Glires ANCESTRAL SPECIES 13 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000162805 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rodentia ANCESTRAL SPECIES 15 ENSGT00940000154447.y.a ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000162300 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Myomorpha ANCESTRAL SPECIES 37 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Muroidea ANCESTRAL SPECIES 38 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Muroidea_A ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Cricetidae ANCESTRAL SPECIES 3 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000029513 #7 Jkampl (ENSPEMG00000024694) #8 Suclg1 (ENSPEMG00000010810) #9 Dnah6 (ENSPEMG00000023939) #10 ENSPEMG00000030958 #11 ENSPEMG00000026592 #12 Kcmf1 (ENSPEMG00000029405) #13 Tcf7l1 (ENSPEMG00000004714) #14 Tgoln1 (ENSPEMG00000007145) #15 Retsat (ENSPEMG00000011191) #16 Elmod3 (ENSPEMG00000010510) #17 Capg (ENSPEMG00000018215) #18 Sh2d6 (ENSPEMG00000016371) #19 Mat2a (ENSPEMG00000015257) #20 Ggcx (ENSPEMG00000013327) #21 Vamp8 (ENSPEMG00000029313) #22 Vamp5 (ENSPEMG00000027040) #23 ENSPEMG00000010283 #24 Tmem150a (ENSPEMG00000018551) #25 0610030E20Rik (ENSPEMG00000025650) #26 Usp39 (ENSPEMG00000030030) #27 Sftpb (ENSPEMG00000013792) #28 Atoh8 (ENSPEMG00000014683) #29 St3gal5 (ENSPEMG00000022543) #30 ENSPEMG00000023889 #31 Polr1a (ENSPEMG00000022224) #32 Ptcd3 (ENSPEMG00000024106) #33 Immt (ENSPEMG00000009199) #34 Mrpl35 (ENSPEMG00000021175) #35 Reep1 (ENSPEMG00000021271) #36 Kdm3a (ENSPEMG00000020813) #37 Prairie vole MODERN SPECIES 83 ENSMOCG00000004435 Suclg1 (ENSMOCG00000021421) #9 Dnah6 (ENSMOCG00000002417) #10 ENSMOCG00000012602 #11 Kcmf1 (ENSMOCG00000003279) #13 Tcf7l1 (ENSMOCG00000012953) #14 ENSMOCG00000000091 #15 Retsat (ENSMOCG00000021447) #16 ENSMOCG00000000675 ENSMOCG00000002524 Elmod3 (ENSMOCG00000015870) #17 Capg (ENSMOCG00000005806) #18 Sh2d6 (ENSMOCG00000015508) #19 ENSMOCG00000011611 #20 Ggcx (ENSMOCG00000017281) #21 Vamp8 (ENSMOCG00000004037) #22 Vamp5 (ENSMOCG00000014948) #23 ENSMOCG00000020563 #24 Tmem150a (ENSMOCG00000012440) #25 0610030E20Rik (ENSMOCG00000022948) #26 Usp39 (ENSMOCG00000014162) #27 Sftpb (ENSMOCG00000003084) #28 Atoh8 (ENSMOCG00000019812) #29 St3gal5 (ENSMOCG00000005961) #30 Polr1a (ENSMOCG00000000122) #32 Ptcd3 (ENSMOCG00000019181) #33 Immt (ENSMOCG00000000827) #34 Mrpl35 (ENSMOCG00000008652) #35 Reep1 (ENSMOCG00000013750) #36 Kdm3a (ENSMOCG00000011851) #37 Chmp3 (ENSMOCG00000022847) Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Chinese hamster chok1gshd MODERN SPECIES 242 Ctnna2 (ENSCGRG00001000241) Jkampl (ENSCGRG00001016234) #8 Suclg1 (ENSCGRG00001007965) #9 Dnah6 (ENSCGRG00001001087) #10 ENSCGRG00001017576 Tmsb10b (ENSCGRG00001017927) #11 Kcmf1 (ENSCGRG00001018737) #13 Tcf7l1 (ENSCGRG00001021396) #14 ENSCGRG00001022789 #15 Retsat (ENSCGRG00001023894) #16 Elmod3 (ENSCGRG00001000477) #17 Capg (ENSCGRG00001001836) #18 Sh2d6 (ENSCGRG00001007691) #19 Mat2a (ENSCGRG00001010053) #20 Ggcx (ENSCGRG00001012860) #21 Vamp8 (ENSCGRG00001014727) #22 Vamp5 (ENSCGRG00001015261) #23 Tmem150a (ENSCGRG00001016577) #25 Rnf181 (ENSCGRG00001017863) 0610030E20Rik (ENSCGRG00001019313) #26 Usp39 (ENSCGRG00001019807) #27 Sftpb (ENSCGRG00001020533) #28 Atoh8 (ENSCGRG00001000824) #29 St3gal5 (ENSCGRG00001002527) #30 ENSCGRG00001015637 Polr1a (ENSCGRG00001006651) #32 Ptcd3 (ENSCGRG00001010361) #33 Immt (ENSCGRG00001013917) #34 Mrpl35 (ENSCGRG00001016701) #35 Reep1 (ENSCGRG00001018917) #36 Kdm3a (ENSCGRG00001020421) #37 Golden Hamster MODERN SPECIES 675 Sh2d6 (ENSMAUG00000000137) #19 Mat2a (ENSMAUG00000010463) #20 Ggcx (ENSMAUG00000014325) #21 Vamp8 (ENSMAUG00000018469) #22 Vamp5 (ENSMAUG00000010363) #23 ENSMAUG00000015068 #24 Tmem150a (ENSMAUG00000012394) #25 0610030E20Rik (ENSMAUG00000011957) #26 Usp39 (ENSMAUG00000009400) #27 Sftpb (ENSMAUG00000008956) #28 Atoh8 (ENSMAUG00000008236) #29 St3gal5 (ENSMAUG00000012326) #30 Polr1a (ENSMAUG00000008497) #32 Ptcd3 (ENSMAUG00000000145) #33 Immt (ENSMAUG00000011453) #34 Mrpl35 (ENSMAUG00000009361) #35 Reep1 (ENSMAUG00000013117) #36 Kdm3a (ENSMAUG00000006230) #37 Chmp3 (ENSMAUG00000009081) Murinae ANCESTRAL SPECIES 4 ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000165681 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mus ANCESTRAL SPECIES 12 ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000165681 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mus_A ANCESTRAL SPECIES 7 ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000165681 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mus_B ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Mouse MODERN SPECIES 15 Ctnna2 (ENSMUSG00000063063) Gm9008 (ENSMUSG00000072476) Jkampl (ENSMUSG00000056197) #8 Suclg1 (ENSMUSG00000052738) #9 Dnah6 (ENSMUSG00000052861) #10 Tmsb10 (ENSMUSG00000079523) Kcmf1 (ENSMUSG00000055239) #13 Tcf7l1 (ENSMUSG00000055799) #14 Tgoln1 (ENSMUSG00000056429) #15 Retsat (ENSMUSG00000056666) #16 Elmod3 (ENSMUSG00000056698) #17 Capg (ENSMUSG00000056737) #18 Sh2d6 (ENSMUSG00000052631) #19 Mat2a (ENSMUSG00000053907) #20 Ggcx (ENSMUSG00000053460) #21 Vamp8 (ENSMUSG00000050732) #22 Vamp5 (ENSMUSG00000073002) #23 Rnf181 (ENSMUSG00000055850) Tmem150a (ENSMUSG00000055912) #25 0610030E20Rik (ENSMUSG00000058706) #26 Usp39 (ENSMUSG00000056305) #27 Sftpb (ENSMUSG00000056370) #28 Atoh8 (ENSMUSG00000037621) #29 St3gal5 (ENSMUSG00000056091) #30 Polr1a (ENSMUSG00000049553) #32 Ptcd3 (ENSMUSG00000063884) #33 Immt (ENSMUSG00000052337) #34 Mrpl35 (ENSMUSG00000052962) #35 Reep1 (ENSMUSG00000052852) #36 Kdm3a (ENSMUSG00000053470) #37 Chmp3 (ENSMUSG00000053119) Mus_C ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j #8 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C spretus MODERN SPECIES 15 Lrrtm1 (MGP_SPRETEiJ_G0029523) Ctnna2 (MGP_SPRETEiJ_G0029522) Jkampl (MGP_SPRETEiJ_G0029521) #8 Suclg1 (MGP_SPRETEiJ_G0029520) #9 Dnah6 (MGP_SPRETEiJ_G0029519) #10 MGP_SPRETEiJ_G0029518 Kcmf1 (MGP_SPRETEiJ_G0029517) #13 Tcf7l1 (MGP_SPRETEiJ_G0029516) #14 Tgoln1 (MGP_SPRETEiJ_G0029515) #15 Retsat (MGP_SPRETEiJ_G0029514) #16 Elmod3 (MGP_SPRETEiJ_G0029513) #17 Capg (MGP_SPRETEiJ_G0029512) #18 MGP_SPRETEiJ_G0029511 #19 Mat2a (MGP_SPRETEiJ_G0029510) #20 Ggcx (MGP_SPRETEiJ_G0029509) #21 Vamp8 (MGP_SPRETEiJ_G0029508) #22 Vamp5 (MGP_SPRETEiJ_G0029507) #23 Rnf181 (MGP_SPRETEiJ_G0029506) Tmem150a (MGP_SPRETEiJ_G0029505) #25 0610030E20Rik (MGP_SPRETEiJ_G0029504) #26 Usp39 (MGP_SPRETEiJ_G0029503) #27 Sftpb (MGP_SPRETEiJ_G0029502) #28 Atoh8 (MGP_SPRETEiJ_G0029501) #29 St3gal5 (MGP_SPRETEiJ_G0029500) #30 Polr1a (MGP_SPRETEiJ_G0029499) #32 Ptcd3 (MGP_SPRETEiJ_G0029498) #33 Immt (MGP_SPRETEiJ_G0029497) #34 Mrpl35 (MGP_SPRETEiJ_G0029496) #35 MGP_SPRETEiJ_G0029495 #36 Kdm3a (MGP_SPRETEiJ_G0029494) #37 Chmp3 (MGP_SPRETEiJ_G0029493) Steppe mouse MODERN SPECIES 3287 ENSMSIG00000006995 Suclg1 (ENSMSIG00000007008) #9 ENSMSIG00000007054 ENSMSIG00000007062 Dnah6 (ENSMSIG00000007091) #10 Tmsb10b (ENSMSIG00000007285) #11 Kcmf1 (ENSMSIG00000007304) #13 Tcf7l1 (ENSMSIG00000007365) #14 ENSMSIG00000007493 #15 Retsat (ENSMSIG00000007552) #16 Elmod3 (ENSMSIG00000007675) #17 Capg (ENSMSIG00000007704) #18 Sh2d6 (ENSMSIG00000007788) #19 Mat2a (ENSMSIG00000007887) #20 Ggcx (ENSMSIG00000007972) #21 Vamp8 (ENSMSIG00000008076) #22 ENSMSIG00000008096 #23 ENSMSIG00000008118 #24 Tmem150a (ENSMSIG00000008166) #25 0610030E20Rik (ENSMSIG00000008200) #26 Usp39 (ENSMSIG00000008226) #27 Sftpb (ENSMSIG00000008238) #28 Atoh8 (ENSMSIG00000008291) #29 St3gal5 (ENSMSIG00000008306) #30 ENSMSIG00000008349 Polr1a (ENSMSIG00000008358) #32 Ptcd3 (ENSMSIG00000008420) #33 Immt (ENSMSIG00000008522) #34 Mrpl35 (ENSMSIG00000009352) #35 Reep1 (ENSMSIG00000009384) #36 Kdm3a (ENSMSIG00000009485) #37 Ryukyu mouse MODERN SPECIES 15 Lrrtm1 (MGP_CAROLIEiJ_G0028518) Ctnna2 (MGP_CAROLIEiJ_G0028517) Jkampl (MGP_CAROLIEiJ_G0028516) #8 Suclg1 (MGP_CAROLIEiJ_G0028515) #9 Dnah6 (MGP_CAROLIEiJ_G0028514) #10 Tmsb10 (MGP_CAROLIEiJ_G0028513) Kcmf1 (MGP_CAROLIEiJ_G0028512) #13 Tcf7l1 (MGP_CAROLIEiJ_G0028511) #14 Tgoln1 (MGP_CAROLIEiJ_G0028510) #15 Retsat (MGP_CAROLIEiJ_G0028509) #16 Elmod3 (MGP_CAROLIEiJ_G0028508) #17 Capg (MGP_CAROLIEiJ_G0028507) #18 Sh2d6 (MGP_CAROLIEiJ_G0028506) #19 Mat2a (MGP_CAROLIEiJ_G0028505) #20 Ggcx (MGP_CAROLIEiJ_G0028504) #21 Vamp8 (MGP_CAROLIEiJ_G0028503) #22 Vamp5 (MGP_CAROLIEiJ_G0028502) #23 MGP_CAROLIEiJ_G0028501 #24 Tmem150a (MGP_CAROLIEiJ_G0028500) #25 0610030E20Rik (MGP_CAROLIEiJ_G0028499) #26 Usp39 (MGP_CAROLIEiJ_G0028498) #27 Sftpb (MGP_CAROLIEiJ_G0028497) #28 Atoh8 (MGP_CAROLIEiJ_G0028496) #29 St3gal5 (MGP_CAROLIEiJ_G0028495) #30 Polr1a (MGP_CAROLIEiJ_G0028494) #32 Ptcd3 (MGP_CAROLIEiJ_G0028493) #33 Immt (MGP_CAROLIEiJ_G0028492) #34 Mrpl35 (MGP_CAROLIEiJ_G0028491) #35 MGP_CAROLIEiJ_G0028490 #36 Kdm3a (MGP_CAROLIEiJ_G0028489) #37 Chmp3 (MGP_CAROLIEiJ_G0028488) Shrew mouse MODERN SPECIES 11 Lrrtm1 (MGP_PahariEiJ_G0022253) Ctnna2 (MGP_PahariEiJ_G0022252) Jkampl (MGP_PahariEiJ_G0022251) #8 Suclg1 (MGP_PahariEiJ_G0022250) #9 Dnah6 (MGP_PahariEiJ_G0022249) #10 Tmsb10 (MGP_PahariEiJ_G0022248) Kcmf1 (MGP_PahariEiJ_G0022247) #13 Tcf7l1 (MGP_PahariEiJ_G0022246) #14 MGP_PahariEiJ_G0022245 #15 Retsat (MGP_PahariEiJ_G0022244) #16 Elmod3 (MGP_PahariEiJ_G0022243) #17 Capg (MGP_PahariEiJ_G0022242) #18 Sh2d6 (MGP_PahariEiJ_G0022241) #19 Mat2a (MGP_PahariEiJ_G0022240) #20 Ggcx (MGP_PahariEiJ_G0022239) #21 Vamp8 (MGP_PahariEiJ_G0022238) #22 Rnf181 (MGP_PahariEiJ_G0022237) Tmem150a (MGP_PahariEiJ_G0022236) #25 0610030E20Rik (MGP_PahariEiJ_G0022235) #26 Usp39 (MGP_PahariEiJ_G0022234) #27 Sftpb (MGP_PahariEiJ_G0022233) #28 Atoh8 (MGP_PahariEiJ_G0022232) #29 St3gal5 (MGP_PahariEiJ_G0022231) #30 Polr1a (MGP_PahariEiJ_G0022230) #32 Ptcd3 (MGP_PahariEiJ_G0022229) #33 Immt (MGP_PahariEiJ_G0022228) #34 Mrpl35 (MGP_PahariEiJ_G0022227) #35 MGP_PahariEiJ_G0022226 #36 Kdm3a (MGP_PahariEiJ_G0022225) #37 Chmp3 (MGP_PahariEiJ_G0022224) Rnf103 (MGP_PahariEiJ_G0022223) Rat MODERN SPECIES 14 ENSRNOG00000071146 Ptbp1-ps3 (ENSRNOG00000070516) Jkampl (ENSRNOG00000024604) #8 Suclg1 (ENSRNOG00000005587) #9 Dnah6 (ENSRNOG00000015581) #10 Tmsb10 (ENSRNOG00000064090) Kcmf1 (ENSRNOG00000015097) #13 Tcf7l1 (ENSRNOG00000014753) #14 Tgoln2 (ENSRNOG00000014617) #15 Retsat (ENSRNOG00000014090) #16 Elmod3 (ENSRNOG00000038102) #17 Capg (ENSRNOG00000013668) #18 Sh2d6 (ENSRNOG00000013605) #19 Mat2a (ENSRNOG00000013520) #20 Ggcx (ENSRNOG00000012975) #21 Vamp8 (ENSRNOG00000012748) #22 Vamp5 (ENSRNOG00000012659) #23 Rnf181 (ENSRNOG00000012035) #24 Tmem150a (ENSRNOG00000061100) #25 LOC691113 (ENSRNOG00000011713) #26 Usp39 (ENSRNOG00000010930) #27 Sftpb (ENSRNOG00000010761) #28 Atoh8 (ENSRNOG00000010716) #29 ENSRNOG00000065207 St3gal5 (ENSRNOG00000010284) #30 Polr1a (ENSRNOG00000009545) #32 Ptcd3 (ENSRNOG00000009484) #33 Immt (ENSRNOG00000009097) #34 Mrpl35 (ENSRNOG00000008546) #35 Reep1 (ENSRNOG00000008481) #36 Kdm3a (ENSRNOG00000007814) #37 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1096 ENSNGAG00000009815 Jkampl (ENSNGAG00000013694) #8 ENSNGAG00000023092 Suclg1 (ENSNGAG00000015283) #9 ENSNGAG00000013792 Dnah6 (ENSNGAG00000013760) #10 Tmsb10b (ENSNGAG00000016585) #11 ENSNGAG00000017279 #13 Tcf7l1 (ENSNGAG00000020122) #14 Retsat (ENSNGAG00000007772) #16 Elmod3 (ENSNGAG00000017699) #17 Capg (ENSNGAG00000019315) #18 Sh2d6 (ENSNGAG00000000856) #19 Mat2a (ENSNGAG00000014289) #20 Ggcx (ENSNGAG00000000695) #21 ENSNGAG00000014911 #22 Vamp5 (ENSNGAG00000022303) #23 ENSNGAG00000010364 #24 Tmem150a (ENSNGAG00000000493) #25 0610030E20Rik (ENSNGAG00000012174) #26 Usp39 (ENSNGAG00000018760) #27 Sftpb (ENSNGAG00000020909) #28 Atoh8 (ENSNGAG00000017424) #29 ENSNGAG00000017959 St3gal5 (ENSNGAG00000020246) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 1224 Stab2 (ENSNGAG00000001493) Nt5dc3 (ENSNGAG00000018361) Hsp90b1 (ENSNGAG00000014447) ENSNGAG00000013621 Tdg (ENSNGAG00000000667) Glt8d2 (ENSNGAG00000002040) Hcfc2 (ENSNGAG00000019076) Nfyb (ENSNGAG00000017224) Eid3 (ENSNGAG00000019100) ENSNGAG00000019222 Chst11 (ENSNGAG00000017327) ENSNGAG00000015399 #22 Slc41a2 (ENSNGAG00000013889) Nopchap1 (ENSNGAG00000012316) Aldh1l2 (ENSNGAG00000020174) ENSNGAG00000019266 Washc4 (ENSNGAG00000015936) ENSNGAG00000014686 1500009L16Rik (ENSNGAG00000013967) Nuak1 (ENSNGAG00000011987) Ckap4 (ENSNGAG00000015103) Tcp11l2 (ENSNGAG00000012830) Polr3b (ENSNGAG00000011308) Rfx4 (ENSNGAG00000000351) Ric8b (ENSNGAG00000018867) Tmem263 (ENSNGAG00000015885) Mterf2 (ENSNGAG00000000529) Lesser Egyptian jerboa MODERN SPECIES 77 Suclg1 (ENSJJAG00000023782) #9 ENSJJAG00000020479 Dnah6 (ENSJJAG00000013999) #10 ENSJJAG00000009987 #11 ENSJJAG00000006387 Kcmf1 (ENSJJAG00000020771) #13 ENSJJAG00000010136 Tcf7l1 (ENSJJAG00000023485) #14 ENSJJAG00000022764 Retsat (ENSJJAG00000018206) #16 Elmod3 (ENSJJAG00000015903) #17 Capg (ENSJJAG00000011988) #18 Sh2d6 (ENSJJAG00000011036) #19 Mat2a (ENSJJAG00000019942) #20 Ggcx (ENSJJAG00000013219) #21 Vamp8 (ENSJJAG00000023575) #22 Vamp5 (ENSJJAG00000021713) #23 ENSJJAG00000012435 #24 Tmem150a (ENSJJAG00000015485) #25 Sftpb (ENSJJAG00000020339) #28 Atoh8 (ENSJJAG00000003684) #29 St3gal5 (ENSJJAG00000012802) #30 Polr1a (ENSJJAG00000013113) #32 ENSJJAG00000012431 #33 Immt (ENSJJAG00000015348) #34 Reep1 (ENSJJAG00000021695) #36 Kdm3a (ENSJJAG00000022464) #37 ENSJJAG00000016934 ENSJJAG00000004517 Rnf103 (ENSJJAG00000013104) ENSJJAG00000002281 Kangaroo rat MODERN SPECIES 528 Suclg1 (ENSDORG00000010991) #9 Dnah6 (ENSDORG00000000400) #10 Tmsb10b (ENSDORG00000025129) #11 Kcmf1 (ENSDORG00000029229) #13 Tcf7l1 (ENSDORG00000013753) #14 Retsat (ENSDORG00000009720) #16 Elmod3 (ENSDORG00000009721) #17 Capg (ENSDORG00000009722) #18 Sh2d6 (ENSDORG00000013882) #19 Mat2a (ENSDORG00000011312) #20 Ggcx (ENSDORG00000006726) #21 Vamp8 (ENSDORG00000010738) #22 Vamp5 (ENSDORG00000027327) #23 ENSDORG00000010740 #24 Tmem150a (ENSDORG00000010742) #25 0610030E20Rik (ENSDORG00000030143) #26 Usp39 (ENSDORG00000010746) #27 Sftpb (ENSDORG00000010751) #28 Atoh8 (ENSDORG00000028892) #29 St3gal5 (ENSDORG00000008296) #30 Polr1a (ENSDORG00000008298) #32 Ptcd3 (ENSDORG00000008305) #33 ENSDORG00000001073 #34 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000154447.z ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Sciuridae ANCESTRAL SPECIES 53 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Marmotini ANCESTRAL SPECIES 86 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Alpin marmot MODERN SPECIES 118 ENSMMMG00000007007 ENSMMMG00000007012 ENSMMMG00000007026 RPIA (ENSMMMG00000007477) ENSMMMG00000007572 ENSMMMG00000007617 ENSMMMG00000007627 TCF7L1 (ENSMMMG00000007633) #14 ENSMMMG00000007682 #15 RETSAT (ENSMMMG00000007689) #16 ENSMMMG00000007785 #17 CAPG (ENSMMMG00000007822) #18 ENSMMMG00000007857 #19 MAT2A (ENSMMMG00000007871) #20 GGCX (ENSMMMG00000008142) #21 VAMP8 (ENSMMMG00000008162) #22 VAMP5 (ENSMMMG00000008168) #23 RNF181 (ENSMMMG00000008179) #24 TMEM150A (ENSMMMG00000008189) #25 USP39 (ENSMMMG00000008203) #27 ENSMMMG00000008853 #26 SFTPB (ENSMMMG00000008881) #28 ST3GAL5 (ENSMMMG00000008911) #30 POLR1A (ENSMMMG00000008920) #32 PTCD3 (ENSMMMG00000008977) #33 IMMT (ENSMMMG00000009011) #34 MRPL35 (ENSMMMG00000009181) #35 REEP1 (ENSMMMG00000009193) #36 KDM3A (ENSMMMG00000009242) #37 CHMP3 (ENSMMMG00000009359) RNF103 (ENSMMMG00000009373) Marmotini_b ANCESTRAL SPECIES 128 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000154129.m.r.b ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 Squirrel MODERN SPECIES 312 RPIA (ENSSTOG00000023312) ENSSTOG00000034297 ENSSTOG00000031036 TCF7L1 (ENSSTOG00000021988) #14 ENSSTOG00000020177 #15 RETSAT (ENSSTOG00000026131) #16 ELMOD3 (ENSSTOG00000009420) #17 CAPG (ENSSTOG00000009431) #18 ENSSTOG00000010788 #19 MAT2A (ENSSTOG00000010796) #20 GGCX (ENSSTOG00000010797) #21 VAMP8 (ENSSTOG00000005962) #22 VAMP5 (ENSSTOG00000005966) #23 RNF181 (ENSSTOG00000005973) #24 TMEM150A (ENSSTOG00000023355) #25 C2orf68 (ENSSTOG00000032886) #26 USP39 (ENSSTOG00000015986) #27 SFTPB (ENSSTOG00000026197) #28 ENSSTOG00000033478 ATOH8 (ENSSTOG00000006538) #29 ST3GAL5 (ENSSTOG00000024816) #30 ENSSTOG00000012609 POLR1A (ENSSTOG00000012580) #32 PTCD3 (ENSSTOG00000012611) #33 IMMT (ENSSTOG00000012624) #34 MRPL35 (ENSSTOG00000030233) #35 REEP1 (ENSSTOG00000025141) #36 Arctic ground squirrel MODERN SPECIES 609 IGKC (ENSUPAG00010018047) RPIA (ENSUPAG00010018051) ENSUPAG00010018060 TCF7L1 (ENSUPAG00010018088) #14 ENSUPAG00010018102 #15 RETSAT (ENSUPAG00010018105) #16 ELMOD3 (ENSUPAG00010018158) #17 CAPG (ENSUPAG00010018187) #18 SH2D6 (ENSUPAG00010018214) #19 MAT2A (ENSUPAG00010000075) #20 GGCX (ENSUPAG00010000144) #21 VAMP8 (ENSUPAG00010000178) #22 ENSUPAG00010000192 #23 TMEM150A (ENSUPAG00010000226) #25 RNF181 (ENSUPAG00010000242) #24 ENSUPAG00010000260 #26 USP39 (ENSUPAG00010000286) #27 SFTPB (ENSUPAG00010000319) #28 ENSUPAG00010000360 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005019338 ENSSVLG00005019271 ENSSVLG00005018002 ENSSVLG00005017863 ENSSVLG00005017786 TCF7L1 (ENSSVLG00005017741) #14 ENSSVLG00005017693 #15 RETSAT (ENSSVLG00005017559) #16 ELMOD3 (ENSSVLG00005017414) #17 CAPG (ENSSVLG00005017210) #18 ENSSVLG00005017177 SH2D6 (ENSSVLG00005016979) #19 MAT2A (ENSSVLG00005016926) #20 ENSSVLG00005016868 GGCX (ENSSVLG00005016698) #21 VAMP8 (ENSSVLG00005016627) #22 VAMP5 (ENSSVLG00005016585) #23 RNF181 (ENSSVLG00005016555) #24 TMEM150A (ENSSVLG00005016477) #25 ENSSVLG00005016431 #26 USP39 (ENSSVLG00005016257) #27 SFTPB (ENSSVLG00005015980) #28 ATOH8 (ENSSVLG00005015922) #29 ST3GAL5 (ENSSVLG00005015795) #30 POLR1A (ENSSVLG00005015696) #32 PTCD3 (ENSSVLG00005016912) #33 IMMT (ENSSVLG00005016785) #34 MRPL35 (ENSSVLG00005016713) #35 REEP1 (ENSSVLG00005016418) #36 KDM3A (ENSSVLG00005016348) #37 CHMP3 (ENSSVLG00005016280) Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000154447.z.e.a ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000163007 #11 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Long-tailed chinchilla MODERN SPECIES 131 ENSCLAG00000005858 LRRTM1 (ENSCLAG00000005364) CTNNA2 (ENSCLAG00000013755) ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) #9 DNAH6 (ENSCLAG00000006035) #10 TMSB10 (ENSCLAG00000010365) #11 KCMF1 (ENSCLAG00000009986) #13 TCF7L1 (ENSCLAG00000007414) #14 RETSAT (ENSCLAG00000008939) #16 ELMOD3 (ENSCLAG00000009003) #17 CAPG (ENSCLAG00000004481) #18 ENSCLAG00000006141 #19 MAT2A (ENSCLAG00000007205) #20 GGCX (ENSCLAG00000005838) #21 VAMP8 (ENSCLAG00000008880) #22 VAMP5 (ENSCLAG00000009915) #23 RNF181 (ENSCLAG00000006082) #24 TMEM150A (ENSCLAG00000005500) #25 C2orf68 (ENSCLAG00000009438) #26 USP39 (ENSCLAG00000006866) #27 SFTPB (ENSCLAG00000006471) #28 ATOH8 (ENSCLAG00000006142) #29 ST3GAL5 (ENSCLAG00000006950) #30 POLR1A (ENSCLAG00000005187) #32 PTCD3 (ENSCLAG00000007992) #33 IMMT (ENSCLAG00000005278) #34 MRPL35 (ENSCLAG00000004489) #35 REEP1 (ENSCLAG00000012499) #36 KDM3A (ENSCLAG00000011990) #37 CHMP3 (ENSCLAG00000009289) Degu MODERN SPECIES 203 ENSODEG00000002222 ENSODEG00000002212 SUCLG1 (ENSODEG00000002195) #9 DNAH6 (ENSODEG00000003756) #10 ENSODEG00000003596 #11 ENSODEG00000003586 #13 TCF7L1 (ENSODEG00000003559) #14 RETSAT (ENSODEG00000003469) #16 ELMOD3 (ENSODEG00000003393) #17 CAPG (ENSODEG00000003321) #18 ENSODEG00000018929 SH2D6 (ENSODEG00000003239) #19 ENSODEG00000003186 #20 GGCX (ENSODEG00000003141) #21 VAMP8 (ENSODEG00000003107) #22 VAMP5 (ENSODEG00000003093) #23 RNF181 (ENSODEG00000003046) #24 TMEM150A (ENSODEG00000003753) #25 C2orf68 (ENSODEG00000003734) #26 USP39 (ENSODEG00000003717) #27 SFTPB (ENSODEG00000003695) #28 ATOH8 (ENSODEG00000003670) #29 ST3GAL5 (ENSODEG00000003647) #30 ENSODEG00000018941 POLR1A (ENSODEG00000003542) #32 PTCD3 (ENSODEG00000003461) #33 IMMT (ENSODEG00000003274) #34 MRPL35 (ENSODEG00000003180) #35 REEP1 (ENSODEG00000003133) #36 KDM3A (ENSODEG00000003061) #37 Guinea pig MODERN SPECIES 37 ENSCPOG00000004885 ENSCPOG00000032214 LRRTM1 (ENSCPOG00000001371) CTNNA2 (ENSCPOG00000023564) SUCLG1 (ENSCPOG00000003017) #9 DNAH6 (ENSCPOG00000015041) #10 KCMF1 (ENSCPOG00000023050) #13 TCF7L1 (ENSCPOG00000014492) #14 ENSCPOG00000037555 #15 RETSAT (ENSCPOG00000022640) #16 ELMOD3 (ENSCPOG00000007973) #17 CAPG (ENSCPOG00000007978) #18 ENSCPOG00000012229 #19 MAT2A (ENSCPOG00000001533) #20 GGCX (ENSCPOG00000001534) #21 VAMP8 (ENSCPOG00000001409) #22 VAMP5 (ENSCPOG00000021802) #23 RNF181 (ENSCPOG00000001938) #24 TMEM150A (ENSCPOG00000025516) #25 C2orf68 (ENSCPOG00000009311) #26 USP39 (ENSCPOG00000009315) #27 SFTPB (ENSCPOG00000035291) #28 ATOH8 (ENSCPOG00000006364) #29 ST3GAL5 (ENSCPOG00000000993) #30 POLR1A (ENSCPOG00000012350) #32 PTCD3 (ENSCPOG00000012371) #33 IMMT (ENSCPOG00000012379) #34 MRPL35 (ENSCPOG00000012387) #35 REEP1 (ENSCPOG00000012389) #36 KDM3A (ENSCPOG00000023055) #37 CHMP3 (ENSCPOG00000001723) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000020983 SUCLG1 (ENSHGLG00000047475) #9 ENSHGLG00000016621 #10 ENSHGLG00000039609 #11 ENSHGLG00000036565 #13 ENSHGLG00000049290 TCF7L1 (ENSHGLG00000044140) #14 ENSHGLG00000007230 #15 RETSAT (ENSHGLG00000009788) #16 ENSHGLG00000005816 #17 ENSHGLG00000043435 CAPG (ENSHGLG00000004995) #18 SH2D6 (ENSHGLG00000016223) #19 MAT2A (ENSHGLG00000018376) #20 GGCX (ENSHGLG00000013929) #21 VAMP8 (ENSHGLG00000012997) #22 ENSHGLG00000012613 #23 RNF181 (ENSHGLG00000045564) #24 TMEM150A (ENSHGLG00000010994) #25 C2orf68 (ENSHGLG00000036696) #26 USP39 (ENSHGLG00000015846) #27 SFTPB (ENSHGLG00000016430) #28 ENSHGLG00000033431 ATOH8 (ENSHGLG00000013394) #29 ST3GAL5 (ENSHGLG00000015817) #30 ENSHGLG00000050264 ENSHGLG00000006334 #32 PTCD3 (ENSHGLG00000007937) #33 IMMT (ENSHGLG00000004647) #34 ENSHGLG00000049882 MRPL35 (ENSHGLG00000042289) #35 Lagomorpha ANCESTRAL SPECIES 47 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 #9 ENSGT00940000154761 #10 ENSGT00940000162805 ENSGT00940000163007 #11 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #32 ENSGT00390000016876 #33 ENSGT00390000002313 #34 ENSGT00390000007547 #35 ENSGT00940000159532 #36 ENSGT00940000160135 #37 ENSGT00950000182832.C Rabbit MODERN SPECIES 11 ENSOCUG00000032531 ENSOCUG00000031742 DNAH6 (ENSOCUG00000010057) #10 TMSB10 (ENSOCUG00000017506) #11 TRABD2A (ENSOCUG00000010075) ENSOCUG00000035044 #13 ENSOCUG00000002533 #13 TCF7L1 (ENSOCUG00000008749) #14 ENSOCUG00000008764 #15 RETSAT (ENSOCUG00000026865) #16 ELMOD3 (ENSOCUG00000002332) #17 CAPG (ENSOCUG00000002341) #18 ENSOCUG00000039138 MAT2A (ENSOCUG00000002361) #20 GGCX (ENSOCUG00000002368) #21 VAMP8 (ENSOCUG00000002375) #22 VAMP5 (ENSOCUG00000025906) #23 ENSOCUG00000007951 #24 TMEM150A (ENSOCUG00000007956) #25 ENSOCUG00000010066 #26 USP39 (ENSOCUG00000010070) #27 ENSOCUG00000020733 #28 ATOH8 (ENSOCUG00000003528) #29 ST3GAL5 (ENSOCUG00000010126) #30 POLR1A (ENSOCUG00000010138) #32 ENSOCUG00000010161 #33 IMMT (ENSOCUG00000010178) #34 ENSOCUG00000010188 MRPL35 (ENSOCUG00000010193) #35 REEP1 (ENSOCUG00000010196) #36 ENSOCUG00000034180 Pika MODERN SPECIES 3193 MAT2A (ENSOPRG00000001898) #20 GGCX (ENSOPRG00000001919) #21 VAMP8 (ENSOPRG00000001958) #22 ENSOPRG00000001972 RNF181 (ENSOPRG00000001980) #24 TMEM150A (ENSOPRG00000001987) #25 C2orf68 (ENSOPRG00000002005) #26 USP39 (ENSOPRG00000002019) #27 SFTPB (ENSOPRG00000002060) #28 ST3GAL5 (ENSOPRG00000002085) #30