Mammalia	ANCESTRAL SPECIES	27	ENSGT00390000006707	ENSGT00940000160058	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00930000150969.A.c.b.b	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000154909	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314	ENSGT01000000222164	ENSGT00390000008225
Theria	ANCESTRAL SPECIES	56	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00930000150969.A.c.b.b	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27
Eutheria	ANCESTRAL SPECIES	11	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT01050000244818.s.a	ENSGT00950000183016.E.b.b.a.a	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00940000157252 #34	ENSGT00940000155002.b #35	ENSGT00390000018381 #36
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00940000157252 #34	ENSGT00940000155002.b #35	ENSGT00390000018381 #36
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000157511	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00390000016974.g.b #9	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34	ENSGT00940000155002.b #35
Rambouillet Sheep	MODERN SPECIES	4	HAO1 (ENSOARG00020003549) #7	ENSOARG00020003535 #8	ENSOARG00020003521 #9	BMP2 (ENSOARG00020003483) #10	FERMT1 (ENSOARG00020003426) #11	LRRN4 (ENSOARG00020003388) #12	CRLS1 (ENSOARG00020003262) #13	TRMT6 (ENSOARG00020003220) #14	MCM8 (ENSOARG00020012638) #15	CHGB (ENSOARG00020003190) #16	SHLD1 (ENSOARG00020012561) #17	GPCPD1 (ENSOARG00020012291) #18	ENSOARG00020012246 #19	PROKR2 (ENSOARG00020012210) #20	CDS2 (ENSOARG00020012047) #21	PCNA (ENSOARG00020011991) #22	TMEM230 (ENSOARG00020011962) #23	SLC23A2 (ENSOARG00020011864) #24	RASSF2 (ENSOARG00020011804) #25	PRND (ENSOARG00020011760) #26	prp (ENSOARG00020011739) #27	ZMYND11 (ENSOARG00020011355) #28	DIP2C (ENSOARG00020009237) #29	GTPBP4 (ENSOARG00020008830) #30	IDI1 (ENSOARG00020008753) #31	WDR37 (ENSOARG00020008533) #32	ENSOARG00020008482 #33	ADARB2 (ENSOARG00020008407) #34	PFKP (ENSOARG00020008287) #35	PITRM1 (ENSOARG00020008012) #36	KLF6 (ENSOARG00020007944) #37
Goat	MODERN SPECIES	4	ADRA1D (ENSCHIG00000000576)	HAO1 (ENSCHIG00000015315) #7	ENSCHIG00000020071 #9	BMP2 (ENSCHIG00000012951) #10	FERMT1 (ENSCHIG00000017194) #11	LRRN4 (ENSCHIG00000026225) #12	CRLS1 (ENSCHIG00000016897) #13	MCM8 (ENSCHIG00000014359) #15	TRMT6 (ENSCHIG00000010338) #14	CHGB (ENSCHIG00000023834) #16	SHLD1 (ENSCHIG00000014936) #17	ENSCHIG00000017069	GPCPD1 (ENSCHIG00000017440) #18	PROKR2 (ENSCHIG00000020856) #20	CDS2 (ENSCHIG00000021292) #21	PCNA (ENSCHIG00000015863) #22	ENSCHIG00000025769 #23	SLC23A2 (ENSCHIG00000015043) #24	RASSF2 (ENSCHIG00000024230) #25	PRND (ENSCHIG00000010610) #26	PRNP (ENSCHIG00000014184) #27	ZMYND11 (ENSCHIG00000024812) #28	DIP2C (ENSCHIG00000024387) #29	ENSCHIG00000008510	LARP4B (ENSCHIG00000013543)	GTPBP4 (ENSCHIG00000018346) #30	IDI1 (ENSCHIG00000023940) #31	WDR37 (ENSCHIG00000021435) #32	ADARB2 (ENSCHIG00000002677) #34	ENSCHIG00000007362	PFKP (ENSCHIG00000024946) #35
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000157511	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00390000008279.a.d	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34
American bison	DUPLICATION
American bison	MODERN SPECIES	3262															INPP4B (ENSBBBG00000005899)	ENSBBBG00000022302 #22	ENSBBBG00000022272	USP38 (ENSBBBG00000022265)	ENSBBBG00000022239	GAB1 (ENSBBBG00000022226)	SMARCA5 (ENSBBBG00000022167)	ENSBBBG00000022121	ENSBBBG00000005838
American bison	MODERN SPECIES	2997	ADRA1D (ENSBBBG00000020042)	HAO1 (ENSBBBG00000005099) #7	BMP2 (ENSBBBG00000005095) #10	FERMT1 (ENSBBBG00000020061) #11	LRRN4 (ENSBBBG00000020080) #12	CRLS1 (ENSBBBG00000020106) #13	MCM8 (ENSBBBG00000020216) #15	TRMT6 (ENSBBBG00000005465) #14	CHGB (ENSBBBG00000005469) #16	SHLD1 (ENSBBBG00000005471) #17	ENSBBBG00000005046	GPCPD1 (ENSBBBG00000005481) #18	PROKR2 (ENSBBBG00000020258) #20	ENSBBBG00000020261	CDS2 (ENSBBBG00000007444) #21	ENSBBBG00000020288 #22	ENSBBBG00000005023 #23	SLC23A2 (ENSBBBG00000020326) #24	RASSF2 (ENSBBBG00000005504) #25	PRND (ENSBBBG00000006861) #26	ENSBBBG00000020353	PRNP (ENSBBBG00000020389) #27	ZMYND11 (ENSBBBG00000020595) #28	DIP2C (ENSBBBG00000020715) #29	ENSBBBG00000005586	LARP4B (ENSBBBG00000007385)	GTPBP4 (ENSBBBG00000005599) #30	IDI1 (ENSBBBG00000020773) #31	WDR37 (ENSBBBG00000020851) #32	ENSBBBG00000020859 #33	ENSBBBG00000020867 #34
Bos	ANCESTRAL SPECIES	22	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00970000197017	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00390000008279.a.d	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00970000197017	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00390000008279.a.d	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34	ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.b
Wild yak	MODERN SPECIES	1931													PROKR2 (ENSBMUG00000005368) #20	ENSBMUG00000005373	CDS2 (ENSBMUG00000005402) #21	PCNA (ENSBMUG00000005416) #22	ENSBMUG00000005428 #23	SLC23A2 (ENSBMUG00000005440) #24	RASSF2 (ENSBMUG00000005453) #25	PRND (ENSBMUG00000005460) #26	PRNP (ENSBMUG00000005476) #27	ENSBMUG00000005488
Domestic yak	MODERN SPECIES	3	ADRA1D (ENSBGRG00000007807)	HAO1 (ENSBGRG00000007623) #7	ENSBGRG00000007577	BMP2 (ENSBGRG00000007486) #10	FERMT1 (ENSBGRG00000007227) #11	LRRN4 (ENSBGRG00000007152) #12	CRLS1 (ENSBGRG00000006980) #13	MCM8 (ENSBGRG00000006792) #15	TRMT6 (ENSBGRG00000006656) #14	CHGB (ENSBGRG00000006604) #16	SHLD1 (ENSBGRG00000006591) #17	GPCPD1 (ENSBGRG00000006350) #18	PROKR2 (ENSBGRG00000006295) #20	ENSBGRG00000006277	CDS2 (ENSBGRG00000006231) #21	PCNA (ENSBGRG00000006175) #22	ENSBGRG00000006155 #23	SLC23A2 (ENSBGRG00000006116) #24	ENSBGRG00000006100	RASSF2 (ENSBGRG00000006081) #25	PRND (ENSBGRG00000006063) #26	ENSBGRG00000006049	PRNP (ENSBGRG00000006027) #27	ZMYND11 (ENSBGRG00000005847) #28	DIP2C (ENSBGRG00000005407) #29	ENSBGRG00000005365	LARP4B (ENSBGRG00000005135)	GTPBP4 (ENSBGRG00000005018) #30	IDI1 (ENSBGRG00000004993) #31	WDR37 (ENSBGRG00000004924) #32	ADARB2 (ENSBGRG00000004784) #34
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000160795	ENSGT00390000018717.b.a.a #7	ENSGT00970000197017	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00390000008279.a.d	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000156942 #28	ENSGT00950000182997.a.a #29	ENSGT00940000157755	ENSGT00390000018475 #30	ENSGT00390000008527.k.a #31	ENSGT00930000150950.a #32	ENSGT00970000195402 #33	ENSGT00940000157252 #34	ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.b
Hybrid Bos Indicus	MODERN SPECIES	4	ENSBIXG00005001848	FERMT1 (ENSBIXG00005005403) #11	ENSBIXG00005014078	LRRN4 (ENSBIXG00005001824) #12	CRLS1 (ENSBIXG00005006734) #13	MCM8 (ENSBIXG00005013995) #15	TRMT6 (ENSBIXG00005013902) #14	CHGB (ENSBIXG00005013885) #16	ENSBIXG00005013855 #17	ENSBIXG00005013824	ENSBIXG00005013816	GPCPD1 (ENSBIXG00005013769) #18	PROKR2 (ENSBIXG00005013687) #20	ENSBIXG00005005584	CDS2 (ENSBIXG00005013645) #21	PCNA (ENSBIXG00005013593) #22	ENSBIXG00005013556 #23	SLC23A2 (ENSBIXG00005013512) #24	RASSF2 (ENSBIXG00005013429) #25	PRND (ENSBIXG00005001601) #26	PRNP (ENSBIXG00005013353) #27	ENSBIXG00005005486	ZMYND11 (ENSBIXG00005013294) #28	DIP2C (ENSBIXG00005013044) #29	ENSBIXG00005012919	GTPBP4 (ENSBIXG00005012740) #30	IDI1 (ENSBIXG00005012691) #31	WDR37 (ENSBIXG00005012625) #32	ENSBIXG00005012492 #33	ENSBIXG00005012469 #34	ENSBIXG00005012450
Cow	MODERN SPECIES	4	ADRA1D (ENSBTAG00000019504)	HAO1 (ENSBTAG00000019811) #7	ENSBTAG00000007199	BMP2 (ENSBTAG00000005111) #10	FERMT1 (ENSBTAG00000020465) #11	LRRN4 (ENSBTAG00000000066) #12	CRLS1 (ENSBTAG00000000065) #13	MCM8 (ENSBTAG00000014623) #15	TRMT6 (ENSBTAG00000001314) #14	CHGB (ENSBTAG00000011782) #16	SHLD1 (ENSBTAG00000014048) #17	GPCPD1 (ENSBTAG00000008293) #18	PROKR2 (ENSBTAG00000015872) #20	ENSBTAG00000020668	CDS2 (ENSBTAG00000006066) #21	PCNA (ENSBTAG00000006065) #22	TMEM230 (ENSBTAG00000006063) #23	SLC23A2 (ENSBTAG00000032366) #24	RASSF2 (ENSBTAG00000017346) #25	PRND (ENSBTAG00000011010) #26	ENSBTAG00000050866	PRNP (ENSBTAG00000048903) #27	ZMYND11 (ENSBTAG00000002578) #28	DIP2C (ENSBTAG00000006531) #29	ENSBTAG00000051962	LARP4B (ENSBTAG00000013899)	GTPBP4 (ENSBTAG00000014917) #30	IDI1 (ENSBTAG00000004075) #31	WDR37 (ENSBTAG00000000683) #32	ENSBTAG00000054346 #33	ADARB2 (ENSBTAG00000014194) #34
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1194				BMP2 (ENSMMSG00000008539) #10	FERMT1 (ENSMMSG00000008569) #11	LRRN4 (ENSMMSG00000008649) #12	CRLS1 (ENSMMSG00000008697) #13	MCM8 (ENSMMSG00000008795) #15	TRMT6 (ENSMMSG00000008916) #14	CHGB (ENSMMSG00000008962) #16	SHLD1 (ENSMMSG00000008988) #17	ENSMMSG00000009009	GPCPD1 (ENSMMSG00000009050) #18	PROKR2 (ENSMMSG00000009161) #20	CDS2 (ENSMMSG00000009199) #21	ENSMMSG00000009267 #22	ENSMMSG00000009298 #23	SLC23A2 (ENSMMSG00000009331) #24	RASSF2 (ENSMMSG00000009389) #25	PRND (ENSMMSG00000009444) #26	ENSMMSG00000009455	PRNP (ENSMMSG00000009466) #27	ZMYND11 (ENSMMSG00000009508) #28	DIP2C (ENSMMSG00000009968) #29	LARP4B (ENSMMSG00000010870)	GTPBP4 (ENSMMSG00000011002) #30	IDI1 (ENSMMSG00000011041) #31	WDR37 (ENSMMSG00000011078) #32	ENSMMSG00000011236 #34	PFKP (ENSMMSG00000011263) #35	PITRM1 (ENSMMSG00000011360) #36
Siberian musk deer	MODERN SPECIES	1242											LRIG3 (ENSMMSG00000016444)	ENSMMSG00000016500	SLC16A7 (ENSMMSG00000016535)	ENSMMSG00000016556	TAFA2 (ENSMMSG00000016596)	ENSMMSG00000016643 #22	ENSMMSG00000016678	MON2 (ENSMMSG00000016822)	PPM1H (ENSMMSG00000017078)	AVPR1A (ENSMMSG00000017095)	RXYLT1 (ENSMMSG00000017107)	SRGAP1 (ENSMMSG00000017138)	ENSMMSG00000017187	ENSMMSG00000017217	KICS2 (ENSMMSG00000017241)	C12orf56 (ENSMMSG00000017286)	XPOT (ENSMMSG00000017426)	TBK1 (ENSMMSG00000017508)	RASSF3 (ENSMMSG00000017582)	GNS (ENSMMSG00000017616)	ENSMMSG00000017824
Yarkand deer	MODERN SPECIES	15	ENSCHYG00000023523	HAO1 (ENSCHYG00000023357) #7	BMP2 (ENSCHYG00000023295) #10	ENSCHYG00000023250	FERMT1 (ENSCHYG00000023186) #11	LRRN4 (ENSCHYG00000023164) #12	CRLS1 (ENSCHYG00000023059) #13	MCM8 (ENSCHYG00000022938) #15	TRMT6 (ENSCHYG00000022841) #14	CHGB (ENSCHYG00000022801) #16	SHLD1 (ENSCHYG00000022777) #17	GPCPD1 (ENSCHYG00000022402) #18	PROKR2 (ENSCHYG00000022346) #20	ENSCHYG00000022322	CDS2 (ENSCHYG00000022203) #21	PCNA (ENSCHYG00000022154) #22	ENSCHYG00000022115 #23	ENSCHYG00000022061	ENSCHYG00000022022	SLC23A2 (ENSCHYG00000021947) #24	RASSF2 (ENSCHYG00000021830) #25	PRND (ENSCHYG00000021803) #26	PRNP (ENSCHYG00000021768) #27	ZMYND11 (ENSCHYG00000021273) #28	DIP2C (ENSCHYG00000020292) #29	ENSCHYG00000019778	GTPBP4 (ENSCHYG00000019603) #30	IDI1 (ENSCHYG00000019550) #31	WDR37 (ENSCHYG00000019394) #32	ENSCHYG00000019322	ENSCHYG00000019260 #34
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES																	ENSGT00390000004965.u #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00390000004965.u #22
Sperm whale	MODERN SPECIES	752																ENSPCTG00005014956 #22
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.v.a #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000154172.bb	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.v.a #22	ENSGT00390000008694.b.b.c.a #23	ENSGT01000000221962	ENSGT00950000182953.C.c #24	ENSGT00940000154172.bb	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.v.a #22	ENSGT00390000008694.b.b.c.a #23	ENSGT01000000221962	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Odontoceti_b	DUPLICATION
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00940000163859.b.d	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.v.a.a #22	ENSGT00390000008694.b.b.c.a #23	ENSGT01000000221962	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00390000010721.a.a.a.b	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000003721.d.b.g.b.b	ENSGT00390000013178	ENSGT00940000158524
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT01010000230131	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00940000163859.b.d	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.v.a.a #22	ENSGT00390000008694.b.b.c.a #23	ENSGT01000000221962	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00390000010721.a.a.a.b	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000003721.d.b.g.b.b	ENSGT00390000013178	ENSGT00940000158524
Beluga whale	MODERN SPECIES	59	BMP2 (ENSDLEG00000017167) #10	ENSDLEG00000017174	ENSDLEG00000017181	FERMT1 (ENSDLEG00000017195) #11	LRRN4 (ENSDLEG00000017309) #12	CRLS1 (ENSDLEG00000017334) #13	MCM8 (ENSDLEG00000017368) #15	TRMT6 (ENSDLEG00000017414) #14	CHGB (ENSDLEG00000017433) #16	ENSDLEG00000014993	CUNH20orf196 (ENSDLEG00000014998) #17	ENSDLEG00000015004	GPCPD1 (ENSDLEG00000015014) #18	PROKR2 (ENSDLEG00000015034) #20	CDS2 (ENSDLEG00000015054) #21	PCNA (ENSDLEG00000015078) #22	TMEM230 (ENSDLEG00000015085) #23	ENSDLEG00000015094	SLC23A2 (ENSDLEG00000015108) #24	RASSF2 (ENSDLEG00000015151) #25	PRND (ENSDLEG00000015174) #26	PRNP (ENSDLEG00000015179) #27	ENSDLEG00000015191	ENSDLEG00000015197
Narwhal	MODERN SPECIES	299	HAO1 (ENSMMNG00015012769) #7	BMP2 (ENSMMNG00015012759) #10	ENSMMNG00015012747	FERMT1 (ENSMMNG00015012732) #11	LRRN4 (ENSMMNG00015012719) #12	CRLS1 (ENSMMNG00015012694) #13	MCM8 (ENSMMNG00015004174) #15	TRMT6 (ENSMMNG00015004081) #14	CHGB (ENSMMNG00015004061) #16	ENSMMNG00015004052	ENSMMNG00015004043	SHLD1 (ENSMMNG00015004025) #17	GPCPD1 (ENSMMNG00015003969) #18	PROKR2 (ENSMMNG00015003947) #20	CDS2 (ENSMMNG00015003923) #21	ENSMMNG00015003904 #22	ENSMMNG00015003881 #23	ENSMMNG00015003869	SLC23A2 (ENSMMNG00015003843) #24	RASSF2 (ENSMMNG00015003816) #25	PRND (ENSMMNG00015003798) #26	PRNP (ENSMMNG00015003788) #27	ENSMMNG00015003771	ENSMMNG00015003760	ADRA1D (ENSMMNG00015003750)	SMOX (ENSMMNG00015003716)	RNF24 (ENSMMNG00015003655)	PANK2 (ENSMMNG00015003635)	MAVS (ENSMMNG00015003615)	ENSMMNG00015003595	AP5S1 (ENSMMNG00015003583)
Vaquita	MODERN SPECIES	6	HAO1 (ENSPSNG00000006783) #7	BMP2 (ENSPSNG00000006749) #10	ENSPSNG00000006705	FERMT1 (ENSPSNG00000006642) #11	LRRN4 (ENSPSNG00000006606) #12	CRLS1 (ENSPSNG00000006526) #13	MCM8 (ENSPSNG00000006455) #15	TRMT6 (ENSPSNG00000006283) #14	CHGB (ENSPSNG00000006247) #16	ENSPSNG00000006216	ENSPSNG00000006185	SHLD1 (ENSPSNG00000006072) #17	GPCPD1 (ENSPSNG00000005967) #18	PROKR2 (ENSPSNG00000005917) #20	CDS2 (ENSPSNG00000005891) #21	ENSPSNG00000005856 #22	ENSPSNG00000005829 #23	ENSPSNG00000005808	SLC23A2 (ENSPSNG00000005755) #24	RASSF2 (ENSPSNG00000005691) #25	PRND (ENSPSNG00000005670) #26	PRNP (ENSPSNG00000005637) #27	ENSPSNG00000005614	ADRA1D (ENSPSNG00000005599)	SMOX (ENSPSNG00000005562)	PANK2 (ENSPSNG00000005486)	MAVS (ENSPSNG00000005459)	ENSPSNG00000005422	AP5S1 (ENSPSNG00000005394)	CDC25B (ENSPSNG00000005109)	CENPB (ENSPSNG00000004964)
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090	ENSGT01030000234578.A.a	ENSGT00440000039914.k.a	ENSGT00940000154426.b.b	ENSGT00940000158010	ENSGT00950000185288	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547.e	ENSGT00940000158449	ENSGT00390000004965.v.a.b #22	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000162130	ENSGT00940000163699	ENSGT00940000157298	ENSGT00530000064292.f	ENSGT00940000156423	ENSGT00950000183087.B	ENSGT00940000154827	ENSGT00940000160196	ENSGT00950000183003.a.a.a.a.a	ENSGT00390000007818.e.b.b
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT01030000235152	ENSGT00390000003175.a.b	ENSGT00940000162090	ENSGT01030000234578.A.a	ENSGT00440000039914.l	ENSGT00940000154426.b.b	ENSGT00940000158010	ENSGT00940000155816.b	ENSGT00950000185288	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547.e	ENSGT00940000158449	ENSGT00390000004965.v.a.b #22	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00390000012840.t	ENSGT01000000214434.B.b.e.b	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000162130	ENSGT00940000163699	ENSGT00940000157298	ENSGT00530000064292.f	ENSGT00940000156423	ENSGT00950000183087.B	ENSGT00940000154827	ENSGT00940000160196
Narwhal	MODERN SPECIES	307	COPS4 (ENSMMNG00015015091)	LIN54 (ENSMMNG00015015144)	THAP9 (ENSMMNG00015015189)	SEC31A (ENSMMNG00015015379)	SCD5 (ENSMMNG00015015566)	TMEM150C (ENSMMNG00015015593)	ENSMMNG00015015615	HNRNPDL (ENSMMNG00015015647)	HNRNPD (ENSMMNG00015015699)	RASGEF1B (ENSMMNG00015015856)	ENSMMNG00015016036	PRKG2 (ENSMMNG00015016089)	BMP3 (ENSMMNG00015016234)	CFAP299 (ENSMMNG00015016262)	FGF5 (ENSMMNG00015016317)	ENSMMNG00015016337 #22	PRDM8 (ENSMMNG00015016357)	ANTXR2 (ENSMMNG00015016408)	PAQR3 (ENSMMNG00015016509)	BMP2K (ENSMMNG00015016553)	ENSMMNG00015016596	ANXA3 (ENSMMNG00015016624)	FRAS1 (ENSMMNG00015016709)	ENSMMNG00015016965	ENSMMNG00015016978	CNOT6L (ENSMMNG00015017008)	CXCL13 (ENSMMNG00015017029)	ENSMMNG00015017048	CCNG2 (ENSMMNG00015017074)	ENSMMNG00015017139	CCNI (ENSMMNG00015017152)
Vaquita	MODERN SPECIES	16	COPS4 (ENSPSNG00000002984)	LIN54 (ENSPSNG00000002941)	THAP9 (ENSPSNG00000002893)	SEC31A (ENSPSNG00000002644)	SCD5 (ENSPSNG00000002435)	TMEM150C (ENSPSNG00000002402)	ENSPSNG00000002379	HNRNPDL (ENSPSNG00000002324)	HNRNPD (ENSPSNG00000002253)	ENSPSNG00000002219	RASGEF1B (ENSPSNG00000002075)	PRKG2 (ENSPSNG00000001904)	BMP3 (ENSPSNG00000001867)	CFAP299 (ENSPSNG00000001847)	FGF5 (ENSPSNG00000001825)	ENSPSNG00000001811 #22	PRDM8 (ENSPSNG00000001797)	ANTXR2 (ENSPSNG00000001741)	PAQR3 (ENSPSNG00000001664)	BMP2K (ENSPSNG00000001611)	ANXA3 (ENSPSNG00000001556)	ENSPSNG00000001511	ENSPSNG00000001499	FRAS1 (ENSPSNG00000001387)	ENSPSNG00000001294	CNOT6L (ENSPSNG00000001257)	CXCL13 (ENSPSNG00000001231)	CCNG2 (ENSPSNG00000001207)	CCNI (ENSPSNG00000001186)	SEPTIN11 (ENSPSNG00000001151)	SOWAHB (ENSPSNG00000001128)
Dolphin	MODERN SPECIES	4688																PCNA (ENSTTRG00000015368) #22	ENSTTRG00000015369 #23
Sperm whale	MODERN SPECIES	5	TMX4 (ENSPCTG00005009936)	HAO1 (ENSPCTG00005009854) #7	ENSPCTG00005009808	BMP2 (ENSPCTG00005009755) #10	FERMT1 (ENSPCTG00005009690) #11	LRRN4 (ENSPCTG00005009641) #12	CRLS1 (ENSPCTG00005009475) #13	MCM8 (ENSPCTG00005009328) #15	TRMT6 (ENSPCTG00005009158) #14	CHGB (ENSPCTG00005009086) #16	ENSPCTG00005009049	SHLD1 (ENSPCTG00005008992) #17	GPCPD1 (ENSPCTG00005008836) #18	PROKR2 (ENSPCTG00005008803) #20	CDS2 (ENSPCTG00005008734) #21	PCNA (ENSPCTG00005008705) #22	TMEM230 (ENSPCTG00005008681) #23	ENSPCTG00005008662	SLC23A2 (ENSPCTG00005008576) #24	ENSPCTG00005008551	RASSF2 (ENSPCTG00005008514) #25	PRND (ENSPCTG00005008500) #26	PRNP (ENSPCTG00005008490) #27	ADRA1D (ENSPCTG00005008471)	SMOX (ENSPCTG00005008365)	RNF24 (ENSPCTG00005008321)	PANK2 (ENSPCTG00005008276)	AP5S1 (ENSPCTG00005008250)	AP5S1 (ENSPCTG00005008195)	CDC25B (ENSPCTG00005007899)	CENPB (ENSPCTG00005007840)
Blue whale	MODERN SPECIES	6	ENSBMSG00010010881	ENSBMSG00010010872	FERMT1 (ENSBMSG00010010851) #11	LRRN4 (ENSBMSG00010010834) #12	CRLS1 (ENSBMSG00010010790) #13	MCM8 (ENSBMSG00010010750) #15	TRMT6 (ENSBMSG00010010713) #14	CHGB (ENSBMSG00010010695) #16	ENSBMSG00010010672	ENSBMSG00010010661	SHLD1 (ENSBMSG00010010646) #17	GPCPD1 (ENSBMSG00010010627) #18	ENSBMSG00010010616	PROKR2 (ENSBMSG00010010610) #20	CDS2 (ENSBMSG00010010580) #21	ENSBMSG00010010562 #22	ENSBMSG00010010551 #23	SLC23A2 (ENSBMSG00010010536) #24	RASSF2 (ENSBMSG00010010517) #25	PRND (ENSBMSG00010010505) #26	PRNP (ENSBMSG00010010500) #27	ADRA1D (ENSBMSG00010010493)	SMOX (ENSBMSG00010010460)	PANK2 (ENSBMSG00010010416)	MAVS (ENSBMSG00010010404)	ENSBMSG00010010383	AP5S1 (ENSBMSG00010010368)	CDC25B (ENSBMSG00010010198)	CENPB (ENSBMSG00010010098)	SPEF1 (ENSBMSG00010010084)	ADISSP (ENSBMSG00010010057)
Cetacea	ANCESTRAL SPECIES	14	ENSGT00460000041648	ENSGT00940000160730	ENSGT00940000162689	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT00530000063816.d	ENSGT01040000240444.A.b.a.b	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000161528	ENSGT01050000244897.a.a.b	ENSGT00390000011600	ENSGT00390000000076.q.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b	ENSGT00390000016151	ENSGT00390000004965.v.b #22	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398	ENSGT00940000157403	ENSGT00940000162100	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000157773	ENSGT00940000154349	ENSGT00940000159224	ENSGT00390000016508	ENSGT00530000063564.b
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000159035	ENSGT00460000041648	ENSGT00940000160730	ENSGT00940000162689	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT01040000240444.A.b.a.b	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000161528	ENSGT01050000244897.a.a.b	ENSGT00390000011600	ENSGT00390000000076.q.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b	ENSGT00390000016151	ENSGT00390000004965.v.b #22	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398	ENSGT00940000157403	ENSGT00940000162100	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000157773	ENSGT00940000154349	ENSGT00940000159224	ENSGT00390000016508	ENSGT00530000063564.b
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00910000148484	ENSGT00940000159035	ENSGT00460000041648	ENSGT00940000160730	ENSGT00940000162689	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT01040000240444.A.b.a.b	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000161528	ENSGT01050000244897.a.a.b	ENSGT00390000011600	ENSGT00390000000076.q.a	ENSGT00390000016151	ENSGT00390000004965.v.b #22	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398	ENSGT00940000157403	ENSGT00940000162100	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000157773	ENSGT00940000154349	ENSGT00940000159224	ENSGT00390000016508	ENSGT00530000063564.b
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00910000148484	ENSGT00940000159035	ENSGT00460000041648	ENSGT00940000160730	ENSGT00940000162689	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT01040000240444.A.b.a.b	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000161528	ENSGT01050000244897.a.a.b	ENSGT00390000011600	ENSGT00390000000076.q.a	ENSGT00390000016151	ENSGT00390000004965.v.b #22	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398	ENSGT00940000157403	ENSGT00940000162100	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000157773	ENSGT00940000154349	ENSGT00940000159224	ENSGT00390000016508	ENSGT00530000063564.b
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000159035	ENSGT00460000041648	ENSGT00940000160730	ENSGT00940000153241.B	ENSGT00940000156474	ENSGT01040000240444.A.b.a.b	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000161528	ENSGT01050000244897.a.a.b	ENSGT00390000011600	ENSGT00390000000076.q.a	ENSGT00390000016151	ENSGT00390000004965.v.b #22	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398	ENSGT00940000157403	ENSGT00940000162100	ENSGT00940000158597	ENSGT00940000156970	ENSGT00940000157773	ENSGT00940000154349	ENSGT00940000159224	ENSGT00390000016508	ENSGT00530000063564.b
Beluga whale	MODERN SPECIES	84	ENSDLEG00000017363	PPP1R7 (ENSDLEG00000017316)	PASK (ENSDLEG00000017274)	ENSDLEG00000017262	SNED1 (ENSDLEG00000017232)	AGXT (ENSDLEG00000017196)	KIF1A (ENSDLEG00000016909)	GPR35 (ENSDLEG00000016883)	CAPN10 (ENSDLEG00000016855)	RNPEPL1 (ENSDLEG00000016845)	DUSP28 (ENSDLEG00000020125)	GPC1 (ENSDLEG00000020122)	OTOS (ENSDLEG00000020120)	ENSDLEG00000020119	NDUFA10 (ENSDLEG00000020113)	ENSDLEG00000020110 #22	ENSDLEG00000020100	HDAC4 (ENSDLEG00000020087)	TWIST2 (ENSDLEG00000020085)	ASB1 (ENSDLEG00000020081)	TRAF3IP1 (ENSDLEG00000020067)	PER2 (ENSDLEG00000020051)	HES6 (ENSDLEG00000020048)	ENSDLEG00000020045	ILKAP (ENSDLEG00000020033)	KLHL30 (ENSDLEG00000020025)	ESPNL (ENSDLEG00000020020)	SCLY (ENSDLEG00000020011)	ENSDLEG00000019999	ENSDLEG00000019994	RBM44 (ENSDLEG00000019982)
Narwhal	MODERN SPECIES	302	ENSMMNG00015006538	ENSMMNG00015006583	ENSMMNG00015006704	ENSMMNG00015006717	ENSMMNG00015006731	SNED1 (ENSMMNG00015006834)	AGXT (ENSMMNG00015007062)	KIF1A (ENSMMNG00015007221)	GPR35 (ENSMMNG00015007343)	CAPN10 (ENSMMNG00015007389)	DUSP28 (ENSMMNG00015007437)	GPC1 (ENSMMNG00015007470)	OTOS (ENSMMNG00015007505)	ENSMMNG00015007525	NDUFA10 (ENSMMNG00015007576)	ENSMMNG00015007611 #22	HDAC4 (ENSMMNG00015007630)	TWIST2 (ENSMMNG00015007655)	ASB1 (ENSMMNG00015007673)	TRAF3IP1 (ENSMMNG00015007712)	PER2 (ENSMMNG00015007785)	HES6 (ENSMMNG00015007900)	ILKAP (ENSMMNG00015007959)	ERFE (ENSMMNG00015008020)	KLHL30 (ENSMMNG00015008047)	ESPNL (ENSMMNG00015008073)	SCLY (ENSMMNG00015008111)	UBE2F (ENSMMNG00015008200)	ENSMMNG00015008264	RAMP1 (ENSMMNG00015008271)	RBM44 (ENSMMNG00015008291)
Sperm whale	MODERN SPECIES	11	HDLBP (ENSPCTG00005013527)	ENSPCTG00005013491	PPP1R7 (ENSPCTG00005013254)	PASK (ENSPCTG00005013139)	MTERF4 (ENSPCTG00005013081)	SNED1 (ENSPCTG00005012449)	CROCC2 (ENSPCTG00005012155)	AGXT (ENSPCTG00005012044)	KIF1A (ENSPCTG00005011748)	CAPN10 (ENSPCTG00005011556)	GPC1 (ENSPCTG00005011503)	OTOS (ENSPCTG00005011437)	COPS9 (ENSPCTG00005011407)	ENSPCTG00005011361	NDUFA10 (ENSPCTG00005011322)	ENSPCTG00005011310 #22	ENSPCTG00005011293	HDAC4 (ENSPCTG00005011238)	TWIST2 (ENSPCTG00005011216)	ASB1 (ENSPCTG00005011108)	TRAF3IP1 (ENSPCTG00005010957)	PER2 (ENSPCTG00005010248)	HES6 (ENSPCTG00005010074)	ILKAP (ENSPCTG00005009953)	ERFE (ENSPCTG00005009857)	KLHL30 (ENSPCTG00005009750)	ESPNL (ENSPCTG00005009550)	SCLY (ENSPCTG00005009247)	UBE2F (ENSPCTG00005008897)	RAMP1 (ENSPCTG00005008839)	RBM44 (ENSPCTG00005008672)
Blue whale	MODERN SPECIES	18	ENSBMSG00010010004	ENSBMSG00010009987	MTERF4 (ENSBMSG00010009975)	SNED1 (ENSBMSG00010009944)	AGXT (ENSBMSG00010009816)	KIF1A (ENSBMSG00010007348)	ENSBMSG00010006999	GPR35 (ENSBMSG00010006985)	CAPN10 (ENSBMSG00010003227)	RNPEPL1 (ENSBMSG00010003134)	DUSP28 (ENSBMSG00010003124)	GPC1 (ENSBMSG00010003110)	OTOS (ENSBMSG00010003101)	ENSBMSG00010003093	NDUFA10 (ENSBMSG00010003080)	ENSBMSG00010003068 #22	ENSBMSG00010003060	HDAC4 (ENSBMSG00010003049)	TWIST2 (ENSBMSG00010003037)	ASB1 (ENSBMSG00010003016)	TRAF3IP1 (ENSBMSG00010002993)	PER2 (ENSBMSG00010002946)	HES6 (ENSBMSG00010002884)	ILKAP (ENSBMSG00010002845)	ERFE (ENSBMSG00010002824)	KLHL30 (ENSBMSG00010002814)	ESPNL (ENSBMSG00010002806)	SCLY (ENSBMSG00010002795)	UBE2F (ENSBMSG00010002678)	ENSBMSG00010002640	RAMP1 (ENSBMSG00010002628)
Camelidae	ANCESTRAL SPECIES	49	ENSGT00950000182899.A	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Arabian camel	MODERN SPECIES	10	LAMP5 (ENSCDRG00005006870)	PLCB4 (ENSCDRG00005006970)	PLCB1 (ENSCDRG00005007244)	TMX4 (ENSCDRG00005007651)	HAO1 (ENSCDRG00005007697) #7	BMP2 (ENSCDRG00005007763) #10	FERMT1 (ENSCDRG00005007796) #11	CRLS1 (ENSCDRG00005008123) #13	MCM8 (ENSCDRG00005008192) #15	TRMT6 (ENSCDRG00005008494) #14	CHGB (ENSCDRG00005008571) #16	SHLD1 (ENSCDRG00005008616) #17	GPCPD1 (ENSCDRG00005008662) #18	PROKR2 (ENSCDRG00005008753) #20	CDS2 (ENSCDRG00005008787) #21	PCNA (ENSCDRG00005008880) #22	TMEM230 (ENSCDRG00005008904) ##23	SLC23A2 (ENSCDRG00005008943) #24	RASSF2 (ENSCDRG00005009110) #25	PRND (ENSCDRG00005009170) #26	PRNP (ENSCDRG00005009200) #27	ENSCDRG00005009226	ADRA1D (ENSCDRG00005009278)	SMOX (ENSCDRG00005009330)	ENSCDRG00005009570	RNF24 (ENSCDRG00005009600)	PANK2 (ENSCDRG00005009646)	MAVS (ENSCDRG00005009767)	AP5S1 (ENSCDRG00005009863)	CDC25B (ENSCDRG00005009969)	CENPB (ENSCDRG00005010663)
Alpaca	MODERN SPECIES	5401																PCNA (ENSVPAG00000007008) #22	TMEM230 (ENSVPAG00000007009) ##23
Suina	ANCESTRAL SPECIES	9	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27
Pig	DUPLICATION
Pig	MODERN SPECIES	8	TMX4 (ENSSSCG00000021353)	HAO1 (ENSSSCG00000027439) #7	BMP2 (ENSSSCG00000039442) #10	ENSSSCG00000043546	FERMT1 (ENSSSCG00000007052) #11	ENSSSCG00000053721	ENSSSCG00000043762 #12	CRLS1 (ENSSSCG00000040202) #13	MCM8 (ENSSSCG00000007047) #15	TRMT6 (ENSSSCG00000007046) #14	CHGB (ENSSSCG00000039779) #16	SHLD1 (ENSSSCG00000039269) #17	GPCPD1 (ENSSSCG00000007043) #18	PROKR2 (ENSSSCG00000037063) #20	CDS2 (ENSSSCG00000030123) #21	PCNA (ENSSSCG00000056538) #22	ENSSSCG00000028479 ##23	ENSSSCG00000062379	ENSSSCG00000046740	SLC23A2 (ENSSSCG00000026466) #24	RASSF2 (ENSSSCG00000032601) #25	PRND (ENSSSCG00000032923) #26	PRNP (ENSSSCG00000048919) #27	ENSSSCG00000044384	ENSSSCG00000026893	ENSSSCG00000058180	PSD3 (ENSSSCG00000007034)	ENSSSCG00000033750	CSGALNACT1 (ENSSSCG00000035371)	ENSSSCG00000049489	ENSSSCG00000007004
Pig	MODERN SPECIES		ENSSSCG00000041504	ENSSSCG00000046528	CRYBG1 (ENSSSCG00000004371)	PRDM1 (ENSSSCG00000004369)	ATG5 (ENSSSCG00000004370)	PREP (ENSSSCG00000004368)	ENSSSCG00000045756	POPDC3 (ENSSSCG00000004367)	BVES (ENSSSCG00000004366)	LIN28B (ENSSSCG00000037612)	HACE1 (ENSSSCG00000004364)	GRIK2 (ENSSSCG00000004361)	ASCC3 (ENSSSCG00000004358)	SIM1 (ENSSSCG00000004357)	MCHR2 (ENSSSCG00000004356)	ENSSSCG00000031854 #22	ENSSSCG00000004355	PRDM13 (ENSSSCG00000004354)	CCNC (ENSSSCG00000004353)	ENSSSCG00000038757	USP45 (ENSSSCG00000004351)	ENSSSCG00000050732	PNISR (ENSSSCG00000037594)	COQ3 (ENSSSCG00000004349)	FBXL4 (ENSSSCG00000004347)	POU3F2 (ENSSSCG00000056101)	ENSSSCG00000044799	ENSSSCG00000049009	MMS22L (ENSSSCG00000004344)	KLHL32 (ENSSSCG00000027002)	NDUFAF4 (ENSSSCG00000004342)
Chacoan peccary	MODERN SPECIES	811	NFATC3 (ENSCWAG00000008766)	DPEP2NB (ENSCWAG00000008716)	DDX28 (ENSCWAG00000008690)	DUS2 (ENSCWAG00000008545)	FERMT1 (ENSCWAG00000008407) #11	LRRN4 (ENSCWAG00000008334) #12	CRLS1 (ENSCWAG00000008183) #13	MCM8 (ENSCWAG00000007611) #15	TRMT6 (ENSCWAG00000007568) #14	CHGB (ENSCWAG00000007515) #16	SHLD1 (ENSCWAG00000007478) #17	GPCPD1 (ENSCWAG00000007366) #18	ENSCWAG00000007345	PROKR2 (ENSCWAG00000007331) #20	CDS2 (ENSCWAG00000007294) #21	PCNA (ENSCWAG00000007277) #22	TMEM230 (ENSCWAG00000007251) ##23	ENSCWAG00000007234	ENSCWAG00000007216	SLC23A2 (ENSCWAG00000007183) #24	RASSF2 (ENSCWAG00000007167) #25	PRND (ENSCWAG00000007162) #26	PRNP (ENSCWAG00000007148) #27	SYCE1 (ENSCWAG00000006935)	CYP2E1 (ENSCWAG00000006867)	ENSCWAG00000006845	ENSCWAG00000006824	ENSCWAG00000006801	SCART1 (ENSCWAG00000006657)	ENSCWAG00000006644	ENSCWAG00000006554
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Greater horseshoe bat	MODERN SPECIES	15	TMX4 (ENSRFEG00010019567)	HAO1 (ENSRFEG00010019530) #7	ENSRFEG00010019503	BMP2 (ENSRFEG00010019482) #10	FERMT1 (ENSRFEG00010019432) #11	LRRN4 (ENSRFEG00010019407) #12	CRLS1 (ENSRFEG00010019327) #13	MCM8 (ENSRFEG00010019240) #15	TRMT6 (ENSRFEG00010019190) #14	CHGB (ENSRFEG00010019146) #16	SHLD1 (ENSRFEG00010019117) #17	GPCPD1 (ENSRFEG00010019039) #18	ENSRFEG00010018986	PROKR2 (ENSRFEG00010018954) #20	CDS2 (ENSRFEG00010018910) #21	PCNA (ENSRFEG00010018873) #22	ENSRFEG00010018849 ##23	SLC23A2 (ENSRFEG00010018800) #24	RASSF2 (ENSRFEG00010018760) #25	ENSRFEG00010018730	PRND (ENSRFEG00010018719) #26	PRNP (ENSRFEG00010018706) #27	ADRA1D (ENSRFEG00010018678)	SMOX (ENSRFEG00010018585)	RNF24 (ENSRFEG00010018555)	PANK2 (ENSRFEG00010018454)	MAVS (ENSRFEG00010018430)	AP5S1 (ENSRFEG00010018384)	CDC25B (ENSRFEG00010017967)	CENPB (ENSRFEG00010017919)	SPEF1 (ENSRFEG00010017839)
Microbat	MODERN SPECIES	1115					ENSMLUG00000007868 #11	LRRN4 (ENSMLUG00000007835) #12	CRLS1 (ENSMLUG00000007806) #13	MCM8 (ENSMLUG00000006501) #15	TRMT6 (ENSMLUG00000006491) #14	CHGB (ENSMLUG00000027990) #16	SHLD1 (ENSMLUG00000007034) #17	GPCPD1 (ENSMLUG00000003324) #18	ENSMLUG00000023215	PROKR2 (ENSMLUG00000007734) #20	CDS2 (ENSMLUG00000001698) #21	PCNA (ENSMLUG00000001693) #22	ENSMLUG00000023089 ##23	ENSMLUG00000026217	SLC23A2 (ENSMLUG00000010540) #24	RASSF2 (ENSMLUG00000010517) #25	PRND (ENSMLUG00000012214) #26	ADRA1D (ENSMLUG00000024223)	SMOX (ENSMLUG00000015515)	RNF24 (ENSMLUG00000008272)	PANK2 (ENSMLUG00000008258)	MAVS (ENSMLUG00000008223)	AP5S1 (ENSMLUG00000008216)	CDC25B (ENSMLUG00000008182)	ENSMLUG00000024266	SPEF1 (ENSMLUG00000008165)	ADISSP (ENSMLUG00000008147)
Megabat	MODERN SPECIES	3546															CDS2 (ENSPVAG00000002866) #21	PCNA (ENSPVAG00000002865) #22	ENSPVAG00000002863 #23
Equus	ANCESTRAL SPECIES	8	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT01090000263289	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT00390000008327 #14	ENSGT01090000260080.a #15	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Horse	MODERN SPECIES	14	TMX4 (ENSECAG00000007522)	HAO1 (ENSECAG00000047825) #7	ENSECAG00000051234	BMP2 (ENSECAG00000021201) #10	ENSECAG00000044201	FERMT1 (ENSECAG00000000136) #11	LRRN4 (ENSECAG00000020607) #12	CRLS1 (ENSECAG00000023869) #13	MCM8 (ENSECAG00000015452) #15	TRMT6 (ENSECAG00000023914) #14	CHGB (ENSECAG00000015702) #16	SHLD1 (ENSECAG00000055447) #17	GPCPD1 (ENSECAG00000023076) #18	PROKR2 (ENSECAG00000032055) #20	CDS2 (ENSECAG00000012485) #21	PCNA (ENSECAG00000013162) #22	TMEM230 (ENSECAG00000013222) ##23	SLC23A2 (ENSECAG00000014874) #24	RASSF2 (ENSECAG00000023596) #25	PRND (ENSECAG00000004704) #26	PRNP (ENSECAG00000029062) #27	ADRA1D (ENSECAG00000005173)	SMOX (ENSECAG00000005905)	PANK2 (ENSECAG00000017511)	RNF24 (ENSECAG00000017482)	MAVS (ENSECAG00000024618)	AP5S1 (ENSECAG00000025082)	CENPB (ENSECAG00000055879)	CDC25B (ENSECAG00000025092)	SPEF1 (ENSECAG00000017979)	ADISSP (ENSECAG00000021455)
Donkey	MODERN SPECIES	6	PLCB1 (ENSEASG00005001637)	TMX4 (ENSEASG00005037822)	HAO1 (ENSEASG00005001611) #7	BMP2 (ENSEASG00005025974) #10	ENSEASG00005001605	FERMT1 (ENSEASG00005001595) #11	LRRN4 (ENSEASG00005031814) #12	ENSEASG00005001572 #13	ENSEASG00005001389 #15	ENSEASG00005001411 #14	ENSEASG00005001378 #16	ENSEASG00005023847	GPCPD1 (ENSEASG00005001356) #18	PROKR2 (ENSEASG00005032594) #20	CDS2 (ENSEASG00005001329) #21	PCNA (ENSEASG00005001320) #22	ENSEASG00005024441 ##23	SLC23A2 (ENSEASG00005001309) #24	RASSF2 (ENSEASG00005001301) #25	PRND (ENSEASG00005001277) #26	prnp (ENSEASG00005027312) #27	ENSEASG00005001262	ADRA1D (ENSEASG00005001254)	SMOX (ENSEASG00005001238)	RNF24 (ENSEASG00005025708)	PANK2 (ENSEASG00005001193)	MAVS (ENSEASG00005001188)	AP5S1 (ENSEASG00005032288)	CDC25B (ENSEASG00005001177)	CENPB (ENSEASG00005001170)	SPEF1 (ENSEASG00005001146)
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Caniformia	ANCESTRAL SPECIES		ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Canidae	ANCESTRAL SPECIES	19	ENSGT00940000155428.f	ENSGT00940000160301	ENSGT00950000186311	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00950000186311	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00390000014165.c.a.a.h.f.b.a	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00390000012178.g.b.b	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Dog	MODERN SPECIES	16	TMX4 (ENSCAFG00845026769)	ENSCAFG00845026888	HAO1 (ENSCAFG00845026925) #7	BMP2 (ENSCAFG00845027004) #10	FERMT1 (ENSCAFG00845027072) #11	ENSCAFG00845027161 #12	MCM8 (ENSCAFG00845027289) #15	TRMT6 (ENSCAFG00845027607) #14	ENSCAFG00845027656	CHGB (ENSCAFG00845027687) #16	SHLD1 (ENSCAFG00845027765) #17	ENSCAFG00845027885	GPCPD1 (ENSCAFG00845027927) #18	PROKR2 (ENSCAFG00845028125) #20	CDS2 (ENSCAFG00845028177) #21	PCNA (ENSCAFG00845028229) #22	TMEM230 (ENSCAFG00845028266) #23	SLC23A2 (ENSCAFG00845028487) #24	RASSF2 (ENSCAFG00845028911) #25	PRND (ENSCAFG00845029075) #26	PRNP (ENSCAFG00845013725) #27	ADRA1D (ENSCAFG00845013754)	SMOX (ENSCAFG00845013771)	RNF24 (ENSCAFG00845013808)	ENSCAFG00845013820	PANK2 (ENSCAFG00845013830)	MAVS (ENSCAFG00845013869)	AP5S1 (ENSCAFG00845013889)	CDC25B (ENSCAFG00845014023)	CENPB (ENSCAFG00845014180)	SPEF1 (ENSCAFG00845014188)
Dingo	MODERN SPECIES	343	TMX4 (ENSCAFG00020000183)	ENSCAFG00020000262	HAO1 (ENSCAFG00020000270) #7	BMP2 (ENSCAFG00020000368) #10	FERMT1 (ENSCAFG00020000398) #11	CRLS1 (ENSCAFG00020000734) #13	MCM8 (ENSCAFG00020000771) #15	TRMT6 (ENSCAFG00020000777) #14	ENSCAFG00020000781	CHGB (ENSCAFG00020000789) #16	SHLD1 (ENSCAFG00020000822) #17	ENSCAFG00020000827	GPCPD1 (ENSCAFG00020000839) #18	PROKR2 (ENSCAFG00020000846) #20	CDS2 (ENSCAFG00020000922) #21	PCNA (ENSCAFG00020001289) #22	ENSCAFG00020001296 #23	SLC23A2 (ENSCAFG00020001322) #24	RASSF2 (ENSCAFG00020001561) #25	PRND (ENSCAFG00020001574) #26	PRNP (ENSCAFG00020001602) #27	ADRA1D (ENSCAFG00020001611)	SMOX (ENSCAFG00020001635)	ENSCAFG00020001682	RNF24 (ENSCAFG00020001686)	PANK2 (ENSCAFG00020001695)	MAVS (ENSCAFG00020001723)	AP5S1 (ENSCAFG00020001733)	CDC25B (ENSCAFG00020001737)	CENPB (ENSCAFG00020001743)	SPEF1 (ENSCAFG00020001753)
Red fox	MODERN SPECIES	91	ENSVVUG00000023323	TMX4 (ENSVVUG00000023329)	ENSVVUG00000023333	HAO1 (ENSVVUG00000023334) #7	BMP2 (ENSVVUG00000023342) #10	FERMT1 (ENSVVUG00000023350) #11	CRLS1 (ENSVVUG00000023356) #13	MCM8 (ENSVVUG00000023361) #15	TRMT6 (ENSVVUG00000023370) #14	CHGB (ENSVVUG00000023373) #16	SHLD1 (ENSVVUG00000023376) #17	ENSVVUG00000023378	GPCPD1 (ENSVVUG00000023384) #18	PROKR2 (ENSVVUG00000023412) #20	CDS2 (ENSVVUG00000023464) #21	PCNA (ENSVVUG00000024366) #22	TMEM230 (ENSVVUG00000024369) ##23	SLC23A2 (ENSVVUG00000024374) #24	RASSF2 (ENSVVUG00000024382) #25	ENSVVUG00000024388	PRND (ENSVVUG00000024392) #26	PRNP (ENSVVUG00000024404) #27	SMOX (ENSVVUG00000024419)	ADRA1D (ENSVVUG00000024423)	RNF24 (ENSVVUG00000024431)	PANK2 (ENSVVUG00000024434)	MAVS (ENSVVUG00000024440)	AP5S1 (ENSVVUG00000024445)	CDC25B (ENSVVUG00000024457)	CENPB (ENSVVUG00000024526)	SPEF1 (ENSVVUG00000024527)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969.d #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Ursidae	ANCESTRAL SPECIES	14	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969.d #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Ursus	ANCESTRAL SPECIES	1	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a.c #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969.d #17	ENSGT00390000004690.a.a.v	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Polar bear	MODERN SPECIES	253	ENSUMAG00000007584	PLCB4 (ENSUMAG00000006223)	PLCB1 (ENSUMAG00000005289)	TMX4 (ENSUMAG00000005236)	HAO1 (ENSUMAG00000005210) #7	BMP2 (ENSUMAG00000005204) #10	FERMT1 (ENSUMAG00000005159) #11	CRLS1 (ENSUMAG00000005152) #13	MCM8 (ENSUMAG00000005023) #15	TRMT6 (ENSUMAG00000004999) #14	CHGB (ENSUMAG00000004987) #16	ENSUMAG00000004977	GPCPD1 (ENSUMAG00000004967) #18	PROKR2 (ENSUMAG00000004964) #20	CDS2 (ENSUMAG00000004718) #21	PCNA (ENSUMAG00000004683) #22	ENSUMAG00000004679 #23	SLC23A2 (ENSUMAG00000004337) #24	RASSF2 (ENSUMAG00000004284) #25	PRND (ENSUMAG00000004273) #26	ENSUMAG00000004270	SMOX (ENSUMAG00000004266)	RNF24 (ENSUMAG00000004257)	PANK2 (ENSUMAG00000004244)	ENSUMAG00000004237	AP5S1 (ENSUMAG00000004231)	SPEF1 (ENSUMAG00000004178)	ADISSP (ENSUMAG00000004169)	HSPA12B (ENSUMAG00000004151)	ENSUMAG00000004145	SIGLEC1 (ENSUMAG00000003800)
American black bear	MODERN SPECIES	6581																PCNA (ENSUAMG00000012278) #22	ENSUAMG00000012274 ##23
Giant Panda	MODERN SPECIES	4	LAMP5 (ENSAMEG00000027299)	PLCB4 (ENSAMEG00000002450)	PLCB1 (ENSAMEG00000002350)	TMX4 (ENSAMEG00000016019)	HAO1 (ENSAMEG00000016027) #7	BMP2 (ENSAMEG00000010543) #10	FERMT1 (ENSAMEG00000010546) #11	LRRN4 (ENSAMEG00000010592) #12	MCM8 (ENSAMEG00000010605) #15	TRMT6 (ENSAMEG00000010635) #14	CHGB (ENSAMEG00000010188) #16	ENSAMEG00000026323 #17	GPCPD1 (ENSAMEG00000014492) #18	PROKR2 (ENSAMEG00000025211) #20	CDS2 (ENSAMEG00000009113) #21	PCNA (ENSAMEG00000009089) #22	ENSAMEG00000009083 #23	SLC23A2 (ENSAMEG00000009048) #24	RASSF2 (ENSAMEG00000009018) #25	PRND (ENSAMEG00000019875) #26	PRNP (ENSAMEG00000025533) #27	ADRA1D (ENSAMEG00000019871)	ENSAMEG00000004354	RNF24 (ENSAMEG00000010675)	PANK2 (ENSAMEG00000010681)	ENSAMEG00000010704	AP5S1 (ENSAMEG00000010717)	CDC25B (ENSAMEG00000010721)	ENSAMEG00000010785	SPEF1 (ENSAMEG00000030358)	ADISSP (ENSAMEG00000010797)
Mustelinae	ANCESTRAL SPECIES	43	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969.d #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Ferret	MODERN SPECIES	192	TMX4 (ENSMPUG00000006408)	HAO1 (ENSMPUG00000006402) #7	ENSMPUG00000006391	ENSMPUG00000006384	BMP2 (ENSMPUG00000006377) #10	ENSMPUG00000006373	FERMT1 (ENSMPUG00000006364) #11	LRRN4 (ENSMPUG00000006354) #12	ENSMPUG00000006349 #13	MCM8 (ENSMPUG00000006332) #15	TRMT6 (ENSMPUG00000006317) #14	CHGB (ENSMPUG00000006312) #16	GPCPD1 (ENSMPUG00000006221) #18	PROKR2 (ENSMPUG00000006216) #20	CDS2 (ENSMPUG00000006203) #21	PCNA (ENSMPUG00000006195) #22
American mink	MODERN SPECIES	28	PLCB1 (ENSNVIG00000018320)	TMX4 (ENSNVIG00000018532)	HAO1 (ENSNVIG00000018550) #7	BMP2 (ENSNVIG00000018558) #10	FERMT1 (ENSNVIG00000018576) #11	LRRN4 (ENSNVIG00000018602) #12	CRLS1 (ENSNVIG00000018610) #13	MCM8 (ENSNVIG00000018649) #15	TRM6 (ENSNVIG00000018778) #14	CHGB (ENSNVIG00000018787) #16	CT196 (ENSNVIG00000018795) #17	ENSNVIG00000018800	GPCPD1 (ENSNVIG00000018810) #18	PROKR2 (ENSNVIG00000018835) #20	CDS2 (ENSNVIG00000018853) #21	PCNA (ENSNVIG00000018875) #22	ENSNVIG00000018902 ##23	S23A2 (ENSNVIG00000018953) #24	RASSF2 (ENSNVIG00000019016) #25	PRND (ENSNVIG00000019032) #26	PRNP (ENSNVIG00000019036) #27	ADRA1D (ENSNVIG00000019056)	SMOX (ENSNVIG00000019077)	RNF24 (ENSNVIG00000019128)	ENSNVIG00000019149	ENSNVIG00000019156	MAVS (ENSNVIG00000019163)	AP5S1 (ENSNVIG00000019178)	CDC25B (ENSNVIG00000019210)	CENPB (ENSNVIG00000019335)	SPEF1 (ENSNVIG00000019341)
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000153525.g.b.b	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000153525.g.b.b	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Tiger	MODERN SPECIES	16							FERMT1 (ENSPTIG00000020307) #11	CRLS1 (ENSPTIG00000020100) #13	MCM8 (ENSPTIG00000011577) #15	TRMT6 (ENSPTIG00000010629) #14	CHGB (ENSPTIG00000010344) #16	SHLD1 (ENSPTIG00000009460) #17	GPCPD1 (ENSPTIG00000008755) #18	PROKR2 (ENSPTIG00000008422) #20	CDS2 (ENSPTIG00000007064) #21	PCNA (ENSPTIG00000006471) #22	ENSPTIG00000004806 #23	SLC23A2 (ENSPTIG00000021363) #24	RASSF2 (ENSPTIG00000019677) #25	PRND (ENSPTIG00000003054) #26	PRNP (ENSPTIG00000003015) #27	ADRA1D (ENSPTIG00000018450)	SMOX (ENSPTIG00000013336)	RNF24 (ENSPTIG00000012903)	PANK2 (ENSPTIG00000011189)	MAVS (ENSPTIG00000010949)	AP5S1 (ENSPTIG00000010363)	CDC25B (ENSPTIG00000006344)	CENPB (ENSPTIG00000002454)	SPEF1 (ENSPTIG00000005020)	ADISSP (ENSPTIG00000003163)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000153525.g.b.b	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
leopard	MODERN SPECIES	39	PLCB4 (ENSPPRG00000002992)	PLCB1 (ENSPPRG00000013709)	TMX4 (ENSPPRG00000006913)	HAO1 (ENSPPRG00000006455) #7	BMP2 (ENSPPRG00000005849) #10	FERMT1 (ENSPPRG00000005741) #11	LRRN4 (ENSPPRG00000005047) #12	CRLS1 (ENSPPRG00000004763) #13	MCM8 (ENSPPRG00000004200) #15	TRMT6 (ENSPPRG00000000424) #14	CHGB (ENSPPRG00000000192) #16	SHLD1 (ENSPPRG00000021259) #17	GPCPD1 (ENSPPRG00000020543) #18	PROKR2 (ENSPPRG00000019919) #20	CDS2 (ENSPPRG00000019698) #21	PCNA (ENSPPRG00000018491) #22	ENSPPRG00000017464 #23	ENSPPRG00000018007 ##23	SLC23A2 (ENSPPRG00000015293) #24	RASSF2 (ENSPPRG00000014749) #25	PRND (ENSPPRG00000017966) #26	PRNP (ENSPPRG00000017953) #27	ENSPPRG00000012941	ENSPPRG00000011910	ADRA1D (ENSPPRG00000011828)	SMOX (ENSPPRG00000011538)	RNF24 (ENSPPRG00000010243)	PANK2 (ENSPPRG00000009982)	MAVS (ENSPPRG00000009408)	AP5S1 (ENSPPRG00000009268)	CDC25B (ENSPPRG00000008321)
lion	MODERN SPECIES	3	PLCB4 (ENSPLOG00000000265)	PLCB1 (ENSPLOG00000000407)	TMX4 (ENSPLOG00000000605)	HAO1 (ENSPLOG00000000623) #7	BMP2 (ENSPLOG00000000644) #10	FERMT1 (ENSPLOG00000000673) #11	LRRN4 (ENSPLOG00000000712) #12	CRLS1 (ENSPLOG00000000747) #13	MCM8 (ENSPLOG00000000805) #15	TRMT6 (ENSPLOG00000000851) #14	CHGB (ENSPLOG00000000880) #16	SHLD1 (ENSPLOG00000000905) #17	GPCPD1 (ENSPLOG00000000931) #18	PROKR2 (ENSPLOG00000000967) #20	CDS2 (ENSPLOG00000000983) #21	PCNA (ENSPLOG00000001088) #22	ENSPLOG00000001113 ##23	SLC23A2 (ENSPLOG00000001143) #24	ENSPLOG00000001157	RASSF2 (ENSPLOG00000001181) #25	PRND (ENSPLOG00000001217) #26	PRNP (ENSPLOG00000001229) #27	ENSPLOG00000001238	ADRA1D (ENSPLOG00000001254)	SMOX (ENSPLOG00000001303)	RNF24 (ENSPLOG00000001349)	PANK2 (ENSPLOG00000001364)	MAVS (ENSPLOG00000001398)	AP5S1 (ENSPLOG00000001418)	CDC25B (ENSPLOG00000001506)	CENPB (ENSPLOG00000001702)
Cat	MODERN SPECIES	2	PLCB1 (ENSFCAG00000014951)	TMX4 (ENSFCAG00000040472)	HAO1 (ENSFCAG00000009832) #7	BMP2 (ENSFCAG00000037659) #10	ENSFCAG00000029904	FERMT1 (ENSFCAG00000019220) #11	LRRN4 (ENSFCAG00000001198) #12	CRLS1 (ENSFCAG00000023647) #13	MCM8 (ENSFCAG00000011524) #15	TRMT6 (ENSFCAG00000003102) #14	CHGB (ENSFCAG00000000220) #16	GPCPD1 (ENSFCAG00000018300) #18	PROKR2 (ENSFCAG00000035343) #20	ENSFCAG00000024563	CDS2 (ENSFCAG00000031257) #21	PCNA (ENSFCAG00000009068) #22	ENSFCAG00000036587 #23	SLC23A2 (ENSFCAG00000024001) #24	ENSFCAG00000053205	RASSF2 (ENSFCAG00000028725) #25	PRND (ENSFCAG00000001473) #26	PRNP (ENSFCAG00000031270) #27	ENSFCAG00000044886	ENSFCAG00000028982	ADRA1D (ENSFCAG00000029041)	SMOX (ENSFCAG00000003244)	RNF24 (ENSFCAG00000044276)	PANK2 (ENSFCAG00000007477)	MAVS (ENSFCAG00000022983)	AP5S1 (ENSFCAG00000034536)	CDC25B (ENSFCAG00000019152)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000004965 #22
Hedgehog	MODERN SPECIES	2939																PCNA (ENSEEUG00000003069) #22
Common shrew	MODERN SPECIES	2182																ENSSARG00000004070 #22
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Glires	ANCESTRAL SPECIES	17	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00390000008694.b.b.c.a #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Chinese hamster chok1gshd	MODERN SPECIES	188	ENSCGRG00001013943	Plcb1 (ENSCGRG00001022157)	Tmx4 (ENSCGRG00001011118)	Hao1 (ENSCGRG00001015847) #7	Bmp2 (ENSCGRG00001002778) #10	Fermt1 (ENSCGRG00001024625) #11	Lrrn4 (ENSCGRG00001010318) #12	Crls1 (ENSCGRG00001004506) #13	Mcm8 (ENSCGRG00001019340) #15	Trmt6 (ENSCGRG00001003385) #14	Chgb (ENSCGRG00001007192) #16	Shld1 (ENSCGRG00001010212) #17	Gpcpd1 (ENSCGRG00001013719) #18	Prokr2 (ENSCGRG00001021242) #20	Cds2 (ENSCGRG00001021649) #21	PCNA (ENSCGRG00001024400) #22	ENSCGRG00001010358 ##23	Slc23a2 (ENSCGRG00001014211) #24	Rassf2 (ENSCGRG00001024564) #25	Prnd (ENSCGRG00001009363) #26	PRNP (ENSCGRG00001009683) #27	Erv3 (ENSCGRG00001011041)	Adra1d (ENSCGRG00001023844)	Smox (ENSCGRG00001021378)	Rnf24 (ENSCGRG00001024779)	Pank2 (ENSCGRG00001020982)	Mavs (ENSCGRG00001023482)	Ap5s1 (ENSCGRG00001024767)	CDC25B (ENSCGRG00001017028)	Cenpb (ENSCGRG00001019077)	Spef1 (ENSCGRG00001021469)
Golden Hamster	MODERN SPECIES	631	Plcb1 (ENSMAUG00000015228)	Tmx4 (ENSMAUG00000019706)	Hao1 (ENSMAUG00000015886) #7	Bmp2 (ENSMAUG00000015083) #10	Fermt1 (ENSMAUG00000010640) #11	Lrrn4 (ENSMAUG00000020854) #12	Mcm8 (ENSMAUG00000016474) #15	Crls1 (ENSMAUG00000008909) #13	Trmt6 (ENSMAUG00000008719) #14	Chgb (ENSMAUG00000015126) #16	Shld1 (ENSMAUG00000020234) #17	ENSMAUG00000019489	Gpcpd1 (ENSMAUG00000015693) #18	Prokr2 (ENSMAUG00000015191) #20	Cds2 (ENSMAUG00000011457) #21	Pcna (ENSMAUG00000010813) #22	Tmem230 (ENSMAUG00000009761) #23	Slc23a2 (ENSMAUG00000008639) #24	Rassf2 (ENSMAUG00000006458) #25	Prnd (ENSMAUG00000020658) #26	Prnp (ENSMAUG00000020251) #27	Adra1d (ENSMAUG00000009086)	Smox (ENSMAUG00000011252)	Rnf24 (ENSMAUG00000007938)	Mavs (ENSMAUG00000014641)	ENSMAUG00000010156	Cdc25b (ENSMAUG00000013356)	Cenpb (ENSMAUG00000009494)	Spef1 (ENSMAUG00000020367)	ENSMAUG00000006345	Hspa12b (ENSMAUG00000015233)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Prairie vole	MODERN SPECIES	86	Plcb4 (ENSMOCG00000001591)	Plcb1 (ENSMOCG00000002047)	ENSMOCG00000021335	Hao1 (ENSMOCG00000001475) #7	Bmp2 (ENSMOCG00000005962) #10	Fermt1 (ENSMOCG00000018139) #11	Lrrn4 (ENSMOCG00000011080) #12	Crls1 (ENSMOCG00000006111) #13	Mcm8 (ENSMOCG00000015893) #15	Trmt6 (ENSMOCG00000022320) #14	Chgb (ENSMOCG00000001424) #16	Shld1 (ENSMOCG00000005816) #17	Gpcpd1 (ENSMOCG00000013354) #18	Prokr2 (ENSMOCG00000012413) #20	Cds2 (ENSMOCG00000015701) #21	Pcna (ENSMOCG00000019613) #22	Tmem230 (ENSMOCG00000019540) ##23	Slc23a2 (ENSMOCG00000021732) #24	Rassf2 (ENSMOCG00000000426) #25	Prnd (ENSMOCG00000022573) #26	Prnp (ENSMOCG00000003173) #27	ENSMOCG00000021022	Adra1d (ENSMOCG00000006284)	Smox (ENSMOCG00000011648)	Rnf24 (ENSMOCG00000008073)	Pank2 (ENSMOCG00000015823)	Mavs (ENSMOCG00000022480)	Ap5s1 (ENSMOCG00000007406)	Cdc25b (ENSMOCG00000000383)	Cenpb (ENSMOCG00000006748)	Spef1 (ENSMOCG00000016870)
Northern American deer mouse	MODERN SPECIES	17	Plcb1 (ENSPEMG00000023485)	Tmx4 (ENSPEMG00000013286)	Hao1 (ENSPEMG00000023039) #7	Bmp2 (ENSPEMG00000030188) #10	Fermt1 (ENSPEMG00000021814) #11	Lrrn4 (ENSPEMG00000022463) #12	Crls1 (ENSPEMG00000022545) #13	Mcm8 (ENSPEMG00000021929) #15	Trmt6 (ENSPEMG00000023268) #14	Chgb (ENSPEMG00000021563) #16	Shld1 (ENSPEMG00000026957) #17	Gpcpd1 (ENSPEMG00000023089) #18	ENSPEMG00000029643 #20	ENSPEMG00000030370	Cds2 (ENSPEMG00000028822) #21	Pcna (ENSPEMG00000011751) #22	Tmem230 (ENSPEMG00000026972) ##23	Slc23a2 (ENSPEMG00000024117) #24	Rassf2 (ENSPEMG00000030284) #25	Prnd (ENSPEMG00000025579) #26	Prnp (ENSPEMG00000028335) #27	Erv3 (ENSPEMG00000022580)	Adra1d (ENSPEMG00000024149)	Smox (ENSPEMG00000009534)	Rnf24 (ENSPEMG00000014355)	Pank2 (ENSPEMG00000005506)	Mavs (ENSPEMG00000011582)	Ap5s1 (ENSPEMG00000016394)	Cdc25b (ENSPEMG00000012973)	Cenpb (ENSPEMG00000005445)	Spef1 (ENSPEMG00000002306)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Mus	ANCESTRAL SPECIES	1	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Mus_A	ANCESTRAL SPECIES		ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Mus_C	ANCESTRAL SPECIES		ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00520000061380	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
spretus	MODERN SPECIES	11	Plcb4 (MGP_SPRETEiJ_G0025273)	Plcb1 (MGP_SPRETEiJ_G0025272)	Tmx4 (MGP_SPRETEiJ_G0025271)	Hao1 (MGP_SPRETEiJ_G0025270) #7	Bmp2 (MGP_SPRETEiJ_G0025269) #10	Fermt1 (MGP_SPRETEiJ_G0025268) #11	Lrrn4 (MGP_SPRETEiJ_G0025267) #12	Crls1 (MGP_SPRETEiJ_G0025266) #13	Mcm8 (MGP_SPRETEiJ_G0025265) #15	Trmt6 (MGP_SPRETEiJ_G0025264) #14	Chgb (MGP_SPRETEiJ_G0025263) #16	Shld1 (MGP_SPRETEiJ_G0025262) #17	Gpcpd1 (MGP_SPRETEiJ_G0025261) #18	Prokr2 (MGP_SPRETEiJ_G0025260) #20	Cds2 (MGP_SPRETEiJ_G0025259) #21	Pcna (MGP_SPRETEiJ_G0025258) #22	Tmem230 (MGP_SPRETEiJ_G0025257) ##23	Slc23a2 (MGP_SPRETEiJ_G0025256) #24	Rassf2 (MGP_SPRETEiJ_G0025255) #25	MGP_SPRETEiJ_G0025254 #26	MGP_SPRETEiJ_G0025253 #26	Prnp (MGP_SPRETEiJ_G0025252) #27	Erv3 (MGP_SPRETEiJ_G0025251)	Adra1d (MGP_SPRETEiJ_G0025250)	Smox (MGP_SPRETEiJ_G0025249)	Rnf24 (MGP_SPRETEiJ_G0025248)	Pank2 (MGP_SPRETEiJ_G0025247)	Mavs (MGP_SPRETEiJ_G0025246)	Ap5s1 (MGP_SPRETEiJ_G0025245)	Cdc25b (MGP_SPRETEiJ_G0025244)	Cenpb (MGP_SPRETEiJ_G0025243)
Steppe mouse	MODERN SPECIES	2941						Fermt1 (ENSMSIG00000020784) #11	Lrrn4 (ENSMSIG00000020771) #12	Crls1 (ENSMSIG00000020726) #13	Mcm8 (ENSMSIG00000020630) #15	Trmt6 (ENSMSIG00000020606) #14	Chgb (ENSMSIG00000020572) #16	ENSMSIG00000020536 #17	Gpcpd1 (ENSMSIG00000020506) #18	Prokr2 (ENSMSIG00000020484) #20	Cds2 (ENSMSIG00000020417) #21	Pcna (ENSMSIG00000020409) #22	ENSMSIG00000020375 ##23	Slc23a2 (ENSMSIG00000020301) #24	ENSMSIG00000020279 #25	Prnd (ENSMSIG00000020269) #26	Prnp (ENSMSIG00000020265) #27	Erv3 (ENSMSIG00000020259)	Adra1d (ENSMSIG00000020251)	Smox (ENSMSIG00000020179)
Mouse	MODERN SPECIES	11	Plcb4 (ENSMUSG00000039943)	Plcb1 (ENSMUSG00000051177)	Tmx4 (ENSMUSG00000034723)	Hao1 (ENSMUSG00000027261) #7	Bmp2 (ENSMUSG00000027358) #10	Fermt1 (ENSMUSG00000027356) #11	Lrrn4 (ENSMUSG00000043110) #12	Crls1 (ENSMUSG00000027357) #13	Mcm8 (ENSMUSG00000027353) #15	Trmt6 (ENSMUSG00000037376) #14	Chgb (ENSMUSG00000027350) #16	Shld1 (ENSMUSG00000044991) #17	Gpcpd1 (ENSMUSG00000027346) #18	Prokr2 (ENSMUSG00000050558) #20	Cds2 (ENSMUSG00000058793) #21	Pcna (ENSMUSG00000027342) #22	Tmem230 (ENSMUSG00000027341) ##23	Slc23a2 (ENSMUSG00000027340) #24	Rassf2 (ENSMUSG00000027339) #25	Prnd (ENSMUSG00000027338) #26	Prn (ENSMUSG00000098754)	Prnp (ENSMUSG00000079037) #27	Erv3 (ENSMUSG00000037482)	Adra1d (ENSMUSG00000027335)	Smox (ENSMUSG00000027333)	Rnf24 (ENSMUSG00000048911)	Pank2 (ENSMUSG00000037514)	Mavs (ENSMUSG00000037523)	Ap5s1 (ENSMUSG00000068264)	Cdc25b (ENSMUSG00000027330)	Cenpb (ENSMUSG00000068267)
Ryukyu mouse	MODERN SPECIES	11	Plcb4 (MGP_CAROLIEiJ_G0024353)	Plcb1 (MGP_CAROLIEiJ_G0024352)	Tmx4 (MGP_CAROLIEiJ_G0024351)	Hao1 (MGP_CAROLIEiJ_G0024350) #7	Bmp2 (MGP_CAROLIEiJ_G0024349) #10	Fermt1 (MGP_CAROLIEiJ_G0024348) #11	Lrrn4 (MGP_CAROLIEiJ_G0024347) #12	Crls1 (MGP_CAROLIEiJ_G0024346) #13	Mcm8 (MGP_CAROLIEiJ_G0024345) #15	Trmt6 (MGP_CAROLIEiJ_G0024344) #14	Chgb (MGP_CAROLIEiJ_G0024343) #16	Shld1 (MGP_CAROLIEiJ_G0024342) #17	MGP_CAROLIEiJ_G0024341 #18	Prokr2 (MGP_CAROLIEiJ_G0024340) #20	Cds2 (MGP_CAROLIEiJ_G0024339) #21	Pcna (MGP_CAROLIEiJ_G0024338) #22	Tmem230 (MGP_CAROLIEiJ_G0024337) ##23	Slc23a2 (MGP_CAROLIEiJ_G0024336) #24	Rassf2 (MGP_CAROLIEiJ_G0024335) #25	MGP_CAROLIEiJ_G0024334 #26	MGP_CAROLIEiJ_G0024333 #26	Prnp (MGP_CAROLIEiJ_G0024332) #27	Erv3 (MGP_CAROLIEiJ_G0024331)	Adra1d (MGP_CAROLIEiJ_G0024330)	Smox (MGP_CAROLIEiJ_G0024329)	Rnf24 (MGP_CAROLIEiJ_G0024328)	Pank2 (MGP_CAROLIEiJ_G0024327)	MGP_CAROLIEiJ_G0024326	MGP_CAROLIEiJ_G0024325	Cdc25b (MGP_CAROLIEiJ_G0024324)	Cenpb (MGP_CAROLIEiJ_G0024323)
Shrew mouse	MODERN SPECIES	16	Plcb4 (MGP_PahariEiJ_G0025798)	Plcb1 (MGP_PahariEiJ_G0025797)	Tmx4 (MGP_PahariEiJ_G0025796)	Hao1 (MGP_PahariEiJ_G0025795) #7	Bmp2 (MGP_PahariEiJ_G0025794) #10	Fermt1 (MGP_PahariEiJ_G0025793) #11	Lrrn4 (MGP_PahariEiJ_G0025792) #12	Crls1 (MGP_PahariEiJ_G0025791) #13	Mcm8 (MGP_PahariEiJ_G0025790) #15	Trmt6 (MGP_PahariEiJ_G0025789) #14	Chgb (MGP_PahariEiJ_G0025788) #16	Shld1 (MGP_PahariEiJ_G0025787) #17	MGP_PahariEiJ_G0025786 #18	Prokr2 (MGP_PahariEiJ_G0025785) #20	Cds2 (MGP_PahariEiJ_G0025784) #21	Pcna (MGP_PahariEiJ_G0025783) #22	Tmem230 (MGP_PahariEiJ_G0025782) ##23	Slc23a2 (MGP_PahariEiJ_G0025781) #24	Rassf2 (MGP_PahariEiJ_G0025780) #25	MGP_PahariEiJ_G0025779 #26	MGP_PahariEiJ_G0025778 #26	Prnp (MGP_PahariEiJ_G0025777) #27	Erv3 (MGP_PahariEiJ_G0025776)	Adra1d (MGP_PahariEiJ_G0025775)	Smox (MGP_PahariEiJ_G0025774)	Rnf24 (MGP_PahariEiJ_G0025773)	Pank2 (MGP_PahariEiJ_G0025772)	Mavs (MGP_PahariEiJ_G0025771)	MGP_PahariEiJ_G0025770	Cdc25b (MGP_PahariEiJ_G0025769)	Cenpb (MGP_PahariEiJ_G0025768)
Rat	MODERN SPECIES	13	Plcb4 (ENSRNOG00000033119)	Plcb1 (ENSRNOG00000004810)	Tmx4 (ENSRNOG00000024852)	Hao1 (ENSRNOG00000004601) #7	Bmp2 (ENSRNOG00000071010) #10	Fermt1 (ENSRNOG00000021274) #11	Lrrn4 (ENSRNOG00000032989) #12	Crls1 (ENSRNOG00000021273) #13	Mcm8 (ENSRNOG00000021272) #15	Trmt6 (ENSRNOG00000021270) #14	Chgb (ENSRNOG00000021269) #16	Shld1 (ENSRNOG00000021268) #17	Gpcpd1 (ENSRNOG00000053201) #18	Prokr2 (ENSRNOG00000021266) #20	Cds2 (ENSRNOG00000021265) #21	Pcna (ENSRNOG00000021264) #22	Slc23a2 (ENSRNOG00000021262) #24	Rassf2 (ENSRNOG00000021261) #25	Prnd (ENSRNOG00000021260) #26	ENSRNOG00000070982	Prnp (ENSRNOG00000021259) #27	Ervv-2 (ENSRNOG00000045581)	Adra1d (ENSRNOG00000021256)	Smox (ENSRNOG00000021255)	LOC108350566 (ENSRNOG00000053070)	AABR07053749.1 (ENSRNOG00000038259)	Rnf24 (ENSRNOG00000021250)	Pank2 (ENSRNOG00000025286)	Mavs (ENSRNOG00000025295)	Ap5s1 (ENSRNOG00000021249)	Cdc25b (ENSRNOG00000021248)
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	946															Cds2 (ENSNGAG00000023718) #21	ENSNGAG00000022844 #22	Tmem230 (ENSNGAG00000015533) ##23	Slc23a2 (ENSNGAG00000013741) #24	Rassf2 (ENSNGAG00000021810) #25	Prnd (ENSNGAG00000012939) #26	Prnp (ENSNGAG00000019919) #27	Adra1d (ENSNGAG00000016901)	Smox (ENSNGAG00000022032)	Rnf24 (ENSNGAG00000020612)	Pank2 (ENSNGAG00000016939)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Rab8a (ENSNGAG00000007021)	ENSNGAG00000022972	Cib3 (ENSNGAG00000004267)	Fam32a (ENSNGAG00000021828)	Ap1m1 (ENSNGAG00000022674)	Klf2 (ENSNGAG00000022236)	Eps15l1 (ENSNGAG00000003492)	Calr3 (ENSNGAG00000022659)	1700030K09Rik (ENSNGAG00000022589)	Cherp (ENSNGAG00000023323)	Slc35e1 (ENSNGAG00000021910)	Med26 (ENSNGAG00000013875)	Smim7 (ENSNGAG00000019358)	Tmem38a (ENSNGAG00000016799)	Nwd1 (ENSNGAG00000016596)	ENSNGAG00000022598 #22	Sin3b (ENSNGAG00000023179)	F2rl3 (ENSNGAG00000022079)	Haus8 (ENSNGAG00000024287)	Myo9b (ENSNGAG00000019200)	Use1 (ENSNGAG00000011677)	Ocel1 (ENSNGAG00000012935)	Nr2f6 (ENSNGAG00000021444)	Ushbp1 (ENSNGAG00000002250)	Babam1 (ENSNGAG00000022383)	Abhd8 (ENSNGAG00000022805)	Mrpl34 (ENSNGAG00000018101)	ENSNGAG00000009898	Ano8 (ENSNGAG00000015730)	Gtpbp3 (ENSNGAG00000017920)	Ccdc194 (ENSNGAG00000012696)
Kangaroo rat	MODERN SPECIES	332	ENSDORG00000024865	Hao1 (ENSDORG00000011791) #7	ENSDORG00000023360	Bmp2 (ENSDORG00000010717) #10	Fermt1 (ENSDORG00000004087) #11	Lrrn4 (ENSDORG00000004085) #12	Crls1 (ENSDORG00000024410) #13	Mcm8 (ENSDORG00000006459) #15	Trmt6 (ENSDORG00000006458) #14	Chgb (ENSDORG00000025997) #16	Shld1 (ENSDORG00000024171) #17	Gpcpd1 (ENSDORG00000004049) #18	ENSDORG00000030177	Prokr2 (ENSDORG00000028419) #20	Cds2 (ENSDORG00000004029) #21	Pcna (ENSDORG00000025477) #22	Tmem230 (ENSDORG00000028082) ##23	Slc23a2 (ENSDORG00000028375) #24	Rassf2 (ENSDORG00000014376) #25	Prnp (ENSDORG00000026711) #27	Adra1d (ENSDORG00000009804)	ENSDORG00000029360	Smox (ENSDORG00000002138)	Rnf24 (ENSDORG00000010880)	Pank2 (ENSDORG00000003857)	ENSDORG00000003855	Ap5s1 (ENSDORG00000025441)	Cdc25b (ENSDORG00000003852)	Cenpb (ENSDORG00000003851)	Spef1 (ENSDORG00000003850)	1700037H04Rik (ENSDORG00000026291)
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.y #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Alpin marmot	MODERN SPECIES		LAMP5 (ENSMMMG00000001236)	PLCB4 (ENSMMMG00000001147)	PLCB1 (ENSMMMG00000000929)	ENSMMMG00000000869	HAO1 (ENSMMMG00000000837) #7	FERMT1 (ENSMMMG00000000790) #11	LRRN4 (ENSMMMG00000000765) #12	CRLS1 (ENSMMMG00000000728) #13	MCM8 (ENSMMMG00000000639) #15	TRMT6 (ENSMMMG00000000614) #14	CHGB (ENSMMMG00000000597) #16	SHLD1 (ENSMMMG00000000588) #17	GPCPD1 (ENSMMMG00000000455) #18	PROKR2 (ENSMMMG00000000400) #20	CDS2 (ENSMMMG00000000346) #21	ENSMMMG00000000309 #22	TMEM230 (ENSMMMG00000000268) ##23	ENSMMMG00000000257	SLC23A2 (ENSMMMG00000000215) #24	RASSF2 (ENSMMMG00000000162) #25	PRND (ENSMMMG00000000142) #26	PRNP (ENSMMMG00000000138) #27	ENSMMMG00000000123	SMOX (ENSMMMG00000000044)	ENSMMMG00000023958	PANK2 (ENSMMMG00000023957)	MAVS (ENSMMMG00000023955)	AP5S1 (ENSMMMG00000023953)	CDC25B (ENSMMMG00000023949)	CENPB (ENSMMMG00000023947)	SPEF1 (ENSMMMG00000023946)
Marmotini_b	ANCESTRAL SPECIES	18	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.y #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Squirrel	MODERN SPECIES	85	PLCB4 (ENSSTOG00000000429)	PLCB1 (ENSSTOG00000016167)	TMX4 (ENSSTOG00000003933)	HAO1 (ENSSTOG00000003924) #7	BMP2 (ENSSTOG00000020624) #10	FERMT1 (ENSSTOG00000015791) #11	LRRN4 (ENSSTOG00000026161) #12	ENSSTOG00000015789 #13	MCM8 (ENSSTOG00000006886) #15	TRMT6 (ENSSTOG00000006863) #14	CHGB (ENSSTOG00000026111) #16	SHLD1 (ENSSTOG00000030849) #17	GPCPD1 (ENSSTOG00000006827) #18	PROKR2 (ENSSTOG00000023584) #20	CDS2 (ENSSTOG00000006739) #21	ENSSTOG00000026676 #22	TMEM230 (ENSSTOG00000019378) ##23	SLC23A2 (ENSSTOG00000015561) #24	RASSF2 (ENSSTOG00000015554) #25	PRND (ENSSTOG00000015465) #26	PRNP (ENSSTOG00000015372) #27	ADRA1D (ENSSTOG00000027171)	SMOX (ENSSTOG00000019673)	RNF24 (ENSSTOG00000015491)	PANK2 (ENSSTOG00000015478)	MAVS (ENSSTOG00000015461)	AP5S1 (ENSSTOG00000020496)	ENSSTOG00000024587	CENPB (ENSSTOG00000024375)	SPEF1 (ENSSTOG00000006040)	ADISSP (ENSSTOG00000006026)
Arctic ground squirrel	MODERN SPECIES	39	PLCB4 (ENSUPAG00010000371)	PLCB1 (ENSUPAG00010000601)	TMX4 (ENSUPAG00010000875)	HAO1 (ENSUPAG00010000904) #7	BMP2 (ENSUPAG00010000914) #10	FERMT1 (ENSUPAG00010000919) #11	LRRN4 (ENSUPAG00010000947) #12	CRLS1 (ENSUPAG00010000963) #13	MCM8 (ENSUPAG00010001002) #15	TRMT6 (ENSUPAG00010001068) #14	CHGB (ENSUPAG00010001076) #16	SHLD1 (ENSUPAG00010001091) #17	GPCPD1 (ENSUPAG00010001103) #18	PROKR2 (ENSUPAG00010001409) #20	CDS2 (ENSUPAG00010001423) #21	PCNA (ENSUPAG00010001469) #22	ENSUPAG00010001490 ##23	ENSUPAG00010001549	SLC23A2 (ENSUPAG00010001560) #24	ENSUPAG00010001642	PRND (ENSUPAG00010001659) #26	PRNP (ENSUPAG00010001664) #27	ENSUPAG00010001675	ADRA1D (ENSUPAG00010001689)	SMOX (ENSUPAG00010001694)	RNF24 (ENSUPAG00010001803)	PANK2 (ENSUPAG00010001840)	ENSUPAG00010001866	AP5S1 (ENSUPAG00010001904)	CDC25B (ENSUPAG00010001922)	CENPB (ENSUPAG00010001970)
Marmotini	ANCESTRAL SPECIES																	ENSGT00390000004965.z #22
Alpin marmot	MODERN SPECIES	97	ENSMMMG00000009570	ENSMMMG00000009576	TANC2 (ENSMMMG00000009607)	ENSMMMG00000009634	CYB561 (ENSMMMG00000009645)	ACE (ENSMMMG00000009655)	ENSMMMG00000009720	KCNH6 (ENSMMMG00000009756)	DCAF7 (ENSMMMG00000009832)	TACO1 (ENSMMMG00000009841)	MAP3K3 (ENSMMMG00000009851)	ENSMMMG00000009870	LIMD2 (ENSMMMG00000009910)	STRADA (ENSMMMG00000009934)	CCDC47 (ENSMMMG00000010015)	ENSMMMG00000010027 #22	DDX42 (ENSMMMG00000010051)	FTSJ3 (ENSMMMG00000010083)	ENSMMMG00000010130	SMARCD2 (ENSMMMG00000010172)	ENSMMMG00000010214	ENSMMMG00000010241	CD79B (ENSMMMG00000010255)	SCN4A (ENSMMMG00000010268)	ICAM2 (ENSMMMG00000010305)	ERN1 (ENSMMMG00000010321)	TEX2 (ENSMMMG00000010383)	PECAM1 (ENSMMMG00000010408)	ENSMMMG00000010771	POLG2 (ENSMMMG00000010776)	DDX5 (ENSMMMG00000010795)
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00390000004965.z #22
Squirrel	MODERN SPECIES	141	MRC2 (ENSSTOG00000029005)	MARCHF10 (ENSSTOG00000022696)	TANC2 (ENSSTOG00000009340)	CYB561 (ENSSTOG00000013053)	ACE (ENSSTOG00000009371)	ENSSTOG00000024439	KCNH6 (ENSSTOG00000009407)	DCAF7 (ENSSTOG00000027877)	TACO1 (ENSSTOG00000009424)	MAP3K3 (ENSSTOG00000008864)	ENSSTOG00000028780	LIMD2 (ENSSTOG00000008884)	STRADA (ENSSTOG00000008891)	CCDC47 (ENSSTOG00000008908)	ENSSTOG00000033061	ENSSTOG00000026806 #22	DDX42 (ENSSTOG00000008922)	FTSJ3 (ENSSTOG00000021265)	ENSSTOG00000008945	SMARCD2 (ENSSTOG00000008962)	ENSSTOG00000026223	ENSSTOG00000008984	CD79B (ENSSTOG00000009000)	SCN4A (ENSSTOG00000009013)	PRR29 (ENSSTOG00000030600)	ICAM2 (ENSSTOG00000009058)	ERN1 (ENSSTOG00000009067)	TEX2 (ENSSTOG00000028689)	PECAM1 (ENSSTOG00000021605)	POLG2 (ENSSTOG00000012523)	DDX5 (ENSSTOG00000012526)
Eurasian red squirrel	MODERN SPECIES	11	BMP2 (ENSSVLG00005003170) #10	ENSSVLG00005003182	FERMT1 (ENSSVLG00005003198) #11	LRRN4 (ENSSVLG00005003257) #12	CRLS1 (ENSSVLG00005003281) #13	MCM8 (ENSSVLG00005005844) #15	TRMT6 (ENSSVLG00005005900) #14	CHGB (ENSSVLG00005005939) #16	SHLD1 (ENSSVLG00005005977) #17	ENSSVLG00005005999	GPCPD1 (ENSSVLG00005006029) #18	ENSSVLG00005006071	ENSSVLG00005006103	PROKR2 (ENSSVLG00005006125) #20	CDS2 (ENSSVLG00005006161) #21	PCNA (ENSSVLG00005006209) #22	TMEM230 (ENSSVLG00005006241) ##23	SLC23A2 (ENSSVLG00005006282) #24	RASSF2 (ENSSVLG00005006306) #25	PRND (ENSSVLG00005006355) #26	ENSSVLG00005006376 #27	ADRA1D (ENSSVLG00005006389)	SMOX (ENSSVLG00005006435)	RNF24 (ENSSVLG00005006495)	PANK2 (ENSSVLG00005006509)	MAVS (ENSSVLG00005006580)	ENSSVLG00005006627	ENSSVLG00005006642	CDC25B (ENSSVLG00005006777)	CENPB (ENSSVLG00005007124)	SPEF1 (ENSSVLG00005007146)
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Guinea pig	MODERN SPECIES	8	TMX4 (ENSCPOG00000000445)	HAO1 (ENSCPOG00000000444) #7	BMP2 (ENSCPOG00000031437) #10	FERMT1 (ENSCPOG00000014572) #11	LRRN4 (ENSCPOG00000006778) #12	CRLS1 (ENSCPOG00000000449) #13	MCM8 (ENSCPOG00000000447) #15	TRMT6 (ENSCPOG00000013809) #14	CHGB (ENSCPOG00000000446) #16	SHLD1 (ENSCPOG00000032715) #17	ENSCPOG00000022536	ENSCPOG00000040610	GPCPD1 (ENSCPOG00000008966) #18	PROKR2 (ENSCPOG00000032162) #20	CDS2 (ENSCPOG00000020201) #21	PCNA (ENSCPOG00000009242) #22	TMEM230 (ENSCPOG00000009237) ##23	SLC23A2 (ENSCPOG00000009968) #24	RASSF2 (ENSCPOG00000014905) #25	PRND (ENSCPOG00000040521) #26	PRNP (ENSCPOG00000030983) #27	ADRA1D (ENSCPOG00000039340)	SMOX (ENSCPOG00000024093)	RNF24 (ENSCPOG00000002411)	ENSCPOG00000035031	MAVS (ENSCPOG00000012319)	AP5S1 (ENSCPOG00000034150)	CDC25B (ENSCPOG00000007223)	CENPB (ENSCPOG00000007221)	SPEF1 (ENSCPOG00000035881)	ADISSP (ENSCPOG00000007216)
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	72			ZSCAN25 (ENSODEG00000012099)	ZNF655 (ENSODEG00000011702)	ZKSCAN5 (ENSODEG00000012014)	ENSODEG00000012299	ENSODEG00000011181	BUD31 (ENSODEG00000011226)	ENSODEG00000012197	ARPC1B (ENSODEG00000011865)	ENSODEG00000010891	SMURF1 (ENSODEG00000012098)	TRRAP (ENSODEG00000013196)	TMEM130 (ENSODEG00000010706)	NPTX2 (ENSODEG00000011311)	ENSODEG00000012635 #22	BAIAP2L1 (ENSODEG00000010504)	BRI3 (ENSODEG00000010514)	TECPR1 (ENSODEG00000011578)	LMTK2 (ENSODEG00000012233)	ENSODEG00000011077	ENSODEG00000011251	ENSODEG00000012084	ENSODEG00000011718	EIF2AK1 (ENSODEG00000011509)	ENSODEG00000019832	ENSODEG00000012213	ENSODEG00000012217	CYTH3 (ENSODEG00000011710)	ENSODEG00000010243	ENSODEG00000010724
Degu	MODERN SPECIES	45	ENSODEG00000010991	ENSODEG00000010573	ENSODEG00000010313	ENSODEG00000019813	APAF1 (ENSODEG00000010122)	ENSODEG00000010948	SLC25A3 (ENSODEG00000009995)	ENSODEG00000013377	ENSODEG00000019648	ENSODEG00000019742	ENSODEG00000010263	ENSODEG00000012494	ENSODEG00000011590	NEDD1 (ENSODEG00000009573)	ENSODEG00000014444	ENSODEG00000011350 #22	ENSODEG00000013382	CDK17 (ENSODEG00000012390)	ENSODEG00000012546	LTA4H (ENSODEG00000010622)	HAL (ENSODEG00000008759)	AMDHD1 (ENSODEG00000009067)	CCDC38 (ENSODEG00000010228)	SNRPF (ENSODEG00000010328)	NTN4 (ENSODEG00000009703)	ENSODEG00000008729	VEZT (ENSODEG00000008709)	ENSODEG00000019673	FGD6 (ENSODEG00000009828)	NR2C1 (ENSODEG00000008809)	ENSODEG00000010717
Degu	MODERN SPECIES	101	HAO1 (ENSODEG00000007117) #7	ENSODEG00000006877	ENSODEG00000006563	BMP2 (ENSODEG00000006525) #10	FERMT1 (ENSODEG00000006119) #11	LRRN4 (ENSODEG00000005273) #12	ENSODEG00000005240 #13	MCM8 (ENSODEG00000005354) #15	TRMT6 (ENSODEG00000005657) #14	CHGB (ENSODEG00000005956) #16	SHLD1 (ENSODEG00000005610) #17	ENSODEG00000005435 #18	PROKR2 (ENSODEG00000007520) #20	CDS2 (ENSODEG00000006048) #21	ENSODEG00000007312	ENSODEG00000007131 #22	ENSODEG00000006758 ##23	SLC23A2 (ENSODEG00000005817) #24	RASSF2 (ENSODEG00000005437) #25	ENSODEG00000005714	PRNP (ENSODEG00000019133) #27	ADRA1D (ENSODEG00000005086)	SMOX (ENSODEG00000006624)	RNF24 (ENSODEG00000005604)	PANK2 (ENSODEG00000005402)	MAVS (ENSODEG00000007437)	AP5S1 (ENSODEG00000005338)	CDC25B (ENSODEG00000005076)	CENPB (ENSODEG00000006217)	SPEF1 (ENSODEG00000005543)	ADISSP (ENSODEG00000006785)
Long-tailed chinchilla	MODERN SPECIES	122	PLCB4 (ENSCLAG00000010896)	PLCB1 (ENSCLAG00000012974)	TMX4 (ENSCLAG00000012074)	HAO1 (ENSCLAG00000014360) #7	BMP2 (ENSCLAG00000014626) #10	FERMT1 (ENSCLAG00000012675) #11	LRRN4 (ENSCLAG00000014549) #12	CRLS1 (ENSCLAG00000012625) #13	MCM8 (ENSCLAG00000010809) #15	TRMT6 (ENSCLAG00000013978) #14	CHGB (ENSCLAG00000013375) #16	SHLD1 (ENSCLAG00000014015) #17	GPCPD1 (ENSCLAG00000010012) #18	PROKR2 (ENSCLAG00000010990) #20	CDS2 (ENSCLAG00000014661) #21	PCNA (ENSCLAG00000013382) #22	TMEM230 (ENSCLAG00000012994) ##23	SLC23A2 (ENSCLAG00000015825) #24	RASSF2 (ENSCLAG00000013565) #25	PRND (ENSCLAG00000010974) #26	PRNP (ENSCLAG00000010717) #27	ADRA1D (ENSCLAG00000010677)	SMOX (ENSCLAG00000012093)	RNF24 (ENSCLAG00000011849)	PANK2 (ENSCLAG00000014356)	MAVS (ENSCLAG00000013911)	AP5S1 (ENSCLAG00000013864)	CDC25B (ENSCLAG00000010691)	CENPB (ENSCLAG00000017935)	SPEF1 (ENSCLAG00000013471)	ADISSP (ENSCLAG00000013586)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000049768	ENSHGLG00000018580 #11	ENSHGLG00000040710 #12	CRLS1 (ENSHGLG00000042310) #13	ENSHGLG00000038222 #15	ENSHGLG00000014025	TRMT6 (ENSHGLG00000015405) #14	ENSHGLG00000040668 #16	SHLD1 (ENSHGLG00000016281) #17	ENSHGLG00000017148	ENSHGLG00000032461	GPCPD1 (ENSHGLG00000016170) #18	ENSHGLG00000048779	PROKR2 (ENSHGLG00000044146) #20	CDS2 (ENSHGLG00000016290) #21	Pcna (ENSHGLG00000016974) #22	ENSHGLG00000047122 ##23	ENSHGLG00000041068 #24	ENSHGLG00000038817	RASSF2 (ENSHGLG00000016516) #25	ENSHGLG00000035022 #26	PRNP (ENSHGLG00000011648) #27	SMOX (ENSHGLG00000018296)	RNF24 (ENSHGLG00000044744)	ENSHGLG00000013485	ENSHGLG00000007908	MAVS (ENSHGLG00000038639)	AP5S1 (ENSHGLG00000046927)	CDC25B (ENSHGLG00000015547)	CENPB (ENSHGLG00000021323)	SPEF1 (ENSHGLG00000049284)
Naked mole-rat female	MODERN SPECIES	23	CKAP2L (ENSHGLG00000004964)	IL1A (ENSHGLG00000047729)	IL1B (ENSHGLG00000006083)	ENSHGLG00000007464	ENSHGLG00000034136	ENSHGLG00000008467	IL36G (ENSHGLG00000040519)	IL36A (ENSHGLG00000005025)	ENSHGLG00000042739	IL36B (ENSHGLG00000006883)	IL36RN (ENSHGLG00000007845)	IL1F10 (ENSHGLG00000049458)	IL1RN (ENSHGLG00000048066)	ENSHGLG00000016761	ENSHGLG00000038423	ENSHGLG00000040841 #22	PAX8 (ENSHGLG00000015233)	ENSHGLG00000041113	ENSHGLG00000006231	SEMA6A (ENSHGLG00000014606)	ENSHGLG00000035376	COMMD10 (ENSHGLG00000035743)	ARL14EPL (ENSHGLG00000033293)	LVRN (ENSHGLG00000009169)	ENSHGLG00000040438	ENSHGLG00000007878	ATG12 (ENSHGLG00000041482)	CDO1 (ENSHGLG00000019411)	TMED7 (ENSHGLG00000039198)	TICAM2 (ENSHGLG00000033848)	FEM1C (ENSHGLG00000043263)
Lagomorpha	ANCESTRAL SPECIES	67						ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00930000152756	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Rabbit	MODERN SPECIES	15	ENSOCUG00000032386	ENSOCUG00000036359	ENSOCUG00000008071	ENSOCUG00000027918	FERMT1 (ENSOCUG00000016883) #11	LRRN4 (ENSOCUG00000025681) #12	CRLS1 (ENSOCUG00000009328) #13	MCM8 (ENSOCUG00000009317) #15	TRMT6 (ENSOCUG00000014669) #14	CHGB (ENSOCUG00000028039) #16	SHLD1 (ENSOCUG00000009313) #17	GPCPD1 (ENSOCUG00000024010) #18	ENSOCUG00000037458	PROKR2 (ENSOCUG00000001378) #20	CDS2 (ENSOCUG00000000708) #21	PCNA (ENSOCUG00000004059) #22	ENSOCUG00000004053 ##23	ENSOCUG00000031376	SLC23A2 (ENSOCUG00000006637) #24	RASSF2 (ENSOCUG00000002090) #25	ENSOCUG00000037970	PRND (ENSOCUG00000002089) #26	PRNP (ENSOCUG00000002086) #27	ENSOCUG00000030506	ADRA1D (ENSOCUG00000008029)	SMOX (ENSOCUG00000008024)	RNF24 (ENSOCUG00000011224)	PANK2 (ENSOCUG00000011217)	MAVS (ENSOCUG00000012269)	AP5S1 (ENSOCUG00000011213)	ENSOCUG00000013659
Pika	MODERN SPECIES	4308															CDS2 (ENSOPRG00000008642) #21	ENSOPRG00000008632 #22	ENSOPRG00000008611 #23
Tree shrew	MODERN SPECIES	5794																PCNA (ENSTBEG00000005968) #22	TMEM230 (ENSTBEG00000005676) ##23
Primates	ANCESTRAL SPECIES	17	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Mouse lemur	MODERN SPECIES	9	BMP2 (ENSMICG00000044399) #10	FERMT1 (ENSMICG00000011693) #11	LRRN4 (ENSMICG00000036616) #12	CRLS1 (ENSMICG00000011666) #13	ENSMICG00000036820	ENSMICG00000017611	MCM8 (ENSMICG00000011640) #15	TRMT6 (ENSMICG00000011626) #14	CHGB (ENSMICG00000011615) #16	ENSMICG00000012897	SHLD1 (ENSMICG00000042354) #17	GPCPD1 (ENSMICG00000001862) #18	ENSMICG00000004797	PROKR2 (ENSMICG00000029162) #20	CDS2 (ENSMICG00000009641) #21	PCNA (ENSMICG00000033133) #22	ENSMICG00000042853 ##23	ENSMICG00000032114	SLC23A2 (ENSMICG00000014349) #24	RASSF2 (ENSMICG00000014332) #25	ENSMICG00000014319	ADRA1D (ENSMICG00000048016)	ENSMICG00000035773	SMOX (ENSMICG00000006861)	RNF24 (ENSMICG00000038625)	PANK2 (ENSMICG00000005680)	MAVS (ENSMICG00000034157)	AP5S1 (ENSMICG00000036434)	CDC25B (ENSMICG00000002554)	SPEF1 (ENSMICG00000042314)	ADISSP (ENSMICG00000002548)
Lemuriformes_a	ANCESTRAL SPECIES	78	ENSGT00940000156426	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Coquerels sifaka	MODERN SPECIES	159	PLCB1 (ENSPCOG00000013737)	TMX4 (ENSPCOG00000023284)	HAO1 (ENSPCOG00000024698) #7	BMP2 (ENSPCOG00000028157) #10	FERMT1 (ENSPCOG00000024240) #11	LRRN4 (ENSPCOG00000027763) #12	CRLS1 (ENSPCOG00000020066) #13	MCM8 (ENSPCOG00000024387) #15	TRMT6 (ENSPCOG00000020723) #14	CHGB (ENSPCOG00000002041) #16	SHLD1 (ENSPCOG00000019063) #17	GPCPD1 (ENSPCOG00000008878) #18	ENSPCOG00000023289	PROKR2 (ENSPCOG00000025360) #20	CDS2 (ENSPCOG00000024729) #21	PCNA (ENSPCOG00000015805) #22	TMEM230 (ENSPCOG00000004951) ##23	ENSPCOG00000011991	SLC23A2 (ENSPCOG00000017073) #24	RASSF2 (ENSPCOG00000001538) #25	ADRA1D (ENSPCOG00000023171)	SMOX (ENSPCOG00000023860)	RNF24 (ENSPCOG00000025944)	PANK2 (ENSPCOG00000019248)	MAVS (ENSPCOG00000021718)	ENSPCOG00000026682	AP5S1 (ENSPCOG00000014319)	CDC25B (ENSPCOG00000023884)	CENPB (ENSPCOG00000013623)	SPEF1 (ENSPCOG00000020099)	ADISSP (ENSPCOG00000024292)
Greater bamboo lemur	MODERN SPECIES	835														PROKR2 (ENSPSMG00000008458) #20	CDS2 (ENSPSMG00000008483) #21	PCNA (ENSPSMG00000008507) #22
Bushbaby	MODERN SPECIES	140	PLCB4 (ENSOGAG00000007259)	PLCB1 (ENSOGAG00000006606)	TMX4 (ENSOGAG00000030642)	HAO1 (ENSOGAG00000009148) #7	BMP2 (ENSOGAG00000006349) #10	FERMT1 (ENSOGAG00000012957) #11	LRRN4 (ENSOGAG00000012955) #12	CRLS1 (ENSOGAG00000012953) #13	MCM8 (ENSOGAG00000012951) #15	TRMT6 (ENSOGAG00000012950) #14	CHGB (ENSOGAG00000029848) #16	ENSOGAG00000007959	GPCPD1 (ENSOGAG00000007955) #18	PROKR2 (ENSOGAG00000007998) #20	CDS2 (ENSOGAG00000010795) #21	PCNA (ENSOGAG00000033161) #22	TMEM230 (ENSOGAG00000001386) ##23	SLC23A2 (ENSOGAG00000002077) #24	RASSF2 (ENSOGAG00000004527) #25	PRNP (ENSOGAG00000004526) #27	ENSOGAG00000029300	ENSOGAG00000025947	ADRA1D (ENSOGAG00000031250)	SMOX (ENSOGAG00000031375)	RNF24 (ENSOGAG00000008109)	PANK2 (ENSOGAG00000008104)	MAVS (ENSOGAG00000000635)	AP5S1 (ENSOGAG00000008427)	CDC25B (ENSOGAG00000008425)	CENPB (ENSOGAG00000034679)	SPEF1 (ENSOGAG00000008208)
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Tarsier	MODERN SPECIES	5227														PROKR2 (ENSTSYG00000001029) #20	CDS2 (ENSTSYG00000013452) #21	PCNA (ENSTSYG00000027832) #22	TMEM230 (ENSTSYG00000036086) ##23
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00910000147638	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Catarrhini	DUPLICATION
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00940000153511.b.k.b	ENSGT00940000154343.f	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Hominidae	ANCESTRAL SPECIES	18	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00940000153511.b.k.b	ENSGT00940000154343.f	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000153096.b.d.fb.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00940000153511.b.k.b	ENSGT00940000154343.f	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970.e #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00390000005569.x.a.a.a.a.a.a	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000153096.b.d.fb.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Gorilla	MODERN SPECIES	11	HAO1 (ENSGGOG00000004361) #7	BMP2 (ENSGGOG00000022622) #10	ENSGGOG00000036148	ENSGGOG00000042352	FERMT1 (ENSGGOG00000013823) #11	LRRN4 (ENSGGOG00000013818) #12	CRLS1 (ENSGGOG00000013808) #13	MCM8 (ENSGGOG00000008602) #15	TRMT6 (ENSGGOG00000008597) #14	CHGB (ENSGGOG00000008592) #16	SHLD1 (ENSGGOG00000027511) #17	ENSGGOG00000041872	GPCPD1 (ENSGGOG00000011512) #18	PROKR2 (ENSGGOG00000014211) #20	CDS2 (ENSGGOG00000012340) #21	PCNA (ENSGGOG00000001695) #22	ENSGGOG00000023651 #23	ENSGGOG00000042685	SLC23A2 (ENSGGOG00000007866) #24	RASSF2 (ENSGGOG00000036959) #25	PRND (ENSGGOG00000041952) #26	PRNP (ENSGGOG00000036480) #27	ENSGGOG00000038650	ADRA1D (ENSGGOG00000010672)	SMOX (ENSGGOG00000010669)	ENSGGOG00000044044	RNF24 (ENSGGOG00000014698)	ENSGGOG00000043089	ENSGGOG00000041848	ENSGGOG00000010184	MAVS (ENSGGOG00000010178)
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970.e #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00390000005569.x.a.a.a.a.a.a	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000153096.b.d.fb.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Pan	ANCESTRAL SPECIES	15	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00940000153511.b.k.b	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970.e #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00390000005569.x.a.a.a.a.a.a	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000153096.b.d.fb.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524
Chimpanzee	MODERN SPECIES	11	TMX4 (ENSPTRG00000042827)	HAO1 (ENSPTRG00000013239) #7	BMP2 (ENSPTRG00000013238) #10	ENSPTRG00000051084	FERMT1 (ENSPTRG00000044305) #11	LRRN4 (ENSPTRG00000013235) #12	CRLS1 (ENSPTRG00000013234) #13	MCM8 (ENSPTRG00000013233) #15	TRMT6 (ENSPTRG00000013231) #14	CHGB (ENSPTRG00000013230) #16	SHLD1 (ENSPTRG00000013229) #17	ENSPTRG00000044461	GPCPD1 (ENSPTRG00000013228) #18	PROKR2 (ENSPTRG00000049500) #20	CDS2 (ENSPTRG00000013223) #21	PCNA (ENSPTRG00000013222) #22	TMEM230 (ENSPTRG00000013221) ##23	ENSPTRG00000043288	SLC23A2 (ENSPTRG00000013220) #24	RASSF2 (ENSPTRG00000013219) #25	PRND (ENSPTRG00000042964) #26	PRNP (ENSPTRG00000046640) #27	ENSPTRG00000052228	ADRA1D (ENSPTRG00000013215)	SMOX (ENSPTRG00000013214)	ENSPTRG00000041932	RNF24 (ENSPTRG00000049550)	PANK2 (ENSPTRG00000013211)	MAVS (ENSPTRG00000013209)	AP5S1 (ENSPTRG00000013207)	CDC25B (ENSPTRG00000013206)
Bonobo	MODERN SPECIES	11	HAO1 (ENSPPAG00000015346) #7	BMP2 (ENSPPAG00000030492) #10	ENSPPAG00000036250	FERMT1 (ENSPPAG00000019043) #11	LRRN4 (ENSPPAG00000025703) #12	CRLS1 (ENSPPAG00000040422) #13	MCM8 (ENSPPAG00000033799) #15	TRMT6 (ENSPPAG00000036809) #14	CHGB (ENSPPAG00000032536) #16	SHLD1 (ENSPPAG00000003689) #17	ENSPPAG00000040542	GPCPD1 (ENSPPAG00000041789) #18	ENSPPAG00000007066	PROKR2 (ENSPPAG00000033685) #20	CDS2 (ENSPPAG00000038066) #21	PCNA (ENSPPAG00000033332) #22	TMEM230 (ENSPPAG00000030352) ##23	ENSPPAG00000029146	SLC23A2 (ENSPPAG00000033456) #24	RASSF2 (ENSPPAG00000027320) #25	PRND (ENSPPAG00000008942) #26	PRNP (ENSPPAG00000009834) #27	ENSPPAG00000039353	ADRA1D (ENSPPAG00000038638)	SMOX (ENSPPAG00000039354)	ENSPPAG00000037770	RNF24 (ENSPPAG00000034565)	ENSPPAG00000029297	MAVS (ENSPPAG00000026515)	AP5S1 (ENSPPAG00000015838)	CDC25B (ENSPPAG00000037626)
Human	MODERN SPECIES	12	PLCB1 (ENSG00000182621)	TMX4 (ENSG00000125827)	HAO1 (ENSG00000101323) #7	BMP2 (ENSG00000125845) #10	FERMT1 (ENSG00000101311) #11	LRRN4 (ENSG00000125872) #12	CRLS1 (ENSG00000088766) #13	ENSG00000286235	MCM8 (ENSG00000125885) #15	TRMT6 (ENSG00000089195) #14	CHGB (ENSG00000089199) #16	SHLD1 (ENSG00000171984) #17	GPCPD1 (ENSG00000125772) #18	PROKR2 (ENSG00000101292) #20	CDS2 (ENSG00000101290) #21	PCNA (ENSG00000132646) #22	TMEM230 (ENSG00000089063) ##23	SLC23A2 (ENSG00000089057) #24	RASSF2 (ENSG00000101265) #25	PRND (ENSG00000171864) #26	PRNP (ENSG00000171867) #27	ADRA1D (ENSG00000171873)	SMOX (ENSG00000088826)	RNF24 (ENSG00000101236)	PANK2 (ENSG00000125779)	MAVS (ENSG00000088888)	AP5S1 (ENSG00000125843)	CDC25B (ENSG00000101224)	CENPB (ENSG00000125817)	SPEF1 (ENSG00000101222)	ADISSP (ENSG00000101220)
Orangutan	MODERN SPECIES	11	CST7 (ENSPPYG00000010779)	APMAP (ENSPPYG00000010780)	ACSS1 (ENSPPYG00000010781)	VSX1 (ENSPPYG00000010782)	ENTPD6 (ENSPPYG00000010783)	PYGB (ENSPPYG00000010785)	ABHD12 (ENSPPYG00000010786)	GINS1 (ENSPPYG00000010787)	NINL (ENSPPYG00000010788)	NANP (ENSPPYG00000040950)	ZNF337 (ENSPPYG00000010790)	ENSPPYG00000010791	PROKR2 (ENSPPYG00000010792) #20	ENSPPYG00000010793	CDS2 (ENSPPYG00000010794) #21	PCNA (ENSPPYG00000010795) #22	TMEM230 (ENSPPYG00000010796) ##23	SLC23A2 (ENSPPYG00000010797) #24	RASSF2 (ENSPPYG00000010798) #25	PRND (ENSPPYG00000010799) #26	PRNP (ENSPPYG00000010800) #27	ADRA1D (ENSPPYG00000010801)	SMOX (ENSPPYG00000010802)	ENSPPYG00000010804	RNF24 (ENSPPYG00000010805)	ENSPPYG00000010806	MAVS (ENSPPYG00000010808)	AP5S1 (ENSPPYG00000010810)	CDC25B (ENSPPYG00000010811)	SPEF1 (ENSPPYG00000036305)	ADISSP (ENSPPYG00000010813)
Gibbon	MODERN SPECIES	3	ACSS1 (ENSNLEG00000015554)	ENSNLEG00000015558	ENTPD6 (ENSNLEG00000015563)	PYGB (ENSNLEG00000015641)	ABHD12 (ENSNLEG00000015658)	ENSNLEG00000015674	GINS1 (ENSNLEG00000015677)	NINL (ENSNLEG00000015689)	NANP (ENSNLEG00000015706)	ZNF337 (ENSNLEG00000028946)	ENSNLEG00000027564	ENSNLEG00000035311	PROKR2 (ENSNLEG00000007731) #20	ENSNLEG00000018558	CDS2 (ENSNLEG00000007730) #21	PCNA (ENSNLEG00000007726) #22	ENSNLEG00000007719 ##23	ENSNLEG00000034302	SLC23A2 (ENSNLEG00000007712) #24	ENSNLEG00000029934 #25	ENSNLEG00000034387	PRNP (ENSNLEG00000032122) #27	ENSNLEG00000034659	SMOX (ENSNLEG00000007689)	RNF24 (ENSNLEG00000007674)	PANK2 (ENSNLEG00000007667)	ENSNLEG00000007664	AP5S1 (ENSNLEG00000032395)	ENSNLEG00000027664	CENPB (ENSNLEG00000018556)	ENSNLEG00000007661
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Rhinopithecus	ANCESTRAL SPECIES	58	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000155186.y	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h.b.a	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810
Golden snub-nosed monkey	MODERN SPECIES	2118				FERMT1 (ENSRROG00000039452) #11	LRRN4 (ENSRROG00000013364) #12	CRLS1 (ENSRROG00000041029) #13	MCM8 (ENSRROG00000045665) #15	TRMT6 (ENSRROG00000045329) #14	ENSRROG00000043609	CHGB (ENSRROG00000043772) #16	SHLD1 (ENSRROG00000042075) #17	GPCPD1 (ENSRROG00000028959) #18	ENSRROG00000043183	PROKR2 (ENSRROG00000043749) #20	CDS2 (ENSRROG00000038769) #21	PCNA (ENSRROG00000029613) #22	ENSRROG00000008372 ##23	SLC23A2 (ENSRROG00000033806) #24	RASSF2 (ENSRROG00000031022) #25	PRNP (ENSRROG00000038201) #27	ENSRROG00000024243	ADRA1D (ENSRROG00000041378)	ENSRROG00000031881	SMOX (ENSRROG00000032991)	ENSRROG00000034153	ENSRROG00000036144	RNF24 (ENSRROG00000044895)	PANK2 (ENSRROG00000033466)	ENSRROG00000030901	AP5S1 (ENSRROG00000029104)	CDC25B (ENSRROG00000035997)
Black snub-nosed monkey	MODERN SPECIES	75		ENSRBIG00000043597	HAO1 (ENSRBIG00000031425) #7	BMP2 (ENSRBIG00000044875) #10	FERMT1 (ENSRBIG00000029384) #11	LRRN4 (ENSRBIG00000038350) #12	CRLS1 (ENSRBIG00000007597) #13	MCM8 (ENSRBIG00000016631) #15	TRMT6 (ENSRBIG00000031132) #14	ENSRBIG00000029791	CHGB (ENSRBIG00000042588) #16	SHLD1 (ENSRBIG00000025353) #17	GPCPD1 (ENSRBIG00000030859) #18	PROKR2 (ENSRBIG00000039728) #20	CDS2 (ENSRBIG00000041092) #21	PCNA (ENSRBIG00000027580) #22	ENSRBIG00000027967 ##23	SLC23A2 (ENSRBIG00000027789) #24	RASSF2 (ENSRBIG00000013928) #25	PRND (ENSRBIG00000033646) #26	PRNP (ENSRBIG00000003130) #27	ENSRBIG00000027395	ADRA1D (ENSRBIG00000028900)	ENSRBIG00000032026	SMOX (ENSRBIG00000036982)	ENSRBIG00000033843	RNF24 (ENSRBIG00000021788)	PANK2 (ENSRBIG00000028866)	MAVS (ENSRBIG00000033881)	AP5S1 (ENSRBIG00000032481)	CDC25B (ENSRBIG00000034530)
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Vervet Monkey	MODERN SPECIES	11	ENSCSAG00000013566	TMX4 (ENSCSAG00000013556)	HAO1 (ENSCSAG00000013525) #7	BMP2 (ENSCSAG00000013514) #10	ENSCSAG00000013506	FERMT1 (ENSCSAG00000013498) #11	LRRN4 (ENSCSAG00000013488) #12	CRLS1 (ENSCSAG00000013478) #13	MCM8 (ENSCSAG00000013471) #15	TRMT6 (ENSCSAG00000013461) #14	CHGB (ENSCSAG00000013449) #16	SHLD1 (ENSCSAG00000013442) #17	GPCPD1 (ENSCSAG00000013433) #18	PROKR2 (ENSCSAG00000013412) #20	CDS2 (ENSCSAG00000013406) #21	PCNA (ENSCSAG00000013400) #22	TMEM230 (ENSCSAG00000013392) ##23	SLC23A2 (ENSCSAG00000013382) #24	RASSF2 (ENSCSAG00000013371) #25	PRND (ENSCSAG00000018757) #26	PRNP (ENSCSAG00000018758) #27	TMEM239 (ENSCSAG00000018759)	PCED1A (ENSCSAG00000013364)	VPS16 (ENSCSAG00000013358)	PTPRA (ENSCSAG00000013344)	GNRH2 (ENSCSAG00000013335)	MRPS26 (ENSCSAG00000013328)	OXT (ENSCSAG00000013313)	AVP (ENSCSAG00000013303)	UBOX5 (ENSCSAG00000013294)	LZTS3 (ENSCSAG00000013291)
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00910000146676	ENSGT00910000148195	ENSGT00940000157626
Macaca	ANCESTRAL SPECIES	16	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00910000147212	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00940000159443	ENSGT00910000146676	ENSGT00910000148195	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Macaca_a	ANCESTRAL SPECIES	18	ENSGT01040000240667.b.a.a	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT01100000263539.b.a.a.a.b.b.a.b.a.a.a.b.a.a.a.b	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00930000152756	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00940000159443	ENSGT00910000146676	ENSGT00910000148195	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Rhesus	MODERN SPECIES	1	TMX4 (ENSMMUG00000021137)	HAO1 (ENSMMUG00000009192) #7	BMP2 (ENSMMUG00000064170) #10	FERMT1 (ENSMMUG00000013749) #11	LRRN4 (ENSMMUG00000064554) #12	MCM8 (ENSMMUG00000013740) #15	TRMT6 (ENSMMUG00000013728) #14	CHGB (ENSMMUG00000013722) #16	SHLD1 (ENSMMUG00000056093) #17	ENSMMUG00000022345	GPCPD1 (ENSMMUG00000001809) #18	ENSMMUG00000064271	PROKR2 (ENSMMUG00000052101) #20	ENSMMUG00000065232	CDS2 (ENSMMUG00000013261) #21	PCNA (ENSMMUG00000013259) #22	TMEM230 (ENSMMUG00000013258) ##23	ENSMMUG00000051736	SLC23A2 (ENSMMUG00000020005) #24	RASSF2 (ENSMMUG00000020004) #25	PRND (ENSMMUG00000061435) #26	PRNP (ENSMMUG00000062847) #27	ENSMMUG00000019949	ADRA1D (ENSMMUG00000052559)	SMOX (ENSMMUG00000020912)	RNF24 (ENSMMUG00000004703)	ENSMMUG00000061641	PANK2 (ENSMMUG00000019956)	ENSMMUG00000051560	MAVS (ENSMMUG00000017150)	AP5S1 (ENSMMUG00000057292)
Crab-eating macaque	MODERN SPECIES	1	TMX4 (ENSMFAG00000043422)	HAO1 (ENSMFAG00000031518) #7	ENSMFAG00000048120	BMP2 (ENSMFAG00000044057) #10	FERMT1 (ENSMFAG00000002752) #11	LRRN4 (ENSMFAG00000034464) #12	CRLS1 (ENSMFAG00000032394) #13	MCM8 (ENSMFAG00000044476) #15	TRMT6 (ENSMFAG00000044360) #14	CHGB (ENSMFAG00000033610) #16	SHLD1 (ENSMFAG00000064833) #17	GPCPD1 (ENSMFAG00000002777) #18	PROKR2 (ENSMFAG00000053526) #20	ENSMFAG00000055737	CDS2 (ENSMFAG00000000273) #21	PCNA (ENSMFAG00000036845) #22	TMEM230 (ENSMFAG00000058913) ##23	SLC23A2 (ENSMFAG00000002700) #24	ENSMFAG00000048527	ENSMFAG00000049661	RASSF2 (ENSMFAG00000042354) #25	PRND (ENSMFAG00000053267) #26	PRNP (ENSMFAG00000033814) #27	ENSMFAG00000051551	ENSMFAG00000056374	ADRA1D (ENSMFAG00000003889)	SMOX (ENSMFAG00000031692)	ENSMFAG00000017248	RNF24 (ENSMFAG00000062635)	ENSMFAG00000055765	ENSMFAG00000044487
Pig-tailed macaque	MODERN SPECIES	574	TMX4 (ENSMNEG00000030652)	HAO1 (ENSMNEG00000044022) #7	BMP2 (ENSMNEG00000036687) #10	FERMT1 (ENSMNEG00000033222) #11	LRRN4 (ENSMNEG00000032006) #12	CRLS1 (ENSMNEG00000031005) #13	MCM8 (ENSMNEG00000033748) #15	TRMT6 (ENSMNEG00000041831) #14	ENSMNEG00000028704	CHGB (ENSMNEG00000038399) #16	SHLD1 (ENSMNEG00000041307) #17	GPCPD1 (ENSMNEG00000036713) #18	ENSMNEG00000019393	PROKR2 (ENSMNEG00000033352) #20	CDS2 (ENSMNEG00000030897) #21	PCNA (ENSMNEG00000031953) #22	TMEM230 (ENSMNEG00000035441) ##23	SLC23A2 (ENSMNEG00000029605) #24	RASSF2 (ENSMNEG00000029702) #25	ADRA1D (ENSMNEG00000043303)	ENSMNEG00000010292	SMOX (ENSMNEG00000041124)	RNF24 (ENSMNEG00000038086)	ENSMNEG00000032833	ENSMNEG00000020381	PANK2 (ENSMNEG00000034606)	MAVS (ENSMNEG00000009026)	AP5S1 (ENSMNEG00000041950)	CDC25B (ENSMNEG00000043818)	CENPB (ENSMNEG00000037528)	SPEF1 (ENSMNEG00000036360)
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00940000170918	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00910000146676	ENSGT00910000148195	ENSGT00940000157626	ENSGT00510000049120
Olive baboon	MODERN SPECIES	7	ENSPANG00000042371	FERMT1 (ENSPANG00000020969) #11	LRRN4 (ENSPANG00000013444) #12	MCM8 (ENSPANG00000022389) #15	TRMT6 (ENSPANG00000009284) #14	CHGB (ENSPANG00000018439) #16	SHLD1 (ENSPANG00000018438) #17	ENSPANG00000050001	GPCPD1 (ENSPANG00000000778) #18	ENSPANG00000043327	ENSPANG00000051098	ENSPANG00000045391	ENSPANG00000045431	PROKR2 (ENSPANG00000000777) #20	CDS2 (ENSPANG00000011724) #21	PCNA (ENSPANG00000017144) #22	TMEM230 (ENSPANG00000011725) ##23	ENSPANG00000050609	SLC23A2 (ENSPANG00000004315) #24	RASSF2 (ENSPANG00000037835) #25	PRND (ENSPANG00000038517) #26	PRNP (ENSPANG00000023998) #27	ENSPANG00000044119	ENSPANG00000040711	ADRA1D (ENSPANG00000003901)	ENSPANG00000019434	SMOX (ENSPANG00000011726)	ENSPANG00000033882	RNF24 (ENSPANG00000022391)	PANK2 (ENSPANG00000009618)	MAVS (ENSPANG00000003902)
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000153596.B.g	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965.db.a #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00910000147638	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00550000074828.a.g.a.h	ENSGT00940000157511	ENSGT00950000182922.a.a.a.a.u.a	ENSGT00940000159443	ENSGT00910000146676	ENSGT00910000148195	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Sooty mangabey	MODERN SPECIES	602	PLCB1 (ENSCATG00000045168)	TMX4 (ENSCATG00000028178)	HAO1 (ENSCATG00000034855) #7	BMP2 (ENSCATG00000045153) #10	FERMT1 (ENSCATG00000021680) #11	LRRN4 (ENSCATG00000039898) #12	CRLS1 (ENSCATG00000034218) #13	MCM8 (ENSCATG00000036849) #15	TRMT6 (ENSCATG00000041111) #14	ENSCATG00000035363	CHGB (ENSCATG00000044258) #16	SHLD1 (ENSCATG00000042365) #17	GPCPD1 (ENSCATG00000044067) #18	PROKR2 (ENSCATG00000043122) #20	CDS2 (ENSCATG00000041193) #21	PCNA (ENSCATG00000030844) #22	TMEM230 (ENSCATG00000030090) ##23	SLC23A2 (ENSCATG00000044247) #24	RASSF2 (ENSCATG00000036174) #25	PRNP (ENSCATG00000041742) #27	ADRA1D (ENSCATG00000045142)	ENSCATG00000000957	SMOX (ENSCATG00000001281)	ENSCATG00000044199	RNF24 (ENSCATG00000039948)	ENSCATG00000036033	ENSCATG00000021287	PANK2 (ENSCATG00000044052)	MAVS (ENSCATG00000031510)	AP5S1 (ENSCATG00000040990)	CDC25B (ENSCATG00000033571)
Drill	MODERN SPECIES	77											ENSMLEG00000042711	ENSMLEG00000037566	GPCPD1 (ENSMLEG00000042935) #18	PROKR2 (ENSMLEG00000009400) #20	CDS2 (ENSMLEG00000038399) #21	PCNA (ENSMLEG00000011036) #22	ENSMLEG00000029498 ##23	ENSMLEG00000041377	SLC23A2 (ENSMLEG00000039013) #24	RASSF2 (ENSMLEG00000034179) #25	ADRA1D (ENSMLEG00000035626)	ENSMLEG00000028123	SMOX (ENSMLEG00000041202)	ENSMLEG00000034106	ENSMLEG00000042021	RNF24 (ENSMLEG00000038261)	ENSMLEG00000006563	PANK2 (ENSMLEG00000042121)	MAVS (ENSMLEG00000042487)	AP5S1 (ENSMLEG00000025443)	CDC25B (ENSMLEG00000019675)
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00940000153460.c.a.a	ENSGT00550000076437	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00940000154517.e.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00940000164483	ENSGT00940000155600.b	ENSGT00990000203619.A.a
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00940000153460.c.a.a	ENSGT00550000076437	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00940000154517.e.b	ENSGT00940000155616.c.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00940000164483	ENSGT00990000203619.A.a
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00940000153460.c.a.a	ENSGT00550000076437	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00940000154517.e.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00940000164483	ENSGT00990000203619.A.a	ENSGT01060000248589.C
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00550000074817.e.a.b	ENSGT00940000153460.c.a.a	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00940000154517.e.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00670000098076.i.b	ENSGT00940000164483	ENSGT00990000203619.A.a
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00550000074817.e.a.b	ENSGT00940000153460.c.a.a	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00940000154517.e.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00940000164483	ENSGT00990000203619.A.a	ENSGT01060000248589.C
Pan	ANCESTRAL SPECIES	6	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000001278.b.a.b	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00550000074817.e.a.b	ENSGT00940000153460.c.a.a	ENSGT00940000162231	ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00940000155202.i.b	ENSGT00940000163638	ENSGT00950000183099.u.a.d.b.c.a.b.a	ENSGT00650000093476.a	ENSGT00940000154517.e.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00390000013305.a.a.w.b	ENSGT00940000154517.f	ENSGT00530000063528.B	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514	ENSGT00670000098076.i.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	865															ENSPTRG00000043803	ENSPTRG00000043966 #22	ENSPTRG00000013506	ENSPTRG00000048108
Chimpanzee	MODERN SPECIES	972	CDK16 (ENSPTRG00000021840)	UBA1 (ENSPTRG00000051849)	ENSPTRG00000047195	RBM10 (ENSPTRG00000021837)	NDUFB11 (ENSPTRG00000021836)	ENSPTRG00000021835	JADE3 (ENSPTRG00000042832)	RP2 (ENSPTRG00000021833)	ENSPTRG00000048765	SLC9A7 (ENSPTRG00000021832)	CHST7 (ENSPTRG00000047325)	ZNF674 (ENSPTRG00000021829)	KRBOX4 (ENSPTRG00000028292)	ENSPTRG00000046665	ENSPTRG00000050409	ENSPTRG00000045568 #22	ENSPTRG00000023212	ENSPTRG00000052108	DIPK2B (ENSPTRG00000034190)	KDM6A (ENSPTRG00000021823)	DUSP21 (ENSPTRG00000041351)	ENSPTRG00000049971	ENSPTRG00000044890	FUNDC1 (ENSPTRG00000044012)	ENSPTRG00000051846	ENSPTRG00000011647	EFHC2 (ENSPTRG00000021820)	ENSPTRG00000049437	NDP (ENSPTRG00000021818)	MAOB (ENSPTRG00000021817)	MAOA (ENSPTRG00000021816)
Bonobo	MODERN SPECIES	369	CDK16 (ENSPPAG00000031958)	UBA1 (ENSPPAG00000039495)	ENSPPAG00000034605	RBM10 (ENSPPAG00000040583)	NDUFB11 (ENSPPAG00000034316)	RGN (ENSPPAG00000034719)	JADE3 (ENSPPAG00000034839)	RP2 (ENSPPAG00000039085)	ENSPPAG00000042846	SLC9A7 (ENSPPAG00000036475)	CHST7 (ENSPPAG00000043319)	ZNF674 (ENSPPAG00000025766)	KRBOX4 (ENSPPAG00000030436)	ENSPPAG00000011075	ENSPPAG00000035211	ENSPPAG00000014856 #22	ENSPPAG00000005389	DIPK2B (ENSPPAG00000037134)	KDM6A (ENSPPAG00000030210)	DUSP21 (ENSPPAG00000007116)	ENSPPAG00000004747	ENSPPAG00000018373	FUNDC1 (ENSPPAG00000030690)	ENSPPAG00000035654	ENSPPAG00000028416	EFHC2 (ENSPPAG00000037009)	ENSPPAG00000041179	NDP (ENSPPAG00000028724)	MAOB (ENSPPAG00000033577)	MAOA (ENSPPAG00000033045)	ENSPPAG00000036386
Gorilla	MODERN SPECIES	523	CDK16 (ENSGGOG00000002494)	UBA1 (ENSGGOG00000007548)	ENSGGOG00000037826	RBM10 (ENSGGOG00000007869)	NDUFB11 (ENSGGOG00000007861)	RGN (ENSGGOG00000024598)	JADE3 (ENSGGOG00000005927)	RP2 (ENSGGOG00000006622)	ENSGGOG00000022295	SLC9A7 (ENSGGOG00000008818)	ENSGGOG00000025638	ZNF674 (ENSGGOG00000013207)	KRBOX4 (ENSGGOG00000036898)	ENSGGOG00000026987	ENSGGOG00000039383	ENSGGOG00000024269 #22	ENSGGOG00000005475	DIPK2B (ENSGGOG00000016660)	KDM6A (ENSGGOG00000006607)	DUSP21 (ENSGGOG00000014141)	RPSA (ENSGGOG00000042156)	FUNDC1 (ENSGGOG00000023311)	ENSGGOG00000040256	ENSGGOG00000027675	EFHC2 (ENSGGOG00000012642)	ENSGGOG00000036253	NDP (ENSGGOG00000013536)	MAOB (ENSGGOG00000000204)	MAOA (ENSGGOG00000008930)	ENSGGOG00000023963	ENSGGOG00000041784
Cercopithecidae	ANCESTRAL SPECIES	49												ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000004965.db.b #22
Golden snub-nosed monkey	MODERN SPECIES	2043																ENSRROG00000037340 #22
Black snub-nosed monkey	MODERN SPECIES	618																ENSRBIG00000030855 #22
Cercopithecinae	ANCESTRAL SPECIES	40												ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22
Cercopithecinae_a	ANCESTRAL SPECIES	41												ENSGT00940000162233.u.a	ENSGT00940000162233.u.b	ENSGT00940000153112.D.n.a.a.a.a.a.a.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22
Cercopithecinae_b	ANCESTRAL SPECIES	168															ENSGT00390000006931.r	ENSGT00390000004965.db.b #22
Cercopithecinae_d	ANCESTRAL SPECIES	76	ENSGT00940000160485	ENSGT00940000156963.a.b	ENSGT00940000158975	ENSGT00940000160369	ENSGT00390000003022	ENSGT00390000014995	ENSGT00940000158722	ENSGT00940000158262	ENSGT00550000074817.f	ENSGT00940000153460.c.a.a	ENSGT00550000076437	ENSGT00940000162231	ENSGT00940000162233.v	ENSGT00940000162233.u.b	ENSGT00390000006931.r	ENSGT00390000004965.db.b #22	ENSGT00520000055625.a	ENSGT00910000148400	ENSGT00940000155202.i.b	ENSGT00940000154517.e.b.b	ENSGT00900000141074.e.a.b.a.b	ENSGT00530000063528.B	ENSGT00390000013305.a.a.w.b	ENSGT00940000154468.hb.a	ENSGT00390000004304	ENSGT00940000161545	ENSGT00940000160514
Drill	MODERN SPECIES	861	USP11 (ENSMLEG00000028383)	CDK16 (ENSMLEG00000031209)	UBA1 (ENSMLEG00000039295)	RBM10 (ENSMLEG00000042685)	NDUFB11 (ENSMLEG00000029278)	RGN (ENSMLEG00000041898)	JADE3 (ENSMLEG00000029268)	RP2 (ENSMLEG00000013688)	ENSMLEG00000035650	SLC9A7 (ENSMLEG00000038634)	ENSMLEG00000000062	CHST7 (ENSMLEG00000017937)	ENSMLEG00000031670	KRBOX4 (ENSMLEG00000032471)	ENSMLEG00000026545	ENSMLEG00000042568 #22	ENSMLEG00000006625	ENSMLEG00000027579	ENSMLEG00000020376	DIPK2B (ENSMLEG00000031253)	KDM6A (ENSMLEG00000028771)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000004965.eb #22
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00390000004965.eb #22	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i	ENSGT01030000234639.A.b.a.b.a.b.b.j.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00910000144115.a.lb	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064
Gibbon	MODERN SPECIES	5	LUZP2 (ENSNLEG00000017841)	CCDC179 (ENSNLEG00000017840)	SVIP (ENSNLEG00000034281)	GAS2 (ENSNLEG00000030202)	FANCF (ENSNLEG00000018180)	SLC17A6 (ENSNLEG00000017837)	ANO5 (ENSNLEG00000017832)	NELL1 (ENSNLEG00000017825)	SLC6A5 (ENSNLEG00000017821)	PRMT3 (ENSNLEG00000017813)	HTATIP2 (ENSNLEG00000027250)	DBX1 (ENSNLEG00000017811)	ENSNLEG00000032578	NAV2 (ENSNLEG00000017807)	ENSNLEG00000028986	ENSNLEG00000033072 #22	E2F8 (ENSNLEG00000017803)	CSRP3 (ENSNLEG00000017801)	ZDHHC13 (ENSNLEG00000017797)	ENSNLEG00000031608	ENSNLEG00000032837	PTPN5 (ENSNLEG00000017791)	IGSF22 (ENSNLEG00000017788)	TMEM86A (ENSNLEG00000017787)	ENSNLEG00000030606	SPTY2D1 (ENSNLEG00000017786)	ENSNLEG00000030850	UEVLD (ENSNLEG00000017785)	TSG101 (ENSNLEG00000017783)	LDHAL6A (ENSNLEG00000017780)	LDHC (ENSNLEG00000028060)
Hominidae	ANCESTRAL SPECIES	1	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00390000004965.eb #22	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i	ENSGT01030000234639.A.b.a.b.a.b.b.j.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00910000144115.a.lb	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064
Orangutan	MODERN SPECIES	2	MUC15 (ENSPPYG00000004119)	LUZP2 (ENSPPYG00000003413)	CCDC179 (ENSPPYG00000038834)	SVIP (ENSPPYG00000031372)	GAS2 (ENSPPYG00000003415)	FANCF (ENSPPYG00000003416)	SLC17A6 (ENSPPYG00000029826)	ANO5 (ENSPPYG00000003417)	NELL1 (ENSPPYG00000003418)	SLC6A5 (ENSPPYG00000003419)	PRMT3 (ENSPPYG00000030153)	ENSPPYG00000003421	DBX1 (ENSPPYG00000003422)	NAV2 (ENSPPYG00000003423)	ENSPPYG00000033030	ENSPPYG00000031150 #22	E2F8 (ENSPPYG00000003424)	CSRP3 (ENSPPYG00000003425)	ZDHHC13 (ENSPPYG00000003426)	MRGPRX1 (ENSPPYG00000034469)	PTPN5 (ENSPPYG00000003430)	IGSF22 (ENSPPYG00000039072)	TMEM86A (ENSPPYG00000003431)	SPTY2D1 (ENSPPYG00000003432)	MISFA (ENSPPYG00000040732)	ENSPPYG00000002907	UEVLD (ENSPPYG00000003433)	TSG101 (ENSPPYG00000003434)	LDHAL6A (ENSPPYG00000003435)	LDHC (ENSPPYG00000003436)	LDHA (ENSPPYG00000003437)
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00390000004965.eb #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00390000004965.eb #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00390000004965.eb #22
Macaca	ANCESTRAL SPECIES																	ENSGT00390000004965.eb #22
Pig-tailed macaque	MODERN SPECIES	131		ENSMNEG00000030509	CCDC179 (ENSMNEG00000041862)	SVIP (ENSMNEG00000019961)	GAS2 (ENSMNEG00000030757)	SLC17A6 (ENSMNEG00000040473)	ANO5 (ENSMNEG00000040575)	NELL1 (ENSMNEG00000023918)	SLC6A5 (ENSMNEG00000045477)	PRMT3 (ENSMNEG00000032665)	HTATIP2 (ENSMNEG00000030788)	DBX1 (ENSMNEG00000041763)	ENSMNEG00000027094	ENSMNEG00000021455	NAV2 (ENSMNEG00000043339)	ENSMNEG00000045165 #22	E2F8 (ENSMNEG00000040013)	CSRP3 (ENSMNEG00000033382)	ZDHHC13 (ENSMNEG00000037030)	PTPN5 (ENSMNEG00000032650)	IGSF22 (ENSMNEG00000035177)	TMEM86A (ENSMNEG00000041047)	SPTY2D1 (ENSMNEG00000038544)	ENSMNEG00000044112	UEVLD (ENSMNEG00000034421)	TSG101 (ENSMNEG00000041853)	LDHAL6A (ENSMNEG00000041126)	ENSMNEG00000024949	LDHC (ENSMNEG00000033782)	ENSMNEG00000042413	GTF2H1 (ENSMNEG00000036878)
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00910000147184	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.c.b ##23	ENSGT00950000182953.C.c #24	ENSGT00910000147638	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Mas night monkey	MODERN SPECIES	1017	ENSANAG00000020975	HAO1 (ENSANAG00000036540) #7	ENSANAG00000022936	BMP2 (ENSANAG00000034707) #10	FERMT1 (ENSANAG00000035182) #11	LRRN4 (ENSANAG00000036399) #12	CRLS1 (ENSANAG00000015919) #13	MCM8 (ENSANAG00000034654) #15	TRMT6 (ENSANAG00000021260) #14	CHGB (ENSANAG00000026139) #16	SHLD1 (ENSANAG00000029247) #17	GPCPD1 (ENSANAG00000034321) #18	ENSANAG00000031858	PROKR2 (ENSANAG00000025735) #20	CDS2 (ENSANAG00000035489) #21	PCNA (ENSANAG00000037488) #22	TMEM230 (ENSANAG00000019309) ##23	ENSANAG00000027334	SLC23A2 (ENSANAG00000036317) #24	RASSF2 (ENSANAG00000027057) #25	PRNP (ENSANAG00000030585) #27	ENSANAG00000037141	ADRA1D (ENSANAG00000021139)	SMOX (ENSANAG00000038168)	ENSANAG00000030550	ENSANAG00000020795	RNF24 (ENSANAG00000027230)	PANK2 (ENSANAG00000035763)	MAVS (ENSANAG00000022862)	AP5S1 (ENSANAG00000023504)	CDC25B (ENSANAG00000024669)
Cebidae	ANCESTRAL SPECIES	13	ENSGT00910000147184	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00910000147638	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a
Marmoset	MODERN SPECIES	17	ENSCJAG00000080165	PLCB1 (ENSCJAG00000021317)	TMX4 (ENSCJAG00000021316)	HAO1 (ENSCJAG00000021311) #7	BMP2 (ENSCJAG00000056600) #10	FERMT1 (ENSCJAG00000021304) #11	LRRN4 (ENSCJAG00000076718) #12	CRLS1 (ENSCJAG00000021302) #13	MCM8 (ENSCJAG00000021298) #15	TRMT6 (ENSCJAG00000021296) #14	CHGB (ENSCJAG00000021295) #16	ENSCJAG00000085637	GPCPD1 (ENSCJAG00000021287) #18	PROKR2 (ENSCJAG00000075683) #20	CDS2 (ENSCJAG00000021280) #21	PCNA (ENSCJAG00000021278) #22	ENSCJAG00000041447 ##23	ENSCJAG00000084500	SLC23A2 (ENSCJAG00000021258) #24	RASSF2 (ENSCJAG00000021256) #25	ENSCJAG00000082163	PRND (ENSCJAG00000046612) #26	PRNP (ENSCJAG00000038964) #27	ADRA1D (ENSCJAG00000021251)	SMOX (ENSCJAG00000021237)	ENSCJAG00000069724	ENSCJAG00000071427	ENSCJAG00000086191	RNF24 (ENSCJAG00000021226)	PANK2 (ENSCJAG00000021217)	MAVS (ENSCJAG00000021211)
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00390000012857.j	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b.d ##23	ENSGT00950000182953.C.c #24	ENSGT00910000147638	ENSGT00940000158546 #25	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Capuchin	MODERN SPECIES	31	BMP2 (ENSCCAG00000017127) #10	FERMT1 (ENSCCAG00000013671) #11	LRRN4 (ENSCCAG00000030748) #12	CRLS1 (ENSCCAG00000037351) #13	MCM8 (ENSCCAG00000026974) #15	TRMT6 (ENSCCAG00000026939) #14	CHGB (ENSCCAG00000026987) #16	SHLD1 (ENSCCAG00000029838) #17	GPCPD1 (ENSCCAG00000025356) #18	ENSCCAG00000030617	ENSCCAG00000023107	ENSCCAG00000030115 #30	PROKR2 (ENSCCAG00000037325) #20	ENSCCAG00000032595	CDS2 (ENSCCAG00000026795) #21	PCNA (ENSCCAG00000037224) #22	ENSCCAG00000028801 ##23	ENSCCAG00000019801	SLC23A2 (ENSCCAG00000027857) #24	RASSF2 (ENSCCAG00000034388) #25	MITD1 (ENSCCAG00000031759)	LIPT1 (ENSCCAG00000018953)	TSGA10 (ENSCCAG00000029564)	C2orf15 (ENSCCAG00000027023)	CRACDL (ENSCCAG00000029992)	MGAT4A (ENSCCAG00000025882)	UNC50 (ENSCCAG00000028599)	COA5 (ENSCCAG00000031470)	INPP4A (ENSCCAG00000032743)	CNGA3 (ENSCCAG00000036994)	ENSCCAG00000035629
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	96	ENSSBOG00000021218	TMX4 (ENSSBOG00000033337)	HAO1 (ENSSBOG00000024043) #7	BMP2 (ENSSBOG00000005226) #10	FERMT1 (ENSSBOG00000020188) #11	LRRN4 (ENSSBOG00000029371) #12	CRLS1 (ENSSBOG00000021138) #13	MCM8 (ENSSBOG00000021991) #15	ENSSBOG00000033602 #14	CHGB (ENSSBOG00000035989) #16	SHLD1 (ENSSBOG00000031220) #17	GPCPD1 (ENSSBOG00000035475) #18	PROKR2 (ENSSBOG00000033563) #20	ENSSBOG00000034740	CDS2 (ENSSBOG00000026888) #21	PCNA (ENSSBOG00000020289) #22	ENSSBOG00000034611 ##23
Bolivian squirrel monkey	MODERN SPECIES	177										CALCRL (ENSSBOG00000032528)	ENSSBOG00000028733	TFPI (ENSSBOG00000024524)	ENSSBOG00000018455	GULP1 (ENSSBOG00000024201)	COL3A1 (ENSSBOG00000032521)	ENSSBOG00000030491 #22	COL5A2 (ENSSBOG00000024117)	ENSSBOG00000020452	WDR75 (ENSSBOG00000019714)	ENSSBOG00000035441	SLC40A1 (ENSSBOG00000022937)	ENSSBOG00000016302	ASNSD1 (ENSSBOG00000007659)	ANKAR (ENSSBOG00000030320)	OSGEPL1 (ENSSBOG00000031666)	ORMDL1 (ENSSBOG00000032805)	PMS1 (ENSSBOG00000033196)	MSTN (ENSSBOG00000026528)	HIBCH (ENSSBOG00000022609)	INPP1 (ENSSBOG00000033808)	MFSD6 (ENSSBOG00000027092)
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT01090000263328	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711
Afrotheria	ANCESTRAL SPECIES	3	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT01090000263328	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00510000049083.b #27	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a
Afrotheria_a	ANCESTRAL SPECIES	3	ENSGT00940000155428	ENSGT00940000160301	ENSGT00390000018717.b.a.a #7	ENSGT00940000155666.c #10	ENSGT00390000013444.a.b.a #11	ENSGT00940000161448 #12	ENSGT00390000001607 #13	ENSGT01090000260080.a #15	ENSGT00390000008327 #14	ENSGT00940000154206.b #16	ENSGT00390000014969 #17	ENSGT01090000263328	ENSGT00440000033970 #18	ENSGT00940000154544.b #20	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00510000049083.b #27	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a
Elephant	MODERN SPECIES	180	PLCB4 (ENSLAFG00000006301)	PLCB1 (ENSLAFG00000002529)	TMX4 (ENSLAFG00000016245)	HAO1 (ENSLAFG00000016239) #7	BMP2 (ENSLAFG00000013216) #10	FERMT1 (ENSLAFG00000016969) #11	LRRN4 (ENSLAFG00000026622) #12	CRLS1 (ENSLAFG00000002495) #13	MCM8 (ENSLAFG00000002492) #15	TRMT6 (ENSLAFG00000032216) #14	ENSLAFG00000028361 #16	ENSLAFG00000026017	GPCPD1 (ENSLAFG00000011687) #18	PROKR2 (ENSLAFG00000006422) #20	CDS2 (ENSLAFG00000006416) #21	PCNA (ENSLAFG00000006413) #22	TMEM230 (ENSLAFG00000006412) #23	SLC23A2 (ENSLAFG00000014049) #24	RASSF2 (ENSLAFG00000004839) #25	PRNP (ENSLAFG00000000850) #27	SMOX (ENSLAFG00000012503)	RNF24 (ENSLAFG00000003126)	PANK2 (ENSLAFG00000003124)	MAVS (ENSLAFG00000003120)	AP5S1 (ENSLAFG00000027541)	CDC25B (ENSLAFG00000021528)	CENPB (ENSLAFG00000022949)	ENSLAFG00000009410	ADISSP (ENSLAFG00000015873)	HSPA12B (ENSLAFG00000015862)	SIGLEC1 (ENSLAFG00000014983)
Hyrax	MODERN SPECIES	11971																PCNA (ENSPCAG00000010500) #22	TMEM230 (ENSPCAG00000010570) #23
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	2849																ENSETEG00000006577 #22
Tenrec	MODERN SPECIES	8932															SIMC1 (ENSETEG00000012959)	ENSETEG00000012962 #22	KIAA1191 (ENSETEG00000012965)
Xenarthra	ANCESTRAL SPECIES	622															ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160795	ENSGT00940000157511
Armadillo	MODERN SPECIES	2223															CDS2 (ENSDNOG00000043050) #21	PCNA (ENSDNOG00000018222) #22	TMEM230 (ENSDNOG00000005724) #23	SLC23A2 (ENSDNOG00000033163) #24	PRND (ENSDNOG00000038326) #26	ENSDNOG00000010376 #27	ENSDNOG00000048364	SMOX (ENSDNOG00000044258)
Sloth	MODERN SPECIES	52																ENSCHOG00000010237 #22	TMEM230 (ENSCHOG00000010231) #23
Marsupialia	ANCESTRAL SPECIES	19	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00930000150969.A.c.b.b	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00390000017260	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00930000150969.A.c.b.b	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00390000017260	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00390000017260	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299
Wallaby	MODERN SPECIES	3823																PCNA (ENSMEUG00000008575) #22
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00390000008255	ENSGT00390000011296	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.a	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877 #21	ENSGT00390000004965 #22	ENSGT00390000008694.b.b #23	ENSGT00950000182953.C.c #24	ENSGT00940000158546 #25	ENSGT00390000017668 #26	ENSGT00510000049083.b #27	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00390000017260	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1017	ENSVURG00010012551	SLC66A3 (ENSVURG00010012545)	ROCK2 (ENSVURG00010012530)	ENSVURG00010012217	ANXA4 (ENSVURG00010012194)	AAK1 (ENSVURG00010012128)	NFU1 (ENSVURG00010012093)	GFPT1 (ENSVURG00010012059)	ANTXR1 (ENSVURG00010012041)	ENSVURG00010012029	GKN2 (ENSVURG00010012013)	ENSVURG00010012002	ENSVURG00010011998	BMP10 (ENSVURG00010011994)	ARHGAP25 (ENSVURG00010011989)	ENSVURG00010011965 #22	TMEM230 (ENSVURG00010011956) #23	SLC23A2 (ENSVURG00010011951) #24	RASSF2 (ENSVURG00010011937) #25	ENSVURG00010011929 #26	PRNP (ENSVURG00010011920) #27	TGFA (ENSVURG00010011914)	ENSVURG00010011904	ENSVURG00010011897	PCYOX1 (ENSVURG00010011890)	TIA1 (ENSVURG00010011866)	C2orf42 (ENSVURG00010011848)	ASPRV1 (ENSVURG00010011841)	MXD1 (ENSVURG00010011831)	SNRNP27 (ENSVURG00010011813)	ADD2 (ENSVURG00010011797)
Common wonbat	MODERN SPECIES	1086	MAP3K8 (ENSVURG00010024347)	MTPAP (ENSVURG00010024344)	ENSVURG00010024343	ENSVURG00010024338	SVIL (ENSVURG00010024042)	ENSVURG00010023999	ZEB1 (ENSVURG00010023993)	ARHGAP12 (ENSVURG00010023985)	KIF5B (ENSVURG00010023979)	EPC1 (ENSVURG00010023973)	ITGB1 (ENSVURG00010023964)	NRP1 (ENSVURG00010023955)	ENSVURG00010023942	ENSVURG00010023939	ENSVURG00010023934	ENSVURG00010023932 #22	CUL2 (ENSVURG00010023920)	CREM (ENSVURG00010023893)	ENSVURG00010023882	ENSVURG00010023881	CCNY (ENSVURG00010023876)	ENSVURG00010023871	FZD8 (ENSVURG00010023869)	ENSVURG00010023867	KLF6 (ENSVURG00010023865) #37	PITRM1 (ENSVURG00010023852) #36	PFKP (ENSVURG00010023845) #35	ENSVURG00010023843	ENSVURG00010023842	ENSVURG00010023841	ADARB2 (ENSVURG00010023834) #34
koala	MODERN SPECIES	20	ENSPCIG00000018616 #20	C2orf50 (ENSPCIG00000018610)	SLC66A3 (ENSPCIG00000018608)	ROCK2 (ENSPCIG00000018605)	ENSPCIG00000018587	ENSPCIG00000019051	ENSPCIG00000019047	NFU1 (ENSPCIG00000026062)	GFPT1 (ENSPCIG00000026063)	ANTXR1 (ENSPCIG00000019206)	ENSPCIG00000002142	GKN2 (ENSPCIG00000002151)	BMP10 (ENSPCIG00000002179)	ARHGAP25 (ENSPCIG00000021124)	CDS2 (ENSPCIG00000019891) #21	PCNA (ENSPCIG00000019890) #22	TMEM230 (ENSPCIG00000019889) #23	SLC23A2 (ENSPCIG00000026565) #24	ENSPCIG00000031003	RASSF2 (ENSPCIG00000019887) #25	ENSPCIG00000019885 #26	PRNP (ENSPCIG00000030958) #27	TGFA (ENSPCIG00000013095)	ENSPCIG00000013093	ENSPCIG00000034187	ENSPCIG00000022813	PCYOX1 (ENSPCIG00000013085)	TIA1 (ENSPCIG00000013084)	C2orf42 (ENSPCIG00000013083)	ASPRV1 (ENSPCIG00000027988)	MXD1 (ENSPCIG00000032401)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000027990	ENSSHAG00000012229	ENSSHAG00000023828	ENSSHAG00000014427	ANXA4 (ENSSHAG00000014539)	AAK1 (ENSSHAG00000015125)	NFU1 (ENSSHAG00000001163)	GFPT1 (ENSSHAG00000002669)	ANTXR1 (ENSSHAG00000006057)	ENSSHAG00000009187	GKN2 (ENSSHAG00000009384)	ENSSHAG00000009468	BMP10 (ENSSHAG00000009959)	ENSSHAG00000010342	ENSSHAG00000011176 #21	PCNA (ENSSHAG00000029450) #22	SLC23A2 (ENSSHAG00000023643) #24	RASSF2 (ENSSHAG00000006466) #25	ENSSHAG00000024435 #26	ENSSHAG00000029721 #27	ENSSHAG00000027641	ENSSHAG00000012319	SNRPG (ENSSHAG00000031755)	PCYOX1 (ENSSHAG00000020850)	TIA1 (ENSSHAG00000012544)	C2orf42 (ENSSHAG00000021724)	ASPRV1 (ENSSHAG00000004646)	ENSSHAG00000028045	ENSSHAG00000020701	ENSSHAG00000008583	ENSSHAG00000010027
Opossum	MODERN SPECIES		ENSMODG00000047076	ENSMODG00000048750	ENSMODG00000011882	ANXA4 (ENSMODG00000011852)	AAK1 (ENSMODG00000011819)	NFU1 (ENSMODG00000011805)	GFPT1 (ENSMODG00000011796)	ANTXR1 (ENSMODG00000011777)	GKN1 (ENSMODG00000011745)	GKN2 (ENSMODG00000011738)	ENSMODG00000011733	BMP10 (ENSMODG00000011697)	ENSMODG00000039729	ARHGAP25 (ENSMODG00000011690)	CDS2 (ENSMODG00000011674) #21	PCNA (ENSMODG00000011649) #22	TMEM230 (ENSMODG00000011655) #23	SLC23A2 (ENSMODG00000011633) #24	RASSF2 (ENSMODG00000011588) #25	ENSMODG00000023187 #26	PRNP (ENSMODG00000011569) #27	TGFA (ENSMODG00000011562)	ENSMODG00000011533	ENSMODG00000011528	PCYOX1 (ENSMODG00000011522)	TIA1 (ENSMODG00000011515)	C2orf42 (ENSMODG00000011505)	MXD1 (ENSMODG00000011481)	SNRNP27 (ENSMODG00000011407)	ADD2 (ENSMODG00000011394)	ENSMODG00000011333
Platypus	MODERN SPECIES	16	C2orf42 (ENSOANG00000048542)	TIA1 (ENSOANG00000042374)	PCYOX1 (ENSOANG00000039140)	SNRPG (ENSOANG00000038295)	ENSOANG00000048476	TGFA (ENSOANG00000045751)	ENSOANG00000045991	ANXA4 (ENSOANG00000032037)	AAK1 (ENSOANG00000036315)	NFU1 (ENSOANG00000010406)	GFPT1 (ENSOANG00000022684)	ANTXR1 (ENSOANG00000049516)	BMP10 (ENSOANG00000013884)	ARHGAP25 (ENSOANG00000042047)	ENSOANG00000048653 #21	ENSOANG00000047428 #22	ENSOANG00000036867 #23	SLC23A2 (ENSOANG00000046766) #24	RASSF2 (ENSOANG00000050398) #25	ENSOANG00000047340 #26	PRNP (ENSOANG00000045653) #27	LRRTM4 (ENSOANG00000001430)	ADRA1A (ENSOANG00000047360)	DPYSL2 (ENSOANG00000039496)	PPP2R2A (ENSOANG00000041383)	EBF2 (ENSOANG00000037491)	ENSOANG00000031714	KCTD9 (ENSOANG00000000499)	ENSOANG00000037092	DOCK5 (ENSOANG00000014390)	NEFL (ENSOANG00000009794)