Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Glires ANCESTRAL SPECIES 13 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000154447.y.a ##7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000154447.z #7 ENSGT00940000161705 #9 ENSGT01030000234543.A.a #10 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000154447.z.f #7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000154447.z.f #7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Guinea pig MODERN SPECIES 37 ENSCPOG00000004885 #7 ENSCPOG00000032214 #8 LRRTM1 (ENSCPOG00000001371) #9 CTNNA2 (ENSCPOG00000023564) #10 SUCLG1 (ENSCPOG00000003017) #11 DNAH6 (ENSCPOG00000015041) #12 KCMF1 (ENSCPOG00000023050) #13 TCF7L1 (ENSCPOG00000014492) #14 ENSCPOG00000037555 #15 RETSAT (ENSCPOG00000022640) #16 ELMOD3 (ENSCPOG00000007973) #17 CAPG (ENSCPOG00000007978) #18 ENSCPOG00000012229 #19 MAT2A (ENSCPOG00000001533) #20 GGCX (ENSCPOG00000001534) #21 VAMP8 (ENSCPOG00000001409) #22 VAMP5 (ENSCPOG00000021802) #23 RNF181 (ENSCPOG00000001938) #24 TMEM150A (ENSCPOG00000025516) #25 C2orf68 (ENSCPOG00000009311) #26 USP39 (ENSCPOG00000009315) #27 SFTPB (ENSCPOG00000035291) #28 ATOH8 (ENSCPOG00000006364) #29 ST3GAL5 (ENSCPOG00000000993) #30 POLR1A (ENSCPOG00000012350) #31 PTCD3 (ENSCPOG00000012371) #32 IMMT (ENSCPOG00000012379) #33 MRPL35 (ENSCPOG00000012387) #34 REEP1 (ENSCPOG00000012389) #35 KDM3A (ENSCPOG00000023055) #36 CHMP3 (ENSCPOG00000001723) #37 Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000154447.z.e.a ##7 ENSGT00940000154447.z.f #7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171.n #13 ENSGT00940000157038 #14 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Long-tailed chinchilla MODERN SPECIES 131 ENSCLAG00000005858 #7 LRRTM1 (ENSCLAG00000005364) #9 CTNNA2 (ENSCLAG00000013755) #10 ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) #11 DNAH6 (ENSCLAG00000006035) #12 TMSB10 (ENSCLAG00000010365) KCMF1 (ENSCLAG00000009986) #13 TCF7L1 (ENSCLAG00000007414) #14 RETSAT (ENSCLAG00000008939) #16 ELMOD3 (ENSCLAG00000009003) #17 CAPG (ENSCLAG00000004481) #18 ENSCLAG00000006141 #19 MAT2A (ENSCLAG00000007205) #20 GGCX (ENSCLAG00000005838) #21 VAMP8 (ENSCLAG00000008880) #22 VAMP5 (ENSCLAG00000009915) #23 RNF181 (ENSCLAG00000006082) #24 TMEM150A (ENSCLAG00000005500) #25 C2orf68 (ENSCLAG00000009438) #26 USP39 (ENSCLAG00000006866) #27 SFTPB (ENSCLAG00000006471) #28 ATOH8 (ENSCLAG00000006142) #29 ST3GAL5 (ENSCLAG00000006950) #30 POLR1A (ENSCLAG00000005187) #31 PTCD3 (ENSCLAG00000007992) #32 IMMT (ENSCLAG00000005278) #33 MRPL35 (ENSCLAG00000004489) #34 REEP1 (ENSCLAG00000012499) #35 KDM3A (ENSCLAG00000011990) #36 CHMP3 (ENSCLAG00000009289) #37 Degu MODERN SPECIES 203 ENSODEG00000002222 ENSODEG00000002212 SUCLG1 (ENSODEG00000002195) #11 DNAH6 (ENSODEG00000003756) #12 ENSODEG00000003596 ENSODEG00000003586 ##13 TCF7L1 (ENSODEG00000003559) #14 RETSAT (ENSODEG00000003469) #16 ELMOD3 (ENSODEG00000003393) #17 CAPG (ENSODEG00000003321) #18 ENSODEG00000018929 SH2D6 (ENSODEG00000003239) #19 ENSODEG00000003186 #20 GGCX (ENSODEG00000003141) #21 VAMP8 (ENSODEG00000003107) #22 VAMP5 (ENSODEG00000003093) #23 RNF181 (ENSODEG00000003046) #24 TMEM150A (ENSODEG00000003753) #25 C2orf68 (ENSODEG00000003734) #26 USP39 (ENSODEG00000003717) #27 SFTPB (ENSODEG00000003695) #28 ATOH8 (ENSODEG00000003670) #29 ST3GAL5 (ENSODEG00000003647) #30 ENSODEG00000018941 POLR1A (ENSODEG00000003542) #31 PTCD3 (ENSODEG00000003461) #32 IMMT (ENSODEG00000003274) #33 MRPL35 (ENSODEG00000003180) #34 REEP1 (ENSODEG00000003133) #35 KDM3A (ENSODEG00000003061) #36 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000020983 SUCLG1 (ENSHGLG00000047475) #11 ENSHGLG00000016621 #12 ENSHGLG00000039609 ENSHGLG00000036565 ##13 ENSHGLG00000049290 TCF7L1 (ENSHGLG00000044140) #14 ENSHGLG00000007230 #15 RETSAT (ENSHGLG00000009788) #16 ENSHGLG00000005816 #17 ENSHGLG00000043435 CAPG (ENSHGLG00000004995) #18 SH2D6 (ENSHGLG00000016223) #19 MAT2A (ENSHGLG00000018376) #20 GGCX (ENSHGLG00000013929) #21 VAMP8 (ENSHGLG00000012997) #22 ENSHGLG00000012613 #23 RNF181 (ENSHGLG00000045564) #24 TMEM150A (ENSHGLG00000010994) #25 C2orf68 (ENSHGLG00000036696) #26 USP39 (ENSHGLG00000015846) #27 SFTPB (ENSHGLG00000016430) #28 ENSHGLG00000033431 ATOH8 (ENSHGLG00000013394) #29 ST3GAL5 (ENSHGLG00000015817) #30 ENSHGLG00000050264 ENSHGLG00000006334 #31 PTCD3 (ENSHGLG00000007937) #32 IMMT (ENSHGLG00000004647) #33 ENSHGLG00000049882 MRPL35 (ENSHGLG00000042289) #34 Sciuridae ANCESTRAL SPECIES 53 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Marmotini ANCESTRAL SPECIES 86 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Alpin marmot MODERN SPECIES 118 ENSMMMG00000007007 ENSMMMG00000007012 ENSMMMG00000007026 RPIA (ENSMMMG00000007477) ENSMMMG00000007572 ENSMMMG00000007617 ENSMMMG00000007627 TCF7L1 (ENSMMMG00000007633) #14 ENSMMMG00000007682 #15 RETSAT (ENSMMMG00000007689) #16 ENSMMMG00000007785 #17 CAPG (ENSMMMG00000007822) #18 ENSMMMG00000007857 #19 MAT2A (ENSMMMG00000007871) #20 GGCX (ENSMMMG00000008142) #21 VAMP8 (ENSMMMG00000008162) #22 VAMP5 (ENSMMMG00000008168) #23 RNF181 (ENSMMMG00000008179) #24 TMEM150A (ENSMMMG00000008189) #25 USP39 (ENSMMMG00000008203) #27 ENSMMMG00000008853 #26 SFTPB (ENSMMMG00000008881) #28 ST3GAL5 (ENSMMMG00000008911) #30 POLR1A (ENSMMMG00000008920) #31 PTCD3 (ENSMMMG00000008977) #32 IMMT (ENSMMMG00000009011) #33 MRPL35 (ENSMMMG00000009181) #34 REEP1 (ENSMMMG00000009193) #35 KDM3A (ENSMMMG00000009242) #36 CHMP3 (ENSMMMG00000009359) #37 RNF103 (ENSMMMG00000009373) Marmotini_b ANCESTRAL SPECIES 128 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000154129.m.r.b ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Squirrel MODERN SPECIES 312 RPIA (ENSSTOG00000023312) ENSSTOG00000034297 ENSSTOG00000031036 TCF7L1 (ENSSTOG00000021988) #14 ENSSTOG00000020177 #15 RETSAT (ENSSTOG00000026131) #16 ELMOD3 (ENSSTOG00000009420) #17 CAPG (ENSSTOG00000009431) #18 ENSSTOG00000010788 #19 MAT2A (ENSSTOG00000010796) #20 GGCX (ENSSTOG00000010797) #21 VAMP8 (ENSSTOG00000005962) #22 VAMP5 (ENSSTOG00000005966) #23 RNF181 (ENSSTOG00000005973) #24 TMEM150A (ENSSTOG00000023355) #25 C2orf68 (ENSSTOG00000032886) #26 USP39 (ENSSTOG00000015986) #27 SFTPB (ENSSTOG00000026197) #28 ENSSTOG00000033478 ATOH8 (ENSSTOG00000006538) #29 ST3GAL5 (ENSSTOG00000024816) #30 ENSSTOG00000012609 POLR1A (ENSSTOG00000012580) #31 PTCD3 (ENSSTOG00000012611) #32 IMMT (ENSSTOG00000012624) #33 MRPL35 (ENSSTOG00000030233) #34 REEP1 (ENSSTOG00000025141) #35 Arctic ground squirrel MODERN SPECIES 609 IGKC (ENSUPAG00010018047) RPIA (ENSUPAG00010018051) ENSUPAG00010018060 TCF7L1 (ENSUPAG00010018088) #14 ENSUPAG00010018102 #15 RETSAT (ENSUPAG00010018105) #16 ELMOD3 (ENSUPAG00010018158) #17 CAPG (ENSUPAG00010018187) #18 SH2D6 (ENSUPAG00010018214) #19 MAT2A (ENSUPAG00010000075) #20 GGCX (ENSUPAG00010000144) #21 VAMP8 (ENSUPAG00010000178) #22 ENSUPAG00010000192 #23 TMEM150A (ENSUPAG00010000226) #25 RNF181 (ENSUPAG00010000242) #24 ENSUPAG00010000260 #26 USP39 (ENSUPAG00010000286) #27 SFTPB (ENSUPAG00010000319) #28 ENSUPAG00010000360 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005019338 ENSSVLG00005019271 ENSSVLG00005018002 ENSSVLG00005017863 ENSSVLG00005017786 TCF7L1 (ENSSVLG00005017741) #14 ENSSVLG00005017693 #15 RETSAT (ENSSVLG00005017559) #16 ELMOD3 (ENSSVLG00005017414) #17 CAPG (ENSSVLG00005017210) #18 ENSSVLG00005017177 SH2D6 (ENSSVLG00005016979) #19 MAT2A (ENSSVLG00005016926) #20 ENSSVLG00005016868 GGCX (ENSSVLG00005016698) #21 VAMP8 (ENSSVLG00005016627) #22 VAMP5 (ENSSVLG00005016585) #23 RNF181 (ENSSVLG00005016555) #24 TMEM150A (ENSSVLG00005016477) #25 ENSSVLG00005016431 #26 USP39 (ENSSVLG00005016257) #27 SFTPB (ENSSVLG00005015980) #28 ATOH8 (ENSSVLG00005015922) #29 ST3GAL5 (ENSSVLG00005015795) #30 POLR1A (ENSSVLG00005015696) #31 PTCD3 (ENSSVLG00005016912) #32 IMMT (ENSSVLG00005016785) #33 MRPL35 (ENSSVLG00005016713) #34 REEP1 (ENSSVLG00005016418) #35 KDM3A (ENSSVLG00005016348) #36 CHMP3 (ENSSVLG00005016280) #37 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000162300 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Myomorpha ANCESTRAL SPECIES 37 ENSGT00940000154447.y.a.b ##7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Muroidea ANCESTRAL SPECIES 38 ENSGT00940000154447.y.a.b ##7 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1096 ENSNGAG00000009815 Jkampl (ENSNGAG00000013694) ENSNGAG00000023092 Suclg1 (ENSNGAG00000015283) #11 ENSNGAG00000013792 Dnah6 (ENSNGAG00000013760) #12 Tmsb10b (ENSNGAG00000016585) ENSNGAG00000017279 #13 Tcf7l1 (ENSNGAG00000020122) #14 Retsat (ENSNGAG00000007772) #16 Elmod3 (ENSNGAG00000017699) #17 Capg (ENSNGAG00000019315) #18 Sh2d6 (ENSNGAG00000000856) #19 Mat2a (ENSNGAG00000014289) #20 Ggcx (ENSNGAG00000000695) #21 ENSNGAG00000014911 #22 Vamp5 (ENSNGAG00000022303) #23 ENSNGAG00000010364 #24 Tmem150a (ENSNGAG00000000493) #25 0610030E20Rik (ENSNGAG00000012174) #26 Usp39 (ENSNGAG00000018760) #27 Sftpb (ENSNGAG00000020909) #28 Atoh8 (ENSNGAG00000017424) #29 ENSNGAG00000017959 St3gal5 (ENSNGAG00000020246) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 1224 Stab2 (ENSNGAG00000001493) Nt5dc3 (ENSNGAG00000018361) Hsp90b1 (ENSNGAG00000014447) ENSNGAG00000013621 Tdg (ENSNGAG00000000667) Glt8d2 (ENSNGAG00000002040) Hcfc2 (ENSNGAG00000019076) Nfyb (ENSNGAG00000017224) Eid3 (ENSNGAG00000019100) ENSNGAG00000019222 Chst11 (ENSNGAG00000017327) ENSNGAG00000015399 #22 Slc41a2 (ENSNGAG00000013889) Nopchap1 (ENSNGAG00000012316) Aldh1l2 (ENSNGAG00000020174) ENSNGAG00000019266 Washc4 (ENSNGAG00000015936) ENSNGAG00000014686 1500009L16Rik (ENSNGAG00000013967) Nuak1 (ENSNGAG00000011987) Ckap4 (ENSNGAG00000015103) Tcp11l2 (ENSNGAG00000012830) Polr3b (ENSNGAG00000011308) Rfx4 (ENSNGAG00000000351) Ric8b (ENSNGAG00000018867) Tmem263 (ENSNGAG00000015885) Mterf2 (ENSNGAG00000000529) Muroidea_A ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Cricetidae ANCESTRAL SPECIES 3 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000154447.y.a.b ##7 ENSGT01030000234543.A.a #10 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Chinese hamster chok1gshd MODERN SPECIES 242 Ctnna2 (ENSCGRG00001000241) #10 Jkampl (ENSCGRG00001016234) Suclg1 (ENSCGRG00001007965) #11 Dnah6 (ENSCGRG00001001087) #12 ENSCGRG00001017576 Tmsb10b (ENSCGRG00001017927) Kcmf1 (ENSCGRG00001018737) #13 Tcf7l1 (ENSCGRG00001021396) #14 ENSCGRG00001022789 #15 Retsat (ENSCGRG00001023894) #16 Elmod3 (ENSCGRG00001000477) #17 Capg (ENSCGRG00001001836) #18 Sh2d6 (ENSCGRG00001007691) #19 Mat2a (ENSCGRG00001010053) #20 Ggcx (ENSCGRG00001012860) #21 Vamp8 (ENSCGRG00001014727) #22 Vamp5 (ENSCGRG00001015261) #23 Tmem150a (ENSCGRG00001016577) #25 Rnf181 (ENSCGRG00001017863) 0610030E20Rik (ENSCGRG00001019313) #26 Usp39 (ENSCGRG00001019807) #27 Sftpb (ENSCGRG00001020533) #28 Atoh8 (ENSCGRG00001000824) #29 St3gal5 (ENSCGRG00001002527) #30 ENSCGRG00001015637 Polr1a (ENSCGRG00001006651) #31 Ptcd3 (ENSCGRG00001010361) #32 Immt (ENSCGRG00001013917) #33 Mrpl35 (ENSCGRG00001016701) #34 Reep1 (ENSCGRG00001018917) #35 Kdm3a (ENSCGRG00001020421) #36 Golden Hamster MODERN SPECIES 675 Sh2d6 (ENSMAUG00000000137) #19 Mat2a (ENSMAUG00000010463) #20 Ggcx (ENSMAUG00000014325) #21 Vamp8 (ENSMAUG00000018469) #22 Vamp5 (ENSMAUG00000010363) #23 ENSMAUG00000015068 #24 Tmem150a (ENSMAUG00000012394) #25 0610030E20Rik (ENSMAUG00000011957) #26 Usp39 (ENSMAUG00000009400) #27 Sftpb (ENSMAUG00000008956) #28 Atoh8 (ENSMAUG00000008236) #29 St3gal5 (ENSMAUG00000012326) #30 Polr1a (ENSMAUG00000008497) #31 Ptcd3 (ENSMAUG00000000145) #32 Immt (ENSMAUG00000011453) #33 Mrpl35 (ENSMAUG00000009361) #34 Reep1 (ENSMAUG00000013117) #35 Kdm3a (ENSMAUG00000006230) #36 Chmp3 (ENSMAUG00000009081) #37 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Prairie vole MODERN SPECIES 83 ENSMOCG00000004435 Suclg1 (ENSMOCG00000021421) #11 Dnah6 (ENSMOCG00000002417) #12 ENSMOCG00000012602 Kcmf1 (ENSMOCG00000003279) #13 Tcf7l1 (ENSMOCG00000012953) #14 ENSMOCG00000000091 #15 Retsat (ENSMOCG00000021447) #16 ENSMOCG00000000675 ENSMOCG00000002524 Elmod3 (ENSMOCG00000015870) #17 Capg (ENSMOCG00000005806) #18 Sh2d6 (ENSMOCG00000015508) #19 ENSMOCG00000011611 #20 Ggcx (ENSMOCG00000017281) #21 Vamp8 (ENSMOCG00000004037) #22 Vamp5 (ENSMOCG00000014948) #23 ENSMOCG00000020563 #24 Tmem150a (ENSMOCG00000012440) #25 0610030E20Rik (ENSMOCG00000022948) #26 Usp39 (ENSMOCG00000014162) #27 Sftpb (ENSMOCG00000003084) #28 Atoh8 (ENSMOCG00000019812) #29 St3gal5 (ENSMOCG00000005961) #30 Polr1a (ENSMOCG00000000122) #31 Ptcd3 (ENSMOCG00000019181) #32 Immt (ENSMOCG00000000827) #33 Mrpl35 (ENSMOCG00000008652) #34 Reep1 (ENSMOCG00000013750) #35 Kdm3a (ENSMOCG00000011851) #36 Chmp3 (ENSMOCG00000022847) #37 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000029513 Jkampl (ENSPEMG00000024694) Suclg1 (ENSPEMG00000010810) #11 Dnah6 (ENSPEMG00000023939) #12 ENSPEMG00000030958 ENSPEMG00000026592 Kcmf1 (ENSPEMG00000029405) #13 Tcf7l1 (ENSPEMG00000004714) #14 Tgoln1 (ENSPEMG00000007145) #15 Retsat (ENSPEMG00000011191) #16 Elmod3 (ENSPEMG00000010510) #17 Capg (ENSPEMG00000018215) #18 Sh2d6 (ENSPEMG00000016371) #19 Mat2a (ENSPEMG00000015257) #20 Ggcx (ENSPEMG00000013327) #21 Vamp8 (ENSPEMG00000029313) #22 Vamp5 (ENSPEMG00000027040) #23 ENSPEMG00000010283 #24 Tmem150a (ENSPEMG00000018551) #25 0610030E20Rik (ENSPEMG00000025650) #26 Usp39 (ENSPEMG00000030030) #27 Sftpb (ENSPEMG00000013792) #28 Atoh8 (ENSPEMG00000014683) #29 St3gal5 (ENSPEMG00000022543) #30 ENSPEMG00000023889 Polr1a (ENSPEMG00000022224) #31 Ptcd3 (ENSPEMG00000024106) #32 Immt (ENSPEMG00000009199) #33 Mrpl35 (ENSPEMG00000021175) #34 Reep1 (ENSPEMG00000021271) #35 Kdm3a (ENSPEMG00000020813) #36 Murinae ANCESTRAL SPECIES 4 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus ANCESTRAL SPECIES 12 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus_B ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mouse MODERN SPECIES 15 Ctnna2 (ENSMUSG00000063063) #10 Gm9008 (ENSMUSG00000072476) Jkampl (ENSMUSG00000056197) Suclg1 (ENSMUSG00000052738) #11 Dnah6 (ENSMUSG00000052861) #12 Tmsb10 (ENSMUSG00000079523) Kcmf1 (ENSMUSG00000055239) #13 Tcf7l1 (ENSMUSG00000055799) #14 Tgoln1 (ENSMUSG00000056429) #15 Retsat (ENSMUSG00000056666) #16 Elmod3 (ENSMUSG00000056698) #17 Capg (ENSMUSG00000056737) #18 Sh2d6 (ENSMUSG00000052631) #19 Mat2a (ENSMUSG00000053907) #20 Ggcx (ENSMUSG00000053460) #21 Vamp8 (ENSMUSG00000050732) #22 Vamp5 (ENSMUSG00000073002) #23 Rnf181 (ENSMUSG00000055850) Tmem150a (ENSMUSG00000055912) #25 0610030E20Rik (ENSMUSG00000058706) #26 Usp39 (ENSMUSG00000056305) #27 Sftpb (ENSMUSG00000056370) #28 Atoh8 (ENSMUSG00000037621) #29 St3gal5 (ENSMUSG00000056091) #30 Polr1a (ENSMUSG00000049553) #31 Ptcd3 (ENSMUSG00000063884) #32 Immt (ENSMUSG00000052337) #33 Mrpl35 (ENSMUSG00000052962) #34 Reep1 (ENSMUSG00000052852) #35 Kdm3a (ENSMUSG00000053470) #36 Chmp3 (ENSMUSG00000053119) #37 Mus_C ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00390000018097.j ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00940000162822 #19 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 spretus MODERN SPECIES 15 Lrrtm1 (MGP_SPRETEiJ_G0029523) #9 Ctnna2 (MGP_SPRETEiJ_G0029522) #10 Jkampl (MGP_SPRETEiJ_G0029521) Suclg1 (MGP_SPRETEiJ_G0029520) #11 Dnah6 (MGP_SPRETEiJ_G0029519) #12 MGP_SPRETEiJ_G0029518 Kcmf1 (MGP_SPRETEiJ_G0029517) #13 Tcf7l1 (MGP_SPRETEiJ_G0029516) #14 Tgoln1 (MGP_SPRETEiJ_G0029515) #15 Retsat (MGP_SPRETEiJ_G0029514) #16 Elmod3 (MGP_SPRETEiJ_G0029513) #17 Capg (MGP_SPRETEiJ_G0029512) #18 MGP_SPRETEiJ_G0029511 #19 Mat2a (MGP_SPRETEiJ_G0029510) #20 Ggcx (MGP_SPRETEiJ_G0029509) #21 Vamp8 (MGP_SPRETEiJ_G0029508) #22 Vamp5 (MGP_SPRETEiJ_G0029507) #23 Rnf181 (MGP_SPRETEiJ_G0029506) Tmem150a (MGP_SPRETEiJ_G0029505) #25 0610030E20Rik (MGP_SPRETEiJ_G0029504) #26 Usp39 (MGP_SPRETEiJ_G0029503) #27 Sftpb (MGP_SPRETEiJ_G0029502) #28 Atoh8 (MGP_SPRETEiJ_G0029501) #29 St3gal5 (MGP_SPRETEiJ_G0029500) #30 Polr1a (MGP_SPRETEiJ_G0029499) #31 Ptcd3 (MGP_SPRETEiJ_G0029498) #32 Immt (MGP_SPRETEiJ_G0029497) #33 Mrpl35 (MGP_SPRETEiJ_G0029496) #34 MGP_SPRETEiJ_G0029495 #35 Kdm3a (MGP_SPRETEiJ_G0029494) #36 Chmp3 (MGP_SPRETEiJ_G0029493) #37 Steppe mouse MODERN SPECIES 3287 ENSMSIG00000006995 Suclg1 (ENSMSIG00000007008) #11 ENSMSIG00000007054 ENSMSIG00000007062 Dnah6 (ENSMSIG00000007091) #12 Tmsb10b (ENSMSIG00000007285) Kcmf1 (ENSMSIG00000007304) #13 Tcf7l1 (ENSMSIG00000007365) #14 ENSMSIG00000007493 #15 Retsat (ENSMSIG00000007552) #16 Elmod3 (ENSMSIG00000007675) #17 Capg (ENSMSIG00000007704) #18 Sh2d6 (ENSMSIG00000007788) #19 Mat2a (ENSMSIG00000007887) #20 Ggcx (ENSMSIG00000007972) #21 Vamp8 (ENSMSIG00000008076) #22 ENSMSIG00000008096 #23 ENSMSIG00000008118 #24 Tmem150a (ENSMSIG00000008166) #25 0610030E20Rik (ENSMSIG00000008200) #26 Usp39 (ENSMSIG00000008226) #27 Sftpb (ENSMSIG00000008238) #28 Atoh8 (ENSMSIG00000008291) #29 St3gal5 (ENSMSIG00000008306) #30 ENSMSIG00000008349 Polr1a (ENSMSIG00000008358) #31 Ptcd3 (ENSMSIG00000008420) #32 Immt (ENSMSIG00000008522) #33 Mrpl35 (ENSMSIG00000009352) #34 Reep1 (ENSMSIG00000009384) #35 Kdm3a (ENSMSIG00000009485) #36 Ryukyu mouse MODERN SPECIES 15 Lrrtm1 (MGP_CAROLIEiJ_G0028518) #9 Ctnna2 (MGP_CAROLIEiJ_G0028517) #10 Jkampl (MGP_CAROLIEiJ_G0028516) Suclg1 (MGP_CAROLIEiJ_G0028515) #11 Dnah6 (MGP_CAROLIEiJ_G0028514) #12 Tmsb10 (MGP_CAROLIEiJ_G0028513) Kcmf1 (MGP_CAROLIEiJ_G0028512) #13 Tcf7l1 (MGP_CAROLIEiJ_G0028511) #14 Tgoln1 (MGP_CAROLIEiJ_G0028510) #15 Retsat (MGP_CAROLIEiJ_G0028509) #16 Elmod3 (MGP_CAROLIEiJ_G0028508) #17 Capg (MGP_CAROLIEiJ_G0028507) #18 Sh2d6 (MGP_CAROLIEiJ_G0028506) #19 Mat2a (MGP_CAROLIEiJ_G0028505) #20 Ggcx (MGP_CAROLIEiJ_G0028504) #21 Vamp8 (MGP_CAROLIEiJ_G0028503) #22 Vamp5 (MGP_CAROLIEiJ_G0028502) #23 MGP_CAROLIEiJ_G0028501 #24 Tmem150a (MGP_CAROLIEiJ_G0028500) #25 0610030E20Rik (MGP_CAROLIEiJ_G0028499) #26 Usp39 (MGP_CAROLIEiJ_G0028498) #27 Sftpb (MGP_CAROLIEiJ_G0028497) #28 Atoh8 (MGP_CAROLIEiJ_G0028496) #29 St3gal5 (MGP_CAROLIEiJ_G0028495) #30 Polr1a (MGP_CAROLIEiJ_G0028494) #31 Ptcd3 (MGP_CAROLIEiJ_G0028493) #32 Immt (MGP_CAROLIEiJ_G0028492) #33 Mrpl35 (MGP_CAROLIEiJ_G0028491) #34 MGP_CAROLIEiJ_G0028490 #35 Kdm3a (MGP_CAROLIEiJ_G0028489) #36 Chmp3 (MGP_CAROLIEiJ_G0028488) #37 Shrew mouse MODERN SPECIES 11 Lrrtm1 (MGP_PahariEiJ_G0022253) #9 Ctnna2 (MGP_PahariEiJ_G0022252) #10 Jkampl (MGP_PahariEiJ_G0022251) Suclg1 (MGP_PahariEiJ_G0022250) #11 Dnah6 (MGP_PahariEiJ_G0022249) #12 Tmsb10 (MGP_PahariEiJ_G0022248) Kcmf1 (MGP_PahariEiJ_G0022247) #13 Tcf7l1 (MGP_PahariEiJ_G0022246) #14 MGP_PahariEiJ_G0022245 #15 Retsat (MGP_PahariEiJ_G0022244) #16 Elmod3 (MGP_PahariEiJ_G0022243) #17 Capg (MGP_PahariEiJ_G0022242) #18 Sh2d6 (MGP_PahariEiJ_G0022241) #19 Mat2a (MGP_PahariEiJ_G0022240) #20 Ggcx (MGP_PahariEiJ_G0022239) #21 Vamp8 (MGP_PahariEiJ_G0022238) #22 Rnf181 (MGP_PahariEiJ_G0022237) Tmem150a (MGP_PahariEiJ_G0022236) #25 0610030E20Rik (MGP_PahariEiJ_G0022235) #26 Usp39 (MGP_PahariEiJ_G0022234) #27 Sftpb (MGP_PahariEiJ_G0022233) #28 Atoh8 (MGP_PahariEiJ_G0022232) #29 St3gal5 (MGP_PahariEiJ_G0022231) #30 Polr1a (MGP_PahariEiJ_G0022230) #31 Ptcd3 (MGP_PahariEiJ_G0022229) #32 Immt (MGP_PahariEiJ_G0022228) #33 Mrpl35 (MGP_PahariEiJ_G0022227) #34 MGP_PahariEiJ_G0022226 #35 Kdm3a (MGP_PahariEiJ_G0022225) #36 Chmp3 (MGP_PahariEiJ_G0022224) #37 Rnf103 (MGP_PahariEiJ_G0022223) Rat MODERN SPECIES 14 ENSRNOG00000071146 Ptbp1-ps3 (ENSRNOG00000070516) Jkampl (ENSRNOG00000024604) Suclg1 (ENSRNOG00000005587) #11 Dnah6 (ENSRNOG00000015581) #12 Tmsb10 (ENSRNOG00000064090) Kcmf1 (ENSRNOG00000015097) #13 Tcf7l1 (ENSRNOG00000014753) #14 Tgoln2 (ENSRNOG00000014617) #15 Retsat (ENSRNOG00000014090) #16 Elmod3 (ENSRNOG00000038102) #17 Capg (ENSRNOG00000013668) #18 Sh2d6 (ENSRNOG00000013605) #19 Mat2a (ENSRNOG00000013520) #20 Ggcx (ENSRNOG00000012975) #21 Vamp8 (ENSRNOG00000012748) #22 Vamp5 (ENSRNOG00000012659) #23 Rnf181 (ENSRNOG00000012035) #24 Tmem150a (ENSRNOG00000061100) #25 LOC691113 (ENSRNOG00000011713) #26 Usp39 (ENSRNOG00000010930) #27 Sftpb (ENSRNOG00000010761) #28 Atoh8 (ENSRNOG00000010716) #29 ENSRNOG00000065207 St3gal5 (ENSRNOG00000010284) #30 Polr1a (ENSRNOG00000009545) #31 Ptcd3 (ENSRNOG00000009484) #32 Immt (ENSRNOG00000009097) #33 Mrpl35 (ENSRNOG00000008546) #34 Reep1 (ENSRNOG00000008481) #35 Kdm3a (ENSRNOG00000007814) #36 Lesser Egyptian jerboa MODERN SPECIES 77 Suclg1 (ENSJJAG00000023782) #11 ENSJJAG00000020479 Dnah6 (ENSJJAG00000013999) #12 ENSJJAG00000009987 ENSJJAG00000006387 Kcmf1 (ENSJJAG00000020771) #13 ENSJJAG00000010136 Tcf7l1 (ENSJJAG00000023485) #14 ENSJJAG00000022764 Retsat (ENSJJAG00000018206) #16 Elmod3 (ENSJJAG00000015903) #17 Capg (ENSJJAG00000011988) #18 Sh2d6 (ENSJJAG00000011036) #19 Mat2a (ENSJJAG00000019942) #20 Ggcx (ENSJJAG00000013219) #21 Vamp8 (ENSJJAG00000023575) #22 Vamp5 (ENSJJAG00000021713) #23 ENSJJAG00000012435 #24 Tmem150a (ENSJJAG00000015485) #25 Sftpb (ENSJJAG00000020339) #28 Atoh8 (ENSJJAG00000003684) #29 St3gal5 (ENSJJAG00000012802) #30 Polr1a (ENSJJAG00000013113) #31 ENSJJAG00000012431 #32 Immt (ENSJJAG00000015348) #33 Reep1 (ENSJJAG00000021695) #35 Kdm3a (ENSJJAG00000022464) #36 ENSJJAG00000016934 #37 ENSJJAG00000004517 Rnf103 (ENSJJAG00000013104) ENSJJAG00000002281 Kangaroo rat MODERN SPECIES 528 Suclg1 (ENSDORG00000010991) #11 Dnah6 (ENSDORG00000000400) #12 Tmsb10b (ENSDORG00000025129) Kcmf1 (ENSDORG00000029229) #13 Tcf7l1 (ENSDORG00000013753) #14 Retsat (ENSDORG00000009720) #16 Elmod3 (ENSDORG00000009721) #17 Capg (ENSDORG00000009722) #18 Sh2d6 (ENSDORG00000013882) #19 Mat2a (ENSDORG00000011312) #20 Ggcx (ENSDORG00000006726) #21 Vamp8 (ENSDORG00000010738) #22 Vamp5 (ENSDORG00000027327) #23 ENSDORG00000010740 #24 Tmem150a (ENSDORG00000010742) #25 0610030E20Rik (ENSDORG00000030143) #26 Usp39 (ENSDORG00000010746) #27 Sftpb (ENSDORG00000010751) #28 Atoh8 (ENSDORG00000028892) #29 St3gal5 (ENSDORG00000008296) #30 Polr1a (ENSDORG00000008298) #31 Ptcd3 (ENSDORG00000008305) #32 ENSDORG00000001073 #33 Lagomorpha ANCESTRAL SPECIES 47 ENSGT01030000234543.A.a #10 ENSGT00940000161705 #9 ENSGT00940000156351 #11 ENSGT00940000154761 #12 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 #13 ENSGT00940000157038 #14 ENSGT00530000064712 #15 ENSGT00390000017613 #16 ENSGT00390000009488 #17 ENSGT00940000159305 #18 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Rabbit MODERN SPECIES 11 ENSOCUG00000032531 ENSOCUG00000031742 DNAH6 (ENSOCUG00000010057) #12 TMSB10 (ENSOCUG00000017506) TRABD2A (ENSOCUG00000010075) ENSOCUG00000035044 #13 ENSOCUG00000002533 #13 TCF7L1 (ENSOCUG00000008749) #14 ENSOCUG00000008764 #15 RETSAT (ENSOCUG00000026865) #16 ELMOD3 (ENSOCUG00000002332) #17 CAPG (ENSOCUG00000002341) #18 ENSOCUG00000039138 MAT2A (ENSOCUG00000002361) #20 GGCX (ENSOCUG00000002368) #21 VAMP8 (ENSOCUG00000002375) #22 VAMP5 (ENSOCUG00000025906) #23 ENSOCUG00000007951 #24 TMEM150A (ENSOCUG00000007956) #25 ENSOCUG00000010066 #26 USP39 (ENSOCUG00000010070) #27 ENSOCUG00000020733 #28 ATOH8 (ENSOCUG00000003528) #29 ST3GAL5 (ENSOCUG00000010126) #30 POLR1A (ENSOCUG00000010138) #31 ENSOCUG00000010161 #32 IMMT (ENSOCUG00000010178) #33 ENSOCUG00000010188 MRPL35 (ENSOCUG00000010193) #34 REEP1 (ENSOCUG00000010196) #35 ENSOCUG00000034180 Pika MODERN SPECIES 3193 MAT2A (ENSOPRG00000001898) #20 GGCX (ENSOPRG00000001919) #21 VAMP8 (ENSOPRG00000001958) #22 ENSOPRG00000001972 RNF181 (ENSOPRG00000001980) #24 TMEM150A (ENSOPRG00000001987) #25 C2orf68 (ENSOPRG00000002005) #26 USP39 (ENSOPRG00000002019) #27 SFTPB (ENSOPRG00000002060) #28 ST3GAL5 (ENSOPRG00000002085) #30