Eutheria ANCESTRAL SPECIES 2 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Glires ANCESTRAL SPECIES 13 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rodentia ANCESTRAL SPECIES 15 ENSGT00940000154447.y.a ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000162300 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Myomorpha ANCESTRAL SPECIES 37 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Muroidea ANCESTRAL SPECIES 38 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Muroidea_A ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Murinae ANCESTRAL SPECIES 4 ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rat MODERN SPECIES 14 ENSRNOG00000071146 #7 Ptbp1-ps3 (ENSRNOG00000070516) #8 Jkampl (ENSRNOG00000024604) #9 Suclg1 (ENSRNOG00000005587) #10 Dnah6 (ENSRNOG00000015581) #11 Tmsb10 (ENSRNOG00000064090) #12 Kcmf1 (ENSRNOG00000015097) #13 Tcf7l1 (ENSRNOG00000014753) #14 Tgoln2 (ENSRNOG00000014617) #15 Retsat (ENSRNOG00000014090) #16 Elmod3 (ENSRNOG00000038102) #17 Capg (ENSRNOG00000013668) #18 Sh2d6 (ENSRNOG00000013605) #19 Mat2a (ENSRNOG00000013520) #20 Ggcx (ENSRNOG00000012975) #21 Vamp8 (ENSRNOG00000012748) #22 Vamp5 (ENSRNOG00000012659) #23 Rnf181 (ENSRNOG00000012035) #24 Tmem150a (ENSRNOG00000061100) #25 LOC691113 (ENSRNOG00000011713) #26 Usp39 (ENSRNOG00000010930) #27 Sftpb (ENSRNOG00000010761) #28 Atoh8 (ENSRNOG00000010716) #29 ENSRNOG00000065207 #30 St3gal5 (ENSRNOG00000010284) #31 Polr1a (ENSRNOG00000009545) #32 Ptcd3 (ENSRNOG00000009484) #33 Immt (ENSRNOG00000009097) #34 Mrpl35 (ENSRNOG00000008546) #35 Reep1 (ENSRNOG00000008481) #36 Kdm3a (ENSRNOG00000007814) #37 Mus ANCESTRAL SPECIES 12 ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mus_A ANCESTRAL SPECIES 7 ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mus_B ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mouse MODERN SPECIES 15 Ctnna2 (ENSMUSG00000063063) Gm9008 (ENSMUSG00000072476) Jkampl (ENSMUSG00000056197) #9 Suclg1 (ENSMUSG00000052738) #10 Dnah6 (ENSMUSG00000052861) #11 Tmsb10 (ENSMUSG00000079523) #12 Kcmf1 (ENSMUSG00000055239) #13 Tcf7l1 (ENSMUSG00000055799) #14 Tgoln1 (ENSMUSG00000056429) #15 Retsat (ENSMUSG00000056666) #16 Elmod3 (ENSMUSG00000056698) #17 Capg (ENSMUSG00000056737) #18 Sh2d6 (ENSMUSG00000052631) #19 Mat2a (ENSMUSG00000053907) #20 Ggcx (ENSMUSG00000053460) #21 Vamp8 (ENSMUSG00000050732) #22 Vamp5 (ENSMUSG00000073002) #23 Rnf181 (ENSMUSG00000055850) Tmem150a (ENSMUSG00000055912) #25 0610030E20Rik (ENSMUSG00000058706) #26 Usp39 (ENSMUSG00000056305) #27 Sftpb (ENSMUSG00000056370) #28 Atoh8 (ENSMUSG00000037621) #29 St3gal5 (ENSMUSG00000056091) #31 Polr1a (ENSMUSG00000049553) #32 Ptcd3 (ENSMUSG00000063884) #33 Immt (ENSMUSG00000052337) #34 Mrpl35 (ENSMUSG00000052962) #35 Reep1 (ENSMUSG00000052852) #36 Kdm3a (ENSMUSG00000053470) #37 Chmp3 (ENSMUSG00000053119) Mus_C ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C spretus MODERN SPECIES 15 Lrrtm1 (MGP_SPRETEiJ_G0029523) Ctnna2 (MGP_SPRETEiJ_G0029522) Jkampl (MGP_SPRETEiJ_G0029521) #9 Suclg1 (MGP_SPRETEiJ_G0029520) #10 Dnah6 (MGP_SPRETEiJ_G0029519) #11 MGP_SPRETEiJ_G0029518 #12 Kcmf1 (MGP_SPRETEiJ_G0029517) #13 Tcf7l1 (MGP_SPRETEiJ_G0029516) #14 Tgoln1 (MGP_SPRETEiJ_G0029515) #15 Retsat (MGP_SPRETEiJ_G0029514) #16 Elmod3 (MGP_SPRETEiJ_G0029513) #17 Capg (MGP_SPRETEiJ_G0029512) #18 MGP_SPRETEiJ_G0029511 #19 Mat2a (MGP_SPRETEiJ_G0029510) #20 Ggcx (MGP_SPRETEiJ_G0029509) #21 Vamp8 (MGP_SPRETEiJ_G0029508) #22 Vamp5 (MGP_SPRETEiJ_G0029507) #23 Rnf181 (MGP_SPRETEiJ_G0029506) Tmem150a (MGP_SPRETEiJ_G0029505) #25 0610030E20Rik (MGP_SPRETEiJ_G0029504) #26 Usp39 (MGP_SPRETEiJ_G0029503) #27 Sftpb (MGP_SPRETEiJ_G0029502) #28 Atoh8 (MGP_SPRETEiJ_G0029501) #29 St3gal5 (MGP_SPRETEiJ_G0029500) #31 Polr1a (MGP_SPRETEiJ_G0029499) #32 Ptcd3 (MGP_SPRETEiJ_G0029498) #33 Immt (MGP_SPRETEiJ_G0029497) #34 Mrpl35 (MGP_SPRETEiJ_G0029496) #35 MGP_SPRETEiJ_G0029495 #36 Kdm3a (MGP_SPRETEiJ_G0029494) #37 Chmp3 (MGP_SPRETEiJ_G0029493) Steppe mouse MODERN SPECIES 3287 ENSMSIG00000006995 Suclg1 (ENSMSIG00000007008) #10 ENSMSIG00000007054 ENSMSIG00000007062 Dnah6 (ENSMSIG00000007091) #11 Tmsb10b (ENSMSIG00000007285) Kcmf1 (ENSMSIG00000007304) #13 Tcf7l1 (ENSMSIG00000007365) #14 ENSMSIG00000007493 #15 Retsat (ENSMSIG00000007552) #16 Elmod3 (ENSMSIG00000007675) #17 Capg (ENSMSIG00000007704) #18 Sh2d6 (ENSMSIG00000007788) #19 Mat2a (ENSMSIG00000007887) #20 Ggcx (ENSMSIG00000007972) #21 Vamp8 (ENSMSIG00000008076) #22 ENSMSIG00000008096 #23 ENSMSIG00000008118 #24 Tmem150a (ENSMSIG00000008166) #25 0610030E20Rik (ENSMSIG00000008200) #26 Usp39 (ENSMSIG00000008226) #27 Sftpb (ENSMSIG00000008238) #28 Atoh8 (ENSMSIG00000008291) #29 St3gal5 (ENSMSIG00000008306) #31 ENSMSIG00000008349 Polr1a (ENSMSIG00000008358) #32 Ptcd3 (ENSMSIG00000008420) #33 Immt (ENSMSIG00000008522) #34 Mrpl35 (ENSMSIG00000009352) #35 Reep1 (ENSMSIG00000009384) #36 Kdm3a (ENSMSIG00000009485) #37 Ryukyu mouse MODERN SPECIES 15 Lrrtm1 (MGP_CAROLIEiJ_G0028518) Ctnna2 (MGP_CAROLIEiJ_G0028517) Jkampl (MGP_CAROLIEiJ_G0028516) #9 Suclg1 (MGP_CAROLIEiJ_G0028515) #10 Dnah6 (MGP_CAROLIEiJ_G0028514) #11 Tmsb10 (MGP_CAROLIEiJ_G0028513) #12 Kcmf1 (MGP_CAROLIEiJ_G0028512) #13 Tcf7l1 (MGP_CAROLIEiJ_G0028511) #14 Tgoln1 (MGP_CAROLIEiJ_G0028510) #15 Retsat (MGP_CAROLIEiJ_G0028509) #16 Elmod3 (MGP_CAROLIEiJ_G0028508) #17 Capg (MGP_CAROLIEiJ_G0028507) #18 Sh2d6 (MGP_CAROLIEiJ_G0028506) #19 Mat2a (MGP_CAROLIEiJ_G0028505) #20 Ggcx (MGP_CAROLIEiJ_G0028504) #21 Vamp8 (MGP_CAROLIEiJ_G0028503) #22 Vamp5 (MGP_CAROLIEiJ_G0028502) #23 MGP_CAROLIEiJ_G0028501 #24 Tmem150a (MGP_CAROLIEiJ_G0028500) #25 0610030E20Rik (MGP_CAROLIEiJ_G0028499) #26 Usp39 (MGP_CAROLIEiJ_G0028498) #27 Sftpb (MGP_CAROLIEiJ_G0028497) #28 Atoh8 (MGP_CAROLIEiJ_G0028496) #29 St3gal5 (MGP_CAROLIEiJ_G0028495) #31 Polr1a (MGP_CAROLIEiJ_G0028494) #32 Ptcd3 (MGP_CAROLIEiJ_G0028493) #33 Immt (MGP_CAROLIEiJ_G0028492) #34 Mrpl35 (MGP_CAROLIEiJ_G0028491) #35 MGP_CAROLIEiJ_G0028490 #36 Kdm3a (MGP_CAROLIEiJ_G0028489) #37 Chmp3 (MGP_CAROLIEiJ_G0028488) Shrew mouse MODERN SPECIES 11 Lrrtm1 (MGP_PahariEiJ_G0022253) Ctnna2 (MGP_PahariEiJ_G0022252) Jkampl (MGP_PahariEiJ_G0022251) #9 Suclg1 (MGP_PahariEiJ_G0022250) #10 Dnah6 (MGP_PahariEiJ_G0022249) #11 Tmsb10 (MGP_PahariEiJ_G0022248) #12 Kcmf1 (MGP_PahariEiJ_G0022247) #13 Tcf7l1 (MGP_PahariEiJ_G0022246) #14 MGP_PahariEiJ_G0022245 #15 Retsat (MGP_PahariEiJ_G0022244) #16 Elmod3 (MGP_PahariEiJ_G0022243) #17 Capg (MGP_PahariEiJ_G0022242) #18 Sh2d6 (MGP_PahariEiJ_G0022241) #19 Mat2a (MGP_PahariEiJ_G0022240) #20 Ggcx (MGP_PahariEiJ_G0022239) #21 Vamp8 (MGP_PahariEiJ_G0022238) #22 Rnf181 (MGP_PahariEiJ_G0022237) Tmem150a (MGP_PahariEiJ_G0022236) #25 0610030E20Rik (MGP_PahariEiJ_G0022235) #26 Usp39 (MGP_PahariEiJ_G0022234) #27 Sftpb (MGP_PahariEiJ_G0022233) #28 Atoh8 (MGP_PahariEiJ_G0022232) #29 St3gal5 (MGP_PahariEiJ_G0022231) #31 Polr1a (MGP_PahariEiJ_G0022230) #32 Ptcd3 (MGP_PahariEiJ_G0022229) #33 Immt (MGP_PahariEiJ_G0022228) #34 Mrpl35 (MGP_PahariEiJ_G0022227) #35 MGP_PahariEiJ_G0022226 #36 Kdm3a (MGP_PahariEiJ_G0022225) #37 Chmp3 (MGP_PahariEiJ_G0022224) Rnf103 (MGP_PahariEiJ_G0022223) Cricetidae ANCESTRAL SPECIES 3 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Chinese hamster chok1gshd MODERN SPECIES 242 Ctnna2 (ENSCGRG00001000241) Jkampl (ENSCGRG00001016234) #9 Suclg1 (ENSCGRG00001007965) #10 Dnah6 (ENSCGRG00001001087) #11 ENSCGRG00001017576 Tmsb10b (ENSCGRG00001017927) Kcmf1 (ENSCGRG00001018737) #13 Tcf7l1 (ENSCGRG00001021396) #14 ENSCGRG00001022789 #15 Retsat (ENSCGRG00001023894) #16 Elmod3 (ENSCGRG00001000477) #17 Capg (ENSCGRG00001001836) #18 Sh2d6 (ENSCGRG00001007691) #19 Mat2a (ENSCGRG00001010053) #20 Ggcx (ENSCGRG00001012860) #21 Vamp8 (ENSCGRG00001014727) #22 Vamp5 (ENSCGRG00001015261) #23 Tmem150a (ENSCGRG00001016577) #25 Rnf181 (ENSCGRG00001017863) 0610030E20Rik (ENSCGRG00001019313) #26 Usp39 (ENSCGRG00001019807) #27 Sftpb (ENSCGRG00001020533) #28 Atoh8 (ENSCGRG00001000824) #29 St3gal5 (ENSCGRG00001002527) #31 ENSCGRG00001015637 Polr1a (ENSCGRG00001006651) #32 Ptcd3 (ENSCGRG00001010361) #33 Immt (ENSCGRG00001013917) #34 Mrpl35 (ENSCGRG00001016701) #35 Reep1 (ENSCGRG00001018917) #36 Kdm3a (ENSCGRG00001020421) #37 Golden Hamster MODERN SPECIES 675 Sh2d6 (ENSMAUG00000000137) #19 Mat2a (ENSMAUG00000010463) #20 Ggcx (ENSMAUG00000014325) #21 Vamp8 (ENSMAUG00000018469) #22 Vamp5 (ENSMAUG00000010363) #23 ENSMAUG00000015068 #24 Tmem150a (ENSMAUG00000012394) #25 0610030E20Rik (ENSMAUG00000011957) #26 Usp39 (ENSMAUG00000009400) #27 Sftpb (ENSMAUG00000008956) #28 Atoh8 (ENSMAUG00000008236) #29 St3gal5 (ENSMAUG00000012326) #31 Polr1a (ENSMAUG00000008497) #32 Ptcd3 (ENSMAUG00000000145) #33 Immt (ENSMAUG00000011453) #34 Mrpl35 (ENSMAUG00000009361) #35 Reep1 (ENSMAUG00000013117) #36 Kdm3a (ENSMAUG00000006230) #37 Chmp3 (ENSMAUG00000009081) Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #9 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Prairie vole MODERN SPECIES 83 ENSMOCG00000004435 Suclg1 (ENSMOCG00000021421) #10 Dnah6 (ENSMOCG00000002417) #11 ENSMOCG00000012602 Kcmf1 (ENSMOCG00000003279) #13 Tcf7l1 (ENSMOCG00000012953) #14 ENSMOCG00000000091 #15 Retsat (ENSMOCG00000021447) #16 ENSMOCG00000000675 ENSMOCG00000002524 Elmod3 (ENSMOCG00000015870) #17 Capg (ENSMOCG00000005806) #18 Sh2d6 (ENSMOCG00000015508) #19 ENSMOCG00000011611 #20 Ggcx (ENSMOCG00000017281) #21 Vamp8 (ENSMOCG00000004037) #22 Vamp5 (ENSMOCG00000014948) #23 ENSMOCG00000020563 #24 Tmem150a (ENSMOCG00000012440) #25 0610030E20Rik (ENSMOCG00000022948) #26 Usp39 (ENSMOCG00000014162) #27 Sftpb (ENSMOCG00000003084) #28 Atoh8 (ENSMOCG00000019812) #29 St3gal5 (ENSMOCG00000005961) #31 Polr1a (ENSMOCG00000000122) #32 Ptcd3 (ENSMOCG00000019181) #33 Immt (ENSMOCG00000000827) #34 Mrpl35 (ENSMOCG00000008652) #35 Reep1 (ENSMOCG00000013750) #36 Kdm3a (ENSMOCG00000011851) #37 Chmp3 (ENSMOCG00000022847) Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000029513 Jkampl (ENSPEMG00000024694) #9 Suclg1 (ENSPEMG00000010810) #10 Dnah6 (ENSPEMG00000023939) #11 ENSPEMG00000030958 ENSPEMG00000026592 Kcmf1 (ENSPEMG00000029405) #13 Tcf7l1 (ENSPEMG00000004714) #14 Tgoln1 (ENSPEMG00000007145) #15 Retsat (ENSPEMG00000011191) #16 Elmod3 (ENSPEMG00000010510) #17 Capg (ENSPEMG00000018215) #18 Sh2d6 (ENSPEMG00000016371) #19 Mat2a (ENSPEMG00000015257) #20 Ggcx (ENSPEMG00000013327) #21 Vamp8 (ENSPEMG00000029313) #22 Vamp5 (ENSPEMG00000027040) #23 ENSPEMG00000010283 #24 Tmem150a (ENSPEMG00000018551) #25 0610030E20Rik (ENSPEMG00000025650) #26 Usp39 (ENSPEMG00000030030) #27 Sftpb (ENSPEMG00000013792) #28 Atoh8 (ENSPEMG00000014683) #29 St3gal5 (ENSPEMG00000022543) #31 ENSPEMG00000023889 Polr1a (ENSPEMG00000022224) #32 Ptcd3 (ENSPEMG00000024106) #33 Immt (ENSPEMG00000009199) #34 Mrpl35 (ENSPEMG00000021175) #35 Reep1 (ENSPEMG00000021271) #36 Kdm3a (ENSPEMG00000020813) #37 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1096 ENSNGAG00000009815 Jkampl (ENSNGAG00000013694) #9 ENSNGAG00000023092 Suclg1 (ENSNGAG00000015283) #10 ENSNGAG00000013792 Dnah6 (ENSNGAG00000013760) #11 Tmsb10b (ENSNGAG00000016585) ENSNGAG00000017279 #13 Tcf7l1 (ENSNGAG00000020122) #14 Retsat (ENSNGAG00000007772) #16 Elmod3 (ENSNGAG00000017699) #17 Capg (ENSNGAG00000019315) #18 Sh2d6 (ENSNGAG00000000856) #19 Mat2a (ENSNGAG00000014289) #20 Ggcx (ENSNGAG00000000695) #21 ENSNGAG00000014911 #22 Vamp5 (ENSNGAG00000022303) #23 ENSNGAG00000010364 #24 Tmem150a (ENSNGAG00000000493) #25 0610030E20Rik (ENSNGAG00000012174) #26 Usp39 (ENSNGAG00000018760) #27 Sftpb (ENSNGAG00000020909) #28 Atoh8 (ENSNGAG00000017424) #29 ENSNGAG00000017959 St3gal5 (ENSNGAG00000020246) #31 Upper Galilee mountains blind mole rat MODERN SPECIES 1224 Stab2 (ENSNGAG00000001493) Nt5dc3 (ENSNGAG00000018361) Hsp90b1 (ENSNGAG00000014447) ENSNGAG00000013621 Tdg (ENSNGAG00000000667) Glt8d2 (ENSNGAG00000002040) Hcfc2 (ENSNGAG00000019076) Nfyb (ENSNGAG00000017224) Eid3 (ENSNGAG00000019100) ENSNGAG00000019222 Chst11 (ENSNGAG00000017327) ENSNGAG00000015399 #22 Slc41a2 (ENSNGAG00000013889) Nopchap1 (ENSNGAG00000012316) Aldh1l2 (ENSNGAG00000020174) ENSNGAG00000019266 Washc4 (ENSNGAG00000015936) ENSNGAG00000014686 1500009L16Rik (ENSNGAG00000013967) Nuak1 (ENSNGAG00000011987) Ckap4 (ENSNGAG00000015103) Tcp11l2 (ENSNGAG00000012830) Polr3b (ENSNGAG00000011308) Rfx4 (ENSNGAG00000000351) Ric8b (ENSNGAG00000018867) Tmem263 (ENSNGAG00000015885) Mterf2 (ENSNGAG00000000529) Lesser Egyptian jerboa MODERN SPECIES 77 Suclg1 (ENSJJAG00000023782) #10 ENSJJAG00000020479 Dnah6 (ENSJJAG00000013999) #11 ENSJJAG00000009987 ENSJJAG00000006387 Kcmf1 (ENSJJAG00000020771) #13 ENSJJAG00000010136 Tcf7l1 (ENSJJAG00000023485) #14 ENSJJAG00000022764 Retsat (ENSJJAG00000018206) #16 Elmod3 (ENSJJAG00000015903) #17 Capg (ENSJJAG00000011988) #18 Sh2d6 (ENSJJAG00000011036) #19 Mat2a (ENSJJAG00000019942) #20 Ggcx (ENSJJAG00000013219) #21 Vamp8 (ENSJJAG00000023575) #22 Vamp5 (ENSJJAG00000021713) #23 ENSJJAG00000012435 #24 Tmem150a (ENSJJAG00000015485) #25 Sftpb (ENSJJAG00000020339) #28 Atoh8 (ENSJJAG00000003684) #29 St3gal5 (ENSJJAG00000012802) #31 Polr1a (ENSJJAG00000013113) #32 ENSJJAG00000012431 #33 Immt (ENSJJAG00000015348) #34 Reep1 (ENSJJAG00000021695) #36 Kdm3a (ENSJJAG00000022464) #37 ENSJJAG00000016934 ENSJJAG00000004517 Rnf103 (ENSJJAG00000013104) ENSJJAG00000002281 Kangaroo rat MODERN SPECIES 528 Suclg1 (ENSDORG00000010991) #10 Dnah6 (ENSDORG00000000400) #11 Tmsb10b (ENSDORG00000025129) Kcmf1 (ENSDORG00000029229) #13 Tcf7l1 (ENSDORG00000013753) #14 Retsat (ENSDORG00000009720) #16 Elmod3 (ENSDORG00000009721) #17 Capg (ENSDORG00000009722) #18 Sh2d6 (ENSDORG00000013882) #19 Mat2a (ENSDORG00000011312) #20 Ggcx (ENSDORG00000006726) #21 Vamp8 (ENSDORG00000010738) #22 Vamp5 (ENSDORG00000027327) #23 ENSDORG00000010740 #24 Tmem150a (ENSDORG00000010742) #25 0610030E20Rik (ENSDORG00000030143) #26 Usp39 (ENSDORG00000010746) #27 Sftpb (ENSDORG00000010751) #28 Atoh8 (ENSDORG00000028892) #29 St3gal5 (ENSDORG00000008296) #31 Polr1a (ENSDORG00000008298) #32 Ptcd3 (ENSDORG00000008305) #33 ENSDORG00000001073 #34 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000154447.z ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Sciuridae ANCESTRAL SPECIES 53 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Marmotini ANCESTRAL SPECIES 86 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Alpin marmot MODERN SPECIES 118 ENSMMMG00000007007 ENSMMMG00000007012 ENSMMMG00000007026 RPIA (ENSMMMG00000007477) ENSMMMG00000007572 ENSMMMG00000007617 ENSMMMG00000007627 TCF7L1 (ENSMMMG00000007633) #14 ENSMMMG00000007682 #15 RETSAT (ENSMMMG00000007689) #16 ENSMMMG00000007785 #17 CAPG (ENSMMMG00000007822) #18 ENSMMMG00000007857 #19 MAT2A (ENSMMMG00000007871) #20 GGCX (ENSMMMG00000008142) #21 VAMP8 (ENSMMMG00000008162) #22 VAMP5 (ENSMMMG00000008168) #23 RNF181 (ENSMMMG00000008179) #24 TMEM150A (ENSMMMG00000008189) #25 USP39 (ENSMMMG00000008203) #27 ENSMMMG00000008853 #26 SFTPB (ENSMMMG00000008881) #28 ST3GAL5 (ENSMMMG00000008911) #31 POLR1A (ENSMMMG00000008920) #32 PTCD3 (ENSMMMG00000008977) #33 IMMT (ENSMMMG00000009011) #34 MRPL35 (ENSMMMG00000009181) #35 REEP1 (ENSMMMG00000009193) #36 KDM3A (ENSMMMG00000009242) #37 CHMP3 (ENSMMMG00000009359) RNF103 (ENSMMMG00000009373) Marmotini_b ANCESTRAL SPECIES 128 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000154129.m.r.b ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Squirrel MODERN SPECIES 312 RPIA (ENSSTOG00000023312) ENSSTOG00000034297 ENSSTOG00000031036 TCF7L1 (ENSSTOG00000021988) #14 ENSSTOG00000020177 #15 RETSAT (ENSSTOG00000026131) #16 ELMOD3 (ENSSTOG00000009420) #17 CAPG (ENSSTOG00000009431) #18 ENSSTOG00000010788 #19 MAT2A (ENSSTOG00000010796) #20 GGCX (ENSSTOG00000010797) #21 VAMP8 (ENSSTOG00000005962) #22 VAMP5 (ENSSTOG00000005966) #23 RNF181 (ENSSTOG00000005973) #24 TMEM150A (ENSSTOG00000023355) #25 C2orf68 (ENSSTOG00000032886) #26 USP39 (ENSSTOG00000015986) #27 SFTPB (ENSSTOG00000026197) #28 ENSSTOG00000033478 ATOH8 (ENSSTOG00000006538) #29 ST3GAL5 (ENSSTOG00000024816) #31 ENSSTOG00000012609 POLR1A (ENSSTOG00000012580) #32 PTCD3 (ENSSTOG00000012611) #33 IMMT (ENSSTOG00000012624) #34 MRPL35 (ENSSTOG00000030233) #35 REEP1 (ENSSTOG00000025141) #36 Arctic ground squirrel MODERN SPECIES 609 IGKC (ENSUPAG00010018047) RPIA (ENSUPAG00010018051) ENSUPAG00010018060 TCF7L1 (ENSUPAG00010018088) #14 ENSUPAG00010018102 #15 RETSAT (ENSUPAG00010018105) #16 ELMOD3 (ENSUPAG00010018158) #17 CAPG (ENSUPAG00010018187) #18 SH2D6 (ENSUPAG00010018214) #19 MAT2A (ENSUPAG00010000075) #20 GGCX (ENSUPAG00010000144) #21 VAMP8 (ENSUPAG00010000178) #22 ENSUPAG00010000192 #23 TMEM150A (ENSUPAG00010000226) #25 RNF181 (ENSUPAG00010000242) #24 ENSUPAG00010000260 #26 USP39 (ENSUPAG00010000286) #27 SFTPB (ENSUPAG00010000319) #28 ENSUPAG00010000360 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005019338 ENSSVLG00005019271 ENSSVLG00005018002 ENSSVLG00005017863 ENSSVLG00005017786 TCF7L1 (ENSSVLG00005017741) #14 ENSSVLG00005017693 #15 RETSAT (ENSSVLG00005017559) #16 ELMOD3 (ENSSVLG00005017414) #17 CAPG (ENSSVLG00005017210) #18 ENSSVLG00005017177 SH2D6 (ENSSVLG00005016979) #19 MAT2A (ENSSVLG00005016926) #20 ENSSVLG00005016868 GGCX (ENSSVLG00005016698) #21 VAMP8 (ENSSVLG00005016627) #22 VAMP5 (ENSSVLG00005016585) #23 RNF181 (ENSSVLG00005016555) #24 TMEM150A (ENSSVLG00005016477) #25 ENSSVLG00005016431 #26 USP39 (ENSSVLG00005016257) #27 SFTPB (ENSSVLG00005015980) #28 ATOH8 (ENSSVLG00005015922) #29 ST3GAL5 (ENSSVLG00005015795) #31 POLR1A (ENSSVLG00005015696) #32 PTCD3 (ENSSVLG00005016912) #33 IMMT (ENSSVLG00005016785) #34 MRPL35 (ENSSVLG00005016713) #35 REEP1 (ENSSVLG00005016418) #36 KDM3A (ENSSVLG00005016348) #37 CHMP3 (ENSSVLG00005016280) Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000154447.z.e.a ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Long-tailed chinchilla MODERN SPECIES 131 ENSCLAG00000005858 LRRTM1 (ENSCLAG00000005364) CTNNA2 (ENSCLAG00000013755) ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) #10 DNAH6 (ENSCLAG00000006035) #11 TMSB10 (ENSCLAG00000010365) KCMF1 (ENSCLAG00000009986) #13 TCF7L1 (ENSCLAG00000007414) #14 RETSAT (ENSCLAG00000008939) #16 ELMOD3 (ENSCLAG00000009003) #17 CAPG (ENSCLAG00000004481) #18 ENSCLAG00000006141 #19 MAT2A (ENSCLAG00000007205) #20 GGCX (ENSCLAG00000005838) #21 VAMP8 (ENSCLAG00000008880) #22 VAMP5 (ENSCLAG00000009915) #23 RNF181 (ENSCLAG00000006082) #24 TMEM150A (ENSCLAG00000005500) #25 C2orf68 (ENSCLAG00000009438) #26 USP39 (ENSCLAG00000006866) #27 SFTPB (ENSCLAG00000006471) #28 ATOH8 (ENSCLAG00000006142) #29 ST3GAL5 (ENSCLAG00000006950) #31 POLR1A (ENSCLAG00000005187) #32 PTCD3 (ENSCLAG00000007992) #33 IMMT (ENSCLAG00000005278) #34 MRPL35 (ENSCLAG00000004489) #35 REEP1 (ENSCLAG00000012499) #36 KDM3A (ENSCLAG00000011990) #37 CHMP3 (ENSCLAG00000009289) Degu MODERN SPECIES 203 ENSODEG00000002222 ENSODEG00000002212 SUCLG1 (ENSODEG00000002195) #10 DNAH6 (ENSODEG00000003756) #11 ENSODEG00000003596 ENSODEG00000003586 #13 TCF7L1 (ENSODEG00000003559) #14 RETSAT (ENSODEG00000003469) #16 ELMOD3 (ENSODEG00000003393) #17 CAPG (ENSODEG00000003321) #18 ENSODEG00000018929 SH2D6 (ENSODEG00000003239) #19 ENSODEG00000003186 #20 GGCX (ENSODEG00000003141) #21 VAMP8 (ENSODEG00000003107) #22 VAMP5 (ENSODEG00000003093) #23 RNF181 (ENSODEG00000003046) #24 TMEM150A (ENSODEG00000003753) #25 C2orf68 (ENSODEG00000003734) #26 USP39 (ENSODEG00000003717) #27 SFTPB (ENSODEG00000003695) #28 ATOH8 (ENSODEG00000003670) #29 ST3GAL5 (ENSODEG00000003647) #31 ENSODEG00000018941 POLR1A (ENSODEG00000003542) #32 PTCD3 (ENSODEG00000003461) #33 IMMT (ENSODEG00000003274) #34 MRPL35 (ENSODEG00000003180) #35 REEP1 (ENSODEG00000003133) #36 KDM3A (ENSODEG00000003061) #37 Guinea pig MODERN SPECIES 37 ENSCPOG00000004885 ENSCPOG00000032214 LRRTM1 (ENSCPOG00000001371) CTNNA2 (ENSCPOG00000023564) SUCLG1 (ENSCPOG00000003017) #10 DNAH6 (ENSCPOG00000015041) #11 KCMF1 (ENSCPOG00000023050) #13 TCF7L1 (ENSCPOG00000014492) #14 ENSCPOG00000037555 #15 RETSAT (ENSCPOG00000022640) #16 ELMOD3 (ENSCPOG00000007973) #17 CAPG (ENSCPOG00000007978) #18 ENSCPOG00000012229 #19 MAT2A (ENSCPOG00000001533) #20 GGCX (ENSCPOG00000001534) #21 VAMP8 (ENSCPOG00000001409) #22 VAMP5 (ENSCPOG00000021802) #23 RNF181 (ENSCPOG00000001938) #24 TMEM150A (ENSCPOG00000025516) #25 C2orf68 (ENSCPOG00000009311) #26 USP39 (ENSCPOG00000009315) #27 SFTPB (ENSCPOG00000035291) #28 ATOH8 (ENSCPOG00000006364) #29 ST3GAL5 (ENSCPOG00000000993) #31 POLR1A (ENSCPOG00000012350) #32 PTCD3 (ENSCPOG00000012371) #33 IMMT (ENSCPOG00000012379) #34 MRPL35 (ENSCPOG00000012387) #35 REEP1 (ENSCPOG00000012389) #36 KDM3A (ENSCPOG00000023055) #37 CHMP3 (ENSCPOG00000001723) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000020983 SUCLG1 (ENSHGLG00000047475) #10 ENSHGLG00000016621 #11 ENSHGLG00000039609 ENSHGLG00000036565 #13 ENSHGLG00000049290 TCF7L1 (ENSHGLG00000044140) #14 ENSHGLG00000007230 #15 RETSAT (ENSHGLG00000009788) #16 ENSHGLG00000005816 #17 ENSHGLG00000043435 CAPG (ENSHGLG00000004995) #18 SH2D6 (ENSHGLG00000016223) #19 MAT2A (ENSHGLG00000018376) #20 GGCX (ENSHGLG00000013929) #21 VAMP8 (ENSHGLG00000012997) #22 ENSHGLG00000012613 #23 RNF181 (ENSHGLG00000045564) #24 TMEM150A (ENSHGLG00000010994) #25 C2orf68 (ENSHGLG00000036696) #26 USP39 (ENSHGLG00000015846) #27 SFTPB (ENSHGLG00000016430) #28 ENSHGLG00000033431 ATOH8 (ENSHGLG00000013394) #29 ST3GAL5 (ENSHGLG00000015817) #31 ENSHGLG00000050264 ENSHGLG00000006334 #32 PTCD3 (ENSHGLG00000007937) #33 IMMT (ENSHGLG00000004647) #34 ENSHGLG00000049882 MRPL35 (ENSHGLG00000042289) #35 Lagomorpha ANCESTRAL SPECIES 47 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rabbit MODERN SPECIES 11 ENSOCUG00000032531 ENSOCUG00000031742 DNAH6 (ENSOCUG00000010057) #11 TMSB10 (ENSOCUG00000017506) TRABD2A (ENSOCUG00000010075) ENSOCUG00000035044 #13 ENSOCUG00000002533 #13 TCF7L1 (ENSOCUG00000008749) #14 ENSOCUG00000008764 #15 RETSAT (ENSOCUG00000026865) #16 ELMOD3 (ENSOCUG00000002332) #17 CAPG (ENSOCUG00000002341) #18 ENSOCUG00000039138 MAT2A (ENSOCUG00000002361) #20 GGCX (ENSOCUG00000002368) #21 VAMP8 (ENSOCUG00000002375) #22 VAMP5 (ENSOCUG00000025906) #23 ENSOCUG00000007951 #24 TMEM150A (ENSOCUG00000007956) #25 ENSOCUG00000010066 #26 USP39 (ENSOCUG00000010070) #27 ENSOCUG00000020733 #28 ATOH8 (ENSOCUG00000003528) #29 ST3GAL5 (ENSOCUG00000010126) #31 POLR1A (ENSOCUG00000010138) #32 ENSOCUG00000010161 #33 IMMT (ENSOCUG00000010178) #34 ENSOCUG00000010188 MRPL35 (ENSOCUG00000010193) #35 REEP1 (ENSOCUG00000010196) #36 ENSOCUG00000034180 Pika MODERN SPECIES 3193 MAT2A (ENSOPRG00000001898) #20 GGCX (ENSOPRG00000001919) #21 VAMP8 (ENSOPRG00000001958) #22 ENSOPRG00000001972 RNF181 (ENSOPRG00000001980) #24 TMEM150A (ENSOPRG00000001987) #25 C2orf68 (ENSOPRG00000002005) #26 USP39 (ENSOPRG00000002019) #27 SFTPB (ENSOPRG00000002060) #28 ST3GAL5 (ENSOPRG00000002085) #31 Primates ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000163728 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Lemuriformes ANCESTRAL SPECIES 19 ENSGT00940000163728 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 26 LRRTM1 (ENSMICG00000038543) SUCLG1 (ENSMICG00000005754) #10 DNAH6 (ENSMICG00000015331) #11 ENSMICG00000035690 ENSMICG00000015388 TMSB10 (ENSMICG00000047627) KCMF1 (ENSMICG00000046646) #13 TCF7L1 (ENSMICG00000016146) #14 ENSMICG00000041852 #15 RETSAT (ENSMICG00000016157) #16 ELMOD3 (ENSMICG00000014497) #17 CAPG (ENSMICG00000015066) #18 ENSMICG00000015081 #19 MAT2A (ENSMICG00000011458) #20 GGCX (ENSMICG00000011475) #21 ENSMICG00000035021 #22 VAMP5 (ENSMICG00000011486) #23 RNF181 (ENSMICG00000011489) #24 TMEM150A (ENSMICG00000026572) #25 C2orf68 (ENSMICG00000044296) #26 USP39 (ENSMICG00000011500) #27 SFTPB (ENSMICG00000011514) #28 ATOH8 (ENSMICG00000007934) #29 ST3GAL5 (ENSMICG00000045558) #31 POLR1A (ENSMICG00000000757) #32 PTCD3 (ENSMICG00000000761) #33 IMMT (ENSMICG00000000770) #34 MRPL35 (ENSMICG00000000776) #35 REEP1 (ENSMICG00000000777) #36 KDM3A (ENSMICG00000000781) #37 ENSMICG00000005492 Mouse lemur MODERN SPECIES 10 ENSMICG00000029575 ENSMICG00000033758 ENSMICG00000033941 ADCYAP1 (ENSMICG00000030488) YES1 (ENSMICG00000028620) ENOSF1 (ENSMICG00000014847) TYMS (ENSMICG00000014830) CLUL1 (ENSMICG00000017333) COLEC12 (ENSMICG00000004528) THOC1 (ENSMICG00000027200) USP14 (ENSMICG00000009020) ROCK1 (ENSMICG00000014892) GREB1L (ENSMICG00000013562) ESCO1 (ENSMICG00000008993) SNRPD1 (ENSMICG00000044066) ENSMICG00000034736 #22 ABHD3 (ENSMICG00000002109) MIB1 (ENSMICG00000007890) GATA6 (ENSMICG00000044131) ENSMICG00000014338 RBBP8 (ENSMICG00000009274) CABLES1 (ENSMICG00000009282) TMEM241 (ENSMICG00000009287) RIOK3 (ENSMICG00000009293) RMC1 (ENSMICG00000009300) NPC1 (ENSMICG00000009311) ANKRD29 (ENSMICG00000009326) LAMA3 (ENSMICG00000009335) TTC39C (ENSMICG00000009394) ENSMICG00000044405 OSBPL1A (ENSMICG00000014621) Lemuriformes_a ANCESTRAL SPECIES 36 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00910000147626 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Greater bamboo lemur MODERN SPECIES 614 MAT2A (ENSPSMG00000023856) #20 GGCX (ENSPSMG00000023829) #21 VAMP8 (ENSPSMG00000023814) #22 VAMP5 (ENSPSMG00000023800) #23 RNF181 (ENSPSMG00000023793) #24 TMEM150A (ENSPSMG00000023779) #25 C2orf68 (ENSPSMG00000023768) #26 USP39 (ENSPSMG00000023744) #27 SFTPB (ENSPSMG00000023656) #28 ATOH8 (ENSPSMG00000023652) #29 ST3GAL5 (ENSPSMG00000023620) #31 POLR1A (ENSPSMG00000023525) #32 PTCD3 (ENSPSMG00000023446) #33 IMMT (ENSPSMG00000023275) #34 ENSPSMG00000023191 #35 REEP1 (ENSPSMG00000023171) #36 KDM3A (ENSPSMG00000023071) #37 CHMP3 (ENSPSMG00000022960) Coquerels sifaka MODERN SPECIES 300 ENSPCOG00000012720 #10 DNAH6 (ENSPCOG00000021699) #11 TMSB10 (ENSPCOG00000020577) KCMF1 (ENSPCOG00000024804) #13 TCF7L1 (ENSPCOG00000027574) #14 RETSAT (ENSPCOG00000018203) #16 ELMOD3 (ENSPCOG00000016503) #17 CAPG (ENSPCOG00000017087) #18 ENSPCOG00000027552 #19 MAT2A (ENSPCOG00000013199) #20 GGCX (ENSPCOG00000017501) #21 VAMP8 (ENSPCOG00000025762) #22 VAMP5 (ENSPCOG00000008979) #23 RNF181 (ENSPCOG00000019878) #24 TMEM150A (ENSPCOG00000019283) #25 C2orf68 (ENSPCOG00000017415) #26 USP39 (ENSPCOG00000018540) #27 ENSPCOG00000027418 #28 ATOH8 (ENSPCOG00000022872) #29 ST3GAL5 (ENSPCOG00000028704) #31 POLR1A (ENSPCOG00000026987) #32 PTCD3 (ENSPCOG00000005822) #33 IMMT (ENSPCOG00000028075) #34 MRPL35 (ENSPCOG00000007856) #35 REEP1 (ENSPCOG00000004132) #36 KDM3A (ENSPCOG00000008403) #37 CHMP3 (ENSPCOG00000018240) Bushbaby MODERN SPECIES 262 SUCLG1 (ENSOGAG00000004142) #10 DNAH6 (ENSOGAG00000011781) #11 ENSOGAG00000002147 KCMF1 (ENSOGAG00000034863) #13 TCF7L1 (ENSOGAG00000001078) #14 ENSOGAG00000032714 #15 RETSAT (ENSOGAG00000001079) #16 ELMOD3 (ENSOGAG00000001081) #17 CAPG (ENSOGAG00000001084) #18 MAT2A (ENSOGAG00000026925) #20 GGCX (ENSOGAG00000010470) #21 VAMP8 (ENSOGAG00000012281) #22 VAMP5 (ENSOGAG00000012283) #23 RNF181 (ENSOGAG00000012284) #24 TMEM150A (ENSOGAG00000012288) #25 C2orf68 (ENSOGAG00000033817) #26 USP39 (ENSOGAG00000012291) #27 SFTPB (ENSOGAG00000012294) #28 ATOH8 (ENSOGAG00000025987) #29 ST3GAL5 (ENSOGAG00000016459) #31 POLR1A (ENSOGAG00000004031) #32 PTCD3 (ENSOGAG00000004040) #33 ENSOGAG00000004046 #34 MRPL35 (ENSOGAG00000004048) #35 REEP1 (ENSOGAG00000004049) #36 KDM3A (ENSOGAG00000011445) #37 ENSOGAG00000030818 Haplorrhini ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.q #16 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Tarsier MODERN SPECIES 1905 ENSTSYG00000033439 #19 ENSTSYG00000036288 #20 GGCX (ENSTSYG00000008648) #21 VAMP8 (ENSTSYG00000009911) #22 VAMP5 (ENSTSYG00000001454) #23 RNF181 (ENSTSYG00000007140) #24 TMEM150A (ENSTSYG00000034230) #25 ENSTSYG00000027566 #26 USP39 (ENSTSYG00000000260) #27 SFTPB (ENSTSYG00000031502) #28 Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.q #16 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Catarrhini ANCESTRAL SPECIES 17 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00910000147626 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Hominoidea ANCESTRAL SPECIES 18 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Hominidae ANCESTRAL SPECIES 19 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Pan ANCESTRAL SPECIES 17 ENSGT00940000163007 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.a.b ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Bonobo MODERN SPECIES 14 TMSB10 (ENSPPAG00000012732) ENSPPAG00000037652 KCMF1 (ENSPPAG00000031415) #13 TCF7L1 (ENSPPAG00000030803) #14 ENSPPAG00000035809 ENSPPAG00000036633 ENSPPAG00000041446 ENSPPAG00000043071 ENSPPAG00000032707 #15 RETSAT (ENSPPAG00000031643) #16 ELMOD3 (ENSPPAG00000027146) #17 CAPG (ENSPPAG00000035666) #18 ENSPPAG00000037603 #19 MAT2A (ENSPPAG00000041128) #20 GGCX (ENSPPAG00000031307) #21 VAMP8 (ENSPPAG00000031084) #22 VAMP5 (ENSPPAG00000031044) #23 RNF181 (ENSPPAG00000031062) #24 TMEM150A (ENSPPAG00000029677) #25 C2orf68 (ENSPPAG00000027113) #26 USP39 (ENSPPAG00000028703) #27 SFTPB (ENSPPAG00000028425) #28 ENSPPAG00000029229 ATOH8 (ENSPPAG00000038955) #29 ST3GAL5 (ENSPPAG00000030557) #31 POLR1A (ENSPPAG00000042450) #32 PTCD3 (ENSPPAG00000027578) #33 IMMT (ENSPPAG00000031689) #34 MRPL35 (ENSPPAG00000042773) #35 REEP1 (ENSPPAG00000040193) #36 ENSPPAG00000036721 #37 Human MODERN SPECIES 11 CTNNA2 (ENSG00000066032) LRRTM1 (ENSG00000162951) SUCLG1 (ENSG00000163541) #10 DNAH6 (ENSG00000115423) #11 TRABD2A (ENSG00000186854) TMSB10 (ENSG00000034510) KCMF1 (ENSG00000176407) #13 TCF7L1 (ENSG00000152284) #14 TGOLN2 (ENSG00000152291) #15 RETSAT (ENSG00000042445) #16 ELMOD3 (ENSG00000115459) #17 CAPG (ENSG00000042493) #18 SH2D6 (ENSG00000152292) #19 MAT2A (ENSG00000168906) #20 GGCX (ENSG00000115486) #21 VAMP8 (ENSG00000118640) #22 VAMP5 (ENSG00000168899) #23 RNF181 (ENSG00000168894) #24 TMEM150A (ENSG00000168890) #25 USP39 (ENSG00000168883) #27 C2orf68 (ENSG00000168887) #26 SFTPB (ENSG00000168878) #28 GNLY (ENSG00000115523) ATOH8 (ENSG00000168874) #29 ST3GAL5 (ENSG00000115525) #31 POLR1A (ENSG00000068654) #32 PTCD3 (ENSG00000132300) #33 IMMT (ENSG00000132305) #34 MRPL35 (ENSG00000132313) #35 REEP1 (ENSG00000068615) #36 KDM3A (ENSG00000115548) #37 Orangutan MODERN SPECIES 14 ENSPPYG00000012243 SUCLG1 (ENSPPYG00000040003) #10 ENSPPYG00000039253 DNAH6 (ENSPPYG00000012240) #11 TRABD2A (ENSPPYG00000012239) TMSB10 (ENSPPYG00000030623) KCMF1 (ENSPPYG00000012235) #13 TCF7L1 (ENSPPYG00000012234) #14 TGOLN2 (ENSPPYG00000012712) #15 RETSAT (ENSPPYG00000012233) #16 ELMOD3 (ENSPPYG00000012232) #17 CAPG (ENSPPYG00000012231) #18 SH2D6 (ENSPPYG00000012230) #19 MAT2A (ENSPPYG00000012229) #20 GGCX (ENSPPYG00000012228) #21 VAMP8 (ENSPPYG00000012227) #22 VAMP5 (ENSPPYG00000036939) #23 RNF181 (ENSPPYG00000012225) #24 TMEM150A (ENSPPYG00000034938) #25 C2orf68 (ENSPPYG00000035994) #26 USP39 (ENSPPYG00000012222) #27 SFTPB (ENSPPYG00000012221) #28 ENSPPYG00000012220 ATOH8 (ENSPPYG00000012219) #29 ST3GAL5 (ENSPPYG00000033548) #31 POLR1A (ENSPPYG00000012217) #32 PTCD3 (ENSPPYG00000012216) #33 IMMT (ENSPPYG00000039510) #34 MRPL35 (ENSPPYG00000032949) #35 REEP1 (ENSPPYG00000012213) #36 KDM3A (ENSPPYG00000012212) #37 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00910000147298 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Vervet Monkey MODERN SPECIES 5 LRRTM1 (ENSCSAG00000019436) CTNNA2 (ENSCSAG00000015885) SUCLG1 (ENSCSAG00000015890) #10 DNAH6 (ENSCSAG00000015982) #11 TRABD2A (ENSCSAG00000016047) ENSCSAG00000016057 #12 ENSCSAG00000019435 TCF7L1 (ENSCSAG00000016081) #14 TGOLN2 (ENSCSAG00000016094) #15 RETSAT (ENSCSAG00000016104) #16 ELMOD3 (ENSCSAG00000016108) #17 CAPG (ENSCSAG00000016141) #18 ENSCSAG00000016162 #19 MAT2A (ENSCSAG00000016171) #20 GGCX (ENSCSAG00000016185) #21 VAMP8 (ENSCSAG00000016190) #22 VAMP5 (ENSCSAG00000016193) #23 RNF181 (ENSCSAG00000016198) #24 TMEM150A (ENSCSAG00000016204) #25 C2orf68 (ENSCSAG00000016209) #26 USP39 (ENSCSAG00000016215) #27 SFTPB (ENSCSAG00000016227) #28 ENSCSAG00000016230 ATOH8 (ENSCSAG00000016234) #29 ST3GAL5 (ENSCSAG00000016237) #31 POLR1A (ENSCSAG00000016251) #32 PTCD3 (ENSCSAG00000016267) #33 IMMT (ENSCSAG00000016310) #34 REEP1 (ENSCSAG00000016327) #36 KDM3A (ENSCSAG00000016343) #37 CHMP3 (ENSCSAG00000016348) Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.t #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Macaca ANCESTRAL SPECIES 17 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.t #13 ENSGT00940000157038.e #14 ENSGT00940000157038.f #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929.e #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313.g #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Pig-tailed macaque MODERN SPECIES 341 TRABD2A (ENSMNEG00000043453) TMSB10 (ENSMNEG00000033093) ENSMNEG00000011868 #13 KCMF1 (ENSMNEG00000042627) #13 TCF7L1 (ENSMNEG00000044913) #14 ENSMNEG00000017672 ENSMNEG00000016717 #16 TGOLN2 (ENSMNEG00000034111) #15 RETSAT (ENSMNEG00000043728) #16 ELMOD3 (ENSMNEG00000035964) #17 CAPG (ENSMNEG00000045231) #18 ENSMNEG00000030307 ENSMNEG00000042631 MAT2A (ENSMNEG00000042382) #20 GGCX (ENSMNEG00000023012) #21 VAMP8 (ENSMNEG00000036220) #22 VAMP5 (ENSMNEG00000036172) #23 RNF181 (ENSMNEG00000040275) #24 TMEM150A (ENSMNEG00000014445) #25 C2orf68 (ENSMNEG00000043318) #26 USP39 (ENSMNEG00000040046) #27 SFTPB (ENSMNEG00000030255) #28 GNLY (ENSMNEG00000043254) ATOH8 (ENSMNEG00000041664) #29 ENSMNEG00000032428 #31 POLR1A (ENSMNEG00000043313) #32 PTCD3 (ENSMNEG00000032067) #33 IMMT (ENSMNEG00000030355) #34 MRPL35 (ENSMNEG00000043851) #35 REEP1 (ENSMNEG00000035235) #36 KDM3A (ENSMNEG00000043870) #37 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000161627.a.a.a.a.b.a.a.b.b.a.a ENSGT00940000163007 ENSGT00510000047171.t #13 ENSGT00940000157038.e #14 ENSGT00940000157038.f #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT01030000240253 ENSGT00940000161151 #29 ENSGT00940000157929.e #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313.g #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Rhesus MODERN SPECIES 4 SUCLG1 (ENSMMUG00000000908) #10 DNAH6 (ENSMMUG00000019116) #11 TRABD2A (ENSMMUG00000008855) ENSMMUG00000051834 TMSB10 (ENSMMUG00000056004) ENSMMUG00000062644 KCMF1 (ENSMMUG00000001414) #13 TCF7L1 (ENSMMUG00000020134) #14 TGOLN2 (ENSMMUG00000019417) #15 RETSAT (ENSMMUG00000019416) #16 ELMOD3 (ENSMMUG00000002673) #17 CAPG (ENSMMUG00000002675) #18 SH2D6 (ENSMMUG00000009966) #19 MAT2A (ENSMMUG00000004450) #20 GGCX (ENSMMUG00000004446) #21 VAMP8 (ENSMMUG00000030785) #22 VAMP5 (ENSMMUG00000058122) #23 RNF181 (ENSMMUG00000063098) #24 TMEM150A (ENSMMUG00000062509) #25 C13H2orf68 (ENSMMUG00000050980) #26 ENSMMUG00000051721 USP39 (ENSMMUG00000017820) #27 SFTPB (ENSMMUG00000017818) #28 ENSMMUG00000063583 ATOH8 (ENSMMUG00000047424) #29 ST3GAL5 (ENSMMUG00000019559) #31 POLR1A (ENSMMUG00000015815) #32 PTCD3 (ENSMMUG00000015820) #33 IMMT (ENSMMUG00000015824) #34 MRPL35 (ENSMMUG00000020932) #35 REEP1 (ENSMMUG00000020930) #36 Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000053884 ENSMFAG00000041894 ENSMFAG00000063256 KCMF1 (ENSMFAG00000044887) #13 TCF7L1 (ENSMFAG00000043006) #14 ENSMFAG00000057476 #14 ENSMFAG00000035638 #16 TGOLN2 (ENSMFAG00000002786) #15 RETSAT (ENSMFAG00000001631) #16 ELMOD3 (ENSMFAG00000032988) #17 ENSMFAG00000037110 CAPG (ENSMFAG00000003357) #18 ENSMFAG00000002993 #19 MAT2A (ENSMFAG00000002027) #20 GGCX (ENSMFAG00000045991) #21 VAMP8 (ENSMFAG00000034493) #22 VAMP5 (ENSMFAG00000009769) #23 RNF181 (ENSMFAG00000047260) #24 TMEM150A (ENSMFAG00000003805) #25 C2orf68 (ENSMFAG00000063159) #26 USP39 (ENSMFAG00000041090) #27 SFTPB (ENSMFAG00000040839) #28 ENSMFAG00000063745 ENSMFAG00000004079 ATOH8 (ENSMFAG00000031235) #29 ST3GAL5 (ENSMFAG00000043554) #31 POLR1A (ENSMFAG00000046097) #32 PTCD3 (ENSMFAG00000042757) #33 IMMT (ENSMFAG00000044373) #34 MRPL35 (ENSMFAG00000002964) #35 REEP1 (ENSMFAG00000038270) #36 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.s.a #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Olive baboon MODERN SPECIES 5 ENSPANG00000044948 SUCLG1 (ENSPANG00000018470) #10 DNAH6 (ENSPANG00000017584) #11 TRABD2A (ENSPANG00000026230) TMSB10 (ENSPANG00000045803) KCMF1 (ENSPANG00000007610) #13 TCF7L1 (ENSPANG00000018548) #14 ENSPANG00000050077 #16 TGOLN2 (ENSPANG00000005831) #15 RETSAT (ENSPANG00000009008) #16 ELMOD3 (ENSPANG00000024547) #17 CAPG (ENSPANG00000000842) #18 ENSPANG00000004074 #19 MAT2A (ENSPANG00000024065) #20 GGCX (ENSPANG00000020859) #21 VAMP8 (ENSPANG00000017285) #22 VAMP5 (ENSPANG00000016261) #23 RNF181 (ENSPANG00000024386) #24 TMEM150A (ENSPANG00000006521) #25 USP39 (ENSPANG00000017132) #27 C2orf68 (ENSPANG00000011060) #26 SFTPB (ENSPANG00000011084) #28 GNLY (ENSPANG00000022008) ATOH8 (ENSPANG00000048662) #29 ST3GAL5 (ENSPANG00000022914) #31 POLR1A (ENSPANG00000025908) #32 PTCD3 (ENSPANG00000009006) #33 IMMT (ENSPANG00000012838) #34 MRPL35 (ENSPANG00000025906) #35 REEP1 (ENSPANG00000009005) #36 KDM3A (ENSPANG00000012322) #37 Cercopithecinae_d ANCESTRAL SPECIES 136 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.s.a #13 ENSGT00940000157038 #14 ENSGT00390000012818.o.a.a.a.a ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00910000147298 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Drill MODERN SPECIES 1471 ENSMLEG00000019792 TCF7L1 (ENSMLEG00000034494) #14 TGOLN2 (ENSMLEG00000032339) #15 ENSMLEG00000042086 RETSAT (ENSMLEG00000035987) #16 ELMOD3 (ENSMLEG00000044317) #17 CAPG (ENSMLEG00000043889) #18 ENSMLEG00000033386 ENSMLEG00000030069 MAT2A (ENSMLEG00000028877) #20 GGCX (ENSMLEG00000029112) #21 VAMP8 (ENSMLEG00000036507) #22 VAMP5 (ENSMLEG00000036477) #23 RNF181 (ENSMLEG00000029338) #24 TMEM150A (ENSMLEG00000033025) #25 C2orf68 (ENSMLEG00000037933) #26 USP39 (ENSMLEG00000030185) #27 SFTPB (ENSMLEG00000034724) #28 GNLY (ENSMLEG00000031388) ATOH8 (ENSMLEG00000038096) #29 ST3GAL5 (ENSMLEG00000037788) #31 Sooty mangabey MODERN SPECIES 123 TRABD2A (ENSCATG00000034302) TMSB10 (ENSCATG00000040005) ENSCATG00000029438 #13 TCF7L1 (ENSCATG00000039504) #14 ENSCATG00000033790 ENSCATG00000024477 #16 TGOLN2 (ENSCATG00000035819) #15 ENSCATG00000036711 RETSAT (ENSCATG00000040068) #16 ELMOD3 (ENSCATG00000037573) #17 CAPG (ENSCATG00000035643) #18 ENSCATG00000037270 ENSCATG00000039329 MAT2A (ENSCATG00000004424) #20 GGCX (ENSCATG00000035800) #21 VAMP8 (ENSCATG00000029537) #22 RNF181 (ENSCATG00000033596) #24 TMEM150A (ENSCATG00000037683) #25 C2orf68 (ENSCATG00000034407) #26 USP39 (ENSCATG00000024635) #27 SFTPB (ENSCATG00000029505) #28 GNLY (ENSCATG00000029047) ATOH8 (ENSCATG00000042555) #29 ST3GAL5 (ENSCATG00000039141) #31 POLR1A (ENSCATG00000029786) #32 PTCD3 (ENSCATG00000036541) #33 IMMT (ENSCATG00000038962) #34 MRPL35 (ENSCATG00000037137) #35 REEP1 (ENSCATG00000037544) #36 KDM3A (ENSCATG00000016041) #37 CHMP3 (ENSCATG00000035889) Rhinopithecus ANCESTRAL SPECIES 280 ENSGT00910000147328 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.t #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Black snub-nosed monkey MODERN SPECIES 1845 ENSRBIG00000042213 ENSRBIG00000030434 #19 MAT2A (ENSRBIG00000040691) #20 GGCX (ENSRBIG00000027641) #21 VAMP8 (ENSRBIG00000032593) #22 VAMP5 (ENSRBIG00000040671) #23 RNF181 (ENSRBIG00000037300) #24 TMEM150A (ENSRBIG00000031271) #25 ENSRBIG00000028092 #26 USP39 (ENSRBIG00000030938) #27 ENSRBIG00000005054 SFTPB (ENSRBIG00000039671) #28 GNLY (ENSRBIG00000042514) ATOH8 (ENSRBIG00000021163) #29 ST3GAL5 (ENSRBIG00000044506) #31 POLR1A (ENSRBIG00000028335) #32 PTCD3 (ENSRBIG00000034809) #33 IMMT (ENSRBIG00000033551) #34 ENSRBIG00000043270 #35 REEP1 (ENSRBIG00000044318) #36 Golden snub-nosed monkey MODERN SPECIES 2316 MAT2A (ENSRROG00000039359) #20 GGCX (ENSRROG00000037659) #21 VAMP8 (ENSRROG00000038818) #22 VAMP5 (ENSRROG00000031654) #23 RNF181 (ENSRROG00000032844) #24 TMEM150A (ENSRROG00000036503) #25 ENSRROG00000029427 #26 USP39 (ENSRROG00000039568) #27 ENSRROG00000025648 SFTPB (ENSRROG00000027383) #28 GNLY (ENSRROG00000036075) ATOH8 (ENSRROG00000031621) #29 ST3GAL5 (ENSRROG00000031090) #31 POLR1A (ENSRROG00000031473) #32 PTCD3 (ENSRROG00000042210) #33 IMMT (ENSRROG00000023135) #34 MRPL35 (ENSRROG00000045417) #35 REEP1 (ENSRROG00000034941) #36 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00390000017613.q #16 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305.g #18 ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135.a #37 Cebidae ANCESTRAL SPECIES 15 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305.g #18 ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552.e.a #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135.a #37 Marmoset MODERN SPECIES 5 ENSCJAG00000073910 SUCLG1 (ENSCJAG00000019805) #10 DNAH6 (ENSCJAG00000019742) #11 TRABD2A (ENSCJAG00000019738) TMSB10 (ENSCJAG00000086618) ENSCJAG00000082255 ENSCJAG00000072028 KCMF1 (ENSCJAG00000019735) #13 TCF7L1 (ENSCJAG00000039504) #14 RETSAT (ENSCJAG00000019726) #16 ELMOD3 (ENSCJAG00000019718) #17 CAPG (ENSCJAG00000041726) #18 SH2D6 (ENSCJAG00000019695) #19 MAT2A (ENSCJAG00000019681) #20 GGCX (ENSCJAG00000019657) #21 VAMP8 (ENSCJAG00000046213) #22 VAMP5 (ENSCJAG00000019651) #23 ENSCJAG00000019647 #24 TMEM150A (ENSCJAG00000019638) #25 C2orf68 (ENSCJAG00000019632) #26 USP39 (ENSCJAG00000019594) #27 SFTPB (ENSCJAG00000019581) #28 ENSCJAG00000071875 GNLY (ENSCJAG00000065652) ATOH8 (ENSCJAG00000019571) #29 ST3GAL5 (ENSCJAG00000019564) #31 POLR1A (ENSCJAG00000019547) #32 PTCD3 (ENSCJAG00000019523) #33 IMMT (ENSCJAG00000019480) #34 ENSCJAG00000019467 #35 REEP1 (ENSCJAG00000038576) #36 Cebidae_a ANCESTRAL SPECIES 91 ENSGT00940000156351 #10 ENSGT00390000017955.c.q.b ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613.r #16 ENSGT00390000009488 #17 ENSGT00940000159305.g #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552.e.a #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.g.a #35 ENSGT00940000159532 #36 ENSGT00940000160135.a #37 Bolivian squirrel monkey MODERN SPECIES 196 SUCLG1 (ENSSBOG00000025277) #10 ENSSBOG00000024959 DNAH6 (ENSSBOG00000027150) #11 ENSSBOG00000026272 TRABD2A (ENSSBOG00000021372) TMSB10 (ENSSBOG00000024439) KCMF1 (ENSSBOG00000028450) #13 TCF7L1 (ENSSBOG00000024977) #14 ENSSBOG00000029932 #15 RETSAT (ENSSBOG00000027110) #16 ELMOD3 (ENSSBOG00000026015) #17 CAPG (ENSSBOG00000026620) #18 ENSSBOG00000004955 ENSSBOG00000020245 #20 ENSSBOG00000024413 #21 VAMP8 (ENSSBOG00000025099) #22 VAMP5 (ENSSBOG00000023652) #23 RNF181 (ENSSBOG00000025972) #24 TMEM150A (ENSSBOG00000030498) #25 C2orf68 (ENSSBOG00000032799) #26 USP39 (ENSSBOG00000031347) #27 SFTPB (ENSSBOG00000033848) #28 Capuchin MODERN SPECIES 651 TCF7L1 (ENSCCAG00000015290) #14 SNRPC (ENSCCAG00000028293) ENSCCAG00000021530 #16 TGOLN2 (ENSCCAG00000026086) #15 RETSAT (ENSCCAG00000033378) #16 ELMOD3 (ENSCCAG00000019649) #17 ENSCCAG00000029318 #18 ENSCCAG00000028615 ENSCCAG00000021850 #19 ENSCCAG00000011821 MAT2A (ENSCCAG00000020027) #20 GGCX (ENSCCAG00000029602) #21 VAMP8 (ENSCCAG00000027515) #22 VAMP5 (ENSCCAG00000036984) #23 ENSCCAG00000025694 #24 TMEM150A (ENSCCAG00000019691) #25 ENSCCAG00000025404 #26 USP39 (ENSCCAG00000033512) #27 SFTPB (ENSCCAG00000027112) #28 GNLY (ENSCCAG00000030545) ATOH8 (ENSCCAG00000023833) #29 Mas night monkey MODERN SPECIES 633 ENSANAG00000029217 #20 GGCX (ENSANAG00000024216) #21 VAMP8 (ENSANAG00000022750) #22 VAMP5 (ENSANAG00000027585) #23 ENSANAG00000035031 #24 TMEM150A (ENSANAG00000022848) #25 C2orf68 (ENSANAG00000011782) #26 ENSANAG00000037337 #27 SFTPB (ENSANAG00000028481) #28 ENSANAG00000036833 ATOH8 (ENSANAG00000037969) #29 ST3GAL5 (ENSANAG00000027759) #31 POLR1A (ENSANAG00000033927) #32 PTCD3 (ENSANAG00000032500) #33 ENSANAG00000015996 IMMT (ENSANAG00000020307) #34 MRPL35 (ENSANAG00000030616) #35 REEP1 (ENSANAG00000034595) #36 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000160325.b #22 Common shrew MODERN SPECIES 1408 VAMP8 (ENSSARG00000001240) #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Suina ANCESTRAL SPECIES 13 ENSGT00940000154909 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Chacoan peccary MODERN SPECIES 778 ENSCWAG00000019058 CTNNA2 (ENSCWAG00000019150) LRRTM1 (ENSCWAG00000019999) SUCLG1 (ENSCWAG00000020040) #10 DNAH6 (ENSCWAG00000020066) #11 TMSB10 (ENSCWAG00000020204) KCMF1 (ENSCWAG00000003682) #13 TCF7L1 (ENSCWAG00000003731) #14 ENSCWAG00000003769 #15 RETSAT (ENSCWAG00000003794) #16 ELMOD3 (ENSCWAG00000003833) #17 CAPG (ENSCWAG00000003883) #18 ENSCWAG00000003929 MAT2A (ENSCWAG00000003951) #20 GGCX (ENSCWAG00000004008) #21 VAMP8 (ENSCWAG00000004178) #22 VAMP5 (ENSCWAG00000004199) #23 RNF181 (ENSCWAG00000004223) #24 TMEM150A (ENSCWAG00000004246) #25 C2orf68 (ENSCWAG00000004281) #26 USP39 (ENSCWAG00000004340) #27 SFTPB (ENSCWAG00000004607) #28 ENSCWAG00000004815 ATOH8 (ENSCWAG00000004847) #29 ST3GAL5 (ENSCWAG00000004882) #31 POLR1A (ENSCWAG00000005022) #32 PTCD3 (ENSCWAG00000005070) #33 IMMT (ENSCWAG00000005105) #34 MRPL35 (ENSCWAG00000005221) #35 REEP1 (ENSCWAG00000005308) #36 KDM3A (ENSCWAG00000005579) #37 Pig MODERN SPECIES 11 LRRTM1 (ENSSSCG00000023859) ENSSSCG00000008250 SUCLG1 (ENSSSCG00000008247) #10 DNAH6 (ENSSSCG00000045529) #11 TMSB10 (ENSSSCG00000008245) #12 KCMF1 (ENSSSCG00000008242) #13 ENSSSCG00000051279 ENSSSCG00000008241 #14 ENSSSCG00000050627 #15 RETSAT (ENSSSCG00000008237) #16 ELMOD3 (ENSSSCG00000008238) #17 CAPG (ENSSSCG00000008239) #18 ENSSSCG00000008240 #19 MAT2A (ENSSSCG00000022300) #20 GGCX (ENSSSCG00000027381) #21 VAMP8 (ENSSSCG00000062938) #22 VAMP5 (ENSSSCG00000033135) #23 RNF181 (ENSSSCG00000008232) #24 TMEM150A (ENSSSCG00000008233) #25 C2orf68 (ENSSSCG00000028287) #26 USP39 (ENSSSCG00000030435) #27 SFTPB (ENSSSCG00000008229) #28 GNLY (ENSSSCG00000008228) ATOH8 (ENSSSCG00000008230) #29 ST3GAL5 (ENSSSCG00000008227) #31 ENSSSCG00000058352 POLR1A (ENSSSCG00000008226) #32 PTCD3 (ENSSSCG00000008225) #33 IMMT (ENSSSCG00000024564) #34 MRPL35 (ENSSSCG00000021746) #35 REEP1 (ENSSSCG00000023710) #36 Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Camelidae ANCESTRAL SPECIES 89 ENSGT00940000154909 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681 #12 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Arabian camel MODERN SPECIES 20 ENSCDRG00005017522 LRRTM1 (ENSCDRG00005017487) ENSCDRG00005017214 SUCLG1 (ENSCDRG00005017092) #10 DNAH6 (ENSCDRG00005017032) #11 ENSCDRG00005016982 #12 KCMF1 (ENSCDRG00005016907) #13 TCF7L1 (ENSCDRG00005016823) #14 ENSCDRG00005016793 #15 RETSAT (ENSCDRG00005016753) #16 ELMOD3 (ENSCDRG00005016681) #17 CAPG (ENSCDRG00005016605) #18 SH2D6 (ENSCDRG00005016477) #19 MAT2A (ENSCDRG00005016380) #20 GGCX (ENSCDRG00005016233) #21 VAMP8 (ENSCDRG00005016194) #22 VAMP5 (ENSCDRG00005016173) #23 RNF181 (ENSCDRG00005016091) #24 TMEM150A (ENSCDRG00005016019) #25 C2orf68 (ENSCDRG00005015950) #26 USP39 (ENSCDRG00005015614) #27 SFTPB (ENSCDRG00005015553) #28 ENSCDRG00005015532 ATOH8 (ENSCDRG00005015499) #29 ST3GAL5 (ENSCDRG00005015428) #31 POLR1A (ENSCDRG00005015250) #32 PTCD3 (ENSCDRG00005015005) #33 IMMT (ENSCDRG00005014543) #34 MRPL35 (ENSCDRG00005014433) #35 REEP1 (ENSCDRG00005014142) #36 KDM3A (ENSCDRG00005013998) #37 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Pecora ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 Percora_a ANCESTRAL SPECIES 13 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 Caprinae ANCESTRAL SPECIES 9 ENSGT00940000154447.j.a ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 19 CTNNA2 (ENSOARG00020002405) LRRTM1 (ENSOARG00020002530) ENSOARG00020002555 ENSOARG00020002597 SUCLG1 (ENSOARG00020002604) #10 DNAH6 (ENSOARG00020002647) #11 TMSB10 (ENSOARG00020002756) KCMF1 (ENSOARG00020002774) #13 TCF7L1 (ENSOARG00020002813) #14 ENSOARG00020002845 #15 GGCX (ENSOARG00020002878) #21 ELMOD3 (ENSOARG00020002916) #17 CAPG (ENSOARG00020002936) #18 SH2D6 (ENSOARG00020002951) #19 MAT2A (ENSOARG00020002979) #20 ENSOARG00020002994 #22 VAMP5 (ENSOARG00020003011) #23 RNF181 (ENSOARG00020003033) #24 TMEM150A (ENSOARG00020003074) #25 C2orf68 (ENSOARG00020003094) #26 USP39 (ENSOARG00020003123) #27 SFTPB (ENSOARG00020003261) #28 ENSOARG00020003392 ENSOARG00020003492 ATOH8 (ENSOARG00020003526) #29 ST3GAL5 (ENSOARG00020003555) #31 POLR1A (ENSOARG00020003653) #32 PTCD3 (ENSOARG00020000168) #33 IMMT (ENSOARG00020000246) #34 MRPL35 (ENSOARG00020000311) #35 REEP1 (ENSOARG00020000378) #36 Rambouillet Sheep MODERN SPECIES 12 ENSOARG00020008159 ENSOARG00020008182 ENSOARG00020008200 ENSOARG00020008220 ENSOARG00020008257 ENSOARG00020008272 ENSOARG00020008289 ENSOARG00020008313 ENSOARG00020008332 ENSOARG00020008348 ENSOARG00020008387 ENSOARG00020008400 ENSOARG00020008443 ABT1 (ENSOARG00020008475) HMGN4 (ENSOARG00020008517) ENSOARG00020008536 #22 BTN1A1 (ENSOARG00020008558) BTN2A1 (ENSOARG00020008605) ENSOARG00020008941 ENSOARG00020008979 ENSOARG00020008987 ENSOARG00020009000 ENSOARG00020009029 ENSOARG00020009051 ENSOARG00020009069 ENSOARG00020009082 ENSOARG00020009101 H1-3 (ENSOARG00020009112) ENSOARG00020009146 ENSOARG00020009194 ENSOARG00020009213 Goat MODERN SPECIES 2 ENSCHIG00000027191 SUCLG1 (ENSCHIG00000020517) #10 ENSCHIG00000025501 #11 ENSCHIG00000017397 #11 KCMF1 (ENSCHIG00000000578) #13 ENSCHIG00000009602 ENSCHIG00000009524 TCF7L1 (ENSCHIG00000010768) #14 ENSCHIG00000019585 #15 RETSAT (ENSCHIG00000007516) #16 ELMOD3 (ENSCHIG00000024857) #17 CAPG (ENSCHIG00000021024) #18 ENSCHIG00000009669 #19 MAT2A (ENSCHIG00000026409) #20 GGCX (ENSCHIG00000014770) #21 VAMP8 (ENSCHIG00000016859) #22 VAMP5 (ENSCHIG00000026930) #23 RNF181 (ENSCHIG00000008537) #24 TMEM150A (ENSCHIG00000020450) #25 C2orf68 (ENSCHIG00000026643) #26 USP39 (ENSCHIG00000021013) #27 SFTPB (ENSCHIG00000025259) #28 ENSCHIG00000016379 ENSCHIG00000024407 ATOH8 (ENSCHIG00000011327) #29 ST3GAL5 (ENSCHIG00000021591) #31 POLR1A (ENSCHIG00000018204) #32 PTCD3 (ENSCHIG00000012077) #33 IMMT (ENSCHIG00000026338) #34 MRPL35 (ENSCHIG00000016097) #35 REEP1 (ENSCHIG00000015577) #36 Bovinae ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000010045.k.a.a.a.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.b ENSGT00390000002975.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 Bos ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 Bos_b ANCESTRAL SPECIES 16 ENSGT01030000234543.A.a ENSGT01100000263508.B.a.b.b.b ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681 #12 ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.b ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005011272 SUCLG1 (ENSBIXG00005005699) #10 DNAH6 (ENSBIXG00005011481) #11 ENSBIXG00005011532 ENSBIXG00005001125 #12 ENSBIXG00005011559 KCMF1 (ENSBIXG00005011582) #13 TCF7L1 (ENSBIXG00005011607) #14 ENSBIXG00005011629 #15 RETSAT (ENSBIXG00005001146) #16 ELMOD3 (ENSBIXG00005011661) #17 CAPG (ENSBIXG00005011729) #18 ENSBIXG00005011750 #19 MAT2A (ENSBIXG00005011796) #20 GGCX (ENSBIXG00005011842) #21 VAMP8 (ENSBIXG00005011878) #22 VAMP5 (ENSBIXG00005001186) #23 RNF181 (ENSBIXG00005011916) #24 TMEM150A (ENSBIXG00005011956) #25 C2orf68 (ENSBIXG00005011982) #26 USP39 (ENSBIXG00005012067) #27 SFTPB (ENSBIXG00005012111) #28 ENSBIXG00005012133 ENSBIXG00005012155 ENSBIXG00005012225 ATOH8 (ENSBIXG00005001275) #29 ST3GAL5 (ENSBIXG00005000387) #31 POLR1A (ENSBIXG00005012344) #32 PTCD3 (ENSBIXG00005012368) #33 IMMT (ENSBIXG00005012441) #34 MRPL35 (ENSBIXG00005001353) #35 Cow MODERN SPECIES 2 ENSBTAG00000050900 SUCLG1 (ENSBTAG00000006075) #10 DNAH6 (ENSBTAG00000049566) #11 TMSB10 (ENSBTAG00000005654) #12 ENSBTAG00000048762 KCMF1 (ENSBTAG00000020630) #13 HIGD1A (ENSBTAG00000031731) TCF7L1 (ENSBTAG00000010111) #14 ENSBTAG00000038116 #15 RETSAT (ENSBTAG00000021934) #16 ELMOD3 (ENSBTAG00000021935) #17 CAPG (ENSBTAG00000005432) #18 ENSBTAG00000048587 #19 MAT2A (ENSBTAG00000020873) #20 GGCX (ENSBTAG00000038477) #21 VAMP8 (ENSBTAG00000023997) #22 VAMP5 (ENSBTAG00000018285) #23 RNF181 (ENSBTAG00000018286) #24 TMEM150A (ENSBTAG00000018289) #25 C11H2orf68 (ENSBTAG00000018291) #26 USP39 (ENSBTAG00000010691) #27 SFTPB (ENSBTAG00000021230) #28 ENSBTAG00000031828 GNLY (ENSBTAG00000053497) ENSBTAG00000047449 ENSBTAG00000039981 ENSBTAG00000047816 ATOH8 (ENSBTAG00000024000) #29 ST3GAL5 (ENSBTAG00000011601) #31 POLR1A (ENSBTAG00000006481) #32 PTCD3 (ENSBTAG00000006482) #33 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00390000016950.g ENSGT00920000149138 #32 ENSGT00390000016876.e #33 ENSGT00390000016876.f #33 ENSGT00390000002313 #34 Wild yak MODERN SPECIES 422 TMSB10 (ENSBMUG00000025623) KCMF1 (ENSBMUG00000025612) #13 TCF7L1 (ENSBMUG00000025596) #14 ENSBMUG00000025576 #15 RETSAT (ENSBMUG00000025572) #16 ELMOD3 (ENSBMUG00000025564) #17 CAPG (ENSBMUG00000025555) #18 ENSBMUG00000025549 MAT2A (ENSBMUG00000025546) #20 GGCX (ENSBMUG00000025542) #21 VAMP8 (ENSBMUG00000025534) #22 VAMP5 (ENSBMUG00000025532) #23 RNF181 (ENSBMUG00000025527) #24 TMEM150A (ENSBMUG00000025520) #25 C2orf68 (ENSBMUG00000025510) #26 USP39 (ENSBMUG00000025495) #27 SFTPB (ENSBMUG00000025482) #28 ENSBMUG00000025477 Domestic yak MODERN SPECIES 28 ENSBGRG00000006853 ENSBGRG00000006831 SUCLG1 (ENSBGRG00000006774) #10 DNAH6 (ENSBGRG00000006436) #11 TMSB10 (ENSBGRG00000006399) KCMF1 (ENSBGRG00000006294) #13 ENSBGRG00000006276 TCF7L1 (ENSBGRG00000006205) #14 ENSBGRG00000006196 #15 RETSAT (ENSBGRG00000006129) #16 ELMOD3 (ENSBGRG00000005978) #17 CAPG (ENSBGRG00000005930) #18 SH2D6 (ENSBGRG00000005852) #19 MAT2A (ENSBGRG00000005776) #20 GGCX (ENSBGRG00000005624) #21 VAMP8 (ENSBGRG00000005579) #22 VAMP5 (ENSBGRG00000005556) #23 RNF181 (ENSBGRG00000005520) #24 TMEM150A (ENSBGRG00000005475) #25 C2orf68 (ENSBGRG00000005435) #26 USP39 (ENSBGRG00000004978) #27 SFTPB (ENSBGRG00000004867) #28 ENSBGRG00000004844 ENSBGRG00000004722 ATOH8 (ENSBGRG00000004693) #29 ST3GAL5 (ENSBGRG00000004605) #31 ENSBGRG00000004581 POLR1A (ENSBGRG00000004230) #32 ENSBGRG00000004172 #33 ENSBGRG00000004052 #33 IMMT (ENSBGRG00000003684) #34 American bison MODERN SPECIES 3338 SUCLG1 (ENSBBBG00000020010) #10 DNAH6 (ENSBBBG00000019994) #11 TMSB10 (ENSBBBG00000019860) ENSBBBG00000019847 #13 TCF7L1 (ENSBBBG00000019828) #14 ENSBBBG00000019799 #15 RETSAT (ENSBBBG00000019791) #16 ELMOD3 (ENSBBBG00000019773) #17 CAPG (ENSBBBG00000005165) #18 ENSBBBG00000019725 #19 MAT2A (ENSBBBG00000019713) #20 GGCX (ENSBBBG00000019704) #21 VAMP8 (ENSBBBG00000007673) #22 VAMP5 (ENSBBBG00000019660) #23 RNF181 (ENSBBBG00000005186) #24 TMEM150A (ENSBBBG00000019657) #25 USP39 (ENSBBBG00000019591) #27 SFTPB (ENSBBBG00000005209) #28 ENSBBBG00000019476 ENSBBBG00000005222 ENSBBBG00000006905 ATOH8 (ENSBBBG00000005211) #29 ST3GAL5 (ENSBBBG00000019418) #31 ENSBBBG00000019343 POLR1A (ENSBBBG00000007513) #32 PTCD3 (ENSBBBG00000007099) #33 IMMT (ENSBBBG00000019237) #34 MRPL35 (ENSBBBG00000019211) #35 Siberian musk deer MODERN SPECIES 243 ENSMMSG00000010974 SUCLG1 (ENSMMSG00000011015) #10 DNAH6 (ENSMMSG00000011077) #11 ENSMMSG00000011387 #12 KCMF1 (ENSMMSG00000011415) #13 TCF7L1 (ENSMMSG00000011504) #14 ENSMMSG00000011551 RETSAT (ENSMMSG00000011571) #16 ELMOD3 (ENSMMSG00000011616) #17 CAPG (ENSMMSG00000011668) #18 SH2D6 (ENSMMSG00000011734) #19 ENSMMSG00000011818 #20 GGCX (ENSMMSG00000011896) #21 VAMP8 (ENSMMSG00000011993) #22 VAMP5 (ENSMMSG00000012013) #23 RNF181 (ENSMMSG00000012036) #24 TMEM150A (ENSMMSG00000012073) #25 C2orf68 (ENSMMSG00000012110) #26 USP39 (ENSMMSG00000012147) #27 SFTPB (ENSMMSG00000012359) #28 ENSMMSG00000012385 ATOH8 (ENSMMSG00000012402) #29 ST3GAL5 (ENSMMSG00000012427) #31 POLR1A (ENSMMSG00000012542) #32 PTCD3 (ENSMMSG00000012741) #33 IMMT (ENSMMSG00000012806) #34 MRPL35 (ENSMMSG00000012898) #35 REEP1 (ENSMMSG00000012954) #36 KDM3A (ENSMMSG00000013019) #37 Yarkand deer MODERN SPECIES 2 CTNNA2 (ENSCHYG00000011228) ENSCHYG00000011081 SUCLG1 (ENSCHYG00000010947) #10 DNAH6 (ENSCHYG00000010726) #11 TMSB10 (ENSCHYG00000010662) KCMF1 (ENSCHYG00000010620) #13 TCF7L1 (ENSCHYG00000010256) #14 ENSCHYG00000010219 #15 ENSCHYG00000010201 RETSAT (ENSCHYG00000010029) #16 ELMOD3 (ENSCHYG00000009802) #17 ENSCHYG00000009746 #18 ENSCHYG00000009409 #19 MAT2A (ENSCHYG00000009334) #20 GGCX (ENSCHYG00000009020) #21 VAMP8 (ENSCHYG00000008959) #22 RNF181 (ENSCHYG00000008920) #24 TMEM150A (ENSCHYG00000008687) #25 C2orf68 (ENSCHYG00000008648) #26 USP39 (ENSCHYG00000008478) #27 SFTPB (ENSCHYG00000008422) #28 ENSCHYG00000008369 ENSCHYG00000008347 ATOH8 (ENSCHYG00000008328) #29 ST3GAL5 (ENSCHYG00000008185) #31 POLR1A (ENSCHYG00000007959) #32 PTCD3 (ENSCHYG00000007717) #33 IMMT (ENSCHYG00000007615) #34 MRPL35 (ENSCHYG00000007551) #35 REEP1 (ENSCHYG00000007409) #36 KDM3A (ENSCHYG00000007307) #37 Cetacea ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Odontoceti ANCESTRAL SPECIES 15 ENSGT01000000219921 ENSGT00550000074828.a.g.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00940000154519.d ENSGT01000000219921 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Odontoceti_b ANCESTRAL SPECIES 15 ENSGT01000000219921 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000165681.d #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000154519.d ENSGT01000000219921 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000165681.d #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00940000165659.a ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Narwhal MODERN SPECIES 305 ENSMMNG00015006568 ENSMMNG00015006559 SUCLG1 (ENSMMNG00015006541) #10 DNAH6 (ENSMMNG00015006430) #11 ENSMMNG00015006372 TMSB10 (ENSMMNG00015006357) KCMF1 (ENSMMNG00015006344) #13 TCF7L1 (ENSMMNG00015006319) #14 ENSMMNG00015006302 #15 RETSAT (ENSMMNG00015006280) #16 ELMOD3 (ENSMMNG00015006250) #17 CAPG (ENSMMNG00015006216) #18 SH2D6 (ENSMMNG00015006178) #19 MAT2A (ENSMMNG00015006153) #20 GGCX (ENSMMNG00015006106) #21 VAMP8 (ENSMMNG00015006072) #22 VAMP5 (ENSMMNG00015006056) #23 RNF181 (ENSMMNG00015006028) #24 TMEM150A (ENSMMNG00015005993) #25 C2orf68 (ENSMMNG00015005970) #26 USP39 (ENSMMNG00015005861) #27 SFTPB (ENSMMNG00015005711) #28 ATOH8 (ENSMMNG00015005651) #29 ST3GAL5 (ENSMMNG00015005607) #31 ENSMMNG00015005573 POLR1A (ENSMMNG00015005538) #32 PTCD3 (ENSMMNG00015005490) #33 IMMT (ENSMMNG00015005456) #34 MRPL35 (ENSMMNG00015005420) #35 REEP1 (ENSMMNG00015005391) #36 KDM3A (ENSMMNG00015005358) #37 Beluga whale MODERN SPECIES 61 CTNNA2 (ENSDLEG00000015448) ENSDLEG00000015731 ENSDLEG00000015822 SUCLG1 (ENSDLEG00000015835) #10 DNAH6 (ENSDLEG00000015865) #11 ENSDLEG00000015940 #12 KCMF1 (ENSDLEG00000015950) #13 TCF7L1 (ENSDLEG00000016012) #14 ENSDLEG00000016031 #15 RETSAT (ENSDLEG00000016040) #16 ELMOD3 (ENSDLEG00000016055) #17 CAPG (ENSDLEG00000016089) #18 ENSDLEG00000016109 MAT2A (ENSDLEG00000016119) #20 GGCX (ENSDLEG00000016129) #21 VAMP8 (ENSDLEG00000016147) #22 VAMP5 (ENSDLEG00000016153) #23 RNF181 (ENSDLEG00000016163) #24 TMEM150A (ENSDLEG00000016207) #25 CUNH2orf68 (ENSDLEG00000016225) #26 USP39 (ENSDLEG00000016236) #27 ENSDLEG00000016291 #28 ATOH8 (ENSDLEG00000016446) #29 ST3GAL5 (ENSDLEG00000016463) #31 ENSDLEG00000016502 POLR1A (ENSDLEG00000016519) #32 PTCD3 (ENSDLEG00000016579) #33 IMMT (ENSDLEG00000016629) #34 MRPL35 (ENSDLEG00000016654) #35 REEP1 (ENSDLEG00000016669) #36 KDM3A (ENSDLEG00000016750) #37 Dolphin MODERN SPECIES 1097 TCF7L1 (ENSTTRG00000008959) #14 RETSAT (ENSTTRG00000008962) #16 ENSTTRG00000008963 #17 CAPG (ENSTTRG00000008964) #18 ENSTTRG00000008965 #19 MAT2A (ENSTTRG00000008966) #20 GGCX (ENSTTRG00000008967) #21 VAMP8 (ENSTTRG00000008968) #22 VAMP5 (ENSTTRG00000008969) #23 RNF181 (ENSTTRG00000008970) #24 TMEM150A (ENSTTRG00000008971) #25 C2orf68 (ENSTTRG00000008972) #26 USP39 (ENSTTRG00000008973) #27 SFTPB (ENSTTRG00000008974) #28 Sperm whale MODERN SPECIES 531 VAMP8 (ENSPCTG00005021132) #22 VAMP5 (ENSPCTG00005021120) #23 RNF181 (ENSPCTG00005021092) #24 CUNH2orf68 (ENSPCTG00005021019) #25 Blue whale MODERN SPECIES 4 CTNNA2 (ENSBMSG00010019658) ENSBMSG00010019485 SUCLG1 (ENSBMSG00010019445) #10 DNAH6 (ENSBMSG00010018565) #11 ENSBMSG00010018427 TRABD2A (ENSBMSG00010018310) TMSB10 (ENSBMSG00010018283) KCMF1 (ENSBMSG00010018181) #13 TCF7L1 (ENSBMSG00010018055) #14 RETSAT (ENSBMSG00010018024) #16 ELMOD3 (ENSBMSG00010017999) #17 CAPG (ENSBMSG00010017946) #18 SH2D6 (ENSBMSG00010017841) #19 MAT2A (ENSBMSG00010017771) #20 GGCX (ENSBMSG00010017708) #21 VAMP8 (ENSBMSG00010017652) #22 VAMP5 (ENSBMSG00010017623) #23 RNF181 (ENSBMSG00010017562) #24 TMEM150A (ENSBMSG00010017376) #25 C2orf68 (ENSBMSG00010017326) #26 USP39 (ENSBMSG00010017135) #27 ENSBMSG00010017087 #28 ENSBMSG00010017048 #28 ATOH8 (ENSBMSG00010017024) #29 ST3GAL5 (ENSBMSG00010016994) #31 ENSBMSG00010016964 ENSBMSG00010016939 POLR1A (ENSBMSG00010016886) #32 PTCD3 (ENSBMSG00010016832) #33 IMMT (ENSBMSG00010016688) #34 MRPL35 (ENSBMSG00010016621) #35 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Carnivora ANCESTRAL SPECIES 19 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Caniformia ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Canidae DUPLICATION Canidae ANCESTRAL SPECIES 25 ENSGT00940000161705 ENSGT00940000164757 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b.c #22 ENSGT00730000111371.c #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.c ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000161705 ENSGT00940000164757 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b.c #22 ENSGT00730000111371.c #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.c ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Dog MODERN SPECIES 8 ENSCAFG00845014940 SUCLG1 (ENSCAFG00845014907) #10 ENSCAFG00845014884 DNAH6 (ENSCAFG00845014818) #11 TRABD2A (ENSCAFG00845014743) ENSCAFG00845014717 ENSCAFG00845014677 #13 TCF7L1 (ENSCAFG00845014626) #14 ENSCAFG00845014600 #15 RETSAT (ENSCAFG00845014569) #16 ELMOD3 (ENSCAFG00845014524) #17 CAPG (ENSCAFG00845014410) #18 SH2D6 (ENSCAFG00845014343) #19 MAT2A (ENSCAFG00845014310) #20 GGCX (ENSCAFG00845014233) #21 VAMP8 (ENSCAFG00845014183) #22 VAMP5 (ENSCAFG00845014173) #23 RNF181 (ENSCAFG00845014162) #24 TMEM150A (ENSCAFG00845014140) #25 C17H2orf68 (ENSCAFG00845014119) #26 USP39 (ENSCAFG00845014083) #27 SFTPB (ENSCAFG00845014035) #28 ENSCAFG00845013982 ENSCAFG00845013890 ATOH8 (ENSCAFG00845013832) #29 ST3GAL5 (ENSCAFG00845013809) #31 POLR1A (ENSCAFG00845013628) #32 PTCD3 (ENSCAFG00845013553) #33 IMMT (ENSCAFG00845013443) #34 MRPL35 (ENSCAFG00845013398) #35 REEP1 (ENSCAFG00845013348) #36 Dingo MODERN SPECIES 223 DNAH6 (ENSCAFG00020014555) #11 ENSCAFG00020014589 TRABD2A (ENSCAFG00020014595) ENSCAFG00020014598 ENSCAFG00020014600 ENSCAFG00020014601 #13 ENSCAFG00020014602 #13 TCF7L1 (ENSCAFG00020014607) #14 ENSCAFG00020014645 #15 RETSAT (ENSCAFG00020014651) #16 ELMOD3 (ENSCAFG00020014656) #17 CAPG (ENSCAFG00020014661) #18 ENSCAFG00020014664 #19 MAT2A (ENSCAFG00020014669) #20 GGCX (ENSCAFG00020014674) #21 ENSCAFG00020014679 #22 ENSCAFG00020014680 #23 RNF181 (ENSCAFG00020014682) #24 TMEM150A (ENSCAFG00020014685) #25 C2orf68 (ENSCAFG00020014687) #26 USP39 (ENSCAFG00020014690) #27 SFTPB (ENSCAFG00020014705) #28 ENSCAFG00020014715 ATOH8 (ENSCAFG00020014718) #29 ST3GAL5 (ENSCAFG00020014720) #31 POLR1A (ENSCAFG00020014752) #32 PTCD3 (ENSCAFG00020015827) #33 IMMT (ENSCAFG00020015997) #34 MRPL35 (ENSCAFG00020016017) #35 REEP1 (ENSCAFG00020016020) #36 KDM3A (ENSCAFG00020016056) #37 Red fox MODERN SPECIES 16 LRRTM1 (ENSVVUG00000003240) CTNNA2 (ENSVVUG00000003221) ENSVVUG00000003155 SUCLG1 (ENSVVUG00000003108) #10 DNAH6 (ENSVVUG00000002546) #11 TRABD2A (ENSVVUG00000002449) KCMF1 (ENSVVUG00000002440) #13 TCF7L1 (ENSVVUG00000001883) #14 TGOLN2 (ENSVVUG00000001860) #15 RETSAT (ENSVVUG00000001843) #16 ELMOD3 (ENSVVUG00000001825) #17 CAPG (ENSVVUG00000001799) #18 ENSVVUG00000001782 #19 MAT2A (ENSVVUG00000001771) #20 GGCX (ENSVVUG00000001756) #21 VAMP8 (ENSVVUG00000001728) #22 ENSVVUG00000001721 #23 RNF181 (ENSVVUG00000001710) #24 TMEM150A (ENSVVUG00000001694) #25 CUNH2orf68 (ENSVVUG00000001683) #26 USP39 (ENSVVUG00000001660) #27 SFTPB (ENSVVUG00000001389) #28 ENSVVUG00000001345 ENSVVUG00000001338 ATOH8 (ENSVVUG00000001304) #29 ST3GAL5 (ENSVVUG00000001293) #31 POLR1A (ENSVVUG00000001245) #32 PTCD3 (ENSVVUG00000001203) #33 IMMT (ENSVVUG00000000129) #34 MRPL35 (ENSVVUG00000000063) #35 REEP1 (ENSVVUG00000028774) #36 Canidae ANCESTRAL SPECIES ENSGT00940000160325.b.d #22 Canis_lupus ANCESTRAL SPECIES 30 ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT00940000155440.d.j ENSGT01030000234574.B.c.a ENSGT00530000063424.b ENSGT00390000003791 ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00940000153771.B ENSGT00940000156240.f ENSGT00940000165276 ENSGT00940000157329 ENSGT00940000160325.b.d #22 ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ##25 ENSGT00440000039914 ENSGT00940000154426.b.b.x.a ENSGT00940000158010 ENSGT00390000016988.a.a.a.a.a.a.b.b ENSGT00940000155816.b ENSGT00940000159393 ENSGT00940000159775 ENSGT00390000016547 ENSGT00940000158449 Dog MODERN SPECIES 25 WDFY3 (ENSCAFG00845022217) CDS1 (ENSCAFG00845022114) ENSCAFG00845022070 NKX6-1 (ENSCAFG00845022031) ENSCAFG00845022001 GPAT3 (ENSCAFG00845021887) ABRAXAS1 (ENSCAFG00845021759) MRPS18C (ENSCAFG00845021626) ENSCAFG00845021572 ENSCAFG00845021505 HPSE (ENSCAFG00845021381) COQ2 (ENSCAFG00845021322) ENSCAFG00845021294 ENSCAFG00845021212 PLAC8B (ENSCAFG00845021150) ENSCAFG00845021087 #22 LIN54 (ENSCAFG00845020955) THAP9 (ENSCAFG00845020757) SEC31A (ENSCAFG00845019603) SCD5 (ENSCAFG00845019428) ENSCAFG00845019398 TMEM150C (ENSCAFG00845019337) ##25 ENOPH1 (ENSCAFG00845019277) HNRNPDL (ENSCAFG00845018924) HNRNPD (ENSCAFG00845018743) ENSCAFG00845018639 RASGEF1B (ENSCAFG00845018382) PRKG2 (ENSCAFG00845018088) BMP3 (ENSCAFG00845017996) CFAP299 (ENSCAFG00845017920) FGF5 (ENSCAFG00845017837) Dingo MODERN SPECIES 342 MAPK10 (ENSCAFG00020009946) ARHGAP24 (ENSCAFG00020010087) WDFY3 (ENSCAFG00020010121) CDS1 (ENSCAFG00020010454) NKX6-1 (ENSCAFG00020010474) ENSCAFG00020010476 GPAT3 (ENSCAFG00020010481) ABRAXAS1 (ENSCAFG00020010484) MRPS18C (ENSCAFG00020010491) HELQ (ENSCAFG00020010495) HPSE (ENSCAFG00020010498) COQ2 (ENSCAFG00020010543) ENSCAFG00020010561 ENSCAFG00020010564 PLAC8 (ENSCAFG00020010575) ENSCAFG00020010578 #22 COPS4 (ENSCAFG00020010592) LIN54 (ENSCAFG00020010600) ENSCAFG00020010647 SEC31A (ENSCAFG00020010660) SCD5 (ENSCAFG00020010695) TMEM150C (ENSCAFG00020010697) ##25 ENOPH1 (ENSCAFG00020010698) HNRNPDL (ENSCAFG00020010699) HNRNPD (ENSCAFG00020010713) ENSCAFG00020010723 ENSCAFG00020010724 RASGEF1B (ENSCAFG00020010726) PRKG2 (ENSCAFG00020010735) BMP3 (ENSCAFG00020010793) ENSCAFG00020010807 Caniformia_b ANCESTRAL SPECIES 11 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Ursidae ANCESTRAL SPECIES 9 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000165681 #12 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305.b #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Ursus ANCESTRAL SPECIES 55 ENSGT00940000162300.n ENSGT00940000162300.m ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305.b #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Polar bear MODERN SPECIES 223 ENSUMAG00000006060 LRRTM1 (ENSUMAG00000006088) ENSUMAG00000006122 ENSUMAG00000006177 SUCLG1 (ENSUMAG00000006187) #10 DNAH6 (ENSUMAG00000006234) #11 KCMF1 (ENSUMAG00000006381) #13 TCF7L1 (ENSUMAG00000006395) #14 ENSUMAG00000006403 #15 RETSAT (ENSUMAG00000006406) #16 ELMOD3 (ENSUMAG00000006414) #17 CAPG (ENSUMAG00000006430) #18 ENSUMAG00000006447 #19 MAT2A (ENSUMAG00000006459) #20 GGCX (ENSUMAG00000006501) #21 VAMP8 (ENSUMAG00000006509) #22 ENSUMAG00000006511 #23 RNF181 (ENSUMAG00000006514) #24 TMEM150A (ENSUMAG00000006515) #25 C2orf68 (ENSUMAG00000006518) #26 USP39 (ENSUMAG00000006527) #27 SFTPB (ENSUMAG00000006563) #28 ENSUMAG00000006576 ST3GAL5 (ENSUMAG00000006591) #31 POLR1A (ENSUMAG00000006700) #32 PTCD3 (ENSUMAG00000007839) #33 IMMT (ENSUMAG00000007873) #34 MRPL35 (ENSUMAG00000007891) #35 REEP1 (ENSUMAG00000007896) #36 KDM3A (ENSUMAG00000007948) #37 CHMP3 (ENSUMAG00000007971) American black bear MODERN SPECIES 520 KCMF1 (ENSUAMG00000027562) #13 TCF7L1 (ENSUAMG00000027565) #14 ENSUAMG00000027574 #15 RETSAT (ENSUAMG00000027577) #16 ELMOD3 (ENSUAMG00000027578) #17 CAPG (ENSUAMG00000027580) #18 ENSUAMG00000027581 #19 MAT2A (ENSUAMG00000027582) #20 GGCX (ENSUAMG00000027583) #21 VAMP8 (ENSUAMG00000027584) #22 VAMP5 (ENSUAMG00000027585) #23 RNF181 (ENSUAMG00000027586) #24 TMEM150A (ENSUAMG00000027587) #25 C2orf68 (ENSUAMG00000027589) #26 USP39 (ENSUAMG00000027590) #27 SFTPB (ENSUAMG00000027593) #28 Giant Panda MODERN SPECIES 14 ENSAMEG00000030394 CTNNA2 (ENSAMEG00000010800) LRRTM1 (ENSAMEG00000019333) ENSAMEG00000018718 SUCLG1 (ENSAMEG00000001962) #10 DNAH6 (ENSAMEG00000002004) #11 TRABD2A (ENSAMEG00000002027) TCF7L1 (ENSAMEG00000002051) #14 ENSAMEG00000031071 #15 RETSAT (ENSAMEG00000002091) #16 ENSAMEG00000002137 #17 CAPG (ENSAMEG00000002173) #18 ENSAMEG00000028845 #19 MAT2A (ENSAMEG00000002191) #20 GGCX (ENSAMEG00000002214) #21 VAMP8 (ENSAMEG00000002268) #22 VAMP5 (ENSAMEG00000031349) #23 USP39 (ENSAMEG00000002291) #27 ENSAMEG00000002282 #25 C2orf68 (ENSAMEG00000002290) #26 SFTPB (ENSAMEG00000002317) #28 ATOH8 (ENSAMEG00000025438) #29 ST3GAL5 (ENSAMEG00000005791) #31 POLR1A (ENSAMEG00000005807) #32 PTCD3 (ENSAMEG00000005861) #33 IMMT (ENSAMEG00000005919) #34 MRPL35 (ENSAMEG00000005978) #35 REEP1 (ENSAMEG00000024084) #36 KDM3A (ENSAMEG00000009939) #37 CHMP3 (ENSAMEG00000009971) RNF103 (ENSAMEG00000009973) Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Ferret MODERN SPECIES 169 ENSMPUG00000008534 LRRTM1 (ENSMPUG00000018841) ENSMPUG00000008539 SUCLG1 (ENSMPUG00000008566) #10 DNAH6 (ENSMPUG00000008574) #11 TRABD2A (ENSMPUG00000008622) KCMF1 (ENSMPUG00000008632) #13 TCF7L1 (ENSMPUG00000008657) #14 ENSMPUG00000008755 #15 RETSAT (ENSMPUG00000008763) #16 ELMOD3 (ENSMPUG00000008834) #17 CAPG (ENSMPUG00000008841) #18 SH2D6 (ENSMPUG00000008909) #19 MAT2A (ENSMPUG00000008933) #20 GGCX (ENSMPUG00000009028) #21 VAMP8 (ENSMPUG00000009038) #22 VAMP5 (ENSMPUG00000009046) #23 RNF181 (ENSMPUG00000009053) #24 TMEM150A (ENSMPUG00000009058) #25 C2orf68 (ENSMPUG00000009069) #26 USP39 (ENSMPUG00000009096) #27 SFTPB (ENSMPUG00000009109) #28 ENSMPUG00000009117 ATOH8 (ENSMPUG00000009121) #29 ST3GAL5 (ENSMPUG00000009127) #31 POLR1A (ENSMPUG00000009135) #32 PTCD3 (ENSMPUG00000009167) #33 IMMT (ENSMPUG00000009193) #34 MRPL35 (ENSMPUG00000009217) #35 REEP1 (ENSMPUG00000009225) #36 KDM3A (ENSMPUG00000009253) #37 American mink MODERN SPECIES 8 LRRTM1 (ENSNVIG00000019580) CTNNA2 (ENSNVIG00000019316) SUCLG1 (ENSNVIG00000019244) #10 DNAH6 (ENSNVIG00000019022) #11 TRABD2A (ENSNVIG00000018979) TMSB10 (ENSNVIG00000018969) KCMF1 (ENSNVIG00000018936) #13 TCF7L1 (ENSNVIG00000018900) #14 ENSNVIG00000018872 #15 RETSAT (ENSNVIG00000018862) #16 ELMD3 (ENSNVIG00000018754) #17 CAPG (ENSNVIG00000018696) #18 ENSNVIG00000018664 #19 MAT2A (ENSNVIG00000018646) #20 GGCX (ENSNVIG00000018617) #21 VAMP8 (ENSNVIG00000018603) #22 VAMP5 (ENSNVIG00000018599) #23 RNF181 (ENSNVIG00000018591) #24 TMEM150A (ENSNVIG00000018553) #25 C2orf68 (ENSNVIG00000018547) #26 ENSNVIG00000018464 #27 SFTPB (ENSNVIG00000018449) #28 ATOH8 (ENSNVIG00000018445) #29 ST3GAL5 (ENSNVIG00000018397) #31 POLR1A (ENSNVIG00000018346) #32 PTCD3 (ENSNVIG00000018319) #33 IMMT (ENSNVIG00000018239) #34 MRPL35 (ENSNVIG00000018218) #35 REEP1 (ENSNVIG00000018129) #36 KDM3A (ENSNVIG00000018097) #37 CHMP3 (ENSNVIG00000018078) Felidae ANCESTRAL SPECIES 3 ENSGT00940000161705 ENSGT00940000154818.a.b ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.k #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Panthera ANCESTRAL SPECIES 2 ENSGT01030000234543.A.a ENSGT00940000154818.a.b ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.k #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Tiger MODERN SPECIES 170 KCMF1 (ENSPTIG00000012661) #13 TCF7L1 (ENSPTIG00000012726) #14 ENSPTIG00000012874 #15 RETSAT (ENSPTIG00000012901) #16 ELMOD3 (ENSPTIG00000012942) #17 CAPG (ENSPTIG00000013355) #18 ENSPTIG00000013587 #19 MAT2A (ENSPTIG00000013684) #20 GGCX (ENSPTIG00000013923) #21 VAMP8 (ENSPTIG00000014405) #22 VAMP5 (ENSPTIG00000014511) #23 RNF181 (ENSPTIG00000014685) #24 TMEM150A (ENSPTIG00000015089) #25 C2orf68 (ENSPTIG00000015638) #26 USP39 (ENSPTIG00000015767) #27 SFTPB (ENSPTIG00000016782) #28 ST3GAL5 (ENSPTIG00000017771) #31 POLR1A (ENSPTIG00000018783) #32 PTCD3 (ENSPTIG00000019091) #33 IMMT (ENSPTIG00000019189) #34 ENSPTIG00000019867 #35 REEP1 (ENSPTIG00000020564) #36 KDM3A (ENSPTIG00000003722) #37 CHMP3 (ENSPTIG00000008355) RNF103 (ENSPTIG00000008667) Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547.k #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C leopard MODERN SPECIES ENSPPRG00000007459 ENSPPRG00000007449 ENSPPRG00000020355 SUCLG1 (ENSPPRG00000007440) #10 DNAH6 (ENSPPRG00000007406) #11 TRABD2A (ENSPPRG00000007266) KCMF1 (ENSPPRG00000007234) #13 TCF7L1 (ENSPPRG00000007227) #14 ENSPPRG00000007210 #15 RETSAT (ENSPPRG00000007198) #16 ELMOD3 (ENSPPRG00000007176) #17 CAPG (ENSPPRG00000007161) #18 ENSPPRG00000007139 #19 MAT2A (ENSPPRG00000007128) #20 GGCX (ENSPPRG00000007103) #21 VAMP8 (ENSPPRG00000007071) #22 VAMP5 (ENSPPRG00000007056) #23 RNF181 (ENSPPRG00000007048) #24 TMEM150A (ENSPPRG00000007030) #25 C2orf68 (ENSPPRG00000006996) #26 USP39 (ENSPPRG00000006971) #27 SFTPB (ENSPPRG00000006829) #28 ATOH8 (ENSPPRG00000006780) #29 ST3GAL5 (ENSPPRG00000006759) #31 POLR1A (ENSPPRG00000006702) #32 PTCD3 (ENSPPRG00000006644) #33 IMMT (ENSPPRG00000006625) #34 ENSPPRG00000006561 #35 REEP1 (ENSPPRG00000006542) #36 KDM3A (ENSPPRG00000006509) #37 CHMP3 (ENSPPRG00000006445) lion MODERN SPECIES 3 ENSPLOG00000002329 ENSPLOG00000002306 SUCLG1 (ENSPLOG00000002282) #10 DNAH6 (ENSPLOG00000002257) #11 TRABD2A (ENSPLOG00000002215) TMSB10 (ENSPLOG00000002183) KCMF1 (ENSPLOG00000002171) #13 TCF7L1 (ENSPLOG00000002149) #14 ENSPLOG00000002132 #15 RETSAT (ENSPLOG00000002122) #16 ELMOD3 (ENSPLOG00000002100) #17 CAPG (ENSPLOG00000002073) #18 SH2D6 (ENSPLOG00000002043) #19 MAT2A (ENSPLOG00000002012) #20 GGCX (ENSPLOG00000001958) #21 VAMP8 (ENSPLOG00000001925) #22 VAMP5 (ENSPLOG00000001920) #23 RNF181 (ENSPLOG00000001904) #24 TMEM150A (ENSPLOG00000001876) #25 C2orf68 (ENSPLOG00000001851) #26 USP39 (ENSPLOG00000001816) #27 SFTPB (ENSPLOG00000001786) #28 ATOH8 (ENSPLOG00000001776) #29 ST3GAL5 (ENSPLOG00000001752) #31 POLR1A (ENSPLOG00000001675) #32 PTCD3 (ENSPLOG00000001609) #33 IMMT (ENSPLOG00000001563) #34 MRPL35 (ENSPLOG00000001537) #35 REEP1 (ENSPLOG00000001464) #36 KDM3A (ENSPLOG00000001402) #37 CHMP3 (ENSPLOG00000001384) Cat MODERN SPECIES 2 ENSFCAG00000039414 ENSFCAG00000031148 SUCLG1 (ENSFCAG00000005140) #10 DNAH6 (ENSFCAG00000000768) #11 TRABD2A (ENSFCAG00000000770) TMSB10 (ENSFCAG00000046545) KCMF1 (ENSFCAG00000044295) #13 TCF7L1 (ENSFCAG00000003376) #14 ENSFCAG00000037179 #15 RETSAT (ENSFCAG00000003377) #16 ELMOD3 (ENSFCAG00000003378) #17 CAPG (ENSFCAG00000003379) #18 SH2D6 (ENSFCAG00000003381) #19 MAT2A (ENSFCAG00000011965) #20 GGCX (ENSFCAG00000011967) #21 VAMP8 (ENSFCAG00000011968) #22 VAMP5 (ENSFCAG00000024700) #23 RNF181 (ENSFCAG00000011969) #24 TMEM150A (ENSFCAG00000024246) #25 CA3H2orf68 (ENSFCAG00000028683) #26 USP39 (ENSFCAG00000011972) #27 SFTPB (ENSFCAG00000018868) #28 ATOH8 (ENSFCAG00000038037) #29 ST3GAL5 (ENSFCAG00000015447) #31 POLR1A (ENSFCAG00000008966) #32 PTCD3 (ENSFCAG00000008967) #33 IMMT (ENSFCAG00000008968) #34 ENSFCAG00000040448 #35 REEP1 (ENSFCAG00000008970) #36 KDM3A (ENSFCAG00000010506) #37 CHMP3 (ENSFCAG00000039184) Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Chiroptera ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a ENSGT00940000160433.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160433.a ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Microbat MODERN SPECIES 1706 MAT2A (ENSMLUG00000005348) #20 GGCX (ENSMLUG00000005356) #21 VAMP8 (ENSMLUG00000005363) #22 VAMP5 (ENSMLUG00000028456) #23 RNF181 (ENSMLUG00000027738) #24 TMEM150A (ENSMLUG00000026810) #25 C2orf68 (ENSMLUG00000005365) #26 USP39 (ENSMLUG00000005367) #27 SFTPB (ENSMLUG00000005372) #28 ENSMLUG00000001579 Greater horseshoe bat MODERN SPECIES 4 CTNNA2 (ENSRFEG00010013591) ENSRFEG00010013508 SUCLG1 (ENSRFEG00010013453) #10 DNAH6 (ENSRFEG00010012455) #11 TMSB10 (ENSRFEG00010012256) KCMF1 (ENSRFEG00010012206) #13 ENSRFEG00010012190 TCF7L1 (ENSRFEG00010012140) #14 ENSRFEG00010012085 #15 RETSAT (ENSRFEG00010012053) #16 ELMOD3 (ENSRFEG00010011983) #17 CAPG (ENSRFEG00010011887) #18 ENSRFEG00010011863 MAT2A (ENSRFEG00010011814) #20 GGCX (ENSRFEG00010011702) #21 VAMP8 (ENSRFEG00010011634) #22 ENSRFEG00010011487 #23 TMEM150A (ENSRFEG00010011398) #25 C2orf68 (ENSRFEG00010011347) #26 USP39 (ENSRFEG00010010822) #27 SFTPB (ENSRFEG00010010754) #28 ENSRFEG00010010730 ATOH8 (ENSRFEG00010010652) #29 ST3GAL5 (ENSRFEG00010010531) #31 POLR1A (ENSRFEG00010010422) #32 PTCD3 (ENSRFEG00010010292) #33 IMMT (ENSRFEG00010009645) #34 MRPL35 (ENSRFEG00010009536) #35 REEP1 (ENSRFEG00010009322) #36 KDM3A (ENSRFEG00010009255) #37 CHMP3 (ENSRFEG00010009136) Megabat MODERN SPECIES 2127 MAT2A (ENSPVAG00000015346) #20 GGCX (ENSPVAG00000015347) #21 VAMP8 (ENSPVAG00000015348) #22 VAMP5 (ENSPVAG00000015351) #23 RNF181 (ENSPVAG00000015352) #24 TMEM150A (ENSPVAG00000015354) #25 C2orf68 (ENSPVAG00000015355) #26 USP39 (ENSPVAG00000015356) #27 SFTPB (ENSPVAG00000015359) #28 ENSPVAG00000015360 Equus ANCESTRAL SPECIES 7 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000162805 ENSGT00940000165681 #12 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Horse MODERN SPECIES 6 ENSECAG00000046045 #10 ENSECAG00000057371 #10 ENSECAG00000059635 #10 DNAH6 (ENSECAG00000011573) #11 ENSECAG00000038584 KCMF1 (ENSECAG00000024834) #13 TRABD2A (ENSECAG00000010499) TCF7L1 (ENSECAG00000022931) #14 ENSECAG00000037048 #15 RETSAT (ENSECAG00000010342) #16 ELMOD3 (ENSECAG00000020629) #17 CAPG (ENSECAG00000015128) #18 SH2D6 (ENSECAG00000013097) #19 MAT2A (ENSECAG00000007391) #20 GGCX (ENSECAG00000010458) #21 VAMP8 (ENSECAG00000009514) #22 VAMP5 (ENSECAG00000007788) #23 RNF181 (ENSECAG00000000327) TMEM150A (ENSECAG00000017462) #25 USP39 (ENSECAG00000002856) #27 SFTPB (ENSECAG00000019375) #28 GNLY (ENSECAG00000015819) ATOH8 (ENSECAG00000039231) #29 ST3GAL5 (ENSECAG00000011464) #31 POLR1A (ENSECAG00000010092) #32 PTCD3 (ENSECAG00000020623) #33 ENSECAG00000048487 IMMT (ENSECAG00000024569) #34 MRPL35 (ENSECAG00000048642) #35 REEP1 (ENSECAG00000024247) #36 KDM3A (ENSECAG00000007369) #37 Donkey MODERN SPECIES 26 ENSEASG00005001226 SUCLG1 (ENSEASG00005001258) #10 DNAH6 (ENSEASG00005001279) #11 TRABD2A (ENSEASG00005001397) ENSEASG00005032677 #12 ENSEASG00005001404 #13 ENSEASG00005030964 #13 TCF7L1 (ENSEASG00005001412) #14 ENSEASG00005001427 #15 RETSAT (ENSEASG00005027102) #16 ENSEASG00005001441 #17 CAPG (ENSEASG00005001445) #18 SH2D6 (ENSEASG00005001453) #19 MAT2A (ENSEASG00005001463) #20 GGCX (ENSEASG00005001468) #21 VAMP8 (ENSEASG00005023642) #22 VAMP5 (ENSEASG00005001487) #23 RNF181 (ENSEASG00005029086) #24 TMEM150A (ENSEASG00005001495) #25 ENSEASG00005033768 #26 USP39 (ENSEASG00005001505) #27 SFTPB (ENSEASG00005001518) #28 ENSEASG00005001603 ATOH8 (ENSEASG00005001607) #29 ST3GAL5 (ENSEASG00005001613) #31 POLR1A (ENSEASG00005001625) #32 PTCD3 (ENSEASG00005001638) #33 IMMT (ENSEASG00005001647) #34 MRPL35 (ENSEASG00005001655) #35 REEP1 (ENSEASG00005001661) #36 KDM3A (ENSEASG00005001676) #37 Atlantogenata ANCESTRAL SPECIES 98 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Afrotheria ANCESTRAL SPECIES 119 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Afrotheria_a ANCESTRAL SPECIES 121 ENSGT00940000156351 #10 ENSGT00940000154761 #11 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #31 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Elephant MODERN SPECIES 589 ENSLAFG00000031540 SUCLG1 (ENSLAFG00000014517) #10 DNAH6 (ENSLAFG00000009483) #11 TMSB10 (ENSLAFG00000021694) KCMF1 (ENSLAFG00000018643) #13 TCF7L1 (ENSLAFG00000016275) #14 ENSLAFG00000005443 #15 RETSAT (ENSLAFG00000016282) #16 ELMOD3 (ENSLAFG00000016291) #17 CAPG (ENSLAFG00000016295) #18 ENSLAFG00000021536 #19 MAT2A (ENSLAFG00000018042) #20 GGCX (ENSLAFG00000018045) #21 VAMP8 (ENSLAFG00000001520) #22 VAMP5 (ENSLAFG00000021786) #23 RNF181 (ENSLAFG00000021776) #24 TMEM150A (ENSLAFG00000018054) #25 C2orf68 (ENSLAFG00000023236) #26 USP39 (ENSLAFG00000011741) #27 SFTPB (ENSLAFG00000015010) #28 ATOH8 (ENSLAFG00000027790) #29 ST3GAL5 (ENSLAFG00000003639) #31 POLR1A (ENSLAFG00000014948) #32 PTCD3 (ENSLAFG00000014956) #33 IMMT (ENSLAFG00000001316) #34 MRPL35 (ENSLAFG00000001319) #35 REEP1 (ENSLAFG00000001321) #36 ENSLAFG00000026894 #37 ENSLAFG00000009979 #37 Tenrec MODERN SPECIES 13811 VAMP8 (ENSETEG00000003509) #22 Xenarthra ANCESTRAL SPECIES 240 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 Armadillo MODERN SPECIES 344 ENSDNOG00000035009 #14 ENSDNOG00000046253 #15 RETSAT (ENSDNOG00000035880) #16 ELMOD3 (ENSDNOG00000006657) #17 CAPG (ENSDNOG00000019583) #18 MAT2A (ENSDNOG00000033164) #20 GGCX (ENSDNOG00000008326) #21 VAMP8 (ENSDNOG00000044201) #22 VAMP5 (ENSDNOG00000039900) #23 RNF181 (ENSDNOG00000011353) #24 TMEM150A (ENSDNOG00000033208) #25 USP39 (ENSDNOG00000034517) #27 SFTPB (ENSDNOG00000043019) #28 ENSDNOG00000024234 ATOH8 (ENSDNOG00000047321) #29