Amniota	ANCESTRAL SPECIES	224																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Mammalia	ANCESTRAL SPECIES	42	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24
Theria	ANCESTRAL SPECIES	29	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT01100000263561.C	ENSGT00940000162906.c.a	ENSGT00940000155021.n	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000162790.a
Eutheria	ANCESTRAL SPECIES	27	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000164424	ENSGT00950000183069.b	ENSGT00940000164720	ENSGT00950000183216.c.b.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29
Primates	ANCESTRAL SPECIES	18	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523	ENSGT00950000183216.d	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912.e	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234	ENSGT00940000162086
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912.e	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912.e	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Capuchin	MODERN SPECIES	806																TECR (ENSCCAG00000021045) #22	NDUFB7 (ENSCCAG00000035121) #23	CLEC17A (ENSCCAG00000021012) #24	ADGRE3 (ENSCCAG00000027258) #25	ZNF333 (ENSCCAG00000013594) #26	SLC1A6 (ENSCCAG00000020973) #27	CCDC105 (ENSCCAG00000011402) #28	CASP14 (ENSCCAG00000023383) #29
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	192	RLN3 (ENSSBOG00000034704)	IL27RA (ENSSBOG00000034131)	PALM3 (ENSSBOG00000029866)	ENSSBOG00000032680	ENSSBOG00000031891	ENSSBOG00000029114	PRKACA (ENSSBOG00000028189)	ASF1B (ENSSBOG00000023101)	ADGRL1 (ENSSBOG00000032464)	ADGRE5 (ENSSBOG00000000810)	DDX39A (ENSSBOG00000034939)	PKN1 (ENSSBOG00000030578)	ENSSBOG00000026379	GIPC1 (ENSSBOG00000021931)	DNAJB1 (ENSSBOG00000032537)	ENSSBOG00000029630 #22	NDUFB7 (ENSSBOG00000027435) #23	CLEC17A (ENSSBOG00000034229) #24	ADGRE3 (ENSSBOG00000023661) #25	ZNF333 (ENSSBOG00000009921) #26	OR7C2 (ENSSBOG00000025219)	SLC1A6 (ENSSBOG00000033066) #27	CCDC105 (ENSSBOG00000027944) #28	CASP14 (ENSSBOG00000026627) #29	ENSSBOG00000021706
Bolivian squirrel monkey	MODERN SPECIES	89	UGT2A3 (ENSSBOG00000025330)	ENSSBOG00000023719	TMPRSS11E (ENSSBOG00000004412)	YTHDC1 (ENSSBOG00000022353)	TMPRSS11B (ENSSBOG00000030405)	TMPRSS11F (ENSSBOG00000022595)	TMPRSS11A (ENSSBOG00000007192)	TMPRSS11D (ENSSBOG00000034617)	GNRHR (ENSSBOG00000035863)	ENSSBOG00000033450	UBA6 (ENSSBOG00000022042)	STAP1 (ENSSBOG00000017405)	CENPC (ENSSBOG00000029798)	ENSSBOG00000030946	ENSSBOG00000023200	ENSSBOG00000032386 #22	EPHA5 (ENSSBOG00000022980)	TECRL (ENSSBOG00000033899) ##22	ENSSBOG00000024556	ENSSBOG00000018398	ENSSBOG00000034343
Marmoset	MODERN SPECIES	14	RLN3 (ENSCJAG00000004965)	IL27RA (ENSCJAG00000004940)	PALM3 (ENSCJAG00000004935)	MISP3 (ENSCJAG00000004926)	C19orf67 (ENSCJAG00000004924)	SAMD1 (ENSCJAG00000035248)	PRKACA (ENSCJAG00000004906)	ASF1B (ENSCJAG00000004898)	ADGRL1 (ENSCJAG00000004850)	ADGRE5 (ENSCJAG00000054003)	DDX39A (ENSCJAG00000004760)	PKN1 (ENSCJAG00000004713)	PTGER1 (ENSCJAG00000004706)	GIPC1 (ENSCJAG00000004679)	DNAJB1 (ENSCJAG00000004666)	TECR (ENSCJAG00000004626) #22	NDUFB7 (ENSCJAG00000004611) #23	ADGRE3 (ENSCJAG00000004557) #25	ZNF333 (ENSCJAG00000004543) #26	ENSCJAG00000004537	ENSCJAG00000054592	OR7C2 (ENSCJAG00000046592)	SLC1A6 (ENSCJAG00000004498) #27	CCDC105 (ENSCJAG00000004489) #28	CASP14 (ENSCJAG00000004476) #29	CYP4F22 (ENSCJAG00000041905)	WIZ (ENSCJAG00000002265)	RASAL3 (ENSCJAG00000002291)	AKAP8L (ENSCJAG00000002227)	AKAP8 (ENSCJAG00000002212)	BRD4 (ENSCJAG00000002178)
Mas night monkey	MODERN SPECIES	251	RLN3 (ENSANAG00000028354)	IL27RA (ENSANAG00000028857)	ENSANAG00000027531	ENSANAG00000028790	C19orf67 (ENSANAG00000021995)	SAMD1 (ENSANAG00000036958)	PRKACA (ENSANAG00000024197)	ASF1B (ENSANAG00000034025)	ADGRL1 (ENSANAG00000034947)	ADGRE5 (ENSANAG00000033446)	ENSANAG00000036829	PKN1 (ENSANAG00000030511)	PTGER1 (ENSANAG00000034925)	GIPC1 (ENSANAG00000032969)	DNAJB1 (ENSANAG00000031367)	TECR (ENSANAG00000030591) #22	NDUFB7 (ENSANAG00000037513) #23	CLEC17A (ENSANAG00000032640) #24	ADGRE3 (ENSANAG00000018923) #25	ZNF333 (ENSANAG00000027468) #26	SLC1A6 (ENSANAG00000026318) #27	CCDC105 (ENSANAG00000030541) #28	CASP14 (ENSANAG00000027858) #29	ENSANAG00000037637	SYDE1 (ENSANAG00000022113)	ILVBL (ENSANAG00000031737)	NOTCH3 (ENSANAG00000021084)	EPHX3 (ENSANAG00000026368)	BRD4 (ENSANAG00000037505)	AKAP8 (ENSANAG00000036569)	AKAP8L (ENSANAG00000036794)
Catarrhini	DUPLICATION
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	113																ENSGT00950000182886.a.a.b.o.a #22	ENSGT00940000168162
Hominoidea	ANCESTRAL SPECIES	125																ENSGT00950000182886.a.a.b.o.a #22	ENSGT00940000168162
Gibbon	MODERN SPECIES		DCAF15 (ENSNLEG00000013221)	RFX1 (ENSNLEG00000013294)	IL27RA (ENSNLEG00000013354)	PALM3 (ENSNLEG00000013390)	ENSNLEG00000013397	C19orf67 (ENSNLEG00000013407)	ENSNLEG00000013417	ASF1B (ENSNLEG00000036282)	ADGRL1 (ENSNLEG00000033463)	ADGRE5 (ENSNLEG00000013491)	DDX39A (ENSNLEG00000013515)	PTGER1 (ENSNLEG00000013538)	ENSNLEG00000013522	ENSNLEG00000013539	ENSNLEG00000030825	TECR (ENSNLEG00000013546) #22	ENSNLEG00000013719	ENSNLEG00000032413 #24	ADGRE3 (ENSNLEG00000005125) #25	ZNF333 (ENSNLEG00000005137) #26	ENSNLEG00000029491	ENSNLEG00000033650	ENSNLEG00000005164 #27	CCDC105 (ENSNLEG00000005171) #28	ENSNLEG00000005163	SYDE1 (ENSNLEG00000005186)	ILVBL (ENSNLEG00000005203)	NOTCH3 (ENSNLEG00000031319)	EPHX3 (ENSNLEG00000005217)	BRD4 (ENSNLEG00000005233)	AKAP8 (ENSNLEG00000005263)
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.a #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.a #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.a #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.a #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.a #22
Sooty mangabey	MODERN SPECIES	237												ENSCATG00000032877	ENSCATG00000033968	FAT4 (ENSCATG00000020876)	ANKRD50 (ENSCATG00000035795)	ENSCATG00000029816 #22	SPRY1 (ENSCATG00000043203)	SPATA5 (ENSCATG00000036389)	ENSCATG00000036593	NUDT6 (ENSCATG00000032521)	FGF2 (ENSCATG00000005275)	ENSCATG00000039523	IL21 (ENSCATG00000031644)	IL2 (ENSCATG00000034693)	ADAD1 (ENSCATG00000023127)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.o.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.j	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.a.a.a.a.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.o.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.j	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.a.a.a.a.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Pan	ANCESTRAL SPECIES	14	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.o.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.j	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.a.a.a.a.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT01030000234635.a.a.a.b
Chimpanzee	MODERN SPECIES	10	IL27RA (ENSPTRG00000010578)	PALM3 (ENSPTRG00000010579)	ENSPTRG00000010581	C19H19orf67 (ENSPTRG00000010582)	SAMD1 (ENSPTRG00000010583)	PRKACA (ENSPTRG00000010585)	ASF1B (ENSPTRG00000010586)	ADGRL1 (ENSPTRG00000010588)	ENSPTRG00000050521	ADGRE5 (ENSPTRG00000010589)	DDX39A (ENSPTRG00000010590)	PKN1 (ENSPTRG00000010591)	PTGER1 (ENSPTRG00000045625)	GIPC1 (ENSPTRG00000010593)	DNAJB1 (ENSPTRG00000010594)	TECR (ENSPTRG00000010595) #22	NDUFB7 (ENSPTRG00000010596) #23	CLEC17A (ENSPTRG00000010597) #24	ADGRE3 (ENSPTRG00000010598) #25	ZNF333 (ENSPTRG00000010599) #26	ADGRE2 (ENSPTRG00000010601)	OR7C1 (ENSPTRG00000048237)	OR7A5 (ENSPTRG00000045068)	OR7A10 (ENSPTRG00000010604)	ENSPTRG00000049200	ENSPTRG00000010605	OR7C2 (ENSPTRG00000046680)	SLC1A6 (ENSPTRG00000010609) #27	CCDC105 (ENSPTRG00000010610) #28	CASP14 (ENSPTRG00000039410) #29	SYDE1 (ENSPTRG00000010613)
Bonobo	MODERN SPECIES	10	RFX1 (ENSPPAG00000029817)	RLN3 (ENSPPAG00000022669)	IL27RA (ENSPPAG00000037229)	PALM3 (ENSPPAG00000039534)	ENSPPAG00000021210	C19orf67 (ENSPPAG00000038468)	ENSPPAG00000029269	PRKACA (ENSPPAG00000014020)	ASF1B (ENSPPAG00000024377)	ADGRL1 (ENSPPAG00000024209)	ADGRE5 (ENSPPAG00000043912)	DDX39A (ENSPPAG00000040065)	PKN1 (ENSPPAG00000039292)	GIPC1 (ENSPPAG00000041834)	DNAJB1 (ENSPPAG00000030563)	TECR (ENSPPAG00000031488) #22	NDUFB7 (ENSPPAG00000043940) #23	CLEC17A (ENSPPAG00000035812) #24	ADGRE3 (ENSPPAG00000033302) #25	ZNF333 (ENSPPAG00000028875) #26	ADGRE2 (ENSPPAG00000044011)	OR7C1 (ENSPPAG00000023546)	OR7A5 (ENSPPAG00000009243)	OR7A10 (ENSPPAG00000008015)	ENSPPAG00000031313	ENSPPAG00000012540	OR7A17 (ENSPPAG00000019424)	OR7C2 (ENSPPAG00000016589)	SLC1A6 (ENSPPAG00000042819) #27	CCDC105 (ENSPPAG00000019113) #28	CASP14 (ENSPPAG00000030191) #29
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.o.b #22
Sooty mangabey	MODERN SPECIES	347	RLN3 (ENSCATG00000040582)	IL27RA (ENSCATG00000041637)	PALM3 (ENSCATG00000044550)	MISP3 (ENSCATG00000044272)	C19orf67 (ENSCATG00000044669)	SAMD1 (ENSCATG00000044018)	PRKACA (ENSCATG00000044336)	ASF1B (ENSCATG00000044100)	ADGRL1 (ENSCATG00000042135)	ADGRE5 (ENSCATG00000039127)	DDX39A (ENSCATG00000044440)	PKN1 (ENSCATG00000031225)	PTGER1 (ENSCATG00000040988)	GIPC1 (ENSCATG00000041252)	DNAJB1 (ENSCATG00000042394)	ENSCATG00000043025 #22	NDUFB7 (ENSCATG00000033707) #23	CLEC17A (ENSCATG00000033974) #24	ADGRE3 (ENSCATG00000032364) #25	ZNF333 (ENSCATG00000038104) #26	ADGRE2 (ENSCATG00000031382)	ENSCATG00000022243	ENSCATG00000006773	SLC1A6 (ENSCATG00000017966) #27	CCDC105 (ENSCATG00000037737) #28	CASP14 (ENSCATG00000032046) #29	SYDE1 (ENSCATG00000041995)	ILVBL (ENSCATG00000043839)	NOTCH3 (ENSCATG00000043609)	EPHX3 (ENSCATG00000038217)	BRD4 (ENSCATG00000003569)
Catarrhini	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000162084	ENSGT00940000153523.i.a.a.a	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000162084	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a
Black snub-nosed monkey	MODERN SPECIES	1520	RLN3 (ENSRBIG00000022931)	IL27RA (ENSRBIG00000030882)	PALM3 (ENSRBIG00000035709)	MISP3 (ENSRBIG00000029000)	C19orf67 (ENSRBIG00000036921)	SAMD1 (ENSRBIG00000014470)	PRKACA (ENSRBIG00000030568)	ASF1B (ENSRBIG00000031074)	ADGRL1 (ENSRBIG00000043709)	ADGRE5 (ENSRBIG00000027106)	DDX39A (ENSRBIG00000036352)	PKN1 (ENSRBIG00000037783)	PTGER1 (ENSRBIG00000039678)	GIPC1 (ENSRBIG00000032760)	DNAJB1 (ENSRBIG00000034353)	TECR (ENSRBIG00000041354) #22	NDUFB7 (ENSRBIG00000031301) #23	CLEC17A (ENSRBIG00000037958) #24	ADGRE3 (ENSRBIG00000039789) #25	ZNF333 (ENSRBIG00000033000) #26
Golden snub-nosed monkey	MODERN SPECIES	975	RLN3 (ENSRROG00000032423)	IL27RA (ENSRROG00000036450)	PALM3 (ENSRROG00000032410)	ENSRROG00000021104	C19orf67 (ENSRROG00000045746)	SAMD1 (ENSRROG00000043288)	PRKACA (ENSRROG00000030096)	ASF1B (ENSRROG00000032473)	ADGRL1 (ENSRROG00000041016)	ADGRE5 (ENSRROG00000036165)	DDX39A (ENSRROG00000027985)	PKN1 (ENSRROG00000014720)	PTGER1 (ENSRROG00000035503)	GIPC1 (ENSRROG00000031568)	DNAJB1 (ENSRROG00000035637)	TECR (ENSRROG00000040562) #22	NDUFB7 (ENSRROG00000034917) #23	CLEC17A (ENSRROG00000044946) #24	ADGRE3 (ENSRROG00000031351) #25	ZNF333 (ENSRROG00000039295) #26	ADGRE2 (ENSRROG00000034860)	SLC1A6 (ENSRROG00000035827) #27	CCDC105 (ENSRROG00000042820) #28	CASP14 (ENSRROG00000041680) #29	SYDE1 (ENSRROG00000034672)	ILVBL (ENSRROG00000045749)	NOTCH3 (ENSRROG00000044242)	EPHX3 (ENSRROG00000044137)	BRD4 (ENSRROG00000045546)	AKAP8 (ENSRROG00000031442)	AKAP8L (ENSRROG00000031937)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000162084	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Vervet Monkey	MODERN SPECIES	25	RLN3 (ENSCSAG00000006390)	IL27RA (ENSCSAG00000006388)	PALM3 (ENSCSAG00000006381)	MISP3 (ENSCSAG00000006375)	C19orf67 (ENSCSAG00000006372)	PRKACA (ENSCSAG00000006367)	SAMD1 (ENSCSAG00000006358)	ASF1B (ENSCSAG00000006355)	ADGRL1 (ENSCSAG00000006349)	ADGRE5 (ENSCSAG00000006346)	DDX39A (ENSCSAG00000006342)	PKN1 (ENSCSAG00000006339)	PTGER1 (ENSCSAG00000006336)	GIPC1 (ENSCSAG00000006331)	DNAJB1 (ENSCSAG00000006329)	TECR (ENSCSAG00000006324) #22	NDUFB7 (ENSCSAG00000006318) #23	CLEC17A (ENSCSAG00000006309) #24	ADGRE3 (ENSCSAG00000006290) #25	ZNF333 (ENSCSAG00000006261) #26	ADGRE2 (ENSCSAG00000006232)	OR7C1 (ENSCSAG00000018477)	OR7A10 (ENSCSAG00000006193)	ENSCSAG00000018479	ENSCSAG00000018482	OR7C2 (ENSCSAG00000018486)	SLC1A6 (ENSCSAG00000006189) #27	CCDC105 (ENSCSAG00000006179) #28	CASP14 (ENSCSAG00000006173) #29	OR1I1 (ENSCSAG00000018488)	SYDE1 (ENSCSAG00000006166)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000162084	ENSGT00940000153523.i.a.b	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.a.a.b	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234	ENSGT00940000162086
Drill	MODERN SPECIES	833	RLN3 (ENSMLEG00000043479)	PALM3 (ENSMLEG00000031068)	ENSMLEG00000032173	C19orf67 (ENSMLEG00000042564)	SAMD1 (ENSMLEG00000032102)	PRKACA (ENSMLEG00000034529)	ASF1B (ENSMLEG00000037143)	ENSMLEG00000039513	ADGRL1 (ENSMLEG00000040752)	ADGRE5 (ENSMLEG00000014705)	DDX39A (ENSMLEG00000007602)	PKN1 (ENSMLEG00000010292)	PTGER1 (ENSMLEG00000043291)	GIPC1 (ENSMLEG00000042964)	DNAJB1 (ENSMLEG00000037135)	TECR (ENSMLEG00000033027) #22	NDUFB7 (ENSMLEG00000039086) #23	CLEC17A (ENSMLEG00000044009) #24	ADGRE3 (ENSMLEG00000038433) #25	ZNF333 (ENSMLEG00000031998) #26	ENSMLEG00000037919
Olive baboon	MODERN SPECIES	12	DCAF15 (ENSPANG00000011700)	RFX1 (ENSPANG00000009789)	ENSPANG00000005369	IL27RA (ENSPANG00000015627)	PALM3 (ENSPANG00000005117)	MISP3 (ENSPANG00000001631)	C19orf67 (ENSPANG00000019962)	ENSPANG00000014189	PRKACA (ENSPANG00000018288)	ASF1B (ENSPANG00000031048)	ADGRL1 (ENSPANG00000007386)	PKN1 (ENSPANG00000004240)	PTGER1 (ENSPANG00000010976)	GIPC1 (ENSPANG00000008550)	DNAJB1 (ENSPANG00000015164)	TECR (ENSPANG00000004446) #22	NDUFB7 (ENSPANG00000011699) #23	CLEC17A (ENSPANG00000026252) #24	ADGRE3 (ENSPANG00000019561) #25	DDX39A (ENSPANG00000015036)	ENSPANG00000049867	ZNF333 (ENSPANG00000029285) #26	ADGRE2 (ENSPANG00000011401)	OR7C1 (ENSPANG00000050573)	ENSPANG00000008166	ENSPANG00000046221	OR7C2 (ENSPANG00000042632)	SLC1A6 (ENSPANG00000017791) #27	CCDC105 (ENSPANG00000010975) #28	CASP14 (ENSPANG00000003163) #29	OR1I1 (ENSPANG00000039991)
Macaca	ANCESTRAL SPECIES	21	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234
Pig-tailed macaque	MODERN SPECIES	76	IL27RA (ENSMNEG00000044658)	PALM3 (ENSMNEG00000039886)	MISP3 (ENSMNEG00000043349)	C19orf67 (ENSMNEG00000035055)	SAMD1 (ENSMNEG00000014090)	PRKACA (ENSMNEG00000043476)	ASF1B (ENSMNEG00000028854)	ENSMNEG00000030430	ADGRL1 (ENSMNEG00000012530)	ADGRE5 (ENSMNEG00000027579)	DDX39A (ENSMNEG00000044292)	PKN1 (ENSMNEG00000018025)	PTGER1 (ENSMNEG00000029342)	GIPC1 (ENSMNEG00000044957)	DNAJB1 (ENSMNEG00000010488)	TECR (ENSMNEG00000041758) #22	NDUFB7 (ENSMNEG00000035902) #23	CLEC17A (ENSMNEG00000040251) #24	ZNF333 (ENSMNEG00000045472) #26	ADGRE2 (ENSMNEG00000044437)	ENSMNEG00000000074	ENSMNEG00000028698	OR7A5 (ENSMNEG00000023698)	SLC1A6 (ENSMNEG00000038083) #27	CCDC105 (ENSMNEG00000035529) #28	CASP14 (ENSMNEG00000036154) #29	SYDE1 (ENSMNEG00000043619)	ILVBL (ENSMNEG00000045029)	NOTCH3 (ENSMNEG00000034126)	EPHX3 (ENSMNEG00000036655)	BRD4 (ENSMNEG00000030222)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.b	ENSGT00950000183216.d	ENSGT00940000153523.j	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207.a #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234
Rhesus	MODERN SPECIES	10	ENSMMUG00000061407	MISP3 (ENSMMUG00000059667)	C19H19orf67 (ENSMMUG00000045865)	ENSMMUG00000058960	PRKACA (ENSMMUG00000014132)	ASF1B (ENSMMUG00000014135)	ADGRL1 (ENSMMUG00000014137)	ENSMMUG00000051365	ADGRE5 (ENSMMUG00000005722)	DDX39A (ENSMMUG00000005723)	PKN1 (ENSMMUG00000005727)	PTGER1 (ENSMMUG00000005728)	GIPC1 (ENSMMUG00000005729)	DNAJB1 (ENSMMUG00000017906)	ENSMMUG00000055621	TECR (ENSMMUG00000021611) #22	NDUFB7 (ENSMMUG00000050251) #23	CLEC17A (ENSMMUG00000021892) #24	ADGRE2 (ENSMMUG00000018932)	ZNF333 (ENSMMUG00000020653) #26	ENSMMUG00000060289	OR7C1 (ENSMMUG00000053889)	OR7A10 (ENSMMUG00000050032)	ENSMMUG00000063342	ENSMMUG00000064639	ENSMMUG00000058217	OR7C2 (ENSMMUG00000059377)	SLC1A6 (ENSMMUG00000001735) #27	ENSMMUG00000013758 #28	CASP14 (ENSMMUG00000053457) #29	OR1I1 (ENSMMUG00000053220)
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.a.b	ENSGT00950000183216.d	ENSGT00940000153523.i.a.a.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035
Gibbon	MODERN SPECIES	408																ENSNLEG00000029818 #22
Hominidae	ANCESTRAL SPECIES		ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312.e	ENSGT00950000182886.a.a.b.p #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.i.a.b	ENSGT00950000183216.d	ENSGT00940000153523.i.a.a.a.a.a	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.p #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b.p #22
Human	MODERN SPECIES	10	IL27RA (ENSG00000104998)	PALM3 (ENSG00000187867)	MISP3 (ENSG00000141854)	C19orf67 (ENSG00000188032)	SAMD1 (ENSG00000141858)	PRKACA (ENSG00000072062)	SMIM46 (ENSG00000289762)	ASF1B (ENSG00000105011)	ADGRL1 (ENSG00000072071)	ADGRE5 (ENSG00000123146)	DDX39A (ENSG00000123136)	PKN1 (ENSG00000123143)	PTGER1 (ENSG00000160951)	GIPC1 (ENSG00000123159)	DNAJB1 (ENSG00000132002)	TECR (ENSG00000099797) #22	NDUFB7 (ENSG00000099795) #23	CLEC17A (ENSG00000187912) #24	ADGRE3 (ENSG00000131355) #25	ZNF333 (ENSG00000160961) #26	ADGRE2 (ENSG00000127507)	OR7C1 (ENSG00000127530)	OR7A5 (ENSG00000188269)	OR7A10 (ENSG00000127515)	OR7A17 (ENSG00000185385)	OR7C2 (ENSG00000127529)	SLC1A6 (ENSG00000105143) #27	CCDC105 (ENSG00000160994) #28	CASP14 (ENSG00000105141) #29	OR1I1 (ENSG00000094661)	SYDE1 (ENSG00000105137)
Gorilla	MODERN SPECIES	479																ENSGGOG00000041066 #22
Orangutan	MODERN SPECIES	10	IL27RA (ENSPPYG00000009633)	PALM3 (ENSPPYG00000009634)	ENSPPYG00000009635	C19orf67 (ENSPPYG00000009636)	ENSPPYG00000009637	PRKACA (ENSPPYG00000009638)	ENSPPYG00000009639	ENSPPYG00000009640	ENSPPYG00000009641	DDX39A (ENSPPYG00000009642)	PKN1 (ENSPPYG00000009643)	PTGER1 (ENSPPYG00000009644)	GIPC1 (ENSPPYG00000009645)	ENSPPYG00000009646	DNAJB1 (ENSPPYG00000009647)	TECR (ENSPPYG00000009648) #22	NDUFB7 (ENSPPYG00000009649) #23	CLEC17A (ENSPPYG00000009650) #24	ADGRE3 (ENSPPYG00000009651) #25	ZNF333 (ENSPPYG00000009652) #26	ADGRE2 (ENSPPYG00000009654)	OR7A10 (ENSPPYG00000009656)	ENSPPYG00000035025	OR7A17 (ENSPPYG00000037032)	ENSPPYG00000039427	ENSPPYG00000039880	ENSPPYG00000036745	SLC1A6 (ENSPPYG00000009662) #27	CCDC105 (ENSPPYG00000009663) #28	CASP14 (ENSPPYG00000009664) #29	OR1I1 (ENSPPYG00000009665)
Tarsier	MODERN SPECIES	4678														GIPC1 (ENSTSYG00000035024)	DNAJB1 (ENSTSYG00000030085)	TECR (ENSTSYG00000033874) #22	NDUFB7 (ENSTSYG00000006917) #23	CLEC17A (ENSTSYG00000035604) #24	ADGRE3 (ENSTSYG00000011359) #25	ZNF333 (ENSTSYG00000010668) #26
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000153523.g
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597
Mouse lemur	MODERN SPECIES	16	RLN3 (ENSMICG00000035223)	IL27RA (ENSMICG00000003469)	MISP3 (ENSMICG00000046673)	C19orf67 (ENSMICG00000008731)	SAMD1 (ENSMICG00000030168)	PRKACA (ENSMICG00000036023)	ASF1B (ENSMICG00000000574)	ADGRL1 (ENSMICG00000027529)	ENSMICG00000032629	ENSMICG00000046227	DDX39A (ENSMICG00000015325)	PKN1 (ENSMICG00000035009)	PTGER1 (ENSMICG00000045048)	GIPC1 (ENSMICG00000004336)	DNAJB1 (ENSMICG00000047161)	TECR (ENSMICG00000009818) #22	NDUFB7 (ENSMICG00000043903) #23	CLEC17A (ENSMICG00000011080) #24	ADGRE3 (ENSMICG00000011089) #25	ZNF333 (ENSMICG00000029549) #26	ENSMICG00000014240	ENSMICG00000042907	ENSMICG00000000327	F2RL3 (ENSMICG00000027121)	SIN3B (ENSMICG00000003468)	NWD1 (ENSMICG00000003445)	TMEM38A (ENSMICG00000044609)	SMIM7 (ENSMICG00000047863)	MED26 (ENSMICG00000030425)	SLC35E1 (ENSMICG00000004587)	CHERP (ENSMICG00000004577)
Lemuriformes_a	ANCESTRAL SPECIES	271																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597
Coquerels sifaka	MODERN SPECIES	267		OTUD4 (ENSPCOG00000024062)	ABCE1 (ENSPCOG00000028022)	ANAPC10 (ENSPCOG00000019031)	HHIP (ENSPCOG00000019323)	ENSPCOG00000020754	FREM3 (ENSPCOG00000028758)	SMARCA5 (ENSPCOG00000026744)	GAB1 (ENSPCOG00000018531)	USP38 (ENSPCOG00000027643)	ENSPCOG00000013141	INPP4B (ENSPCOG00000015413)	IL15 (ENSPCOG00000020910)	ZNF330 (ENSPCOG00000019805)	RNF150 (ENSPCOG00000016876)	TECR (ENSPCOG00000023638) #22	NDUFB7 (ENSPCOG00000024695) #23	ENSPCOG00000024825 #24	ENSPCOG00000014152	ADGRE3 (ENSPCOG00000014538) #25	ZNF333 (ENSPCOG00000016442) #26	ADGRE2 (ENSPCOG00000027244)
Greater bamboo lemur	MODERN SPECIES	1019																ENSPSMG00000012687 #22	NDUFB7 (ENSPSMG00000012701) #23	CLEC17A (ENSPSMG00000012710) #24	ADGRE3 (ENSPSMG00000012747) #25
Bushbaby	MODERN SPECIES	242	RLN3 (ENSOGAG00000002457)	IL27RA (ENSOGAG00000002458)	PALM3 (ENSOGAG00000031926)	MISP3 (ENSOGAG00000002460)	C19orf67 (ENSOGAG00000002463)	SAMD1 (ENSOGAG00000032909)	PRKACA (ENSOGAG00000011842)	ASF1B (ENSOGAG00000005034)	ADGRL1 (ENSOGAG00000005032)	ADGRE5 (ENSOGAG00000010273)	ENSOGAG00000010280	PKN1 (ENSOGAG00000010285)	PTGER1 (ENSOGAG00000033700)	GIPC1 (ENSOGAG00000014019)	DNAJB1 (ENSOGAG00000014022)	TECR (ENSOGAG00000024886) #22	NDUFB7 (ENSOGAG00000009615) #23	CLEC17A (ENSOGAG00000004648) #24	ADGRE3 (ENSOGAG00000002255) #25	ZNF333 (ENSOGAG00000028879) #26
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00950000183216.d	ENSGT00940000153523	ENSGT00940000164424	ENSGT00950000183069.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000164720	ENSGT00950000183216.c.b.a	ENSGT00940000162084	ENSGT00940000159972 #27
Glires	ANCESTRAL SPECIES	21	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161.h #26	ENSGT00940000162597	ENSGT00950000183216.d.k	ENSGT00940000153523.a	ENSGT00950000183216.d.j.a	ENSGT00940000153523.b	ENSGT00950000183216.d.j.b	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Lagomorpha	ANCESTRAL SPECIES	476																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24
Pika	MODERN SPECIES	5199																ENSOPRG00000013424 #22	NDUFB7 (ENSOPRG00000013445) #23	ENSOPRG00000013455 #24
Rodentia	ANCESTRAL SPECIES	17	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000163161.h #26	ENSGT00940000162597	ENSGT00950000183216.d.j.a.a.b.a.a	ENSGT00950000183216.d.j.a.a.b.a.b	ENSGT00940000153523.a	ENSGT00950000183216.d.j.a.a.a	ENSGT00940000153523.b	ENSGT00950000183216.d.j.b	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Rodentia_B	ANCESTRAL SPECIES	43	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Kangaroo rat	MODERN SPECIES	502	Zswim4 (ENSDORG00000016139)	Cc2d1a (ENSDORG00000016499)	Rfx1 (ENSDORG00000016506)	Rln3 (ENSDORG00000013264)	Il27ra (ENSDORG00000013261)	1700067K01Rik (ENSDORG00000027830)	Prkaca (ENSDORG00000014936)	Asf1b (ENSDORG00000029005)	ENSDORG00000014805	ENSDORG00000029791	Adgre5 (ENSDORG00000013039)	Ddx39a (ENSDORG00000013041)	Pkn1 (ENSDORG00000012299)	ENSDORG00000015209	Dnajb1 (ENSDORG00000015210)	Tecr (ENSDORG00000015212) #22	Ndufb7 (ENSDORG00000015213) #23
Myomorpha	ANCESTRAL SPECIES	52	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Lesser Egyptian jerboa	MODERN SPECIES	286										ENSJJAG00000005307	ENSJJAG00000004337	Pkn1 (ENSJJAG00000002998)	Ptger1 (ENSJJAG00000002161)	Gipc1 (ENSJJAG00000002060)	Dnajb1 (ENSJJAG00000002024)	Tecr (ENSJJAG00000001707) #22	ENSJJAG00000001246 #23
Muroidea	ANCESTRAL SPECIES	60	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Upper Galilee mountains blind mole rat	MODERN SPECIES	1738	Palm3 (ENSNGAG00000000694)	Misp3 (ENSNGAG00000007990)	1700067K01Rik (ENSNGAG00000022697)	Samd1 (ENSNGAG00000014280)	Prkaca (ENSNGAG00000004941)	Asf1b (ENSNGAG00000019502)	ENSNGAG00000021731	Adgrl1 (ENSNGAG00000013398)	Adgre5 (ENSNGAG00000021625)	Ddx39a (ENSNGAG00000010734)	Pkn1 (ENSNGAG00000018524)	Ptger1 (ENSNGAG00000015906)	Gipc1 (ENSNGAG00000001250)	Dnajb1 (ENSNGAG00000023791)	ENSNGAG00000023511	Tecr (ENSNGAG00000018503) #22	Ndufb7 (ENSNGAG00000017720) #23	ENSNGAG00000003478
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403	ENSGT00940000156801
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733
Cricetinae	ANCESTRAL SPECIES	40	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733	ENSGT00940000158660	ENSGT00390000013722
Chinese hamster chok1gshd	MODERN SPECIES	347	Il27ra (ENSCGRG00001019895)	Palm3 (ENSCGRG00001015020)	Misp3 (ENSCGRG00001015443)	1700067K01Rik (ENSCGRG00001015825)	Samd1 (ENSCGRG00001016469)	PRKACA (ENSCGRG00001017184)	Asf1b (ENSCGRG00001018098)	Adgrl1 (ENSCGRG00001022080)	ENSCGRG00001000091	Adgre5 (ENSCGRG00001000548)	Ddx39a (ENSCGRG00001001611)	Pkn1 (ENSCGRG00001009026)	Ptger1 (ENSCGRG00001012182)	Gipc1 (ENSCGRG00001013034)	Dnajb1 (ENSCGRG00001013728)	Tecr (ENSCGRG00001016685) #22	Ndufb7 (ENSCGRG00001019688) #23
Golden Hamster	MODERN SPECIES	692																Tecr (ENSMAUG00000016937) #22	Ndufb7 (ENSMAUG00000000462) #23	ENSMAUG00000011485	Clgn (ENSMAUG00000018981)	Mgat4d (ENSMAUG00000008813)	Elmod2 (ENSMAUG00000017426)	Ucp1 (ENSMAUG00000001700)	Tbc1d9 (ENSMAUG00000007342)	ENSMAUG00000000314	ENSMAUG00000003125	Inpp4b (ENSMAUG00000006303)	Usp38 (ENSMAUG00000015498)	Gab1 (ENSMAUG00000009430)	Smarca5 (ENSMAUG00000015902)	Hhip (ENSMAUG00000012341)	ENSMAUG00000014510
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733
Prairie vole	MODERN SPECIES	173	Palm3 (ENSMOCG00000019944)	Misp3 (ENSMOCG00000012756)	1700067K01Rik (ENSMOCG00000012915)	ENSMOCG00000000409	Prkaca (ENSMOCG00000009319)	Asf1b (ENSMOCG00000019691)	ENSMOCG00000016743	Adgrl1 (ENSMOCG00000019230)	Adgre5 (ENSMOCG00000015102)	Ddx39a (ENSMOCG00000016890)	Pkn1 (ENSMOCG00000001118)	Ptger1 (ENSMOCG00000012350)	Gipc1 (ENSMOCG00000008417)	ENSMOCG00000017692	ENSMOCG00000016066	Tecr (ENSMOCG00000018776) #22	Ndufb7 (ENSMOCG00000012007) #23
Northern American deer mouse	MODERN SPECIES	18	Il27ra (ENSPEMG00000011917)	Palm3 (ENSPEMG00000000570)	Misp3 (ENSPEMG00000017574)	1700067K01Rik (ENSPEMG00000008680)	ENSPEMG00000017586	Prkaca (ENSPEMG00000002089)	Asf1b (ENSPEMG00000026306)	Adgrl1 (ENSPEMG00000008075)	ENSPEMG00000028964	Adgre5 (ENSPEMG00000012912)	ENSPEMG00000017767	Pkn1 (ENSPEMG00000018704)	Ptger1 (ENSPEMG00000027389)	Gipc1 (ENSPEMG00000008496)	Dnajb1 (ENSPEMG00000007843)	Tecr (ENSPEMG00000008519) #22	Ndufb7 (ENSPEMG00000010565) #23	Prmt9 (ENSPEMG00000029675)	Or10k2 (ENSPEMG00000027328)	Scoc (ENSPEMG00000024835)	Clgn (ENSPEMG00000023114)	Mgat4d (ENSPEMG00000022918)	Elmod2 (ENSPEMG00000028361)	Ucp1 (ENSPEMG00000022488)	ENSPEMG00000024217	Tbc1d9 (ENSPEMG00000024048)	ENSPEMG00000026256	ENSPEMG00000030162	Rnf150 (ENSPEMG00000008599)	Zfp330 (ENSPEMG00000022167)	Il15 (ENSPEMG00000029894)
Murinae	ANCESTRAL SPECIES	15	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403	ENSGT00940000156801
Rat	MODERN SPECIES	10	Il27ra (ENSRNOG00000005747)	Il27ra (ENSRNOG00000005729)	Misp3 (ENSRNOG00000005619)	LOC686013 (ENSRNOG00000005533)	Samd1 (ENSRNOG00000065861)	Prkaca (ENSRNOG00000005257)	Asf1b (ENSRNOG00000005115)	Adgrl1 (ENSRNOG00000029134)	AABR07043167.1 (ENSRNOG00000039252)	Adgre5 (ENSRNOG00000004489)	Ddx39a (ENSRNOG00000004373)	Pkn1 (ENSRNOG00000004131)	Gipc1 (ENSRNOG00000003864)	Ptger1 (ENSRNOG00000004094)	Dnajb1 (ENSRNOG00000021824)	Tecr (ENSRNOG00000021808) #22	Ndufb7 (ENSRNOG00000028717) #23	Or10k2 (ENSRNOG00000028439)	Scoc (ENSRNOG00000003853)	Clgn (ENSRNOG00000003755)	Elmod2 (ENSRNOG00000028176)	Ucp1 (ENSRNOG00000003580)	Tbc1d9 (ENSRNOG00000003496)	Rnf150 (ENSRNOG00000003479)	Zfp330 (ENSRNOG00000003461)	LOC688712 (ENSRNOG00000033819)	Il15 (ENSRNOG00000003439)	Inpp4b (ENSRNOG00000018382)	AABR07043598.1 (ENSRNOG00000028320)	Usp38 (ENSRNOG00000026880)	Gab1 (ENSRNOG00000017879)
Mus	ANCESTRAL SPECIES	6	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403
Shrew mouse	MODERN SPECIES	12	Il27ra (MGP_PahariEiJ_G0022893)	Palm3 (MGP_PahariEiJ_G0022892)	Misp3 (MGP_PahariEiJ_G0022891)	1700067K01Rik (MGP_PahariEiJ_G0022890)	MGP_PahariEiJ_G0022889	Prkaca (MGP_PahariEiJ_G0022888)	Asf1b (MGP_PahariEiJ_G0022887)	MGP_PahariEiJ_G0022886	Adgrl1 (MGP_PahariEiJ_G0022885)	Adgre5 (MGP_PahariEiJ_G0022884)	Ddx39a (MGP_PahariEiJ_G0022883)	Ptger1 (MGP_PahariEiJ_G0022882)	Pkn1 (MGP_PahariEiJ_G0022881)	Gipc1 (MGP_PahariEiJ_G0022880)	Dnajb1 (MGP_PahariEiJ_G0022879)	Tecr (MGP_PahariEiJ_G0022878) #22	Ndufb7 (MGP_PahariEiJ_G0022877) #23	Or10k2 (MGP_PahariEiJ_G0022876)	MGP_PahariEiJ_G0022875	Clgn (MGP_PahariEiJ_G0022874)	Mgat4d (MGP_PahariEiJ_G0022873)	Elmod2 (MGP_PahariEiJ_G0022872)	Ucp1 (MGP_PahariEiJ_G0022871)	Tbc1d9 (MGP_PahariEiJ_G0022870)	MGP_PahariEiJ_G0022869	Rnf150 (MGP_PahariEiJ_G0022868)	Zfp330 (MGP_PahariEiJ_G0022867)	Il15 (MGP_PahariEiJ_G0022866)	Inpp4b (MGP_PahariEiJ_G0022865)	Usp38 (MGP_PahariEiJ_G0022864)	Gab1 (MGP_PahariEiJ_G0022863)
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186.c	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403
Ryukyu mouse	MODERN SPECIES	17	Il27ra (MGP_CAROLIEiJ_G0031287)	Palm3 (MGP_CAROLIEiJ_G0031286)	Misp3 (MGP_CAROLIEiJ_G0031285)	1700067K01Rik (MGP_CAROLIEiJ_G0031284)	MGP_CAROLIEiJ_G0031283	Prkaca (MGP_CAROLIEiJ_G0031282)	Asf1b (MGP_CAROLIEiJ_G0031281)	MGP_CAROLIEiJ_G0031280	Adgrl1 (MGP_CAROLIEiJ_G0031279)	Adgre5 (MGP_CAROLIEiJ_G0031278)	Ddx39a (MGP_CAROLIEiJ_G0031277)	Pkn1 (MGP_CAROLIEiJ_G0031276)	Ptger1 (MGP_CAROLIEiJ_G0031275)	Gipc1 (MGP_CAROLIEiJ_G0031274)	Dnajb1 (MGP_CAROLIEiJ_G0031273)	Tecr (MGP_CAROLIEiJ_G0031272) #22	Ndufb7 (MGP_CAROLIEiJ_G0031271) #23	Or10k2 (MGP_CAROLIEiJ_G0031270)	MGP_CAROLIEiJ_G0031269	MGP_CAROLIEiJ_G0031268	Mgat4d (MGP_CAROLIEiJ_G0031267)	Elmod2 (MGP_CAROLIEiJ_G0031266)	Ucp1 (MGP_CAROLIEiJ_G0031265)	Tbc1d9 (MGP_CAROLIEiJ_G0031264)	MGP_CAROLIEiJ_G0031263	Rnf150 (MGP_CAROLIEiJ_G0031262)	Zfp330 (MGP_CAROLIEiJ_G0031261)	Il15 (MGP_CAROLIEiJ_G0031260)	Inpp4b (MGP_CAROLIEiJ_G0031259)	Usp38 (MGP_CAROLIEiJ_G0031258)	Gab1 (MGP_CAROLIEiJ_G0031257)
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186.c	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043.j	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403
Mouse	MODERN SPECIES	17	Il27ra (ENSMUSG00000005465)	Palm3 (ENSMUSG00000047986)	Misp3 (ENSMUSG00000074217)	1700067K01Rik (ENSMUSG00000046408)	Samd1 (ENSMUSG00000079003)	SMIM46 (ENSMUSG00000121579)	Prkaca (ENSMUSG00000005469)	Asf1b (ENSMUSG00000005470)	Adgrl1 (ENSMUSG00000013033)	Adgre5 (ENSMUSG00000002885)	Ddx39a (ENSMUSG00000005481)	Ptger1 (ENSMUSG00000019464)	Pkn1 (ENSMUSG00000057672)	Gipc1 (ENSMUSG00000019433)	Dnajb1 (ENSMUSG00000005483)	Tecr (ENSMUSG00000031708) #22	Ndufb7 (ENSMUSG00000033938) #23	Or10k2 (ENSMUSG00000047286)	Scoc (ENSMUSG00000063253)	Clgn (ENSMUSG00000002190)	Mgat4d (ENSMUSG00000035057)	Elmod2 (ENSMUSG00000035151)	Ucp1 (ENSMUSG00000031710)	Tbc1d9 (ENSMUSG00000031709)	Rnf150 (ENSMUSG00000047747)	Zfp330 (ENSMUSG00000031711)	Il15 (ENSMUSG00000031712)	Inpp4b (ENSMUSG00000037940)	Usp38 (ENSMUSG00000038250)	Gab1 (ENSMUSG00000031714)	Smarca5 (ENSMUSG00000031715)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186.c	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00860000135863	ENSGT00940000156171	ENSGT00390000017043.j	ENSGT00390000016264	ENSGT00940000157587	ENSGT00960000189829	ENSGT00940000158403
spretus	MODERN SPECIES	17	Rln3 (MGP_SPRETEiJ_G0032406)	Il27ra (MGP_SPRETEiJ_G0032405)	Palm3 (MGP_SPRETEiJ_G0032404)	Misp3 (MGP_SPRETEiJ_G0032403)	1700067K01Rik (MGP_SPRETEiJ_G0032402)	Prkaca (MGP_SPRETEiJ_G0032401)	Asf1b (MGP_SPRETEiJ_G0032400)	MGP_SPRETEiJ_G0032399	Adgrl1 (MGP_SPRETEiJ_G0032398)	Adgre5 (MGP_SPRETEiJ_G0032397)	Ddx39a (MGP_SPRETEiJ_G0032396)	Pkn1 (MGP_SPRETEiJ_G0032395)	Ptger1 (MGP_SPRETEiJ_G0032394)	Gipc1 (MGP_SPRETEiJ_G0032393)	Dnajb1 (MGP_SPRETEiJ_G0032392)	Tecr (MGP_SPRETEiJ_G0032391) #22	Ndufb7 (MGP_SPRETEiJ_G0032390) #23	Or10k2 (MGP_SPRETEiJ_G0032389)	Clgn (MGP_SPRETEiJ_G0032388)	Mgat4d (MGP_SPRETEiJ_G0032387)	Elmod2 (MGP_SPRETEiJ_G0032386)	Ucp1 (MGP_SPRETEiJ_G0032385)	Tbc1d9 (MGP_SPRETEiJ_G0032384)	MGP_SPRETEiJ_G0032383	Rnf150 (MGP_SPRETEiJ_G0032382)	MGP_SPRETEiJ_G0032381	Il15 (MGP_SPRETEiJ_G0032380)	Inpp4b (MGP_SPRETEiJ_G0032379)	Usp38 (MGP_SPRETEiJ_G0032378)	Gab1 (MGP_SPRETEiJ_G0032377)	Smarca5 (MGP_SPRETEiJ_G0032376)
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2936	Rln3 (ENSMSIG00000012772)	Il27ra (ENSMSIG00000012734)	Palm3 (ENSMSIG00000012709)	ENSMSIG00000012685	1700067K01Rik (ENSMSIG00000012658)	ENSMSIG00000012646	Prkaca (ENSMSIG00000012589)	Asf1b (ENSMSIG00000012561)	Adgrl1 (ENSMSIG00000012147)	Adgre5 (ENSMSIG00000011871)	Ddx39a (ENSMSIG00000011831)	Pkn1 (ENSMSIG00000011733)	Ptger1 (ENSMSIG00000011721)	Gipc1 (ENSMSIG00000011710)	Dnajb1 (ENSMSIG00000011684)	ENSMSIG00000011638 #22	Ndufb7 (ENSMSIG00000011624) #23	Or10k2 (ENSMSIG00000011619)	ENSMSIG00000011586	Clgn (ENSMSIG00000011551)	Mgat4d (ENSMSIG00000011538)	Elmod2 (ENSMSIG00000011531)	Ucp1 (ENSMSIG00000011518)	ENSMSIG00000011479	Tbc1d9 (ENSMSIG00000011256)	ENSMSIG00000011243	ENSMSIG00000010992
Steppe mouse	MODERN SPECIES	2949				ENSMSIG00000024781	ENSMSIG00000024707	Birc6 (ENSMSIG00000023387)	Yipf4 (ENSMSIG00000023337)	Nlrc4 (ENSMSIG00000023326)	Slc30a6 (ENSMSIG00000023266)	ENSMSIG00000022859	Dpy30 (ENSMSIG00000022833)	ENSMSIG00000022739	ENSMSIG00000022729	Srd5a2 (ENSMSIG00000022711) ##22	Xdh (ENSMSIG00000017693)	ENSMSIG00000017664 #22	Ehd3 (ENSMSIG00000017648)	Galnt14 (ENSMSIG00000017578)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000163161.h #26	ENSGT00940000162597	ENSGT00950000183216.d.j.a.a.b.a.a	ENSGT00950000183216.d.j.a.a.a.a.b	ENSGT00940000153523.a.a	ENSGT00950000183216.d.j.a.a.b.a.b	ENSGT00940000163952	ENSGT00950000183216.d.j.b	ENSGT00940000153523.a.b	ENSGT00950000183216.d.j.a.a.a.a.a.a.b	ENSGT00940000153523.b	ENSGT00940000162084	ENSGT00940000159972 #27
Hystricomorpha	ANCESTRAL SPECIES	55	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00940000163952	ENSGT00950000183216.d.j.b	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT01100000263561.C.c	ENSGT00940000160234	ENSGT00800000125293	ENSGT00940000162086
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	21	RLN3 (ENSHGLG00000006860)	IL27RA (ENSHGLG00000008513)	ENSHGLG00000038000	MISP3 (ENSHGLG00000004102)	C19orf67 (ENSHGLG00000004595)	ENSHGLG00000041868	ENSHGLG00000007137	ENSHGLG00000009203	ADGRL1 (ENSHGLG00000011314)	ENSHGLG00000042784	DDX39A (ENSHGLG00000018263)	PKN1 (ENSHGLG00000015605)	PTGER1 (ENSHGLG00000015428)	GIPC1 (ENSHGLG00000035217)	DNAJB1 (ENSHGLG00000016171)	ENSHGLG00000018607 #22	NDUFB7 (ENSHGLG00000044161) #23	ENSHGLG00000035999	ENSHGLG00000032390	ENSHGLG00000036859	ENSHGLG00000041413	ENSHGLG00000048956	ENSHGLG00000038574	ENSHGLG00000037347	ENSHGLG00000034158	ENSHGLG00000020237	ENSHGLG00000043939	ENSHGLG00000005565	ENSHGLG00000020442	SLC1A6 (ENSHGLG00000044141) #27	CCDC105 (ENSHGLG00000009025) #28
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000042096	DLG2 (ENSHGLG00000004449)	ENSHGLG00000037235	ENSHGLG00000003500	ENSHGLG00000003233	CREBZF (ENSHGLG00000003083)	CCDC89 (ENSHGLG00000037872)	ENSHGLG00000002340	CCDC83 (ENSHGLG00000036065)	PICALM (ENSHGLG00000001052)	ENSHGLG00000001667	EED (ENSHGLG00000001511)	ENSHGLG00000041908	CCDC81 (ENSHGLG00000001095)	ENSHGLG00000038302	ENSHGLG00000001103 #22	ME3 (ENSHGLG00000001044)	ENSHGLG00000000902	PRSS23 (ENSHGLG00000047569)	FZD4 (ENSHGLG00000000698)	ENSHGLG00000032437	ENSHGLG00000043753	TMEM135 (ENSHGLG00000001739)	ENSHGLG00000045425	ENSHGLG00000034306	RAB38 (ENSHGLG00000041890)	CTSC (ENSHGLG00000001420)	ENSHGLG00000042131	ENSHGLG00000046021	GRM5 (ENSHGLG00000001307)	TYR (ENSHGLG00000001054)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00940000163952	ENSGT00950000183216.d.j.b	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT01100000263561.C.c	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b
Guinea pig	MODERN SPECIES	168				MISP3 (ENSCPOG00000025660)	C19orf67 (ENSCPOG00000013984)	ENSCPOG00000020078	ASF1B (ENSCPOG00000023872)	ADGRL1 (ENSCPOG00000026254)	ENSCPOG00000036045	ADGRE5 (ENSCPOG00000006388)	DDX39A (ENSCPOG00000008615)	PKN1 (ENSCPOG00000019915)	PTGER1 (ENSCPOG00000032486)	GIPC1 (ENSCPOG00000022424)	DNAJB1 (ENSCPOG00000035272)	TECR (ENSCPOG00000014436) #22	NDUFB7 (ENSCPOG00000014437) #23	ENSCPOG00000039546	ENSCPOG00000033916	OR4S2 (ENSCPOG00000038628)	ENSCPOG00000019746	ENSCPOG00000037826	ENSCPOG00000022332	ENSCPOG00000031116	ENSCPOG00000030591	ENSCPOG00000031371	ENSCPOG00000038355	ENSCPOG00000015657	ENSCPOG00000030751	ENSCPOG00000007338	ENSCPOG00000032536
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00950000182755.b.a.a.a.a.a.b.d.b
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	114	IL27RA (ENSODEG00000009893)	PALM3 (ENSODEG00000008820)	MISP3 (ENSODEG00000009732)	C19orf67 (ENSODEG00000010090)	PRKACA (ENSODEG00000009087)	ASF1B (ENSODEG00000009467)	ENSODEG00000009258	ADGRL1 (ENSODEG00000008624)	ENSODEG00000019750	ADGRE5 (ENSODEG00000009226)	ENSODEG00000009068	PKN1 (ENSODEG00000008829)	PTGER1 (ENSODEG00000010144)	ENSODEG00000008921	DNAJB1 (ENSODEG00000008741)	ENSODEG00000008880 #22	NDUFB7 (ENSODEG00000008312) #23	ZNF791 (ENSODEG00000009519)	ENSODEG00000008483
Degu	MODERN SPECIES	124	ENSODEG00000015444	ENSODEG00000015943	WTIP (ENSODEG00000015801)	ENSODEG00000015301	PDCD2L (ENSODEG00000016213)	GPI (ENSODEG00000014778)	GARRE1 (ENSODEG00000014705)	LSM14A (ENSODEG00000014352)	ENSODEG00000020314	ENSODEG00000020231	KCTD15 (ENSODEG00000014330)	CHST8 (ENSODEG00000014339)	PEPD (ENSODEG00000014789)	SLC7A10 (ENSODEG00000014633)	LRP3 (ENSODEG00000015710)	ENSODEG00000020284 #22	COX6B1 (ENSODEG00000014806)	UPK1A (ENSODEG00000014934)	ENSODEG00000014837	KMT2B (ENSODEG00000014424)	PSENEN (ENSODEG00000015490)	LIN37 (ENSODEG00000015303)	HSPB6 (ENSODEG00000016136)	ENSODEG00000015182	ARHGAP33 (ENSODEG00000015228)	PRODH2 (ENSODEG00000014603)	NPHS1 (ENSODEG00000015475)	KIRREL2 (ENSODEG00000014834)	APLP1 (ENSODEG00000015942)	NFKBID (ENSODEG00000015317)	TYROBP (ENSODEG00000015961)
Degu	MODERN SPECIES	117	PUS1 (ENSODEG00000008248)	ULK1 (ENSODEG00000008683)	MMP17 (ENSODEG00000008852)	SFSWAP (ENSODEG00000008020)	ENSODEG00000008349	STX2 (ENSODEG00000009934)	RIMBP2 (ENSODEG00000009979)	PIWIL1 (ENSODEG00000010629)	ENSODEG00000019685	ENSODEG00000008825	SLC15A4 (ENSODEG00000009561)	ENSODEG00000009405	ENSODEG00000009816	ENSODEG00000009713	ENSODEG00000010443	ENSODEG00000019612 #22	AACS (ENSODEG00000008915)	DHX37 (ENSODEG00000009929)	ENSODEG00000019559	NCOR2 (ENSODEG00000009536)	CCDC92 (ENSODEG00000008834)	DNAH10 (ENSODEG00000009996)	ATP6V0A2 (ENSODEG00000009400)	ENSODEG00000010094	ENSODEG00000010222	ENSODEG00000009632	ENSODEG00000010829	RILPL1 (ENSODEG00000010907)	SNRNP35 (ENSODEG00000019870)	ENSODEG00000011545	SBNO1 (ENSODEG00000009997)
Long-tailed chinchilla	MODERN SPECIES	122	RLN3 (ENSCLAG00000013074)	IL27RA (ENSCLAG00000013752)	PALM3 (ENSCLAG00000016217)	C19orf67 (ENSCLAG00000014973)	PRKACA (ENSCLAG00000015604)	ASF1B (ENSCLAG00000011839)	ADGRL1 (ENSCLAG00000013543)	ENSCLAG00000013773	ADGRE5 (ENSCLAG00000014267)	DDX39A (ENSCLAG00000015069)	PKN1 (ENSCLAG00000016252)	PTGER1 (ENSCLAG00000015236)	GIPC1 (ENSCLAG00000016614)	DNAJB1 (ENSCLAG00000014789)	NDUFB7 (ENSCLAG00000015228) #23	TECR (ENSCLAG00000015751) #22
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000163161.h #26	ENSGT00940000162597	ENSGT00950000183216.d.j.a.a.b.a.a	ENSGT00950000183216.d.j.a.a.a.a.b.a	ENSGT00940000153523.a.a	ENSGT00950000183216.d.j.a.a.b.a.b	ENSGT00950000183216.d.j.b	ENSGT00940000153523.a.b	ENSGT00950000183216.d.j.a.a.a.a.a.a.b	ENSGT00940000153523.b	ENSGT00940000162084.a	ENSGT00940000159972 #27	ENSGT00390000003207 #28
Marmotini	ANCESTRAL SPECIES	41	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000162597.q.b	ENSGT00950000183216.d.j.a.a.a.a.a.b	ENSGT00950000183216.d.j.a.a.a.a.b.b	ENSGT00940000153523.a.a	ENSGT00940000162084.a.c	ENSGT00940000153523.b.d
Alpin marmot	MODERN SPECIES	24	PODNL1 (ENSMMMG00000021701)	DCAF15 (ENSMMMG00000021706)	RFX1 (ENSMMMG00000021740)	RLN3 (ENSMMMG00000021867)	IL27RA (ENSMMMG00000021869)	C19orf67 (ENSMMMG00000021884)	ENSMMMG00000021895	PRKACA (ENSMMMG00000021903)	ASF1B (ENSMMMG00000021930)	ADGRL1 (ENSMMMG00000021934)	ENSMMMG00000021974	ADGRE5 (ENSMMMG00000021978)	DDX39A (ENSMMMG00000021991)	PKN1 (ENSMMMG00000021999)	DNAJB1 (ENSMMMG00000022072)	TECR (ENSMMMG00000022077) #22	NDUFB7 (ENSMMMG00000022088) #23	ADGRE3 (ENSMMMG00000022100) #25	ENSMMMG00000022105	ENSMMMG00000022107 #26	ENSMMMG00000022108	ENSMMMG00000022127	ENSMMMG00000022158	ENSMMMG00000022159	ENSMMMG00000022163	ENSMMMG00000022174	ENSMMMG00000022180	ENSMMMG00000022182	ENSMMMG00000022184	ENSMMMG00000022185	ENSMMMG00000022188
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000162597.q.b
Squirrel	MODERN SPECIES	259	RFX1 (ENSSTOG00000025432)	RLN3 (ENSSTOG00000024302)	IL27RA (ENSSTOG00000008690)	PALM3 (ENSSTOG00000023133)	C19orf67 (ENSSTOG00000001321)	PRKACA (ENSSTOG00000002327)	ASF1B (ENSSTOG00000002335)	ADGRL1 (ENSSTOG00000024713)	ENSSTOG00000021516	ADGRE5 (ENSSTOG00000013742)	DDX39A (ENSSTOG00000013762)	PKN1 (ENSSTOG00000029002)	PTGER1 (ENSSTOG00000013787)	GIPC1 (ENSSTOG00000013788)	DNAJB1 (ENSSTOG00000026438)	TECR (ENSSTOG00000013803) #22	NDUFB7 (ENSSTOG00000013808) #23	ADGRE3 (ENSSTOG00000013792) #25	ENSSTOG00000026233	ENSSTOG00000023456	ENSSTOG00000027269	ENSSTOG00000030591	ENSSTOG00000031435	ENSSTOG00000031498	ENSSTOG00000025262	ENSSTOG00000007479	ENSSTOG00000033687	ENSSTOG00000034927	ENSSTOG00000032236	ENSSTOG00000034043	ENSSTOG00000032243
Arctic ground squirrel	MODERN SPECIES	217	RLN3 (ENSUPAG00010011794)	IL27RA (ENSUPAG00010011800)	PALM3 (ENSUPAG00010011814)	MISP3 (ENSUPAG00010011828)	C19orf67 (ENSUPAG00010011838)	ENSUPAG00010011851	PRKACA (ENSUPAG00010011860)	ASF1B (ENSUPAG00010011900)	ADGRL1 (ENSUPAG00010011915)	ADGRE5 (ENSUPAG00010012057)	DDX39A (ENSUPAG00010012095)	PKN1 (ENSUPAG00010012107)	PTGER1 (ENSUPAG00010012165)	GIPC1 (ENSUPAG00010012168)	DNAJB1 (ENSUPAG00010012186)	TECR (ENSUPAG00010012195) #22	NDUFB7 (ENSUPAG00010012248) #23	ENSUPAG00010012250
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	7	IL27RA (ENSSVLG00005025225)	PALM3 (ENSSVLG00005025246)	MISP3 (ENSSVLG00005025270)	C19orf67 (ENSSVLG00005025279)	ENSSVLG00005025298	PRKACA (ENSSVLG00005025328)	ASF1B (ENSSVLG00005025369)	ENSSVLG00005025395	ENSSVLG00005025403	ADGRE5 (ENSSVLG00005025449)	DDX39A (ENSSVLG00005025506)	PKN1 (ENSSVLG00005025535)	PTGER1 (ENSSVLG00005025557)	GIPC1 (ENSSVLG00005025566)	DNAJB1 (ENSSVLG00005025574)	ENSSVLG00005025594 #22	NDUFB7 (ENSSVLG00005025616) #23	ADGRE3 (ENSSVLG00005025645) #25	ZNF333 (ENSSVLG00005025683) #26	ADGRE2 (ENSSVLG00005025757)	ENSSVLG00005025810	ENSSVLG00005025813	ENSSVLG00005025815	ENSSVLG00005025816	ENSSVLG00005025818	ENSSVLG00005025822	ENSSVLG00005025825	ENSSVLG00005025828	ENSSVLG00005025832	ENSSVLG00005025835	ENSSVLG00005025837
Eurasian red squirrel	MODERN SPECIES	11	ZBTB25 (ENSSVLG00005000623)	ZBTB1 (ENSSVLG00005000601)	HSPA2 (ENSSVLG00005000590)	PPP1R36 (ENSSVLG00005000570)	PLEKHG3 (ENSSVLG00005000506)	SPTB (ENSSVLG00005000402)	CHURC1 (ENSSVLG00005000339)	GPX2 (ENSSVLG00005000324)	RAB15 (ENSSVLG00005000106)	FNTB (ENSSVLG00005016171)	MAX (ENSSVLG00005015939)	FUT8 (ENSSVLG00005015777)	ENSSVLG00005015705	CCDC196 (ENSSVLG00005015599)	ENSSVLG00005015565	ENSSVLG00005015525 #22	GPHN (ENSSVLG00005015415)	GARIN2 (ENSSVLG00005015341)	ENSSVLG00005015303	PALS1 (ENSSVLG00005015104)	ATP6V1D (ENSSVLG00005014932)	ENSSVLG00005014828	ENSSVLG00005014808	PLEK2 (ENSSVLG00005014694)	TMEM229B (ENSSVLG00005014672)	PLEKHH1 (ENSSVLG00005014392)	ENSSVLG00005014332	ENSSVLG00005014296	ENSSVLG00005014254	ARG2 (ENSSVLG00005014143)	VTI1B (ENSSVLG00005014100)
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000168162	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b	ENSGT00940000153523	ENSGT00950000183216.d.a.a.a.b	ENSGT00940000162084	ENSGT00950000183216.d.a.a.a.a	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000164113	ENSGT00950000183216.d.a.a.b.a.a	ENSGT00940000153523.m.a.a.a.a.a.b	ENSGT00940000162084	ENSGT00940000153523.m.a.b	ENSGT00950000183216.d.a.b.b.b	ENSGT00940000153523.m.a.a.b	ENSGT00950000183216.d.a.a.a.b	ENSGT00940000153523.m.a.a.a.a.b	ENSGT00950000183216.d.a.a.a.a
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000164113	ENSGT00940000153523.m.a.b	ENSGT00950000183216.d.a.b.b.b	ENSGT00940000153523.m.a.a.b	ENSGT00950000183216.d.a.a.a.b	ENSGT00940000153523.m.b	ENSGT00950000183216.d.a.a.a.a	ENSGT00940000153523.m.a.a.a.a.b	ENSGT00940000162084	ENSGT00940000153523.m.a.a.a.a.a.b
Carnivora	ANCESTRAL SPECIES	6	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000153523.m.a.a.a.b	ENSGT00950000183216.d.a.a.a.a	ENSGT00940000153523.m.b	ENSGT00940000164424	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT01100000263561.C.c
Caniformia	ANCESTRAL SPECIES	4	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164217.d.b	ENSGT00940000153523.m.b.c.a.a.a	ENSGT00940000164424	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT01100000263561.C.c	ENSGT00940000160234
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952.b	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000161134.C	ENSGT00940000161134.B
Mustelinae	ANCESTRAL SPECIES	45	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952.b	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113
American mink	MODERN SPECIES	233	RLN3 (ENSNVIG00000006699)	IL27RA (ENSNVIG00000006724)	PALM3 (ENSNVIG00000006881)	MISP3 (ENSNVIG00000006906)	PRKACA (ENSNVIG00000006918)	C19orf67 (ENSNVIG00000006983)	SAMD1 (ENSNVIG00000006996)	ASF1B (ENSNVIG00000007013)	ADGRL1 (ENSNVIG00000007029)	ADGRE5 (ENSNVIG00000007145)	DDX39A (ENSNVIG00000007480)	PKN1 (ENSNVIG00000007512)	PTGER1 (ENSNVIG00000007621)	GIPC1 (ENSNVIG00000007643)	DNAJB1 (ENSNVIG00000007668)	TECR (ENSNVIG00000007685) #22	NDUB7 (ENSNVIG00000007741) #23	ENSNVIG00000007763 #24	ADGRE3 (ENSNVIG00000007769) #25	ZNF333 (ENSNVIG00000007789) #26
Ferret	MODERN SPECIES	185	PALM3 (ENSMPUG00000003113)	MISP3 (ENSMPUG00000003110)	C19orf67 (ENSMPUG00000003089)	ENSMPUG00000003082	PRKACA (ENSMPUG00000003076)	ASF1B (ENSMPUG00000003072)	ADGRL1 (ENSMPUG00000003065)	ADGRE5 (ENSMPUG00000003059)	DDX39A (ENSMPUG00000003051)	PKN1 (ENSMPUG00000003038)	PTGER1 (ENSMPUG00000003008)	GIPC1 (ENSMPUG00000002983)	DNAJB1 (ENSMPUG00000002977)	ENSMPUG00000018704	NDUFB7 (ENSMPUG00000002959) #23	TECR (ENSMPUG00000002949) #22	ENSMPUG00000002943 #24	ADGRE3 (ENSMPUG00000002932) #25	ZNF333 (ENSMPUG00000002929) #26	ENSMPUG00000002919	ENSMPUG00000002913	ENSMPUG00000018702	ENSMPUG00000018701	ENSMPUG00000002909
Ursidae	ANCESTRAL SPECIES	20	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000161134.C	ENSGT00940000161134.B
Ursus	ANCESTRAL SPECIES	91	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952.b	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990.g	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597	ENSGT00940000161134.C.a.a	ENSGT00940000161134.B
American black bear	MODERN SPECIES	2685													ENSUAMG00000017518	GIPC1 (ENSUAMG00000017519)	DNAJB1 (ENSUAMG00000017520)	TECR (ENSUAMG00000017521) #22	NDUFB7 (ENSUAMG00000017522) #23	ENSUAMG00000017523 #24	ADGRE3 (ENSUAMG00000017524) #25	ENSUAMG00000017526 #26
Polar bear	MODERN SPECIES	464	RFX1 (ENSUMAG00000004593)	RLN3 (ENSUMAG00000004584)	IL27RA (ENSUMAG00000004578)	PALM3 (ENSUMAG00000004555)	C19orf67 (ENSUMAG00000004533)	ENSUMAG00000004525	PRKACA (ENSUMAG00000004434)	ASF1B (ENSUMAG00000004416)	ENSUMAG00000004412	ADGRL1 (ENSUMAG00000004364)	ADGRE5 (ENSUMAG00000004331)	DDX39A (ENSUMAG00000004317)	PKN1 (ENSUMAG00000003471)	ENSUMAG00000003324	DNAJB1 (ENSUMAG00000003319)	TECR (ENSUMAG00000003206) #22	CLEC17A (ENSUMAG00000003197) #24	ADGRE3 (ENSUMAG00000003184) #25	ENSUMAG00000003166 #26	ENSUMAG00000003077	ENSUMAG00000003010	ENSUMAG00000002987	ENSUMAG00000002984	ENSUMAG00000002981	ENSUMAG00000002971	ENSUMAG00000002966	ENSUMAG00000002953
Giant Panda	MODERN SPECIES	14	RFX1 (ENSAMEG00000013075)	RLN3 (ENSAMEG00000027838)	IL27RA (ENSAMEG00000013118)	PALM3 (ENSAMEG00000030397)	MISP3 (ENSAMEG00000027357)	C19orf67 (ENSAMEG00000013133)	ENSAMEG00000013143	PRKACA (ENSAMEG00000013145)	ASF1B (ENSAMEG00000026497)	ADGRL1 (ENSAMEG00000013217)	ENSAMEG00000028371	ADGRE5 (ENSAMEG00000013296)	DDX39A (ENSAMEG00000013379)	PKN1 (ENSAMEG00000013411)	DNAJB1 (ENSAMEG00000013494)	TECR (ENSAMEG00000011444) #22	ENSAMEG00000027886 #23	CLEC17A (ENSAMEG00000011477) #24	ADGRE3 (ENSAMEG00000011480) #25	ENSAMEG00000031475 #26	ENSAMEG00000013445	ENSAMEG00000013447	ENSAMEG00000027168	ENSAMEG00000027445	ENSAMEG00000026098	ENSAMEG00000023803	ENSAMEG00000023946	ENSAMEG00000010476	ENSAMEG00000025245	ENSAMEG00000024078	ENSAMEG00000028843
Canidae	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a.d	ENSGT00940000159684	ENSGT00520000059915	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.f	ENSGT00940000162597	ENSGT00940000164113.e	ENSGT00940000161134.C	ENSGT00940000153523.m.a.a.a.a.a.a.b	ENSGT00950000183216.d.a.a.a.a.e.b	ENSGT00940000153523.m.a.a.a.b.a.a.a	ENSGT00940000164217.d.a.a.b	ENSGT00940000153523.m.a.a.a.a.a.a.a	ENSGT00940000164217.c	ENSGT00940000163881.e
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a.d	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.f.a	ENSGT00940000162597	ENSGT00940000164113.e	ENSGT00940000161134.C	ENSGT00940000153523.m.a.a.a.a.a.a.b	ENSGT00950000183216.d.a.a.a.a.e.b	ENSGT00940000153523.m.a.a.a.b.a.a.a	ENSGT00940000164217.d.a.a.b	ENSGT00940000153523.m.a.a.a.a.a.a.a	ENSGT00940000164217.c	ENSGT00940000163881.e
Dingo	MODERN SPECIES	112	PALM3 (ENSCAFG00020006907)	MISP3 (ENSCAFG00020006913)	C19orf67 (ENSCAFG00020006921)	ENSCAFG00020006932	PRKACA (ENSCAFG00020006939)	ENSCAFG00020006946	ADGRL1 (ENSCAFG00020006957)	ENSCAFG00020007285	ENSCAFG00020007287	ADGRE5 (ENSCAFG00020007373)	DDX39A (ENSCAFG00020007399)	PKN1 (ENSCAFG00020007410)	PTGER1 (ENSCAFG00020007434)	GIPC1 (ENSCAFG00020007439)	DNAJB1 (ENSCAFG00020007442)	TECR (ENSCAFG00020007445) #22	NDUFB7 (ENSCAFG00020007450) #23	ENSCAFG00020007456 #24	ADGRE3 (ENSCAFG00020007464) #25	ENSCAFG00020007537 #26	ENSCAFG00020007546	ENSCAFG00020007563	ENSCAFG00020007596	ENSCAFG00020007640	ENSCAFG00020007651	ENSCAFG00020007699	ENSCAFG00020007715	ENSCAFG00020007740	ENSCAFG00020007741	ENSCAFG00020007746	ENSCAFG00020007756
Dog	MODERN SPECIES	12	RLN3 (ENSCAFG00845025377)	IL27RA (ENSCAFG00845025289)	PALM3 (ENSCAFG00845025220)	MISP3 (ENSCAFG00845025166)	C19orf67 (ENSCAFG00845025095)	ENSCAFG00845025014	PRKACA (ENSCAFG00845024723)	ASF1B (ENSCAFG00845024582)	ENSCAFG00845024540	ADGRL1 (ENSCAFG00845023599)	ADGRE5 (ENSCAFG00845022971)	DDX39A (ENSCAFG00845022719)	PKN1 (ENSCAFG00845022295)	GIPC1 (ENSCAFG00845022090)	DNAJB1 (ENSCAFG00845022007)	TECR (ENSCAFG00845021824) #22	NDUFB7 (ENSCAFG00845021755) #23	CLEC17A (ENSCAFG00845021648) #24	ADGRE3 (ENSCAFG00845021455) #25	ZNF333 (ENSCAFG00845021377) #26	ADGRE2 (ENSCAFG00845020704)	ENSCAFG00845020230	OR7A73 (ENSCAFG00845020159)	ENSCAFG00845020137	ENSCAFG00845020110	ENSCAFG00845020091	ENSCAFG00845020055	OR7A60 (ENSCAFG00845020037)	OR7A55 (ENSCAFG00845020018)	ENSCAFG00845020002	OR7A58 (ENSCAFG00845019983)
Red fox	MODERN SPECIES	182	RFX1 (ENSVVUG00000026765)	RLN3 (ENSVVUG00000026766)	IL27RA (ENSVVUG00000026768)	PALM3 (ENSVVUG00000026777)	CUNH19orf67 (ENSVVUG00000026783)	ENSVVUG00000026786	PRKACA (ENSVVUG00000026789)	ENSVVUG00000026791	ADGRL1 (ENSVVUG00000026800)	ENSVVUG00000026816	ADGRE5 (ENSVVUG00000026826)	DDX39A (ENSVVUG00000026939)	PKN1 (ENSVVUG00000026944)	GIPC1 (ENSVVUG00000026950)	DNAJB1 (ENSVVUG00000026955)	TECR (ENSVVUG00000026956) #22	NDUFB7 (ENSVVUG00000026960) #23	ADGRE3 (ENSVVUG00000026964) #25	ENSVVUG00000026970	ENSVVUG00000026972 #26	ENSVVUG00000026973	ENSVVUG00000026974	ENSVVUG00000026977	ENSVVUG00000026982	ENSVVUG00000026983	ENSVVUG00000026985	ENSVVUG00000026987	ENSVVUG00000026989	ENSVVUG00000026991	ENSVVUG00000026992	ENSVVUG00000026994
Felidae	ANCESTRAL SPECIES	21	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.j.b	ENSGT00940000164113.j.a	ENSGT00940000161134.C.c.a.a	ENSGT00940000161134.B	ENSGT00940000153523.m.a.a.a.a.a.b.a.a.a.a	ENSGT00940000153523.m.b.b	ENSGT00940000153523.m.a.a.a.a.a.b.a.a.a.b
Cat	MODERN SPECIES	1	PALM3 (ENSFCAG00000041444)	IL27RA (ENSFCAG00000003723)	MISP3 (ENSFCAG00000040950)	CA2H19orf67 (ENSFCAG00000009466)	ENSFCAG00000026810	PRKACA (ENSFCAG00000025137)	ASF1B (ENSFCAG00000023314)	ADGRL1 (ENSFCAG00000003727)	ENSFCAG00000035484	ADGRE5 (ENSFCAG00000013486)	DDX39A (ENSFCAG00000013488)	PKN1 (ENSFCAG00000013492)	PTGER1 (ENSFCAG00000044590)	GIPC1 (ENSFCAG00000013495)	DNAJB1 (ENSFCAG00000033551)	TECR (ENSFCAG00000032565) #22	NDUFB7 (ENSFCAG00000013496) #23	CLEC17A (ENSFCAG00000013497) #24	ADGRE3 (ENSFCAG00000015628) #25	ZNF333 (ENSFCAG00000032193) #26	ENSFCAG00000028637	ENSFCAG00000005648	ENSFCAG00000045149	ENSFCAG00000043754	ENSFCAG00000050682	ENSFCAG00000041503	ENSFCAG00000036671	ENSFCAG00000051711	ENSFCAG00000043404	ENSFCAG00000043671	ENSFCAG00000044633
Panthera	ANCESTRAL SPECIES	15	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.j.b	ENSGT00940000164113.j.a	ENSGT00390000009265.a.b	ENSGT00940000164113.i	ENSGT00940000161134.C.c.a.a	ENSGT00940000161134.B	ENSGT00940000153523.m.a.a.a.a.a.b.a.a.a.a
Panthera_a	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.j.b	ENSGT00940000164113.j.a	ENSGT00390000009265.a.b	ENSGT00940000163881.h	ENSGT00950000183216.d.a.b.b.a.a	ENSGT00950000183216.d.a.a.a.a.c	ENSGT00940000162084	ENSGT00950000183216.d.a.a.a.b	ENSGT00940000153523.m.a.a.b	ENSGT00950000183216.d.a.b.b.b.e	ENSGT00940000153523.m.a.b.c.a
lion	DUPLICATION
lion	MODERN SPECIES	4	CENPE (ENSPLOG00000009681)	TACR3 (ENSPLOG00000009533)	CXXC4 (ENSPLOG00000009493)	TET2 (ENSPLOG00000009422)	PPA2 (ENSPLOG00000009179)	ENSPLOG00000009093	ENSPLOG00000009051	ENSPLOG00000008987	INTS12 (ENSPLOG00000008950)	GSTCD (ENSPLOG00000008867)	NPNT (ENSPLOG00000008713)	TBCK (ENSPLOG00000008554)	AIMP1 (ENSPLOG00000008460)	GIMD1 (ENSPLOG00000008434)	DKK2 (ENSPLOG00000008392)	ENSPLOG00000008380 #22	PAPSS1 (ENSPLOG00000008350)	SGMS2 (ENSPLOG00000008317)	CYP2U1 (ENSPLOG00000008280)	HADH (ENSPLOG00000008215)	LEF1 (ENSPLOG00000007905)	ENSPLOG00000007832	OSTC (ENSPLOG00000007801)	ETNPPL (ENSPLOG00000007649)	COL25A1 (ENSPLOG00000005916)	SEC24B (ENSPLOG00000005625)	MCUB (ENSPLOG00000005572)	CASP6 (ENSPLOG00000005535)	PLA2G12A (ENSPLOG00000005482)	CFI (ENSPLOG00000005431)	GAR1 (ENSPLOG00000005331)
lion	MODERN SPECIES	2	RLN3 (ENSPLOG00000022484)	IL27RA (ENSPLOG00000022499)	PALM3 (ENSPLOG00000022520)	MISP3 (ENSPLOG00000022524)	C19orf67 (ENSPLOG00000022526)	ENSPLOG00000022530	PRKACA (ENSPLOG00000022536)	ASF1B (ENSPLOG00000022545)	ADGRL1 (ENSPLOG00000022557)	ADGRE5 (ENSPLOG00000022577)	DDX39A (ENSPLOG00000022592)	PKN1 (ENSPLOG00000022596)	PTGER1 (ENSPLOG00000022603)	GIPC1 (ENSPLOG00000022605)	DNAJB1 (ENSPLOG00000022608)	ENSPLOG00000022614 #22	NDUFB7 (ENSPLOG00000022618) #23	CLEC17A (ENSPLOG00000022623) #24	ADGRE3 (ENSPLOG00000022632) #25	ZNF333 (ENSPLOG00000022645) #26	ENSPLOG00000000036	ENSPLOG00000000064	ENSPLOG00000000082	OR7C1 (ENSPLOG00000000087)	ENSPLOG00000000090	ENSPLOG00000000099	ENSPLOG00000000103	ENSPLOG00000000117	SLC1A6 (ENSPLOG00000000144) #27	CCDC105 (ENSPLOG00000000174) #28	CASP14 (ENSPLOG00000000190) #29
leopard	DUPLICATION
leopard	MODERN SPECIES	3	CENPE (ENSPPRG00000012778)	TACR3 (ENSPPRG00000003966)	ENSPPRG00000003687	CXXC4 (ENSPPRG00000002765)	TET2 (ENSPPRG00000002345)	PPA2 (ENSPPRG00000000625)	ENSPPRG00000016640	ENSPPRG00000015602	INTS12 (ENSPPRG00000014557)	GSTCD (ENSPPRG00000012754)	NPNT (ENSPPRG00000010205)	TBCK (ENSPPRG00000006296)	ENSPPRG00000003078	GIMD1 (ENSPPRG00000002041)	DKK2 (ENSPPRG00000001046)	ENSPPRG00000000898 #22	PAPSS1 (ENSPPRG00000022612)	ENSPPRG00000022924	SGMS2 (ENSPPRG00000023391)	CYP2U1 (ENSPPRG00000022125)	HADH (ENSPPRG00000020822)	LEF1 (ENSPPRG00000015396)	ENSPPRG00000013513	ENSPPRG00000012933	ETNPPL (ENSPPRG00000012486)	COL25A1 (ENSPPRG00000010801)	SEC24B (ENSPPRG00000004492)	MCUB (ENSPPRG00000002855)	CASP6 (ENSPPRG00000002287)	PLA2G12A (ENSPPRG00000001811)	CFI (ENSPPRG00000001399)
leopard	MODERN SPECIES	110	RLN3 (ENSPPRG00000012695)	IL27RA (ENSPPRG00000013931)	MISP3 (ENSPPRG00000018582)	C19orf67 (ENSPPRG00000020108)	SAMD1 (ENSPPRG00000021562)	PRKACA (ENSPPRG00000023771)	ASF1B (ENSPPRG00000023372)	ENSPPRG00000023219	ADGRL1 (ENSPPRG00000000803)	ADGRE5 (ENSPPRG00000002663)	DDX39A (ENSPPRG00000003506)	PKN1 (ENSPPRG00000005767)	PTGER1 (ENSPPRG00000006114)	GIPC1 (ENSPPRG00000006660)	DNAJB1 (ENSPPRG00000008135)	ENSPPRG00000008632 #22	NDUFB7 (ENSPPRG00000009394) #23	CLEC17A (ENSPPRG00000009530) #24	ADGRE3 (ENSPPRG00000011690) #25	ZNF333 (ENSPPRG00000012398) #26	ENSPPRG00000015255	ENSPPRG00000023332	ENSPPRG00000023230	ENSPPRG00000000773
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b	ENSGT00950000182755.b.a.a.a.a.a.a.b.i	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935
Chiroptera	ANCESTRAL SPECIES	60	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597
Megabat	MODERN SPECIES	293										ADGRE5 (ENSPVAG00000006949)	DDX39A (ENSPVAG00000006950)	PKN1 (ENSPVAG00000006951)	PTGER1 (ENSPVAG00000006954)	GIPC1 (ENSPVAG00000006955)	DNAJB1 (ENSPVAG00000006956)	TECR (ENSPVAG00000006957) #22	NDUFB7 (ENSPVAG00000006960) #23	ENSPVAG00000006961 #24	ADGRE3 (ENSPVAG00000006963) #25	ZNF333 (ENSPVAG00000006967) #26
Microchiroptera	ANCESTRAL SPECIES	51	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161.b #26	ENSGT00940000162597	ENSGT00940000163161.a #26	ENSGT00940000164113
Microbat	MODERN SPECIES	1247	RFX1 (ENSMLUG00000013002)	RLN3 (ENSMLUG00000013013)	IL27RA (ENSMLUG00000013014)	PALM3 (ENSMLUG00000013023)	MISP3 (ENSMLUG00000017771)	C19orf67 (ENSMLUG00000024756)	PRKACA (ENSMLUG00000008255)	ASF1B (ENSMLUG00000000537)	ADGRL1 (ENSMLUG00000000503)	ADGRE5 (ENSMLUG00000009235)	ENSMLUG00000009280	PKN1 (ENSMLUG00000008347)	PTGER1 (ENSMLUG00000008382)	GIPC1 (ENSMLUG00000008387)	DNAJB1 (ENSMLUG00000012065)	TECR (ENSMLUG00000008415) #22	ENSMLUG00000008446 #23	CLEC17A (ENSMLUG00000008456) #24	ADGRE3 (ENSMLUG00000010862) #25	ENSMLUG00000022362	ENSMLUG00000010883 #26	ENSMLUG00000025927	ENSMLUG00000028398	ENSMLUG00000028004	ENSMLUG00000022908	ENSMLUG00000024262	ENSMLUG00000024081
Greater horseshoe bat	MODERN SPECIES	9	RLN3 (ENSRFEG00010010382)	IL27RA (ENSRFEG00010010284)	PALM3 (ENSRFEG00010010244)	MISP3 (ENSRFEG00010010210)	C19orf67 (ENSRFEG00010010158)	ENSRFEG00010009981	PRKACA (ENSRFEG00010009863)	ASF1B (ENSRFEG00010009782)	ADGRL1 (ENSRFEG00010009604)	ADGRE5 (ENSRFEG00010009510)	DDX39A (ENSRFEG00010009438)	PKN1 (ENSRFEG00010009333)	PTGER1 (ENSRFEG00010009300)	GIPC1 (ENSRFEG00010009204)	DNAJB1 (ENSRFEG00010009149)	TECR (ENSRFEG00010009075) #22	NDUFB7 (ENSRFEG00010009032) #23	CLEC17A (ENSRFEG00010009003) #24	ADGRE3 (ENSRFEG00010008585) #25	ENSRFEG00010008480 #26	ENSRFEG00010008341	ENSRFEG00010007884	ENSRFEG00010007357	ENSRFEG00010007312	TLL1 (ENSRFEG00010007269)	ENSRFEG00010007195	ENSRFEG00010007174	ENSRFEG00010015901	ENSRFEG00010015880 #26	CPE (ENSRFEG00010015819)	MSMO1 (ENSRFEG00010015756)
Equus	ANCESTRAL SPECIES	55	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00960000191218	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000164113.n	ENSGT00940000162597.h.b.b
Horse	MODERN SPECIES	28	IL27RA (ENSECAG00000011964)	MISP3 (ENSECAG00000035018)	PALM3 (ENSECAG00000030644)	C7H19orf67 (ENSECAG00000008641)	ENSECAG00000026959	PRKACA (ENSECAG00000016874)	ASF1B (ENSECAG00000015967)	ADGRL1 (ENSECAG00000021555)	ENSECAG00000054299	ENSECAG00000029649	ADGRE5 (ENSECAG00000010815)	DDX39A (ENSECAG00000040285)	PKN1 (ENSECAG00000038257)	PTGER1 (ENSECAG00000028942)	DNAJB1 (ENSECAG00000020066)	TECR (ENSECAG00000018572) #22	NDUFB7 (ENSECAG00000017656) #23	CLEC17A (ENSECAG00000017575) #24	ZNF333 (ENSECAG00000030567) #26	ADGRE3 (ENSECAG00000011315) #25	ENSECAG00000041925	ENSECAG00000030017	ENSECAG00000010232	ENSECAG00000024753	ENSECAG00000021028	ENSECAG00000051052	ENSECAG00000059022	ENSECAG00000044461	B3GAT1 (ENSECAG00000008023)	GLB1L2 (ENSECAG00000024922)	ENSECAG00000019629
Donkey	MODERN SPECIES	12	PALM3 (ENSEASG00005015298)	MISP3 (ENSEASG00005015296)	C19orf67 (ENSEASG00005015293)	ENSEASG00005015288	PRKACA (ENSEASG00005015286)	ASF1B (ENSEASG00005015285)	ENSEASG00005015284	ADGRL1 (ENSEASG00005015282)	ENSEASG00005015277	ADGRE5 (ENSEASG00005023556)	DDX39A (ENSEASG00005015272)	PKN1 (ENSEASG00005015248)	PTGER1 (ENSEASG00005035659)	GIPC1 (ENSEASG00005015241)	DNAJB1 (ENSEASG00005015239)	TECR (ENSEASG00005015236) #22	ENSEASG00005015233 #23	CLEC17A (ENSEASG00005032054) #24	ADGRE3 (ENSEASG00005015230) #25	ZNF333 (ENSEASG00005024676) #26	ENSEASG00005029275	ENSEASG00005037011	ENSEASG00005033242	ENSEASG00005012859	ENSEASG00005000255	ENSEASG00005028200	ENSEASG00005036476	ENSEASG00005024278	ENSEASG00005029787	ENSEASG00005036886	ENSEASG00005026960
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.a	ENSGT00950000183216.d.a.b.b.a	ENSGT00950000183216.d.a.a.b.a.a.b.b	ENSGT00950000183216.d.a.a.b.a.a.a.b.b	ENSGT00950000183216.d.a.a.b.a.a.a.a	ENSGT00940000162084	ENSGT00940000164217.a.a.a	ENSGT00950000183216.d.a.a.b.a.a.b.a
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.a	ENSGT00940000164424	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00940000160234
Camelidae	ANCESTRAL SPECIES	69	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a	ENSGT00950000183216.d.a.a.b.a.a.b.a	ENSGT00940000153523.m.a.a.a.a.a.b	ENSGT00950000183216.d.a.a.a.a	ENSGT00940000163881.b	ENSGT00940000164217.a.a.b	ENSGT00940000162084	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a
Arabian camel	MODERN SPECIES	14	RLN3 (ENSCDRG00005016381)	IL27RA (ENSCDRG00005016180)	PALM3 (ENSCDRG00005016115)	MISP3 (ENSCDRG00005016060)	C19orf67 (ENSCDRG00005016012)	PRKACA (ENSCDRG00005015856)	ASF1B (ENSCDRG00005015788)	ADGRL1 (ENSCDRG00005015480)	ADGRE5 (ENSCDRG00005015305)	DDX39A (ENSCDRG00005015189)	ENSCDRG00005014465	ENSCDRG00005014338	PTGER1 (ENSCDRG00005014294)	GIPC1 (ENSCDRG00005014240)	DNAJB1 (ENSCDRG00005014177)	TECR (ENSCDRG00005014045) #22	NDUFB7 (ENSCDRG00005014000) #23	CLEC17A (ENSCDRG00005013947) #24	ADGRE3 (ENSCDRG00005013272) #25	ZNF333 (ENSCDRG00005013062) #26	ENSCDRG00005012800	ENSCDRG00005012580	ENSCDRG00005012537	ENSCDRG00005012500	ENSCDRG00005012467	ENSCDRG00005012451	ENSCDRG00005012398	ENSCDRG00005012351	OR7C2 (ENSCDRG00005012289)	SLC1A6 (ENSCDRG00005012104) #27	CCDC105 (ENSCDRG00005012032) #28
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT01010000228731	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.a	ENSGT00940000164424	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b
Pecora	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT01010000228731	ENSGT00940000163161 #26	ENSGT00940000162597.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.b	ENSGT00950000183216.d.a.b.b.a.c.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00940000164217.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.a	ENSGT00940000164424	ENSGT00940000162084.ab.a
Yarkand deer	MODERN SPECIES	32	PALM3 (ENSCHYG00000007837)	IL27RA (ENSCHYG00000007720)	MISP3 (ENSCHYG00000007695)	C19orf67 (ENSCHYG00000007667)	ENSCHYG00000007646	PRKACA (ENSCHYG00000007558)	ASF1B (ENSCHYG00000007484)	ADGRL1 (ENSCHYG00000007185)	ADGRE5 (ENSCHYG00000006893)	DDX39A (ENSCHYG00000006844)	PKN1 (ENSCHYG00000006584)	PTGER1 (ENSCHYG00000006535)	GIPC1 (ENSCHYG00000006503)	ENSCHYG00000006485	DNAJB1 (ENSCHYG00000006441)	TECR (ENSCHYG00000006278) #22	NDUFB7 (ENSCHYG00000006236) #23	CLEC17A (ENSCHYG00000006193) #24	ADGRE3 (ENSCHYG00000006098) #25	ENSCHYG00000006076	ENSCHYG00000006052	ENSCHYG00000006025	ENSCHYG00000005985	ENSCHYG00000005948	ENSCHYG00000005933	ENSCHYG00000005908	ENSCHYG00000005864	ENSCHYG00000005854	ENSCHYG00000005832	ENSCHYG00000005792	ENSCHYG00000005771
Percora_a	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.b	ENSGT00950000183216.d.a.b.b.a.c.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00950000183216.d.a.a.b.a.a.a.b.a.a.a.b	ENSGT00950000183216.d.a.a.b.a.a.a.a	ENSGT00940000162084.ab.b	ENSGT00950000183216.d.a.a.b.a.a.a.b.a.a.b	ENSGT00940000161134.B
Siberian musk deer	MODERN SPECIES	34	IL27RA (ENSMMSG00000007566)	PALM3 (ENSMMSG00000007601)	MISP3 (ENSMMSG00000007622)	C19orf67 (ENSMMSG00000007644)	ENSMMSG00000007697	PRKACA (ENSMMSG00000007781)	ASF1B (ENSMMSG00000007873)	ADGRL1 (ENSMMSG00000007939)	ADGRE5 (ENSMMSG00000008090)	DDX39A (ENSMMSG00000008311)	PKN1 (ENSMMSG00000008406)	PTGER1 (ENSMMSG00000008566)	GIPC1 (ENSMMSG00000008589)	DNAJB1 (ENSMMSG00000008644)	ENSMMSG00000008667	TECR (ENSMMSG00000008684) #22	NDUFB7 (ENSMMSG00000008780) #23	ADGRE3 (ENSMMSG00000008808) #25	ZNF333 (ENSMMSG00000008909) #26	ADGRE2 (ENSMMSG00000008976)	ENSMMSG00000009533	ENSMMSG00000009540	ENSMMSG00000009549	ENSMMSG00000009561	ENSMMSG00000009589	ENSMMSG00000009609	ENSMMSG00000009632	ENSMMSG00000009647	ENSMMSG00000009660	ENSMMSG00000009674
Bovidae	ANCESTRAL SPECIES		ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.b.a.b	ENSGT00950000183216.d.a.b.b.a.c.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.b	ENSGT00940000163967.a	ENSGT00950000183216.d.a.a.b.a.a.a.a	ENSGT00940000162084.ab.b	ENSGT00940000164217.a.a.a
Caprinae	ANCESTRAL SPECIES	3	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a.e	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a
Goat	MODERN SPECIES	26	RLN3 (ENSCHIG00000003595)	IL27RA (ENSCHIG00000014900)	PALM3 (ENSCHIG00000021116)	MISP3 (ENSCHIG00000009281)	ENSCHIG00000015338	PRKACA (ENSCHIG00000016501)	ENSCHIG00000016998	ADGRL1 (ENSCHIG00000025611)	ADGRE5 (ENSCHIG00000010425)	DDX39A (ENSCHIG00000019059)	PTGER1 (ENSCHIG00000024064)	PKN1 (ENSCHIG00000009176)	GIPC1 (ENSCHIG00000016305)	ENSCHIG00000023424	NDUFB7 (ENSCHIG00000013480) #23	TECR (ENSCHIG00000020365) #22	ADGRE3 (ENSCHIG00000027221) #25	ZNF333 (ENSCHIG00000014600) #26	ENSCHIG00000020226	ENSCHIG00000025309	XAB2 (ENSCHIG00000011512)	CAMSAP3 (ENSCHIG00000006791)	PNPLA6 (ENSCHIG00000012296)	MCOLN1 (ENSCHIG00000004859)	ZNF358 (ENSCHIG00000009326)	TEX45 (ENSCHIG00000021310)	PEX11G (ENSCHIG00000008993)	ARHGEF18 (ENSCHIG00000014970)	ENSCHIG00000013820	INSR (ENSCHIG00000014171)	ENSCHIG00000019523
Rambouillet Sheep	MODERN SPECIES	21	IL27RA (ENSOARG00020001311)	PALM3 (ENSOARG00020001298)	MISP3 (ENSOARG00020001288)	C19orf67 (ENSOARG00020001274)	ENSOARG00020001257	PRKACA (ENSOARG00020001194)	ASF1B (ENSOARG00020001159)	ADGRL1 (ENSOARG00020000968)	ADGRE5 (ENSOARG00020000826)	DDX39A (ENSOARG00020000763)	PKN1 (ENSOARG00020000687)	PTGER1 (ENSOARG00020000667)	GIPC1 (ENSOARG00020000647)	DNAJB1 (ENSOARG00020000632)	ENSOARG00020000617	TECR (ENSOARG00020000551) #22	NDUFB7 (ENSOARG00020000517) #23	ENSOARG00020000495	ZNF333 (ENSOARG00020000475) #26	ENSOARG00020000456	ENSOARG00020000443	ENSOARG00020000434	ENSOARG00020000429	ENSOARG00020000417	ENSOARG00020000355	ENSOARG00020000328	ENSOARG00020000315	ENSOARG00020000301	ENSOARG00020000281	ENSOARG00020000254	OR7C2 (ENSOARG00020000235)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a.e	ENSGT00940000162597.f.a.f	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.a.a.a
Bos	ANCESTRAL SPECIES	3	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a.e	ENSGT00940000162597.f.a.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.a.a.a
Bos_b	ANCESTRAL SPECIES	2	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a.e	ENSGT00940000162597.f.a.f.a	ENSGT00940000164113	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.a.a.a
Hybrid Bos Indicus	MODERN SPECIES	26	RLN3 (ENSBIXG00005020471)	IL27RA (ENSBIXG00005020455)	PALM3 (ENSBIXG00005020377)	C19orf67 (ENSBIXG00005007724)	ENSBIXG00005020339	PRKACA (ENSBIXG00005003422)	ASF1B (ENSBIXG00005003397)	ADGRL1 (ENSBIXG00005003365)	ADGRE5 (ENSBIXG00005020089)	DDX39A (ENSBIXG00005020009)	PKN1 (ENSBIXG00005019962)	PTGER1 (ENSBIXG00005005530)	GIPC1 (ENSBIXG00005019893)	DNAJB1 (ENSBIXG00005003246)	ENSBIXG00005000030	TECR (ENSBIXG00005006594) #22	NDUFB7 (ENSBIXG00005003201) #23	ENSBIXG00005019616 #24	ENSBIXG00005003194	ADGRE3 (ENSBIXG00005019585) #25	ZNF333 (ENSBIXG00005005523) #26	ENSBIXG00005019468	ENSBIXG00005003154	ENSBIXG00005019337	ENSBIXG00005019259	ENSBIXG00005019221	ENSBIXG00005019180	ENSBIXG00005019141	ENSBIXG00005019134	ENSBIXG00005019103	ENSBIXG00005003109
Cow	MODERN SPECIES	26	RLN3 (ENSBTAG00000038437)	IL27RA (ENSBTAG00000016933)	PALM3 (ENSBTAG00000046744)	MISP3 (ENSBTAG00000016936)	C7H19orf67 (ENSBTAG00000016937)	PRKACA (ENSBTAG00000006642)	ASF1B (ENSBTAG00000004085)	ADGRL1 (ENSBTAG00000003675)	ADGRE5 (ENSBTAG00000021818)	DDX39A (ENSBTAG00000021820)	PKN1 (ENSBTAG00000017037)	PTGER1 (ENSBTAG00000017041)	GIPC1 (ENSBTAG00000000764)	DNAJB1 (ENSBTAG00000016874)	ENSBTAG00000048525	TECR (ENSBTAG00000012632) #22	NDUFB7 (ENSBTAG00000012634) #23	ENSBTAG00000053318 #24	ADGRE3 (ENSBTAG00000002937) #25	ENSBTAG00000048788 #26	ENSBTAG00000014365	ENSBTAG00000025908	ENSBTAG00000026148	ENSBTAG00000003528	ENSBTAG00000049961	OR7A96 (ENSBTAG00000051893)	OR7A91 (ENSBTAG00000050870)	OR7A10B (ENSBTAG00000053515)	ENSBTAG00000055231	ENSBTAG00000052896	OR7A94 (ENSBTAG00000050300)
Bos_a	ANCESTRAL SPECIES	57	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000161793.`b.b	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.a.e
Wild yak	MODERN SPECIES	122	ENSBMUG00000018788	IL27RA (ENSBMUG00000018770)	PALM3 (ENSBMUG00000018718)	MISP3 (ENSBMUG00000018697)	C19orf67 (ENSBMUG00000018686)	ENSBMUG00000018679	PRKACA (ENSBMUG00000018657)	ASF1B (ENSBMUG00000018603)	ADGRL1 (ENSBMUG00000018535)	ADGRE5 (ENSBMUG00000018450)	DDX39A (ENSBMUG00000018158)	PKN1 (ENSBMUG00000017913)	GIPC1 (ENSBMUG00000017872)	DNAJB1 (ENSBMUG00000017852)	ENSBMUG00000017844	TECR (ENSBMUG00000017825) #22	NDUFB7 (ENSBMUG00000017796) #23	CLEC17A (ENSBMUG00000017778) #24	ENSBMUG00000017737	ADGRE3 (ENSBMUG00000017690) #25	ZNF333 (ENSBMUG00000017524) #26
Domestic yak	MODERN SPECIES	27	IL27RA (ENSBGRG00000023291)	PALM3 (ENSBGRG00000023457)	MISP3 (ENSBGRG00000023479)	C19orf67 (ENSBGRG00000023503)	ENSBGRG00000023541	PRKACA (ENSBGRG00000023559)	ASF1B (ENSBGRG00000000398)	ENSBGRG00000000445	ADGRL1 (ENSBGRG00000000453)	ADGRE5 (ENSBGRG00000000526)	DDX39A (ENSBGRG00000000785)	PTGER1 (ENSBGRG00000000899)	GIPC1 (ENSBGRG00000000915)	ENSBGRG00000000944	ENSBGRG00000000966	TECR (ENSBGRG00000001005) #22	NDUFB7 (ENSBGRG00000001125) #23	CLEC17A (ENSBGRG00000001160) #24	ADGRE3 (ENSBGRG00000001242) #25	ZNF333 (ENSBGRG00000001260) #26	ENSBGRG00000001274	ENSBGRG00000001282	ENSBGRG00000001285	ENSBGRG00000001294	ENSBGRG00000001311	ENSBGRG00000001319	ENSBGRG00000001325	ENSBGRG00000001334	ENSBGRG00000001371	ENSBGRG00000001386	ZNF699 (ENSBGRG00000001399)
American bison	MODERN SPECIES	3279	ENSBBBG00000019803	IL27RA (ENSBBBG00000005137)	PALM3 (ENSBBBG00000005373)	C19orf67 (ENSBBBG00000019858)	ENSBBBG00000019866	PRKACA (ENSBBBG00000005394)	ASF1B (ENSBBBG00000019950)	ADGRL1 (ENSBBBG00000005411)	ADGRE5 (ENSBBBG00000020124)	DDX39A (ENSBBBG00000005075)	PKN1 (ENSBBBG00000020183)	PTGER1 (ENSBBBG00000020190)	GIPC1 (ENSBBBG00000020208)	DNAJB1 (ENSBBBG00000020214)	ENSBBBG00000020221	TECR (ENSBBBG00000020228) #22	ENSBBBG00000005460	ADGRE3 (ENSBBBG00000020293) #25	ZNF333 (ENSBBBG00000020316) #26
Cetacea	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT01010000228731	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935
Blue whale	MODERN SPECIES	14	IL27RA (ENSBMSG00010011379)	PALM3 (ENSBMSG00010011405)	ENSBMSG00010011429	C19orf67 (ENSBMSG00010011438)	ENSBMSG00010011456	PRKACA (ENSBMSG00010011474)	ASF1B (ENSBMSG00010011510)	ADGRL1 (ENSBMSG00010011541)	ENSBMSG00010011582	ADGRE5 (ENSBMSG00010011593)	DDX39A (ENSBMSG00010011608)	PKN1 (ENSBMSG00010011639)	PTGER1 (ENSBMSG00010011682)	GIPC1 (ENSBMSG00010011689)	DNAJB1 (ENSBMSG00010011696)	TECR (ENSBMSG00010011712) #22	NDUFB7 (ENSBMSG00010011737) #23	ENSBMSG00010011745 #24	ADGRE3 (ENSBMSG00010011759) #25	ZNF333 (ENSBMSG00010011781) #26	ENSBMSG00010011792	ACP5 (ENSBMSG00010011821)	CNN1 (ENSBMSG00010011852)	ECSIT (ENSBMSG00010009916)	ZNF653 (ENSBMSG00010009937)	ELAVL3 (ENSBMSG00010009973)	PRKCSH (ENSBMSG00010010013)	ODAD3 (ENSBMSG00010010100)	RGL3 (ENSBMSG00010010241)	EPOR (ENSBMSG00010010328)	SWSAP1 (ENSBMSG00010010407)
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT01010000228731	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935
Sperm whale	MODERN SPECIES	494																TECR (ENSPCTG00005019298) #22	NDUFB7 (ENSPCTG00005019414) #23
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315
Dolphin	MODERN SPECIES	130										ADGRE5 (ENSTTRG00000007927)	DDX39A (ENSTTRG00000007931)	PKN1 (ENSTTRG00000007934)	PTGER1 (ENSTTRG00000007938)	GIPC1 (ENSTTRG00000007940)	DNAJB1 (ENSTTRG00000007944)	TECR (ENSTTRG00000007946) #22	ENSTTRG00000007947	ENSTTRG00000007948 #24	ADGRE3 (ENSTTRG00000007950) #25
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315
Vaquita	MODERN SPECIES	14	IL27RA (ENSPSNG00000002738)	PALM3 (ENSPSNG00000002710)	MISP3 (ENSPSNG00000002687)	C19orf67 (ENSPSNG00000002664)	ENSPSNG00000002646	PRKACA (ENSPSNG00000002590)	ASF1B (ENSPSNG00000002544)	ENSPSNG00000002523	ADGRL1 (ENSPSNG00000002424)	ADGRE5 (ENSPSNG00000002347)	DDX39A (ENSPSNG00000002289)	PKN1 (ENSPSNG00000002181)	PTGER1 (ENSPSNG00000002125)	GIPC1 (ENSPSNG00000002103)	DNAJB1 (ENSPSNG00000002073)	TECR (ENSPSNG00000002013) #22	NDUFB7 (ENSPSNG00000001975) #23	ADGRE3 (ENSPSNG00000001897) #25	ZNF333 (ENSPSNG00000001772) #26	ACP5 (ENSPSNG00000001749)	ELOF1 (ENSPSNG00000001730)	CNN1 (ENSPSNG00000001706)	ECSIT (ENSPSNG00000001684)	ZNF653 (ENSPSNG00000001656)	ELAVL3 (ENSPSNG00000001621)	PRKCSH (ENSPSNG00000001577)	ODAD3 (ENSPSNG00000001523)	RGL3 (ENSPSNG00000001440)	EPOR (ENSPSNG00000001396)	SWSAP1 (ENSPSNG00000001369)	PLPPR2 (ENSPSNG00000001339)
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00940000162597.f.b	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315
Narwhal	MODERN SPECIES	298	IL27RA (ENSMMNG00015004231)	PALM3 (ENSMMNG00015004214)	ENSMMNG00015004199	C19orf67 (ENSMMNG00015004181)	SAMD1 (ENSMMNG00015004164)	PRKACA (ENSMMNG00015004129)	ASF1B (ENSMMNG00015004096)	ENSMMNG00015004077	ADGRL1 (ENSMMNG00015004047)	ADGRE5 (ENSMMNG00015003986)	DDX39A (ENSMMNG00015003930)	PKN1 (ENSMMNG00015003762)	PTGER1 (ENSMMNG00015003715)	GIPC1 (ENSMMNG00015003691)	DNAJB1 (ENSMMNG00015003664)	TECR (ENSMMNG00015003628) #22	NDUFB7 (ENSMMNG00015003602) #23	CLEC17A (ENSMMNG00015003580) #24	ADGRE3 (ENSMMNG00015003503) #25	ZNF333 (ENSMMNG00015003442) #26	ENSMMNG00015003429	ENSMMNG00015003401	ACP5 (ENSMMNG00015003380)	ELOF1 (ENSMMNG00015003361)	CNN1 (ENSMMNG00015003334)	ECSIT (ENSMMNG00015003280)	ZNF653 (ENSMMNG00015003234)	ELAVL3 (ENSMMNG00015003200)	PRKCSH (ENSMMNG00015003159)	ODAD3 (ENSMMNG00015003097)	RGL3 (ENSMMNG00015003051)
Beluga whale	MODERN SPECIES	27	IL27RA (ENSDLEG00000021870)	PALM3 (ENSDLEG00000021872)	ENSDLEG00000021874	C19orf67 (ENSDLEG00000021875)	SAMD1 (ENSDLEG00000021876)	PRKACA (ENSDLEG00000021881)	ASF1B (ENSDLEG00000021883)	ADGRL1 (ENSDLEG00000021884)	ENSDLEG00000021886	ADGRE5 (ENSDLEG00000021887)	DDX39A (ENSDLEG00000021889)	PKN1 (ENSDLEG00000021891)	PTGER1 (ENSDLEG00000021895)	GIPC1 (ENSDLEG00000021897)	DNAJB1 (ENSDLEG00000021899)	TECR (ENSDLEG00000021901) #22	NDUFB7 (ENSDLEG00000021905) #23	ENSDLEG00000021906 #24	ADGRE3 (ENSDLEG00000021909) #25	ZNF333 (ENSDLEG00000003189) #26	ENSDLEG00000003201
Suina	ANCESTRAL SPECIES	16	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163161 #26	ENSGT00950000183216.d.a.b.b.b	ENSGT00950000183216.d.a.a.b.a.b.a	ENSGT00950000183216.d.a.b.b.a.e	ENSGT00940000163967.a	ENSGT00940000162084.cb.b	ENSGT00940000159972 #27	ENSGT00390000003207 #28	ENSGT00940000162117 #29	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035
Chacoan peccary	MODERN SPECIES	769	RFX1 (ENSCWAG00000006056)	RLN3 (ENSCWAG00000006130)	IL27RA (ENSCWAG00000006159)	PALM3 (ENSCWAG00000006223)	MISP3 (ENSCWAG00000006355)	C19orf67 (ENSCWAG00000006377)	ENSCWAG00000006416	PRKACA (ENSCWAG00000006513)	ASF1B (ENSCWAG00000006659)	ADGRL1 (ENSCWAG00000006767)	ADGRE5 (ENSCWAG00000006860)	DDX39A (ENSCWAG00000006956)	PKN1 (ENSCWAG00000007028)	GIPC1 (ENSCWAG00000007165)	DNAJB1 (ENSCWAG00000007194)	TECR (ENSCWAG00000007221) #22	NDUFB7 (ENSCWAG00000007289) #23	ENSCWAG00000007312 #24	ADGRE3 (ENSCWAG00000007344) #25	ZNF333 (ENSCWAG00000007443) #26	ADGRE2 (ENSCWAG00000007489)	ENSCWAG00000007597	ENSCWAG00000007617	ENSCWAG00000007663	ENSCWAG00000007696	OR7C1 (ENSCWAG00000007736)	ENSCWAG00000007763	ENSCWAG00000007788	ENSCWAG00000007822	ENSCWAG00000007881	ENSCWAG00000007935
Pig	MODERN SPECIES	10	RLN3 (ENSSSCG00000013765)	IL27RA (ENSSSCG00000013766)	PALM3 (ENSSSCG00000013767)	ENSSSCG00000013768	C19orf67 (ENSSSCG00000013769)	ENSSSCG00000033298	PRKACA (ENSSSCG00000013771)	ASF1B (ENSSSCG00000013772)	ADGRL1 (ENSSSCG00000013773)	ADGRE5 (ENSSSCG00000013775)	DDX39A (ENSSSCG00000013776)	PKN1 (ENSSSCG00000013779)	PTGER1 (ENSSSCG00000013782)	GIPC1 (ENSSSCG00000032842)	DNAJB1 (ENSSSCG00000013784)	ENSSSCG00000031299 #22	NDUFB7 (ENSSSCG00000013778) #23	CLEC17A (ENSSSCG00000013777) #24	ADGRE3 (ENSSSCG00000013787) #25	ZNF333 (ENSSSCG00000013786) #26	ENSSSCG00000021675	ENSSSCG00000056006	ENSSSCG00000036342	ENSSSCG00000049285	ENSSSCG00000038517	ENSSSCG00000053632	ENSSSCG00000052059	ENSSSCG00000013788	ENSSSCG00000054799	ENSSSCG00000060783	ENSSSCG00000044882
Atlantogenata	ANCESTRAL SPECIES	41	ENSGT01050000244879.a.b	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25
Afrotheria	ANCESTRAL SPECIES	38	ENSGT01050000244879.a.b	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000162597
Tenrec	MODERN SPECIES	253																ENSETEG00000020013 #22	NDUFB7 (ENSETEG00000020016) #23
Afrotheria_a	ANCESTRAL SPECIES	39	ENSGT01050000244879.a.b	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000162597
Elephant	MODERN SPECIES	270	ENSLAFG00000027060	DCAF15 (ENSLAFG00000010147)	RFX1 (ENSLAFG00000010160)	IL27RA (ENSLAFG00000005271)	ENSLAFG00000027272	C19orf67 (ENSLAFG00000021923)	SAMD1 (ENSLAFG00000004736)	PRKACA (ENSLAFG00000004743)	ASF1B (ENSLAFG00000004745)	ADGRL1 (ENSLAFG00000015188)	ADGRE5 (ENSLAFG00000010516)	DDX39A (ENSLAFG00000022777)	PKN1 (ENSLAFG00000022604)	PTGER1 (ENSLAFG00000030343)	DNAJB1 (ENSLAFG00000003603)	TECR (ENSLAFG00000026923) #22	NDUFB7 (ENSLAFG00000028523) #23	ENSLAFG00000017694 #24	ADGRE3 (ENSLAFG00000017698) #25	ADGRE2 (ENSLAFG00000003847)	ENSLAFG00000030042	ENSLAFG00000029476	ENSLAFG00000028571	ENSLAFG00000030557	ENSLAFG00000029142	ENSLAFG00000026056	ENSLAFG00000029358	ENSLAFG00000031637	ENSLAFG00000028764	ENSLAFG00000025860	ENSLAFG00000028379
Hyrax	MODERN SPECIES	144																TECR (ENSPCAG00000008817) #22	NDUFB7 (ENSPCAG00000008888) #23
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000162952	ENSGT00940000162186	ENSGT00390000004692.d.a	ENSGT00520000059915	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163334	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a	ENSGT00940000160446	ENSGT00940000165414	ENSGT00940000154063.C.a.b	ENSGT01060000248544.a.a.b.a.a	ENSGT00390000006744	ENSGT00390000006244
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000163334	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a	ENSGT00940000160446	ENSGT00940000165414	ENSGT00940000154063.C.a.b	ENSGT01060000248544.a.a.b.a.a	ENSGT00390000006744	ENSGT00390000006244
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT01050000246822	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a	ENSGT00940000160446	ENSGT00940000165414	ENSGT00940000154063.C.a.b	ENSGT01060000248544.a.a.b.a.a	ENSGT00390000006744	ENSGT00390000006244	ENSGT00940000164486
Diprotodontia_a	DUPLICATION
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT01050000246822	ENSGT00390000009916	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b.q #22	ENSGT00390000018759 #23	ENSGT00940000163153 #24	ENSGT00940000163037 #25	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a	ENSGT00940000160446	ENSGT00940000165414	ENSGT00940000154063.C.a.b	ENSGT01060000248544.a.a.b.a.a	ENSGT00390000006744	ENSGT00390000006244	ENSGT00940000164486
Common wonbat	MODERN SPECIES	580	RLN3 (ENSVURG00010024221)	ENSVURG00010024222	ENSVURG00010024226	ENSVURG00010024229	C19orf67 (ENSVURG00010024230)	SAMD1 (ENSVURG00010024236)	ENSVURG00010024240	ASF1B (ENSVURG00010024248)	ADGRL1 (ENSVURG00010024253)	ENSVURG00010024260	DDX39A (ENSVURG00010024264)	PKN1 (ENSVURG00010024275)	PTGER1 (ENSVURG00010024284)	GIPC1 (ENSVURG00010024287)	DNAJB1 (ENSVURG00010024288)	ENSVURG00010024291 #22	ENSVURG00010024295 #23	ENSVURG00010024296 #24	ENSVURG00010024299	ENSVURG00010024303	VAV1 (ENSVURG00010024310)	SH2D3A (ENSVURG00010024329)	TRIP10 (ENSVURG00010024332)	GPR108 (ENSVURG00010024334)	ENSVURG00010024336	C3 (ENSVURG00010024341)	TNFSF14 (ENSVURG00010024348)	ENSVURG00010024351	ENSVURG00010024356	ENSVURG00010024360	DENND1C (ENSVURG00010024363)
koala	MODERN SPECIES	407									ENSPCIG00000029782	ENSPCIG00000029783	DDX39A (ENSPCIG00000029788)	PKN1 (ENSPCIG00000029789)	PTGER1 (ENSPCIG00000029793)	GIPC1 (ENSPCIG00000029795)	DNAJB1 (ENSPCIG00000029796)	ENSPCIG00000029799 #22	NDUFB7 (ENSPCIG00000029804) #23	ENSPCIG00000029809 #24	ENSPCIG00000029816 #25	ENSPCIG00000013823	ENSPCIG00000013826
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000166249	ENSGT00950000182951.A.b	ENSGT00940000155148.b	ENSGT00940000156833	ENSGT00940000159093	ENSGT00940000155575	ENSGT00940000157054	ENSGT00940000156505	ENSGT00940000157338	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00950000182886.a.a.b.r #22	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.jb	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b	ENSGT01070000253837	ENSGT00390000013965	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b
Common wonbat	MODERN SPECIES	1037	FAM20A (ENSVURG00010012548)	PRKAR1A (ENSVURG00010012561)	WIPI1 (ENSVURG00010012573)	ARSG (ENSVURG00010012594)	SLC16A6 (ENSVURG00010012618)	GNA13 (ENSVURG00010012633)	ENSVURG00010012641	ENSVURG00010012650	AXIN2 (ENSVURG00010012664)	CEP112 (ENSVURG00010012711)	APOH (ENSVURG00010012822)	PRKCA (ENSVURG00010012893)	CACNG4 (ENSVURG00010014798)	CACNG1 (ENSVURG00010014809)	HELZ (ENSVURG00010014820)	ENSVURG00010014839 #22	PSMD12 (ENSVURG00010014852)	PITPNC1 (ENSVURG00010014881)	NOL11 (ENSVURG00010014960)	BPTF (ENSVURG00010015020)	ENSVURG00010015433	ENSVURG00010015438	KPNA2 (ENSVURG00010015443)	SMURF2 (ENSVURG00010015459)	CEP95 (ENSVURG00010015481)	DDX5 (ENSVURG00010015520)	POLG2 (ENSVURG00010015539)	PECAM1 (ENSVURG00010015547)	ENSVURG00010015572	CSNK1D (ENSVURG00010015585)	SLC16A3 (ENSVURG00010015602)
koala	MODERN SPECIES	87	FAM20A (ENSPCIG00000007015)	PRKAR1A (ENSPCIG00000007013)	WIPI1 (ENSPCIG00000007241)	ENSPCIG00000035972	SLC16A6 (ENSPCIG00000007002)	ARSG (ENSPCIG00000007240)	GNA13 (ENSPCIG00000006993)	RGS9 (ENSPCIG00000006984)	AXIN2 (ENSPCIG00000006978)	CEP112 (ENSPCIG00000030147)	APOH (ENSPCIG00000030142)	PRKCA (ENSPCIG00000030859)	CACNG4 (ENSPCIG00000032605)	CACNG1 (ENSPCIG00000030132)	HELZ (ENSPCIG00000030106)	ENSPCIG00000019275 #22	PSMD12 (ENSPCIG00000019279)	ENSPCIG00000019289	PITPNC1 (ENSPCIG00000019281)	NOL11 (ENSPCIG00000019293)	BPTF (ENSPCIG00000009740)	ENSPCIG00000009665	ENSPCIG00000031275	ENSPCIG00000028186	ENSPCIG00000016932	KPNA2 (ENSPCIG00000016934)	SMURF2 (ENSPCIG00000019300)	CEP95 (ENSPCIG00000019319)	DDX5 (ENSPCIG00000014428)	POLG2 (ENSPCIG00000014426)	PECAM1 (ENSPCIG00000014423)
Wallaby	MODERN SPECIES	798																TECR (ENSMEUG00000011081) #22	ENSMEUG00000011102 #23
Tasmanian devil	MODERN SPECIES		ENSSHAG00000025486	ENSSHAG00000009701	ENSSHAG00000009514	ENSSHAG00000023995	C19orf67 (ENSSHAG00000027453)	ENSSHAG00000024156	ENSSHAG00000009246	ASF1B (ENSSHAG00000009083)	ADGRL1 (ENSSHAG00000008368)	ADGRE5 (ENSSHAG00000005642)	DDX39A (ENSSHAG00000005494)	PKN1 (ENSSHAG00000004829)	PTGER1 (ENSSHAG00000029759)	GIPC1 (ENSSHAG00000004295)	DNAJB1 (ENSSHAG00000003951)	TECR (ENSSHAG00000001027) #22	NDUFB7 (ENSSHAG00000025469) #23	ENSSHAG00000021297 #24	ENSSHAG00000001861	ENSSHAG00000003996	ENSSHAG00000005806	ENSSHAG00000023408	ENSSHAG00000006472	ENSSHAG00000006305	VAV1 (ENSSHAG00000004661)	SH2D3A (ENSSHAG00000004505)	TRIP10 (ENSSHAG00000004338)	GPR108 (ENSSHAG00000003841)	ENSSHAG00000003735	C3 (ENSSHAG00000028091)	ENSSHAG00000024632
Opossum	MODERN SPECIES	2	RLN3 (ENSMODG00000038451)	ENSMODG00000012066	ENSMODG00000041791	C19orf67 (ENSMODG00000012075)	SAMD1 (ENSMODG00000011961)	PRKACA (ENSMODG00000012087)	ASF1B (ENSMODG00000012099)	ENSMODG00000048905	ADGRL1 (ENSMODG00000012145)	ADGRE5 (ENSMODG00000002432)	DDX39A (ENSMODG00000002448)	PKN1 (ENSMODG00000002524)	PTGER1 (ENSMODG00000002532)	GIPC1 (ENSMODG00000002551)	DNAJB1 (ENSMODG00000045899)	TECR (ENSMODG00000002590) #22	NDUFB7 (ENSMODG00000002596) #23	ENSMODG00000002652	ENSMODG00000025645	ENSMODG00000002364	ADGRE1 (ENSMODG00000002338)	VAV1 (ENSMODG00000002314)	SH2D3A (ENSMODG00000002291)	TRIP10 (ENSMODG00000002259)	ENSMODG00000002176	ENSMODG00000002151	C3 (ENSMODG00000002143)	TNFSF14 (ENSMODG00000002091)	ENSMODG00000024010	ENSMODG00000001954	ENSMODG00000002060
Platypus	MODERN SPECIES	18	SOX13 (ENSOANG00000014941)	ENSOANG00000041876	ENSOANG00000049909	ENSOANG00000002994	ENSOANG00000037527	ENSOANG00000042058	ENSOANG00000006300	ASF1B (ENSOANG00000041328)	ENSOANG00000041175	ADGRL1 (ENSOANG00000014440)	ENSOANG00000022449	PTGER1 (ENSOANG00000015204)	PKN1 (ENSOANG00000007494)	GIPC1 (ENSOANG00000003638)	DNAJB1 (ENSOANG00000042741)	TECR (ENSOANG00000003868) #22	NDUFB7 (ENSOANG00000050858) #23	ENSOANG00000049128 #24	SNRPE (ENSOANG00000003101)	ENSOANG00000001915	ENSOANG00000041647	ATP2B4 (ENSOANG00000001912)	PRELP (ENSOANG00000045232)	FMOD (ENSOANG00000043665)	BTG2 (ENSOANG00000040119)	ENSOANG00000044868	CHIT1 (ENSOANG00000001909)	CHI3L1 (ENSOANG00000001907)	MYBPH (ENSOANG00000001906)	ADORA1 (ENSOANG00000043717)	MYOG (ENSOANG00000002107)
Sauria	ANCESTRAL SPECIES	58																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000161836	ENSGT00390000000976	ENSGT00940000157017.b	ENSGT00390000016177	ENSGT00940000160045	ENSGT00940000162025	ENSGT00390000016884	ENSGT00940000159311.c	ENSGT00940000159311.d.a.a	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00940000156166.b	ENSGT00940000153846.a.b	ENSGT00830000128645.a
Archelosauria	ANCESTRAL SPECIES	175																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Cryptodira	ANCESTRAL SPECIES	42	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23
Testudinoidea	ANCESTRAL SPECIES	92											ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000160666.n
Emydidae	ANCESTRAL SPECIES	151											ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000160666.n
painted turtle	MODERN SPECIES	850									DDX39A (ENSCPBG00000011879)	PKN1 (ENSCPBG00000011851)	C19orf67 (ENSCPBG00000011838)	ENSCPBG00000011817	PTGER1 (ENSCPBG00000011808)	GIPC1 (ENSCPBG00000011802)	DNAJB1 (ENSCPBG00000011797)	TECR (ENSCPBG00000011788) #22	NDUFB7 (ENSCPBG00000011786) #23	ENSCPBG00000011768	ENSCPBG00000011761	ENSCPBG00000011757	ENSCPBG00000011748	ASF1B (ENSCPBG00000011742)	ENSCPBG00000011739	ADGRL1 (ENSCPBG00000010267)	ENSCPBG00000010196	ENSCPBG00000010171	EVI5L (ENSCPBG00000010149)	ENSCPBG00000010137	MAP2K7 (ENSCPBG00000010125)	ENSCPBG00000010121	LRRC8E (ENSCPBG00000010120)
Three-toed box turtle	MODERN SPECIES	211										PKN1 (ENSTMTG00000003775)	C19orf67 (ENSTMTG00000003717)	ENSTMTG00000003684	PTGER1 (ENSTMTG00000003672)	ENSTMTG00000003657	DNAJB1 (ENSTMTG00000003646)	TECR (ENSTMTG00000003585) #22	NDUFB7 (ENSTMTG00000003566) #23	ENSTMTG00000003401
Testudinidae	ANCESTRAL SPECIES	41	ENSGT00940000155151.b	ENSGT00390000017201.j	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a.e.a	ENSGT00390000004692.d.a.k	ENSGT00940000159684.jb	ENSGT00980000199422	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000160666.n
Abingdon island giant tortoise	MODERN SPECIES	800	ENSCABG00000015364	ENSCABG00000015361	ENSCABG00000015344	ENSCABG00000015338	ENSCABG00000015334	ASF1B (ENSCABG00000015331)	ENSCABG00000015326	ADGRL1 (ENSCABG00000015322)	ADGRE5 (ENSCABG00000015315)	DDX39A (ENSCABG00000015309)	PKN1 (ENSCABG00000015299)	C19orf67 (ENSCABG00000015265)	PTGER1 (ENSCABG00000015255)	GIPC1 (ENSCABG00000015253)	DNAJB1 (ENSCABG00000015252)	TECR (ENSCABG00000015250) #22	NDUFB7 (ENSCABG00000015247) #23	ENSCABG00000015203	ENSCABG00000015194	ENSCABG00000015192	ENSCABG00000015183
Goode s thornscrub tortoise	MODERN SPECIES	147	ENSGEVG00005013180	ENSGEVG00005013324	ENSGEVG00005013360	ENSGEVG00005013464	ENSGEVG00005013574	ADGRL1 (ENSGEVG00005014814)	ENSGEVG00005019766	ADGRE5 (ENSGEVG00005019786)	DDX39A (ENSGEVG00005019887)	PKN1 (ENSGEVG00005019922)	C19orf67 (ENSGEVG00005019979)	ENSGEVG00005020028	PTGER1 (ENSGEVG00005020041)	GIPC1 (ENSGEVG00005020045)	DNAJB1 (ENSGEVG00005020055)	TECR (ENSGEVG00005020060) #22	ENSGEVG00005020072	ENSGEVG00005020095	ENSGEVG00005020110	ENSGEVG00005020118	ENSGEVG00005020127	ENSGEVG00005020142	ENSGEVG00005020156	ENSGEVG00005020168
Chinese turtle	MODERN SPECIES	1773	LRRC8E (ENSPSIG00000015851)	ENSPSIG00000014961	ENSPSIG00000014905	ENSPSIG00000014901	ENSPSIG00000014825	ENSPSIG00000013223	ASF1B (ENSPSIG00000013109)	ADGRL1 (ENSPSIG00000011902)	ENSPSIG00000011780	DDX39A (ENSPSIG00000011417)	PKN1 (ENSPSIG00000009269)	ENSPSIG00000008343	PTGER1 (ENSPSIG00000007226)	GIPC1 (ENSPSIG00000007039)	DNAJB1 (ENSPSIG00000006672)	TECR (ENSPSIG00000017736) #22	NDUFB7 (ENSPSIG00000017656) #23
Archosauria	ANCESTRAL SPECIES	67																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000167422	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000161423	ENSGT00940000158718	ENSGT00950000183036.b
Aves	ANCESTRAL SPECIES	34																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000167422	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000161423	ENSGT00940000158718	ENSGT00950000183036.b
Neognathae	ANCESTRAL SPECIES	34																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000167422	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000161423	ENSGT00940000158718	ENSGT00940000155021
Galloanserae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b #22
Chicken	MODERN SPECIES	23	ENSGALG00010003158	C3 (ENSGALG00010003164)	ILVBL (ENSGALG00010003468)	ENSGALG00010003476	SYDE1 (ENSGALG00010003479)	PNPLA6 (ENSGALG00010003585)	MCOLN1 (ENSGALG00010003627)	CYP4F11 (ENSGALG00010003634)	PGLYRP2 (ENSGALG00010003811)	RASAL3 (ENSGALG00010003815)	RASAL3 (ENSGALG00010003842)	AKAP8L (ENSGALG00010003865)	AKAP8 (ENSGALG00010003875)	GIPC1 (ENSGALG00010003887)	DNAJB1 (ENSGALG00010003909)	TECR (ENSGALG00010003933) #22	DCAF15 (ENSGALG00010002857)	CC2D1A (ENSGALG00010003191)	ENSGALG00010003208	ENSGALG00010003211	ENSGALG00010003245	MRI1 (ENSGALG00010003248)	YJU2B (ENSGALG00010003249)	MAST1 (ENSGALG00010002518)	LPAR2 (ENSGALG00010002533)	PBX4 (ENSGALG00010002547)	DSN1 (ENSGALG00010003968)	MVB12A (ENSGALG00010002573)	ATP13A1 (ENSGALG00010002581)	ENSGALG00010002597	ENSGALG00010002606
Neognathae_b	ANCESTRAL SPECIES	10																ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00940000167422	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000161423	ENSGT00940000158718	ENSGT00940000155021
Neognathae_c	ANCESTRAL SPECIES																	ENSGT00950000182886.a.a.b #22
Golden eagle	MODERN SPECIES	2	ENSACCG00020005481	VAV1 (ENSACCG00020005288)	C3 (ENSACCG00020004493)	TNFSF14 (ENSACCG00020003613)	ILVBL (ENSACCG00020003587)	SYDE1 (ENSACCG00020003564)	ENSACCG00020003551	ENSACCG00020003543	MCOLN1 (ENSACCG00020003343)	PGLYRP2 (ENSACCG00020003313)	ENSACCG00020003295	WIZ (ENSACCG00020003274)	AKAP8L (ENSACCG00020003203)	AKAP8 (ENSACCG00020003131)	BRD4 (ENSACCG00020003099)	TECR (ENSACCG00020003055) #22	ENSACCG00020003044	DNAJB1 (ENSACCG00020003032)	GIPC1 (ENSACCG00020003020)	ENSACCG00020002999	GBP6 (ENSACCG00020002983)	ENSACCG00020002976	ENSACCG00020002962	ENSACCG00020002947	OR10Z1 (ENSACCG00020002930)	LRRTM3 (ENSACCG00020002925)	CTNNA3 (ENSACCG00020002910)	DNAJC12 (ENSACCG00020002889)	SIRT1 (ENSACCG00020002874)	HERC4 (ENSACCG00020002838)	MYPN (ENSACCG00020002779)
Passeriformes	ANCESTRAL SPECIES	73												ENSGT00940000159125	ENSGT00940000154063.C.a.b	ENSGT00940000158035	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140
Great tit	MODERN SPECIES	287												ENSPMJG00000002203	ENSPMJG00000002223	EVI5L (ENSPMJG00000002230)	GIPC1 (ENSPMJG00000002256)	TECR (ENSPMJG00000002272) #22	ENSPMJG00000002286	TRAPPC5 (ENSPMJG00000002296)	PCP2 (ENSPMJG00000002303)	XAB2 (ENSPMJG00000002318)	ENSPMJG00000002340	EMC10 (ENSPMJG00000002345)	ENSPMJG00000002407	ENSPMJG00000002415	UBL5 (ENSPMJG00000002443)	ENSPMJG00000002445	ENSPMJG00000002448	MAP2K7 (ENSPMJG00000002457)
Passeriformes_d	ANCESTRAL SPECIES	70												ENSGT00940000159125	ENSGT00940000154063.C.a.b	ENSGT00940000158035	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140
Passeriformes_g	ANCESTRAL SPECIES	84												ENSGT00940000159125	ENSGT00940000154063.C.a.b	ENSGT00940000158035	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140
Passeroidea	ANCESTRAL SPECIES	87												ENSGT00940000159125	ENSGT00940000154063.C.a.b	ENSGT00940000158035	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140
Zebra finch	MODERN SPECIES	24	S1PR2 (ENSTGUG00000019457)	ENSTGUG00000028832	ATP13A1 (ENSTGUG00000029426)	ENSTGUG00000020110	ENSTGUG00000026563	PIN1 (ENSTGUG00000028004)	OLFM2 (ENSTGUG00000020356)	WDR83OS (ENSTGUG00000027701)	WDR83 (ENSTGUG00000024056)	DHPS (ENSTGUG00000025561)	ENSTGUG00000028777	C3 (ENSTGUG00000026277)	ENSTGUG00000026606	ENSTGUG00000026029	DNAJB1 (ENSTGUG00000028620)	TECR (ENSTGUG00000029298) #22	NDUFB7 (ENSTGUG00000019936) #23	TRAPPC5 (ENSTGUG00000023204)	PCP2 (ENSTGUG00000018878)	ENSTGUG00000020304	XAB2 (ENSTGUG00000029015)	ENSTGUG00000026107	ENSTGUG00000022595	ENSTGUG00000022079	ENSTGUG00000026867	ENSTGUG00000023637	ENSTGUG00000019157	ENSTGUG00000025465	ENSTGUG00000026670	ENSTGUG00000019233	ENSTGUG00000022243
Lepidosauria	ANCESTRAL SPECIES	78	ENSGT00940000153846.a.b	ENSGT00530000063861.a	ENSGT00940000158914	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000162906.c.a	ENSGT00940000157017.b	ENSGT00390000016177	ENSGT00940000160045	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00940000164497	ENSGT00940000156233	ENSGT00940000162790.a
tuatara	MODERN SPECIES	1072												PTGER1 (ENSSPUG00000001303)	ENSSPUG00000001299	ENSSPUG00000001295	DNAJB1 (ENSSPUG00000001282)	TECR (ENSSPUG00000001243) #22	ENSSPUG00000001237	TRAPPC5 (ENSSPUG00000001231)	ENSSPUG00000001227	KISS1R (ENSSPUG00000001211)	XAB2 (ENSSPUG00000001123)	ENSSPUG00000001108	NOTCH3 (ENSSPUG00000000802)	ENSSPUG00000000775	ENSSPUG00000000671	ENSSPUG00000000639	AKAP8L (ENSSPUG00000000622)	WIZ (ENSSPUG00000000555)	RASAL3 (ENSSPUG00000000481)	ENSSPUG00000000473	PGLYRP2 (ENSSPUG00000000448)
Episquamata	ANCESTRAL SPECIES	4	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00980000199422	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000157017.b	ENSGT00390000016177.a.a	ENSGT00940000160045	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00940000164497	ENSGT00940000156233	ENSGT00940000162790.a	ENSGT00940000153385.b.a.b
Laterata	ANCESTRAL SPECIES	1	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00980000199422	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00940000162906.c.a	ENSGT00390000000976	ENSGT00940000157017.b	ENSGT00390000016177.a.a	ENSGT00940000160045	ENSGT00940000162025	ENSGT00390000016884	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00940000160234	ENSGT00940000156233.n	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000021473	ENSPMRG00000021458	ENSPMRG00000021450	ENSPMRG00000021427	ENSPMRG00000021415	ENSPMRG00000021407	ADGRL1 (ENSPMRG00000021357)	ADGRE5 (ENSPMRG00000021316)	DDX39A (ENSPMRG00000021292)	C19orf67 (ENSPMRG00000021272)	PKN1 (ENSPMRG00000021243)	ENSPMRG00000021220	PTGER1 (ENSPMRG00000021214)	GIPC1 (ENSPMRG00000021205)	DNAJB1 (ENSPMRG00000021195)	TECR (ENSPMRG00000021182) #22	NDUFB7 (ENSPMRG00000021174) #23	ENSPMRG00000021170	ENSPMRG00000021163	ENSPMRG00000021158	ENSPMRG00000021156	ENSPMRG00000021150	ENSPMRG00000021143	TRAPPC5 (ENSPMRG00000021136)	ENSPMRG00000021134	ENSPMRG00000021125	ENSPMRG00000021116	ENSPMRG00000021107	STXBP2 (ENSPMRG00000021082)	PCP2 (ENSPMRG00000021070)	ENSPMRG00000021066
Argentine black and white tegu	MODERN SPECIES	1	LRRC8E (ENSSMRG00000004563)	ENSSMRG00000004565	ENSSMRG00000004567	ENSSMRG00000004570	ENSSMRG00000004635	ASF1B (ENSSMRG00000004645)	ADGRL1 (ENSSMRG00000004800)	ADGRE5 (ENSSMRG00000004869)	DDX39A (ENSSMRG00000004884)	C19orf67 (ENSSMRG00000004900)	PKN1 (ENSSMRG00000004927)	ENSSMRG00000004951	PTGER1 (ENSSMRG00000004952)	GIPC1 (ENSSMRG00000004998)	DNAJB1 (ENSSMRG00000004999)	TECR (ENSSMRG00000005001) #22	ENSSMRG00000005015 #23	ENSSMRG00000005021	TRAPPC5 (ENSSMRG00000005055)	ENSSMRG00000005061	ENSSMRG00000005070	ENSSMRG00000005077	STXBP2 (ENSSMRG00000005084)	PCP2 (ENSSMRG00000005124)	PET100 (ENSSMRG00000005134)	XAB2 (ENSSMRG00000005137)	ENSSMRG00000005147	ENSSMRG00000005150	NOTCH3 (ENSSMRG00000005174)	ENSSMRG00000005200	ENSSMRG00000005212
Toxicofera	ANCESTRAL SPECIES	3	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00980000199422	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000159286.b	ENSGT00390000016177.b	ENSGT00940000160045	ENSGT00940000162025	ENSGT00940000175175	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979
Elapidae	ANCESTRAL SPECIES	2	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00980000199422	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000159286.b	ENSGT00940000160045	ENSGT00940000162025	ENSGT00940000175175	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000155709	ENSGT00940000157510
Indian cobra	MODERN SPECIES	1	ENSNNAG00000008971	ENSNNAG00000009175	ENSNNAG00000009215	ENSNNAG00000009238	ASF1B (ENSNNAG00000009273)	ADGRL1 (ENSNNAG00000009291)	ENSNNAG00000009395	ENSNNAG00000009422	DDX39A (ENSNNAG00000009476)	C19orf67 (ENSNNAG00000009500)	PKN1 (ENSNNAG00000009574)	ENSNNAG00000009879	PTGER1 (ENSNNAG00000009924)	ENSNNAG00000009940	DNAJB1 (ENSNNAG00000009949)	TECR (ENSNNAG00000009971) #22	NDUFB7 (ENSNNAG00000010053) #23	TRAPPC5 (ENSNNAG00000010073)	ENSNNAG00000010093	ENSNNAG00000010159	ENSNNAG00000010194	ENSNNAG00000010221	ENSNNAG00000010233	ENSNNAG00000010285	STXBP2 (ENSNNAG00000010318)	ENSNNAG00000010384	ENSNNAG00000010419	ENSNNAG00000010481	ENSNNAG00000010532	ENSNNAG00000010557	ENSNNAG00000010572
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00940000158914	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000159286.b	ENSGT00940000160045	ENSGT00940000162025	ENSGT00940000175175	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00940000162790.a	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979	ENSGT00940000155709
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00940000158914	ENSGT01030000236111	ENSGT00940000159311.c	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b #22	ENSGT00390000018759 #23	ENSGT00390000000976	ENSGT00940000159286.b	ENSGT00960000187251.a	ENSGT00940000160045	ENSGT00940000162025	ENSGT00940000175175	ENSGT00550000075140	ENSGT00950000182975.a.b	ENSGT00980000198723	ENSGT00940000160234	ENSGT00940000162790.a	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a	ENSGT00940000159979
Eastern brown snake	MODERN SPECIES	6	ENSPTXG00000005987	ENSPTXG00000005986	ENSPTXG00000005985	ENSPTXG00000005984	ENSPTXG00000005983	ENSPTXG00000005982	ADGRL1 (ENSPTXG00000003720)	ENSPTXG00000003702	ENSPTXG00000003698	C19orf67 (ENSPTXG00000003695)	PKN1 (ENSPTXG00000003691)	ENSPTXG00000003689	PTGER1 (ENSPTXG00000003685)	GIPC1 (ENSPTXG00000003684)	DNAJB1 (ENSPTXG00000003683)	TECR (ENSPTXG00000003682) #22	NDUFB7 (ENSPTXG00000003681) #23	ENSPTXG00000003679	ENSPTXG00000003678	TRAPPC5 (ENSPTXG00000003675)	ENSPTXG00000003673	ENSPTXG00000003670	STXBP2 (ENSPTXG00000003668)	PCP2 (ENSPTXG00000003666)	ENSPTXG00000003664	XAB2 (ENSPTXG00000003662)	CAMSAP3 (ENSPTXG00000003657)	NOTCH3 (ENSPTXG00000003651)	ENSPTXG00000003645	ENSPTXG00000003642	ENSPTXG00000009691
Mainland tiger snake	MODERN SPECIES	87	ENSNSUG00000016640	LRRC8E (ENSNSUG00000016641)	ENSNSUG00000016642	ENSNSUG00000016764	ENSNSUG00000016776	ASF1B (ENSNSUG00000016790)	ADGRL1 (ENSNSUG00000016800)	ENSNSUG00000017827	ENSNSUG00000017830	C19orf67 (ENSNSUG00000017832)	PKN1 (ENSNSUG00000017835)	ENSNSUG00000017837	PTGER1 (ENSNSUG00000017839)	ENSNSUG00000017840	DNAJB1 (ENSNSUG00000017841)	TECR (ENSNSUG00000017842) #22	NDUFB7 (ENSNSUG00000017887) #23	TRAPPC5 (ENSNSUG00000017888)	ENSNSUG00000017889	ENSNSUG00000017906	STXBP2 (ENSNSUG00000017910)	PCP2 (ENSNSUG00000018039)	ENSNSUG00000018041	XAB2 (ENSNSUG00000018046)	ENSNSUG00000018058	ENSNSUG00000018059	ENSNSUG00000018060	ENSNSUG00000018061	ENSNSUG00000018062	ENSNSUG00000018063	ENSNSUG00000018064
Blue-lipped sea krait	MODERN SPECIES	994															PREX1 (ENSLLTG00000011340)	TECR (ENSLLTG00000011181) #22	NDUFB7 (ENSLLTG00000011143) #23	ENSLLTG00000011131	ENSLLTG00000011106
Lizard	MODERN SPECIES	1	BIRC5 (ENSACAG00000037931)	AFMID (ENSACAG00000016716)	tk1 (ENSACAG00000016730)	SYNGR2 (ENSACAG00000016746)	TMC8 (ENSACAG00000016750)	ENSACAG00000016792	ENSACAG00000016807	ENSACAG00000016808	ENSACAG00000043866	ENSACAG00000016840	ENSACAG00000016849	ENSACAG00000016953	PTGER1 (ENSACAG00000017009)	GIPC1 (ENSACAG00000017014)	DNAJB1 (ENSACAG00000034628)	TECR (ENSACAG00000017027) #22	NDUFB7 (ENSACAG00000017055) #23	ENSACAG00000041391	ENSACAG00000031954	ENSACAG00000038481	ENSACAG00000038624	ENSACAG00000036875	ENSACAG00000029691	ENSACAG00000036324	ENSACAG00000017105	PCP2 (ENSACAG00000017172)	ENSACAG00000020942	ENSACAG00000042266	ENSACAG00000017173	CAMSAP3 (ENSACAG00000017204)	NOTCH3 (ENSACAG00000017220)