENSMSIG00000000474 Sgcd (ENSMSIG00000000535) ENSMSIG00000000620 Timd4 (ENSMSIG00000000632) Havcr1 (ENSMSIG00000000666) Timd2 (ENSMSIG00000000775) Dppa1 (ENSMSIG00000000898) BC053393 (ENSMSIG00000000932) Gm12169 (ENSMSIG00000000970) spretus MODERN SPECIES 2 Or2y1e (MGP_SPRETEiJ_G0017113) Mgat1 (MGP_SPRETEiJ_G0017112) Zfp62 (MGP_SPRETEiJ_G0017111) Btnl9 (MGP_SPRETEiJ_G0017110) Or2o1 (MGP_SPRETEiJ_G0017109) Or2t26 (MGP_SPRETEiJ_G0017108) Or2v2 (MGP_SPRETEiJ_G0017107) MGP_SPRETEiJ_G0017106 Ifi47 (MGP_SPRETEiJ_G0017105) ##22 MGP_SPRETEiJ_G0017103 ##22 Or2v1 (MGP_SPRETEiJ_G0017102) MGP_SPRETEiJ_G0017101 ##22 MGP_SPRETEiJ_G0017100 ##22 MGP_SPRETEiJ_G0017099 ##22 MGP_SPRETEiJ_G0017098 ##22 Irgm1 (MGP_SPRETEiJ_G0017097) ##22 Trim7 (MGP_SPRETEiJ_G0017096) Trim41 (MGP_SPRETEiJ_G0017095) Rack1 (MGP_SPRETEiJ_G0017094) Sgcd (MGP_SPRETEiJ_G0017093) MGP_SPRETEiJ_G0017092 Havcr1 (MGP_SPRETEiJ_G0017091) Timd2 (MGP_SPRETEiJ_G0017090) Dppa1 (MGP_SPRETEiJ_G0017089) BC053393 (MGP_SPRETEiJ_G0017088) Gm12169 (MGP_SPRETEiJ_G0017087) Havcr2 (MGP_SPRETEiJ_G0017086) Med7 (MGP_SPRETEiJ_G0017085) Garin3 (MGP_SPRETEiJ_G0017084) Itk (MGP_SPRETEiJ_G0017083) Fndc9 (MGP_SPRETEiJ_G0017082) Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0016272 Or2y15 (MGP_CAROLIEiJ_G0016271) Or2y16 (MGP_CAROLIEiJ_G0016270) Or2y1d (MGP_CAROLIEiJ_G0016269) Or2y1e (MGP_CAROLIEiJ_G0016268) Mgat1 (MGP_CAROLIEiJ_G0016267) Zfp62 (MGP_CAROLIEiJ_G0016266) Btnl9 (MGP_CAROLIEiJ_G0016265) Or2o1 (MGP_CAROLIEiJ_G0016264) Or2t26 (MGP_CAROLIEiJ_G0016263) Or2v1 (MGP_CAROLIEiJ_G0016262) Ifi47 (MGP_CAROLIEiJ_G0016261) ##22 MGP_CAROLIEiJ_G0016260 ##22 MGP_CAROLIEiJ_G0016258 ##22 MGP_CAROLIEiJ_G0016257 ##22 Irgm1 (MGP_CAROLIEiJ_G0016256) ##22 Trim7 (MGP_CAROLIEiJ_G0016255) Trim41 (MGP_CAROLIEiJ_G0016254) Rack1 (MGP_CAROLIEiJ_G0016253) Sgcd (MGP_CAROLIEiJ_G0016252) Timd4 (MGP_CAROLIEiJ_G0016251) Havcr1 (MGP_CAROLIEiJ_G0016250) MGP_CAROLIEiJ_G0016249 Dppa1 (MGP_CAROLIEiJ_G0016248) BC053393 (MGP_CAROLIEiJ_G0016247) Gm12169 (MGP_CAROLIEiJ_G0016246) Havcr2 (MGP_CAROLIEiJ_G0016245) Med7 (MGP_CAROLIEiJ_G0016244) Garin3 (MGP_CAROLIEiJ_G0016243) Itk (MGP_CAROLIEiJ_G0016242) Fndc9 (MGP_CAROLIEiJ_G0016241) Shrew mouse MODERN SPECIES 5 Or2y16 (MGP_PahariEiJ_G0017407) Or2y1d (MGP_PahariEiJ_G0017406) MGP_PahariEiJ_G0017405 ##22 MGP_PahariEiJ_G0017404 ##22 Or2y1e (MGP_PahariEiJ_G0017403) MGP_PahariEiJ_G0017402 Mgat1 (MGP_PahariEiJ_G0017401) Zfp62 (MGP_PahariEiJ_G0017400) MGP_PahariEiJ_G0017399 Or2o1 (MGP_PahariEiJ_G0017398) Or2t26 (MGP_PahariEiJ_G0017397) MGP_PahariEiJ_G0017396 MGP_PahariEiJ_G0017395 Ifi47 (MGP_PahariEiJ_G0017394) ##22 Or2v1 (MGP_PahariEiJ_G0017393) Irgm1 (MGP_PahariEiJ_G0017392) ##22 Trim7 (MGP_PahariEiJ_G0017391) Trim41 (MGP_PahariEiJ_G0017390) Rack1 (MGP_PahariEiJ_G0017389) Sgcd (MGP_PahariEiJ_G0017388) Timd4 (MGP_PahariEiJ_G0017387) Havcr1 (MGP_PahariEiJ_G0017386) MGP_PahariEiJ_G0017385 MGP_PahariEiJ_G0017384 BC053393 (MGP_PahariEiJ_G0017383) Gm12169 (MGP_PahariEiJ_G0017382) Havcr2 (MGP_PahariEiJ_G0017381) Med7 (MGP_PahariEiJ_G0017380) Garin3 (MGP_PahariEiJ_G0017379) Itk (MGP_PahariEiJ_G0017378) Fndc9 (MGP_PahariEiJ_G0017377) Rat MODERN SPECIES 1 Or2y1h (ENSRNOG00000070227) Or2y1g (ENSRNOG00000065390) Mgat1 (ENSRNOG00000068826) Zfp62 (ENSRNOG00000051756) Btnl9 (ENSRNOG00000046377) LOC684471 (ENSRNOG00000068423) Or2t26 (ENSRNOG00000048210) Or2v1 (ENSRNOG00000064581) Or2v2b (ENSRNOG00000064665) AC103024.1 (ENSRNOG00000031313) Or2v2 (ENSRNOG00000069499) Fam98b-ps1 (ENSRNOG00000069394) Or2v2c (ENSRNOG00000069777) Ifi47 (ENSRNOG00000002470) ##22 RGD1559575 (ENSRNOG00000032396) ##22 Irgm (ENSRNOG00000031138) ##22 Trim7 (ENSRNOG00000002469) Trim41 (ENSRNOG00000002388) Rack1 (ENSRNOG00000052620) Rpl30-ps1 (ENSRNOG00000051163) ENSRNOG00000063521 ENSRNOG00000067540 Sgcd (ENSRNOG00000002372) Timd4 (ENSRNOG00000038894) Havcr1 (ENSRNOG00000007243) ENSRNOG00000067141 Timd2 (ENSRNOG00000021345) Dppa1 (ENSRNOG00000043293) LOC689968 (ENSRNOG00000042265) LOC100359777 (ENSRNOG00000043422) Havcr2 (ENSRNOG00000031443) Upper Galilee mountains blind mole rat MODERN SPECIES 1306 ENSNGAG00000013991 Or2y1d (ENSNGAG00000013420) Or2y1e (ENSNGAG00000013882) ENSNGAG00000013552 Mgat1 (ENSNGAG00000021645) Btnl9 (ENSNGAG00000023753) Or2t26 (ENSNGAG00000014682) Or2v1 (ENSNGAG00000013833) ENSNGAG00000022536 ENSNGAG00000024187 Ifi47 (ENSNGAG00000023999) ##22 ENSNGAG00000021197 ##22 ENSNGAG00000021829 ##22 Irgm1 (ENSNGAG00000013043) ##22 Trim7 (ENSNGAG00000023925) Trim41 (ENSNGAG00000023272) Rack1 (ENSNGAG00000003406) Sgcd (ENSNGAG00000022742) Timd4 (ENSNGAG00000023712) Muroidea ANCESTRAL SPECIES 146 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d ##22 Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a Cricetidae ANCESTRAL SPECIES ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260018.A.a.a.b.b.l ENSGT01090000260044.D.b.a.a Cricetinae ANCESTRAL SPECIES ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001021201 Nmur2 (ENSCGRG00001022445) Gria1 (ENSCGRG00001010996) ENSCGRG00001021245 Fam114a2 (ENSCGRG00001019860) Mfap3 (ENSCGRG00001023022) Galnt10 (ENSCGRG00001024161) Sap30l (ENSCGRG00001023382) Hand1 (ENSCGRG00001013396) Larp1 (ENSCGRG00001016913) Gm12248 (ENSCGRG00001013725) Cnot8 (ENSCGRG00001014687) Gemin5 (ENSCGRG00001019095) Mrpl22 (ENSCGRG00001019966) ENSCGRG00001011027 ##22 Igtp (ENSCGRG00001015722) ##22 Irgm2 (ENSCGRG00001007676) ##22 4930438A08Rik (ENSCGRG00001018400) Zfp692 (ENSCGRG00001021445) Zfp672 (ENSCGRG00001004468) ENSCGRG00001011084 Lypd8 (ENSCGRG00001012127) ENSCGRG00001024373 Lypd9 (ENSCGRG00001001712) Or2z2 (ENSCGRG00001005918) ENSCGRG00001005085 Or2av9 (ENSCGRG00001006696) ENSCGRG00001009578 ENSCGRG00001009157 Or2ab1 (ENSCGRG00001013768) Lypd8l (ENSCGRG00001014617) Golden Hamster MODERN SPECIES 627 G3bp1 (ENSMAUG00000008655) Glra1 (ENSMAUG00000001329) ENSMAUG00000022058 Nmur2 (ENSMAUG00000001459) Gria1 (ENSMAUG00000022238) Fam114a2 (ENSMAUG00000003829) Mfap3 (ENSMAUG00000022064) Galnt10 (ENSMAUG00000022260) Sap30l (ENSMAUG00000001548) Hand1 (ENSMAUG00000022272) Larp1 (ENSMAUG00000001385) Gm12248 (ENSMAUG00000021997) ENSMAUG00000022252 Gemin5 (ENSMAUG00000005361) Mrpl22 (ENSMAUG00000021980) Igtp (ENSMAUG00000010911) ##22 ENSMAUG00000021919 ##22 4930438A08Rik (ENSMAUG00000022004) Zfp692 (ENSMAUG00000021817) Zfp672 (ENSMAUG00000009945) Sh3bp5l (ENSMAUG00000009441) Lypd8 (ENSMAUG00000021714) Lypd9 (ENSMAUG00000021917) Or2z2 (ENSMAUG00000010493) ENSMAUG00000010479 Or2av9 (ENSMAUG00000020712) ENSMAUG00000020684 Trim58 (ENSMAUG00000020919) ENSMAUG00000013852 ENSMAUG00000010641 Fam183b (ENSMAUG00000021857) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000162517 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000260018.A.a.a.b.b.l ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a Prairie vole MODERN SPECIES 15 Atox1 (ENSMOCG00000012051) G3bp1 (ENSMOCG00000005709) Glra1 (ENSMOCG00000022733) Nmur2 (ENSMOCG00000020916) Gria1 (ENSMOCG00000022383) Fam114a2 (ENSMOCG00000003408) Mfap3 (ENSMOCG00000022737) Galnt10 (ENSMOCG00000022339) Sap30l (ENSMOCG00000005889) Hand1 (ENSMOCG00000012912) Larp1 (ENSMOCG00000008920) Gm12248 (ENSMOCG00000018783) ENSMOCG00000002156 Gemin5 (ENSMOCG00000018131) Mrpl22 (ENSMOCG00000021016) ENSMOCG00000014171 ##22 Irgm2 (ENSMOCG00000012064) ##22 4930438A08Rik (ENSMOCG00000019006) Zfp692 (ENSMOCG00000016928) Zfp672 (ENSMOCG00000014653) Sh3bp5l (ENSMOCG00000019283) ENSMOCG00000015542 1810065E05Rik (ENSMOCG00000021034) Or2z2 (ENSMOCG00000002305) Or2av9 (ENSMOCG00000021724) ENSMOCG00000015269 Lypd8l (ENSMOCG00000022238) Trim58 (ENSMOCG00000019086) ENSMOCG00000002169 ENSMOCG00000011805 Fam183b (ENSMOCG00000013813) Murinae ANCESTRAL SPECIES 7 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a Mus ANCESTRAL SPECIES 2 ENSGT00390000011365.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000011365.a.sb.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Mus_B ANCESTRAL SPECIES 2 ENSGT00390000011365.a.sb.a ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Mouse MODERN SPECIES 2 Atox1 (ENSMUSG00000018585) G3bp1 (ENSMUSG00000018583) Glra1 (ENSMUSG00000000263) Nmur2 (ENSMUSG00000037393) Gria1 (ENSMUSG00000020524) Fam114a2 (ENSMUSG00000020523) Mfap3 (ENSMUSG00000020522) Galnt10 (ENSMUSG00000020520) Sap30l (ENSMUSG00000020519) Hand1 (ENSMUSG00000037335) Larp1 (ENSMUSG00000037331) Gm12248 (ENSMUSG00000086962) Cnot8 (ENSMUSG00000020515) Gemin5 (ENSMUSG00000037275) Mrpl22 (ENSMUSG00000020514) Igtp (ENSMUSG00000078853) ##22 Irgm2 (ENSMUSG00000069874) ##22 4930438A08Rik (ENSMUSG00000069873) Zfp692 (ENSMUSG00000037243) Zfp672 (ENSMUSG00000049755) Sh3bp5l (ENSMUSG00000013646) Lypd8 (ENSMUSG00000013643) 1810065E05Rik (ENSMUSG00000013653) Gm12253 (ENSMUSG00000058287) Lypd9 (ENSMUSG00000052642) Or2z2 (ENSMUSG00000043314) Or2av9 (ENSMUSG00000050813) Or2t49 (ENSMUSG00000058807) Or2t48 (ENSMUSG00000050818) Or2t29 (ENSMUSG00000064252) Or2t47 (ENSMUSG00000057654) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.m ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b spretus MODERN SPECIES 2 Sparc (MGP_SPRETEiJ_G0017214) Atox1 (MGP_SPRETEiJ_G0017215) G3bp1 (MGP_SPRETEiJ_G0017216) Glra1 (MGP_SPRETEiJ_G0017217) Nmur2 (MGP_SPRETEiJ_G0017218) Gria1 (MGP_SPRETEiJ_G0017219) Fam114a2 (MGP_SPRETEiJ_G0017220) Mfap3 (MGP_SPRETEiJ_G0017221) Galnt10 (MGP_SPRETEiJ_G0017222) Sap30l (MGP_SPRETEiJ_G0017223) Hand1 (MGP_SPRETEiJ_G0017224) Larp1 (MGP_SPRETEiJ_G0017225) Cnot8 (MGP_SPRETEiJ_G0017226) Gemin5 (MGP_SPRETEiJ_G0017227) Mrpl22 (MGP_SPRETEiJ_G0017228) Igtp (MGP_SPRETEiJ_G0017229) ##22 Irgm2 (MGP_SPRETEiJ_G0017230) ##22 MGP_SPRETEiJ_G0017231 MGP_SPRETEiJ_G0017232 Zfp672 (MGP_SPRETEiJ_G0017233) Sh3bp5l (MGP_SPRETEiJ_G0017234) Lypd8 (MGP_SPRETEiJ_G0017235) 1810065E05Rik (MGP_SPRETEiJ_G0017236) MGP_SPRETEiJ_G0017237 Lypd9 (MGP_SPRETEiJ_G0017238) Or2z2 (MGP_SPRETEiJ_G0017239) MGP_SPRETEiJ_G0017240 MGP_SPRETEiJ_G0017241 MGP_SPRETEiJ_G0017242 MGP_SPRETEiJ_G0017243 Or2ab1 (MGP_SPRETEiJ_G0017244) Muroidea_A ANCESTRAL SPECIES 1 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b Cricetidae ANCESTRAL SPECIES ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260018.A.a.a.b.b.l ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a Cricetinae ANCESTRAL SPECIES ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b.k.b.a ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01100000263486.a.b.a.b.b.a.a Chinese hamster chok1gshd MODERN SPECIES 229 Nmur2 (ENSCGRG00001022445) Gria1 (ENSCGRG00001010996) ENSCGRG00001021245 Fam114a2 (ENSCGRG00001019860) Mfap3 (ENSCGRG00001023022) Galnt10 (ENSCGRG00001024161) Sap30l (ENSCGRG00001023382) Hand1 (ENSCGRG00001013396) Larp1 (ENSCGRG00001016913) Gm12248 (ENSCGRG00001013725) Cnot8 (ENSCGRG00001014687) Gemin5 (ENSCGRG00001019095) Mrpl22 (ENSCGRG00001019966) ENSCGRG00001011027 ##22 Igtp (ENSCGRG00001015722) ##22 Irgm2 (ENSCGRG00001007676) ##22 4930438A08Rik (ENSCGRG00001018400) Zfp692 (ENSCGRG00001021445) Zfp672 (ENSCGRG00001004468) ENSCGRG00001011084 Lypd8 (ENSCGRG00001012127) ENSCGRG00001024373 Lypd9 (ENSCGRG00001001712) Or2z2 (ENSCGRG00001005918) ENSCGRG00001005085 Or2av9 (ENSCGRG00001006696) ENSCGRG00001009578 ENSCGRG00001009157 Or2ab1 (ENSCGRG00001013768) Lypd8l (ENSCGRG00001014617) Or11l3 (ENSCGRG00001007262) Golden Hamster MODERN SPECIES 627 Glra1 (ENSMAUG00000001329) ENSMAUG00000022058 Nmur2 (ENSMAUG00000001459) Gria1 (ENSMAUG00000022238) Fam114a2 (ENSMAUG00000003829) Mfap3 (ENSMAUG00000022064) Galnt10 (ENSMAUG00000022260) Sap30l (ENSMAUG00000001548) Hand1 (ENSMAUG00000022272) Larp1 (ENSMAUG00000001385) Gm12248 (ENSMAUG00000021997) ENSMAUG00000022252 Gemin5 (ENSMAUG00000005361) Mrpl22 (ENSMAUG00000021980) Igtp (ENSMAUG00000010911) ##22 ENSMAUG00000021919 ##22 4930438A08Rik (ENSMAUG00000022004) Zfp692 (ENSMAUG00000021817) Zfp672 (ENSMAUG00000009945) Sh3bp5l (ENSMAUG00000009441) Lypd8 (ENSMAUG00000021714) Lypd9 (ENSMAUG00000021917) Or2z2 (ENSMAUG00000010493) ENSMAUG00000010479 Or2av9 (ENSMAUG00000020712) ENSMAUG00000020684 Trim58 (ENSMAUG00000020919) ENSMAUG00000013852 ENSMAUG00000010641 Fam183b (ENSMAUG00000021857) ENSMAUG00000002837 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000260018.A.a.a.b.b.l ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 21 G3bp1 (ENSPEMG00000020531) Glra1 (ENSPEMG00000024408) Nmur2 (ENSPEMG00000013761) Gria1 (ENSPEMG00000020992) Fam114a2 (ENSPEMG00000020352) Mfap3 (ENSPEMG00000029755) Galnt10 (ENSPEMG00000021112) Sap30l (ENSPEMG00000029956) Hand1 (ENSPEMG00000021867) Larp1 (ENSPEMG00000022523) Cnot8 (ENSPEMG00000021153) Gemin5 (ENSPEMG00000014992) Mrpl22 (ENSPEMG00000021188) ENSPEMG00000028084 ##22 ENSPEMG00000028532 ENSPEMG00000028425 ##22 ENSPEMG00000022636 ##22 4930438A08Rik (ENSPEMG00000021874) Zfp692 (ENSPEMG00000013950) Zfp672 (ENSPEMG00000028923) Sh3bp5l (ENSPEMG00000030308) ENSPEMG00000023697 1810065E05Rik (ENSPEMG00000021797) ENSPEMG00000028927 Lypd9 (ENSPEMG00000022775) Or2z2 (ENSPEMG00000004720) ENSPEMG00000014988 ENSPEMG00000030990 ENSPEMG00000026900 ENSPEMG00000030003 ENSPEMG00000025254 Northern American deer mouse MODERN SPECIES 21 Glra1 (ENSPEMG00000024408) Nmur2 (ENSPEMG00000013761) Gria1 (ENSPEMG00000020992) Fam114a2 (ENSPEMG00000020352) Mfap3 (ENSPEMG00000029755) Galnt10 (ENSPEMG00000021112) Sap30l (ENSPEMG00000029956) Hand1 (ENSPEMG00000021867) Larp1 (ENSPEMG00000022523) Cnot8 (ENSPEMG00000021153) Gemin5 (ENSPEMG00000014992) Mrpl22 (ENSPEMG00000021188) ENSPEMG00000028084 ##22 ENSPEMG00000028532 ENSPEMG00000028425 ##22 ENSPEMG00000022636 ##22 4930438A08Rik (ENSPEMG00000021874) Zfp692 (ENSPEMG00000013950) Zfp672 (ENSPEMG00000028923) Sh3bp5l (ENSPEMG00000030308) ENSPEMG00000023697 1810065E05Rik (ENSPEMG00000021797) ENSPEMG00000028927 Lypd9 (ENSPEMG00000022775) Or2z2 (ENSPEMG00000004720) ENSPEMG00000014988 ENSPEMG00000030990 ENSPEMG00000026900 ENSPEMG00000030003 ENSPEMG00000025254 ENSPEMG00000025020 Prairie vole MODERN SPECIES 15 G3bp1 (ENSMOCG00000005709) Glra1 (ENSMOCG00000022733) Nmur2 (ENSMOCG00000020916) Gria1 (ENSMOCG00000022383) Fam114a2 (ENSMOCG00000003408) Mfap3 (ENSMOCG00000022737) Galnt10 (ENSMOCG00000022339) Sap30l (ENSMOCG00000005889) Hand1 (ENSMOCG00000012912) Larp1 (ENSMOCG00000008920) Gm12248 (ENSMOCG00000018783) ENSMOCG00000002156 Gemin5 (ENSMOCG00000018131) Mrpl22 (ENSMOCG00000021016) ENSMOCG00000014171 ##22 Irgm2 (ENSMOCG00000012064) ##22 4930438A08Rik (ENSMOCG00000019006) Zfp692 (ENSMOCG00000016928) Zfp672 (ENSMOCG00000014653) Sh3bp5l (ENSMOCG00000019283) ENSMOCG00000015542 1810065E05Rik (ENSMOCG00000021034) Or2z2 (ENSMOCG00000002305) Or2av9 (ENSMOCG00000021724) ENSMOCG00000015269 Lypd8l (ENSMOCG00000022238) Trim58 (ENSMOCG00000019086) ENSMOCG00000002169 ENSMOCG00000011805 Fam183b (ENSMOCG00000013813) ENSMOCG00000006893 Murinae ANCESTRAL SPECIES 7 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT01090000259995.a.a.b.a.b.a ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000260018.A.a.a.b.b ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b Mus ANCESTRAL SPECIES 2 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01100000263486.a.b.a.b.b.a.a Mus_A ANCESTRAL SPECIES 2 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01100000263486.a.b.a.b.b.a.a.i Ryukyu mouse MODERN SPECIES 2 Atox1 (MGP_CAROLIEiJ_G0016373) G3bp1 (MGP_CAROLIEiJ_G0016374) Glra1 (MGP_CAROLIEiJ_G0016375) Nmur2 (MGP_CAROLIEiJ_G0016376) Gria1 (MGP_CAROLIEiJ_G0016377) Fam114a2 (MGP_CAROLIEiJ_G0016378) Mfap3 (MGP_CAROLIEiJ_G0016379) Galnt10 (MGP_CAROLIEiJ_G0016380) Sap30l (MGP_CAROLIEiJ_G0016381) Hand1 (MGP_CAROLIEiJ_G0016382) Larp1 (MGP_CAROLIEiJ_G0016383) Cnot8 (MGP_CAROLIEiJ_G0016384) Gemin5 (MGP_CAROLIEiJ_G0016385) Mrpl22 (MGP_CAROLIEiJ_G0016386) MGP_CAROLIEiJ_G0016387 MGP_CAROLIEiJ_G0016388 ##22 MGP_CAROLIEiJ_G0016389 Zfp692 (MGP_CAROLIEiJ_G0016390) Zfp672 (MGP_CAROLIEiJ_G0016391) Sh3bp5l (MGP_CAROLIEiJ_G0016392) Lypd8 (MGP_CAROLIEiJ_G0016393) 1810065E05Rik (MGP_CAROLIEiJ_G0016394) MGP_CAROLIEiJ_G0016395 Lypd9 (MGP_CAROLIEiJ_G0016396) Or2z2 (MGP_CAROLIEiJ_G0016397) MGP_CAROLIEiJ_G0016398 MGP_CAROLIEiJ_G0016400 MGP_CAROLIEiJ_G0016399 MGP_CAROLIEiJ_G0016401 MGP_CAROLIEiJ_G0016402 Or2ab1 (MGP_CAROLIEiJ_G0016403) Mus_B ANCESTRAL SPECIES 2 ENSGT00940000159047 ENSGT01100000263484.A.d ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01100000263486.a.b.a.b.b.a.a.i Mouse MODERN SPECIES 2 G3bp1 (ENSMUSG00000018583) Glra1 (ENSMUSG00000000263) Nmur2 (ENSMUSG00000037393) Gria1 (ENSMUSG00000020524) Fam114a2 (ENSMUSG00000020523) Mfap3 (ENSMUSG00000020522) Galnt10 (ENSMUSG00000020520) Sap30l (ENSMUSG00000020519) Hand1 (ENSMUSG00000037335) Larp1 (ENSMUSG00000037331) Gm12248 (ENSMUSG00000086962) Cnot8 (ENSMUSG00000020515) Gemin5 (ENSMUSG00000037275) Mrpl22 (ENSMUSG00000020514) Igtp (ENSMUSG00000078853) ##22 Irgm2 (ENSMUSG00000069874) ##22 4930438A08Rik (ENSMUSG00000069873) Zfp692 (ENSMUSG00000037243) Zfp672 (ENSMUSG00000049755) Sh3bp5l (ENSMUSG00000013646) Lypd8 (ENSMUSG00000013643) 1810065E05Rik (ENSMUSG00000013653) Gm12253 (ENSMUSG00000058287) Lypd9 (ENSMUSG00000052642) Or2z2 (ENSMUSG00000043314) Or2av9 (ENSMUSG00000050813) Or2t49 (ENSMUSG00000058807) Or2t48 (ENSMUSG00000050818) Or2t29 (ENSMUSG00000064252) Or2t47 (ENSMUSG00000057654) Or2t43 (ENSMUSG00000059279) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000157342 ENSGT00390000010054.a ENSGT00390000011576.b ENSGT00940000156690 ENSGT00390000006633.a ENSGT00940000161111 ENSGT00940000159577 ENSGT00950000183345 ENSGT00940000157328.C ENSGT00390000000080.a.b.m ENSGT00390000000080.a.b.n ENSGT00620000088064 ENSGT00390000002110 ENSGT00950000183007.a.b.g.b.d.a ##22 ENSGT00950000183007.a.b.g.a.b.b.i ##22 ENSGT00950000183007.a.b.g.b.d.b ##22 ENSGT00940000163610 ENSGT00940000161175 ENSGT01100000263521.a.a.b.a.b.b ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648.c.b ENSGT00730000111648.d ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00940000170940 ENSGT01090000260044.D.b.a.a ENSGT00730000111648.c.a ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01100000263486.a.b.a.b.b.a.a.i spretus MODERN SPECIES 2 Atox1 (MGP_SPRETEiJ_G0017215) G3bp1 (MGP_SPRETEiJ_G0017216) Glra1 (MGP_SPRETEiJ_G0017217) Nmur2 (MGP_SPRETEiJ_G0017218) Gria1 (MGP_SPRETEiJ_G0017219) Fam114a2 (MGP_SPRETEiJ_G0017220) Mfap3 (MGP_SPRETEiJ_G0017221) Galnt10 (MGP_SPRETEiJ_G0017222) Sap30l (MGP_SPRETEiJ_G0017223) Hand1 (MGP_SPRETEiJ_G0017224) Larp1 (MGP_SPRETEiJ_G0017225) Cnot8 (MGP_SPRETEiJ_G0017226) Gemin5 (MGP_SPRETEiJ_G0017227) Mrpl22 (MGP_SPRETEiJ_G0017228) Igtp (MGP_SPRETEiJ_G0017229) ##22 Irgm2 (MGP_SPRETEiJ_G0017230) ##22 MGP_SPRETEiJ_G0017231 MGP_SPRETEiJ_G0017232 Zfp672 (MGP_SPRETEiJ_G0017233) Sh3bp5l (MGP_SPRETEiJ_G0017234) Lypd8 (MGP_SPRETEiJ_G0017235) 1810065E05Rik (MGP_SPRETEiJ_G0017236) MGP_SPRETEiJ_G0017237 Lypd9 (MGP_SPRETEiJ_G0017238) Or2z2 (MGP_SPRETEiJ_G0017239) MGP_SPRETEiJ_G0017240 MGP_SPRETEiJ_G0017241 MGP_SPRETEiJ_G0017242 MGP_SPRETEiJ_G0017243 Or2ab1 (MGP_SPRETEiJ_G0017244) Lypd8l (MGP_SPRETEiJ_G0017245) Steppe mouse MODERN SPECIES 2392 Larp1 (ENSMSIG00000003419) ENSMSIG00000003363 Gm12248 (ENSMSIG00000003301) ENSMSIG00000003265 Gemin5 (ENSMSIG00000003034) Mrpl22 (ENSMSIG00000002988) ENSMSIG00000002969 ##22 Irgm2 (ENSMSIG00000002954) ##22 4930438A08Rik (ENSMSIG00000002887) Zfp692 (ENSMSIG00000002854) Zfp672 (ENSMSIG00000002838) ENSMSIG00000002826 Sh3bp5l (ENSMSIG00000002756) Lypd8 (ENSMSIG00000002688) Shrew mouse MODERN SPECIES 5 Atox1 (MGP_PahariEiJ_G0017508) G3bp1 (MGP_PahariEiJ_G0017509) Glra1 (MGP_PahariEiJ_G0017510) Nmur2 (MGP_PahariEiJ_G0017511) Gria1 (MGP_PahariEiJ_G0017512) Fam114a2 (MGP_PahariEiJ_G0017513) Mfap3 (MGP_PahariEiJ_G0017514) Galnt10 (MGP_PahariEiJ_G0017515) Sap30l (MGP_PahariEiJ_G0017516) Hand1 (MGP_PahariEiJ_G0017517) Larp1 (MGP_PahariEiJ_G0017518) Cnot8 (MGP_PahariEiJ_G0017519) Gemin5 (MGP_PahariEiJ_G0017520) Mrpl22 (MGP_PahariEiJ_G0017521) MGP_PahariEiJ_G0017522 MGP_PahariEiJ_G0017523 ##22 MGP_PahariEiJ_G0017524 Zfp692 (MGP_PahariEiJ_G0017525) MGP_PahariEiJ_G0017526 Sh3bp5l (MGP_PahariEiJ_G0017527) Lypd8 (MGP_PahariEiJ_G0017528) 1810065E05Rik (MGP_PahariEiJ_G0017529) MGP_PahariEiJ_G0017530 Lypd9 (MGP_PahariEiJ_G0017531) Or2z2 (MGP_PahariEiJ_G0017532) MGP_PahariEiJ_G0017533 MGP_PahariEiJ_G0017534 MGP_PahariEiJ_G0017535 MGP_PahariEiJ_G0017536 MGP_PahariEiJ_G0017537 MGP_PahariEiJ_G0017538 Rat MODERN SPECIES 1 LOC120095104 (ENSRNOG00000062939) LOC102552882 (ENSRNOG00000038474) ENSRNOG00000069020 Gria1 (ENSRNOG00000045816) Fam114a2 (ENSRNOG00000002423) Mfap3 (ENSRNOG00000002443) Galnt10 (ENSRNOG00000002488) Sap30l (ENSRNOG00000002575) Hand1 (ENSRNOG00000002582) Larp1 (ENSRNOG00000031544) Atp5mk-ps2 (ENSRNOG00000042869) Faxdc2 (ENSRNOG00000027259) Cnot8 (ENSRNOG00000002630) Gemin5 (ENSRNOG00000002645) Mrpl22 (ENSRNOG00000027039) Igtp (ENSRNOG00000027008) ##22 RGD1308564 (ENSRNOG00000043116) Zfp692 (ENSRNOG00000002682) Zfp672 (ENSRNOG00000002713) Sh3bp5l (ENSRNOG00000054400) Lypd8 (ENSRNOG00000026844) LOC691277 (ENSRNOG00000053179) LOC24906 (ENSRNOG00000002820) LOC691286 (ENSRNOG00000002845) Or2z2 (ENSRNOG00000026801) Or2av10 (ENSRNOG00000026714) Or2av9 (ENSRNOG00000026695) Or2t48e (ENSRNOG00000070956) Or2t48b (ENSRNOG00000069599) Or2t48 (ENSRNOG00000068864) Or2t47e (ENSRNOG00000067204) Upper Galilee mountains blind mole rat MODERN SPECIES 1192 Gria1 (ENSNGAG00000004680) Fam114a2 (ENSNGAG00000016012) Mfap3 (ENSNGAG00000000606) Galnt10 (ENSNGAG00000010140) Sap30l (ENSNGAG00000020242) Hand1 (ENSNGAG00000000636) Larp1 (ENSNGAG00000001098) Gm12248 (ENSNGAG00000012441) Cnot8 (ENSNGAG00000012898) Gemin5 (ENSNGAG00000018147) Mrpl22 (ENSNGAG00000000923) ENSNGAG00000017823 ##22 Rodentia_A ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.b ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000154451 ENSGT00390000017923 ENSGT00940000158245 ENSGT00940000158124 ENSGT00390000009391.b ENSGT00390000016270 ENSGT00940000162308 ENSGT00390000013425 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000032445 ENSHGLG00000045105 ENSHGLG00000039978 ZNF354A (ENSHGLG00000005975) ENSHGLG00000013793 COL23A1 (ENSHGLG00000039641) PHYKPL (ENSHGLG00000018644) HNRNPAB (ENSHGLG00000014490) NHP2 (ENSHGLG00000043955) RMND5B (ENSHGLG00000032587) ENSHGLG00000017675 ENSHGLG00000017987 ##22 ENSHGLG00000036718 ENSHGLG00000048856 ##22 ENSHGLG00000037097 ##22 ENSHGLG00000034913 ##22 ENSHGLG00000015897 SLC36A3 (ENSHGLG00000034529) ENSHGLG00000047632 CCDC69 (ENSHGLG00000043600) ANXA6 (ENSHGLG00000019363) TNIP1 (ENSHGLG00000016203) GPX3 (ENSHGLG00000050015) ENSHGLG00000010810 HINT1 (ENSHGLG00000035928) CDC42SE2 (ENSHGLG00000046813) RAPGEF6 (ENSHGLG00000009326) ENSHGLG00000008395 ENSHGLG00000045572 FNIP1 (ENSHGLG00000005873) MEIKIN (ENSHGLG00000010823) Hystricomorpha_a ANCESTRAL SPECIES 28 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000154451 ENSGT00390000017923 ENSGT00940000158245 ENSGT00940000158124 ENSGT00390000009391.b ENSGT00390000016270 ENSGT00940000162308 ENSGT00390000013425 Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000162292 ENSGT00940000162330 ENSGT00940000161487 ENSGT00940000160245 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000154451 ENSGT00390000017923 ENSGT00940000158245 ENSGT00940000158124 ENSGT00390000009391.b ENSGT00390000016270 ENSGT00940000162308 Long-tailed chinchilla MODERN SPECIES 115 ENSCLAG00000010435 ZFP2 (ENSCLAG00000011174) ZNF354B (ENSCLAG00000013514) ENSCLAG00000017710 ENSCLAG00000010643 ZNF354A (ENSCLAG00000014648) CLK4 (ENSCLAG00000013604) COL23A1 (ENSCLAG00000011420) PHYKPL (ENSCLAG00000014481) HNRNPAB (ENSCLAG00000011022) NHP2 (ENSCLAG00000016005) RMND5B (ENSCLAG00000012053) N4BP3 (ENSCLAG00000013512) ENSCLAG00000011265 ##22 ENSCLAG00000017811 ##22 ENSCLAG00000010886 ##22 ENSCLAG00000017791 ##22 SLC36A2 (ENSCLAG00000012068) SLC36A3 (ENSCLAG00000013137) GM2A (ENSCLAG00000010551) ENSCLAG00000010402 ANXA6 (ENSCLAG00000011840) TNIP1 (ENSCLAG00000012681) GPX3 (ENSCLAG00000012373) HINT1 (ENSCLAG00000012693) LYRM7 (ENSCLAG00000012806) CDC42SE2 (ENSCLAG00000010493) RAPGEF6 (ENSCLAG00000014812) FNIP1 (ENSCLAG00000015635) MEIKIN (ENSCLAG00000013946) ACSL6 (ENSCLAG00000015484) Guinea pig DUPLICATION Guinea pig MODERN SPECIES 81 ENSCPOG00000025531 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000034918 ##22 SLC36A2 (ENSCPOG00000008306) SLC36A3 (ENSCPOG00000009677) GM2A (ENSCPOG00000040130) CCDC69 (ENSCPOG00000031762) ANXA6 (ENSCPOG00000005272) TNIP1 (ENSCPOG00000006613) GPX3 (ENSCPOG00000006611) HINT1 (ENSCPOG00000023046) LYRM7 (ENSCPOG00000039454) ENSCPOG00000000849 CDC42SE2 (ENSCPOG00000039035) RAPGEF6 (ENSCPOG00000010242) FNIP1 (ENSCPOG00000030775) Guinea pig MODERN SPECIES 81 ENSCPOG00000025531 ##22 ENSCPOG00000037647 ##22 ENSCPOG00000039847 ##22 ENSCPOG00000037129 ##22 ENSCPOG00000030030 ##22 ENSCPOG00000036108 ##22 ENSCPOG00000034918 ##22 SLC36A2 (ENSCPOG00000008306) SLC36A3 (ENSCPOG00000009677) GM2A (ENSCPOG00000040130) CCDC69 (ENSCPOG00000031762) ANXA6 (ENSCPOG00000005272) TNIP1 (ENSCPOG00000006613) GPX3 (ENSCPOG00000006611) HINT1 (ENSCPOG00000023046) LYRM7 (ENSCPOG00000039454) Sciuridae ANCESTRAL SPECIES 33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b ##22 Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 104 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338.i ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.b.h ##22 Alpin marmot MODERN SPECIES 142 ENSMMMG00000021042 ENSMMMG00000021040 ENSMMMG00000021035 MGAT1 (ENSMMMG00000021031) BTNL9 (ENSMMMG00000021019) ENSMMMG00000021017 ENSMMMG00000021009 ENSMMMG00000021006 ENSMMMG00000021003 ENSMMMG00000020991 TRIM7 (ENSMMMG00000020988) TRIM41 (ENSMMMG00000020984) RACK1 (ENSMMMG00000020964) ENSMMMG00000020961 ENSMMMG00000020918 ##22 ENSMMMG00000020898 ##22 ENSMMMG00000020890 ##22 Marmotini_b ANCESTRAL SPECIES 185 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338.i ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461.`c ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.b.h ##22 Arctic ground squirrel MODERN SPECIES 788 ENSUPAG00010005649 ENSUPAG00010005639 TRIM7 (ENSUPAG00010005630) TRIM41 (ENSUPAG00010005621) RACK1 (ENSUPAG00010005608) ENSUPAG00010005606 ENSUPAG00010005600 ENSUPAG00010005587 ##22 ENSUPAG00010005584 ##22 ENSUPAG00010005582 ##22 Marmotini ANCESTRAL SPECIES 104 ENSGT00950000183007.a.b.g.b.h ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.a.b ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338.i ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b Alpin marmot MODERN SPECIES 142 ENSMMMG00000020890 ##22 ENSMMMG00000020898 ##22 ENSMMMG00000020918 ##22 ENSMMMG00000020961 RACK1 (ENSMMMG00000020964) TRIM41 (ENSMMMG00000020984) TRIM7 (ENSMMMG00000020988) ENSMMMG00000020991 ENSMMMG00000021003 ENSMMMG00000021006 ENSMMMG00000021009 ENSMMMG00000021017 BTNL9 (ENSMMMG00000021019) MGAT1 (ENSMMMG00000021031) ENSMMMG00000021035 ENSMMMG00000021040 Marmotini_b ANCESTRAL SPECIES 185 ENSGT00950000183007.a.b.g.b.h ##22 ENSGT00950000183007.a.b.g.b.g ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT01100000263517.b.d.m.a.b ENSGT00940000154461.`c ENSGT00940000154294.k.a ENSGT01030000234669.A ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a.a ENSGT01090000260018.D.d.a.b ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338.i ENSGT00940000162750 ENSGT00530000063632.B ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.c.a.b.b.b Arctic ground squirrel MODERN SPECIES 788 ENSUPAG00010005582 ##22 ENSUPAG00010005584 ##22 ENSUPAG00010005587 ##22 ENSUPAG00010005600 ENSUPAG00010005606 RACK1 (ENSUPAG00010005608) TRIM41 (ENSUPAG00010005621) TRIM7 (ENSUPAG00010005630) ENSUPAG00010005639 ENSUPAG00010005649 Atlantogenata ANCESTRAL SPECIES ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000163611 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 Afrotheria ANCESTRAL SPECIES 123 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Afrotheria_a ANCESTRAL SPECIES 127 ENSGT00940000162816 ENSGT01030000234648.a.b.a.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 ENSGT01090000259995.b.a.a.b ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.l ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.b.b ##22 Elephant DUPLICATION Elephant MODERN SPECIES 2 TMED9 (ENSLAFG00000011281) B4GALT7 (ENSLAFG00000031314) N4BP3 (ENSLAFG00000001049) RMND5B (ENSLAFG00000012824) NHP2 (ENSLAFG00000012828) HNRNPAB (ENSLAFG00000001189) PHYKPL (ENSLAFG00000001190) COL23A1 (ENSLAFG00000030471) CLK4 (ENSLAFG00000015899) ENSLAFG00000026032 ENSLAFG00000032636 ZNF354A (ENSLAFG00000002909) ENSLAFG00000017519 PROP1 (ENSLAFG00000004721) ENSLAFG00000018221 ENSLAFG00000029002 ##22 ENSLAFG00000031042 ##22 ENSLAFG00000032010 ##22 ENSLAFG00000028506 TRIM52 (ENSLAFG00000011760) RACK1 (ENSLAFG00000011750) ENSLAFG00000011744 TRIM7 (ENSLAFG00000012263) ENSLAFG00000029708 ENSLAFG00000029830 ENSLAFG00000031758 ENSLAFG00000029252 ENSLAFG00000027573 ENSLAFG00000031543 ENSLAFG00000030931 ENSLAFG00000028643 Elephant MODERN SPECIES 2 ENSLAFG00000028767 ENSLAFG00000029553 ENSLAFG00000028643 ENSLAFG00000030931 ENSLAFG00000031543 ENSLAFG00000027573 ENSLAFG00000029252 ENSLAFG00000031758 ENSLAFG00000029830 ENSLAFG00000029708 TRIM7 (ENSLAFG00000012263) ENSLAFG00000011744 RACK1 (ENSLAFG00000011750) TRIM52 (ENSLAFG00000011760) ENSLAFG00000028506 ENSLAFG00000032010 ##22 ENSLAFG00000031042 ##22 ENSLAFG00000029002 ##22 ENSLAFG00000018221 PROP1 (ENSLAFG00000004721) ENSLAFG00000017519 ZNF354A (ENSLAFG00000002909) ENSLAFG00000032636 ENSLAFG00000026032 CLK4 (ENSLAFG00000015899) COL23A1 (ENSLAFG00000030471) PHYKPL (ENSLAFG00000001190) HNRNPAB (ENSLAFG00000001189) NHP2 (ENSLAFG00000012828) RMND5B (ENSLAFG00000012824) N4BP3 (ENSLAFG00000001049) Xenarthra ANCESTRAL SPECIES 393 ENSGT01090000260018.A.a.b ENSGT01090000260018.D.d.a ENSGT01090000260018.D.d.b ENSGT01030000234669.A ENSGT00940000154294.k.a ENSGT00940000154461 ENSGT00940000154294.k.b ENSGT01100000263517.b.d.m.a.b ENSGT00950000183007.a.b.g.a.b.b ##22 ENSGT00950000183007.a.b.g.b ##22 ENSGT00950000183007.a.b.g.a.a ##22 ENSGT00950000183007.a.b.g.a.b.a ##22 Armadillo MODERN SPECIES 2556 ENSDNOG00000015279 ENSDNOG00000032410 ENSDNOG00000049195 TRIM7 (ENSDNOG00000036990) TRIM41 (ENSDNOG00000000765) RACK1 (ENSDNOG00000000767) TRIM52 (ENSDNOG00000042088) ENSDNOG00000040435 ENSDNOG00000037309 ##22 ENSDNOG00000045232 ##22 ENSDNOG00000046683 ##22 ENSDNOG00000047478 ##22 ENSDNOG00000036141 ##22 Theria ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Eutheria ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Glires ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Cricetidae ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183007.a.b.h ##22 Northern American deer mouse MODERN SPECIES 21 Or2y17 (ENSPEMG00000030604) Or2y1e (ENSPEMG00000024557) ENSPEMG00000029606 ENSPEMG00000031159 ENSPEMG00000028956 Mgat1 (ENSPEMG00000005968) Zfp62 (ENSPEMG00000012272) Btnl9 (ENSPEMG00000015855) Or2o1 (ENSPEMG00000008066) Or2t26 (ENSPEMG00000007090) Or2v1 (ENSPEMG00000025959) Or2v2 (ENSPEMG00000025836) Ifi47 (ENSPEMG00000017464) ##22 ENSPEMG00000029540 ENSPEMG00000018053 ##22 ENSPEMG00000015679 ##22 ENSPEMG00000028500 ##22 Irgm1 (ENSPEMG00000018645) ##22 Trim7 (ENSPEMG00000012640) Trim41 (ENSPEMG00000017879) Rack1 (ENSPEMG00000011124) ENSPEMG00000027931 Sgcd (ENSPEMG00000011649) Timd4 (ENSPEMG00000012210) ENSPEMG00000030816 ENSPEMG00000024940 ENSPEMG00000025066 ENSPEMG00000028909 ENSPEMG00000019712 ENSPEMG00000029530 Havcr2 (ENSPEMG00000019286) Actinopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.b ##22 Neopterygii DUPLICATION Neopterygii ANCESTRAL SPECIES 285 ENSGT00390000018560.a.a.b ENSGT00940000164898 ENSGT00940000166384 ENSGT00940000165943 ENSGT00940000165396.A ENSGT00940000160881 ENSGT00950000183007.a.b.i ##22 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000164813 ENSGT00940000154641.A Spotted gar MODERN SPECIES 663 ENSLOCG00000005033 ENSLOCG00000005019 ENSLOCG00000004999 psmc4 (ENSLOCG00000004980) GRAMD1A (ENSLOCG00000004963) scn1bb (ENSLOCG00000004933) si:ch211-225p5.8 (ENSLOCG00000004921) pycard (ENSLOCG00000004909) pycard (ENSLOCG00000004898) etsrp (ENSLOCG00000004877) fli1rs (ENSLOCG00000004852) ENSLOCG00000004842 ENSLOCG00000017671 ##22 ENSLOCG00000004824 upk1a (ENSLOCG00000004802) ENSLOCG00000004770 ##22 ppox (ENSLOCG00000004755) kcnj21 (ENSLOCG00000004736) fbl (ENSLOCG00000004721) dyrk1b (ENSLOCG00000004700) ENSLOCG00000004689 ENSLOCG00000004674 grik5 (ENSLOCG00000004659) ENSLOCG00000004648 ENSLOCG00000004635 ENSLOCG00000004622 DEDD2 (ENSLOCG00000004607) rabac1 (ENSLOCG00000004589) ENSLOCG00000004571 ENSLOCG00000004559 ENSLOCG00000004548 Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00950000183155.a.a.a.a.a.b ENSGT00950000183155.a.b.b ENSGT00950000183155.a.b.a.a.b.c.b ENSGT00950000183155.a.a.a.a.b ENSGT00940000156038.a.b ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00990000205757 ENSGT00980000198998 ENSGT00940000166706 ENSGT00940000160297 ENSGT00940000160272 ENSGT00390000013276 ENSGT00940000166159 ENSGT00940000166537 ENSGT00950000183007.a.b.i ##22 ENSGT00390000008744 ENSGT00550000074792.b ENSGT00940000160345 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000165943 ENSGT00940000166384 ENSGT00940000164898 ENSGT00390000018560.a.a.b ENSGT00940000161007 ENSGT00390000018560.a.a.a.a.a ENSGT01020000230346.D ENSGT00940000164072 ENSGT00410000029015 ENSGT00950000183058.B ENSGT01100000263535.a.b Clupeocephala ANCESTRAL SPECIES ENSGT00950000183007.a.b.i ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183007.a.b.i ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00950000183007.a.b.i ##22 Atlantic herring MODERN SPECIES 2 fxyd3 (ENSCHAG00000012788) si:ch73-343g19.4 (ENSCHAG00000012813) ATP4A (ENSCHAG00000012847) gapdhs (ENSCHAG00000013141) tmem147 (ENSCHAG00000015114) sult2st3 (ENSCHAG00000015156) sult2st3 (ENSCHAG00000015175) ENSCHAG00000015237 ENSCHAG00000015285 ENSCHAG00000015350 FCGBP (ENSCHAG00000015378) rbm42 (ENSCHAG00000015565) ENSCHAG00000015594 ENSCHAG00000015625 upk1a (ENSCHAG00000015638) ENSCHAG00000015716 ##22 ppox (ENSCHAG00000015727) kcnj21 (ENSCHAG00000015796) fbl (ENSCHAG00000015849) dyrk1b (ENSCHAG00000015932) ENSCHAG00000016039 zp3d.2 (ENSCHAG00000016084) fli1rs (ENSCHAG00000016142) etsrp (ENSCHAG00000016286) pycard (ENSCHAG00000016298) si:ch211-225p5.8 (ENSCHAG00000016304) ENSCHAG00000016311 ENSCHAG00000016336 scn1ba (ENSCHAG00000016344) psmc4 (ENSCHAG00000016362) ENSCHAG00000016768 Neopterygii ANCESTRAL SPECIES ENSGT00950000183007.a.b.j ##22 Spotted gar MODERN SPECIES 663 rabac1 (ENSLOCG00000004589) DEDD2 (ENSLOCG00000004607) ENSLOCG00000004622 ENSLOCG00000004635 ENSLOCG00000004648 grik5 (ENSLOCG00000004659) ENSLOCG00000004674 ENSLOCG00000004689 dyrk1b (ENSLOCG00000004700) fbl (ENSLOCG00000004721) kcnj21 (ENSLOCG00000004736) ppox (ENSLOCG00000004755) ENSLOCG00000004770 ##22 upk1a (ENSLOCG00000004802) ENSLOCG00000004824 ENSLOCG00000017671 ##22 ENSLOCG00000004842 fli1rs (ENSLOCG00000004852) etsrp (ENSLOCG00000004877) pycard (ENSLOCG00000004898) pycard (ENSLOCG00000004909) si:ch211-225p5.8 (ENSLOCG00000004921) scn1bb (ENSLOCG00000004933) GRAMD1A (ENSLOCG00000004963) psmc4 (ENSLOCG00000004980) ENSLOCG00000004999 ENSLOCG00000005019 ENSLOCG00000005033 ENSLOCG00000005050 ENSLOCG00000005070 ENSLOCG00000005091 Elephant shark DUPLICATION Elephant shark DUPLICATION Elephant shark MODERN SPECIES 655 ENSCMIG00000002518 #22 Elephant shark MODERN SPECIES 2495 ENSCMIG00000000984 #22 Elephant shark DUPLICATION Elephant shark DUPLICATION Elephant shark DUPLICATION Elephant shark MODERN SPECIES 551 ENSCMIG00000001971 #22 Elephant shark MODERN SPECIES 868 ENSCMIG00000003493 #22 Elephant shark MODERN SPECIES 1822 ENSCMIG00000017689 ENSCMIG00000017686 ENSCMIG00000017680 ENSCMIG00000017655 ENSCMIG00000017625 #22 Elephant shark MODERN SPECIES 992 ENSCMIG00000000682 #22