Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Percomorphaceae	ANCESTRAL SPECIES	29	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Carangaria	ANCESTRAL SPECIES	12	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.l	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00940000182362	ENSGT00950000183184.a.a.a
Tongue sole	MODERN SPECIES	7	ENSCSEG00000016444 #7	fkbp7 (ENSCSEG00000016425) #8	ENSCSEG00000016419 #9	osgepl1 (ENSCSEG00000016416) #10	alkbh6 (ENSCSEG00000016413) #11	adat3 (ENSCSEG00000016408) #12	ormdl1 (ENSCSEG00000016404) #13	ENSCSEG00000016396 #14	ENSCSEG00000016375 #15	ENSCSEG00000016370 #16	hibch (ENSCSEG00000016344) #17	lss (ENSCSEG00000016324) #18	ENSCSEG00000016295 #19	ybey (ENSCSEG00000016288) #20	usp37 (ENSCSEG00000016207) #21	cnot9 (ENSCSEG00000016169) #22	PLCD4 (ENSCSEG00000016126) #23	ENSCSEG00000016104 #24	ENSCSEG00000016097 #25	ENSCSEG00000016080 #26	ENSCSEG00000016040 #27	ENSCSEG00000016032 #28	itgav (ENSCSEG00000016012) #29	ENSCSEG00000016007 #30	MYLK (ENSCSEG00000015990) #31	ENSCSEG00000015955 #32	ENSCSEG00000015947 #33	ENSCSEG00000015911 #34	ENSCSEG00000015805 #35	ENSCSEG00000015785 #36	ENSCSEG00000015779 #37
Turbot	MODERN SPECIES	5	ENSSMAG00000030365	ENSSMAG00000016431 #7	ENSSMAG00000016384 #8	osgepl1 (ENSSMAG00000016314) #10	ENSSMAG00000016306 #11	adat3 (ENSSMAG00000016304) #12	ormdl1 (ENSSMAG00000016290) #13	pms1 (ENSSMAG00000016259) #15	mstnb (ENSSMAG00000016251) #14	ENSSMAG00000016238 #16	hibch (ENSSMAG00000016217) #17	LSS (ENSSMAG00000017301) #18	ENSSMAG00000017233 #19	YBEY (ENSSMAG00000017209) #20	USP37 (ENSSMAG00000017077) #21	CNOT9 (ENSSMAG00000017049) #22	PLCD4 (ENSSMAG00000017007) #23	ZNF142 (ENSSMAG00000016984) #24	bcs1l (ENSSMAG00000016978)	zgc:136333 (ENSSMAG00000016968)	TNS1 (ENSSMAG00000002630) #26	igfbp5b (ENSSMAG00000022148)	igfbp2b (ENSSMAG00000002850)	slc4a3 (ENSSMAG00000002874)	ENSSMAG00000002910	gulp1a (ENSSMAG00000002959)	ENSSMAG00000003038	ENSSMAG00000034020	ENSSMAG00000003063	ENSSMAG00000033261	ENSSMAG00000026149
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Seriola	ANCESTRAL SPECIES	34	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Greater amberjack	MODERN SPECIES	21	ENSSDUG00000007339 #7	ENSSDUG00000007349 #7	fkbp7 (ENSSDUG00000007385) #8	osgepl1 (ENSSDUG00000007391) #10	alkbh6 (ENSSDUG00000007406) #11	adat3 (ENSSDUG00000007414) #12	ormdl1 (ENSSDUG00000007421) #13	pms1 (ENSSDUG00000007435) #15	mstnb (ENSSDUG00000007459) #14	ENSSDUG00000007475 #16	hibch (ENSSDUG00000007481) #17	lss (ENSSDUG00000007508) #18	MCM3AP (ENSSDUG00000007571) #19	ybey (ENSSDUG00000007610) #20	usp37 (ENSSDUG00000007623) #21	cnot9 (ENSSDUG00000007667) #22	PLCD4 (ENSSDUG00000007711) #23	ZNF142 (ENSSDUG00000007730) #24	bcs1l (ENSSDUG00000007742)	zgc:136333 (ENSSDUG00000007765)	TNS1 (ENSSDUG00000007852) #26	igfbp5b (ENSSDUG00000007969)	igfbp2b (ENSSDUG00000007987)	ENSSDUG00000007994	slc4a3 (ENSSDUG00000008026)	COL5A2 (ENSSDUG00000008163)	gulp1a (ENSSDUG00000008263)	ENSSDUG00000008428	ENSSDUG00000008445	ENSSDUG00000008481	lrrc3 (ENSSDUG00000008494)
Yellowtail amberjack	MODERN SPECIES	3051	ENSSLDG00000015021	ENSSLDG00000015084 #7	fkbp7 (ENSSLDG00000015200) #8	osgepl1 (ENSSLDG00000015220) #10	alkbh6 (ENSSLDG00000015256) #11	adat3 (ENSSLDG00000015266) #12	ormdl1 (ENSSLDG00000015274) #13	pms1 (ENSSLDG00000015291) #15	mstnb (ENSSLDG00000015315) #14	ENSSLDG00000015326 #16	hibch (ENSSLDG00000015336) #17	lss (ENSSLDG00000015382) #18	MCM3AP (ENSSLDG00000016147) #19	ybey (ENSSLDG00000019474) #20	usp37 (ENSSLDG00000019488) #21	cnot9 (ENSSLDG00000019516) #22	PLCD4 (ENSSLDG00000019540) #23	ZNF142 (ENSSLDG00000019564) #24	bcs1l (ENSSLDG00000019606)	zgc:136333 (ENSSLDG00000019620)	TNS1 (ENSSLDG00000019664) #26	ENSSLDG00000019911	igfbp5b (ENSSLDG00000019917)	igfbp2b (ENSSLDG00000019928)	slc4a3 (ENSSLDG00000019942)	ENSSLDG00000019989	gulp1a (ENSSLDG00000020054)	ENSSLDG00000020075	ENSSLDG00000020088	ENSSLDG00000020135	ENSSLDG00000020139
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	216	ENSLCAG00010001401	ENSLCAG00010000783 #7	ENSLCAG00010000380 #8	osgepl1 (ENSLCAG00010000367) #10	alkbh6 (ENSLCAG00010000357) #11	adat3 (ENSLCAG00010000350) #12	ormdl1 (ENSLCAG00010000333) #13	pms1 (ENSLCAG00010000283) #15	mstnb (ENSLCAG00010022821) #14	ENSLCAG00010022812 #16	hibch (ENSLCAG00010022801) #17	lss (ENSLCAG00010022762) #18	ENSLCAG00010022745 #19	ybey (ENSLCAG00010022743) #20	usp37 (ENSLCAG00010022741) #21	cnot9 (ENSLCAG00010022735) #22	PLCD4 (ENSLCAG00010022517) #23	ENSLCAG00010022468 #24	ENSLCAG00010022467 #24	bcs1l (ENSLCAG00010022465)	zgc:136333 (ENSLCAG00010022461)	TNS1 (ENSLCAG00010022355) #26	igfbp5b (ENSLCAG00010022316)	igfbp2b (ENSLCAG00010022310)	ENSLCAG00010022307	slc4a3 (ENSLCAG00010022227)
Barramundi perch	MODERN SPECIES	1799																cnot9 (ENSLCAG00010021784) #22
Anabantaria	ANCESTRAL SPECIES	14	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Climbing perch	MODERN SPECIES	12	ENSATEG00000008730	ENSATEG00000008815	ENSATEG00000008833 #7	ENSATEG00000008852 #8	osgepl1 (ENSATEG00000008881) #10	ENSATEG00000008859 #11	adat3 (ENSATEG00000008909) #12	ormdl1 (ENSATEG00000008911) #13	pms1 (ENSATEG00000008961) #15	mstnb (ENSATEG00000008968) #14	ENSATEG00000008989 #16	hibch (ENSATEG00000008995) #17	ENSATEG00000009009 #18	ENSATEG00000009098 #20	USP37 (ENSATEG00000009106) #21	CNOT9 (ENSATEG00000009188) #22	PLCD4 (ENSATEG00000009217) #23	ZNF142 (ENSATEG00000009234) #24	bcs1l (ENSATEG00000009249)	zgc:136333 (ENSATEG00000009256)	TNS1 (ENSATEG00000009288) #26	igfbp5b (ENSATEG00000009460)	igfbp2b (ENSATEG00000009467)	ENSATEG00000027372	slc4a3 (ENSATEG00000009496)	ENSATEG00000009545	gulp1a (ENSATEG00000009652)	ENSATEG00000009708	ENSATEG00000009722	ENSATEG00000009777	ENSATEG00000009800
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000011038	ENSBSLG00000011023	ENSBSLG00000011010	osgepl1 (ENSBSLG00000010975) #10	adat3 (ENSBSLG00000010966) #12	ormdl1 (ENSBSLG00000010956) #13	pms1 (ENSBSLG00000010729) #15	mstnb (ENSBSLG00000010624) #14	ENSBSLG00000010463 #16	ENSBSLG00000010461	hibch (ENSBSLG00000009802) #17	lss (ENSBSLG00000009140) #18	ENSBSLG00000008957 #19	ybey (ENSBSLG00000008603) #20	usp37 (ENSBSLG00000007926) #21	cnot9 (ENSBSLG00000007738) #22	PLCD4 (ENSBSLG00000006962) #23	maip1 (ENSBSLG00000006940)	maip1 (ENSBSLG00000006922)	maip1 (ENSBSLG00000006900)	tyw5 (ENSBSLG00000006858)	ENSBSLG00000006848	ENSBSLG00000006516	RAB17 (ENSBSLG00000006286)	MLPH (ENSBSLG00000005933)	ENSBSLG00000005925	COL6A3 (ENSBSLG00000005154)	cops8 (ENSBSLG00000004929)	ENSBSLG00000004877	ENSBSLG00000026090	ENSBSLG00000025939
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000010625 #7	ENSMAMG00000010685	ENSMAMG00000025028 #8	osgepl1 (ENSMAMG00000010694) #10	ENSMAMG00000010698 #11	adat3 (ENSMAMG00000010706) #12	ormdl1 (ENSMAMG00000010710) #13	pms1 (ENSMAMG00000010717) #15	mstnb (ENSMAMG00000010725) #14	ENSMAMG00000010733 #16	hibch (ENSMAMG00000010741) #17	LSS (ENSMAMG00000010753) #18	ENSMAMG00000010786 #19	YBEY (ENSMAMG00000010832) #20	USP37 (ENSMAMG00000010862) #21	CNOT9 (ENSMAMG00000011021) #22	PLCD4 (ENSMAMG00000011046) #23	ZNF142 (ENSMAMG00000011171) #24	bcs1l (ENSMAMG00000011182)	zgc:136333 (ENSMAMG00000011191)	TNS1 (ENSMAMG00000011244) #26	igfbp5b (ENSMAMG00000011353)	igfbp2b (ENSMAMG00000024703)	slc4a3 (ENSMAMG00000011375)	COL5A2 (ENSMAMG00000011468)	gulp1a (ENSMAMG00000011545)	ENSMAMG00000026701	ENSMAMG00000028000	FAM171B (ENSMAMG00000011601)	lrrc3 (ENSMAMG00000011617)	pcbp3 (ENSMAMG00000011620)
Eupercaria	ANCESTRAL SPECIES	25	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Ballan wrasse	MODERN SPECIES	55	lss (ENSLBEG00000028041) #18	hibch (ENSLBEG00000028083) #17	ENSLBEG00000028129 #16	mstnb (ENSLBEG00000028147) #14	pms1 (ENSLBEG00000028137) #15	ormdl1 (ENSLBEG00000028157) #13	adat3 (ENSLBEG00000028168) #12	alkbh6 (ENSLBEG00000028172) #11	osgepl1 (ENSLBEG00000028176) #10	fkbp7 (ENSLBEG00000028184) #8	ENSLBEG00000028193 #7	ENSLBEG00000000255 #7	MCM3AP (ENSLBEG00000000276) #19	ybey (ENSLBEG00000000362) #20	usp37 (ENSLBEG00000000389) #21	cnot9 (ENSLBEG00000000729) #22	PLCD4 (ENSLBEG00000000786) #23	ZNF142 (ENSLBEG00000000807) #24	bcs1l (ENSLBEG00000000875)	zgc:136333 (ENSLBEG00000000917)
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
European seabass	MODERN SPECIES	5	ENSDLAG00005022435 #8	osgepl1 (ENSDLAG00005022441) #10	adat3 (ENSDLAG00005022449) #12	ENSDLAG00005022445 #11	ormdl1 (ENSDLAG00005027751) #13	pms1 (ENSDLAG00005022460) #15	mstnb (ENSDLAG00005022521) #14	ENSDLAG00005022536 #16	hibch (ENSDLAG00005022541) #17	LSS (ENSDLAG00005022621) #18	ENSDLAG00005022735	ENSDLAG00005022739	ENSDLAG00005022744 #19	YBEY (ENSDLAG00005034841) #20	USP37 (ENSDLAG00005022800) #21	CNOT9 (ENSDLAG00005022857) #22	PLCD4 (ENSDLAG00005022885) #23	ZNF142 (ENSDLAG00005023256) #24	zgc:136333 (ENSDLAG00005023265)	TNS1 (ENSDLAG00005023305) #26	igfbp5b (ENSDLAG00005024114)	igfbp2b (ENSDLAG00005024118)	slc4a3 (ENSDLAG00005024195)	ENSDLAG00005024788	gulp1a (ENSDLAG00005004339)	ENSDLAG00005033365	ENSDLAG00005004586	ENSDLAG00005005708	lrrc3 (ENSDLAG00005031007)	pcbp3 (ENSDLAG00005005870)	ENSDLAG00005006140
Large yellow croaker	MODERN SPECIES		ENSLCRG00005014720	hdac4 (ENSLCRG00005013772)	twist2 (ENSLCRG00005013760)	ENSLCRG00005013759	asb1 (ENSLCRG00005013758)	traf3ip1 (ENSLCRG00005013756)	ADARB1 (ENSLCRG00005013696)	ENSLCRG00005013693	ENSLCRG00005013688	ENSLCRG00005013687 ##28	zgc:162396 (ENSLCRG00005013685)	zgc:162780 (ENSLCRG00005013684)	ENSLCRG00005013683 #19	ybey (ENSLCRG00005013682) #20	usp37 (ENSLCRG00005013676) #21	cnot9 (ENSLCRG00005013674) #22	PLCD4 (ENSLCRG00005013664) #23	ZNF142 (ENSLCRG00005013660) #24	bcs1l (ENSLCRG00005013659)	CYP27A1 (ENSLCRG00005013658)	TNS1 (ENSLCRG00005012097) #26	igfbp5b (ENSLCRG00005012082)	igfbp2b (ENSLCRG00005012081)	slc4a3 (ENSLCRG00005009948)	COL5A2 (ENSLCRG00005007993)	gulp1a (ENSLCRG00005007966)	ENSLCRG00005007962	ENSLCRG00005007405	ENSLCRG00005007392	lrrc3 (ENSLCRG00005007390)	pcbp3 (ENSLCRG00005007381)
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010009144	ENSSAUG00010004954 #7	fkbp7 (ENSSAUG00010004880) #8	osgepl1 (ENSSAUG00010004873) #10	alkbh6 (ENSSAUG00010004870) #11	adat3 (ENSSAUG00010004867) #12	ormdl1 (ENSSAUG00010004864) #13	pms1 (ENSSAUG00010004800) #15	mstnb (ENSSAUG00010004791) #14	ENSSAUG00010004790 #16	hibch (ENSSAUG00010004770) #17	lss (ENSSAUG00010004683) #18	ENSSAUG00010004668 #19	ybey (ENSSAUG00010004664) #20	usp37 (ENSSAUG00010004648) #21	cnot9 (ENSSAUG00010004638) #22	PLCD4 (ENSSAUG00010004216) #23	ZNF142 (ENSSAUG00010004108) #24	bcs1l (ENSSAUG00010004068)	zgc:136333 (ENSSAUG00010015642)	TNS1 (ENSSAUG00010015615) #26	igfbp5b (ENSSAUG00010015605)	igfbp2b (ENSSAUG00010015599)	slc4a3 (ENSSAUG00010015089)	COL5A2 (ENSSAUG00010014375)	gulp1a (ENSSAUG00010014239)	ENSSAUG00010014232	ENSSAUG00010014112	ENSSAUG00010014107	FAM171B (ENSSAUG00010014104)	lrrc3 (ENSSAUG00010014103)
Perciformes	ANCESTRAL SPECIES	23	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000021571	ENSCGOG00000021597 #7	fkbp7 (ENSCGOG00000021818) #8	osgepl1 (ENSCGOG00000021820) #10	alkbh6 (ENSCGOG00000021822) #11	pms1 (ENSCGOG00000021826) #15	adat3 (ENSCGOG00000021904) #12	ormdl1 (ENSCGOG00000021905) #13	mstnb (ENSCGOG00000021916) #14	ENSCGOG00000021934 #16	hibch (ENSCGOG00000021938) #17	lss (ENSCGOG00000021990) #18	ENSCGOG00000022398 #19	ybey (ENSCGOG00000022413) #20	usp37 (ENSCGOG00000022416) #21	cnot9 (ENSCGOG00000022431) #22	PLCD4 (ENSCGOG00000022467) #23	ZNF142 (ENSCGOG00000023002) #24	bcs1l (ENSCGOG00000023004)	zgc:136333 (ENSCGOG00000023008)	TNS1 (ENSCGOG00000023029) #26	igfbp5b (ENSCGOG00000023194)	igfbp2b (ENSCGOG00000023204)	slc4a3 (ENSCGOG00000023208)	COL5A2 (ENSCGOG00000023213)	gulp1a (ENSCGOG00000023238)	ENSCGOG00000023244	ENSCGOG00000023247	ENSCGOG00000023279	ENSCGOG00000023443	lrrc3 (ENSCGOG00000012897)
Pike perch	MODERN SPECIES	191	ENSSLUG00000019736	ENSSLUG00000018646	fkbp7 (ENSSLUG00000018593) #8	osgepl1 (ENSSLUG00000018585) #10	alkbh6 (ENSSLUG00000018581) #11	adat3 (ENSSLUG00000018579) #12	ormdl1 (ENSSLUG00000018570) #13	pms1 (ENSSLUG00000018218) #15	mstnb (ENSSLUG00000018180) #14	ENSSLUG00000018175 #16	hibch (ENSSLUG00000017666) #17	lss (ENSSLUG00000016140) #18	ENSSLUG00000015955 #19	ybey (ENSSLUG00000015934) #20	usp37 (ENSSLUG00000015895) #21	cnot9 (ENSSLUG00000015860) #22	PLCD4 (ENSSLUG00000015812) #23	ENSSLUG00000015766	ENSSLUG00000015731 #23
Cottioidei	ANCESTRAL SPECIES	14	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Stickleback	MODERN SPECIES	16	ENSGACG00000002673	ENSGACG00000002657 #7	fkbp7 (ENSGACG00000002654) #8	osgepl1 (ENSGACG00000002648) #10	alkbh6 (ENSGACG00000002647) #11	adat3 (ENSGACG00000002645) #12	ormdl1 (ENSGACG00000002642) #13	pms1 (ENSGACG00000002634) #15	mstnb (ENSGACG00000002630) #14	ENSGACG00000002627	hibch (ENSGACG00000002609) #17	lss (ENSGACG00000002592) #18	ENSGACG00000002570 #19	ybey (ENSGACG00000002567) #20	usp37 (ENSGACG00000002557) #21	cnot9 (ENSGACG00000002543) #22	PLCD4 (ENSGACG00000002540) #23	ZNF142 (ENSGACG00000002534) #24	zgc:136333 (ENSGACG00000002514)	TNS1 (ENSGACG00000002511) #26	igfbp5b (ENSGACG00000002508)	igfbp2b (ENSGACG00000002506)	slc4a3 (ENSGACG00000002501)	COL5A2 (ENSGACG00000002409)	gulp1a (ENSGACG00000002401)	ENSGACG00000002393	ENSGACG00000002387	gjc4b (ENSGACG00000002384)	CXCR2 (ENSGACG00000002380)	faima (ENSGACG00000002376)	ENSGACG00000002367
Lumpfish	MODERN SPECIES	13	ENSCLMG00005009983	ENSCLMG00005009982	SYMPK (ENSCLMG00005004930)	SLC35F5 (ENSCLMG00005004215)	ENSCLMG00005004213	gpr39 (ENSCLMG00005004212)	LYPD1 (ENSCLMG00005004211)	ftcdnl1 (ENSCLMG00005019254)	ENSCLMG00005019253	ENSCLMG00005019250	tfg (ENSCLMG00005019249)	jagn1a (ENSCLMG00005019248)	ENSCLMG00005019247 #19	ybey (ENSCLMG00005019246) #20	usp37 (ENSCLMG00005019240) #21	CNOT9 (ENSCLMG00005019237) #22	PLCD4 (ENSCLMG00005018795) #23	ZNF142 (ENSCLMG00005018790) #24	bcs1l (ENSCLMG00005018789)	zgc:136333 (ENSCLMG00005018672)	igfbp5b (ENSCLMG00005018668)	ENSCLMG00005018667	slc4a3 (ENSCLMG00005018665)	COL5A2 (ENSCLMG00005018662)	gulp1a (ENSCLMG00005018660)	ENSCLMG00005018659	ENSCLMG00005017855	hspe1 (ENSCLMG00005017849)	hspd1 (ENSCLMG00005017848)	coq10b (ENSCLMG00005017847)	SF3B1 (ENSCLMG00005017761)
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Oryzias	ANCESTRAL SPECIES	10	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Oryzias_a	ANCESTRAL SPECIES	45	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000161939	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Chinese medaka	MODERN SPECIES	703	GLS (ENSOSIG00000012852) #7	fkbp7 (ENSOSIG00000012807) #8	DNAI2 (ENSOSIG00000012796)	osgepl1 (ENSOSIG00000012793) #10	alkbh6 (ENSOSIG00000012789) #11	adat3 (ENSOSIG00000012786) #12	ormdl1 (ENSOSIG00000012784) #13	pms1 (ENSOSIG00000012727) #15	mstnb (ENSOSIG00000012721) #14	ENSOSIG00000012720 #16	hibch (ENSOSIG00000012281) #17	lss (ENSOSIG00000012228) #18	ENSOSIG00000012142 #19	ybey (ENSOSIG00000012136) #20	usp37 (ENSOSIG00000012075) #21	cnot9 (ENSOSIG00000012071) #22	PLCD4 (ENSOSIG00000010959) #23	ZNF142 (ENSOSIG00000010957) #24	bcs1l (ENSOSIG00000010956)	zgc:136333 (ENSOSIG00000010929)	ENSOSIG00000010923 ##26	TNS1 (ENSOSIG00000010884) #26
Japanese Medaka HdrR	MODERN SPECIES	13	GLS (ENSORLG00000015157) #7	fkbp7 (ENSORLG00000015126) #8	ENSORLG00000024865	alkbh6 (ENSORLG00000015103) #11	osgepl1 (ENSORLG00000015117) #10	ormdl1 (ENSORLG00000015100) #13	pms1 (ENSORLG00000015090) #15	mstnb (ENSORLG00000015057) #14	ENSORLG00000015048 #16	hibch (ENSORLG00000015037) #17	LSS (ENSORLG00000015003) #18	lss (ENSORLG00000028452) #18	MCM3AP (ENSORLG00000014980) #19	ybey (ENSORLG00000023922) #20	usp37 (ENSORLG00000014960) #21	cnot9 (ENSORLG00000014925) #22	PLCD4 (ENSORLG00000014901) #23	ZNF142 (ENSORLG00000014849) #24	bcs1l (ENSORLG00000014823)	zgc:136333 (ENSORLG00000014811)	ENSORLG00000028136	TNS1 (ENSORLG00000014781) #26	ENSORLG00000025476	ENSORLG00000022632	igfbp5b (ENSORLG00000030103)	igfbp2b (ENSORLG00000014695)	slc4a3 (ENSORLG00000030477)	COL5A2 (ENSORLG00000014658)	ENSORLG00000027152	gulp1a (ENSORLG00000014478)	ENSORLG00000025169
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00950000182996.b.b.c.b.h.b.a	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Indian medaka	MODERN SPECIES	18	ENSOMEG00000022183 #7	fkbp7 (ENSOMEG00000022136) #8	osgepl1 (ENSOMEG00000022115) #10	alkbh6 (ENSOMEG00000022075) #11	ormdl1 (ENSOMEG00000022066) #13	adat3 (ENSOMEG00000022041) #12	pms1 (ENSOMEG00000022030) #15	mstnb (ENSOMEG00000021961) #14	ENSOMEG00000021937 #16	hibch (ENSOMEG00000021921) #17	lss (ENSOMEG00000021872) #18	lss (ENSOMEG00000021845) #18	ENSOMEG00000021796 #19	ybey (ENSOMEG00000021714) #20	usp37 (ENSOMEG00000021685) #21	cnot9 (ENSOMEG00000021642) #22	PLCD4 (ENSOMEG00000000898) #23	ZNF142 (ENSOMEG00000000914) #24	bcs1l (ENSOMEG00000021530)	zgc:136333 (ENSOMEG00000021503)	ENSOMEG00000021450	TNS1 (ENSOMEG00000021378) #26	igfbp5b (ENSOMEG00000020658)	igfbp2b (ENSOMEG00000020645)	igfbp2b (ENSOMEG00000020624)	slc4a3 (ENSOMEG00000020610)	COL5A2 (ENSOMEG00000020553)	gulp1a (ENSOMEG00000020451)	ENSOMEG00000020328	ENSOMEG00000020315	ENSOMEG00000020290
Javanese ricefish	MODERN SPECIES	13	ENSOJAG00000022473 #7	fkbp7 (ENSOJAG00000022365) #8	osgepl1 (ENSOJAG00000022351) #10	alkbh6 (ENSOJAG00000022343) #11	adat3 (ENSOJAG00000022338) #12	ormdl1 (ENSOJAG00000022329) #13	pms1 (ENSOJAG00000022261) #15	mstnb (ENSOJAG00000022229) #14	ENSOJAG00000022224 #16	hibch (ENSOJAG00000022179) #17	lss (ENSOJAG00000021730) #18	ENSOJAG00000021686	MCM3AP (ENSOJAG00000021610) #19	ybey (ENSOJAG00000021589) #20	usp37 (ENSOJAG00000021547) #21	cnot9 (ENSOJAG00000021505) #22	PLCD4 (ENSOJAG00000021256) #23	ZNF142 (ENSOJAG00000021212) #24	bcs1l (ENSOJAG00000021174)	zgc:136333 (ENSOJAG00000021136)	ENSOJAG00000021120	TNS1 (ENSOJAG00000020938) #26	igfbp5b (ENSOJAG00000020921)	igfbp2b (ENSOJAG00000020918)	ENSOJAG00000020910	slc4a3 (ENSOJAG00000019855)	ENSOJAG00000019263	gulp1a (ENSOJAG00000019141)	ENSOJAG00000019121	ENSOJAG00000018181	ENSOJAG00000018059
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Aplocheiloidei	ANCESTRAL SPECIES	241													ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26
Mangrove rivulus	MODERN SPECIES	136	lrrc3 (ENSKMAG00000018588)	pcbp3 (ENSKMAG00000018530)	ENSKMAG00000018460	ENSKMAG00000018283	CTDSP1 (ENSKMAG00000018212)	ENSKMAG00000018133	ENSKMAG00000018105	nabp1a (ENSKMAG00000018072)	cavin2a (ENSKMAG00000018058)	tmeff2a (ENSKMAG00000018018)	ENSKMAG00000018000	slc39a10 (ENSKMAG00000017958)	ENSKMAG00000017908 #19	ybey (ENSKMAG00000017890) #20	usp37 (ENSKMAG00000017787) #21	cnot9 (ENSKMAG00000017715) #22	PLCD4 (ENSKMAG00000017684) #23	ZNF142 (ENSKMAG00000017660) #24	bcs1l (ENSKMAG00000017637)	zgc:136333 (ENSKMAG00000017556)	ENSKMAG00000017529	ENSKMAG00000017511
Turquoise killifish	MODERN SPECIES	408													ENSNFUG00015017543 #19	ybey (ENSNFUG00015017595) #20	usp37 (ENSNFUG00015017626) #21	RQCD1 (ENSNFUG00015017817) #22	PLCD4 (ENSNFUG00015017897) #23	ZNF142 (ENSNFUG00015019936) #24
Cyprinodontoidei	ANCESTRAL SPECIES	30	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805
Poeciliinae	ANCESTRAL SPECIES	29	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Poecilia	ANCESTRAL SPECIES	46	ENSGT00940000153744.A.e.a #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B.i #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
NAME_6	ANCESTRAL SPECIES	68	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b.c #14	ENSGT00940000165813.b.d #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.B.h	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B.i #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a
Amazon molly	MODERN SPECIES	299				ENSPFOG00000011795	pms1 (ENSPFOG00000011839) #15	mstnb (ENSPFOG00000021946) #14	mstnb (ENSPFOG00000012130) #14	ddt (ENSPFOG00000012202)	gstt1b (ENSPFOG00000012223)	hibch (ENSPFOG00000012275) #17	lss (ENSPFOG00000012442) #18	ENSPFOG00000012841	ENSPFOG00000012860 #19	ybey (ENSPFOG00000013092) #20	usp37 (ENSPFOG00000013121) #21	cnot9 (ENSPFOG00000013296) #22	PLCD4 (ENSPFOG00000013304) #23	ZNF142 (ENSPFOG00000013660) #24	bcs1l (ENSPFOG00000013687)	CYP27A1 (ENSPFOG00000024088)	ENSPFOG00000013767	TNS1 (ENSPFOG00000013948) #26	igfbp5b (ENSPFOG00000014472)	igfbp2b (ENSPFOG00000014498)	slc4a3 (ENSPFOG00000014529)	ENSPFOG00000014959	gulp1a (ENSPFOG00000015272)	ENSPFOG00000015315	ENSPFOG00000015333	ENSPFOG00000015399	lrrc3 (ENSPFOG00000020156)
Sailfin molly	MODERN SPECIES	142										ENSPLAG00000021596	ENSPLAG00000021589	ENSPLAG00000021586	ENSPLAG00000021578 #19	ybey (ENSPLAG00000021550) #20	usp37 (ENSPLAG00000021547) #21	cnot9 (ENSPLAG00000021539) #22	PLCD4 (ENSPLAG00000021512) #23	ZNF142 (ENSPLAG00000021487) #24	bcs1l (ENSPLAG00000021477)	CYP27A1 (ENSPLAG00000021467)	CYP27A1 (ENSPLAG00000021420)	TNS1 (ENSPLAG00000021354) #26
Guppy	MODERN SPECIES	450	alkbh6 (ENSPREG00000001145) #11	adat3 (ENSPREG00000001135) #12	ormdl1 (ENSPREG00000001117) #13	pms1 (ENSPREG00000001098) #15	mstnb (ENSPREG00000001076) #14	ddt (ENSPREG00000000981)	gstt1b (ENSPREG00000000954)	ENSPREG00000000948 #16	hibch (ENSPREG00000000941) #17	lss (ENSPREG00000000862) #18	ENSPREG00000000852	ENSPREG00000000836	ENSPREG00000000812 #19	ybey (ENSPREG00000000796) #20	usp37 (ENSPREG00000000789) #21	cnot9 (ENSPREG00000000758) #22	PLCD4 (ENSPREG00000000734) #23	ZNF142 (ENSPREG00000000722) #24	bcs1l (ENSPREG00000000620)	CYP27A1 (ENSPREG00000000548)	ENSPREG00000000541	ENSPREG00000000540 #26	ENSPREG00000020879 #26	igfbp5b (ENSPREG00000020870)	igfbp2b (ENSPREG00000020866)	slc4a3 (ENSPREG00000020828)	COL5A2 (ENSPREG00000020747)	gulp1a (ENSPREG00000020679)	ENSPREG00000020656	ENSPREG00000020639	ENSPREG00000020624
Platyfish	MODERN SPECIES	21	wdr75 (ENSXMAG00000005811)	ENSXMAG00000022033	ENSXMAG00000005845	ENSXMAG00000005850 #7	fkbp7 (ENSXMAG00000005881) #8	osgepl1 (ENSXMAG00000005885) #10	ormdl1 (ENSXMAG00000005900) #13	adat3 (ENSXMAG00000005897) #12	pms1 (ENSXMAG00000005904) #15	ENSXMAG00000026653 #16	hibch (ENSXMAG00000006425) #17	lss (ENSXMAG00000006445) #18	ENSXMAG00000015028 #19	ybey (ENSXMAG00000015012) #20	usp37 (ENSXMAG00000014971) #21	cnot9 (ENSXMAG00000006474) #22	PLCD4 (ENSXMAG00000006488) #23	ZNF142 (ENSXMAG00000024729) #24	bcs1l (ENSXMAG00000006514)	CYP27A1 (ENSXMAG00000006540)	ENSXMAG00000006529	ENSXMAG00000028776	TNS1 (ENSXMAG00000009264) #26	ENSXMAG00000028950	ENSXMAG00000021442	ENSXMAG00000026794	igfbp5b (ENSXMAG00000006558)	igfbp2b (ENSXMAG00000026555)	slc4a3 (ENSXMAG00000006572)	ENSXMAG00000028362	gulp1a (ENSXMAG00000007102)
NAME_4	ANCESTRAL SPECIES	78	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570.f #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Sheepshead minnow	MODERN SPECIES	257								ENSCVAG00000022778	ENSCVAG00000022748 #16	hibch (ENSCVAG00000022738) #17	lss (ENSCVAG00000022724) #18	ENSCVAG00000022671	ENSCVAG00000022653 #19	ybey (ENSCVAG00000022642) #20	usp37 (ENSCVAG00000022633) #21	cnot9 (ENSCVAG00000022621) #22	PLCD4 (ENSCVAG00000022607) #23	ZNF142 (ENSCVAG00000022595) #24	bcs1l (ENSCVAG00000022527)	CYP27A1 (ENSCVAG00000022499)	ENSCVAG00000022455	NQO2 (ENSCVAG00000022450)	TNS1 (ENSCVAG00000022436) #26	igfbp5b (ENSCVAG00000022402)	igfbp2b (ENSCVAG00000022399)	ENSCVAG00000022395	slc4a3 (ENSCVAG00000022384)	COL5A2 (ENSCVAG00000022151)	gulp1a (ENSCVAG00000022087)	ENSCVAG00000022015	ENSCVAG00000022001
Mummichog	MODERN SPECIES	1082													ENSFHEG00000001113 #19	ybey (ENSFHEG00000001108) #20	usp37 (ENSFHEG00000001100) #21	cnot9 (ENSFHEG00000001097) #22
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00950000183184.a.a.a
Pomacentridae	ANCESTRAL SPECIES	51	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00940000182362
Pomacentridae_A	ANCESTRAL SPECIES	52	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805	ENSGT00940000182362
Amphiprion	ANCESTRAL SPECIES	52	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B #26	ENSGT00940000182580	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	131																cnot9 (ENSAOCG00000007672) #22	PLCD4 (ENSAOCG00000007641) #23	ZNF142 (ENSAOCG00000007625) #24	bcs1l (ENSAOCG00000007615)	CYP27A1 (ENSAOCG00000007578)
Clown anemonefish	MODERN SPECIES	2268										ENSAOCG00000017191 #16	hibch (ENSAOCG00000017204) #17	lss (ENSAOCG00000017280) #18	ENSAOCG00000017340 #19	ybey (ENSAOCG00000017346) #20	usp37 (ENSAOCG00000017372) #21	cnot9 (ENSAOCG00000017401) #22	PLCD4 (ENSAOCG00000017435) #23
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000003821	ENSAPEG00000003850 #7	fkbp7 (ENSAPEG00000003880) #8	osgepl1 (ENSAPEG00000003890) #10	alkbh6 (ENSAPEG00000003934) #11	ormdl1 (ENSAPEG00000003961) #13	adat3 (ENSAPEG00000003977) #12	pms1 (ENSAPEG00000003991) #15	mstnb (ENSAPEG00000004012) #14	ENSAPEG00000004029 #16	hibch (ENSAPEG00000004045) #17	lss (ENSAPEG00000004092) #18	ENSAPEG00000004174 #19	ybey (ENSAPEG00000004197) #20	usp37 (ENSAPEG00000004235) #21	cnot9 (ENSAPEG00000004365) #22	PLCD4 (ENSAPEG00000004394) #23	ZNF142 (ENSAPEG00000004469) #24	bcs1l (ENSAPEG00000004528)	zgc:136333 (ENSAPEG00000004557)	TNS1 (ENSAPEG00000004583) #26	ENSAPEG00000004603	ENSAPEG00000004619	igfbp5b (ENSAPEG00000004632)	igfbp2b (ENSAPEG00000004641)	slc4a3 (ENSAPEG00000004673)	ENSAPEG00000004861	gulp1a (ENSAPEG00000004993)	ENSAPEG00000005066	ENSAPEG00000005085	ENSAPEG00000005152
Spiny chromis	MODERN SPECIES	2732													ENSAPOG00000016059 #19	ybey (ENSAPOG00000016069) #20	usp37 (ENSAPOG00000016082) #21	cnot9 (ENSAPOG00000016119) #22
Bicolor damselfish	MODERN SPECIES	1960										ENSSPAG00000015636 #16	hibch (ENSSPAG00000015644) #17	lss (ENSSPAG00000015689) #18	ENSSPAG00000015778 #19	ybey (ENSSPAG00000015824) #20	usp37 (ENSSPAG00000015839) #21	cnot9 (ENSSPAG00000015881) #22	PLCD4 (ENSSPAG00000015928) #23	ZNF142 (ENSSPAG00000016019) #24
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192
Midas cichlid	MODERN SPECIES	33				bcs1l (ENSACIG00000004834)	ZNF142 (ENSACIG00000004854) #24	PLCD4 (ENSACIG00000004893) #23	ormdl1 (ENSACIG00000004924) #13	pms1 (ENSACIG00000004933) #15	mstnb (ENSACIG00000005038) #14	ENSACIG00000005048 #16	hibch (ENSACIG00000005054) #17	lss (ENSACIG00000005086) #18	ENSACIG00000005137 #19	ybey (ENSACIG00000005308) #20	usp37 (ENSACIG00000005323) #21	cnot9 (ENSACIG00000005487) #22	zgc:136439 (ENSACIG00000005506)	ENSACIG00000005548	ENSACIG00000005575	slc40a1 (ENSACIG00000005588)	wdr75 (ENSACIG00000005615)	STAT4 (ENSACIG00000005777)	ENSACIG00000005855	ENSACIG00000006253	ENSACIG00000006272 #7	fkbp7 (ENSACIG00000006305) #8	ENSACIG00000006316 #8	osgepl1 (ENSACIG00000006320) #10	alkbh6 (ENSACIG00000006337) #11	adat3 (ENSACIG00000006347) #12	SYMPK (ENSACIG00000006357)
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192
Nile tilapia	MODERN SPECIES	7	zgc:136333 (ENSONIG00000007177)	ENSONIG00000032736	bcs1l (ENSONIG00000007176)	ZNF142 (ENSONIG00000007174) #24	PLCD4 (ENSONIG00000007170) #23	ormdl1 (ENSONIG00000018245) #13	pms1 (ENSONIG00000007164) #15	mstnb (ENSONIG00000007163) #14	ENSONIG00000020754 #16	hibch (ENSONIG00000007161) #17	ENSONIG00000041682	lss (ENSONIG00000016840) #18	ENSONIG00000016836 #19	ybey (ENSONIG00000042756) #20	usp37 (ENSONIG00000016831) #21	cnot9 (ENSONIG00000016830) #22	zgc:136439 (ENSONIG00000038295)	asnsd1 (ENSONIG00000016829)	ENSONIG00000038814	slc40a1 (ENSONIG00000032283)	wdr75 (ENSONIG00000016827)	STAT4 (ENSONIG00000016817)	ENSONIG00000040122	ENSONIG00000016812 #7	fkbp7 (ENSONIG00000016810) #8	osgepl1 (ENSONIG00000016808) #10	alkbh6 (ENSONIG00000035409) #11	adat3 (ENSONIG00000021155) #12	SYMPK (ENSONIG00000016802)	SLC35F5 (ENSONIG00000016798)	gpr39 (ENSONIG00000016797)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Burton s mouthbrooder	MODERN SPECIES	544							ormdl1 (ENSHBUG00000022540) #13	pms1 (ENSHBUG00000022546) #15	mstnb (ENSHBUG00000022560) #14	ENSHBUG00000022570 #16	hibch (ENSHBUG00000022595) #17	lss (ENSHBUG00000000696) #18	ENSHBUG00000022726 #19	ybey (ENSHBUG00000022755) #20	usp37 (ENSHBUG00000022775) #21	cnot9 (ENSHBUG00000022819) #22	zgc:136439 (ENSHBUG00000022876)	asnsd1 (ENSHBUG00000022898)	slc40a1 (ENSHBUG00000022927)	wdr75 (ENSHBUG00000023108)	STAT4 (ENSHBUG00000000711)	ENSHBUG00000023262	ENSHBUG00000023387 #7	fkbp7 (ENSHBUG00000023447) #8	osgepl1 (ENSHBUG00000023523) #10	alkbh6 (ENSHBUG00000023541) #11	adat3 (ENSHBUG00000023550) #12	SYMPK (ENSHBUG00000023564)	SLC35F5 (ENSHBUG00000023580)	ENSHBUG00000023593	gpr39 (ENSHBUG00000023600)
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
P. nyererei	MODERN SPECIES	366	igfbp5b (ENSPNYG00000012598)	TNS1 (ENSPNYG00000012484) #26	zgc:136333 (ENSPNYG00000012405)	bcs1l (ENSPNYG00000012374)	ZNF142 (ENSPNYG00000012329) #24	PLCD4 (ENSPNYG00000012295) #23	ormdl1 (ENSPNYG00000012277) #13	pms1 (ENSPNYG00000012259) #15	mstnb (ENSPNYG00000012235) #14	ENSPNYG00000012220 #16	hibch (ENSPNYG00000012136) #17	lss (ENSPNYG00000011989) #18	ENSPNYG00000011931 #19	ybey (ENSPNYG00000011909) #20	usp37 (ENSPNYG00000011888) #21	cnot9 (ENSPNYG00000011857) #22	zgc:136439 (ENSPNYG00000011840)	asnsd1 (ENSPNYG00000011819)	slc40a1 (ENSPNYG00000011792)	wdr75 (ENSPNYG00000011767)	STAT4 (ENSPNYG00000011623)	ENSPNYG00000011587	ENSPNYG00000011543 #7	fkbp7 (ENSPNYG00000011516) #8	osgepl1 (ENSPNYG00000011500) #10	alkbh6 (ENSPNYG00000011487) #11	adat3 (ENSPNYG00000011478) #12	SYMPK (ENSPNYG00000011455)	SLC35F5 (ENSPNYG00000011426)	ENSPNYG00000011420	gpr39 (ENSPNYG00000011407)
Haplochromini_B	ANCESTRAL SPECIES	39	ENSGT00940000155890.a.a	ENSGT00940000155400.B #26	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #15	ENSGT00940000165813.b #14	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b #7	ENSGT00940000159964 #8	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Zebra mbuna	MODERN SPECIES	1098	TNS1 (ENSMZEG00005014600) #26	ENSMZEG00005014583 #26	zgc:136333 (ENSMZEG00005014558)	bcs1l (ENSMZEG00005014547)	ZNF142 (ENSMZEG00005014543) #24	PLCD4 (ENSMZEG00005014505) #23	ormdl1 (ENSMZEG00005014486) #13	pms1 (ENSMZEG00005014474) #15	mstnb (ENSMZEG00005014466) #14	ENSMZEG00005014463 #16	hibch (ENSMZEG00005014450) #17	lss (ENSMZEG00005014423) #18	ENSMZEG00005014406 #19	ybey (ENSMZEG00005014396) #20	usp37 (ENSMZEG00005014377) #21	cnot9 (ENSMZEG00005014365) #22	zgc:136439 (ENSMZEG00005014351)	asnsd1 (ENSMZEG00005014348)	slc40a1 (ENSMZEG00005014335)	wdr75 (ENSMZEG00005014322)	STAT4 (ENSMZEG00005014301)	ENSMZEG00005014277	ENSMZEG00005014227 #7	fkbp7 (ENSMZEG00005014215) #8	osgepl1 (ENSMZEG00005014198) #10	alkbh6 (ENSMZEG00005014192) #11	adat3 (ENSMZEG00005014189) #12	SYMPK (ENSMZEG00005014146)	SLC35F5 (ENSMZEG00005014127)	ENSMZEG00005014119	gpr39 (ENSMZEG00005014116)
Eastern happy	MODERN SPECIES	7	TNS1 (ENSACLG00000003009) #26	zgc:136333 (ENSACLG00000002973)	ENSACLG00000002949	bcs1l (ENSACLG00000002897)	ZNF142 (ENSACLG00000002891) #24	PLCD4 (ENSACLG00000002876) #23	ormdl1 (ENSACLG00000002790) #13	pms1 (ENSACLG00000002781) #15	mstnb (ENSACLG00000002763) #14	ENSACLG00000002757 #16	hibch (ENSACLG00000002744) #17	lss (ENSACLG00000002587) #18	ENSACLG00000002461 #19	ybey (ENSACLG00000002438) #20	usp37 (ENSACLG00000002198) #21	cnot9 (ENSACLG00000002163) #22	zgc:136439 (ENSACLG00000002150)	asnsd1 (ENSACLG00000002117)	slc40a1 (ENSACLG00000002052)	wdr75 (ENSACLG00000002025)	STAT4 (ENSACLG00000001992)	ENSACLG00000001967	ENSACLG00000001961	ENSACLG00000001867 #7	fkbp7 (ENSACLG00000001857) #8	osgepl1 (ENSACLG00000001841) #10	alkbh6 (ENSACLG00000001836) #11	adat3 (ENSACLG00000001830) #12	SYMPK (ENSACLG00000001813)	SLC35F5 (ENSACLG00000001791)	ENSACLG00000001784
Lyretail cichlid	MODERN SPECIES	485				ZNF142 (ENSNBRG00000019248) #24	PLCD4 (ENSNBRG00000019214) #23	ormdl1 (ENSNBRG00000019200) #13	pms1 (ENSNBRG00000019179) #15	ENSNBRG00000019021 #15	mstnb (ENSNBRG00000018976) #14	ENSNBRG00000018970 #16	hibch (ENSNBRG00000018847) #17	lss (ENSNBRG00000018750) #18	ENSNBRG00000018677 #19	ybey (ENSNBRG00000018657) #20	usp37 (ENSNBRG00000018529) #21	cnot9 (ENSNBRG00000018481) #22	zgc:136439 (ENSNBRG00000018466)	asnsd1 (ENSNBRG00000018455)	slc40a1 (ENSNBRG00000018434)	ENSNBRG00000018422	ENSNBRG00000018406	STAT4 (ENSNBRG00000018367)	ENSNBRG00000018353	ENSNBRG00000018284 #7	ENSNBRG00000018243	FKBP7 (ENSNBRG00000018221) #8	osgepl1 (ENSNBRG00000018198) #10	alkbh6 (ENSNBRG00000018188) #11	adat3 (ENSNBRG00000018179) #12	SYMPK (ENSNBRG00000018101)	SLC35F5 (ENSNBRG00000018082)
Tiger tail seahorse	MODERN SPECIES	208	STAT4 (ENSHCOG00000010429)	ENSHCOG00000009987	ENSHCOG00000009979 #7	fkbp7 (ENSHCOG00000009934) #8	osgepl1 (ENSHCOG00000009927) #10	alkbh6 (ENSHCOG00000000308) #11	adat3 (ENSHCOG00000000306) #12	ormdl1 (ENSHCOG00000009887) #13	pms1 (ENSHCOG00000009870) #15	mstnb (ENSHCOG00000009683) #14	ENSHCOG00000006942 #16	hibch (ENSHCOG00000006925) #17	lss (ENSHCOG00000006843) #18	ybey (ENSHCOG00000006749) #20	usp37 (ENSHCOG00000006728) #21	cnot9 (ENSHCOG00000006646) #22	PLCD4 (ENSHCOG00000006629) #23	ZNF142 (ENSHCOG00000006596) #24	ENSHCOG00000006583	bcs1l (ENSHCOG00000006571)	zgc:136333 (ENSHCOG00000006560)	ENSHCOG00000006522	ENSHCOG00000006503	slc39a10 (ENSHCOG00000006465)	tmeff2a (ENSHCOG00000006398)	cavin2a (ENSHCOG00000006383)	nabp1a (ENSHCOG00000006374)	ENSHCOG00000006365	ENSHCOG00000006343	CTDSP1 (ENSHCOG00000006267)	ENSHCOG00000006245
Pinecone sodierfish	MODERN SPECIES	13	asnsd1 (ENSMMDG00005020624)	zgc:136439 (ENSMMDG00005020632)	SYMPK (ENSMMDG00005020669)	osgepl1 (ENSMMDG00005021222) #10	adat3 (ENSMMDG00005021224) #12	alkbh6 (ENSMMDG00005021227) #11	ormdl1 (ENSMMDG00005021231) #13	pms1 (ENSMMDG00005021239) #15	mstnb (ENSMMDG00005021255) #14	ENSMMDG00005021258 #16	hibch (ENSMMDG00005021269) #17	lss (ENSMMDG00005021518) #18	ENSMMDG00005021757 #19	ybey (ENSMMDG00005021764) #20	usp37 (ENSMMDG00005021787) #21	cnot9 (ENSMMDG00005021915) #22	PLCD4 (ENSMMDG00005021923) #23	ZNF142 (ENSMMDG00005021928) #24	bcs1l (ENSMMDG00005021930)	zgc:136333 (ENSMMDG00005013527)	TNS1 (ENSMMDG00005013571) #26	igfbp5b (ENSMMDG00005013723)	igfbp2b (ENSMMDG00005013726)	ENSMMDG00005013730	slc4a3 (ENSMMDG00005013733)	COL5A2 (ENSMMDG00005013736)	gulp1a (ENSMMDG00005013737)	ENSMMDG00005013741	ENSMMDG00005013745	ENSMMDG00005013748	lrrc3 (ENSMMDG00005013749)