Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805	ENSGT00950000183184.a.a.a #35
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805	ENSGT00950000183184.a.a.a #35	ENSGT00940000154360.A.b.a #36
Perciformes	ANCESTRAL SPECIES	23	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #35	ENSGT00940000154360.A.b.a #36	ENSGT00940000162768.B.a #37
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #35	ENSGT00940000154360.A.b.a #36	ENSGT00940000162768.B.a #37
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000021571 #7	ENSCGOG00000021597 #8	fkbp7 (ENSCGOG00000021818) #9	osgepl1 (ENSCGOG00000021820) #10	alkbh6 (ENSCGOG00000021822) #11	pms1 (ENSCGOG00000021826) #14	adat3 (ENSCGOG00000021904) #12	ormdl1 (ENSCGOG00000021905) #13	mstnb (ENSCGOG00000021916) #15	ENSCGOG00000021934 #16	hibch (ENSCGOG00000021938) #17	lss (ENSCGOG00000021990) #18	ENSCGOG00000022398 #19	ybey (ENSCGOG00000022413) #20	usp37 (ENSCGOG00000022416) #21	cnot9 (ENSCGOG00000022431) #22	PLCD4 (ENSCGOG00000022467) #23	ZNF142 (ENSCGOG00000023002) #24	bcs1l (ENSCGOG00000023004) #25	zgc:136333 (ENSCGOG00000023008) #26	TNS1 (ENSCGOG00000023029) #27	igfbp5b (ENSCGOG00000023194) #28	igfbp2b (ENSCGOG00000023204) #29	slc4a3 (ENSCGOG00000023208) #30	COL5A2 (ENSCGOG00000023213) #31	gulp1a (ENSCGOG00000023238) #32	ENSCGOG00000023244	ENSCGOG00000023247 #33	ENSCGOG00000023279 #34	ENSCGOG00000023443 #35	lrrc3 (ENSCGOG00000012897) #36
Pike perch	MODERN SPECIES	191	ENSSLUG00000019736	ENSSLUG00000018646	fkbp7 (ENSSLUG00000018593) #9	osgepl1 (ENSSLUG00000018585) #10	alkbh6 (ENSSLUG00000018581) #11	adat3 (ENSSLUG00000018579) #12	ormdl1 (ENSSLUG00000018570) #13	pms1 (ENSSLUG00000018218) #14	mstnb (ENSSLUG00000018180) #15	ENSSLUG00000018175 #16	hibch (ENSSLUG00000017666) #17	lss (ENSSLUG00000016140) #18	ENSSLUG00000015955 #19	ybey (ENSSLUG00000015934) #20	usp37 (ENSSLUG00000015895) #21	cnot9 (ENSSLUG00000015860) #22	PLCD4 (ENSSLUG00000015812) #23	ENSSLUG00000015766 #25	ENSSLUG00000015731 #23
Cottioidei	ANCESTRAL SPECIES	14	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34
Stickleback	MODERN SPECIES	16	ENSGACG00000002673 #7	ENSGACG00000002657 #8	fkbp7 (ENSGACG00000002654) #9	osgepl1 (ENSGACG00000002648) #10	alkbh6 (ENSGACG00000002647) #11	adat3 (ENSGACG00000002645) #12	ormdl1 (ENSGACG00000002642) #13	pms1 (ENSGACG00000002634) #14	mstnb (ENSGACG00000002630) #15	ENSGACG00000002627	hibch (ENSGACG00000002609) #17	lss (ENSGACG00000002592) #18	ENSGACG00000002570 #19	ybey (ENSGACG00000002567) #20	usp37 (ENSGACG00000002557) #21	cnot9 (ENSGACG00000002543) #22	PLCD4 (ENSGACG00000002540) #23	ZNF142 (ENSGACG00000002534) #24	zgc:136333 (ENSGACG00000002514) #26	TNS1 (ENSGACG00000002511) #27	igfbp5b (ENSGACG00000002508) #28	igfbp2b (ENSGACG00000002506) #29	slc4a3 (ENSGACG00000002501) #30	COL5A2 (ENSGACG00000002409) #31	gulp1a (ENSGACG00000002401) #32	ENSGACG00000002393 #33	ENSGACG00000002387 #34	gjc4b (ENSGACG00000002384)	CXCR2 (ENSGACG00000002380)	faima (ENSGACG00000002376)	ENSGACG00000002367
Lumpfish	MODERN SPECIES	13	ENSCLMG00005009983	ENSCLMG00005009982	SYMPK (ENSCLMG00005004930)	SLC35F5 (ENSCLMG00005004215)	ENSCLMG00005004213	gpr39 (ENSCLMG00005004212)	LYPD1 (ENSCLMG00005004211)	ftcdnl1 (ENSCLMG00005019254)	ENSCLMG00005019253	ENSCLMG00005019250	tfg (ENSCLMG00005019249)	jagn1a (ENSCLMG00005019248)	ENSCLMG00005019247 #19	ybey (ENSCLMG00005019246) #20	usp37 (ENSCLMG00005019240) #21	CNOT9 (ENSCLMG00005019237) #22	PLCD4 (ENSCLMG00005018795) #23	ZNF142 (ENSCLMG00005018790) #24	bcs1l (ENSCLMG00005018789) #25	zgc:136333 (ENSCLMG00005018672) #26	igfbp5b (ENSCLMG00005018668) #28	ENSCLMG00005018667 #29	slc4a3 (ENSCLMG00005018665) #30	COL5A2 (ENSCLMG00005018662) #31	gulp1a (ENSCLMG00005018660) #32	ENSCLMG00005018659 #33	ENSCLMG00005017855 #34	hspe1 (ENSCLMG00005017849)	hspd1 (ENSCLMG00005017848)	coq10b (ENSCLMG00005017847)	SF3B1 (ENSCLMG00005017761)
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805	ENSGT00950000183184.a.a.a #35	ENSGT00940000154360.A.b.a #36
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #35	ENSGT00940000154360.A.b.a #36	ENSGT00940000162768.B.a #37
European seabass	MODERN SPECIES	5	ENSDLAG00005022435 #9	osgepl1 (ENSDLAG00005022441) #10	adat3 (ENSDLAG00005022449) #12	ENSDLAG00005022445 #11	ormdl1 (ENSDLAG00005027751) #13	pms1 (ENSDLAG00005022460) #14	mstnb (ENSDLAG00005022521) #15	ENSDLAG00005022536 #16	hibch (ENSDLAG00005022541) #17	LSS (ENSDLAG00005022621) #18	ENSDLAG00005022735	ENSDLAG00005022739	ENSDLAG00005022744 #19	YBEY (ENSDLAG00005034841) #20	USP37 (ENSDLAG00005022800) #21	CNOT9 (ENSDLAG00005022857) #22	PLCD4 (ENSDLAG00005022885) #23	ZNF142 (ENSDLAG00005023256) #24	zgc:136333 (ENSDLAG00005023265) #26	TNS1 (ENSDLAG00005023305) #27	igfbp5b (ENSDLAG00005024114) #28	igfbp2b (ENSDLAG00005024118) #29	slc4a3 (ENSDLAG00005024195) #30	ENSDLAG00005024788 #31	gulp1a (ENSDLAG00005004339) #32	ENSDLAG00005033365 #33	ENSDLAG00005004586 #34	ENSDLAG00005005708 #35	lrrc3 (ENSDLAG00005031007) #36	pcbp3 (ENSDLAG00005005870) #37	ENSDLAG00005006140
Large yellow croaker	MODERN SPECIES		ENSLCRG00005014720	hdac4 (ENSLCRG00005013772)	twist2 (ENSLCRG00005013760)	ENSLCRG00005013759	asb1 (ENSLCRG00005013758)	traf3ip1 (ENSLCRG00005013756)	ADARB1 (ENSLCRG00005013696)	ENSLCRG00005013693	ENSLCRG00005013688	ENSLCRG00005013687	zgc:162396 (ENSLCRG00005013685)	zgc:162780 (ENSLCRG00005013684)	ENSLCRG00005013683 #19	ybey (ENSLCRG00005013682) #20	usp37 (ENSLCRG00005013676) #21	cnot9 (ENSLCRG00005013674) #22	PLCD4 (ENSLCRG00005013664) #23	ZNF142 (ENSLCRG00005013660) #24	bcs1l (ENSLCRG00005013659) #25	CYP27A1 (ENSLCRG00005013658) #26	TNS1 (ENSLCRG00005012097) #27	igfbp5b (ENSLCRG00005012082) #28	igfbp2b (ENSLCRG00005012081) #29	slc4a3 (ENSLCRG00005009948) #30	COL5A2 (ENSLCRG00005007993) #31	gulp1a (ENSLCRG00005007966) #32	ENSLCRG00005007962 #33	ENSLCRG00005007405 #34	ENSLCRG00005007392 #35	lrrc3 (ENSLCRG00005007390) #36	pcbp3 (ENSLCRG00005007381) #37
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010009144 #7	ENSSAUG00010004954 #8	fkbp7 (ENSSAUG00010004880) #9	osgepl1 (ENSSAUG00010004873) #10	alkbh6 (ENSSAUG00010004870) #11	adat3 (ENSSAUG00010004867) #12	ormdl1 (ENSSAUG00010004864) #13	pms1 (ENSSAUG00010004800) #14	mstnb (ENSSAUG00010004791) #15	ENSSAUG00010004790 #16	hibch (ENSSAUG00010004770) #17	lss (ENSSAUG00010004683) #18	ENSSAUG00010004668 #19	ybey (ENSSAUG00010004664) #20	usp37 (ENSSAUG00010004648) #21	cnot9 (ENSSAUG00010004638) #22	PLCD4 (ENSSAUG00010004216) #23	ZNF142 (ENSSAUG00010004108) #24	bcs1l (ENSSAUG00010004068) #25	zgc:136333 (ENSSAUG00010015642) #26	TNS1 (ENSSAUG00010015615) #27	igfbp5b (ENSSAUG00010015605) #28	igfbp2b (ENSSAUG00010015599) #29	slc4a3 (ENSSAUG00010015089) #30	COL5A2 (ENSSAUG00010014375) #31	gulp1a (ENSSAUG00010014239) #32	ENSSAUG00010014232 #33	ENSSAUG00010014112 #34	ENSSAUG00010014107	FAM171B (ENSSAUG00010014104) #35	lrrc3 (ENSSAUG00010014103) #36
Ballan wrasse	MODERN SPECIES	55	lss (ENSLBEG00000028041) #18	hibch (ENSLBEG00000028083) #17	ENSLBEG00000028129 #16	mstnb (ENSLBEG00000028147) #15	pms1 (ENSLBEG00000028137) #14	ormdl1 (ENSLBEG00000028157) #13	adat3 (ENSLBEG00000028168) #12	alkbh6 (ENSLBEG00000028172) #11	osgepl1 (ENSLBEG00000028176) #10	fkbp7 (ENSLBEG00000028184) #9	ENSLBEG00000028193 #8	ENSLBEG00000000255 #8	MCM3AP (ENSLBEG00000000276) #19	ybey (ENSLBEG00000000362) #20	usp37 (ENSLBEG00000000389) #21	cnot9 (ENSLBEG00000000729) #22	PLCD4 (ENSLBEG00000000786) #23	ZNF142 (ENSLBEG00000000807) #24	bcs1l (ENSLBEG00000000875) #25	zgc:136333 (ENSLBEG00000000917) #26