Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Percomorphaceae	ANCESTRAL SPECIES	29	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Carangaria	ANCESTRAL SPECIES	12	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765.l #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00940000182362 #36	ENSGT00950000183184.a.a.a #37
Turbot	MODERN SPECIES	5	ENSSMAG00000030365	ENSSMAG00000016431 #8	ENSSMAG00000016384 #9	osgepl1 (ENSSMAG00000016314) #10	ENSSMAG00000016306 #11	adat3 (ENSSMAG00000016304) #12	ormdl1 (ENSSMAG00000016290) #13	pms1 (ENSSMAG00000016259) #14	mstnb (ENSSMAG00000016251) #15	ENSSMAG00000016238 #16	hibch (ENSSMAG00000016217) #17	LSS (ENSSMAG00000017301) #18	ENSSMAG00000017233 #19	YBEY (ENSSMAG00000017209) #20	USP37 (ENSSMAG00000017077) #21	CNOT9 (ENSSMAG00000017049) #22	PLCD4 (ENSSMAG00000017007) #23	ZNF142 (ENSSMAG00000016984) #24	bcs1l (ENSSMAG00000016978) #25	zgc:136333 (ENSSMAG00000016968) #26	TNS1 (ENSSMAG00000002630) #27	igfbp5b (ENSSMAG00000022148) #28	igfbp2b (ENSSMAG00000002850) #29	slc4a3 (ENSSMAG00000002874) #30	ENSSMAG00000002910 #31	gulp1a (ENSSMAG00000002959) #32	ENSSMAG00000003038 #33	ENSSMAG00000034020	ENSSMAG00000003063 #34	ENSSMAG00000033261 #35	ENSSMAG00000026149 #36
Tongue sole	MODERN SPECIES	7	ENSCSEG00000016444 #8	fkbp7 (ENSCSEG00000016425) #9	ENSCSEG00000016419	osgepl1 (ENSCSEG00000016416) #10	alkbh6 (ENSCSEG00000016413) #11	adat3 (ENSCSEG00000016408) #12	ormdl1 (ENSCSEG00000016404) #13	ENSCSEG00000016396 #15	ENSCSEG00000016375 #14	ENSCSEG00000016370 #16	hibch (ENSCSEG00000016344) #17	lss (ENSCSEG00000016324) #18	ENSCSEG00000016295 #19	ybey (ENSCSEG00000016288) #20	usp37 (ENSCSEG00000016207) #21	cnot9 (ENSCSEG00000016169) #22	PLCD4 (ENSCSEG00000016126) #23	ENSCSEG00000016104 #24	ENSCSEG00000016097	ENSCSEG00000016080 #27	ENSCSEG00000016040 #27	ENSCSEG00000016032	itgav (ENSCSEG00000016012)	ENSCSEG00000016007	MYLK (ENSCSEG00000015990)	ENSCSEG00000015955	ENSCSEG00000015947	ENSCSEG00000015911	ENSCSEG00000015805	ENSCSEG00000015785	ENSCSEG00000015779
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Seriola	ANCESTRAL SPECIES	34	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Greater amberjack	MODERN SPECIES	21	ENSSDUG00000007339 #8	ENSSDUG00000007349 #8	fkbp7 (ENSSDUG00000007385) #9	osgepl1 (ENSSDUG00000007391) #10	alkbh6 (ENSSDUG00000007406) #11	adat3 (ENSSDUG00000007414) #12	ormdl1 (ENSSDUG00000007421) #13	pms1 (ENSSDUG00000007435) #14	mstnb (ENSSDUG00000007459) #15	ENSSDUG00000007475 #16	hibch (ENSSDUG00000007481) #17	lss (ENSSDUG00000007508) #18	MCM3AP (ENSSDUG00000007571) #19	ybey (ENSSDUG00000007610) #20	usp37 (ENSSDUG00000007623) #21	cnot9 (ENSSDUG00000007667) #22	PLCD4 (ENSSDUG00000007711) #23	ZNF142 (ENSSDUG00000007730) #24	bcs1l (ENSSDUG00000007742) #25	zgc:136333 (ENSSDUG00000007765) #26	TNS1 (ENSSDUG00000007852) #27	igfbp5b (ENSSDUG00000007969) #28	igfbp2b (ENSSDUG00000007987) #29	ENSSDUG00000007994	slc4a3 (ENSSDUG00000008026) #30	COL5A2 (ENSSDUG00000008163) #31	gulp1a (ENSSDUG00000008263) #32	ENSSDUG00000008428 #33	ENSSDUG00000008445 #34	ENSSDUG00000008481 #36	lrrc3 (ENSSDUG00000008494)
Yellowtail amberjack	MODERN SPECIES	3051	ENSSLDG00000015021 #7	ENSSLDG00000015084 #8	fkbp7 (ENSSLDG00000015200) #9	osgepl1 (ENSSLDG00000015220) #10	alkbh6 (ENSSLDG00000015256) #11	adat3 (ENSSLDG00000015266) #12	ormdl1 (ENSSLDG00000015274) #13	pms1 (ENSSLDG00000015291) #14	mstnb (ENSSLDG00000015315) #15	ENSSLDG00000015326 #16	hibch (ENSSLDG00000015336) #17	lss (ENSSLDG00000015382) #18	MCM3AP (ENSSLDG00000016147) #19	ybey (ENSSLDG00000019474) #20	usp37 (ENSSLDG00000019488) #21	cnot9 (ENSSLDG00000019516) #22	PLCD4 (ENSSLDG00000019540) #23	ZNF142 (ENSSLDG00000019564) #24	bcs1l (ENSSLDG00000019606) #25	zgc:136333 (ENSSLDG00000019620) #26	TNS1 (ENSSLDG00000019664) #27	ENSSLDG00000019911	igfbp5b (ENSSLDG00000019917) #28	igfbp2b (ENSSLDG00000019928) #29	slc4a3 (ENSSLDG00000019942) #30	ENSSLDG00000019989	gulp1a (ENSSLDG00000020054) #32	ENSSLDG00000020075 #33	ENSSLDG00000020088 #34	ENSSLDG00000020135 #35	ENSSLDG00000020139 #37
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	216	ENSLCAG00010001401 #7	ENSLCAG00010000783 #8	ENSLCAG00010000380 #9	osgepl1 (ENSLCAG00010000367) #10	alkbh6 (ENSLCAG00010000357) #11	adat3 (ENSLCAG00010000350) #12	ormdl1 (ENSLCAG00010000333) #13	pms1 (ENSLCAG00010000283) #14	mstnb (ENSLCAG00010022821) #15	ENSLCAG00010022812 #16	hibch (ENSLCAG00010022801) #17	lss (ENSLCAG00010022762) #18	ENSLCAG00010022745 #19	ybey (ENSLCAG00010022743) #20	usp37 (ENSLCAG00010022741) #21	cnot9 (ENSLCAG00010022735) #22	PLCD4 (ENSLCAG00010022517) #23	ENSLCAG00010022468 #24	ENSLCAG00010022467 #24	bcs1l (ENSLCAG00010022465) #25	zgc:136333 (ENSLCAG00010022461) #26	TNS1 (ENSLCAG00010022355) #27	igfbp5b (ENSLCAG00010022316) #28	igfbp2b (ENSLCAG00010022310) #29	ENSLCAG00010022307	slc4a3 (ENSLCAG00010022227) #30
Barramundi perch	MODERN SPECIES	1799																cnot9 (ENSLCAG00010021784) #22
Anabantaria	ANCESTRAL SPECIES	14	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Climbing perch	MODERN SPECIES	12	ENSATEG00000008730 #7	ENSATEG00000008815 #7	ENSATEG00000008833 #8	ENSATEG00000008852 #9	osgepl1 (ENSATEG00000008881) #10	ENSATEG00000008859 #11	adat3 (ENSATEG00000008909) #12	ormdl1 (ENSATEG00000008911) #13	pms1 (ENSATEG00000008961) #14	mstnb (ENSATEG00000008968) #15	ENSATEG00000008989 #16	hibch (ENSATEG00000008995) #17	ENSATEG00000009009 #18	ENSATEG00000009098 #20	USP37 (ENSATEG00000009106) #21	CNOT9 (ENSATEG00000009188) #22	PLCD4 (ENSATEG00000009217) #23	ZNF142 (ENSATEG00000009234) #24	bcs1l (ENSATEG00000009249) #25	zgc:136333 (ENSATEG00000009256) #26	TNS1 (ENSATEG00000009288) #27	igfbp5b (ENSATEG00000009460) #28	igfbp2b (ENSATEG00000009467) #29	ENSATEG00000027372	slc4a3 (ENSATEG00000009496) #30	ENSATEG00000009545 #31	gulp1a (ENSATEG00000009652) #32	ENSATEG00000009708 #33	ENSATEG00000009722 #34	ENSATEG00000009777 #35	ENSATEG00000009800 #37
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000011038	ENSBSLG00000011023	ENSBSLG00000011010	osgepl1 (ENSBSLG00000010975) #10	adat3 (ENSBSLG00000010966) #12	ormdl1 (ENSBSLG00000010956) #13	pms1 (ENSBSLG00000010729) #14	mstnb (ENSBSLG00000010624) #15	ENSBSLG00000010463 #16	ENSBSLG00000010461	hibch (ENSBSLG00000009802) #17	lss (ENSBSLG00000009140) #18	ENSBSLG00000008957 #19	ybey (ENSBSLG00000008603) #20	usp37 (ENSBSLG00000007926) #21	cnot9 (ENSBSLG00000007738) #22	PLCD4 (ENSBSLG00000006962) #23	maip1 (ENSBSLG00000006940)	maip1 (ENSBSLG00000006922)	maip1 (ENSBSLG00000006900)	tyw5 (ENSBSLG00000006858)	ENSBSLG00000006848	ENSBSLG00000006516	RAB17 (ENSBSLG00000006286)	MLPH (ENSBSLG00000005933)	ENSBSLG00000005925	COL6A3 (ENSBSLG00000005154)	cops8 (ENSBSLG00000004929)	ENSBSLG00000004877	ENSBSLG00000026090	ENSBSLG00000025939
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000010625 #8	ENSMAMG00000010685	ENSMAMG00000025028 #9	osgepl1 (ENSMAMG00000010694) #10	ENSMAMG00000010698 #11	adat3 (ENSMAMG00000010706) #12	ormdl1 (ENSMAMG00000010710) #13	pms1 (ENSMAMG00000010717) #14	mstnb (ENSMAMG00000010725) #15	ENSMAMG00000010733 #16	hibch (ENSMAMG00000010741) #17	LSS (ENSMAMG00000010753) #18	ENSMAMG00000010786 #19	YBEY (ENSMAMG00000010832) #20	USP37 (ENSMAMG00000010862) #21	CNOT9 (ENSMAMG00000011021) #22	PLCD4 (ENSMAMG00000011046) #23	ZNF142 (ENSMAMG00000011171) #24	bcs1l (ENSMAMG00000011182) #25	zgc:136333 (ENSMAMG00000011191) #26	TNS1 (ENSMAMG00000011244) #27	igfbp5b (ENSMAMG00000011353) #28	igfbp2b (ENSMAMG00000024703) #29	slc4a3 (ENSMAMG00000011375) #30	COL5A2 (ENSMAMG00000011468) #31	gulp1a (ENSMAMG00000011545) #32	ENSMAMG00000026701 #33	ENSMAMG00000028000 #34	FAM171B (ENSMAMG00000011601) #37	lrrc3 (ENSMAMG00000011617)	pcbp3 (ENSMAMG00000011620)
Eupercaria	ANCESTRAL SPECIES	25	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Ballan wrasse	MODERN SPECIES	55	lss (ENSLBEG00000028041) #18	hibch (ENSLBEG00000028083) #17	ENSLBEG00000028129 #16	mstnb (ENSLBEG00000028147) #15	pms1 (ENSLBEG00000028137) #14	ormdl1 (ENSLBEG00000028157) #13	adat3 (ENSLBEG00000028168) #12	alkbh6 (ENSLBEG00000028172) #11	osgepl1 (ENSLBEG00000028176) #10	fkbp7 (ENSLBEG00000028184) #9	ENSLBEG00000028193 #8	ENSLBEG00000000255 #8	MCM3AP (ENSLBEG00000000276) #19	ybey (ENSLBEG00000000362) #20	usp37 (ENSLBEG00000000389) #21	cnot9 (ENSLBEG00000000729) #22	PLCD4 (ENSLBEG00000000786) #23	ZNF142 (ENSLBEG00000000807) #24	bcs1l (ENSLBEG00000000875) #25	zgc:136333 (ENSLBEG00000000917) #26
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
European seabass	MODERN SPECIES	5	ENSDLAG00005022435 #9	osgepl1 (ENSDLAG00005022441) #10	adat3 (ENSDLAG00005022449) #12	ENSDLAG00005022445 #11	ormdl1 (ENSDLAG00005027751) #13	pms1 (ENSDLAG00005022460) #14	mstnb (ENSDLAG00005022521) #15	ENSDLAG00005022536 #16	hibch (ENSDLAG00005022541) #17	LSS (ENSDLAG00005022621) #18	ENSDLAG00005022735	ENSDLAG00005022739	ENSDLAG00005022744 #19	YBEY (ENSDLAG00005034841) #20	USP37 (ENSDLAG00005022800) #21	CNOT9 (ENSDLAG00005022857) #22	PLCD4 (ENSDLAG00005022885) #23	ZNF142 (ENSDLAG00005023256) #24	zgc:136333 (ENSDLAG00005023265) #26	TNS1 (ENSDLAG00005023305) #27	igfbp5b (ENSDLAG00005024114) #28	igfbp2b (ENSDLAG00005024118) #29	slc4a3 (ENSDLAG00005024195) #30	ENSDLAG00005024788 #31	gulp1a (ENSDLAG00005004339) #32	ENSDLAG00005033365 #33	ENSDLAG00005004586 #34	ENSDLAG00005005708 #37	lrrc3 (ENSDLAG00005031007)	pcbp3 (ENSDLAG00005005870)	ENSDLAG00005006140
Large yellow croaker	MODERN SPECIES		ENSLCRG00005014720	hdac4 (ENSLCRG00005013772)	twist2 (ENSLCRG00005013760)	ENSLCRG00005013759	asb1 (ENSLCRG00005013758)	traf3ip1 (ENSLCRG00005013756)	ADARB1 (ENSLCRG00005013696)	ENSLCRG00005013693	ENSLCRG00005013688	ENSLCRG00005013687	zgc:162396 (ENSLCRG00005013685)	zgc:162780 (ENSLCRG00005013684)	ENSLCRG00005013683 #19	ybey (ENSLCRG00005013682) #20	usp37 (ENSLCRG00005013676) #21	cnot9 (ENSLCRG00005013674) #22	PLCD4 (ENSLCRG00005013664) #23	ZNF142 (ENSLCRG00005013660) #24	bcs1l (ENSLCRG00005013659) #25	CYP27A1 (ENSLCRG00005013658) #26	TNS1 (ENSLCRG00005012097) #27	igfbp5b (ENSLCRG00005012082) #28	igfbp2b (ENSLCRG00005012081) #29	slc4a3 (ENSLCRG00005009948) #30	COL5A2 (ENSLCRG00005007993) #31	gulp1a (ENSLCRG00005007966) #32	ENSLCRG00005007962 #33	ENSLCRG00005007405 #34	ENSLCRG00005007392 #37	lrrc3 (ENSLCRG00005007390)	pcbp3 (ENSLCRG00005007381)
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010009144 #7	ENSSAUG00010004954 #8	fkbp7 (ENSSAUG00010004880) #9	osgepl1 (ENSSAUG00010004873) #10	alkbh6 (ENSSAUG00010004870) #11	adat3 (ENSSAUG00010004867) #12	ormdl1 (ENSSAUG00010004864) #13	pms1 (ENSSAUG00010004800) #14	mstnb (ENSSAUG00010004791) #15	ENSSAUG00010004790 #16	hibch (ENSSAUG00010004770) #17	lss (ENSSAUG00010004683) #18	ENSSAUG00010004668 #19	ybey (ENSSAUG00010004664) #20	usp37 (ENSSAUG00010004648) #21	cnot9 (ENSSAUG00010004638) #22	PLCD4 (ENSSAUG00010004216) #23	ZNF142 (ENSSAUG00010004108) #24	bcs1l (ENSSAUG00010004068) #25	zgc:136333 (ENSSAUG00010015642) #26	TNS1 (ENSSAUG00010015615) #27	igfbp5b (ENSSAUG00010015605) #28	igfbp2b (ENSSAUG00010015599) #29	slc4a3 (ENSSAUG00010015089) #30	COL5A2 (ENSSAUG00010014375) #31	gulp1a (ENSSAUG00010014239) #32	ENSSAUG00010014232 #33	ENSSAUG00010014112 #34	ENSSAUG00010014107 #35	FAM171B (ENSSAUG00010014104) #37	lrrc3 (ENSSAUG00010014103)
Perciformes	ANCESTRAL SPECIES	23	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000021571 #7	ENSCGOG00000021597 #8	fkbp7 (ENSCGOG00000021818) #9	osgepl1 (ENSCGOG00000021820) #10	alkbh6 (ENSCGOG00000021822) #11	pms1 (ENSCGOG00000021826) #14	adat3 (ENSCGOG00000021904) #12	ormdl1 (ENSCGOG00000021905) #13	mstnb (ENSCGOG00000021916) #15	ENSCGOG00000021934 #16	hibch (ENSCGOG00000021938) #17	lss (ENSCGOG00000021990) #18	ENSCGOG00000022398 #19	ybey (ENSCGOG00000022413) #20	usp37 (ENSCGOG00000022416) #21	cnot9 (ENSCGOG00000022431) #22	PLCD4 (ENSCGOG00000022467) #23	ZNF142 (ENSCGOG00000023002) #24	bcs1l (ENSCGOG00000023004) #25	zgc:136333 (ENSCGOG00000023008) #26	TNS1 (ENSCGOG00000023029) #27	igfbp5b (ENSCGOG00000023194) #28	igfbp2b (ENSCGOG00000023204) #29	slc4a3 (ENSCGOG00000023208) #30	COL5A2 (ENSCGOG00000023213) #31	gulp1a (ENSCGOG00000023238) #32	ENSCGOG00000023244	ENSCGOG00000023247 #33	ENSCGOG00000023279 #34	ENSCGOG00000023443 #37	lrrc3 (ENSCGOG00000012897)
Pike perch	MODERN SPECIES	191	ENSSLUG00000019736	ENSSLUG00000018646	fkbp7 (ENSSLUG00000018593) #9	osgepl1 (ENSSLUG00000018585) #10	alkbh6 (ENSSLUG00000018581) #11	adat3 (ENSSLUG00000018579) #12	ormdl1 (ENSSLUG00000018570) #13	pms1 (ENSSLUG00000018218) #14	mstnb (ENSSLUG00000018180) #15	ENSSLUG00000018175 #16	hibch (ENSSLUG00000017666) #17	lss (ENSSLUG00000016140) #18	ENSSLUG00000015955 #19	ybey (ENSSLUG00000015934) #20	usp37 (ENSSLUG00000015895) #21	cnot9 (ENSSLUG00000015860) #22	PLCD4 (ENSSLUG00000015812) #23	ENSSLUG00000015766 #25	ENSSLUG00000015731 #23
Cottioidei	ANCESTRAL SPECIES	14	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091.h #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34
Stickleback	MODERN SPECIES	16	ENSGACG00000002673 #7	ENSGACG00000002657 #8	fkbp7 (ENSGACG00000002654) #9	osgepl1 (ENSGACG00000002648) #10	alkbh6 (ENSGACG00000002647) #11	adat3 (ENSGACG00000002645) #12	ormdl1 (ENSGACG00000002642) #13	pms1 (ENSGACG00000002634) #14	mstnb (ENSGACG00000002630) #15	ENSGACG00000002627	hibch (ENSGACG00000002609) #17	lss (ENSGACG00000002592) #18	ENSGACG00000002570 #19	ybey (ENSGACG00000002567) #20	usp37 (ENSGACG00000002557) #21	cnot9 (ENSGACG00000002543) #22	PLCD4 (ENSGACG00000002540) #23	ZNF142 (ENSGACG00000002534) #24	zgc:136333 (ENSGACG00000002514) #26	TNS1 (ENSGACG00000002511) #27	igfbp5b (ENSGACG00000002508) #28	igfbp2b (ENSGACG00000002506) #29	slc4a3 (ENSGACG00000002501) #30	COL5A2 (ENSGACG00000002409) #31	gulp1a (ENSGACG00000002401) #32	ENSGACG00000002393 #33	ENSGACG00000002387 #34	gjc4b (ENSGACG00000002384)	CXCR2 (ENSGACG00000002380)	faima (ENSGACG00000002376)	ENSGACG00000002367
Lumpfish	MODERN SPECIES	13	ENSCLMG00005009983	ENSCLMG00005009982	SYMPK (ENSCLMG00005004930)	SLC35F5 (ENSCLMG00005004215)	ENSCLMG00005004213	gpr39 (ENSCLMG00005004212)	LYPD1 (ENSCLMG00005004211)	ftcdnl1 (ENSCLMG00005019254)	ENSCLMG00005019253	ENSCLMG00005019250	tfg (ENSCLMG00005019249)	jagn1a (ENSCLMG00005019248)	ENSCLMG00005019247 #19	ybey (ENSCLMG00005019246) #20	usp37 (ENSCLMG00005019240) #21	CNOT9 (ENSCLMG00005019237) #22	PLCD4 (ENSCLMG00005018795) #23	ZNF142 (ENSCLMG00005018790) #24	bcs1l (ENSCLMG00005018789) #25	zgc:136333 (ENSCLMG00005018672) #26	igfbp5b (ENSCLMG00005018668) #28	ENSCLMG00005018667 #29	slc4a3 (ENSCLMG00005018665) #30	COL5A2 (ENSCLMG00005018662) #31	gulp1a (ENSCLMG00005018660) #32	ENSCLMG00005018659 #33	ENSCLMG00005017855 #34	hspe1 (ENSCLMG00005017849)	hspd1 (ENSCLMG00005017848)	coq10b (ENSCLMG00005017847)	SF3B1 (ENSCLMG00005017761)
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Oryzias	ANCESTRAL SPECIES	10	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Oryzias_a	ANCESTRAL SPECIES	45	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000161939	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a
Chinese medaka	MODERN SPECIES	703	GLS (ENSOSIG00000012852) #8	fkbp7 (ENSOSIG00000012807) #9	DNAI2 (ENSOSIG00000012796)	osgepl1 (ENSOSIG00000012793) #10	alkbh6 (ENSOSIG00000012789) #11	adat3 (ENSOSIG00000012786) #12	ormdl1 (ENSOSIG00000012784) #13	pms1 (ENSOSIG00000012727) #14	mstnb (ENSOSIG00000012721) #15	ENSOSIG00000012720 #16	hibch (ENSOSIG00000012281) #17	lss (ENSOSIG00000012228) #18	ENSOSIG00000012142 #19	ybey (ENSOSIG00000012136) #20	usp37 (ENSOSIG00000012075) #21	cnot9 (ENSOSIG00000012071) #22	PLCD4 (ENSOSIG00000010959) #23	ZNF142 (ENSOSIG00000010957) #24	bcs1l (ENSOSIG00000010956) #25	zgc:136333 (ENSOSIG00000010929) #26	ENSOSIG00000010923 ##27	TNS1 (ENSOSIG00000010884) #27
Japanese Medaka HdrR	MODERN SPECIES	13	GLS (ENSORLG00000015157) #8	fkbp7 (ENSORLG00000015126) #9	ENSORLG00000024865	alkbh6 (ENSORLG00000015103) #11	osgepl1 (ENSORLG00000015117) #10	ormdl1 (ENSORLG00000015100) #13	pms1 (ENSORLG00000015090) #14	mstnb (ENSORLG00000015057) #15	ENSORLG00000015048 #16	hibch (ENSORLG00000015037) #17	LSS (ENSORLG00000015003) #18	lss (ENSORLG00000028452) #18	MCM3AP (ENSORLG00000014980) #19	ybey (ENSORLG00000023922) #20	usp37 (ENSORLG00000014960) #21	cnot9 (ENSORLG00000014925) #22	PLCD4 (ENSORLG00000014901) #23	ZNF142 (ENSORLG00000014849) #24	bcs1l (ENSORLG00000014823) #25	zgc:136333 (ENSORLG00000014811) #26	ENSORLG00000028136	TNS1 (ENSORLG00000014781) #27	ENSORLG00000025476	ENSORLG00000022632	igfbp5b (ENSORLG00000030103) #28	igfbp2b (ENSORLG00000014695) #29	slc4a3 (ENSORLG00000030477) #30	COL5A2 (ENSORLG00000014658) #31	ENSORLG00000027152	gulp1a (ENSORLG00000014478) #32	ENSORLG00000025169
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00950000182996.b.b.c.b.h.b.a	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37
Indian medaka	MODERN SPECIES	18	ENSOMEG00000022183 #8	fkbp7 (ENSOMEG00000022136) #9	osgepl1 (ENSOMEG00000022115) #10	alkbh6 (ENSOMEG00000022075) #11	ormdl1 (ENSOMEG00000022066) #13	adat3 (ENSOMEG00000022041) #12	pms1 (ENSOMEG00000022030) #14	mstnb (ENSOMEG00000021961) #15	ENSOMEG00000021937 #16	hibch (ENSOMEG00000021921) #17	lss (ENSOMEG00000021872) #18	lss (ENSOMEG00000021845) #18	ENSOMEG00000021796 #19	ybey (ENSOMEG00000021714) #20	usp37 (ENSOMEG00000021685) #21	cnot9 (ENSOMEG00000021642) #22	PLCD4 (ENSOMEG00000000898) #23	ZNF142 (ENSOMEG00000000914) #24	bcs1l (ENSOMEG00000021530) #25	zgc:136333 (ENSOMEG00000021503) #26	ENSOMEG00000021450	TNS1 (ENSOMEG00000021378) #27	igfbp5b (ENSOMEG00000020658) #28	igfbp2b (ENSOMEG00000020645) #29	igfbp2b (ENSOMEG00000020624) #29	slc4a3 (ENSOMEG00000020610) #30	COL5A2 (ENSOMEG00000020553) #31	gulp1a (ENSOMEG00000020451) #32	ENSOMEG00000020328	ENSOMEG00000020315	ENSOMEG00000020290 #33
Javanese ricefish	MODERN SPECIES	13	ENSOJAG00000022473 #8	fkbp7 (ENSOJAG00000022365) #9	osgepl1 (ENSOJAG00000022351) #10	alkbh6 (ENSOJAG00000022343) #11	adat3 (ENSOJAG00000022338) #12	ormdl1 (ENSOJAG00000022329) #13	pms1 (ENSOJAG00000022261) #14	mstnb (ENSOJAG00000022229) #15	ENSOJAG00000022224 #16	hibch (ENSOJAG00000022179) #17	lss (ENSOJAG00000021730) #18	ENSOJAG00000021686	MCM3AP (ENSOJAG00000021610) #19	ybey (ENSOJAG00000021589) #20	usp37 (ENSOJAG00000021547) #21	cnot9 (ENSOJAG00000021505) #22	PLCD4 (ENSOJAG00000021256) #23	ZNF142 (ENSOJAG00000021212) #24	bcs1l (ENSOJAG00000021174) #25	zgc:136333 (ENSOJAG00000021136) #26	ENSOJAG00000021120	TNS1 (ENSOJAG00000020938) #27	igfbp5b (ENSOJAG00000020921) #28	igfbp2b (ENSOJAG00000020918) #29	ENSOJAG00000020910	slc4a3 (ENSOJAG00000019855) #30	ENSOJAG00000019263	gulp1a (ENSOJAG00000019141) #32	ENSOJAG00000019121 #33	ENSOJAG00000018181 #34	ENSOJAG00000018059 #37
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Aplocheiloidei	ANCESTRAL SPECIES	241													ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27
Mangrove rivulus	MODERN SPECIES	136	lrrc3 (ENSKMAG00000018588)	pcbp3 (ENSKMAG00000018530)	ENSKMAG00000018460	ENSKMAG00000018283	CTDSP1 (ENSKMAG00000018212)	ENSKMAG00000018133	ENSKMAG00000018105	nabp1a (ENSKMAG00000018072)	cavin2a (ENSKMAG00000018058)	tmeff2a (ENSKMAG00000018018)	ENSKMAG00000018000	slc39a10 (ENSKMAG00000017958)	ENSKMAG00000017908 #19	ybey (ENSKMAG00000017890) #20	usp37 (ENSKMAG00000017787) #21	cnot9 (ENSKMAG00000017715) #22	PLCD4 (ENSKMAG00000017684) #23	ZNF142 (ENSKMAG00000017660) #24	bcs1l (ENSKMAG00000017637) #25	zgc:136333 (ENSKMAG00000017556) #26	ENSKMAG00000017529 #34	ENSKMAG00000017511 #33
Turquoise killifish	MODERN SPECIES	408													ENSNFUG00015017543 #19	ybey (ENSNFUG00015017595) #20	usp37 (ENSNFUG00015017626) #21	RQCD1 (ENSNFUG00015017817) #22	PLCD4 (ENSNFUG00015017897) #23	ZNF142 (ENSNFUG00015019936) #24
Cyprinodontoidei	ANCESTRAL SPECIES	30	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b.n #26	ENSGT00950000182905.a.a.a.a.b.m #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35
Poeciliinae	ANCESTRAL SPECIES	29	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b.n #26	ENSGT00950000182905.a.a.a.a.b.m #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Poecilia	ANCESTRAL SPECIES	46	ENSGT00940000153744.A.e.a #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b.n #26	ENSGT00950000182905.a.a.a.a.b.m #26	ENSGT00940000155400.B.i #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
NAME_6	ANCESTRAL SPECIES	68	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b.c #15	ENSGT00940000165813.b.d #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00390000013973.B.h	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b.n #26	ENSGT00950000182905.a.a.a.a.b.m #26	ENSGT00940000155400.B.i #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37	ENSGT00940000154360.A.b.a
Amazon molly	MODERN SPECIES	299				ENSPFOG00000011795	pms1 (ENSPFOG00000011839) #14	mstnb (ENSPFOG00000021946) #15	mstnb (ENSPFOG00000012130) #15	ddt (ENSPFOG00000012202)	gstt1b (ENSPFOG00000012223)	hibch (ENSPFOG00000012275) #17	lss (ENSPFOG00000012442) #18	ENSPFOG00000012841	ENSPFOG00000012860 #19	ybey (ENSPFOG00000013092) #20	usp37 (ENSPFOG00000013121) #21	cnot9 (ENSPFOG00000013296) #22	PLCD4 (ENSPFOG00000013304) #23	ZNF142 (ENSPFOG00000013660) #24	bcs1l (ENSPFOG00000013687) #25	CYP27A1 (ENSPFOG00000024088) #26	ENSPFOG00000013767 #26	TNS1 (ENSPFOG00000013948) #27	igfbp5b (ENSPFOG00000014472) #28	igfbp2b (ENSPFOG00000014498) #29	slc4a3 (ENSPFOG00000014529) #30	ENSPFOG00000014959 #31	gulp1a (ENSPFOG00000015272) #32	ENSPFOG00000015315 #33	ENSPFOG00000015333 #34	ENSPFOG00000015399 #37	lrrc3 (ENSPFOG00000020156)
Sailfin molly	MODERN SPECIES	142										ENSPLAG00000021596	ENSPLAG00000021589	ENSPLAG00000021586	ENSPLAG00000021578 #19	ybey (ENSPLAG00000021550) #20	usp37 (ENSPLAG00000021547) #21	cnot9 (ENSPLAG00000021539) #22	PLCD4 (ENSPLAG00000021512) #23	ZNF142 (ENSPLAG00000021487) #24	bcs1l (ENSPLAG00000021477) #25	CYP27A1 (ENSPLAG00000021467) #26	CYP27A1 (ENSPLAG00000021420) #26	TNS1 (ENSPLAG00000021354) #27
Guppy	MODERN SPECIES	450	alkbh6 (ENSPREG00000001145) #11	adat3 (ENSPREG00000001135) #12	ormdl1 (ENSPREG00000001117) #13	pms1 (ENSPREG00000001098) #14	mstnb (ENSPREG00000001076) #15	ddt (ENSPREG00000000981)	gstt1b (ENSPREG00000000954)	ENSPREG00000000948 #16	hibch (ENSPREG00000000941) #17	lss (ENSPREG00000000862) #18	ENSPREG00000000852	ENSPREG00000000836	ENSPREG00000000812 #19	ybey (ENSPREG00000000796) #20	usp37 (ENSPREG00000000789) #21	cnot9 (ENSPREG00000000758) #22	PLCD4 (ENSPREG00000000734) #23	ZNF142 (ENSPREG00000000722) #24	bcs1l (ENSPREG00000000620) #25	CYP27A1 (ENSPREG00000000548) #26	ENSPREG00000000541 #26	ENSPREG00000000540 #27	ENSPREG00000020879 #27	igfbp5b (ENSPREG00000020870) #28	igfbp2b (ENSPREG00000020866) #29	slc4a3 (ENSPREG00000020828) #30	COL5A2 (ENSPREG00000020747) #31	gulp1a (ENSPREG00000020679) #32	ENSPREG00000020656 #33	ENSPREG00000020639 #34	ENSPREG00000020624 #35
Platyfish	MODERN SPECIES	21	wdr75 (ENSXMAG00000005811)	ENSXMAG00000022033 #7	ENSXMAG00000005845 #7	ENSXMAG00000005850 #8	fkbp7 (ENSXMAG00000005881) #9	osgepl1 (ENSXMAG00000005885) #10	ormdl1 (ENSXMAG00000005900) #13	adat3 (ENSXMAG00000005897) #12	pms1 (ENSXMAG00000005904) #14	ENSXMAG00000026653 #16	hibch (ENSXMAG00000006425) #17	lss (ENSXMAG00000006445) #18	ENSXMAG00000015028 #19	ybey (ENSXMAG00000015012) #20	usp37 (ENSXMAG00000014971) #21	cnot9 (ENSXMAG00000006474) #22	PLCD4 (ENSXMAG00000006488) #23	ZNF142 (ENSXMAG00000024729) #24	bcs1l (ENSXMAG00000006514) #25	CYP27A1 (ENSXMAG00000006540) #26	ENSXMAG00000006529 #26	ENSXMAG00000028776	TNS1 (ENSXMAG00000009264) #27	ENSXMAG00000028950	ENSXMAG00000021442	ENSXMAG00000026794	igfbp5b (ENSXMAG00000006558) #28	igfbp2b (ENSXMAG00000026555) #29	slc4a3 (ENSXMAG00000006572) #30	ENSXMAG00000028362 #31	gulp1a (ENSXMAG00000007102) #32
NAME_4	ANCESTRAL SPECIES	78	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570.f #18	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b.n #26	ENSGT00950000182905.a.a.a.a.b.m #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765.g #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37
Sheepshead minnow	MODERN SPECIES	257								ENSCVAG00000022778	ENSCVAG00000022748 #16	hibch (ENSCVAG00000022738) #17	lss (ENSCVAG00000022724) #18	ENSCVAG00000022671	ENSCVAG00000022653 #19	ybey (ENSCVAG00000022642) #20	usp37 (ENSCVAG00000022633) #21	cnot9 (ENSCVAG00000022621) #22	PLCD4 (ENSCVAG00000022607) #23	ZNF142 (ENSCVAG00000022595) #24	bcs1l (ENSCVAG00000022527) #25	CYP27A1 (ENSCVAG00000022499) #26	ENSCVAG00000022455 #26	NQO2 (ENSCVAG00000022450)	TNS1 (ENSCVAG00000022436) #27	igfbp5b (ENSCVAG00000022402) #28	igfbp2b (ENSCVAG00000022399) #29	ENSCVAG00000022395	slc4a3 (ENSCVAG00000022384) #30	COL5A2 (ENSCVAG00000022151) #31	gulp1a (ENSCVAG00000022087) #32	ENSCVAG00000022015 #33	ENSCVAG00000022001 #34
Mummichog	MODERN SPECIES	1082													ENSFHEG00000001113 #19	ybey (ENSFHEG00000001108) #20	usp37 (ENSFHEG00000001100) #21	cnot9 (ENSFHEG00000001097) #22
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00710000108330	ENSGT00940000159765 #30	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00950000183184.a.a.a #37
Pomacentridae	ANCESTRAL SPECIES	51	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155224.d	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00940000182362 #36
Pomacentridae_A	ANCESTRAL SPECIES	52	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155224.d	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00940000177805 #35	ENSGT00940000182362 #36
Amphiprion	ANCESTRAL SPECIES	52	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00940000156180.f #23	ENSGT00940000163074 #24	ENSGT00390000005415 #25	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00940000155400.B #27	ENSGT00940000182580	ENSGT00940000155890.a.a #28	ENSGT00940000158542.b #29	ENSGT00940000159765 #30	ENSGT00940000155224.d	ENSGT00940000155675.p.a #31	ENSGT00940000156186.l.b #32	ENSGT00940000165273 #33	ENSGT00940000165235.b #34	ENSGT00950000183184.a.a.a #37
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	131																cnot9 (ENSAOCG00000007672) #22	PLCD4 (ENSAOCG00000007641) #23	ZNF142 (ENSAOCG00000007625) #24	bcs1l (ENSAOCG00000007615) #25	CYP27A1 (ENSAOCG00000007578) #26
Clown anemonefish	MODERN SPECIES	2268										ENSAOCG00000017191 #16	hibch (ENSAOCG00000017204) #17	lss (ENSAOCG00000017280) #18	ENSAOCG00000017340 #19	ybey (ENSAOCG00000017346) #20	usp37 (ENSAOCG00000017372) #21	cnot9 (ENSAOCG00000017401) #22	PLCD4 (ENSAOCG00000017435) #23
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000003821 #7	ENSAPEG00000003850 #8	fkbp7 (ENSAPEG00000003880) #9	osgepl1 (ENSAPEG00000003890) #10	alkbh6 (ENSAPEG00000003934) #11	ormdl1 (ENSAPEG00000003961) #13	adat3 (ENSAPEG00000003977) #12	pms1 (ENSAPEG00000003991) #14	mstnb (ENSAPEG00000004012) #15	ENSAPEG00000004029 #16	hibch (ENSAPEG00000004045) #17	lss (ENSAPEG00000004092) #18	ENSAPEG00000004174 #19	ybey (ENSAPEG00000004197) #20	usp37 (ENSAPEG00000004235) #21	cnot9 (ENSAPEG00000004365) #22	PLCD4 (ENSAPEG00000004394) #23	ZNF142 (ENSAPEG00000004469) #24	bcs1l (ENSAPEG00000004528) #25	zgc:136333 (ENSAPEG00000004557) #26	TNS1 (ENSAPEG00000004583) #27	ENSAPEG00000004603	ENSAPEG00000004619	igfbp5b (ENSAPEG00000004632) #28	igfbp2b (ENSAPEG00000004641) #29	slc4a3 (ENSAPEG00000004673) #30	ENSAPEG00000004861	gulp1a (ENSAPEG00000004993) #32	ENSAPEG00000005066 #33	ENSAPEG00000005085 #34	ENSAPEG00000005152 #35
Spiny chromis	MODERN SPECIES	2732													ENSAPOG00000016059 #19	ybey (ENSAPOG00000016069) #20	usp37 (ENSAPOG00000016082) #21	cnot9 (ENSAPOG00000016119) #22
Bicolor damselfish	MODERN SPECIES	1960										ENSSPAG00000015636 #16	hibch (ENSSPAG00000015644) #17	lss (ENSSPAG00000015689) #18	ENSSPAG00000015778 #19	ybey (ENSSPAG00000015824) #20	usp37 (ENSSPAG00000015839) #21	cnot9 (ENSSPAG00000015881) #22	PLCD4 (ENSSPAG00000015928) #23	ZNF142 (ENSSPAG00000016019) #24
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192
Midas cichlid	MODERN SPECIES	33				bcs1l (ENSACIG00000004834) #25	ZNF142 (ENSACIG00000004854) #24	PLCD4 (ENSACIG00000004893) #23	ormdl1 (ENSACIG00000004924) #13	pms1 (ENSACIG00000004933) #14	mstnb (ENSACIG00000005038) #15	ENSACIG00000005048 #16	hibch (ENSACIG00000005054) #17	lss (ENSACIG00000005086) #18	ENSACIG00000005137 #19	ybey (ENSACIG00000005308) #20	usp37 (ENSACIG00000005323) #21	cnot9 (ENSACIG00000005487) #22	zgc:136439 (ENSACIG00000005506)	ENSACIG00000005548	ENSACIG00000005575	slc40a1 (ENSACIG00000005588)	wdr75 (ENSACIG00000005615)	STAT4 (ENSACIG00000005777) #7	ENSACIG00000005855 #7	ENSACIG00000006253 #7	ENSACIG00000006272 #8	fkbp7 (ENSACIG00000006305) #9	ENSACIG00000006316 #9	osgepl1 (ENSACIG00000006320) #10	alkbh6 (ENSACIG00000006337) #11	adat3 (ENSACIG00000006347) #12	SYMPK (ENSACIG00000006357)
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192
Nile tilapia	MODERN SPECIES	7	zgc:136333 (ENSONIG00000007177) #26	ENSONIG00000032736	bcs1l (ENSONIG00000007176) #25	ZNF142 (ENSONIG00000007174) #24	PLCD4 (ENSONIG00000007170) #23	ormdl1 (ENSONIG00000018245) #13	pms1 (ENSONIG00000007164) #14	mstnb (ENSONIG00000007163) #15	ENSONIG00000020754 #16	hibch (ENSONIG00000007161) #17	ENSONIG00000041682	lss (ENSONIG00000016840) #18	ENSONIG00000016836 #19	ybey (ENSONIG00000042756) #20	usp37 (ENSONIG00000016831) #21	cnot9 (ENSONIG00000016830) #22	zgc:136439 (ENSONIG00000038295)	asnsd1 (ENSONIG00000016829)	ENSONIG00000038814	slc40a1 (ENSONIG00000032283)	wdr75 (ENSONIG00000016827)	STAT4 (ENSONIG00000016817) #7	ENSONIG00000040122 #7	ENSONIG00000016812 #8	fkbp7 (ENSONIG00000016810) #9	osgepl1 (ENSONIG00000016808) #10	alkbh6 (ENSONIG00000035409) #11	adat3 (ENSONIG00000021155) #12	SYMPK (ENSONIG00000016802)	SLC35F5 (ENSONIG00000016798)	gpr39 (ENSONIG00000016797)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Burton s mouthbrooder	MODERN SPECIES	544							ormdl1 (ENSHBUG00000022540) #13	pms1 (ENSHBUG00000022546) #14	mstnb (ENSHBUG00000022560) #15	ENSHBUG00000022570 #16	hibch (ENSHBUG00000022595) #17	lss (ENSHBUG00000000696) #18	ENSHBUG00000022726 #19	ybey (ENSHBUG00000022755) #20	usp37 (ENSHBUG00000022775) #21	cnot9 (ENSHBUG00000022819) #22	zgc:136439 (ENSHBUG00000022876)	asnsd1 (ENSHBUG00000022898)	slc40a1 (ENSHBUG00000022927)	wdr75 (ENSHBUG00000023108)	STAT4 (ENSHBUG00000000711) #7	ENSHBUG00000023262 #7	ENSHBUG00000023387 #8	fkbp7 (ENSHBUG00000023447) #9	osgepl1 (ENSHBUG00000023523) #10	alkbh6 (ENSHBUG00000023541) #11	adat3 (ENSHBUG00000023550) #12	SYMPK (ENSHBUG00000023564)	SLC35F5 (ENSHBUG00000023580)	ENSHBUG00000023593	gpr39 (ENSHBUG00000023600)
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
P. nyererei	MODERN SPECIES	366	igfbp5b (ENSPNYG00000012598) #28	TNS1 (ENSPNYG00000012484) #27	zgc:136333 (ENSPNYG00000012405) #26	bcs1l (ENSPNYG00000012374) #25	ZNF142 (ENSPNYG00000012329) #24	PLCD4 (ENSPNYG00000012295) #23	ormdl1 (ENSPNYG00000012277) #13	pms1 (ENSPNYG00000012259) #14	mstnb (ENSPNYG00000012235) #15	ENSPNYG00000012220 #16	hibch (ENSPNYG00000012136) #17	lss (ENSPNYG00000011989) #18	ENSPNYG00000011931 #19	ybey (ENSPNYG00000011909) #20	usp37 (ENSPNYG00000011888) #21	cnot9 (ENSPNYG00000011857) #22	zgc:136439 (ENSPNYG00000011840)	asnsd1 (ENSPNYG00000011819)	slc40a1 (ENSPNYG00000011792)	wdr75 (ENSPNYG00000011767)	STAT4 (ENSPNYG00000011623) #7	ENSPNYG00000011587 #7	ENSPNYG00000011543 #8	fkbp7 (ENSPNYG00000011516) #9	osgepl1 (ENSPNYG00000011500) #10	alkbh6 (ENSPNYG00000011487) #11	adat3 (ENSPNYG00000011478) #12	SYMPK (ENSPNYG00000011455)	SLC35F5 (ENSPNYG00000011426)	ENSPNYG00000011420	gpr39 (ENSPNYG00000011407)
Haplochromini_B	ANCESTRAL SPECIES	39	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #27	ENSGT00950000182905.a.a.a.a.b #26	ENSGT00390000005415 #25	ENSGT00940000163074 #24	ENSGT00940000156180.f #23	ENSGT00950000183178.b.a #13	ENSGT00940000157085 #14	ENSGT00940000165813.b #15	ENSGT00940000167830 #16	ENSGT00890000139491 #17	ENSGT00390000011570 #18	ENSGT00940000156322 #19	ENSGT00950000183170.b.b #20	ENSGT00940000158091 #21	ENSGT00390000001225.s.a #22	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D #7	ENSGT00390000010463.a.b.c.b #8	ENSGT00940000159964 #9	ENSGT00940000153744.A #10	ENSGT00510000048626 #11	ENSGT00390000010706 #12	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a
Zebra mbuna	MODERN SPECIES	1098	TNS1 (ENSMZEG00005014600) #27	ENSMZEG00005014583 #27	zgc:136333 (ENSMZEG00005014558) #26	bcs1l (ENSMZEG00005014547) #25	ZNF142 (ENSMZEG00005014543) #24	PLCD4 (ENSMZEG00005014505) #23	ormdl1 (ENSMZEG00005014486) #13	pms1 (ENSMZEG00005014474) #14	mstnb (ENSMZEG00005014466) #15	ENSMZEG00005014463 #16	hibch (ENSMZEG00005014450) #17	lss (ENSMZEG00005014423) #18	ENSMZEG00005014406 #19	ybey (ENSMZEG00005014396) #20	usp37 (ENSMZEG00005014377) #21	cnot9 (ENSMZEG00005014365) #22	zgc:136439 (ENSMZEG00005014351)	asnsd1 (ENSMZEG00005014348)	slc40a1 (ENSMZEG00005014335)	wdr75 (ENSMZEG00005014322)	STAT4 (ENSMZEG00005014301) #7	ENSMZEG00005014277 #7	ENSMZEG00005014227 #8	fkbp7 (ENSMZEG00005014215) #9	osgepl1 (ENSMZEG00005014198) #10	alkbh6 (ENSMZEG00005014192) #11	adat3 (ENSMZEG00005014189) #12	SYMPK (ENSMZEG00005014146)	SLC35F5 (ENSMZEG00005014127)	ENSMZEG00005014119	gpr39 (ENSMZEG00005014116)
Eastern happy	MODERN SPECIES	7	TNS1 (ENSACLG00000003009) #27	zgc:136333 (ENSACLG00000002973) #26	ENSACLG00000002949	bcs1l (ENSACLG00000002897) #25	ZNF142 (ENSACLG00000002891) #24	PLCD4 (ENSACLG00000002876) #23	ormdl1 (ENSACLG00000002790) #13	pms1 (ENSACLG00000002781) #14	mstnb (ENSACLG00000002763) #15	ENSACLG00000002757 #16	hibch (ENSACLG00000002744) #17	lss (ENSACLG00000002587) #18	ENSACLG00000002461 #19	ybey (ENSACLG00000002438) #20	usp37 (ENSACLG00000002198) #21	cnot9 (ENSACLG00000002163) #22	zgc:136439 (ENSACLG00000002150)	asnsd1 (ENSACLG00000002117)	slc40a1 (ENSACLG00000002052)	wdr75 (ENSACLG00000002025)	STAT4 (ENSACLG00000001992) #7	ENSACLG00000001967 #7	ENSACLG00000001961	ENSACLG00000001867 #8	fkbp7 (ENSACLG00000001857) #9	osgepl1 (ENSACLG00000001841) #10	alkbh6 (ENSACLG00000001836) #11	adat3 (ENSACLG00000001830) #12	SYMPK (ENSACLG00000001813)	SLC35F5 (ENSACLG00000001791)	ENSACLG00000001784
Lyretail cichlid	MODERN SPECIES	485				ZNF142 (ENSNBRG00000019248) #24	PLCD4 (ENSNBRG00000019214) #23	ormdl1 (ENSNBRG00000019200) #13	pms1 (ENSNBRG00000019179) #14	ENSNBRG00000019021 #14	mstnb (ENSNBRG00000018976) #15	ENSNBRG00000018970 #16	hibch (ENSNBRG00000018847) #17	lss (ENSNBRG00000018750) #18	ENSNBRG00000018677 #19	ybey (ENSNBRG00000018657) #20	usp37 (ENSNBRG00000018529) #21	cnot9 (ENSNBRG00000018481) #22	zgc:136439 (ENSNBRG00000018466)	asnsd1 (ENSNBRG00000018455)	slc40a1 (ENSNBRG00000018434)	ENSNBRG00000018422	ENSNBRG00000018406	STAT4 (ENSNBRG00000018367) #7	ENSNBRG00000018353 #7	ENSNBRG00000018284 #8	ENSNBRG00000018243	FKBP7 (ENSNBRG00000018221) #9	osgepl1 (ENSNBRG00000018198) #10	alkbh6 (ENSNBRG00000018188) #11	adat3 (ENSNBRG00000018179) #12	SYMPK (ENSNBRG00000018101)	SLC35F5 (ENSNBRG00000018082)
Tiger tail seahorse	MODERN SPECIES	208	STAT4 (ENSHCOG00000010429) #7	ENSHCOG00000009987 #7	ENSHCOG00000009979 #8	fkbp7 (ENSHCOG00000009934) #9	osgepl1 (ENSHCOG00000009927) #10	alkbh6 (ENSHCOG00000000308) #11	adat3 (ENSHCOG00000000306) #12	ormdl1 (ENSHCOG00000009887) #13	pms1 (ENSHCOG00000009870) #14	mstnb (ENSHCOG00000009683) #15	ENSHCOG00000006942 #16	hibch (ENSHCOG00000006925) #17	lss (ENSHCOG00000006843) #18	ybey (ENSHCOG00000006749) #20	usp37 (ENSHCOG00000006728) #21	cnot9 (ENSHCOG00000006646) #22	PLCD4 (ENSHCOG00000006629) #23	ZNF142 (ENSHCOG00000006596) #24	ENSHCOG00000006583	bcs1l (ENSHCOG00000006571) #25	zgc:136333 (ENSHCOG00000006560) #26	ENSHCOG00000006522	ENSHCOG00000006503	slc39a10 (ENSHCOG00000006465)	tmeff2a (ENSHCOG00000006398)	cavin2a (ENSHCOG00000006383)	nabp1a (ENSHCOG00000006374)	ENSHCOG00000006365	ENSHCOG00000006343	CTDSP1 (ENSHCOG00000006267)	ENSHCOG00000006245
Pinecone sodierfish	MODERN SPECIES	13	asnsd1 (ENSMMDG00005020624)	zgc:136439 (ENSMMDG00005020632)	SYMPK (ENSMMDG00005020669)	osgepl1 (ENSMMDG00005021222) #10	adat3 (ENSMMDG00005021224) #12	alkbh6 (ENSMMDG00005021227) #11	ormdl1 (ENSMMDG00005021231) #13	pms1 (ENSMMDG00005021239) #14	mstnb (ENSMMDG00005021255) #15	ENSMMDG00005021258 #16	hibch (ENSMMDG00005021269) #17	lss (ENSMMDG00005021518) #18	ENSMMDG00005021757 #19	ybey (ENSMMDG00005021764) #20	usp37 (ENSMMDG00005021787) #21	cnot9 (ENSMMDG00005021915) #22	PLCD4 (ENSMMDG00005021923) #23	ZNF142 (ENSMMDG00005021928) #24	bcs1l (ENSMMDG00005021930) #25	zgc:136333 (ENSMMDG00005013527) #26	TNS1 (ENSMMDG00005013571) #27	igfbp5b (ENSMMDG00005013723) #28	igfbp2b (ENSMMDG00005013726) #29	ENSMMDG00005013730	slc4a3 (ENSMMDG00005013733) #30	COL5A2 (ENSMMDG00005013736) #31	gulp1a (ENSMMDG00005013737) #32	ENSMMDG00005013741 #33	ENSMMDG00005013745 #34	ENSMMDG00005013748 #37	lrrc3 (ENSMMDG00005013749)