Muroidea_A ANCESTRAL SPECIES 15 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00900000143157 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 Murinae ANCESTRAL SPECIES 8 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Mus ANCESTRAL SPECIES 10 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Mus_C ANCESTRAL SPECIES 11 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Steppe mouse MODERN SPECIES 3155 Dhrs7 (ENSMSIG00000024915) #7 ENSMSIG00000024898 #8 4930447C04Rik (ENSMSIG00000024836) #9 Six6 (ENSMSIG00000024826) #10 ENSMSIG00000024815 #11 Six1 (ENSMSIG00000024807) #12 Six4 (ENSMSIG00000024804) #13 ENSMSIG00000024789 #14 Mnat1 (ENSMSIG00000024773) #15 Trmt5 (ENSMSIG00000024766) #16 Slc38a6 (ENSMSIG00000024679) #17 Tmem30b (ENSMSIG00000024663) #18 Prkch (ENSMSIG00000024638) #19 Hif1a (ENSMSIG00000024611) #20 ENSMSIG00000024606 #21 Snapc1 (ENSMSIG00000024569) #22 spretus MODERN SPECIES 3 Pcnx4 (MGP_SPRETEiJ_G0018681) MGP_SPRETEiJ_G0018682 ##7 Dhrs7 (MGP_SPRETEiJ_G0018683) #7 MGP_SPRETEiJ_G0018684 #8 4930447C04Rik (MGP_SPRETEiJ_G0018685) #9 Six6 (MGP_SPRETEiJ_G0018686) #10 Six1 (MGP_SPRETEiJ_G0018687) #12 Six4 (MGP_SPRETEiJ_G0018688) #13 Mnat1 (MGP_SPRETEiJ_G0018689) #15 Trmt5 (MGP_SPRETEiJ_G0018690) #16 Slc38a6 (MGP_SPRETEiJ_G0018691) #17 MGP_SPRETEiJ_G0018692 Tmem30b (MGP_SPRETEiJ_G0018693) #18 Prkch (MGP_SPRETEiJ_G0018694) #19 Hif1a (MGP_SPRETEiJ_G0018695) #20 Snapc1 (MGP_SPRETEiJ_G0018696) #22 MGP_SPRETEiJ_G0018697 MGP_SPRETEiJ_G0018698 Kcnh5 (MGP_SPRETEiJ_G0018699) Rhoj (MGP_SPRETEiJ_G0018700) Gphb5 (MGP_SPRETEiJ_G0018701) Ppp2r5e (MGP_SPRETEiJ_G0018702) Wdr89 (MGP_SPRETEiJ_G0018703) Sgpp1 (MGP_SPRETEiJ_G0018704) Syne2 (MGP_SPRETEiJ_G0018705) Esr2 (MGP_SPRETEiJ_G0018706) Tex21 (MGP_SPRETEiJ_G0018707) Mthfd1 (MGP_SPRETEiJ_G0018708) Akap5 (MGP_SPRETEiJ_G0018709) Zbtb25 (MGP_SPRETEiJ_G0018710) Zbtb1 (MGP_SPRETEiJ_G0018711) Mouse MODERN SPECIES 3 Lrrc9 (ENSMUSG00000021090) Pcnx4 (ENSMUSG00000034501) Gm4756 (ENSMUSG00000109482) ##7 Dhrs7 (ENSMUSG00000021094) #7 Ppm1a (ENSMUSG00000021096) #8 4930447C04Rik (ENSMUSG00000021098) #9 Six6 (ENSMUSG00000021099) #10 Six1 (ENSMUSG00000051367) #12 Six4 (ENSMUSG00000034460) #13 Mnat1 (ENSMUSG00000021103) #15 Trmt5 (ENSMUSG00000034442) #16 Slc38a6 (ENSMUSG00000044712) #17 Tmem30b (ENSMUSG00000034435) #18 Prkch (ENSMUSG00000021108) #19 Hif1a (ENSMUSG00000021109) #20 Snapc1 (ENSMUSG00000021113) #22 Syt16 (ENSMUSG00000044912) Kcnh5 (ENSMUSG00000034402) Rhoj (ENSMUSG00000046768) Gphb5 (ENSMUSG00000048982) Ppp2r5e (ENSMUSG00000021051) Wdr89 (ENSMUSG00000045690) Rplp2-ps1 (ENSMUSG00000118552) Sgpp1 (ENSMUSG00000021054) Syne2 (ENSMUSG00000063450) Esr2 (ENSMUSG00000021055) Tex21 (ENSMUSG00000021056) Mthfd1 (ENSMUSG00000021048) Akap5 (ENSMUSG00000021057) Zbtb25 (ENSMUSG00000056459) Zbtb1 (ENSMUSG00000033454) Ryukyu mouse MODERN SPECIES 3 Rtn1 (MGP_CAROLIEiJ_G0017834) Lrrc9 (MGP_CAROLIEiJ_G0017835) Pcnx4 (MGP_CAROLIEiJ_G0017836) Dhrs7 (MGP_CAROLIEiJ_G0017837) #7 4930447C04Rik (MGP_CAROLIEiJ_G0017838) #9 Six6 (MGP_CAROLIEiJ_G0017839) #10 Six1 (MGP_CAROLIEiJ_G0017840) #12 Six4 (MGP_CAROLIEiJ_G0017841) #13 Mnat1 (MGP_CAROLIEiJ_G0017842) #15 Trmt5 (MGP_CAROLIEiJ_G0017843) #16 Slc38a6 (MGP_CAROLIEiJ_G0017844) #17 MGP_CAROLIEiJ_G0017845 Tmem30b (MGP_CAROLIEiJ_G0017846) #18 Prkch (MGP_CAROLIEiJ_G0017847) #19 Hif1a (MGP_CAROLIEiJ_G0017848) #20 Snapc1 (MGP_CAROLIEiJ_G0017849) #22 MGP_CAROLIEiJ_G0017850 MGP_CAROLIEiJ_G0017851 Kcnh5 (MGP_CAROLIEiJ_G0017852) Rhoj (MGP_CAROLIEiJ_G0017853) Gphb5 (MGP_CAROLIEiJ_G0017854) Ppp2r5e (MGP_CAROLIEiJ_G0017855) Wdr89 (MGP_CAROLIEiJ_G0017856) Sgpp1 (MGP_CAROLIEiJ_G0017857) Syne2 (MGP_CAROLIEiJ_G0017858) Esr2 (MGP_CAROLIEiJ_G0017859) Tex21 (MGP_CAROLIEiJ_G0017860) Mthfd1 (MGP_CAROLIEiJ_G0017861) Akap5 (MGP_CAROLIEiJ_G0017862) Zbtb25 (MGP_CAROLIEiJ_G0017863) Zbtb1 (MGP_CAROLIEiJ_G0017864) Shrew mouse MODERN SPECIES 20 Lrrc9 (MGP_PahariEiJ_G0029591) Pcnx4 (MGP_PahariEiJ_G0029592) MGP_PahariEiJ_G0029593 ##7 MGP_PahariEiJ_G0029594 Ppm1a (MGP_PahariEiJ_G0029595) #8 4930447C04Rik (MGP_PahariEiJ_G0029596) #9 Six6 (MGP_PahariEiJ_G0029597) #10 Six1 (MGP_PahariEiJ_G0029598) #12 Six4 (MGP_PahariEiJ_G0029599) #13 Mnat1 (MGP_PahariEiJ_G0029600) #15 Trmt5 (MGP_PahariEiJ_G0029601) #16 Slc38a6 (MGP_PahariEiJ_G0029602) #17 Tmem30b (MGP_PahariEiJ_G0029603) #18 Prkch (MGP_PahariEiJ_G0029604) #19 Hif1a (MGP_PahariEiJ_G0029605) #20 Snapc1 (MGP_PahariEiJ_G0029606) #22 MGP_PahariEiJ_G0029607 MGP_PahariEiJ_G0029608 Kcnh5 (MGP_PahariEiJ_G0029609) Rhoj (MGP_PahariEiJ_G0029610) Gphb5 (MGP_PahariEiJ_G0029611) Ppp2r5e (MGP_PahariEiJ_G0029612) Wdr89 (MGP_PahariEiJ_G0029613) Sgpp1 (MGP_PahariEiJ_G0029614) Syne2 (MGP_PahariEiJ_G0029615) Esr2 (MGP_PahariEiJ_G0029616) Tex21 (MGP_PahariEiJ_G0029617) Mthfd1 (MGP_PahariEiJ_G0029618) Akap5 (MGP_PahariEiJ_G0029619) Zbtb25 (MGP_PahariEiJ_G0029620) Zbtb1 (MGP_PahariEiJ_G0029621) Rat MODERN SPECIES 16 Dhrs7 (ENSRNOG00000005589) #7 Dhrs7l1 (ENSRNOG00000025648) ##7 LOC100361944 (ENSRNOG00000029172) Ppm1a (ENSRNOG00000005916) #8 Six6os1 (ENSRNOG00000031655) #9 Six6 (ENSRNOG00000006296) #10 LOC108351255 (ENSRNOG00000033058) Six1 (ENSRNOG00000022777) #12 Six4 (ENSRNOG00000007250) #13 Mnat1 (ENSRNOG00000007267) #15 Trmt5 (ENSRNOG00000007785) #16 Slc38a6 (ENSRNOG00000022622) #17 Tmem30b (ENSRNOG00000008046) #18 Prkch (ENSRNOG00000004873) #19 Hif1a (ENSRNOG00000008292) #20 Snapc1 (ENSRNOG00000009296) #22 Syt16 (ENSRNOG00000056012) LOC102551114 (ENSRNOG00000069640) Kcnh5 (ENSRNOG00000009542) Rhoj (ENSRNOG00000021919) Gphb5 (ENSRNOG00000021885) Ppp2r5e (ENSRNOG00000005045) Wdr89 (ENSRNOG00000021628) ENSRNOG00000069102 Sgpp1 (ENSRNOG00000005175) Syne2 (ENSRNOG00000005323) Esr2 (ENSRNOG00000005343) Tex21 (ENSRNOG00000038496) Mthfd1 (ENSRNOG00000005602) Akap5 (ENSRNOG00000006410) Zbtb25 (ENSRNOG00000006441) Cricetidae ANCESTRAL SPECIES 17 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00900000143157 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00900000143157 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Chinese hamster chok1gshd MODERN SPECIES 2 Lrrc9 (ENSCGRG00001014760) Pcnx4 (ENSCGRG00001003784) Gm4756 (ENSCGRG00001023826) ##7 Dhrs7 (ENSCGRG00001021840) #7 Ppm1a (ENSCGRG00001021488) #8 4930447C04Rik (ENSCGRG00001020319) #9 Six6 (ENSCGRG00001018924) #10 Six1 (ENSCGRG00001016794) #12 Six4 (ENSCGRG00001015581) #13 Mnat1 (ENSCGRG00001013958) #15 TRMT5 (ENSCGRG00001018337) #16 Slc38a6 (ENSCGRG00001017345) #17 Tmem30b (ENSCGRG00001003797) #18 Prkch (ENSCGRG00001014324) #19 Hif1a (ENSCGRG00001010447) #20 Snapc1 (ENSCGRG00001005287) #22 Syt16 (ENSCGRG00001002432) ENSCGRG00001015454 ENSCGRG00001014697 Kcnh5 (ENSCGRG00001007416) ENSCGRG00001019189 Rhoj (ENSCGRG00001018599) Gphb5 (ENSCGRG00001016763) Ppp2r5e (ENSCGRG00001015447) Wdr89 (ENSCGRG00001008820) Sgpp1 (ENSCGRG00001003721) Syne2 (ENSCGRG00001016633) Esr2 (ENSCGRG00001010806) Tex21 (ENSCGRG00001019256) Mthfd1 (ENSCGRG00001013340) Akap5 (ENSCGRG00001010439) Cricetidae_B ANCESTRAL SPECIES 18 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.q.a ##7 ENSGT00940000155226.q.b #7 ENSGT00940000154832.n #8 ENSGT00390000010439 #9 ENSGT00940000160091 #10 ENSGT00940000156487 #12 ENSGT00940000160820 #13 ENSGT00390000002319 #15 ENSGT00940000153304.B #16 ENSGT00940000156982 #17 ENSGT00390000004660.C.a.b #18 ENSGT00940000158220 #19 ENSGT00940000156774 #20 ENSGT00390000018691 #22 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 Northern American deer mouse MODERN SPECIES 5 Pcnx4 (ENSPEMG00000012337) ENSPEMG00000010519 ##7 Dhrs7 (ENSPEMG00000022404) #7 ENSPEMG00000022755 #8 4930447C04Rik (ENSPEMG00000022526) #9 Six6 (ENSPEMG00000023894) #10 Six1 (ENSPEMG00000023303) #12 Six4 (ENSPEMG00000023238) #13 Mnat1 (ENSPEMG00000010838) #15 ENSPEMG00000025242 Trmt5 (ENSPEMG00000022664) #16 Slc38a6 (ENSPEMG00000022276) #17 Tmem30b (ENSPEMG00000004131) #18 Prkch (ENSPEMG00000021936) #19 Hif1a (ENSPEMG00000021582) #20 Snapc1 (ENSPEMG00000022871) #22 Syt16 (ENSPEMG00000021619) ENSPEMG00000025321 Kcnh5 (ENSPEMG00000013689) Rhoj (ENSPEMG00000012346) Gphb5 (ENSPEMG00000011800) Ppp2r5e (ENSPEMG00000011620) Wdr89 (ENSPEMG00000008710) Sgpp1 (ENSPEMG00000027553) Syne2 (ENSPEMG00000009583) Esr2 (ENSPEMG00000012465) Tex21 (ENSPEMG00000008708) Mthfd1 (ENSPEMG00000003064) ENSPEMG00000028388 Zbtb25 (ENSPEMG00000000332) Zbtb1 (ENSPEMG00000017710) Prairie vole MODERN SPECIES Tomm20l (ENSMOCG00000002773) Arid4a (ENSMOCG00000010098) Psma3 (ENSMOCG00000011319) Actr10 (ENSMOCG00000001339) Frmd6 (ENSMOCG00000002317) Tmx1 (ENSMOCG00000010006) Trim9 (ENSMOCG00000017949) Pygl (ENSMOCG00000019214) Abhd12b (ENSMOCG00000004427) Mnat1 (ENSMOCG00000021804) #15 Trmt5 (ENSMOCG00000020904) #16 Slc38a6 (ENSMOCG00000012994) #17 Tmem30b (ENSMOCG00000002996) #18 Prkch (ENSMOCG00000001011) #19 ENSMOCG00000006375 #20 Snapc1 (ENSMOCG00000014225) #22 Syt16 (ENSMOCG00000016610) Kcnh5 (ENSMOCG00000000656) ENSMOCG00000005268 ENSMOCG00000017494 Rhoj (ENSMOCG00000002647) Gphb5 (ENSMOCG00000020798) Ppp2r5e (ENSMOCG00000000642) Wdr89 (ENSMOCG00000018382) Sgpp1 (ENSMOCG00000003383) Syne2 (ENSMOCG00000018063) Esr2 (ENSMOCG00000020872) Tex21 (ENSMOCG00000012656) Mthfd1 (ENSMOCG00000019387) Akap5 (ENSMOCG00000021957) ENSMOCG00000005905