Theria	ANCESTRAL SPECIES	8	ENSGT00530000063359.B	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00950000185387	ENSGT00940000159535	ENSGT00930000151070
Eutheria	ANCESTRAL SPECIES	3	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00950000185387	ENSGT00940000159535	ENSGT00930000151070
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Primates	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Strepsirrhini	ANCESTRAL SPECIES	35	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00940000161499 #34	ENSGT00940000162878	ENSGT00940000154853.c
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00940000161499 #34	ENSGT00940000162878	ENSGT00940000154853.c	ENSGT00940000154853.d
Greater bamboo lemur	MODERN SPECIES	300																CCND1 (ENSPSMG00000010693) #22	LTO1 (ENSPSMG00000010717) #23	FGF19 (ENSPSMG00000010730) #24	FGF4 (ENSPSMG00000010738) #25	FGF3 (ENSPSMG00000010747) #26	ANO1 (ENSPSMG00000010865) #27	FADD (ENSPSMG00000010924) #28	PPFIA1 (ENSPSMG00000011104) #29	ENSPSMG00000011253 #30	SHANK2 (ENSPSMG00000011450) #31	DHCR7 (ENSPSMG00000011650) #32	NADSYN1 (ENSPSMG00000011720) #33	LGALS12 (ENSPSMG00000011815) #34
Coquerels sifaka	MODERN SPECIES	124	ALDH3B1 (ENSPCOG00000028800)	NDUFS8 (ENSPCOG00000000121)	TCIRG1 (ENSPCOG00000027699)	CHKA (ENSPCOG00000027662)	KMT5B (ENSPCOG00000028166)	C11orf24 (ENSPCOG00000018326)	LRP5 (ENSPCOG00000026929)	PPP6R3 (ENSPCOG00000028586)	GAL (ENSPCOG00000019500)	TESMIN (ENSPCOG00000022912)	CPT1A (ENSPCOG00000000084)	MRPL21 (ENSPCOG00000015404)	IGHMBP2 (ENSPCOG00000018759)	MRGPRF (ENSPCOG00000010107)	TPCN2 (ENSPCOG00000017980)	CCND1 (ENSPCOG00000027474) #22	LTO1 (ENSPCOG00000027650) #23	FGF19 (ENSPCOG00000020362) #24	FGF4 (ENSPCOG00000028304) #25	FGF3 (ENSPCOG00000025992) #26	ANO1 (ENSPCOG00000026720) #27	FADD (ENSPCOG00000022951) #28	PPFIA1 (ENSPCOG00000028686) #29	CTTN (ENSPCOG00000010752) #30	SHANK2 (ENSPCOG00000017133) #31	DHCR7 (ENSPCOG00000020649) #32	NADSYN1 (ENSPCOG00000020772) #33	LGALS12 (ENSPCOG00000027553) #34	PLAAT4 (ENSPCOG00000026183)	PLAAT2 (ENSPCOG00000022949)	PLAAT3 (ENSPCOG00000006605)
Mouse lemur	MODERN SPECIES	27	ALDH3B1 (ENSMICG00000009516)	ENSMICG00000009523	TCIRG1 (ENSMICG00000009530)	CHKA (ENSMICG00000009554)	KMT5B (ENSMICG00000028472)	C11orf24 (ENSMICG00000035582)	LRP5 (ENSMICG00000014388)	PPP6R3 (ENSMICG00000003096)	GAL (ENSMICG00000046807)	TESMIN (ENSMICG00000001063)	CPT1A (ENSMICG00000001068)	MRPL21 (ENSMICG00000046580)	IGHMBP2 (ENSMICG00000043944)	MRGPRF (ENSMICG00000017866)	TPCN2 (ENSMICG00000017867)	CCND1 (ENSMICG00000033113) #22	LTO1 (ENSMICG00000003061) #23	FGF19 (ENSMICG00000047906) #24	FGF4 (ENSMICG00000046252) #25	FGF3 (ENSMICG00000045024) #26	ANO1 (ENSMICG00000017568) #27	FADD (ENSMICG00000047386) #28	ENSMICG00000003755 #29	CTTN (ENSMICG00000003767) #30	ENSMICG00000044974	SHANK2 (ENSMICG00000035602) #31	DHCR7 (ENSMICG00000017094) #32	NADSYN1 (ENSMICG00000017100) #33	LGALS12 (ENSMICG00000010263) #34	TSPAN32 (ENSMICG00000045977)	ENSMICG00000034071
Bushbaby	MODERN SPECIES	249	ALDH3B1 (ENSOGAG00000000789)	NDUFS8 (ENSOGAG00000013220)	TCIRG1 (ENSOGAG00000028104)	CHKA (ENSOGAG00000000790)	KMT5B (ENSOGAG00000025516)	C11orf24 (ENSOGAG00000032648)	LRP5 (ENSOGAG00000007721)	PPP6R3 (ENSOGAG00000007734)	GAL (ENSOGAG00000007742)	TESMIN (ENSOGAG00000007743)	CPT1A (ENSOGAG00000007747)	IGHMBP2 (ENSOGAG00000011671)	MRGPRF (ENSOGAG00000011677)	TPCN2 (ENSOGAG00000014554)	ENSOGAG00000024468	CCND1 (ENSOGAG00000011495) #22	LTO1 (ENSOGAG00000011848) #23	FGF19 (ENSOGAG00000028091) #24	FGF4 (ENSOGAG00000011500) #25	FGF3 (ENSOGAG00000029967) #26	ANO1 (ENSOGAG00000016331) #27	FADD (ENSOGAG00000016337) #28	PPFIA1 (ENSOGAG00000002232) #29	CTTN (ENSOGAG00000002239) #30	SHANK2 (ENSOGAG00000030187) #31
Haplorrhini	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Tarsier	MODERN SPECIES	2498																CCND1 (ENSTSYG00000036017) #22	LTO1 (ENSTSYG00000030410) #23
Simiiformes	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535	ENSGT00390000006347.a
Cebidae	ANCESTRAL SPECIES		ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535	ENSGT00390000006347.a
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33
Capuchin	MODERN SPECIES	562											CPT1A (ENSCCAG00000025290)	MRPL21 (ENSCCAG00000023999)	IGHMBP2 (ENSCCAG00000027106)	MRGPRF (ENSCCAG00000027654)	TPCN2 (ENSCCAG00000035260)	CCND1 (ENSCCAG00000028296) #22	LTO1 (ENSCCAG00000019721) #23	FGF19 (ENSCCAG00000027414) #24	ENSCCAG00000023564 #25	FGF3 (ENSCCAG00000023892) #26
Bolivian squirrel monkey	MODERN SPECIES	184	CHKA (ENSSBOG00000029779)	ENSSBOG00000014251	KMT5B (ENSSBOG00000018620)	ENSSBOG00000017297	C11orf24 (ENSSBOG00000021901)	LRP5 (ENSSBOG00000011522)	PPP6R3 (ENSSBOG00000024673)	GAL (ENSSBOG00000018976)	ENSSBOG00000033953	CPT1A (ENSSBOG00000027234)	MRPL21 (ENSSBOG00000021429)	IGHMBP2 (ENSSBOG00000021342)	MRGPRF (ENSSBOG00000022916)	TPCN2 (ENSSBOG00000036110)	ENSSBOG00000023740	CCND1 (ENSSBOG00000031704) #22	LTO1 (ENSSBOG00000030139) #23	FGF19 (ENSSBOG00000032296) #24	FGF4 (ENSSBOG00000020328) #25	FGF3 (ENSSBOG00000028072) #26	ANO1 (ENSSBOG00000025783) #27	FADD (ENSSBOG00000022673) #28	PPFIA1 (ENSSBOG00000020432) #29	CTTN (ENSSBOG00000021638) #30	SHANK2 (ENSSBOG00000033655) #31	DHCR7 (ENSSBOG00000034440) #32	NADSYN1 (ENSSBOG00000019773) #33
Marmoset	MODERN SPECIES	2	PPP6R3 (ENSCJAG00000015752)	ENSCJAG00000079396	GAL (ENSCJAG00000015858)	TESMIN (ENSCJAG00000015860)	CPT1A (ENSCJAG00000015871)	MRPL21 (ENSCJAG00000015881)	IGHMBP2 (ENSCJAG00000015887)	ENSCJAG00000076956	MRGPRF (ENSCJAG00000079141)	TPCN2 (ENSCJAG00000015902)	ENSCJAG00000080728	ENSCJAG00000087214	ENSCJAG00000056159	ENSCJAG00000079289	ENSCJAG00000079611	CCND1 (ENSCJAG00000044694) #22	ENSCJAG00000075469	LTO1 (ENSCJAG00000078318) #23	FGF19 (ENSCJAG00000075154) #24	FGF4 (ENSCJAG00000005026) #25	FGF3 (ENSCJAG00000009730) #26	ANO1 (ENSCJAG00000071717) #27	ENSCJAG00000086216	FADD (ENSCJAG00000000932) #28	PPFIA1 (ENSCJAG00000000936) #29	CTTN (ENSCJAG00000000985) #30	SHANK2 (ENSCJAG00000001019) #31	ENSCJAG00000066476	ENSCJAG00000070399	DHCR7 (ENSCJAG00000040023) #32	ENSCJAG00000085647 #33
Mas night monkey	MODERN SPECIES	411	CHKA (ENSANAG00000025868)	KMT5B (ENSANAG00000029415)	ENSANAG00000017977	C11orf24 (ENSANAG00000035026)	ENSANAG00000021978	LRP5 (ENSANAG00000027436)	PPP6R3 (ENSANAG00000020950)	GAL (ENSANAG00000038246)	TESMIN (ENSANAG00000011110)	CPT1A (ENSANAG00000017356)	MRPL21 (ENSANAG00000020754)	IGHMBP2 (ENSANAG00000027309)	MRGPRF (ENSANAG00000026421)	TPCN2 (ENSANAG00000022288)	ENSANAG00000022087	CCND1 (ENSANAG00000027376) #22	LTO1 (ENSANAG00000020841) #23	FGF19 (ENSANAG00000028313) #24	FGF4 (ENSANAG00000028917) #25	FGF3 (ENSANAG00000033426) #26	ANO1 (ENSANAG00000037157) #27	FADD (ENSANAG00000030818) #28	PPFIA1 (ENSANAG00000026851) #29	CTTN (ENSANAG00000023720) #30	SHANK2 (ENSANAG00000026955) #31	DHCR7 (ENSANAG00000028986) #32	NADSYN1 (ENSANAG00000028675) #33
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266
Gibbon	MODERN SPECIES	19	TCIRG1 (ENSNLEG00000006527)	CHKA (ENSNLEG00000006538)	KMT5B (ENSNLEG00000033680)	C11orf24 (ENSNLEG00000006549)	LRP5 (ENSNLEG00000006550)	PPP6R3 (ENSNLEG00000006556)	GAL (ENSNLEG00000006599)	TESMIN (ENSNLEG00000006601)	CPT1A (ENSNLEG00000026864)	MRPL21 (ENSNLEG00000006605)	ENSNLEG00000027457	IGHMBP2 (ENSNLEG00000006609)	ENSNLEG00000006613	TPCN2 (ENSNLEG00000006614)	ENSNLEG00000027800	CCND1 (ENSNLEG00000029930) #22	ENSNLEG00000010437 #23	FGF19 (ENSNLEG00000010441) #24	ENSNLEG00000033620	ENSNLEG00000010450 #26	ANO1 (ENSNLEG00000010451) #27	FADD (ENSNLEG00000010467) #28	ENSNLEG00000031707	PPFIA1 (ENSNLEG00000010473) #29	ENSNLEG00000010556 #30	ENSNLEG00000010602 #31	ENSNLEG00000034483 #31	DHCR7 (ENSNLEG00000032731) #32	NADSYN1 (ENSNLEG00000010685) #33	KRTAP5-7 (ENSNLEG00000010786)	ENSNLEG00000028330
Hominidae	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266
Orangutan	MODERN SPECIES	2	C11orf24 (ENSPPYG00000002972)	LRP5 (ENSPPYG00000036218)	PPP6R3 (ENSPPYG00000002970)	GAL (ENSPPYG00000002969)	TESMIN (ENSPPYG00000002968)	CPT1A (ENSPPYG00000002967)	ENSPPYG00000002966	IGHMBP2 (ENSPPYG00000002965)	MRGPRD (ENSPPYG00000002964)	MRGPRF (ENSPPYG00000037582)	TPCN2 (ENSPPYG00000002962)	SMIM38 (ENSPPYG00000032272)	MYEOV (ENSPPYG00000033224)	ENSPPYG00000018627	ENSPPYG00000039142	CCND1 (ENSPPYG00000002961) #22	LTO1 (ENSPPYG00000030489) #23	FGF19 (ENSPPYG00000002960) #24	ENSPPYG00000033162	FGF4 (ENSPPYG00000002958) #25	FGF3 (ENSPPYG00000002957) #26	ANO1 (ENSPPYG00000002956) #27	FADD (ENSPPYG00000002955) #28	PPFIA1 (ENSPPYG00000025904) #29	CTTN (ENSPPYG00000002954) #30	SHANK2 (ENSPPYG00000002953) #31	ENSPPYG00000036563	DHCR7 (ENSPPYG00000033723) #32	NADSYN1 (ENSPPYG00000002948) #33	ZNF195 (ENSPPYG00000002946)	MRGPRE (ENSPPYG00000002945)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266	ENSGT00390000004140.b
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	21	PURG (ENSGGOG00000023416)	TEX15 (ENSGGOG00000027549)	PPP2CB (ENSGGOG00000013978)	ENSGGOG00000016076	GSR (ENSGGOG00000002336)	GTF2E2 (ENSGGOG00000022495)	ENSGGOG00000040201	ENSGGOG00000004813	ENSGGOG00000036324	ENSGGOG00000044205	DCTN6 (ENSGGOG00000013074)	MBOAT4 (ENSGGOG00000003396)	ENSGGOG00000012811	ENSGGOG00000025722	SARAF (ENSGGOG00000022354)	ENSGGOG00000022765 #22	PSKH2 (ENSGGOG00000000087)	ATP6V0D2 (ENSGGOG00000013754)	SLC7A13 (ENSGGOG00000008511)	WWP1 (ENSGGOG00000014988)	RMDN1 (ENSGGOG00000015004)	ENSGGOG00000043147	CPNE3 (ENSGGOG00000009601)	ENSGGOG00000014784	CNGB3 (ENSGGOG00000010075)	ENSGGOG00000010542	CNBD1 (ENSGGOG00000005268)	ENSGGOG00000041656	ENSGGOG00000042950	MMP16 (ENSGGOG00000027756)	ENSGGOG00000042581
Gorilla	MODERN SPECIES	2	KMT5B (ENSGGOG00000004122)	C11orf24 (ENSGGOG00000027226)	LRP5 (ENSGGOG00000000038)	PPP6R3 (ENSGGOG00000006609)	GAL (ENSGGOG00000000252)	TESMIN (ENSGGOG00000001666)	ENSGGOG00000001670	MRPL21 (ENSGGOG00000012124)	IGHMBP2 (ENSGGOG00000012131)	MRGPRD (ENSGGOG00000027003)	MRGPRF (ENSGGOG00000005578)	TPCN2 (ENSGGOG00000010594)	SMIM38 (ENSGGOG00000038283)	MYEOV (ENSGGOG00000014636)	ENSGGOG00000003377	ENSGGOG00000037803 #22	ENSGGOG00000002858 #23	ENSGGOG00000039153	FGF19 (ENSGGOG00000024713) #24	ENSGGOG00000040661	FGF4 (ENSGGOG00000010088) #25	FGF3 (ENSGGOG00000008854) #26	ANO1 (ENSGGOG00000013637) #27	FADD (ENSGGOG00000003989) #28	PPFIA1 (ENSGGOG00000013266) #29	ENSGGOG00000003011 #30	SHANK2 (ENSGGOG00000003019) #31	DHCR7 (ENSGGOG00000006547) #32	NADSYN1 (ENSGGOG00000006551) #33	ENSGGOG00000038292	KRTAP5-10 (ENSGGOG00000016395)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266	ENSGT00940000160995.b.e.a
Human	MODERN SPECIES	2	CHKA (ENSG00000110721)	KMT5B (ENSG00000110066)	C11orf24 (ENSG00000171067)	LRP5 (ENSG00000162337)	PPP6R3 (ENSG00000110075)	GAL (ENSG00000069482)	TESMIN (ENSG00000132749)	CPT1A (ENSG00000110090)	MRPL21 (ENSG00000197345)	IGHMBP2 (ENSG00000132740)	MRGPRD (ENSG00000172938)	MRGPRF (ENSG00000172935)	TPCN2 (ENSG00000162341)	SMIM38 (ENSG00000284713)	MYEOV (ENSG00000172927)	CCND1 (ENSG00000110092) #22	LTO1 (ENSG00000149716) #23	FGF19 (ENSG00000162344) #24	FGF4 (ENSG00000075388) #25	FGF3 (ENSG00000186895) #26	ANO1 (ENSG00000131620) #27	FADD (ENSG00000168040) #28	PPFIA1 (ENSG00000131626) #29	CTTN (ENSG00000085733) #30	SHANK2 (ENSG00000162105) #31	DHCR7 (ENSG00000172893) #32	NADSYN1 (ENSG00000172890) #33	KRTAP5-7 (ENSG00000244411)	KRTAP5-8 (ENSG00000241233)	KRTAP5-9 (ENSG00000254997)	KRTAP5-10 (ENSG00000204572)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00950000182857.a.a.b.a.r.a.a.a.a.a.a	ENSGT00910000148731	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00910000147131	ENSGT00910000144208.g.a
Chimpanzee	MODERN SPECIES	2	LRP5 (ENSPTRG00000003983)	PPP6R3 (ENSPTRG00000003984)	GAL (ENSPTRG00000003985)	TESMIN (ENSPTRG00000003986)	CPT1A (ENSPTRG00000003987)	MRPL21 (ENSPTRG00000003988)	IGHMBP2 (ENSPTRG00000003989)	MRGPRD (ENSPTRG00000003990)	MRGPRF (ENSPTRG00000003991)	TPCN2 (ENSPTRG00000003992)	SMIM38 (ENSPTRG00000049784)	MYEOV (ENSPTRG00000003994)	ENSPTRG00000044016	ENSPTRG00000046997	ENSPTRG00000051585	CCND1 (ENSPTRG00000052519) #22	ENSPTRG00000003997 #23	ENSPTRG00000049321	FGF19 (ENSPTRG00000003998) #24	ENSPTRG00000052479	FGF4 (ENSPTRG00000004000) #25	FGF3 (ENSPTRG00000004001) #26	ANO1 (ENSPTRG00000052288) #27	FADD (ENSPTRG00000004004) #28	PPFIA1 (ENSPTRG00000004005) #29	ENSPTRG00000051160	ENSPTRG00000049553 #30	ENSPTRG00000048213	ENSPTRG00000046187	SHANK2 (ENSPTRG00000004007) #31	DHCR7 (ENSPTRG00000004013) #32
Bonobo	MODERN SPECIES	2	C11orf24 (ENSPPAG00000030344)	LRP5 (ENSPPAG00000027899)	PPP6R3 (ENSPPAG00000040283)	GAL (ENSPPAG00000030688)	TESMIN (ENSPPAG00000042130)	CPT1A (ENSPPAG00000026146)	ENSPPAG00000035588	MRPL21 (ENSPPAG00000038393)	IGHMBP2 (ENSPPAG00000027355)	MRGPRD (ENSPPAG00000018331)	MRGPRF (ENSPPAG00000028148)	TPCN2 (ENSPPAG00000031099)	MYEOV (ENSPPAG00000027386)	ENSPPAG00000033657	ENSPPAG00000014303	ENSPPAG00000036375 #22	ENSPPAG00000035520 #23	ENSPPAG00000041380	FGF19 (ENSPPAG00000025447) #24	ENSPPAG00000033224	FGF3 (ENSPPAG00000041885) #26	ANO1 (ENSPPAG00000018068) #27	ENSPPAG00000034750 #28	PPFIA1 (ENSPPAG00000042805) #29	ENSPPAG00000036436	CTTN (ENSPPAG00000041298) #30	SHANK2 (ENSPPAG00000040027) #31	DHCR7 (ENSPPAG00000038909) #32	NADSYN1 (ENSPPAG00000001380) #33	ENSPPAG00000044001	ENSPPAG00000029134
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000009529.b.a	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b #32
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000009529.b.a	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33
Vervet Monkey	MODERN SPECIES		NDUFS8 (ENSCSAG00000008821)	TCIRG1 (ENSCSAG00000008911)	CHKA (ENSCSAG00000008953)	KMT5B (ENSCSAG00000008964)	ENSCSAG00000008972	LRP5 (ENSCSAG00000008983)	PPP6R3 (ENSCSAG00000009005)	GAL (ENSCSAG00000009024)	TESMIN (ENSCSAG00000009039)	CPT1A (ENSCSAG00000009054)	MRPL21 (ENSCSAG00000009065)	IGHMBP2 (ENSCSAG00000009185)	MRGPRD (ENSCSAG00000009230)	MRGPRF (ENSCSAG00000009245)	TPCN2 (ENSCSAG00000009261)	CCND1 (ENSCSAG00000009273) #22	LTO1 (ENSCSAG00000009279) #23	ENSCSAG00000018961	FGF19 (ENSCSAG00000009286) #24	FGF4 (ENSCSAG00000009298) #25	FGF3 (ENSCSAG00000009310) #26	ANO1 (ENSCSAG00000009324) #27	ENSCSAG00000009328	PPFIA1 (ENSCSAG00000009343) #29	CTTN (ENSCSAG00000009367) #30	SHANK2 (ENSCSAG00000009403) #31	DHCR7 (ENSCSAG00000009420) #32	NADSYN1 (ENSCSAG00000009433) #33	ENSCSAG00000009446	ENSCSAG00000009479	ENSCSAG00000009521
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000009529.b.a	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00960000186788	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00940000163884
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00960000186788	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266
Olive baboon	MODERN SPECIES	3	CHKA (ENSPANG00000015385)	ENSPANG00000047861	ENSPANG00000003110	C11orf24 (ENSPANG00000023334)	LRP5 (ENSPANG00000023602)	PPP6R3 (ENSPANG00000025892)	ENSPANG00000043414	TESMIN (ENSPANG00000013061)	CPT1A (ENSPANG00000020294)	MRPL21 (ENSPANG00000018811)	IGHMBP2 (ENSPANG00000023650)	MRGPRD (ENSPANG00000039940)	MRGPRF (ENSPANG00000025893)	TPCN2 (ENSPANG00000007008)	SMIM38 (ENSPANG00000032349)	CCND1 (ENSPANG00000043007) #22	ENSPANG00000008596 #23	FGF19 (ENSPANG00000042087) #24	FGF4 (ENSPANG00000019451) #25	FGF3 (ENSPANG00000023335) #26	ENSPANG00000038148	ENSPANG00000042473	ANO1 (ENSPANG00000003976) #27	FADD (ENSPANG00000023465) #28	PPFIA1 (ENSPANG00000015386) #29	CTTN (ENSPANG00000013112) #30	SHANK2 (ENSPANG00000018812) #31	ENSPANG00000044958	DHCR7 (ENSPANG00000013062) #32	NADSYN1 (ENSPANG00000011530) #33	KRTAP5-9 (ENSPANG00000031335)
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00960000186788	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00990000205266
Sooty mangabey	MODERN SPECIES	518	TCIRG1 (ENSCATG00000031312)	CHKA (ENSCATG00000041180)	KMT5B (ENSCATG00000042964)	ENSCATG00000042618	LRP5 (ENSCATG00000039241)	PPP6R3 (ENSCATG00000036683)	GAL (ENSCATG00000042505)	TESMIN (ENSCATG00000042664)	CPT1A (ENSCATG00000015860)	MRPL21 (ENSCATG00000041171)	IGHMBP2 (ENSCATG00000031229)	MRGPRD (ENSCATG00000022559)	MRGPRF (ENSCATG00000033118)	TPCN2 (ENSCATG00000041149)	MYEOV (ENSCATG00000034953)	CCND1 (ENSCATG00000040258) #22	LTO1 (ENSCATG00000039172) #23	FGF19 (ENSCATG00000038630) #24	ENSCATG00000032815	FGF4 (ENSCATG00000034644) #25	FGF3 (ENSCATG00000023721) #26	ANO1 (ENSCATG00000029714) #27	FADD (ENSCATG00000035655) #28	PPFIA1 (ENSCATG00000035769) #29	CTTN (ENSCATG00000038054) #30	ENSCATG00000041207	SHANK2 (ENSCATG00000038261) #31	DHCR7 (ENSCATG00000031848) #32	NADSYN1 (ENSCATG00000030630) #33	KRTAP5-7 (ENSCATG00000042729)	ENSCATG00000042575
Drill	MODERN SPECIES	942	NDUFS8 (ENSMLEG00000031739)	TCIRG1 (ENSMLEG00000010508)	CHKA (ENSMLEG00000043175)	KMT5B (ENSMLEG00000035508)	ENSMLEG00000038166	LRP5 (ENSMLEG00000011072)	PPP6R3 (ENSMLEG00000039058)	GAL (ENSMLEG00000028956)	TESMIN (ENSMLEG00000036701)	CPT1A (ENSMLEG00000035301)	MRPL21 (ENSMLEG00000044097)	IGHMBP2 (ENSMLEG00000043529)	MRGPRF (ENSMLEG00000029222)	TPCN2 (ENSMLEG00000042447)	MYEOV (ENSMLEG00000043368)	ENSMLEG00000040718 #22	LTO1 (ENSMLEG00000035959) #23	ENSMLEG00000042285 #24	ENSMLEG00000023931	FGF3 (ENSMLEG00000035348) #26	ANO1 (ENSMLEG00000028568) #27	FADD (ENSMLEG00000038039) #28	PPFIA1 (ENSMLEG00000040535) #29	CTTN (ENSMLEG00000003674) #30	SHANK2 (ENSMLEG00000039304) #31	ENSMLEG00000032675
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000156431	ENSGT00390000009529.b.a	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00910000147792	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00960000186788	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00940000163884
Pig-tailed macaque	MODERN SPECIES	433	CHKA (ENSMNEG00000041615)	KMT5B (ENSMNEG00000028922)	ENSMNEG00000035330	ENSMNEG00000035688	LRP5 (ENSMNEG00000044124)	PPP6R3 (ENSMNEG00000045264)	GAL (ENSMNEG00000041422)	TESMIN (ENSMNEG00000045298)	CPT1A (ENSMNEG00000037562)	MRPL21 (ENSMNEG00000036906)	ENSMNEG00000040189	IGHMBP2 (ENSMNEG00000043511)	MRGPRF (ENSMNEG00000028189)	TPCN2 (ENSMNEG00000043437)	MYEOV (ENSMNEG00000040855)	CCND1 (ENSMNEG00000040753) #22	LTO1 (ENSMNEG00000042591) #23	FGF19 (ENSMNEG00000035985) #24	ENSMNEG00000044891	FGF4 (ENSMNEG00000042206) #25	FGF3 (ENSMNEG00000044971) #26	ANO1 (ENSMNEG00000004507) #27	FADD (ENSMNEG00000038046) #28	PPFIA1 (ENSMNEG00000031136) #29	CTTN (ENSMNEG00000037757) #30	SHANK2 (ENSMNEG00000031408) #31	ENSMNEG00000032531	DHCR7 (ENSMNEG00000043442) #32	NADSYN1 (ENSMNEG00000032850) #33	ENSMNEG00000028295	ENSMNEG00000031331
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000153377.B.e	ENSGT01100000263493.a.b.a.b.a.b.a.b.a.a.a	ENSGT00940000163244.d.b.a.b.b.b.a.a	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00910000147792	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT00940000164709.a.b.b.a.b.a.a.a.a.a.a.a.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT01030000240235	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.b.a.a.b	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b #32
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000001933	TESMIN (ENSMFAG00000032724)	ENSMFAG00000054259	CPT1A (ENSMFAG00000031988)	ENSMFAG00000050046	ENSMFAG00000065150	MRPL21 (ENSMFAG00000043823)	IGHMBP2 (ENSMFAG00000043909)	ENSMFAG00000062875	ENSMFAG00000052017	MRGPRD (ENSMFAG00000065051)	MRGPRF (ENSMFAG00000031267)	TPCN2 (ENSMFAG00000045821)	ENSMFAG00000056625	ENSMFAG00000048085	CCND1 (ENSMFAG00000039013) #22	ENSMFAG00000048830	LTO1 (ENSMFAG00000063304) #23	FGF19 (ENSMFAG00000043051) #24	FGF4 (ENSMFAG00000052634) #25	FGF3 (ENSMFAG00000036070) #26	ANO1 (ENSMFAG00000000653) #27	FADD (ENSMFAG00000041718) #28	PPFIA1 (ENSMFAG00000032570) #29	CTTN (ENSMFAG00000022887) #30	ENSMFAG00000060197	SHANK2 (ENSMFAG00000031467) #31	ENSMFAG00000007500	ENSMFAG00000058717	ENSMFAG00000062361 ##31	ENSMFAG00000052327
Rhesus	MODERN SPECIES	5	C14H11orf24 (ENSMMUG00000019253)	ENSMMUG00000049489	ENSMMUG00000058610	LRP5 (ENSMMUG00000031237)	PPP6R3 (ENSMMUG00000016213)	GAL (ENSMMUG00000064140)	TESMIN (ENSMMUG00000001777)	CPT1A (ENSMMUG00000001780)	ENSMMUG00000062742	MRPL21 (ENSMMUG00000010124)	IGHMBP2 (ENSMMUG00000010128)	ENSMMUG00000051144	MRGPRD (ENSMMUG00000010129)	MRGPRF (ENSMMUG00000047446)	TPCN2 (ENSMMUG00000010784)	CCND1 (ENSMMUG00000002368) #22	ENSMMUG00000057523	ENSMMUG00000049990	LTO1 (ENSMMUG00000002369) #23	FGF19 (ENSMMUG00000053386) #24	FGF4 (ENSMMUG00000057940) #25	FGF3 (ENSMMUG00000051149) #26	ENSMMUG00000056834	ANO1 (ENSMMUG00000019734) #27	FADD (ENSMMUG00000054645) #28	PPFIA1 (ENSMMUG00000013265) #29	CTTN (ENSMMUG00000013267) #30	ENSMMUG00000052168	ENSMMUG00000061775	ENSMMUG00000064128	SHANK2 (ENSMMUG00000019736) #31
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00390000009529.b.a	ENSGT00940000153377.B.e	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00400000022774	ENSGT00940000157816 #22	ENSGT00910000147590	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00900000140979.a.a.`b.a.o.b.b	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b #32
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	100	ZMYM2 (ENSRBIG00000035593)	GJA3 (ENSRBIG00000044002)	GJB2 (ENSRBIG00000022663)	ENSRBIG00000044426	PPP6R3 (ENSRBIG00000044728)	GAL (ENSRBIG00000043331)	TESMIN (ENSRBIG00000041391)	CPT1A (ENSRBIG00000007771)	MRPL21 (ENSRBIG00000044044)	IGHMBP2 (ENSRBIG00000044249)	MRGPRF (ENSRBIG00000030308)	TPCN2 (ENSRBIG00000037035)	SMIM38 (ENSRBIG00000027460)	ENSRBIG00000029980	MYEOV (ENSRBIG00000038697)	CCND1 (ENSRBIG00000036860) #22	LTO1 (ENSRBIG00000042427) #23	ENSRBIG00000036535	FGF19 (ENSRBIG00000032547) #24	FGF4 (ENSRBIG00000010219) #25	FGF3 (ENSRBIG00000030779) #26	ANO1 (ENSRBIG00000014113) #27	FADD (ENSRBIG00000036931) #28	PPFIA1 (ENSRBIG00000000739) #29	ENSRBIG00000042884	CTTN (ENSRBIG00000039974) #30	ENSRBIG00000034203	SHANK2 (ENSRBIG00000040196) #31	ENSRBIG00000042124	ENSRBIG00000028148	DHCR7 (ENSRBIG00000013070) #32
Black snub-nosed monkey	MODERN SPECIES	55																ENSRBIG00000022878 #22
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	2322															MYEOV (ENSRROG00000045689)	CCND1 (ENSRROG00000032723) #22	ENSRROG00000032169	LTO1 (ENSRROG00000034319) #23	FGF19 (ENSRROG00000032527) #24	FGF4 (ENSRROG00000028586) #25	FGF3 (ENSRROG00000043451) #26	ANO1 (ENSRROG00000033110) #27	FADD (ENSRROG00000041037) #28	ENSRROG00000035511	PPFIA1 (ENSRROG00000040126) #29	CTTN (ENSRROG00000040322) #30	ENSRROG00000033991	ENSRROG00000045526	SHANK2 (ENSRROG00000031929) #31	DHCR7 (ENSRROG00000041957) #32	NADSYN1 (ENSRROG00000026981) #33
Golden snub-nosed monkey	MODERN SPECIES	191																ENSRROG00000037351 #22
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Tree shrew	MODERN SPECIES	336																CCND1 (ENSTBEG00000008760) #22	FGF19 (ENSTBEG00000000310) #24
Glires	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Rodentia	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Kangaroo rat	MODERN SPECIES	373	Unc93b1 (ENSDORG00000003564)	Aldh3b1 (ENSDORG00000003566)	ENSDORG00000003567	Tcirg1 (ENSDORG00000012469)	Chka (ENSDORG00000012471)	ENSDORG00000015449	Lrp5 (ENSDORG00000003026)	Ppp6r3 (ENSDORG00000015410)	ENSDORG00000013895	Cpt1a (ENSDORG00000011817)	Mrpl21 (ENSDORG00000025967)	Ighmbp2 (ENSDORG00000026350)	Mrgprd (ENSDORG00000023697)	Mrgprf (ENSDORG00000009826)	Tpcn2 (ENSDORG00000002980)	ENSDORG00000029122 #22	LTO1 (ENSDORG00000012520) #23	ENSDORG00000024888 #25	Ano1 (ENSDORG00000009084) #27	Ppfia1 (ENSDORG00000016082) #29	Cttn (ENSDORG00000009315) #30	Shank2 (ENSDORG00000011912) #31	Dhcr7 (ENSDORG00000026094) #32	Nadsyn1 (ENSDORG00000014370) #33	Mrgpre (ENSDORG00000015977)	Osbpl5 (ENSDORG00000011403)	ENSDORG00000029883	Cars (ENSDORG00000003786)	Nap1l4 (ENSDORG00000016630)	Phlda2 (ENSDORG00000016629)	Slc22a18 (ENSDORG00000027634)
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Muroidea	ANCESTRAL SPECIES	2	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Muroidea_A	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Golden Hamster	MODERN SPECIES	617	Chka (ENSMAUG00000017295)	Kmt5b (ENSMAUG00000018918)	ENSMAUG00000018025	1810055G02Rik (ENSMAUG00000017064)	Lrp5 (ENSMAUG00000018003)	Ppp6r3 (ENSMAUG00000019291)	Gal (ENSMAUG00000017428)	Tesmin (ENSMAUG00000017925)	Cpt1a (ENSMAUG00000018165)	Mrpl21 (ENSMAUG00000018243)	Ighmbp2 (ENSMAUG00000019893)	Mrgprf (ENSMAUG00000017389)	Tpcn2 (ENSMAUG00000018105)	ENSMAUG00000020083	ENSMAUG00000001942	Ccnd1 (ENSMAUG00000017636) #22	LTO1 (ENSMAUG00000018685) #23	Fgf15 (ENSMAUG00000018536) #24	ENSMAUG00000018543 #25	Fgf3 (ENSMAUG00000017622) #26	Ano1 (ENSMAUG00000020665) #27	Fadd (ENSMAUG00000017656) #28	Ppfia1 (ENSMAUG00000019398) #29	Cttn (ENSMAUG00000018999) #30	Shank2 (ENSMAUG00000020561) #31	Acte1 (ENSMAUG00000018219)	Dhcr7 (ENSMAUG00000017958) #32	Nadsyn1 (ENSMAUG00000018638) #33	Mrgpre (ENSMAUG00000019867)	Mrgprg (ENSMAUG00000002319)	Osbpl5 (ENSMAUG00000018579)
Chinese hamster chok1gshd	MODERN SPECIES	401	Tcirg1 (ENSCGRG00001015923)	Chka (ENSCGRG00001013471)	Kmt5b (ENSCGRG00001019834)	1810055G02Rik (ENSCGRG00001015629)	Lrp5 (ENSCGRG00001011999)	Ppp6r3 (ENSCGRG00001009544)	Gal (ENSCGRG00001007993)	Tesmin (ENSCGRG00001021557)	Cpt1a (ENSCGRG00001018477)	Mrpl21 (ENSCGRG00001024565)	Ighmbp2 (ENSCGRG00001019126)	Mrgprd (ENSCGRG00001015216)	Mrgprf (ENSCGRG00001021238)	Tpcn2 (ENSCGRG00001010845)	ENSCGRG00001001688	Ccnd1 (ENSCGRG00001022268) #22	LTO1 (ENSCGRG00001016809) #23	Fgf15 (ENSCGRG00001006635) #24	Fgf4 (ENSCGRG00001018014) #25	Fgf3 (ENSCGRG00001022007) #26	Ano1 (ENSCGRG00001024262) #27	Fadd (ENSCGRG00001007270) #28	Ppfia1 (ENSCGRG00001010485) #29	Cttn (ENSCGRG00001016778) #30	ENSCGRG00001012540 #31	ENSCGRG00001014608 #31	Acte1 (ENSCGRG00001020527)	Dhcr7 (ENSCGRG00001000860) #32	Nadsyn1 (ENSCGRG00001009314) #33	Mrgpre (ENSCGRG00001001111)	Mrgprg (ENSCGRG00001012867)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Prairie vole	MODERN SPECIES	16	ENSMOCG00000019842	Tcirg1 (ENSMOCG00000005946)	Chka (ENSMOCG00000007076)	Kmt5b (ENSMOCG00000015596)	1810055G02Rik (ENSMOCG00000021230)	Lrp5 (ENSMOCG00000011074)	Ppp6r3 (ENSMOCG00000020408)	Gal (ENSMOCG00000005202)	Tesmin (ENSMOCG00000003633)	Cpt1a (ENSMOCG00000014661)	Mrpl21 (ENSMOCG00000002555)	Ighmbp2 (ENSMOCG00000018939)	Mrgprf (ENSMOCG00000005355)	Tpcn2 (ENSMOCG00000013268)	ENSMOCG00000021239	Ccnd1 (ENSMOCG00000013593) #22	LTO1 (ENSMOCG00000011612) #23	Fgf15 (ENSMOCG00000020351) #24	ENSMOCG00000003096 #25	Fgf3 (ENSMOCG00000022933) #26	Ano1 (ENSMOCG00000014655) #27	Fadd (ENSMOCG00000021270) #28	Ppfia1 (ENSMOCG00000006756) #29	ENSMOCG00000008235	Cttn (ENSMOCG00000016443) #30	Shank2 (ENSMOCG00000005495) #31	Acte1 (ENSMOCG00000001514)	Dhcr7 (ENSMOCG00000011891) #32	Nadsyn1 (ENSMOCG00000015097) #33	Mrgprg (ENSMOCG00000012347)	Osbpl5 (ENSMOCG00000008055)
Northern American deer mouse	MODERN SPECIES		Tcirg1 (ENSPEMG00000007012)	Chka (ENSPEMG00000010890)	Kmt5b (ENSPEMG00000013458)	1810055G02Rik (ENSPEMG00000016140)	Lrp5 (ENSPEMG00000011601)	Ppp6r3 (ENSPEMG00000018116)	Gal (ENSPEMG00000013588)	Tesmin (ENSPEMG00000019187)	Cpt1a (ENSPEMG00000003628)	Mrpl21 (ENSPEMG00000015425)	Ighmbp2 (ENSPEMG00000017775)	Mrgprd (ENSPEMG00000004118)	Mrgprf (ENSPEMG00000025731)	Tpcn2 (ENSPEMG00000018425)	Smim38 (ENSPEMG00000019158)	Ccnd1 (ENSPEMG00000018939) #22	LTO1 (ENSPEMG00000008663) #23	ENSPEMG00000027742	Fgf15 (ENSPEMG00000008128) #24	Fgf4 (ENSPEMG00000018637) #25	Fgf3 (ENSPEMG00000030989) #26	Ano1 (ENSPEMG00000019085) #27	Fadd (ENSPEMG00000025320) #28	Ppfia1 (ENSPEMG00000009542) #29	Cttn (ENSPEMG00000012118) #30	ENSPEMG00000002175	Shank2 (ENSPEMG00000015203) #31	Acte1 (ENSPEMG00000011345)	Dhcr7 (ENSPEMG00000018376) #32	Nadsyn1 (ENSPEMG00000003580) #33	Mrgpre (ENSPEMG00000002182)
Murinae	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Mus	ANCESTRAL SPECIES		ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Mus_A	ANCESTRAL SPECIES	1												ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Mus_B	ANCESTRAL SPECIES													ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Mus_C	ANCESTRAL SPECIES	14												ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Steppe mouse	MODERN SPECIES	3396												Mrgprd (ENSMSIG00000029549)	Mrgprf (ENSMSIG00000029547)	Tpcn2 (ENSMSIG00000029535)	Smim38 (ENSMSIG00000029534)	Ccnd1 (ENSMSIG00000029529) #22	LTO1 (ENSMSIG00000029520) #23	Fgf15 (ENSMSIG00000029515) #24	Fgf4 (ENSMSIG00000029514) #25	Fgf3 (ENSMSIG00000029512) #26	ENSMSIG00000029509	Ano1 (ENSMSIG00000029432) #27	Ppfia1 (ENSMSIG00000029361) #29	Cttn (ENSMSIG00000029316) #30	Shank2 (ENSMSIG00000029202) #31	Acte1 (ENSMSIG00000029184)	Dhcr7 (ENSMSIG00000029174) #32	Nadsyn1 (ENSMSIG00000029170) #33	Mrgpre (ENSMSIG00000029169)	Mrgprg (ENSMSIG00000029167)	ENSMSIG00000029165
spretus	MODERN SPECIES	16												Mrgprd (MGP_SPRETEiJ_G0031872)	Mrgprf (MGP_SPRETEiJ_G0031871)	Tpcn2 (MGP_SPRETEiJ_G0031870)	LTO1 (MGP_SPRETEiJ_G0031869) #23	Ccnd1 (MGP_SPRETEiJ_G0031868) #22	Fgf15 (MGP_SPRETEiJ_G0031867) #24	Fgf4 (MGP_SPRETEiJ_G0031866) #25	Fgf3 (MGP_SPRETEiJ_G0031865) #26	Ano1 (MGP_SPRETEiJ_G0031864) #27	Fadd (MGP_SPRETEiJ_G0031863) #28	Ppfia1 (MGP_SPRETEiJ_G0031862) #29	Cttn (MGP_SPRETEiJ_G0031861) #30	Shank2 (MGP_SPRETEiJ_G0031860) #31	Acte1 (MGP_SPRETEiJ_G0031859)	Dhcr7 (MGP_SPRETEiJ_G0031858) #32	Nadsyn1 (MGP_SPRETEiJ_G0031857) #33	Mrgpre (MGP_SPRETEiJ_G0031856)	Mrgprg (MGP_SPRETEiJ_G0031855)	Osbpl5 (MGP_SPRETEiJ_G0031854)	Tnfrsf26 (MGP_SPRETEiJ_G0031853)
Mouse	MODERN SPECIES	16												Mrgprd (ENSMUSG00000051207)	Mrgprf (ENSMUSG00000031070)	Smim38 (ENSMUSG00000109305)	Tpcn2 (ENSMUSG00000048677)	Ccnd1 (ENSMUSG00000070348) #22	LTO1 (ENSMUSG00000031072) #23	Fgf15 (ENSMUSG00000031073) #24	Fgf4 (ENSMUSG00000050917) #25	Fgf3 (ENSMUSG00000031074) #26	Ano1 (ENSMUSG00000031075) #27	Fadd (ENSMUSG00000031077) #28	Ppfia1 (ENSMUSG00000037519) #29	Cttn (ENSMUSG00000031078) #30	Shank2 (ENSMUSG00000037541) #31	Acte1 (ENSMUSG00000031085)	Dhcr7 (ENSMUSG00000058454) #32	Nadsyn1 (ENSMUSG00000031090) #33	Mrgpre (ENSMUSG00000048965)	Mrgprg (ENSMUSG00000050276)	Osbpl5 (ENSMUSG00000037606)
Ryukyu mouse	MODERN SPECIES	16													Mrgprd (MGP_CAROLIEiJ_G0030764)	Mrgprf (MGP_CAROLIEiJ_G0030763)	Tpcn2 (MGP_CAROLIEiJ_G0030762)	Ccnd1 (MGP_CAROLIEiJ_G0030761) #22	MGP_CAROLIEiJ_G0030760 #23	Fgf15 (MGP_CAROLIEiJ_G0030759) #24	Fgf4 (MGP_CAROLIEiJ_G0030758) #25	Fgf3 (MGP_CAROLIEiJ_G0030757) #26	Ano1 (MGP_CAROLIEiJ_G0030756) #27	Fadd (MGP_CAROLIEiJ_G0030755) #28	Ppfia1 (MGP_CAROLIEiJ_G0030754) #29	Cttn (MGP_CAROLIEiJ_G0030753) #30	Shank2 (MGP_CAROLIEiJ_G0030752) #31	Acte1 (MGP_CAROLIEiJ_G0030751)	Dhcr7 (MGP_CAROLIEiJ_G0030750) #32	Nadsyn1 (MGP_CAROLIEiJ_G0030749) #33	Mrgpre (MGP_CAROLIEiJ_G0030748)	Mrgprg (MGP_CAROLIEiJ_G0030747)	Osbpl5 (MGP_CAROLIEiJ_G0030746)
Shrew mouse	MODERN SPECIES		Ndufs8 (MGP_PahariEiJ_G0013971)	Tcirg1 (MGP_PahariEiJ_G0013970)	Chka (MGP_PahariEiJ_G0013969)	Kmt5b (MGP_PahariEiJ_G0013968)	1810055G02Rik (MGP_PahariEiJ_G0013967)	Lrp5 (MGP_PahariEiJ_G0013966)	Ppp6r3 (MGP_PahariEiJ_G0013965)	MGP_PahariEiJ_G0013964	Tesmin (MGP_PahariEiJ_G0013963)	Cpt1a (MGP_PahariEiJ_G0013962)	MGP_PahariEiJ_G0013961	Ighmbp2 (MGP_PahariEiJ_G0013960)	Mrgprd (MGP_PahariEiJ_G0013959)	Mrgprf (MGP_PahariEiJ_G0013958)	Tpcn2 (MGP_PahariEiJ_G0013957)	Ccnd1 (MGP_PahariEiJ_G0013956) #22	MGP_PahariEiJ_G0013955 #23	Fgf15 (MGP_PahariEiJ_G0013954) #24	Fgf4 (MGP_PahariEiJ_G0013953) #25	Fgf3 (MGP_PahariEiJ_G0013952) #26	Ano1 (MGP_PahariEiJ_G0013951) #27	Fadd (MGP_PahariEiJ_G0013950) #28	Ppfia1 (MGP_PahariEiJ_G0013949) #29	Cttn (MGP_PahariEiJ_G0013948) #30	Shank2 (MGP_PahariEiJ_G0013947) #31	Acte1 (MGP_PahariEiJ_G0013946)	MGP_PahariEiJ_G0013945 #32	Nadsyn1 (MGP_PahariEiJ_G0013944) #33	Mrgpre (MGP_PahariEiJ_G0013943)	Mrgprg (MGP_PahariEiJ_G0013942)	Osbpl5 (MGP_PahariEiJ_G0013941)
Rat	MODERN SPECIES		Tcirg1 (ENSRNOG00000017220)	Chka (ENSRNOG00000016791)	Kmt5b (ENSRNOG00000016790)	AABR07006081.1 (ENSRNOG00000016597)	RGD1311946 (ENSRNOG00000025245)	Lrp5 (ENSRNOG00000015911)	Ppp6r3 (ENSRNOG00000015540)	Gal (ENSRNOG00000015156)	Tesmin (ENSRNOG00000014671)	Cpt1a (ENSRNOG00000014254)	Mrpl21 (ENSRNOG00000013845)	Ighmbp2 (ENSRNOG00000013456)	Mrgprd (ENSRNOG00000013448)	Mrgprf (ENSRNOG00000013426)	Tpcn2 (ENSRNOG00000013387)	Ccnd1 (ENSRNOG00000020918) #22	Lto1 (ENSRNOG00000020903) #23	Fgf19 (ENSRNOG00000020899) #24	Fgf4 (ENSRNOG00000020890) #25	Fgf3 (ENSRNOG00000020888) #26	Ano1 (ENSRNOG00000020865) #27	Fadd (ENSRNOG00000047035) #28	ENSRNOG00000029588	Ppfia1 (ENSRNOG00000020857) #29	Cttn (ENSRNOG00000050994) #30	Shank2 (ENSRNOG00000050206) #31	LOC102552318 (ENSRNOG00000059303)	Dhcr7 (ENSRNOG00000020776) #32	Nadsyn1 (ENSRNOG00000020736) #33	Mrgpre (ENSRNOG00000065330)	Mrgprg (ENSRNOG00000069807)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1708															Tpcn2 (ENSNGAG00000015900)	Ccnd1 (ENSNGAG00000023723) #22	LTO1 (ENSNGAG00000023526) #23	Fgf15 (ENSNGAG00000002055) #24	ENSNGAG00000010283 #25	Fgf3 (ENSNGAG00000006555) #26	Ano1 (ENSNGAG00000023771) #27	Fadd (ENSNGAG00000013801) #28	Ppfia1 (ENSNGAG00000013560) #29	Cttn (ENSNGAG00000010588) #30	Shank2 (ENSNGAG00000020857) #31
Lesser Egyptian jerboa	MODERN SPECIES	53															ENSJJAG00000023706	Ccnd1 (ENSJJAG00000023518) #22	LTO1 (ENSJJAG00000022000) #23	Fgf15 (ENSJJAG00000015750) #24	Fgf4 (ENSJJAG00000012092) #25	Fgf3 (ENSJJAG00000021121) #26	Ano1 (ENSJJAG00000021888) #27	Fadd (ENSJJAG00000015124) #28	Ppfia1 (ENSJJAG00000024383) #29	Cttn (ENSJJAG00000013444) #30	Shank2 (ENSJJAG00000015229) #31	Acte1 (ENSJJAG00000000416)	Dhcr7 (ENSJJAG00000017191) #32	Nadsyn1 (ENSJJAG00000012419) #33	Osbpl5 (ENSJJAG00000020113)	Cars (ENSJJAG00000022992)	Nap1l4 (ENSJJAG00000001786)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Sciuridae	ANCESTRAL SPECIES	22	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00390000006347.a
Marmotini	ANCESTRAL SPECIES	6	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00390000006347.a
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	86	NDUFS8 (ENSMMMG00000000351)	ENSMMMG00000000378	CHKA (ENSMMMG00000000678)	KMT5B (ENSMMMG00000000789)	LRP5 (ENSMMMG00000001048)	PPP6R3 (ENSMMMG00000001095)	GAL (ENSMMMG00000001246)	TESMIN (ENSMMMG00000001259)	CPT1A (ENSMMMG00000001336)	MRPL21 (ENSMMMG00000001368)	IGHMBP2 (ENSMMMG00000001381)	MRGPRD (ENSMMMG00000001512)	MRGPRF (ENSMMMG00000001519)	TPCN2 (ENSMMMG00000001627)	ENSMMMG00000003260 #22	ENSMMMG00000003262 #22	LTO1 (ENSMMMG00000003272) #23	FGF19 (ENSMMMG00000003282) #24	FGF4 (ENSMMMG00000003298) #25	FGF3 (ENSMMMG00000003325) #26	ANO1 (ENSMMMG00000003366) #27	FADD (ENSMMMG00000003409) #28	PPFIA1 (ENSMMMG00000003424) #29	CTTN (ENSMMMG00000003602) #30	SHANK2 (ENSMMMG00000003690) #31	DHCR7 (ENSMMMG00000004168) #32	NADSYN1 (ENSMMMG00000004190) #33	MRGPRG (ENSMMMG00000004231)	OSBPL5 (ENSMMMG00000004241)	CARS1 (ENSMMMG00000004312)	NAP1L4 (ENSMMMG00000004457)
Alpin marmot	MODERN SPECIES	86	ALDH3B1 (ENSMMMG00000000301)	NDUFS8 (ENSMMMG00000000351)	ENSMMMG00000000378	CHKA (ENSMMMG00000000678)	KMT5B (ENSMMMG00000000789)	LRP5 (ENSMMMG00000001048)	PPP6R3 (ENSMMMG00000001095)	GAL (ENSMMMG00000001246)	TESMIN (ENSMMMG00000001259)	CPT1A (ENSMMMG00000001336)	MRPL21 (ENSMMMG00000001368)	IGHMBP2 (ENSMMMG00000001381)	MRGPRD (ENSMMMG00000001512)	MRGPRF (ENSMMMG00000001519)	TPCN2 (ENSMMMG00000001627)	ENSMMMG00000003260 #22	ENSMMMG00000003262 #22	LTO1 (ENSMMMG00000003272) #23	FGF19 (ENSMMMG00000003282) #24	FGF4 (ENSMMMG00000003298) #25	FGF3 (ENSMMMG00000003325) #26	ANO1 (ENSMMMG00000003366) #27	FADD (ENSMMMG00000003409) #28	PPFIA1 (ENSMMMG00000003424) #29	CTTN (ENSMMMG00000003602) #30	SHANK2 (ENSMMMG00000003690) #31	DHCR7 (ENSMMMG00000004168) #32	NADSYN1 (ENSMMMG00000004190) #33	MRGPRG (ENSMMMG00000004231)	OSBPL5 (ENSMMMG00000004241)	CARS1 (ENSMMMG00000004312)
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31
Squirrel	MODERN SPECIES	199	NDUFS8 (ENSSTOG00000011500)	TCIRG1 (ENSSTOG00000024529)	CHKA (ENSSTOG00000011503)	ENSSTOG00000019647	KMT5B (ENSSTOG00000024331)	ENSSTOG00000012277	LRP5 (ENSSTOG00000012285)	PPP6R3 (ENSSTOG00000005109)	GAL (ENSSTOG00000019759)	TESMIN (ENSSTOG00000012841)	CPT1A (ENSSTOG00000012856)	MRPL21 (ENSSTOG00000032759)	IGHMBP2 (ENSSTOG00000003792)	MRGPRF (ENSSTOG00000010947)	TPCN2 (ENSSTOG00000012097)	CCND1 (ENSSTOG00000000408) #22	LTO1 (ENSSTOG00000028728) #23	FGF19 (ENSSTOG00000021758) #24	ENSSTOG00000019792 #25	FGF3 (ENSSTOG00000023034) #26	ANO1 (ENSSTOG00000026271) #27	FADD (ENSSTOG00000033252) #28	PPFIA1 (ENSSTOG00000002704) #29	CTTN (ENSSTOG00000019535) #30	SHANK2 (ENSSTOG00000020969) #31
Arctic ground squirrel	MODERN SPECIES	172	NDUFS8 (ENSUPAG00010007713)	TCIRG1 (ENSUPAG00010007691)	CHKA (ENSUPAG00010007654)	KMT5B (ENSUPAG00010007478)	ENSUPAG00010007475	LRP5 (ENSUPAG00010007453)	PPP6R3 (ENSUPAG00010007337)	ENSUPAG00010007325	CPT1A (ENSUPAG00010007209)	MRPL21 (ENSUPAG00010007189)	IGHMBP2 (ENSUPAG00010007174)	MRGPRD (ENSUPAG00010007168)	MRGPRF (ENSUPAG00010007158)	TPCN2 (ENSUPAG00010007118)	SMIM38 (ENSUPAG00010007115)	CCND1 (ENSUPAG00010007111) #22	LTO1 (ENSUPAG00010007106) #23
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005024959	ENSSVLG00005024928	ENSSVLG00005024875	LRP5 (ENSSVLG00005024864)	ENSSVLG00005024045	GAL (ENSSVLG00005023853)	TESMIN (ENSSVLG00005023772)	CPT1A (ENSSVLG00005023707)	MRPL21 (ENSSVLG00005023646)	ENSSVLG00005023637	ENSSVLG00005023620	MRGPRD (ENSSVLG00005023594)	MRGPRF (ENSSVLG00005023569)	TPCN2 (ENSSVLG00005023184)	ENSSVLG00005023121	CCND1 (ENSSVLG00005023090) #22	LTO1 (ENSSVLG00005023000) #23	FGF19 (ENSSVLG00005022961) #24	FGF4 (ENSSVLG00005022938) #25	FGF3 (ENSSVLG00005022895) #26	ANO1 (ENSSVLG00005021586) #27	ENSSVLG00005021335 #28	ENSSVLG00005021293	PPFIA1 (ENSSVLG00005020857) #29	CTTN (ENSSVLG00005020806) #30	ENSSVLG00005020779	SHANK2 (ENSSVLG00005020334) #31	ENSSVLG00005020240 ##31	DHCR7 (ENSSVLG00005020210) #32	NADSYN1 (ENSSVLG00005020150) #33	MRGPRE (ENSSVLG00005020125)
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00940000159535	ENSGT00930000151070.d.a	ENSGT00390000006347.a
Long-tailed chinchilla	MODERN SPECIES	129	NDUFS8 (ENSCLAG00000017156)	TCIRG1 (ENSCLAG00000014792)	CHKA (ENSCLAG00000014223)	KMT5B (ENSCLAG00000016628)	ENSCLAG00000017122	LRP5 (ENSCLAG00000016254)	PPP6R3 (ENSCLAG00000015508)	GAL (ENSCLAG00000016374)	TESMIN (ENSCLAG00000015628)	CPT1A (ENSCLAG00000016594)	MRPL21 (ENSCLAG00000016038)	IGHMBP2 (ENSCLAG00000015500)	MRGPRD (ENSCLAG00000016417)	MRGPRF (ENSCLAG00000016323)	TPCN2 (ENSCLAG00000016178)	CCND1 (ENSCLAG00000014981) #22	LTO1 (ENSCLAG00000014111) #23	FGF19 (ENSCLAG00000015041) #24	ENSCLAG00000014848 #25	FGF3 (ENSCLAG00000015995) #26	ANO1 (ENSCLAG00000015936) #27	FADD (ENSCLAG00000015722) #28	PPFIA1 (ENSCLAG00000015977) #29	CTTN (ENSCLAG00000016832) #30	SHANK2 (ENSCLAG00000017262) #31	ENSCLAG00000016369	DHCR7 (ENSCLAG00000015513) #32	NADSYN1 (ENSCLAG00000016090) #33	OSBPL5 (ENSCLAG00000015702)	ENSCLAG00000016141	ENSCLAG00000015017 #25
Degu	MODERN SPECIES	59	ENSODEG00000017460	C11orf24 (ENSODEG00000017396)	LRP5 (ENSODEG00000017493)	ENSODEG00000020451	PPP6R3 (ENSODEG00000017311)	GAL (ENSODEG00000017519)	TESMIN (ENSODEG00000017728)	CPT1A (ENSODEG00000017481)	MRPL21 (ENSODEG00000017369)	IGHMBP2 (ENSODEG00000017354)	MRGPRD (ENSODEG00000017313)	MRGPRF (ENSODEG00000017539)	ENSODEG00000017628	ENSODEG00000017365	TPCN2 (ENSODEG00000017370)	CCND1 (ENSODEG00000017314) #22	LTO1 (ENSODEG00000017276) #23	FGF19 (ENSODEG00000017850) #24	FGF4 (ENSODEG00000017332) #25	FGF3 (ENSODEG00000017350) #26	ENSODEG00000017320 #27	ENSODEG00000017541 #27	ENSODEG00000020446	PPFIA1 (ENSODEG00000017203) #29	CTTN (ENSODEG00000017283) #30	SHANK2 (ENSODEG00000018120) #31	ENSODEG00000017405	ENSODEG00000020450	DHCR7 (ENSODEG00000017100) #32	ENSODEG00000017514 #33	OSBPL5 (ENSODEG00000017355)
Guinea pig	MODERN SPECIES	42	NDUFS8 (ENSCPOG00000001416)	TCIRG1 (ENSCPOG00000001417)	CHKA (ENSCPOG00000022236)	KMT5B (ENSCPOG00000002147)	ENSCPOG00000000621	LRP5 (ENSCPOG00000008119)	PPP6R3 (ENSCPOG00000007353)	GAL (ENSCPOG00000004337)	TESMIN (ENSCPOG00000032989)	CPT1A (ENSCPOG00000004344)	MRPL21 (ENSCPOG00000038509)	IGHMBP2 (ENSCPOG00000007063)	MRGPRD (ENSCPOG00000025266)	MRGPRF (ENSCPOG00000033803)	TPCN2 (ENSCPOG00000002580)	CCND1 (ENSCPOG00000032886) #22	LTO1 (ENSCPOG00000031028) #23	FGF19 (ENSCPOG00000008147) #24	FGF4 (ENSCPOG00000013920) #25	FGF3 (ENSCPOG00000007355) #26	ANO1 (ENSCPOG00000011005) #27	FADD (ENSCPOG00000011290) #28	PPFIA1 (ENSCPOG00000005552) #29	CTTN (ENSCPOG00000005562) #30	SHANK2 (ENSCPOG00000009737) #31	ENSCPOG00000022995	DHCR7 (ENSCPOG00000011633) #32	NADSYN1 (ENSCPOG00000015147) #33	MRGPRE (ENSCPOG00000004420)	ENSCPOG00000002584	OSBPL5 (ENSCPOG00000015032)
Naked mole-rat female	MODERN SPECIES	14	CHKA (ENSHGLG00000014648)	KMT5B (ENSHGLG00000014467)	C11orf24 (ENSHGLG00000018642)	LRP5 (ENSHGLG00000012372)	ENSHGLG00000010435	GAL (ENSHGLG00000013095)	TESMIN (ENSHGLG00000006844)	CPT1A (ENSHGLG00000009799)	ENSHGLG00000041256	MRPL21 (ENSHGLG00000007657)	IGHMBP2 (ENSHGLG00000006468)	MRGPRD (ENSHGLG00000033970)	MRGPRF (ENSHGLG00000042564)	TPCN2 (ENSHGLG00000009786)	SMIM38 (ENSHGLG00000042963)	CCND1 (ENSHGLG00000039478) #22	ORAOV1 (ENSHGLG00000041285) #23	FGF19 (ENSHGLG00000049791) #24	FGF4 (ENSHGLG00000008219) #25	FGF3 (ENSHGLG00000006943) #26	ANO1 (ENSHGLG00000018162) #27	FADD (ENSHGLG00000038686) #28	PPFIA1 (ENSHGLG00000013241) #29	CTTN (ENSHGLG00000011727) #30	SHANK2 (ENSHGLG00000012313) #31	ENSHGLG00000046722 #31	ENSHGLG00000013700	DHCR7 (ENSHGLG00000012353) #32	NADSYN1 (ENSHGLG00000010490) #33	ENSHGLG00000042806	OSBPL5 (ENSHGLG00000009680)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.a
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Suina	ANCESTRAL SPECIES	14	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00940000159535.c	ENSGT00390000006347.a	ENSGT00940000153362.b
Pig	MODERN SPECIES	10	NDUFS8 (ENSSSCG00000037455)	TCIRG1 (ENSSSCG00000012890)	CHKA (ENSSSCG00000012889)	KMT5B (ENSSSCG00000031459)	ENSSSCG00000012886	LRP5 (ENSSSCG00000012885)	PPP6R3 (ENSSSCG00000012884)	GAL (ENSSSCG00000012883)	TESMIN (ENSSSCG00000012882)	CPT1A (ENSSSCG00000012880)	ENSSSCG00000012879	IGHMBP2 (ENSSSCG00000012878)	ENSSSCG00000042011	MRGPRF (ENSSSCG00000034441)	TPCN2 (ENSSSCG00000012875)	CCND1 (ENSSSCG00000037900) #22	LTO1 (ENSSSCG00000012874) #23	FGF19 (ENSSSCG00000012871) #24	FGF4 (ENSSSCG00000012870) #25	FGF3 (ENSSSCG00000061049) #26	ANO1 (ENSSSCG00000024158) #27	FADD (ENSSSCG00000054981) #28	PPFIA1 (ENSSSCG00000037451) #29	CTTN (ENSSSCG00000031769) #30	SHANK2 (ENSSSCG00000033043) #31	ENSSSCG00000062960 #31	ENSSSCG00000049374	DHCR7 (ENSSSCG00000021181) #32	NADSYN1 (ENSSSCG00000012859) #33	OSBPL5 (ENSSSCG00000012862)	CARS1 (ENSSSCG00000012857)
Chacoan peccary	MODERN SPECIES	921	ENSCWAG00000006537	NDUFS8 (ENSCWAG00000006464)	TCIRG1 (ENSCWAG00000006382)	CHKA (ENSCWAG00000006285)	KMT5B (ENSCWAG00000006216)	ENSCWAG00000006195	LRP5 (ENSCWAG00000006098)	PPP6R3 (ENSCWAG00000005865)	GAL (ENSCWAG00000005790)	TESMIN (ENSCWAG00000005668)	CPT1A (ENSCWAG00000005608)	MRPL21 (ENSCWAG00000005572)	IGHMBP2 (ENSCWAG00000005480)	MRGPRF (ENSCWAG00000005456)	TPCN2 (ENSCWAG00000005384)	CCND1 (ENSCWAG00000005332) #22	LTO1 (ENSCWAG00000005292) #23	FGF19 (ENSCWAG00000005256) #24	FGF4 (ENSCWAG00000005233) #25	FGF3 (ENSCWAG00000005211) #26	ANO1 (ENSCWAG00000005024) #27	FADD (ENSCWAG00000004977) #28	PPFIA1 (ENSCWAG00000004778) #29	CTTN (ENSCWAG00000004655) #30
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT01070000254034	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Pecora	ANCESTRAL SPECIES	13	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Percora_a	ANCESTRAL SPECIES	16	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Bovidae	ANCESTRAL SPECIES	16	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Caprinae	ANCESTRAL SPECIES	20	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020014508	CHKA (ENSOARG00020014607)	KMT5B (ENSOARG00020014904)	ENSOARG00020015122	LRP5 (ENSOARG00020015176)	PPP6R3 (ENSOARG00020015496)	GAL (ENSOARG00020016179)	TESMIN (ENSOARG00020016224)	CPT1A (ENSOARG00020016497)	ENSOARG00020016650	ENSOARG00020016715	IGHMBP2 (ENSOARG00020016777)	ENSOARG00020016943	MRGPRF (ENSOARG00020017039)	SMIM38 (ENSOARG00020017868)	CCND1 (ENSOARG00020018440) #22	LTO1 (ENSOARG00020018493) #23	FGF19 (ENSOARG00020018648) #24	FGF4 (ENSOARG00020018705) #25	FGF3 (ENSOARG00020018755) #26	ANO1 (ENSOARG00020018806) #27	FADD (ENSOARG00020019152) #28	ENSOARG00020019183	PPFIA1 (ENSOARG00020019227) #29	CTTN (ENSOARG00020019665) #30	SHANK2 (ENSOARG00020020051) #31	ENSOARG00020020696	DHCR7 (ENSOARG00020020761) #32	NADSYN1 (ENSOARG00020020816) #33	MRGPRG (ENSOARG00020020951)	ENSOARG00020020976
Goat	MODERN SPECIES	21	TCIRG1 (ENSCHIG00000021975)	CHKA (ENSCHIG00000014786)	KMT5B (ENSCHIG00000025585)	ENSCHIG00000016165	LRP5 (ENSCHIG00000019530)	PPP6R3 (ENSCHIG00000020367)	GAL (ENSCHIG00000024788)	TESMIN (ENSCHIG00000026439)	ENSCHIG00000019619	CPT1A (ENSCHIG00000015344)	MRPL21 (ENSCHIG00000020757)	IGHMBP2 (ENSCHIG00000011703)	ENSCHIG00000008487	MRGPRF (ENSCHIG00000024512)	TPCN2 (ENSCHIG00000024724)	CCND1 (ENSCHIG00000010534) #22	LTO1 (ENSCHIG00000016576) #23	FGF19 (ENSCHIG00000012980) #24	FGF4 (ENSCHIG00000010447) #25	FGF3 (ENSCHIG00000001606) #26	ANO1 (ENSCHIG00000025110) #27	FADD (ENSCHIG00000008257) #28	ENSCHIG00000020155	PPFIA1 (ENSCHIG00000006687) #29	CTTN (ENSCHIG00000026835) #30	SHANK2 (ENSCHIG00000023742) #31	ENSCHIG00000020525	DHCR7 (ENSCHIG00000014907) #32	NADSYN1 (ENSCHIG00000007275) #33	OSBPL5 (ENSCHIG00000024291)	ENSCHIG00000016294
Bovinae	ANCESTRAL SPECIES	24	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
American bison	DUPLICATION
American bison	MODERN SPECIES	3011	NDUFS8 (ENSBBBG00000011803)	TCIRG1 (ENSBBBG00000011829)	CHKA (ENSBBBG00000002204)	KMT5B (ENSBBBG00000011927)	ENSBBBG00000008495	LRP5 (ENSBBBG00000007211)	PPP6R3 (ENSBBBG00000002323)	GAL (ENSBBBG00000007883)	TESMIN (ENSBBBG00000012323)	CPT1A (ENSBBBG00000012354)	MRPL21 (ENSBBBG00000002340)	ENSBBBG00000012361	MRGPRD (ENSBBBG00000002343)	MRGPRF (ENSBBBG00000012368)	TPCN2 (ENSBBBG00000012427)	ENSBBBG00000002380 #22	ENSBBBG00000002382 #22	LTO1 (ENSBBBG00000012464) #23	FGF19 (ENSBBBG00000012472) #24	FGF4 (ENSBBBG00000012474) #25	ANO1 (ENSBBBG00000012506) #27	FADD (ENSBBBG00000012511) #28	ENSBBBG00000012521	PPFIA1 (ENSBBBG00000012561) #29	CTTN (ENSBBBG00000002407) #30	SHANK2 (ENSBBBG00000012602) #31	DHCR7 (ENSBBBG00000012621) #32	NADSYN1 (ENSBBBG00000006985) #33	MRGPRG (ENSBBBG00000012662)	OSBPL5 (ENSBBBG00000002460)	ENSBBBG00000012752
American bison	MODERN SPECIES	3011	TCIRG1 (ENSBBBG00000011829)	CHKA (ENSBBBG00000002204)	KMT5B (ENSBBBG00000011927)	ENSBBBG00000008495	LRP5 (ENSBBBG00000007211)	PPP6R3 (ENSBBBG00000002323)	GAL (ENSBBBG00000007883)	TESMIN (ENSBBBG00000012323)	CPT1A (ENSBBBG00000012354)	MRPL21 (ENSBBBG00000002340)	ENSBBBG00000012361	MRGPRD (ENSBBBG00000002343)	MRGPRF (ENSBBBG00000012368)	TPCN2 (ENSBBBG00000012427)	ENSBBBG00000002380 #22	ENSBBBG00000002382 #22	LTO1 (ENSBBBG00000012464) #23	FGF19 (ENSBBBG00000012472) #24	FGF4 (ENSBBBG00000012474) #25	ANO1 (ENSBBBG00000012506) #27	FADD (ENSBBBG00000012511) #28	ENSBBBG00000012521	PPFIA1 (ENSBBBG00000012561) #29	CTTN (ENSBBBG00000002407) #30	SHANK2 (ENSBBBG00000012602) #31	DHCR7 (ENSBBBG00000012621) #32	NADSYN1 (ENSBBBG00000006985) #33	MRGPRG (ENSBBBG00000012662)	OSBPL5 (ENSBBBG00000002460)	ENSBBBG00000012752	NAP1L4 (ENSBBBG00000001798)
Bos	ANCESTRAL SPECIES	11	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Bos_a	ANCESTRAL SPECIES	34	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00990000205605	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Domestic yak	MODERN SPECIES	21	CORO1B (ENSBGRG00000014832)	ENSBGRG00000014533	ENSBGRG00000014144	CDK2AP2 (ENSBGRG00000014064)	CABP2 (ENSBGRG00000013947)	ENSBGRG00000013866	ENSBGRG00000013805	NDUFV1 (ENSBGRG00000013540)	TBX10 (ENSBGRG00000013152)	ENSBGRG00000012721	ENSBGRG00000012448	ENSBGRG00000008704	ENSBGRG00000008684	ENSBGRG00000008216	ENSBGRG00000008155	CCND1 (ENSBGRG00000024441) #22	ENSBGRG00000024404	ENSBGRG00000024377 #24	FGF4 (ENSBGRG00000024355) #25	ENSBGRG00000024302 #26	FADD (ENSBGRG00000023022) #28	DHCR7 (ENSBGRG00000017928) #32	ENSBGRG00000017907 #33	ENSBGRG00000015824	ENSBGRG00000015239	ENSBGRG00000015190	ENSBGRG00000014821	ENSBGRG00000012314	ENSBGRG00000012167	INS (ENSBGRG00000010351)	ENSBGRG00000010105
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	2316	ENSBMUG00000005121	ENSBMUG00000005125	ENSBMUG00000005142	ENSBMUG00000005168	PPP6R3 (ENSBMUG00000005493)	GAL (ENSBMUG00000005636)	TESMIN (ENSBMUG00000005656)	CPT1A (ENSBMUG00000005671)	MRPL21 (ENSBMUG00000005686)	IGHMBP2 (ENSBMUG00000005704)	ENSBMUG00000005724	ENSBMUG00000005759	MRGPRF (ENSBMUG00000005775)	TPCN2 (ENSBMUG00000005793)	ENSBMUG00000005824 #22	ENSBMUG00000005837 #22	LTO1 (ENSBMUG00000005875) #23	ENSBMUG00000005895 #25	ANO1 (ENSBMUG00000005970) #27	FADD (ENSBMUG00000005994) #28	ENSBMUG00000006016	PPFIA1 (ENSBMUG00000006068) #29	CTTN (ENSBMUG00000006181) #30	ENSBMUG00000006218 #31
Wild yak	MODERN SPECIES	2316	KMT5B (ENSBMUG00000005099)	ENSBMUG00000005121	ENSBMUG00000005125	ENSBMUG00000005142	ENSBMUG00000005168	PPP6R3 (ENSBMUG00000005493)	GAL (ENSBMUG00000005636)	TESMIN (ENSBMUG00000005656)	CPT1A (ENSBMUG00000005671)	MRPL21 (ENSBMUG00000005686)	IGHMBP2 (ENSBMUG00000005704)	ENSBMUG00000005724	ENSBMUG00000005759	MRGPRF (ENSBMUG00000005775)	TPCN2 (ENSBMUG00000005793)	ENSBMUG00000005824 #22	ENSBMUG00000005837 #22	LTO1 (ENSBMUG00000005875) #23	ENSBMUG00000005895 #25	ANO1 (ENSBMUG00000005970) #27	FADD (ENSBMUG00000005994) #28	ENSBMUG00000006016	PPFIA1 (ENSBMUG00000006068) #29	CTTN (ENSBMUG00000006181) #30	ENSBMUG00000006218 #31
Bos_b	ANCESTRAL SPECIES	10	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.a.a	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT00960000191094	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005006157	KMT5B (ENSBIXG00005021706)	ENSBIXG00005021733	ENSBIXG00005021753	LRP5 (ENSBIXG00005005995)	PPP6R3 (ENSBIXG00005003728)	ENSBIXG00005022087	TESMIN (ENSBIXG00005022165)	CPT1A (ENSBIXG00005022352)	ENSBIXG00005022450	IGHMBP2 (ENSBIXG00005022495)	ENSBIXG00005022523	ENSBIXG00005022549	MRGPRF (ENSBIXG00005022567)	TPCN2 (ENSBIXG00005005450)	CCND1 (ENSBIXG00005003878) #22	LTO1 (ENSBIXG00005022702) #23	FGF19 (ENSBIXG00005022715) #24	FGF4 (ENSBIXG00005022740) #25	FGF3 (ENSBIXG00005003897) #26	ANO1 (ENSBIXG00005022912) #27	FADD (ENSBIXG00005022985) #28	ENSBIXG00005023006	PPFIA1 (ENSBIXG00005003994) #29	CTTN (ENSBIXG00005023643) #30	SHANK2 (ENSBIXG00005004100) #31	ENSBIXG00005023997	DHCR7 (ENSBIXG00005024034) #32	NADSYN1 (ENSBIXG00005024203) #33	MRGPRG (ENSBIXG00005024242)	OSBPL5 (ENSBIXG00005024555)
Cow	MODERN SPECIES	21	KMT5B (ENSBTAG00000001185)	C29H11orf24 (ENSBTAG00000004392)	LRP5 (ENSBTAG00000005903)	ENSBTAG00000011830	PPP6R3 (ENSBTAG00000009584)	GAL (ENSBTAG00000009393)	TESMIN (ENSBTAG00000053218)	CPT1A (ENSBTAG00000021999)	MRPL21 (ENSBTAG00000004348)	IGHMBP2 (ENSBTAG00000022185)	ENSBTAG00000046090	ENSBTAG00000016774	MRGPRF (ENSBTAG00000015185)	TPCN2 (ENSBTAG00000015183)	LTO1 (ENSBTAG00000011898)	CCND1 (ENSBTAG00000017514) #22	FGF19 (ENSBTAG00000017285) #24	FGF4 (ENSBTAG00000012563) #25	FGF3 (ENSBTAG00000008623) #26	ANO1 (ENSBTAG00000009997) #27	FADD (ENSBTAG00000018274) #28	ENSBTAG00000053788	PPFIA1 (ENSBTAG00000022188) #29	CTTN (ENSBTAG00000006071) #30	SHANK2 (ENSBTAG00000003171) #31	ACTE1 (ENSBTAG00000004212)	DHCR7 (ENSBTAG00000016465) #32	NADSYN1 (ENSBTAG00000016470) #33	MRGPRG (ENSBTAG00000031271)	OSBPL5 (ENSBTAG00000001077)	ENSBTAG00000039129
Siberian musk deer	MODERN SPECIES	1226	NDUFS8 (ENSMMSG00000023617)	TCIRG1 (ENSMMSG00000023600)	CHKA (ENSMMSG00000023562)	KMT5B (ENSMMSG00000023533)	ENSMMSG00000023522	LRP5 (ENSMMSG00000023500)	PPP6R3 (ENSMMSG00000023347)	GAL (ENSMMSG00000023307)	TESMIN (ENSMMSG00000023272)	CPT1A (ENSMMSG00000023241)	MRPL21 (ENSMMSG00000023225)	IGHMBP2 (ENSMMSG00000023204)	ENSMMSG00000023188	MRGPRF (ENSMMSG00000023179)	TPCN2 (ENSMMSG00000023131)	CCND1 (ENSMMSG00000023111) #22	LTO1 (ENSMMSG00000023097) #23	FGF19 (ENSMMSG00000023088) #24	FGF4 (ENSMMSG00000023082) #25	FGF3 (ENSMMSG00000023074) #26
Yarkand deer	MODERN SPECIES	11	TCIRG1 (ENSCHYG00000003734)	CHKA (ENSCHYG00000003799)	KMT5B (ENSCHYG00000003849)	ENSCHYG00000003880	LRP5 (ENSCHYG00000003897)	PPP6R3 (ENSCHYG00000003967)	GAL (ENSCHYG00000004104)	TESMIN (ENSCHYG00000004115)	CPT1A (ENSCHYG00000004136)	ENSCHYG00000004181	IGHMBP2 (ENSCHYG00000004233)	ENSCHYG00000004308	ENSCHYG00000004314	MRGPRF (ENSCHYG00000000036)	TPCN2 (ENSCHYG00000000093)	CCND1 (ENSCHYG00000000255) #22	LTO1 (ENSCHYG00000000282) #23	FGF19 (ENSCHYG00000000308) #24	FGF4 (ENSCHYG00000000320) #25	FGF3 (ENSCHYG00000000327) #26	ANO1 (ENSCHYG00000000377) #27	FADD (ENSCHYG00000000532) #28	ENSCHYG00000000547	ENSCHYG00000000552	PPFIA1 (ENSCHYG00000000593) #29	ENSCHYG00000000798 #30	SHANK2 (ENSCHYG00000000934) #31	ENSCHYG00000001247	DHCR7 (ENSCHYG00000001261) #32	NADSYN1 (ENSCHYG00000001306) #33	ENSCHYG00000001517
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426.d #23	ENSGT00390000009426.c.a.a.a #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426.d #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431.jb	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426.d #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Dolphin	MODERN SPECIES	4004																CCND1 (ENSTTRG00000017310) #22	LTO1 (ENSTTRG00000017307) #23
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431.jb	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00390000018351.n	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426.d #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Vaquita	MODERN SPECIES	19	NDUFS8 (ENSPSNG00000013024)	TCIRG1 (ENSPSNG00000013176)	CHKA (ENSPSNG00000013362)	KMT5B (ENSPSNG00000013500)	ENSPSNG00000013665	LRP5 (ENSPSNG00000013733)	PPP6R3 (ENSPSNG00000014158)	GAL (ENSPSNG00000015309)	TESMIN (ENSPSNG00000015408)	ENSPSNG00000015638	CPT1A (ENSPSNG00000015716)	MRPL21 (ENSPSNG00000015914)	IGHMBP2 (ENSPSNG00000016024)	MRGPRF (ENSPSNG00000016200)	TPCN2 (ENSPSNG00000016263)	CCND1 (ENSPSNG00000016389) #22	ENSPSNG00000016465 #23	FGF19 (ENSPSNG00000016539) #24	FGF4 (ENSPSNG00000016594) #25	ENSPSNG00000016648 #26	ANO1 (ENSPSNG00000016772) #27	FADD (ENSPSNG00000016987) #28	PPFIA1 (ENSPSNG00000017107) #29	CTTN (ENSPSNG00000017766) #30	ENSPSNG00000017888 #31	ENSPSNG00000018400 #31	DHCR7 (ENSPSNG00000018441) #32	NADSYN1 (ENSPSNG00000018498) #33	OSBPL5 (ENSPSNG00000018671)	CARS1 (ENSPSNG00000018889)	NAP1L4 (ENSPSNG00000019014)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431.jb	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00390000018351.n	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426.c.a.a.a #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Narwhal	MODERN SPECIES	314	TCIRG1 (ENSMMNG00015020611)	CHKA (ENSMMNG00015020690)	KMT5B (ENSMMNG00015020754)	ENSMMNG00015020790	LRP5 (ENSMMNG00015020832)	PPP6R3 (ENSMMNG00015020961)	GAL (ENSMMNG00015021087)	TESMIN (ENSMMNG00015021117)	GATC (ENSMMNG00015021129)	CPT1A (ENSMMNG00015021158)	MRPL21 (ENSMMNG00015021206)	IGHMBP2 (ENSMMNG00015021229)	ENSMMNG00015021257	MRGPRF (ENSMMNG00015021269)	TPCN2 (ENSMMNG00015021380)	CCND1 (ENSMMNG00015021479) #22	ENSMMNG00015021499 #23	FGF19 (ENSMMNG00015021518) #24	FGF4 (ENSMMNG00015021528) #25	ENSMMNG00015021536 #26	ANO1 (ENSMMNG00015021557) #27	FADD (ENSMMNG00015021617) #28	PPFIA1 (ENSMMNG00015016039) #29	CTTN (ENSMMNG00015016600) #30	SHANK2 (ENSMMNG00015016892) #31	DHCR7 (ENSMMNG00015017225) #32	NADSYN1 (ENSMMNG00015017289) #33	MRGPRG (ENSMMNG00015017407)	OSBPL5 (ENSMMNG00015017448)	CARS1 (ENSMMNG00015017665)	NAP1L4 (ENSMMNG00015017808)
Beluga whale	MODERN SPECIES	7	TCIRG1 (ENSDLEG00000007283)	CHKA (ENSDLEG00000007265)	KMT5B (ENSDLEG00000007251)	ENSDLEG00000007238	LRP5 (ENSDLEG00000006885)	PPP6R3 (ENSDLEG00000006813)	GAL (ENSDLEG00000006803)	ENSDLEG00000006799	TESMIN (ENSDLEG00000006791)	CPT1A (ENSDLEG00000006719)	MRPL21 (ENSDLEG00000006686)	IGHMBP2 (ENSDLEG00000006566)	ENSDLEG00000006544	MRGPRF (ENSDLEG00000006538)	TPCN2 (ENSDLEG00000006495)	CCND1 (ENSDLEG00000006485) #22	ENSDLEG00000006473	ENSDLEG00000006464 #24	FGF4 (ENSDLEG00000006458) #25	FGF3 (ENSDLEG00000006451) #26	ANO1 (ENSDLEG00000006391) #27	ENSDLEG00000006384 #28	PPFIA1 (ENSDLEG00000006322) #29	CTTN (ENSDLEG00000006293) #30	SHANK2 (ENSDLEG00000006237) #31	DHCR7 (ENSDLEG00000006218) #32	NADSYN1 (ENSDLEG00000006200) #33	MRGPRG (ENSDLEG00000006188)	OSBPL5 (ENSDLEG00000006170)	ENSDLEG00000006166	CARS1 (ENSDLEG00000006156)
Sperm whale	MODERN SPECIES	9											SMIM38 (ENSPCTG00005012013)	TPCN2 (ENSPCTG00005012033)	MRGPRF (ENSPCTG00005012133)	IGHMBP2 (ENSPCTG00005012180)	MRPL21 (ENSPCTG00005012277)	CCND1 (ENSPCTG00005012304) #22	LTO1 (ENSPCTG00005012359) #23	FGF19 (ENSPCTG00005012534) #24	FGF4 (ENSPCTG00005012579) #25	FGF3 (ENSPCTG00005012631) #26	ANO1 (ENSPCTG00005012731) #27	ENSPCTG00005012992 #28	ENSPCTG00005013014 #28	PPFIA1 (ENSPCTG00005013091) #29	CTTN (ENSPCTG00005013533) #30	SHANK2 (ENSPCTG00005014075) #31	DHCR7 (ENSPCTG00005015137) #32	NADSYN1 (ENSPCTG00005015196) #33	MRGPRG (ENSPCTG00005015332)	OSBPL5 (ENSPCTG00005015374)	ENSPCTG00005015621
Blue whale	MODERN SPECIES	19	UNC93B1 (ENSBMSG00010004898)	ALDH3B1 (ENSBMSG00010004922)	NDUFS8 (ENSBMSG00010004952)	CHKA (ENSBMSG00010004966)	KMT5B (ENSBMSG00010004978)	ENSBMSG00010004983	LRP5 (ENSBMSG00010004990)	PPP6R3 (ENSBMSG00010005022)	GAL (ENSBMSG00010005047)	CPT1A (ENSBMSG00010005084)	ENSBMSG00010005133	MRPL21 (ENSBMSG00010005141)	IGHMBP2 (ENSBMSG00010005154)	MRGPRF (ENSBMSG00010005176)	TPCN2 (ENSBMSG00010005216)	CCND1 (ENSBMSG00010005276) #22	ENSBMSG00010005297 #23	FGF19 (ENSBMSG00010005311) #24	FGF4 (ENSBMSG00010005321) #25	FGF3 (ENSBMSG00010005331) #26	ANO1 (ENSBMSG00010005353) #27	FADD (ENSBMSG00010005386) #28	PPFIA1 (ENSBMSG00010005441) #29	CTTN (ENSBMSG00010005521) #30	SHANK2 (ENSBMSG00010005601) #31	DHCR7 (ENSBMSG00010005765) #32	NADSYN1 (ENSBMSG00010005789) #33	OSBPL5 (ENSBMSG00010005841)	ENSBMSG00010005900	CARS1 (ENSBMSG00010006110)	NAP1L4 (ENSBMSG00010006393)
Camelidae	ANCESTRAL SPECIES	18	ENSGT00940000162915	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Arabian camel	MODERN SPECIES	1	ALDH3B1 (ENSCDRG00005009325)	NDUFS8 (ENSCDRG00005009196)	TCIRG1 (ENSCDRG00005009035)	CHKA (ENSCDRG00005008677)	KMT5B (ENSCDRG00005008575)	ENSCDRG00005008524	ENSCDRG00005008491	PPP6R3 (ENSCDRG00005007732)	GAL (ENSCDRG00005007648)	TESMIN (ENSCDRG00005007444)	CPT1A (ENSCDRG00005007333)	MRPL21 (ENSCDRG00005007269)	IGHMBP2 (ENSCDRG00005007128)	MRGPRF (ENSCDRG00005007035)	TPCN2 (ENSCDRG00005006714)	CCND1 (ENSCDRG00005006610) #22	LTO1 (ENSCDRG00005021470) #23	FGF19 (ENSCDRG00005021465) #24	FGF4 (ENSCDRG00005021463) #25	ENSCDRG00005021451 #26	ANO1 (ENSCDRG00005021443) #27	FADD (ENSCDRG00005021431) #28	PPFIA1 (ENSCDRG00005021405) #29	CTTN (ENSCDRG00005021382) #30	ENSCDRG00005021368 #31	ENSCDRG00005021363 #31	ENSCDRG00005021359 #31	ENSCDRG00005021353	DHCR7 (ENSCDRG00005021350) #32	NADSYN1 (ENSCDRG00005021345) #33	ENSCDRG00005021343
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00950000185387	ENSGT00940000159535	ENSGT00930000151070.d.a
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b
Greater horseshoe bat	MODERN SPECIES	2	NDUFS8 (ENSRFEG00010021301)	TCIRG1 (ENSRFEG00010021289)	CHKA (ENSRFEG00010021236)	KMT5B (ENSRFEG00010021206)	ENSRFEG00010021193	LRP5 (ENSRFEG00010021140)	PPP6R3 (ENSRFEG00010021009)	GAL (ENSRFEG00010020955)	TESMIN (ENSRFEG00010020904)	CPT1A (ENSRFEG00010020866)	MRPL21 (ENSRFEG00010020842)	IGHMBP2 (ENSRFEG00010020811)	ENSRFEG00010020788	MRGPRF (ENSRFEG00010020778)	TPCN2 (ENSRFEG00010020715)	CCND1 (ENSRFEG00010020663) #22	LTO1 (ENSRFEG00010020618) #23	FGF19 (ENSRFEG00010020594) #24	FGF4 (ENSRFEG00010020567) #25	FGF3 (ENSRFEG00010020546) #26	ANO1 (ENSRFEG00010020393) #27	FADD (ENSRFEG00010020342) #28	PPFIA1 (ENSRFEG00010020279) #29	CTTN (ENSRFEG00010020070) #30	SHANK2 (ENSRFEG00010019833) #31	DHCR7 (ENSRFEG00010019782) #32	NADSYN1 (ENSRFEG00010019709) #33	ENSRFEG00010019689	MRGPRG (ENSRFEG00010019682)	ENSRFEG00010019667	ENSRFEG00010019649
Microbat	MODERN SPECIES	1155														MRGPRD (ENSMLUG00000008974)	TPCN2 (ENSMLUG00000000099)	CCND1 (ENSMLUG00000011181) #22	LTO1 (ENSMLUG00000011236) #23	FGF19 (ENSMLUG00000002512) #24	FGF4 (ENSMLUG00000009916) #25	FGF3 (ENSMLUG00000016503) #26	PPFIA1 (ENSMLUG00000001700) #29	BRSK2 (ENSMLUG00000016128)	PRRG4 (ENSMLUG00000010470)	QSER1 (ENSMLUG00000010482)	DEPDC7 (ENSMLUG00000003052)	TCP11L1 (ENSMLUG00000003062)	ENSMLUG00000003073	HIPK3 (ENSMLUG00000014987)	KIAA1549L (ENSMLUG00000014997)	C11orf91 (ENSMLUG00000013619)	ENSMLUG00000013131
Megabat	MODERN SPECIES	3985																CCND1 (ENSPVAG00000016173) #22	LTO1 (ENSPVAG00000016178) #23
Equus	ANCESTRAL SPECIES	11	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.d	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a	ENSGT00940000160892
Donkey	MODERN SPECIES	21	KMT5B (ENSEASG00005006021)	ENSEASG00005036637	LRP5 (ENSEASG00005006074)	PPP6R3 (ENSEASG00005006224)	GAL (ENSEASG00005007730)	TESMIN (ENSEASG00005007731)	CPT1A (ENSEASG00005007732)	ENSEASG00005007733	ENSEASG00005032095	ENSEASG00005007740	IGHMBP2 (ENSEASG00005007735)	MRGPRF (ENSEASG00005007743)	TPCN2 (ENSEASG00005007747)	SMIM38 (ENSEASG00005030431)	ENSEASG00005029364	CCND1 (ENSEASG00005007754) #22	LTO1 (ENSEASG00005028684) #23	FGF19 (ENSEASG00005034459) #24	FGF4 (ENSEASG00005007763) #25	FGF3 (ENSEASG00005025286) #26	ANO1 (ENSEASG00005007772) #27	FADD (ENSEASG00005026333) #28	ENSEASG00005032237 #29
Horse	MODERN SPECIES	3	NDUFS8 (ENSECAG00000010175)	TCIRG1 (ENSECAG00000010196)	CHKA (ENSECAG00000011539)	KMT5B (ENSECAG00000012952)	C12H11orf24 (ENSECAG00000028930)	LRP5 (ENSECAG00000013180)	PPP6R3 (ENSECAG00000015322)	GAL (ENSECAG00000016579)	CPT1A (ENSECAG00000016852)	MRPL21 (ENSECAG00000019258)	IGHMBP2 (ENSECAG00000019360)	ENSECAG00000035247	ENSECAG00000019576	MRGPRF (ENSECAG00000019588)	TPCN2 (ENSECAG00000019619)	CCND1 (ENSECAG00000038536) #22	LTO1 (ENSECAG00000020265) #23	FGF19 (ENSECAG00000036646) #24	FGF4 (ENSECAG00000031103) #25	FGF3 (ENSECAG00000031321) #26	ANO1 (ENSECAG00000020314) #27	FADD (ENSECAG00000021437) #28	PPFIA1 (ENSECAG00000026889) #29	CTTN (ENSECAG00000021450) #30	SHANK2 (ENSECAG00000022208) #31	ACTE1 (ENSECAG00000023320)	DHCR7 (ENSECAG00000023341) #32	NADSYN1 (ENSECAG00000023476) #33	ENSECAG00000031265	ENSECAG00000041951	ENSECAG00000037254
Carnivora	ANCESTRAL SPECIES	7	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Caniformia	ANCESTRAL SPECIES	21	ENSGT00390000003049.f	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00390000003049.f	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000003049.f	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152.q #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b
Ferret	MODERN SPECIES	233	TCIRG1 (ENSMPUG00000004236)	CHKA (ENSMPUG00000004254)	KMT5B (ENSMPUG00000004326)	ENSMPUG00000004339	LRP5 (ENSMPUG00000004345)	PPP6R3 (ENSMPUG00000004357)	GAL (ENSMPUG00000004372)	TESMIN (ENSMPUG00000004382)	CPT1A (ENSMPUG00000004418)	MRPL21 (ENSMPUG00000004430)	IGHMBP2 (ENSMPUG00000004439)	MRGPRD (ENSMPUG00000004515)	MRGPRF (ENSMPUG00000004529)	TPCN2 (ENSMPUG00000004534)	ENSMPUG00000004558	CCND1 (ENSMPUG00000004567) #22	FGF19 (ENSMPUG00000004606) #24	FGF4 (ENSMPUG00000004613) #25	ENSMPUG00000004643 #26	ENSMPUG00000004650	ENSMPUG00000004659	ENSMPUG00000019030	ENSMPUG00000004664	ENSMPUG00000004671	ENSMPUG00000004677	ANO1 (ENSMPUG00000004681) #27	FADD (ENSMPUG00000004702) #28	ENSMPUG00000004709	PPFIA1 (ENSMPUG00000004719) #29	ENSMPUG00000004738	CTTN (ENSMPUG00000004744) #30
American mink	MODERN SPECIES	104	ENSNVIG00000012648	ENSNVIG00000012636	CHKA (ENSNVIG00000012580)	KMT5B (ENSNVIG00000012483)	ENSNVIG00000012467	LRP5 (ENSNVIG00000012415)	PPP6R3 (ENSNVIG00000011985)	ENSNVIG00000011907	TESMIN (ENSNVIG00000011879)	CPT1A (ENSNVIG00000011801)	MRPL21 (ENSNVIG00000011766)	IGHMBP2 (ENSNVIG00000011737)	MRGPRD (ENSNVIG00000011721)	MRGPRF (ENSNVIG00000011699)	TPCN2 (ENSNVIG00000011621)	ENSNVIG00000011596 #22	LTO1 (ENSNVIG00000011554) #23	FGF19 (ENSNVIG00000011538) #24	FGF4 (ENSNVIG00000011535) #25	FGF3 (ENSNVIG00000011528) #26	ANO1 (ENSNVIG00000011432) #27	FADD (ENSNVIG00000011423) #28	PPFIA1 (ENSNVIG00000010291) #29	CTTN (ENSNVIG00000010121) #30	SHANK2 (ENSNVIG00000009980) #31	DHCR7 (ENSNVIG00000009959) #32	ENSNVIG00000009952 #33	ENSNVIG00000009913 #33
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000003049.f	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00950000185387	ENSGT00940000159535	ENSGT00930000151070.d.b
Giant Panda	MODERN SPECIES	7	NDUFS8 (ENSAMEG00000001217)	TCIRG1 (ENSAMEG00000001230)	CHKA (ENSAMEG00000001272)	KMT5B (ENSAMEG00000001298)	ENSAMEG00000030515	LRP5 (ENSAMEG00000001320)	PPP6R3 (ENSAMEG00000008694)	GAL (ENSAMEG00000008690)	TESMIN (ENSAMEG00000008676)	CPT1A (ENSAMEG00000008595)	ENSAMEG00000008591	IGHMBP2 (ENSAMEG00000008568)	MRGPRD (ENSAMEG00000027443)	MRGPRF (ENSAMEG00000001626)	TPCN2 (ENSAMEG00000001559)	ENSAMEG00000001950 #22	ENSAMEG00000001983 #23	FGF19 (ENSAMEG00000029958) #24	FGF4 (ENSAMEG00000001992) #25	ENSAMEG00000025861 #26	ENSAMEG00000026287 #26	ANO1 (ENSAMEG00000007119) #27	FADD (ENSAMEG00000007199) #28	PPFIA1 (ENSAMEG00000007203) #29	CTTN (ENSAMEG00000007350) #30	SHANK2 (ENSAMEG00000007430) #31	DHCR7 (ENSAMEG00000007479) #32	ENSAMEG00000007497 #33	ENSAMEG00000019931	ENSAMEG00000007369	CARS1 (ENSAMEG00000005710)
Ursus	ANCESTRAL SPECIES	59														ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT00950000185387	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b
American black bear	MODERN SPECIES	103														MRGPRF (ENSUAMG00000024797)	TPCN2 (ENSUAMG00000024798)	CCND1 (ENSUAMG00000024831) #22	LTO1 (ENSUAMG00000024832) #23	FGF19 (ENSUAMG00000024834) #24	FGF4 (ENSUAMG00000024835) #25	FGF3 (ENSUAMG00000024836) #26
Polar bear	MODERN SPECIES	221														MRGPRF (ENSUMAG00000007349)	TPCN2 (ENSUMAG00000007334)	ENSUMAG00000007327 #22	LTO1 (ENSUMAG00000007312) #23	FGF19 (ENSUMAG00000007302) #24	ENSUMAG00000007295 #25	ANO1 (ENSUMAG00000007174) #27	ENSUMAG00000007134	PPFIA1 (ENSUMAG00000007084) #29	CTTN (ENSUMAG00000007071) #30	ENSUMAG00000007048 #31	ENSUMAG00000007026 #31	DHCR7 (ENSUMAG00000007009) #32	ENSUMAG00000007007 #33	ENSUMAG00000007000 #33	ENSUMAG00000006998	OSBPL5 (ENSUMAG00000006967)	ENSUMAG00000006941
Canidae	ANCESTRAL SPECIES	13	ENSGT00390000003049.e.b	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535.d	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00390000003049.e.b	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535.c	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b.c	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00940000163884	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535	ENSGT00930000151070.d.b
Dog	MODERN SPECIES	9	TCIRG1 (ENSCAFG00845008465)	CHKA (ENSCAFG00845008304)	KMT5B (ENSCAFG00845008157)	ENSCAFG00845008076	LRP5 (ENSCAFG00845007778)	PPP6R3 (ENSCAFG00845007185)	GAL (ENSCAFG00845006857)	ENSCAFG00845006839	ENSCAFG00845006803	CPT1A (ENSCAFG00845006637)	ENSCAFG00845006503	IGHMBP2 (ENSCAFG00845006112)	MRGPRD (ENSCAFG00845006017)	MRGPRF (ENSCAFG00845005992)	TPCN2 (ENSCAFG00845005889)	CCND1 (ENSCAFG00845015348) #22	ENSCAFG00845015244 #23	FGF19 (ENSCAFG00845015136) #24	FGF4 (ENSCAFG00845015112) #25	FGF3 (ENSCAFG00845015080) #26	ANO1 (ENSCAFG00845014688) #27	FADD (ENSCAFG00845014582) #28	PPFIA1 (ENSCAFG00845014251) #29	CTTN (ENSCAFG00845013798) #30	SHANK2 (ENSCAFG00845013433) #31	ENSCAFG00845013273	DHCR7 (ENSCAFG00845013203) #32	NADSYN1 (ENSCAFG00845012869) #33	MRGPRG (ENSCAFG00845012762)	OSBPL5 (ENSCAFG00845012537)	ENSCAFG00845012415
Dingo	MODERN SPECIES	69												IGHMBP2 (ENSCAFG00020015362)	MRGPRD (ENSCAFG00020015370)	MRGPRF (ENSCAFG00020015373)	TPCN2 (ENSCAFG00020015381)	CCND1 (ENSCAFG00020015396) #22	ENSCAFG00020015398 #23	FGF19 (ENSCAFG00020015401) #24	FGF4 (ENSCAFG00020015404) #25	FGF3 (ENSCAFG00020015407) #26	ANO1 (ENSCAFG00020015410) #27	FADD (ENSCAFG00020015414) #28	PPFIA1 (ENSCAFG00020015449) #29	CTTN (ENSCAFG00020016827) #30	SHANK2 (ENSCAFG00020016842) #31	DHCR7 (ENSCAFG00020016903) #32	NADSYN1 (ENSCAFG00020016999) #33	MRGPRG (ENSCAFG00020017170)	OSBPL5 (ENSCAFG00020017174)	ENSCAFG00020017184	CARS1 (ENSCAFG00020017188)
Red fox	MODERN SPECIES	49	ENSVVUG00000010174	TCIRG1 (ENSVVUG00000010160)	CHKA (ENSVVUG00000010123)	ENSVVUG00000010120	KMT5B (ENSVVUG00000010104)	CUNH11orf24 (ENSVVUG00000010101)	LRP5 (ENSVVUG00000005065)	PPP6R3 (ENSVVUG00000004914)	ENSVVUG00000004883	TESMIN (ENSVVUG00000004876)	CPT1A (ENSVVUG00000004839)	ENSVVUG00000004820	IGHMBP2 (ENSVVUG00000004811)	MRGPRF (ENSVVUG00000004804)	TPCN2 (ENSVVUG00000004753)	CCND1 (ENSVVUG00000004739) #22	ENSVVUG00000004719 #23	ENSVVUG00000004714	FGF19 (ENSVVUG00000004712) #24	FGF4 (ENSVVUG00000004705) #25	FGF3 (ENSVVUG00000004701) #26	ANO1 (ENSVVUG00000004627) #27	FADD (ENSVVUG00000004618) #28	PPFIA1 (ENSVVUG00000004563) #29	CTTN (ENSVVUG00000004541) #30	SHANK2 (ENSVVUG00000003559) #31	ENSVVUG00000003507	DHCR7 (ENSVVUG00000003503) #32	NADSYN1 (ENSVVUG00000003498) #33	ENSVVUG00000003496	MRGPRG (ENSVVUG00000003491)
Felidae	ANCESTRAL SPECIES		ENSGT00940000155904.e.a	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Cat	MODERN SPECIES	241	TCIRG1 (ENSFCAG00000002995)	CHKA (ENSFCAG00000006219)	KMT5B (ENSFCAG00000009067)	ENSFCAG00000042941	LRP5 (ENSFCAG00000012666)	PPP6R3 (ENSFCAG00000005076)	GAL (ENSFCAG00000023993)	TESMIN (ENSFCAG00000025862)	CPT1A (ENSFCAG00000028060)	MRPL21 (ENSFCAG00000005779)	ENSFCAG00000049624	IGHMBP2 (ENSFCAG00000010879)	ENSFCAG00000052440	MRGPRF (ENSFCAG00000010885)	TPCN2 (ENSFCAG00000002792)	CCND1 (ENSFCAG00000008358) #22	LTO1 (ENSFCAG00000026606) #23	FGF19 (ENSFCAG00000027163) #24	FGF4 (ENSFCAG00000036639) #25	FGF3 (ENSFCAG00000043034) #26	ANO1 (ENSFCAG00000006735) #27	FADD (ENSFCAG00000042813) #28	PPFIA1 (ENSFCAG00000004765) #29	CTTN (ENSFCAG00000004767) #30	SHANK2 (ENSFCAG00000004768) #31	ENSFCAG00000050075	ENSFCAG00000050101	ENSFCAG00000031056	DHCR7 (ENSFCAG00000004115) #32	NADSYN1 (ENSFCAG00000004116) #33	OSBPL5 (ENSFCAG00000006947)
Panthera	ANCESTRAL SPECIES	18	ENSGT00940000155904.e.a	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00940000155904.e.a	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535	ENSGT00930000151070.d.b	ENSGT00390000006347.a
leopard	MODERN SPECIES	64	NDUFS8 (ENSPPRG00000004781)	ENSPPRG00000004705	ENSPPRG00000004626	CHKA (ENSPPRG00000003923)	KMT5B (ENSPPRG00000002092)	ENSPPRG00000001623	LRP5 (ENSPPRG00000001607)	PPP6R3 (ENSPPRG00000000661)	GAL (ENSPPRG00000023433)	TESMIN (ENSPPRG00000023616)	CPT1A (ENSPPRG00000023904)	MRPL21 (ENSPPRG00000024109)	IGHMBP2 (ENSPPRG00000024194)	MRGPRF (ENSPPRG00000024308)	TPCN2 (ENSPPRG00000024406)	CCND1 (ENSPPRG00000024642) #22	LTO1 (ENSPPRG00000024675) #23	FGF19 (ENSPPRG00000024723) #24	FGF4 (ENSPPRG00000024731) #25	FGF3 (ENSPPRG00000024743) #26	ANO1 (ENSPPRG00000024762) #27	FADD (ENSPPRG00000024863) #28	PPFIA1 (ENSPPRG00000024878) #29	CTTN (ENSPPRG00000024935) #30	SHANK2 (ENSPPRG00000024978) #31	DHCR7 (ENSPPRG00000025025) #32	NADSYN1 (ENSPPRG00000025032) #33	OSBPL5 (ENSPPRG00000025061)	CARS1 (ENSPPRG00000022117)	ENSPPRG00000020522	NAP1L4 (ENSPPRG00000018679)
lion	MODERN SPECIES	56					KMT5B (ENSPLOG00000016932)	ENSPLOG00000017350	LRP5 (ENSPLOG00000017371)	PPP6R3 (ENSPLOG00000017745)	GAL (ENSPLOG00000019206)	TESMIN (ENSPLOG00000019256)	CPT1A (ENSPLOG00000019396)	ENSPLOG00000019447	IGHMBP2 (ENSPLOG00000019507)	MRGPRF (ENSPLOG00000019791)	TPCN2 (ENSPLOG00000019933)	CCND1 (ENSPLOG00000020328) #22	LTO1 (ENSPLOG00000020370) #23	FGF19 (ENSPLOG00000020417) #24	FGF4 (ENSPLOG00000020437) #25	FGF3 (ENSPLOG00000020465) #26
Tiger	MODERN SPECIES	461	ENSPTIG00000008967	ALDH3B1 (ENSPTIG00000003636)	NDUFS8 (ENSPTIG00000020944)	ENSPTIG00000020468	CHKA (ENSPTIG00000017888)	ENSPTIG00000014475	ENSPTIG00000013831	LRP5 (ENSPTIG00000009714)	PPP6R3 (ENSPTIG00000015409)	TESMIN (ENSPTIG00000011695)	CPT1A (ENSPTIG00000005864)	MRPL21 (ENSPTIG00000000955)	ENSPTIG00000020123	MRGPRF (ENSPTIG00000019368)	TPCN2 (ENSPTIG00000013302)	ENSPTIG00000012911 #22	LTO1 (ENSPTIG00000008634) #23	FGF19 (ENSPTIG00000007495) #24	ANO1 (ENSPTIG00000021763) #27	ENSPTIG00000007413 #28	PPFIA1 (ENSPTIG00000016893) #29	CTTN (ENSPTIG00000013925) #30
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31
Xenarthra	ANCESTRAL SPECIES	645																ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29
Armadillo	MODERN SPECIES	1642																CCND1 (ENSDNOG00000041164) #22	ENSDNOG00000012323 #23	FGF19 (ENSDNOG00000032646) #24	FGF4 (ENSDNOG00000036269) #25	ENSDNOG00000013431 #26	ANO1 (ENSDNOG00000042488) #27	FADD (ENSDNOG00000003249) #28	PPFIA1 (ENSDNOG00000005382) #29	ENSDNOG00000048894	CTTN (ENSDNOG00000019508) #30
Sloth	MODERN SPECIES	1018																ENSCHOG00000007162 #22
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00940000170720	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25
Elephant	MODERN SPECIES	532	TCIRG1 (ENSLAFG00000009983)	CHKA (ENSLAFG00000009985)	KMT5B (ENSLAFG00000006490)	ENSLAFG00000006321	LRP5 (ENSLAFG00000008300)	PPP6R3 (ENSLAFG00000008701)	ENSLAFG00000013266	TESMIN (ENSLAFG00000008438)	CPT1A (ENSLAFG00000018211)	MRPL21 (ENSLAFG00000003336)	ENSLAFG00000025815	IGHMBP2 (ENSLAFG00000022445)	MRGPRD (ENSLAFG00000010061)	MRGPRF (ENSLAFG00000007732)	ENSLAFG00000007978	CCND1 (ENSLAFG00000007682) #22	LTO1 (ENSLAFG00000022073) #23	ENSLAFG00000029807 #24	FGF4 (ENSLAFG00000025574) #25
Hyrax	MODERN SPECIES	9682																CCND1 (ENSPCAG00000001048) #22
Tenrec	MODERN SPECIES	1234																ENSETEG00000002870 #22
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b
Opossum	DUPLICATION
Opossum	MODERN SPECIES	4	NADSYN1 (ENSMODG00000007384) #33	ENSMODG00000007394	GAL (ENSMODG00000012764)	TESMIN (ENSMODG00000003549)	ENSMODG00000003995	ENSMODG00000046302	MRPL21 (ENSMODG00000045992)	IGHMBP2 (ENSMODG00000004040)	ENSMODG00000004049	MRGPRF (ENSMODG00000004054)	ENSMODG00000047370	ENSMODG00000004073	ENSMODG00000029429	ENSMODG00000049009	ENSMODG00000038046 #22	ENSMODG00000004080 #22	LTO1 (ENSMODG00000004085) #23	FGF19 (ENSMODG00000004093) #24	FGF4 (ENSMODG00000004108) #25	ENSMODG00000051588	FGF3 (ENSMODG00000004114) #26
Opossum	MODERN SPECIES	4	ENSMODG00000007370	NADSYN1 (ENSMODG00000007384) #33	ENSMODG00000007394	GAL (ENSMODG00000012764)	TESMIN (ENSMODG00000003549)	ENSMODG00000003995	ENSMODG00000046302	MRPL21 (ENSMODG00000045992)	IGHMBP2 (ENSMODG00000004040)	ENSMODG00000004049	MRGPRF (ENSMODG00000004054)	ENSMODG00000047370	ENSMODG00000004073	ENSMODG00000029429	ENSMODG00000049009	ENSMODG00000038046 #22	ENSMODG00000004080 #22	LTO1 (ENSMODG00000004085) #23	FGF19 (ENSMODG00000004093) #24	FGF4 (ENSMODG00000004108) #25	ENSMODG00000051588	FGF3 (ENSMODG00000004114) #26
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b
Diprotodontia	ANCESTRAL SPECIES	27	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b.e	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152 #33	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00390000003049	ENSGT00950000182881.a.b.a.b	ENSGT00950000182939.a.b.b.e	ENSGT00940000156431	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00390000009663	ENSGT00940000161379	ENSGT01060000248595.b.a.b.a	ENSGT00390000005535	ENSGT00930000151035.a	ENSGT01030000234639.A.b.a.b.b	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816 #22	ENSGT00390000009426 #23	ENSGT00940000160601 #24	ENSGT00940000158825 #25	ENSGT00940000161128 #26	ENSGT00940000157182 #27	ENSGT00390000002105 #28	ENSGT01050000244900.a.a.b #29	ENSGT00940000158565 #30	ENSGT00940000153561.b.a.a.b #31	ENSGT00390000000417.a.b #32	ENSGT00390000010152.m #33	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.b.f	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a
Common wonbat	MODERN SPECIES	714	NDUFS8 (ENSVURG00010024656)	TCIRG1 (ENSVURG00010024654)	CHKA (ENSVURG00010024636)	KMT5B (ENSVURG00010024629)	ENSVURG00010024627	ENSVURG00010024625	PPP6R3 (ENSVURG00010024623)	ENSVURG00010024620	TESMIN (ENSVURG00010024616)	CPT1A (ENSVURG00010024607)	ENSVURG00010024596	IGHMBP2 (ENSVURG00010024593)	ENSVURG00010024590	MRGPRF (ENSVURG00010024588)	TPCN2 (ENSVURG00010024582)	CCND1 (ENSVURG00010024576) #22	LTO1 (ENSVURG00010024575) #23	FGF19 (ENSVURG00010024573) #24	FGF4 (ENSVURG00010024570) #25	FGF3 (ENSVURG00010024564) #26	ANO1 (ENSVURG00010024551) #27	ENSVURG00010024549 #28	PPFIA1 (ENSVURG00010024528) #29	CTTN (ENSVURG00010024517) #30	SHANK2 (ENSVURG00010024503) #31	DHCR7 (ENSVURG00010024484) #32	ENSVURG00010024475 #33
koala	MODERN SPECIES	209										ENSPCIG00000011060	IGHMBP2 (ENSPCIG00000011064)	ENSPCIG00000011072	MRGPRF (ENSPCIG00000011075)	ENSPCIG00000034514	TPCN2 (ENSPCIG00000005636)	CCND1 (ENSPCIG00000009078) #22	ENSPCIG00000009077	FGF19 (ENSPCIG00000004914) #24	FGF4 (ENSPCIG00000009076) #25	FGF3 (ENSPCIG00000009053) #26	ANO1 (ENSPCIG00000009030) #27	ENSPCIG00000009028 #28	ENSPCIG00000009025	PPFIA1 (ENSPCIG00000009009) #29	CTTN (ENSPCIG00000008932) #30	SHANK2 (ENSPCIG00000008921) #31	ENSPCIG00000035287 #31	DHCR7 (ENSPCIG00000019135) #32	ENSPCIG00000019137 #33	ENSPCIG00000019138	ENSPCIG00000018831
Wallaby	MODERN SPECIES	5638																ENSMEUG00000002218 #22
Tasmanian devil	MODERN SPECIES	5	PPP6R3 (ENSSHAG00000029610)	GAL (ENSSHAG00000005648)	TESMIN (ENSSHAG00000004539)	CPT1A (ENSSHAG00000003410)	ENSSHAG00000027996	IGHMBP2 (ENSSHAG00000001585)	ENSSHAG00000000304	MRGPRF (ENSSHAG00000031299)	ENSSHAG00000001669	ENSSHAG00000032129	ENSSHAG00000029471	ENSSHAG00000000514	ENSSHAG00000000834	ENSSHAG00000002638	TPCN2 (ENSSHAG00000004691)	CCND1 (ENSSHAG00000032182) #22	LTO1 (ENSSHAG00000031356) #23	FGF19 (ENSSHAG00000031311) #24	ANO1 (ENSSHAG00000000720) #27	ENSSHAG00000031774 #28	PPFIA1 (ENSSHAG00000006159) #29	CTTN (ENSSHAG00000027102) #30	SHANK2 (ENSSHAG00000031726) #31	ENSSHAG00000008066	DHCR7 (ENSSHAG00000025809) #32	ENSSHAG00000007467 #33	ENSSHAG00000007247	ENSSHAG00000006442	ENSSHAG00000022758	ENSSHAG00000005157	ENSSHAG00000031101