Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000156562 #7	ENSGT00530000063405.a #8	ENSGT00940000153498.A #9	ENSGT00940000158149 #10	ENSGT00390000011249 #11	ENSGT00390000011698.c.a #12	ENSGT00940000160591.b #13	ENSGT00390000003939 #14	ENSGT00390000004094 #15	ENSGT00390000008727.a.a #16	ENSGT00940000155293.a.a #17	ENSGT00940000159629 #18	ENSGT00940000157374 #19	ENSGT00390000018683 #20	ENSGT00390000008459 #21	ENSGT00940000157388 #22	ENSGT00390000006176 #23	ENSGT00940000153568.A #24	ENSGT00940000155704 #25	ENSGT00390000003585 #26	ENSGT00390000015936 #27	ENSGT00940000156644 #28	ENSGT00940000157464 #29	ENSGT00390000003512 #30	ENSGT00940000156048 #31	ENSGT00390000011529 #32	ENSGT00940000157680 #33	ENSGT00940000153342.b #34	ENSGT00390000009258 #35	ENSGT00940000156958 #36	ENSGT00510000047893 #37
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000156562 #7	ENSGT00530000063405.a #8	ENSGT00940000153498.A #9	ENSGT00940000158149 #10	ENSGT00390000011249 #11	ENSGT00390000011698.c.a #12	ENSGT00940000160591.b #13	ENSGT00390000003939 #14	ENSGT00390000004094 #15	ENSGT00390000008727.a.a #16	ENSGT00940000155293.a.a #17	ENSGT00940000159629 #18	ENSGT00940000157374 #19	ENSGT00390000018683 #20	ENSGT00390000008459 #21	ENSGT00940000157388 #22	ENSGT00390000006176 #23	ENSGT00940000153568.A #24	ENSGT00940000155704 #25	ENSGT00390000003585 #26	ENSGT00390000015936 #27	ENSGT00940000156644 #28	ENSGT00940000157464 #29	ENSGT00390000003512 #30	ENSGT00940000156048 #31	ENSGT00390000011529 #32	ENSGT00940000157680 #33	ENSGT00940000153342.b #34	ENSGT00390000009258 #35	ENSGT00940000156958 #36	ENSGT00510000047893 #37
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000156562 #7	ENSGT00530000063405.a #8	ENSGT00940000153498.A #9	ENSGT00940000158149 #10	ENSGT00390000011249 #11	ENSGT00390000011698.c.a #12	ENSGT00940000160591.b #13	ENSGT00390000003939 #14	ENSGT00390000004094 #15	ENSGT00390000008727.a.a #16	ENSGT00940000155293.a.a #17	ENSGT00940000159629 #18	ENSGT00940000157374 #19	ENSGT00390000018683 #20	ENSGT00390000008459 #21	ENSGT00940000157388 #22	ENSGT00390000006176 #23	ENSGT00940000153568.A #24	ENSGT00940000155704 #25	ENSGT00390000003585 #26	ENSGT00390000015936 #27	ENSGT00940000156644 #28	ENSGT00940000157464 #29	ENSGT00390000003512 #30	ENSGT00940000156048 #31	ENSGT00390000011529 #32	ENSGT00940000157680 #33	ENSGT00940000153342.b #34	ENSGT00390000009258 #35	ENSGT00940000156958 #36	ENSGT00510000047893 #37
Abingdon island giant tortoise	MODERN SPECIES	1550												ENSCABG00000020151 #18	PCNX2 (ENSCABG00000020155) #19	NTPCR (ENSCABG00000020165) #20	ENSCABG00000020167 #21	SIPA1L2 (ENSCABG00000020170) #22
Goode s thornscrub tortoise	MODERN SPECIES	17	B3GALNT2 (ENSGEVG00005018885) #7	TBCE (ENSGEVG00005018765) #8	GGPS1 (ENSGEVG00005018745) #9	ARID4B (ENSGEVG00005018611) #10	RBM34 (ENSGEVG00005018583) #11	TOMM20 (ENSGEVG00005018563) #12	IRF2BP2 (ENSGEVG00005018539) #13	TARBP1 (ENSGEVG00005017990) #14	COA6 (ENSGEVG00005017812) #15	SLC35F3 (ENSGEVG00005017748) #16	KCNK1 (ENSGEVG00005017722) #17	MAP3K21 (ENSGEVG00005017703) #18	PCNX2 (ENSGEVG00005017555) #19	NTPCR (ENSGEVG00005017516) #20	MAP10 (ENSGEVG00005017479) #21	SIPA1L2 (ENSGEVG00005017196) #22	DISC1 (ENSGEVG00005016505) #23	TSNAX (ENSGEVG00005016368) #24	ENSGEVG00005016338	EGLN1 (ENSGEVG00005016318) #25	SPRTN (ENSGEVG00005016242) #26	EXOC8 (ENSGEVG00005016225) #27	RHOU (ENSGEVG00005016171) #28	RAB4A (ENSGEVG00005016142) #29	CCSAP (ENSGEVG00005016071) #30	ACTA1 (ENSGEVG00005016044) #31	NUP133 (ENSGEVG00005015997) #32	ABCB10 (ENSGEVG00005015968) #33	TAF5L (ENSGEVG00005015949) #34	URB2 (ENSGEVG00005015908) #35	GALNT2 (ENSGEVG00005015874) #36
Emydidae	ANCESTRAL SPECIES		ENSGT00530000063405.a #8	ENSGT00940000153498.A #9	ENSGT00940000158149 #10	ENSGT00390000011249 #11	ENSGT00390000011698.c.a #12	ENSGT00940000160591.b #13	ENSGT00390000003939 #14	ENSGT00390000004094 #15	ENSGT00390000008727.a.a #16	ENSGT00990000214031	ENSGT00940000155293.a.a #17	ENSGT00940000159629 #18	ENSGT00940000157374 #19	ENSGT00390000018683 #20	ENSGT00390000008459 #21	ENSGT00940000157388 #22	ENSGT00390000006176 #23	ENSGT00940000153568.A #24	ENSGT00940000155704 #25	ENSGT00390000003585 #26	ENSGT00390000015936 #27	ENSGT00940000156644 #28	ENSGT00940000157464 #29	ENSGT00390000003512 #30	ENSGT00940000156048 #31	ENSGT00390000011529 #32	ENSGT00940000157680 #33	ENSGT00940000153342.b #34	ENSGT00390000009258 #35	ENSGT00940000156958 #36	ENSGT00510000047893 #37
painted turtle	MODERN SPECIES	726	TBCE (ENSCPBG00000004350) #8	GGPS1 (ENSCPBG00000004372) #9	ARID4B (ENSCPBG00000004501) #10	ENSCPBG00000005451	RBM34 (ENSCPBG00000005460) #11	TOMM20 (ENSCPBG00000005466) #12	IRF2BP2 (ENSCPBG00000005509) #13	TARBP1 (ENSCPBG00000005587) #14	SLC35F3 (ENSCPBG00000005814) #16	ENSCPBG00000005823	KCNK1 (ENSCPBG00000005827) #17	MAP3K21 (ENSCPBG00000005841) #18	PCNX2 (ENSCPBG00000005879) #19	NTPCR (ENSCPBG00000005967) #20	MAP10 (ENSCPBG00000005985) #21	SIPA1L2 (ENSCPBG00000006006) #22	DISC1 (ENSCPBG00000006064) #23	TSNAX (ENSCPBG00000006086) #24	EGLN1 (ENSCPBG00000006097) #25	SPRTN (ENSCPBG00000006103) #26	EXOC8 (ENSCPBG00000006105) #27	RHOU (ENSCPBG00000006110) #28	RAB4A (ENSCPBG00000006118) #29	CCSAP (ENSCPBG00000006125) #30	ACTA1 (ENSCPBG00000006129) #31	NUP133 (ENSCPBG00000006137) #32	ABCB10 (ENSCPBG00000006163) #33	TAF5L (ENSCPBG00000006180) #34	URB2 (ENSCPBG00000006191) #35	GALNT2 (ENSCPBG00000006200) #36	PGBD5 (ENSCPBG00000006210) #37
Three-toed box turtle	MODERN SPECIES	31	TBCE (ENSTMTG00000020012) #8	GGPS1 (ENSTMTG00000020032) #9	ARID4B (ENSTMTG00000020065) #10	RBM34 (ENSTMTG00000020240) #11	TOMM20 (ENSTMTG00000020250) #12	IRF2BP2 (ENSTMTG00000020262) #13	TARBP1 (ENSTMTG00000020306) #14	COA6 (ENSTMTG00000020637) #15	SLC35F3 (ENSTMTG00000020642) #16	ENSTMTG00000020670	KCNK1 (ENSTMTG00000020682) #17	MAP3K21 (ENSTMTG00000020688) #18	PCNX2 (ENSTMTG00000020707) #19	NTPCR (ENSTMTG00000020796) #20	MAP10 (ENSTMTG00000020808) #21	SIPA1L2 (ENSTMTG00000020821) #22	DISC1 (ENSTMTG00000020884) #23	TSNAX (ENSTMTG00000021057) #24	EGLN1 (ENSTMTG00000021064) #25	SPRTN (ENSTMTG00000021069) #26	EXOC8 (ENSTMTG00000021077) #27	RHOU (ENSTMTG00000021083) #28	RAB4A (ENSTMTG00000021087) #29	CCSAP (ENSTMTG00000021097) #30	ENSTMTG00000021101	NUP133 (ENSTMTG00000021107) #32	ABCB10 (ENSTMTG00000021124) #33	TAF5L (ENSTMTG00000021135) #34	URB2 (ENSTMTG00000021138) #35	ENSTMTG00000021143	GALNT2 (ENSTMTG00000021148) #36
Chinese turtle	MODERN SPECIES	1009	TBCE (ENSPSIG00000012492) #8	GGPS1 (ENSPSIG00000012463) #9	ARID4B (ENSPSIG00000011632) #10	RBM34 (ENSPSIG00000011370) #11	TOMM20 (ENSPSIG00000011035) #12	IRF2BP2 (ENSPSIG00000011030) #13	TARBP1 (ENSPSIG00000010699) #14	COA6 (ENSPSIG00000010683) #15	SLC35F3 (ENSPSIG00000010402) #16	KCNK1 (ENSPSIG00000009835) #17	MAP3K21 (ENSPSIG00000009569) #18	ENSPSIG00000009107 #19	ENSPSIG00000008705 #19	NTPCR (ENSPSIG00000008305) #20	MAP10 (ENSPSIG00000008027) #21	SIPA1L2 (ENSPSIG00000005490) #22	DISC1 (ENSPSIG00000005344) #23	TSNAX (ENSPSIG00000005320) #24	EGLN1 (ENSPSIG00000005223) #25	SPRTN (ENSPSIG00000005156) #26	EXOC8 (ENSPSIG00000004997) #27	RHOU (ENSPSIG00000004910) #28