Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 630 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01090000262771 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 Euteleostomi ANCESTRAL SPECIES 675 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 Sarcopterygii ANCESTRAL SPECIES 210 ENSGT00950000183109.c.b ENSGT00940000155596 ENSGT00940000156317 ENSGT00940000161102 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000155715 ENSGT00940000162006 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 Tetrapoda ANCESTRAL SPECIES 61 ENSGT00390000007636 ENSGT00940000155596 ENSGT00940000156317 ENSGT00940000161102 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00940000155061.b ENSGT00950000182943 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000158973.b Amniota ANCESTRAL SPECIES 57 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b ENSGT00950000182943.kb.a ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 Mammalia ANCESTRAL SPECIES 67 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b ENSGT00950000182943.jb ENSGT00530000063691.a ENSGT00940000162631 Theria ANCESTRAL SPECIES 13 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Primates ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000163728 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Lemuriformes ANCESTRAL SPECIES 19 ENSGT00940000163728 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Lemuriformes_a ANCESTRAL SPECIES 36 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00910000147626 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.o.a #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Greater bamboo lemur MODERN SPECIES 614 MAT2A (ENSPSMG00000023856) #20 GGCX (ENSPSMG00000023829) #21 VAMP8 (ENSPSMG00000023814) #22 VAMP5 (ENSPSMG00000023800) #23 RNF181 (ENSPSMG00000023793) #24 TMEM150A (ENSPSMG00000023779) #25 C2orf68 (ENSPSMG00000023768) #26 USP39 (ENSPSMG00000023744) #27 SFTPB (ENSPSMG00000023656) #28 ATOH8 (ENSPSMG00000023652) #29 ST3GAL5 (ENSPSMG00000023620) #30 POLR1A (ENSPSMG00000023525) #31 PTCD3 (ENSPSMG00000023446) #32 IMMT (ENSPSMG00000023275) #33 ENSPSMG00000023191 #34 REEP1 (ENSPSMG00000023171) #35 KDM3A (ENSPSMG00000023071) #36 CHMP3 (ENSPSMG00000022960) #37 Coquerels sifaka MODERN SPECIES 300 ENSPCOG00000012720 DNAH6 (ENSPCOG00000021699) TMSB10 (ENSPCOG00000020577) KCMF1 (ENSPCOG00000024804) TCF7L1 (ENSPCOG00000027574) RETSAT (ENSPCOG00000018203) ELMOD3 (ENSPCOG00000016503) CAPG (ENSPCOG00000017087) ENSPCOG00000027552 MAT2A (ENSPCOG00000013199) #20 GGCX (ENSPCOG00000017501) #21 VAMP8 (ENSPCOG00000025762) #22 VAMP5 (ENSPCOG00000008979) #23 RNF181 (ENSPCOG00000019878) #24 TMEM150A (ENSPCOG00000019283) #25 C2orf68 (ENSPCOG00000017415) #26 USP39 (ENSPCOG00000018540) #27 ENSPCOG00000027418 #28 ATOH8 (ENSPCOG00000022872) #29 ST3GAL5 (ENSPCOG00000028704) #30 POLR1A (ENSPCOG00000026987) #31 PTCD3 (ENSPCOG00000005822) #32 IMMT (ENSPCOG00000028075) #33 MRPL35 (ENSPCOG00000007856) #34 REEP1 (ENSPCOG00000004132) #35 KDM3A (ENSPCOG00000008403) #36 CHMP3 (ENSPCOG00000018240) #37 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 26 LRRTM1 (ENSMICG00000038543) SUCLG1 (ENSMICG00000005754) DNAH6 (ENSMICG00000015331) ENSMICG00000035690 ENSMICG00000015388 TMSB10 (ENSMICG00000047627) KCMF1 (ENSMICG00000046646) TCF7L1 (ENSMICG00000016146) ENSMICG00000041852 RETSAT (ENSMICG00000016157) ELMOD3 (ENSMICG00000014497) CAPG (ENSMICG00000015066) ENSMICG00000015081 MAT2A (ENSMICG00000011458) #20 GGCX (ENSMICG00000011475) #21 ENSMICG00000035021 #22 VAMP5 (ENSMICG00000011486) #23 RNF181 (ENSMICG00000011489) #24 TMEM150A (ENSMICG00000026572) #25 C2orf68 (ENSMICG00000044296) #26 USP39 (ENSMICG00000011500) #27 SFTPB (ENSMICG00000011514) #28 ATOH8 (ENSMICG00000007934) #29 ST3GAL5 (ENSMICG00000045558) #30 POLR1A (ENSMICG00000000757) #31 PTCD3 (ENSMICG00000000761) #32 IMMT (ENSMICG00000000770) #33 MRPL35 (ENSMICG00000000776) #34 REEP1 (ENSMICG00000000777) #35 KDM3A (ENSMICG00000000781) #36 ENSMICG00000005492 #37 Mouse lemur MODERN SPECIES 10 ENSMICG00000029575 ENSMICG00000033758 ENSMICG00000033941 ADCYAP1 (ENSMICG00000030488) YES1 (ENSMICG00000028620) ENOSF1 (ENSMICG00000014847) TYMS (ENSMICG00000014830) CLUL1 (ENSMICG00000017333) COLEC12 (ENSMICG00000004528) THOC1 (ENSMICG00000027200) USP14 (ENSMICG00000009020) ROCK1 (ENSMICG00000014892) GREB1L (ENSMICG00000013562) ESCO1 (ENSMICG00000008993) SNRPD1 (ENSMICG00000044066) ENSMICG00000034736 #22 ABHD3 (ENSMICG00000002109) MIB1 (ENSMICG00000007890) GATA6 (ENSMICG00000044131) ENSMICG00000014338 RBBP8 (ENSMICG00000009274) CABLES1 (ENSMICG00000009282) TMEM241 (ENSMICG00000009287) RIOK3 (ENSMICG00000009293) RMC1 (ENSMICG00000009300) NPC1 (ENSMICG00000009311) ANKRD29 (ENSMICG00000009326) LAMA3 (ENSMICG00000009335) TTC39C (ENSMICG00000009394) ENSMICG00000044405 OSBPL1A (ENSMICG00000014621) Bushbaby MODERN SPECIES 262 SUCLG1 (ENSOGAG00000004142) DNAH6 (ENSOGAG00000011781) ENSOGAG00000002147 KCMF1 (ENSOGAG00000034863) TCF7L1 (ENSOGAG00000001078) ENSOGAG00000032714 RETSAT (ENSOGAG00000001079) ELMOD3 (ENSOGAG00000001081) CAPG (ENSOGAG00000001084) MAT2A (ENSOGAG00000026925) #20 GGCX (ENSOGAG00000010470) #21 VAMP8 (ENSOGAG00000012281) #22 VAMP5 (ENSOGAG00000012283) #23 RNF181 (ENSOGAG00000012284) #24 TMEM150A (ENSOGAG00000012288) #25 C2orf68 (ENSOGAG00000033817) #26 USP39 (ENSOGAG00000012291) #27 SFTPB (ENSOGAG00000012294) #28 ATOH8 (ENSOGAG00000025987) #29 ST3GAL5 (ENSOGAG00000016459) #30 POLR1A (ENSOGAG00000004031) #31 PTCD3 (ENSOGAG00000004040) #32 ENSOGAG00000004046 #33 MRPL35 (ENSOGAG00000004048) #34 REEP1 (ENSOGAG00000004049) #35 KDM3A (ENSOGAG00000011445) #36 ENSOGAG00000030818 Haplorrhini ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.q ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Tarsier MODERN SPECIES 1905 ENSTSYG00000033439 ENSTSYG00000036288 #20 GGCX (ENSTSYG00000008648) #21 VAMP8 (ENSTSYG00000009911) #22 VAMP5 (ENSTSYG00000001454) #23 RNF181 (ENSTSYG00000007140) #24 TMEM150A (ENSTSYG00000034230) #25 ENSTSYG00000027566 #26 USP39 (ENSTSYG00000000260) #27 SFTPB (ENSTSYG00000031502) #28 Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.q ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Catarrhini ANCESTRAL SPECIES 17 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00910000147626 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Hominoidea ANCESTRAL SPECIES 18 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Hominidae ANCESTRAL SPECIES 19 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Pan ANCESTRAL SPECIES 17 ENSGT00940000163007 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.a.b ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000012818.o.a.a.b ENSGT00910000147626 ENSGT00910000147298 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371.e #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Bonobo MODERN SPECIES 14 TMSB10 (ENSPPAG00000012732) ENSPPAG00000037652 KCMF1 (ENSPPAG00000031415) TCF7L1 (ENSPPAG00000030803) ENSPPAG00000035809 ENSPPAG00000036633 ENSPPAG00000041446 ENSPPAG00000043071 ENSPPAG00000032707 RETSAT (ENSPPAG00000031643) ELMOD3 (ENSPPAG00000027146) CAPG (ENSPPAG00000035666) ENSPPAG00000037603 MAT2A (ENSPPAG00000041128) #20 GGCX (ENSPPAG00000031307) #21 VAMP8 (ENSPPAG00000031084) #22 VAMP5 (ENSPPAG00000031044) #23 RNF181 (ENSPPAG00000031062) #24 TMEM150A (ENSPPAG00000029677) #25 C2orf68 (ENSPPAG00000027113) #26 USP39 (ENSPPAG00000028703) #27 SFTPB (ENSPPAG00000028425) #28 ENSPPAG00000029229 ATOH8 (ENSPPAG00000038955) #29 ST3GAL5 (ENSPPAG00000030557) #30 POLR1A (ENSPPAG00000042450) #31 PTCD3 (ENSPPAG00000027578) #32 IMMT (ENSPPAG00000031689) #33 MRPL35 (ENSPPAG00000042773) #34 REEP1 (ENSPPAG00000040193) #35 ENSPPAG00000036721 #36 Human MODERN SPECIES 11 CTNNA2 (ENSG00000066032) LRRTM1 (ENSG00000162951) SUCLG1 (ENSG00000163541) DNAH6 (ENSG00000115423) TRABD2A (ENSG00000186854) TMSB10 (ENSG00000034510) KCMF1 (ENSG00000176407) TCF7L1 (ENSG00000152284) TGOLN2 (ENSG00000152291) RETSAT (ENSG00000042445) ELMOD3 (ENSG00000115459) CAPG (ENSG00000042493) SH2D6 (ENSG00000152292) MAT2A (ENSG00000168906) #20 GGCX (ENSG00000115486) #21 VAMP8 (ENSG00000118640) #22 VAMP5 (ENSG00000168899) #23 RNF181 (ENSG00000168894) #24 TMEM150A (ENSG00000168890) #25 USP39 (ENSG00000168883) #27 C2orf68 (ENSG00000168887) #26 SFTPB (ENSG00000168878) #28 GNLY (ENSG00000115523) ATOH8 (ENSG00000168874) #29 ST3GAL5 (ENSG00000115525) #30 POLR1A (ENSG00000068654) #31 PTCD3 (ENSG00000132300) #32 IMMT (ENSG00000132305) #33 MRPL35 (ENSG00000132313) #34 REEP1 (ENSG00000068615) #35 KDM3A (ENSG00000115548) #36 Orangutan MODERN SPECIES 14 ENSPPYG00000012243 SUCLG1 (ENSPPYG00000040003) ENSPPYG00000039253 DNAH6 (ENSPPYG00000012240) TRABD2A (ENSPPYG00000012239) TMSB10 (ENSPPYG00000030623) KCMF1 (ENSPPYG00000012235) TCF7L1 (ENSPPYG00000012234) TGOLN2 (ENSPPYG00000012712) RETSAT (ENSPPYG00000012233) ELMOD3 (ENSPPYG00000012232) CAPG (ENSPPYG00000012231) SH2D6 (ENSPPYG00000012230) MAT2A (ENSPPYG00000012229) #20 GGCX (ENSPPYG00000012228) #21 VAMP8 (ENSPPYG00000012227) #22 VAMP5 (ENSPPYG00000036939) #23 RNF181 (ENSPPYG00000012225) #24 TMEM150A (ENSPPYG00000034938) #25 C2orf68 (ENSPPYG00000035994) #26 USP39 (ENSPPYG00000012222) #27 SFTPB (ENSPPYG00000012221) #28 ENSPPYG00000012220 ATOH8 (ENSPPYG00000012219) #29 ST3GAL5 (ENSPPYG00000033548) #30 POLR1A (ENSPPYG00000012217) #31 PTCD3 (ENSPPYG00000012216) #32 IMMT (ENSPPYG00000039510) #33 MRPL35 (ENSPPYG00000032949) #34 REEP1 (ENSPPYG00000012213) #35 KDM3A (ENSPPYG00000012212) #36 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00910000147298 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Vervet Monkey MODERN SPECIES 5 LRRTM1 (ENSCSAG00000019436) CTNNA2 (ENSCSAG00000015885) SUCLG1 (ENSCSAG00000015890) DNAH6 (ENSCSAG00000015982) TRABD2A (ENSCSAG00000016047) ENSCSAG00000016057 ENSCSAG00000019435 TCF7L1 (ENSCSAG00000016081) TGOLN2 (ENSCSAG00000016094) RETSAT (ENSCSAG00000016104) ELMOD3 (ENSCSAG00000016108) CAPG (ENSCSAG00000016141) ENSCSAG00000016162 MAT2A (ENSCSAG00000016171) #20 GGCX (ENSCSAG00000016185) #21 VAMP8 (ENSCSAG00000016190) #22 VAMP5 (ENSCSAG00000016193) #23 RNF181 (ENSCSAG00000016198) #24 TMEM150A (ENSCSAG00000016204) #25 C2orf68 (ENSCSAG00000016209) #26 USP39 (ENSCSAG00000016215) #27 SFTPB (ENSCSAG00000016227) #28 ENSCSAG00000016230 ATOH8 (ENSCSAG00000016234) #29 ST3GAL5 (ENSCSAG00000016237) #30 POLR1A (ENSCSAG00000016251) #31 PTCD3 (ENSCSAG00000016267) #32 IMMT (ENSCSAG00000016310) #33 REEP1 (ENSCSAG00000016327) #35 KDM3A (ENSCSAG00000016343) #36 CHMP3 (ENSCSAG00000016348) #37 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.t ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Macaca ANCESTRAL SPECIES 17 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.t ENSGT00940000157038.e ENSGT00940000157038.f ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929.e #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313.g #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Pig-tailed macaque MODERN SPECIES 341 TRABD2A (ENSMNEG00000043453) TMSB10 (ENSMNEG00000033093) ENSMNEG00000011868 KCMF1 (ENSMNEG00000042627) TCF7L1 (ENSMNEG00000044913) ENSMNEG00000017672 ENSMNEG00000016717 TGOLN2 (ENSMNEG00000034111) RETSAT (ENSMNEG00000043728) ELMOD3 (ENSMNEG00000035964) CAPG (ENSMNEG00000045231) ENSMNEG00000030307 ENSMNEG00000042631 MAT2A (ENSMNEG00000042382) #20 GGCX (ENSMNEG00000023012) #21 VAMP8 (ENSMNEG00000036220) #22 VAMP5 (ENSMNEG00000036172) #23 RNF181 (ENSMNEG00000040275) #24 TMEM150A (ENSMNEG00000014445) #25 C2orf68 (ENSMNEG00000043318) #26 USP39 (ENSMNEG00000040046) #27 SFTPB (ENSMNEG00000030255) #28 GNLY (ENSMNEG00000043254) ATOH8 (ENSMNEG00000041664) #29 ENSMNEG00000032428 #30 POLR1A (ENSMNEG00000043313) #31 PTCD3 (ENSMNEG00000032067) #32 IMMT (ENSMNEG00000030355) #33 MRPL35 (ENSMNEG00000043851) #34 REEP1 (ENSMNEG00000035235) #35 KDM3A (ENSMNEG00000043870) #36 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000161627.a.a.a.a.b.a.a.b.b.a.a ENSGT00940000163007 ENSGT00510000047171.t ENSGT00940000157038.e ENSGT00940000157038.f ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT01030000240253 ENSGT00940000161151 #29 ENSGT00940000157929.e #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313.g #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Rhesus MODERN SPECIES 4 SUCLG1 (ENSMMUG00000000908) DNAH6 (ENSMMUG00000019116) TRABD2A (ENSMMUG00000008855) ENSMMUG00000051834 TMSB10 (ENSMMUG00000056004) ENSMMUG00000062644 KCMF1 (ENSMMUG00000001414) TCF7L1 (ENSMMUG00000020134) TGOLN2 (ENSMMUG00000019417) RETSAT (ENSMMUG00000019416) ELMOD3 (ENSMMUG00000002673) CAPG (ENSMMUG00000002675) SH2D6 (ENSMMUG00000009966) MAT2A (ENSMMUG00000004450) #20 GGCX (ENSMMUG00000004446) #21 VAMP8 (ENSMMUG00000030785) #22 VAMP5 (ENSMMUG00000058122) #23 RNF181 (ENSMMUG00000063098) #24 TMEM150A (ENSMMUG00000062509) #25 C13H2orf68 (ENSMMUG00000050980) #26 ENSMMUG00000051721 USP39 (ENSMMUG00000017820) #27 SFTPB (ENSMMUG00000017818) #28 ENSMMUG00000063583 ATOH8 (ENSMMUG00000047424) #29 ST3GAL5 (ENSMMUG00000019559) #30 POLR1A (ENSMMUG00000015815) #31 PTCD3 (ENSMMUG00000015820) #32 IMMT (ENSMMUG00000015824) #33 MRPL35 (ENSMMUG00000020932) #34 REEP1 (ENSMMUG00000020930) #35 Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000053884 ENSMFAG00000041894 ENSMFAG00000063256 KCMF1 (ENSMFAG00000044887) TCF7L1 (ENSMFAG00000043006) ENSMFAG00000057476 ENSMFAG00000035638 TGOLN2 (ENSMFAG00000002786) RETSAT (ENSMFAG00000001631) ELMOD3 (ENSMFAG00000032988) ENSMFAG00000037110 CAPG (ENSMFAG00000003357) ENSMFAG00000002993 MAT2A (ENSMFAG00000002027) #20 GGCX (ENSMFAG00000045991) #21 VAMP8 (ENSMFAG00000034493) #22 VAMP5 (ENSMFAG00000009769) #23 RNF181 (ENSMFAG00000047260) #24 TMEM150A (ENSMFAG00000003805) #25 C2orf68 (ENSMFAG00000063159) #26 USP39 (ENSMFAG00000041090) #27 SFTPB (ENSMFAG00000040839) #28 ENSMFAG00000063745 ENSMFAG00000004079 ATOH8 (ENSMFAG00000031235) #29 ST3GAL5 (ENSMFAG00000043554) #30 POLR1A (ENSMFAG00000046097) #31 PTCD3 (ENSMFAG00000042757) #32 IMMT (ENSMFAG00000044373) #33 MRPL35 (ENSMFAG00000002964) #34 REEP1 (ENSMFAG00000038270) #35 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.s.a ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Olive baboon MODERN SPECIES 5 ENSPANG00000044948 SUCLG1 (ENSPANG00000018470) DNAH6 (ENSPANG00000017584) TRABD2A (ENSPANG00000026230) TMSB10 (ENSPANG00000045803) KCMF1 (ENSPANG00000007610) TCF7L1 (ENSPANG00000018548) ENSPANG00000050077 TGOLN2 (ENSPANG00000005831) RETSAT (ENSPANG00000009008) ELMOD3 (ENSPANG00000024547) CAPG (ENSPANG00000000842) ENSPANG00000004074 MAT2A (ENSPANG00000024065) #20 GGCX (ENSPANG00000020859) #21 VAMP8 (ENSPANG00000017285) #22 VAMP5 (ENSPANG00000016261) #23 RNF181 (ENSPANG00000024386) #24 TMEM150A (ENSPANG00000006521) #25 USP39 (ENSPANG00000017132) #27 C2orf68 (ENSPANG00000011060) #26 SFTPB (ENSPANG00000011084) #28 GNLY (ENSPANG00000022008) ATOH8 (ENSPANG00000048662) #29 ST3GAL5 (ENSPANG00000022914) #30 POLR1A (ENSPANG00000025908) #31 PTCD3 (ENSPANG00000009006) #32 IMMT (ENSPANG00000012838) #33 MRPL35 (ENSPANG00000025906) #34 REEP1 (ENSPANG00000009005) #35 KDM3A (ENSPANG00000012322) #36 Cercopithecinae_d ANCESTRAL SPECIES 136 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171.s.a ENSGT00940000157038 ENSGT00390000012818.o.a.a.a.a ENSGT00390000017613.q ENSGT00530000064712 ENSGT00910000147298 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305 ENSGT00910000147328 ENSGT00910000146589 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Drill MODERN SPECIES 1471 ENSMLEG00000019792 TCF7L1 (ENSMLEG00000034494) TGOLN2 (ENSMLEG00000032339) ENSMLEG00000042086 RETSAT (ENSMLEG00000035987) ELMOD3 (ENSMLEG00000044317) CAPG (ENSMLEG00000043889) ENSMLEG00000033386 ENSMLEG00000030069 MAT2A (ENSMLEG00000028877) #20 GGCX (ENSMLEG00000029112) #21 VAMP8 (ENSMLEG00000036507) #22 VAMP5 (ENSMLEG00000036477) #23 RNF181 (ENSMLEG00000029338) #24 TMEM150A (ENSMLEG00000033025) #25 C2orf68 (ENSMLEG00000037933) #26 USP39 (ENSMLEG00000030185) #27 SFTPB (ENSMLEG00000034724) #28 GNLY (ENSMLEG00000031388) ATOH8 (ENSMLEG00000038096) #29 ST3GAL5 (ENSMLEG00000037788) #30 Sooty mangabey MODERN SPECIES 123 TRABD2A (ENSCATG00000034302) TMSB10 (ENSCATG00000040005) ENSCATG00000029438 TCF7L1 (ENSCATG00000039504) ENSCATG00000033790 ENSCATG00000024477 TGOLN2 (ENSCATG00000035819) ENSCATG00000036711 RETSAT (ENSCATG00000040068) ELMOD3 (ENSCATG00000037573) CAPG (ENSCATG00000035643) ENSCATG00000037270 ENSCATG00000039329 MAT2A (ENSCATG00000004424) #20 GGCX (ENSCATG00000035800) #21 VAMP8 (ENSCATG00000029537) #22 RNF181 (ENSCATG00000033596) #24 TMEM150A (ENSCATG00000037683) #25 C2orf68 (ENSCATG00000034407) #26 USP39 (ENSCATG00000024635) #27 SFTPB (ENSCATG00000029505) #28 GNLY (ENSCATG00000029047) ATOH8 (ENSCATG00000042555) #29 ST3GAL5 (ENSCATG00000039141) #30 POLR1A (ENSCATG00000029786) #31 PTCD3 (ENSCATG00000036541) #32 IMMT (ENSCATG00000038962) #33 MRPL35 (ENSCATG00000037137) #34 REEP1 (ENSCATG00000037544) #35 KDM3A (ENSCATG00000016041) #36 CHMP3 (ENSCATG00000035889) #37 Rhinopithecus ANCESTRAL SPECIES 280 ENSGT00910000147328 ENSGT00940000162822 ENSGT00950000183185.c.a.a.s #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901.t #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Black snub-nosed monkey MODERN SPECIES 1845 ENSRBIG00000042213 ENSRBIG00000030434 MAT2A (ENSRBIG00000040691) #20 GGCX (ENSRBIG00000027641) #21 VAMP8 (ENSRBIG00000032593) #22 VAMP5 (ENSRBIG00000040671) #23 RNF181 (ENSRBIG00000037300) #24 TMEM150A (ENSRBIG00000031271) #25 ENSRBIG00000028092 #26 USP39 (ENSRBIG00000030938) #27 ENSRBIG00000005054 SFTPB (ENSRBIG00000039671) #28 GNLY (ENSRBIG00000042514) ATOH8 (ENSRBIG00000021163) #29 ST3GAL5 (ENSRBIG00000044506) #30 POLR1A (ENSRBIG00000028335) #31 PTCD3 (ENSRBIG00000034809) #32 IMMT (ENSRBIG00000033551) #33 ENSRBIG00000043270 #34 REEP1 (ENSRBIG00000044318) #35 Golden snub-nosed monkey MODERN SPECIES 2316 MAT2A (ENSRROG00000039359) #20 GGCX (ENSRROG00000037659) #21 VAMP8 (ENSRROG00000038818) #22 VAMP5 (ENSRROG00000031654) #23 RNF181 (ENSRROG00000032844) #24 TMEM150A (ENSRROG00000036503) #25 ENSRROG00000029427 #26 USP39 (ENSRROG00000039568) #27 ENSRROG00000025648 SFTPB (ENSRROG00000027383) #28 GNLY (ENSRROG00000036075) ATOH8 (ENSRROG00000031621) #29 ST3GAL5 (ENSRROG00000031090) #30 POLR1A (ENSRROG00000031473) #31 PTCD3 (ENSRROG00000042210) #32 IMMT (ENSRROG00000023135) #33 MRPL35 (ENSRROG00000045417) #34 REEP1 (ENSRROG00000034941) #35 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00390000017613.q ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305.g ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135.a #36 Cebidae ANCESTRAL SPECIES 15 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305.g ENSGT00910000146589 ENSGT00910000147328 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552.e.a #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135.a #36 Marmoset MODERN SPECIES 5 ENSCJAG00000073910 SUCLG1 (ENSCJAG00000019805) DNAH6 (ENSCJAG00000019742) TRABD2A (ENSCJAG00000019738) TMSB10 (ENSCJAG00000086618) ENSCJAG00000082255 ENSCJAG00000072028 KCMF1 (ENSCJAG00000019735) TCF7L1 (ENSCJAG00000039504) RETSAT (ENSCJAG00000019726) ELMOD3 (ENSCJAG00000019718) CAPG (ENSCJAG00000041726) SH2D6 (ENSCJAG00000019695) MAT2A (ENSCJAG00000019681) #20 GGCX (ENSCJAG00000019657) #21 VAMP8 (ENSCJAG00000046213) #22 VAMP5 (ENSCJAG00000019651) #23 ENSCJAG00000019647 #24 TMEM150A (ENSCJAG00000019638) #25 C2orf68 (ENSCJAG00000019632) #26 USP39 (ENSCJAG00000019594) #27 SFTPB (ENSCJAG00000019581) #28 ENSCJAG00000071875 GNLY (ENSCJAG00000065652) ATOH8 (ENSCJAG00000019571) #29 ST3GAL5 (ENSCJAG00000019564) #30 POLR1A (ENSCJAG00000019547) #31 PTCD3 (ENSCJAG00000019523) #32 IMMT (ENSCJAG00000019480) #33 ENSCJAG00000019467 #34 REEP1 (ENSCJAG00000038576) #35 Cebidae_a ANCESTRAL SPECIES 91 ENSGT00940000156351 ENSGT00390000017955.c.q.b ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.r ENSGT00390000009488 ENSGT00940000159305.g ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552.e.a #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.t #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.g.a #34 ENSGT00940000159532 #35 ENSGT00940000160135.a #36 Bolivian squirrel monkey MODERN SPECIES 196 SUCLG1 (ENSSBOG00000025277) ENSSBOG00000024959 DNAH6 (ENSSBOG00000027150) ENSSBOG00000026272 TRABD2A (ENSSBOG00000021372) TMSB10 (ENSSBOG00000024439) KCMF1 (ENSSBOG00000028450) TCF7L1 (ENSSBOG00000024977) ENSSBOG00000029932 RETSAT (ENSSBOG00000027110) ELMOD3 (ENSSBOG00000026015) CAPG (ENSSBOG00000026620) ENSSBOG00000004955 ENSSBOG00000020245 #20 ENSSBOG00000024413 #21 VAMP8 (ENSSBOG00000025099) #22 VAMP5 (ENSSBOG00000023652) #23 RNF181 (ENSSBOG00000025972) #24 TMEM150A (ENSSBOG00000030498) #25 C2orf68 (ENSSBOG00000032799) #26 USP39 (ENSSBOG00000031347) #27 SFTPB (ENSSBOG00000033848) #28 Capuchin MODERN SPECIES 651 TCF7L1 (ENSCCAG00000015290) SNRPC (ENSCCAG00000028293) ENSCCAG00000021530 TGOLN2 (ENSCCAG00000026086) RETSAT (ENSCCAG00000033378) ELMOD3 (ENSCCAG00000019649) ENSCCAG00000029318 ENSCCAG00000028615 ENSCCAG00000021850 ENSCCAG00000011821 MAT2A (ENSCCAG00000020027) #20 GGCX (ENSCCAG00000029602) #21 VAMP8 (ENSCCAG00000027515) #22 VAMP5 (ENSCCAG00000036984) #23 ENSCCAG00000025694 #24 TMEM150A (ENSCCAG00000019691) #25 ENSCCAG00000025404 #26 USP39 (ENSCCAG00000033512) #27 SFTPB (ENSCCAG00000027112) #28 GNLY (ENSCCAG00000030545) ATOH8 (ENSCCAG00000023833) #29 Mas night monkey MODERN SPECIES 633 ENSANAG00000029217 #20 GGCX (ENSANAG00000024216) #21 VAMP8 (ENSANAG00000022750) #22 VAMP5 (ENSANAG00000027585) #23 ENSANAG00000035031 #24 TMEM150A (ENSANAG00000022848) #25 C2orf68 (ENSANAG00000011782) #26 ENSANAG00000037337 #27 SFTPB (ENSANAG00000028481) #28 ENSANAG00000036833 ATOH8 (ENSANAG00000037969) #29 ST3GAL5 (ENSANAG00000027759) #30 POLR1A (ENSANAG00000033927) #31 PTCD3 (ENSANAG00000032500) #32 ENSANAG00000015996 IMMT (ENSANAG00000020307) #33 MRPL35 (ENSANAG00000030616) #34 REEP1 (ENSANAG00000034595) #35 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Glires ANCESTRAL SPECIES 13 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Lagomorpha ANCESTRAL SPECIES 47 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Rabbit MODERN SPECIES 11 ENSOCUG00000032531 ENSOCUG00000031742 DNAH6 (ENSOCUG00000010057) TMSB10 (ENSOCUG00000017506) TRABD2A (ENSOCUG00000010075) ENSOCUG00000035044 ENSOCUG00000002533 TCF7L1 (ENSOCUG00000008749) ENSOCUG00000008764 RETSAT (ENSOCUG00000026865) ELMOD3 (ENSOCUG00000002332) CAPG (ENSOCUG00000002341) ENSOCUG00000039138 MAT2A (ENSOCUG00000002361) #20 GGCX (ENSOCUG00000002368) #21 VAMP8 (ENSOCUG00000002375) #22 VAMP5 (ENSOCUG00000025906) #23 ENSOCUG00000007951 #24 TMEM150A (ENSOCUG00000007956) #25 ENSOCUG00000010066 #26 USP39 (ENSOCUG00000010070) #27 ENSOCUG00000020733 #28 ATOH8 (ENSOCUG00000003528) #29 ST3GAL5 (ENSOCUG00000010126) #30 POLR1A (ENSOCUG00000010138) #31 ENSOCUG00000010161 #32 IMMT (ENSOCUG00000010178) #33 ENSOCUG00000010188 MRPL35 (ENSOCUG00000010193) #34 REEP1 (ENSOCUG00000010196) #35 ENSOCUG00000034180 Pika MODERN SPECIES 3193 MAT2A (ENSOPRG00000001898) #20 GGCX (ENSOPRG00000001919) #21 VAMP8 (ENSOPRG00000001958) #22 ENSOPRG00000001972 RNF181 (ENSOPRG00000001980) #24 TMEM150A (ENSOPRG00000001987) #25 C2orf68 (ENSOPRG00000002005) #26 USP39 (ENSOPRG00000002019) #27 SFTPB (ENSOPRG00000002060) #28 ST3GAL5 (ENSOPRG00000002085) #30 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000154447.y.a ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000154447.z ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Sciuridae ANCESTRAL SPECIES 53 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Marmotini ANCESTRAL SPECIES 86 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Alpin marmot MODERN SPECIES 118 ENSMMMG00000007007 ENSMMMG00000007012 ENSMMMG00000007026 RPIA (ENSMMMG00000007477) ENSMMMG00000007572 ENSMMMG00000007617 ENSMMMG00000007627 TCF7L1 (ENSMMMG00000007633) ENSMMMG00000007682 RETSAT (ENSMMMG00000007689) ENSMMMG00000007785 CAPG (ENSMMMG00000007822) ENSMMMG00000007857 MAT2A (ENSMMMG00000007871) #20 GGCX (ENSMMMG00000008142) #21 VAMP8 (ENSMMMG00000008162) #22 VAMP5 (ENSMMMG00000008168) #23 RNF181 (ENSMMMG00000008179) #24 TMEM150A (ENSMMMG00000008189) #25 USP39 (ENSMMMG00000008203) #27 ENSMMMG00000008853 #26 SFTPB (ENSMMMG00000008881) #28 ST3GAL5 (ENSMMMG00000008911) #30 POLR1A (ENSMMMG00000008920) #31 PTCD3 (ENSMMMG00000008977) #32 IMMT (ENSMMMG00000009011) #33 MRPL35 (ENSMMMG00000009181) #34 REEP1 (ENSMMMG00000009193) #35 KDM3A (ENSMMMG00000009242) #36 CHMP3 (ENSMMMG00000009359) #37 RNF103 (ENSMMMG00000009373) Marmotini_b ANCESTRAL SPECIES 128 ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000154129.m.r.b ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Squirrel MODERN SPECIES 312 RPIA (ENSSTOG00000023312) ENSSTOG00000034297 ENSSTOG00000031036 TCF7L1 (ENSSTOG00000021988) ENSSTOG00000020177 RETSAT (ENSSTOG00000026131) ELMOD3 (ENSSTOG00000009420) CAPG (ENSSTOG00000009431) ENSSTOG00000010788 MAT2A (ENSSTOG00000010796) #20 GGCX (ENSSTOG00000010797) #21 VAMP8 (ENSSTOG00000005962) #22 VAMP5 (ENSSTOG00000005966) #23 RNF181 (ENSSTOG00000005973) #24 TMEM150A (ENSSTOG00000023355) #25 C2orf68 (ENSSTOG00000032886) #26 USP39 (ENSSTOG00000015986) #27 SFTPB (ENSSTOG00000026197) #28 ENSSTOG00000033478 ATOH8 (ENSSTOG00000006538) #29 ST3GAL5 (ENSSTOG00000024816) #30 ENSSTOG00000012609 POLR1A (ENSSTOG00000012580) #31 PTCD3 (ENSSTOG00000012611) #32 IMMT (ENSSTOG00000012624) #33 MRPL35 (ENSSTOG00000030233) #34 REEP1 (ENSSTOG00000025141) #35 Arctic ground squirrel MODERN SPECIES 609 IGKC (ENSUPAG00010018047) RPIA (ENSUPAG00010018051) ENSUPAG00010018060 TCF7L1 (ENSUPAG00010018088) ENSUPAG00010018102 RETSAT (ENSUPAG00010018105) ELMOD3 (ENSUPAG00010018158) CAPG (ENSUPAG00010018187) SH2D6 (ENSUPAG00010018214) MAT2A (ENSUPAG00010000075) #20 GGCX (ENSUPAG00010000144) #21 VAMP8 (ENSUPAG00010000178) #22 ENSUPAG00010000192 #23 TMEM150A (ENSUPAG00010000226) #25 RNF181 (ENSUPAG00010000242) #24 ENSUPAG00010000260 #26 USP39 (ENSUPAG00010000286) #27 SFTPB (ENSUPAG00010000319) #28 ENSUPAG00010000360 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005019338 ENSSVLG00005019271 ENSSVLG00005018002 ENSSVLG00005017863 ENSSVLG00005017786 TCF7L1 (ENSSVLG00005017741) ENSSVLG00005017693 RETSAT (ENSSVLG00005017559) ELMOD3 (ENSSVLG00005017414) CAPG (ENSSVLG00005017210) ENSSVLG00005017177 SH2D6 (ENSSVLG00005016979) MAT2A (ENSSVLG00005016926) #20 ENSSVLG00005016868 GGCX (ENSSVLG00005016698) #21 VAMP8 (ENSSVLG00005016627) #22 VAMP5 (ENSSVLG00005016585) #23 RNF181 (ENSSVLG00005016555) #24 TMEM150A (ENSSVLG00005016477) #25 ENSSVLG00005016431 #26 USP39 (ENSSVLG00005016257) #27 SFTPB (ENSSVLG00005015980) #28 ATOH8 (ENSSVLG00005015922) #29 ST3GAL5 (ENSSVLG00005015795) #30 POLR1A (ENSSVLG00005015696) #31 PTCD3 (ENSSVLG00005016912) #32 IMMT (ENSSVLG00005016785) #33 MRPL35 (ENSSVLG00005016713) #34 REEP1 (ENSSVLG00005016418) #35 KDM3A (ENSSVLG00005016348) #36 CHMP3 (ENSSVLG00005016280) #37 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000154447.z.e.a ENSGT00940000154447.z.f ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n ENSGT00940000157038 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Long-tailed chinchilla MODERN SPECIES 131 ENSCLAG00000005858 LRRTM1 (ENSCLAG00000005364) CTNNA2 (ENSCLAG00000013755) ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) DNAH6 (ENSCLAG00000006035) TMSB10 (ENSCLAG00000010365) KCMF1 (ENSCLAG00000009986) TCF7L1 (ENSCLAG00000007414) RETSAT (ENSCLAG00000008939) ELMOD3 (ENSCLAG00000009003) CAPG (ENSCLAG00000004481) ENSCLAG00000006141 MAT2A (ENSCLAG00000007205) #20 GGCX (ENSCLAG00000005838) #21 VAMP8 (ENSCLAG00000008880) #22 VAMP5 (ENSCLAG00000009915) #23 RNF181 (ENSCLAG00000006082) #24 TMEM150A (ENSCLAG00000005500) #25 C2orf68 (ENSCLAG00000009438) #26 USP39 (ENSCLAG00000006866) #27 SFTPB (ENSCLAG00000006471) #28 ATOH8 (ENSCLAG00000006142) #29 ST3GAL5 (ENSCLAG00000006950) #30 POLR1A (ENSCLAG00000005187) #31 PTCD3 (ENSCLAG00000007992) #32 IMMT (ENSCLAG00000005278) #33 MRPL35 (ENSCLAG00000004489) #34 REEP1 (ENSCLAG00000012499) #35 KDM3A (ENSCLAG00000011990) #36 CHMP3 (ENSCLAG00000009289) #37 Degu MODERN SPECIES 203 ENSODEG00000002222 ENSODEG00000002212 SUCLG1 (ENSODEG00000002195) DNAH6 (ENSODEG00000003756) ENSODEG00000003596 ENSODEG00000003586 TCF7L1 (ENSODEG00000003559) RETSAT (ENSODEG00000003469) ELMOD3 (ENSODEG00000003393) CAPG (ENSODEG00000003321) ENSODEG00000018929 SH2D6 (ENSODEG00000003239) ENSODEG00000003186 #20 GGCX (ENSODEG00000003141) #21 VAMP8 (ENSODEG00000003107) #22 VAMP5 (ENSODEG00000003093) #23 RNF181 (ENSODEG00000003046) #24 TMEM150A (ENSODEG00000003753) #25 C2orf68 (ENSODEG00000003734) #26 USP39 (ENSODEG00000003717) #27 SFTPB (ENSODEG00000003695) #28 ATOH8 (ENSODEG00000003670) #29 ST3GAL5 (ENSODEG00000003647) #30 ENSODEG00000018941 POLR1A (ENSODEG00000003542) #31 PTCD3 (ENSODEG00000003461) #32 IMMT (ENSODEG00000003274) #33 MRPL35 (ENSODEG00000003180) #34 REEP1 (ENSODEG00000003133) #35 KDM3A (ENSODEG00000003061) #36 Guinea pig MODERN SPECIES 37 ENSCPOG00000004885 ENSCPOG00000032214 LRRTM1 (ENSCPOG00000001371) CTNNA2 (ENSCPOG00000023564) SUCLG1 (ENSCPOG00000003017) DNAH6 (ENSCPOG00000015041) KCMF1 (ENSCPOG00000023050) TCF7L1 (ENSCPOG00000014492) ENSCPOG00000037555 RETSAT (ENSCPOG00000022640) ELMOD3 (ENSCPOG00000007973) CAPG (ENSCPOG00000007978) ENSCPOG00000012229 MAT2A (ENSCPOG00000001533) #20 GGCX (ENSCPOG00000001534) #21 VAMP8 (ENSCPOG00000001409) #22 VAMP5 (ENSCPOG00000021802) #23 RNF181 (ENSCPOG00000001938) #24 TMEM150A (ENSCPOG00000025516) #25 C2orf68 (ENSCPOG00000009311) #26 USP39 (ENSCPOG00000009315) #27 SFTPB (ENSCPOG00000035291) #28 ATOH8 (ENSCPOG00000006364) #29 ST3GAL5 (ENSCPOG00000000993) #30 POLR1A (ENSCPOG00000012350) #31 PTCD3 (ENSCPOG00000012371) #32 IMMT (ENSCPOG00000012379) #33 MRPL35 (ENSCPOG00000012387) #34 REEP1 (ENSCPOG00000012389) #35 KDM3A (ENSCPOG00000023055) #36 CHMP3 (ENSCPOG00000001723) #37 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000020983 SUCLG1 (ENSHGLG00000047475) ENSHGLG00000016621 ENSHGLG00000039609 ENSHGLG00000036565 ENSHGLG00000049290 TCF7L1 (ENSHGLG00000044140) ENSHGLG00000007230 RETSAT (ENSHGLG00000009788) ENSHGLG00000005816 ENSHGLG00000043435 CAPG (ENSHGLG00000004995) SH2D6 (ENSHGLG00000016223) MAT2A (ENSHGLG00000018376) #20 GGCX (ENSHGLG00000013929) #21 VAMP8 (ENSHGLG00000012997) #22 ENSHGLG00000012613 #23 RNF181 (ENSHGLG00000045564) #24 TMEM150A (ENSHGLG00000010994) #25 C2orf68 (ENSHGLG00000036696) #26 USP39 (ENSHGLG00000015846) #27 SFTPB (ENSHGLG00000016430) #28 ENSHGLG00000033431 ATOH8 (ENSHGLG00000013394) #29 ST3GAL5 (ENSHGLG00000015817) #30 ENSHGLG00000050264 ENSHGLG00000006334 #31 PTCD3 (ENSHGLG00000007937) #32 IMMT (ENSHGLG00000004647) #33 ENSHGLG00000049882 MRPL35 (ENSHGLG00000042289) #34 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000162300 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Myomorpha ANCESTRAL SPECIES 37 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Muroidea ANCESTRAL SPECIES 38 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1096 ENSNGAG00000009815 Jkampl (ENSNGAG00000013694) ENSNGAG00000023092 Suclg1 (ENSNGAG00000015283) ENSNGAG00000013792 Dnah6 (ENSNGAG00000013760) Tmsb10b (ENSNGAG00000016585) ENSNGAG00000017279 Tcf7l1 (ENSNGAG00000020122) Retsat (ENSNGAG00000007772) Elmod3 (ENSNGAG00000017699) Capg (ENSNGAG00000019315) Sh2d6 (ENSNGAG00000000856) Mat2a (ENSNGAG00000014289) #20 Ggcx (ENSNGAG00000000695) #21 ENSNGAG00000014911 #22 Vamp5 (ENSNGAG00000022303) #23 ENSNGAG00000010364 #24 Tmem150a (ENSNGAG00000000493) #25 0610030E20Rik (ENSNGAG00000012174) #26 Usp39 (ENSNGAG00000018760) #27 Sftpb (ENSNGAG00000020909) #28 Atoh8 (ENSNGAG00000017424) #29 ENSNGAG00000017959 St3gal5 (ENSNGAG00000020246) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 1224 Stab2 (ENSNGAG00000001493) Nt5dc3 (ENSNGAG00000018361) Hsp90b1 (ENSNGAG00000014447) ENSNGAG00000013621 Tdg (ENSNGAG00000000667) Glt8d2 (ENSNGAG00000002040) Hcfc2 (ENSNGAG00000019076) Nfyb (ENSNGAG00000017224) Eid3 (ENSNGAG00000019100) ENSNGAG00000019222 Chst11 (ENSNGAG00000017327) ENSNGAG00000015399 #22 Slc41a2 (ENSNGAG00000013889) Nopchap1 (ENSNGAG00000012316) Aldh1l2 (ENSNGAG00000020174) ENSNGAG00000019266 Washc4 (ENSNGAG00000015936) ENSNGAG00000014686 1500009L16Rik (ENSNGAG00000013967) Nuak1 (ENSNGAG00000011987) Ckap4 (ENSNGAG00000015103) Tcp11l2 (ENSNGAG00000012830) Polr3b (ENSNGAG00000011308) Rfx4 (ENSNGAG00000000351) Ric8b (ENSNGAG00000018867) Tmem263 (ENSNGAG00000015885) Mterf2 (ENSNGAG00000000529) Muroidea_A ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Cricetidae ANCESTRAL SPECIES 3 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000154447.y.a.b ENSGT01030000234543.A.a ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Chinese hamster chok1gshd MODERN SPECIES 242 Ctnna2 (ENSCGRG00001000241) Jkampl (ENSCGRG00001016234) Suclg1 (ENSCGRG00001007965) Dnah6 (ENSCGRG00001001087) ENSCGRG00001017576 Tmsb10b (ENSCGRG00001017927) Kcmf1 (ENSCGRG00001018737) Tcf7l1 (ENSCGRG00001021396) ENSCGRG00001022789 Retsat (ENSCGRG00001023894) Elmod3 (ENSCGRG00001000477) Capg (ENSCGRG00001001836) Sh2d6 (ENSCGRG00001007691) Mat2a (ENSCGRG00001010053) #20 Ggcx (ENSCGRG00001012860) #21 Vamp8 (ENSCGRG00001014727) #22 Vamp5 (ENSCGRG00001015261) #23 Tmem150a (ENSCGRG00001016577) #25 Rnf181 (ENSCGRG00001017863) 0610030E20Rik (ENSCGRG00001019313) #26 Usp39 (ENSCGRG00001019807) #27 Sftpb (ENSCGRG00001020533) #28 Atoh8 (ENSCGRG00001000824) #29 St3gal5 (ENSCGRG00001002527) #30 ENSCGRG00001015637 Polr1a (ENSCGRG00001006651) #31 Ptcd3 (ENSCGRG00001010361) #32 Immt (ENSCGRG00001013917) #33 Mrpl35 (ENSCGRG00001016701) #34 Reep1 (ENSCGRG00001018917) #35 Kdm3a (ENSCGRG00001020421) #36 Golden Hamster MODERN SPECIES 675 Sh2d6 (ENSMAUG00000000137) Mat2a (ENSMAUG00000010463) #20 Ggcx (ENSMAUG00000014325) #21 Vamp8 (ENSMAUG00000018469) #22 Vamp5 (ENSMAUG00000010363) #23 ENSMAUG00000015068 #24 Tmem150a (ENSMAUG00000012394) #25 0610030E20Rik (ENSMAUG00000011957) #26 Usp39 (ENSMAUG00000009400) #27 Sftpb (ENSMAUG00000008956) #28 Atoh8 (ENSMAUG00000008236) #29 St3gal5 (ENSMAUG00000012326) #30 Polr1a (ENSMAUG00000008497) #31 Ptcd3 (ENSMAUG00000000145) #32 Immt (ENSMAUG00000011453) #33 Mrpl35 (ENSMAUG00000009361) #34 Reep1 (ENSMAUG00000013117) #35 Kdm3a (ENSMAUG00000006230) #36 Chmp3 (ENSMAUG00000009081) #37 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909.g #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Prairie vole MODERN SPECIES 83 ENSMOCG00000004435 Suclg1 (ENSMOCG00000021421) Dnah6 (ENSMOCG00000002417) ENSMOCG00000012602 Kcmf1 (ENSMOCG00000003279) Tcf7l1 (ENSMOCG00000012953) ENSMOCG00000000091 Retsat (ENSMOCG00000021447) ENSMOCG00000000675 ENSMOCG00000002524 Elmod3 (ENSMOCG00000015870) Capg (ENSMOCG00000005806) Sh2d6 (ENSMOCG00000015508) ENSMOCG00000011611 #20 Ggcx (ENSMOCG00000017281) #21 Vamp8 (ENSMOCG00000004037) #22 Vamp5 (ENSMOCG00000014948) #23 ENSMOCG00000020563 #24 Tmem150a (ENSMOCG00000012440) #25 0610030E20Rik (ENSMOCG00000022948) #26 Usp39 (ENSMOCG00000014162) #27 Sftpb (ENSMOCG00000003084) #28 Atoh8 (ENSMOCG00000019812) #29 St3gal5 (ENSMOCG00000005961) #30 Polr1a (ENSMOCG00000000122) #31 Ptcd3 (ENSMOCG00000019181) #32 Immt (ENSMOCG00000000827) #33 Mrpl35 (ENSMOCG00000008652) #34 Reep1 (ENSMOCG00000013750) #35 Kdm3a (ENSMOCG00000011851) #36 Chmp3 (ENSMOCG00000022847) #37 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000029513 Jkampl (ENSPEMG00000024694) Suclg1 (ENSPEMG00000010810) Dnah6 (ENSPEMG00000023939) ENSPEMG00000030958 ENSPEMG00000026592 Kcmf1 (ENSPEMG00000029405) Tcf7l1 (ENSPEMG00000004714) Tgoln1 (ENSPEMG00000007145) Retsat (ENSPEMG00000011191) Elmod3 (ENSPEMG00000010510) Capg (ENSPEMG00000018215) Sh2d6 (ENSPEMG00000016371) Mat2a (ENSPEMG00000015257) #20 Ggcx (ENSPEMG00000013327) #21 Vamp8 (ENSPEMG00000029313) #22 Vamp5 (ENSPEMG00000027040) #23 ENSPEMG00000010283 #24 Tmem150a (ENSPEMG00000018551) #25 0610030E20Rik (ENSPEMG00000025650) #26 Usp39 (ENSPEMG00000030030) #27 Sftpb (ENSPEMG00000013792) #28 Atoh8 (ENSPEMG00000014683) #29 St3gal5 (ENSPEMG00000022543) #30 ENSPEMG00000023889 Polr1a (ENSPEMG00000022224) #31 Ptcd3 (ENSPEMG00000024106) #32 Immt (ENSPEMG00000009199) #33 Mrpl35 (ENSPEMG00000021175) #34 Reep1 (ENSPEMG00000021271) #35 Kdm3a (ENSPEMG00000020813) #36 Murinae ANCESTRAL SPECIES 4 ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus ANCESTRAL SPECIES 12 ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mus_B ANCESTRAL SPECIES 15 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Mouse MODERN SPECIES 15 Ctnna2 (ENSMUSG00000063063) Gm9008 (ENSMUSG00000072476) Jkampl (ENSMUSG00000056197) Suclg1 (ENSMUSG00000052738) Dnah6 (ENSMUSG00000052861) Tmsb10 (ENSMUSG00000079523) Kcmf1 (ENSMUSG00000055239) Tcf7l1 (ENSMUSG00000055799) Tgoln1 (ENSMUSG00000056429) Retsat (ENSMUSG00000056666) Elmod3 (ENSMUSG00000056698) Capg (ENSMUSG00000056737) Sh2d6 (ENSMUSG00000052631) Mat2a (ENSMUSG00000053907) #20 Ggcx (ENSMUSG00000053460) #21 Vamp8 (ENSMUSG00000050732) #22 Vamp5 (ENSMUSG00000073002) #23 Rnf181 (ENSMUSG00000055850) Tmem150a (ENSMUSG00000055912) #25 0610030E20Rik (ENSMUSG00000058706) #26 Usp39 (ENSMUSG00000056305) #27 Sftpb (ENSMUSG00000056370) #28 Atoh8 (ENSMUSG00000037621) #29 St3gal5 (ENSMUSG00000056091) #30 Polr1a (ENSMUSG00000049553) #31 Ptcd3 (ENSMUSG00000063884) #32 Immt (ENSMUSG00000052337) #33 Mrpl35 (ENSMUSG00000052962) #34 Reep1 (ENSMUSG00000052852) #35 Kdm3a (ENSMUSG00000053470) #36 Chmp3 (ENSMUSG00000053119) #37 Mus_C ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a.g #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 spretus MODERN SPECIES 15 Lrrtm1 (MGP_SPRETEiJ_G0029523) Ctnna2 (MGP_SPRETEiJ_G0029522) Jkampl (MGP_SPRETEiJ_G0029521) Suclg1 (MGP_SPRETEiJ_G0029520) Dnah6 (MGP_SPRETEiJ_G0029519) MGP_SPRETEiJ_G0029518 Kcmf1 (MGP_SPRETEiJ_G0029517) Tcf7l1 (MGP_SPRETEiJ_G0029516) Tgoln1 (MGP_SPRETEiJ_G0029515) Retsat (MGP_SPRETEiJ_G0029514) Elmod3 (MGP_SPRETEiJ_G0029513) Capg (MGP_SPRETEiJ_G0029512) MGP_SPRETEiJ_G0029511 Mat2a (MGP_SPRETEiJ_G0029510) #20 Ggcx (MGP_SPRETEiJ_G0029509) #21 Vamp8 (MGP_SPRETEiJ_G0029508) #22 Vamp5 (MGP_SPRETEiJ_G0029507) #23 Rnf181 (MGP_SPRETEiJ_G0029506) Tmem150a (MGP_SPRETEiJ_G0029505) #25 0610030E20Rik (MGP_SPRETEiJ_G0029504) #26 Usp39 (MGP_SPRETEiJ_G0029503) #27 Sftpb (MGP_SPRETEiJ_G0029502) #28 Atoh8 (MGP_SPRETEiJ_G0029501) #29 St3gal5 (MGP_SPRETEiJ_G0029500) #30 Polr1a (MGP_SPRETEiJ_G0029499) #31 Ptcd3 (MGP_SPRETEiJ_G0029498) #32 Immt (MGP_SPRETEiJ_G0029497) #33 Mrpl35 (MGP_SPRETEiJ_G0029496) #34 MGP_SPRETEiJ_G0029495 #35 Kdm3a (MGP_SPRETEiJ_G0029494) #36 Chmp3 (MGP_SPRETEiJ_G0029493) #37 Steppe mouse MODERN SPECIES 3287 ENSMSIG00000006995 Suclg1 (ENSMSIG00000007008) ENSMSIG00000007054 ENSMSIG00000007062 Dnah6 (ENSMSIG00000007091) Tmsb10b (ENSMSIG00000007285) Kcmf1 (ENSMSIG00000007304) Tcf7l1 (ENSMSIG00000007365) ENSMSIG00000007493 Retsat (ENSMSIG00000007552) Elmod3 (ENSMSIG00000007675) Capg (ENSMSIG00000007704) Sh2d6 (ENSMSIG00000007788) Mat2a (ENSMSIG00000007887) #20 Ggcx (ENSMSIG00000007972) #21 Vamp8 (ENSMSIG00000008076) #22 ENSMSIG00000008096 #23 ENSMSIG00000008118 #24 Tmem150a (ENSMSIG00000008166) #25 0610030E20Rik (ENSMSIG00000008200) #26 Usp39 (ENSMSIG00000008226) #27 Sftpb (ENSMSIG00000008238) #28 Atoh8 (ENSMSIG00000008291) #29 St3gal5 (ENSMSIG00000008306) #30 ENSMSIG00000008349 Polr1a (ENSMSIG00000008358) #31 Ptcd3 (ENSMSIG00000008420) #32 Immt (ENSMSIG00000008522) #33 Mrpl35 (ENSMSIG00000009352) #34 Reep1 (ENSMSIG00000009384) #35 Kdm3a (ENSMSIG00000009485) #36 Ryukyu mouse MODERN SPECIES 15 Lrrtm1 (MGP_CAROLIEiJ_G0028518) Ctnna2 (MGP_CAROLIEiJ_G0028517) Jkampl (MGP_CAROLIEiJ_G0028516) Suclg1 (MGP_CAROLIEiJ_G0028515) Dnah6 (MGP_CAROLIEiJ_G0028514) Tmsb10 (MGP_CAROLIEiJ_G0028513) Kcmf1 (MGP_CAROLIEiJ_G0028512) Tcf7l1 (MGP_CAROLIEiJ_G0028511) Tgoln1 (MGP_CAROLIEiJ_G0028510) Retsat (MGP_CAROLIEiJ_G0028509) Elmod3 (MGP_CAROLIEiJ_G0028508) Capg (MGP_CAROLIEiJ_G0028507) Sh2d6 (MGP_CAROLIEiJ_G0028506) Mat2a (MGP_CAROLIEiJ_G0028505) #20 Ggcx (MGP_CAROLIEiJ_G0028504) #21 Vamp8 (MGP_CAROLIEiJ_G0028503) #22 Vamp5 (MGP_CAROLIEiJ_G0028502) #23 MGP_CAROLIEiJ_G0028501 #24 Tmem150a (MGP_CAROLIEiJ_G0028500) #25 0610030E20Rik (MGP_CAROLIEiJ_G0028499) #26 Usp39 (MGP_CAROLIEiJ_G0028498) #27 Sftpb (MGP_CAROLIEiJ_G0028497) #28 Atoh8 (MGP_CAROLIEiJ_G0028496) #29 St3gal5 (MGP_CAROLIEiJ_G0028495) #30 Polr1a (MGP_CAROLIEiJ_G0028494) #31 Ptcd3 (MGP_CAROLIEiJ_G0028493) #32 Immt (MGP_CAROLIEiJ_G0028492) #33 Mrpl35 (MGP_CAROLIEiJ_G0028491) #34 MGP_CAROLIEiJ_G0028490 #35 Kdm3a (MGP_CAROLIEiJ_G0028489) #36 Chmp3 (MGP_CAROLIEiJ_G0028488) #37 Shrew mouse MODERN SPECIES 11 Lrrtm1 (MGP_PahariEiJ_G0022253) Ctnna2 (MGP_PahariEiJ_G0022252) Jkampl (MGP_PahariEiJ_G0022251) Suclg1 (MGP_PahariEiJ_G0022250) Dnah6 (MGP_PahariEiJ_G0022249) Tmsb10 (MGP_PahariEiJ_G0022248) Kcmf1 (MGP_PahariEiJ_G0022247) Tcf7l1 (MGP_PahariEiJ_G0022246) MGP_PahariEiJ_G0022245 Retsat (MGP_PahariEiJ_G0022244) Elmod3 (MGP_PahariEiJ_G0022243) Capg (MGP_PahariEiJ_G0022242) Sh2d6 (MGP_PahariEiJ_G0022241) Mat2a (MGP_PahariEiJ_G0022240) #20 Ggcx (MGP_PahariEiJ_G0022239) #21 Vamp8 (MGP_PahariEiJ_G0022238) #22 Rnf181 (MGP_PahariEiJ_G0022237) Tmem150a (MGP_PahariEiJ_G0022236) #25 0610030E20Rik (MGP_PahariEiJ_G0022235) #26 Usp39 (MGP_PahariEiJ_G0022234) #27 Sftpb (MGP_PahariEiJ_G0022233) #28 Atoh8 (MGP_PahariEiJ_G0022232) #29 St3gal5 (MGP_PahariEiJ_G0022231) #30 Polr1a (MGP_PahariEiJ_G0022230) #31 Ptcd3 (MGP_PahariEiJ_G0022229) #32 Immt (MGP_PahariEiJ_G0022228) #33 Mrpl35 (MGP_PahariEiJ_G0022227) #34 MGP_PahariEiJ_G0022226 #35 Kdm3a (MGP_PahariEiJ_G0022225) #36 Chmp3 (MGP_PahariEiJ_G0022224) #37 Rnf103 (MGP_PahariEiJ_G0022223) Rat MODERN SPECIES 14 ENSRNOG00000071146 Ptbp1-ps3 (ENSRNOG00000070516) Jkampl (ENSRNOG00000024604) Suclg1 (ENSRNOG00000005587) Dnah6 (ENSRNOG00000015581) Tmsb10 (ENSRNOG00000064090) Kcmf1 (ENSRNOG00000015097) Tcf7l1 (ENSRNOG00000014753) Tgoln2 (ENSRNOG00000014617) Retsat (ENSRNOG00000014090) Elmod3 (ENSRNOG00000038102) Capg (ENSRNOG00000013668) Sh2d6 (ENSRNOG00000013605) Mat2a (ENSRNOG00000013520) #20 Ggcx (ENSRNOG00000012975) #21 Vamp8 (ENSRNOG00000012748) #22 Vamp5 (ENSRNOG00000012659) #23 Rnf181 (ENSRNOG00000012035) #24 Tmem150a (ENSRNOG00000061100) #25 LOC691113 (ENSRNOG00000011713) #26 Usp39 (ENSRNOG00000010930) #27 Sftpb (ENSRNOG00000010761) #28 Atoh8 (ENSRNOG00000010716) #29 ENSRNOG00000065207 St3gal5 (ENSRNOG00000010284) #30 Polr1a (ENSRNOG00000009545) #31 Ptcd3 (ENSRNOG00000009484) #32 Immt (ENSRNOG00000009097) #33 Mrpl35 (ENSRNOG00000008546) #34 Reep1 (ENSRNOG00000008481) #35 Kdm3a (ENSRNOG00000007814) #36 Lesser Egyptian jerboa MODERN SPECIES 77 Suclg1 (ENSJJAG00000023782) ENSJJAG00000020479 Dnah6 (ENSJJAG00000013999) ENSJJAG00000009987 ENSJJAG00000006387 Kcmf1 (ENSJJAG00000020771) ENSJJAG00000010136 Tcf7l1 (ENSJJAG00000023485) ENSJJAG00000022764 Retsat (ENSJJAG00000018206) Elmod3 (ENSJJAG00000015903) Capg (ENSJJAG00000011988) Sh2d6 (ENSJJAG00000011036) Mat2a (ENSJJAG00000019942) #20 Ggcx (ENSJJAG00000013219) #21 Vamp8 (ENSJJAG00000023575) #22 Vamp5 (ENSJJAG00000021713) #23 ENSJJAG00000012435 #24 Tmem150a (ENSJJAG00000015485) #25 Sftpb (ENSJJAG00000020339) #28 Atoh8 (ENSJJAG00000003684) #29 St3gal5 (ENSJJAG00000012802) #30 Polr1a (ENSJJAG00000013113) #31 ENSJJAG00000012431 #32 Immt (ENSJJAG00000015348) #33 Reep1 (ENSJJAG00000021695) #35 Kdm3a (ENSJJAG00000022464) #36 ENSJJAG00000016934 #37 ENSJJAG00000004517 Rnf103 (ENSJJAG00000013104) ENSJJAG00000002281 Kangaroo rat MODERN SPECIES 528 Suclg1 (ENSDORG00000010991) Dnah6 (ENSDORG00000000400) Tmsb10b (ENSDORG00000025129) Kcmf1 (ENSDORG00000029229) Tcf7l1 (ENSDORG00000013753) Retsat (ENSDORG00000009720) Elmod3 (ENSDORG00000009721) Capg (ENSDORG00000009722) Sh2d6 (ENSDORG00000013882) Mat2a (ENSDORG00000011312) #20 Ggcx (ENSDORG00000006726) #21 Vamp8 (ENSDORG00000010738) #22 Vamp5 (ENSDORG00000027327) #23 ENSDORG00000010740 #24 Tmem150a (ENSDORG00000010742) #25 0610030E20Rik (ENSDORG00000030143) #26 Usp39 (ENSDORG00000010746) #27 Sftpb (ENSDORG00000010751) #28 Atoh8 (ENSDORG00000028892) #29 St3gal5 (ENSDORG00000008296) #30 Polr1a (ENSDORG00000008298) #31 Ptcd3 (ENSDORG00000008305) #32 ENSDORG00000001073 #33 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000160325.b #22 Common shrew MODERN SPECIES 1408 VAMP8 (ENSSARG00000001240) #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Suina ANCESTRAL SPECIES 13 ENSGT00940000154909 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Chacoan peccary MODERN SPECIES 778 ENSCWAG00000019058 CTNNA2 (ENSCWAG00000019150) LRRTM1 (ENSCWAG00000019999) SUCLG1 (ENSCWAG00000020040) DNAH6 (ENSCWAG00000020066) TMSB10 (ENSCWAG00000020204) KCMF1 (ENSCWAG00000003682) TCF7L1 (ENSCWAG00000003731) ENSCWAG00000003769 RETSAT (ENSCWAG00000003794) ELMOD3 (ENSCWAG00000003833) CAPG (ENSCWAG00000003883) ENSCWAG00000003929 MAT2A (ENSCWAG00000003951) #20 GGCX (ENSCWAG00000004008) #21 VAMP8 (ENSCWAG00000004178) #22 VAMP5 (ENSCWAG00000004199) #23 RNF181 (ENSCWAG00000004223) #24 TMEM150A (ENSCWAG00000004246) #25 C2orf68 (ENSCWAG00000004281) #26 USP39 (ENSCWAG00000004340) #27 SFTPB (ENSCWAG00000004607) #28 ENSCWAG00000004815 ATOH8 (ENSCWAG00000004847) #29 ST3GAL5 (ENSCWAG00000004882) #30 POLR1A (ENSCWAG00000005022) #31 PTCD3 (ENSCWAG00000005070) #32 IMMT (ENSCWAG00000005105) #33 MRPL35 (ENSCWAG00000005221) #34 REEP1 (ENSCWAG00000005308) #35 KDM3A (ENSCWAG00000005579) #36 Pig MODERN SPECIES 11 LRRTM1 (ENSSSCG00000023859) ENSSSCG00000008250 SUCLG1 (ENSSSCG00000008247) DNAH6 (ENSSSCG00000045529) TMSB10 (ENSSSCG00000008245) KCMF1 (ENSSSCG00000008242) ENSSSCG00000051279 ENSSSCG00000008241 ENSSSCG00000050627 RETSAT (ENSSSCG00000008237) ELMOD3 (ENSSSCG00000008238) CAPG (ENSSSCG00000008239) ENSSSCG00000008240 MAT2A (ENSSSCG00000022300) #20 GGCX (ENSSSCG00000027381) #21 VAMP8 (ENSSSCG00000062938) #22 VAMP5 (ENSSSCG00000033135) #23 RNF181 (ENSSSCG00000008232) #24 TMEM150A (ENSSSCG00000008233) #25 C2orf68 (ENSSSCG00000028287) #26 USP39 (ENSSSCG00000030435) #27 SFTPB (ENSSSCG00000008229) #28 GNLY (ENSSSCG00000008228) ATOH8 (ENSSSCG00000008230) #29 ST3GAL5 (ENSSSCG00000008227) #30 ENSSSCG00000058352 POLR1A (ENSSSCG00000008226) #31 PTCD3 (ENSSSCG00000008225) #32 IMMT (ENSSSCG00000024564) #33 MRPL35 (ENSSSCG00000021746) #34 REEP1 (ENSSSCG00000023710) #35 Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Camelidae ANCESTRAL SPECIES 89 ENSGT00940000154909 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Arabian camel MODERN SPECIES 20 ENSCDRG00005017522 LRRTM1 (ENSCDRG00005017487) ENSCDRG00005017214 SUCLG1 (ENSCDRG00005017092) DNAH6 (ENSCDRG00005017032) ENSCDRG00005016982 KCMF1 (ENSCDRG00005016907) TCF7L1 (ENSCDRG00005016823) ENSCDRG00005016793 RETSAT (ENSCDRG00005016753) ELMOD3 (ENSCDRG00005016681) CAPG (ENSCDRG00005016605) SH2D6 (ENSCDRG00005016477) MAT2A (ENSCDRG00005016380) #20 GGCX (ENSCDRG00005016233) #21 VAMP8 (ENSCDRG00005016194) #22 VAMP5 (ENSCDRG00005016173) #23 RNF181 (ENSCDRG00005016091) #24 TMEM150A (ENSCDRG00005016019) #25 C2orf68 (ENSCDRG00005015950) #26 USP39 (ENSCDRG00005015614) #27 SFTPB (ENSCDRG00005015553) #28 ENSCDRG00005015532 ATOH8 (ENSCDRG00005015499) #29 ST3GAL5 (ENSCDRG00005015428) #30 POLR1A (ENSCDRG00005015250) #31 PTCD3 (ENSCDRG00005015005) #32 IMMT (ENSCDRG00005014543) #33 MRPL35 (ENSCDRG00005014433) #34 REEP1 (ENSCDRG00005014142) #35 KDM3A (ENSCDRG00005013998) #36 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Pecora ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Percora_a ANCESTRAL SPECIES 13 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Caprinae ANCESTRAL SPECIES 9 ENSGT00940000154447.j.a ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 19 CTNNA2 (ENSOARG00020002405) LRRTM1 (ENSOARG00020002530) ENSOARG00020002555 ENSOARG00020002597 SUCLG1 (ENSOARG00020002604) DNAH6 (ENSOARG00020002647) TMSB10 (ENSOARG00020002756) KCMF1 (ENSOARG00020002774) TCF7L1 (ENSOARG00020002813) ENSOARG00020002845 GGCX (ENSOARG00020002878) #21 ELMOD3 (ENSOARG00020002916) CAPG (ENSOARG00020002936) SH2D6 (ENSOARG00020002951) MAT2A (ENSOARG00020002979) #20 ENSOARG00020002994 #22 VAMP5 (ENSOARG00020003011) #23 RNF181 (ENSOARG00020003033) #24 TMEM150A (ENSOARG00020003074) #25 C2orf68 (ENSOARG00020003094) #26 USP39 (ENSOARG00020003123) #27 SFTPB (ENSOARG00020003261) #28 ENSOARG00020003392 ENSOARG00020003492 ATOH8 (ENSOARG00020003526) #29 ST3GAL5 (ENSOARG00020003555) #30 POLR1A (ENSOARG00020003653) #31 PTCD3 (ENSOARG00020000168) #32 IMMT (ENSOARG00020000246) #33 MRPL35 (ENSOARG00020000311) #34 REEP1 (ENSOARG00020000378) #35 Rambouillet Sheep MODERN SPECIES 12 ENSOARG00020008159 ENSOARG00020008182 ENSOARG00020008200 ENSOARG00020008220 ENSOARG00020008257 ENSOARG00020008272 ENSOARG00020008289 ENSOARG00020008313 ENSOARG00020008332 ENSOARG00020008348 ENSOARG00020008387 ENSOARG00020008400 ENSOARG00020008443 ABT1 (ENSOARG00020008475) HMGN4 (ENSOARG00020008517) ENSOARG00020008536 #22 BTN1A1 (ENSOARG00020008558) BTN2A1 (ENSOARG00020008605) ENSOARG00020008941 ENSOARG00020008979 ENSOARG00020008987 ENSOARG00020009000 ENSOARG00020009029 ENSOARG00020009051 ENSOARG00020009069 ENSOARG00020009082 ENSOARG00020009101 H1-3 (ENSOARG00020009112) ENSOARG00020009146 ENSOARG00020009194 ENSOARG00020009213 Goat MODERN SPECIES 2 ENSCHIG00000027191 SUCLG1 (ENSCHIG00000020517) ENSCHIG00000025501 ENSCHIG00000017397 KCMF1 (ENSCHIG00000000578) ENSCHIG00000009602 ENSCHIG00000009524 TCF7L1 (ENSCHIG00000010768) ENSCHIG00000019585 RETSAT (ENSCHIG00000007516) ELMOD3 (ENSCHIG00000024857) CAPG (ENSCHIG00000021024) ENSCHIG00000009669 MAT2A (ENSCHIG00000026409) #20 GGCX (ENSCHIG00000014770) #21 VAMP8 (ENSCHIG00000016859) #22 VAMP5 (ENSCHIG00000026930) #23 RNF181 (ENSCHIG00000008537) #24 TMEM150A (ENSCHIG00000020450) #25 C2orf68 (ENSCHIG00000026643) #26 USP39 (ENSCHIG00000021013) #27 SFTPB (ENSCHIG00000025259) #28 ENSCHIG00000016379 ENSCHIG00000024407 ATOH8 (ENSCHIG00000011327) #29 ST3GAL5 (ENSCHIG00000021591) #30 POLR1A (ENSCHIG00000018204) #31 PTCD3 (ENSCHIG00000012077) #32 IMMT (ENSCHIG00000026338) #33 MRPL35 (ENSCHIG00000016097) #34 REEP1 (ENSCHIG00000015577) #35 Bovinae ANCESTRAL SPECIES 4 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000010045.k.a.a.a.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.b ENSGT00390000002975.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 Bos ANCESTRAL SPECIES 5 ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Bos_b ANCESTRAL SPECIES 16 ENSGT01030000234543.A.a ENSGT01100000263508.B.a.b.b.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681 ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.b ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005011272 SUCLG1 (ENSBIXG00005005699) DNAH6 (ENSBIXG00005011481) ENSBIXG00005011532 ENSBIXG00005001125 ENSBIXG00005011559 KCMF1 (ENSBIXG00005011582) TCF7L1 (ENSBIXG00005011607) ENSBIXG00005011629 RETSAT (ENSBIXG00005001146) ELMOD3 (ENSBIXG00005011661) CAPG (ENSBIXG00005011729) ENSBIXG00005011750 MAT2A (ENSBIXG00005011796) #20 GGCX (ENSBIXG00005011842) #21 VAMP8 (ENSBIXG00005011878) #22 VAMP5 (ENSBIXG00005001186) #23 RNF181 (ENSBIXG00005011916) #24 TMEM150A (ENSBIXG00005011956) #25 C2orf68 (ENSBIXG00005011982) #26 USP39 (ENSBIXG00005012067) #27 SFTPB (ENSBIXG00005012111) #28 ENSBIXG00005012133 ENSBIXG00005012155 ENSBIXG00005012225 ATOH8 (ENSBIXG00005001275) #29 ST3GAL5 (ENSBIXG00005000387) #30 POLR1A (ENSBIXG00005012344) #31 PTCD3 (ENSBIXG00005012368) #32 IMMT (ENSBIXG00005012441) #33 MRPL35 (ENSBIXG00005001353) #34 Cow MODERN SPECIES 2 ENSBTAG00000050900 SUCLG1 (ENSBTAG00000006075) DNAH6 (ENSBTAG00000049566) TMSB10 (ENSBTAG00000005654) ENSBTAG00000048762 KCMF1 (ENSBTAG00000020630) HIGD1A (ENSBTAG00000031731) TCF7L1 (ENSBTAG00000010111) ENSBTAG00000038116 RETSAT (ENSBTAG00000021934) ELMOD3 (ENSBTAG00000021935) CAPG (ENSBTAG00000005432) ENSBTAG00000048587 MAT2A (ENSBTAG00000020873) #20 GGCX (ENSBTAG00000038477) #21 VAMP8 (ENSBTAG00000023997) #22 VAMP5 (ENSBTAG00000018285) #23 RNF181 (ENSBTAG00000018286) #24 TMEM150A (ENSBTAG00000018289) #25 C11H2orf68 (ENSBTAG00000018291) #26 USP39 (ENSBTAG00000010691) #27 SFTPB (ENSBTAG00000021230) #28 ENSBTAG00000031828 GNLY (ENSBTAG00000053497) ENSBTAG00000047449 ENSBTAG00000039981 ENSBTAG00000047816 ATOH8 (ENSBTAG00000024000) #29 ST3GAL5 (ENSBTAG00000011601) #30 POLR1A (ENSBTAG00000006481) #31 PTCD3 (ENSBTAG00000006482) #32 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000154447.j.b ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.b ENSGT00390000002975.a.a.a ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00390000016950.g ENSGT00920000149138 #31 ENSGT00390000016876.e #32 ENSGT00390000016876.f #32 ENSGT00390000002313 #33 Wild yak MODERN SPECIES 422 TMSB10 (ENSBMUG00000025623) KCMF1 (ENSBMUG00000025612) TCF7L1 (ENSBMUG00000025596) ENSBMUG00000025576 RETSAT (ENSBMUG00000025572) ELMOD3 (ENSBMUG00000025564) CAPG (ENSBMUG00000025555) ENSBMUG00000025549 MAT2A (ENSBMUG00000025546) #20 GGCX (ENSBMUG00000025542) #21 VAMP8 (ENSBMUG00000025534) #22 VAMP5 (ENSBMUG00000025532) #23 RNF181 (ENSBMUG00000025527) #24 TMEM150A (ENSBMUG00000025520) #25 C2orf68 (ENSBMUG00000025510) #26 USP39 (ENSBMUG00000025495) #27 SFTPB (ENSBMUG00000025482) #28 ENSBMUG00000025477 Domestic yak MODERN SPECIES 28 ENSBGRG00000006853 ENSBGRG00000006831 SUCLG1 (ENSBGRG00000006774) DNAH6 (ENSBGRG00000006436) TMSB10 (ENSBGRG00000006399) KCMF1 (ENSBGRG00000006294) ENSBGRG00000006276 TCF7L1 (ENSBGRG00000006205) ENSBGRG00000006196 RETSAT (ENSBGRG00000006129) ELMOD3 (ENSBGRG00000005978) CAPG (ENSBGRG00000005930) SH2D6 (ENSBGRG00000005852) MAT2A (ENSBGRG00000005776) #20 GGCX (ENSBGRG00000005624) #21 VAMP8 (ENSBGRG00000005579) #22 VAMP5 (ENSBGRG00000005556) #23 RNF181 (ENSBGRG00000005520) #24 TMEM150A (ENSBGRG00000005475) #25 C2orf68 (ENSBGRG00000005435) #26 USP39 (ENSBGRG00000004978) #27 SFTPB (ENSBGRG00000004867) #28 ENSBGRG00000004844 ENSBGRG00000004722 ATOH8 (ENSBGRG00000004693) #29 ST3GAL5 (ENSBGRG00000004605) #30 ENSBGRG00000004581 POLR1A (ENSBGRG00000004230) #31 ENSBGRG00000004172 #32 ENSBGRG00000004052 #32 IMMT (ENSBGRG00000003684) #33 American bison MODERN SPECIES 3338 SUCLG1 (ENSBBBG00000020010) DNAH6 (ENSBBBG00000019994) TMSB10 (ENSBBBG00000019860) ENSBBBG00000019847 TCF7L1 (ENSBBBG00000019828) ENSBBBG00000019799 RETSAT (ENSBBBG00000019791) ELMOD3 (ENSBBBG00000019773) CAPG (ENSBBBG00000005165) ENSBBBG00000019725 MAT2A (ENSBBBG00000019713) #20 GGCX (ENSBBBG00000019704) #21 VAMP8 (ENSBBBG00000007673) #22 VAMP5 (ENSBBBG00000019660) #23 RNF181 (ENSBBBG00000005186) #24 TMEM150A (ENSBBBG00000019657) #25 USP39 (ENSBBBG00000019591) #27 SFTPB (ENSBBBG00000005209) #28 ENSBBBG00000019476 ENSBBBG00000005222 ENSBBBG00000006905 ATOH8 (ENSBBBG00000005211) #29 ST3GAL5 (ENSBBBG00000019418) #30 ENSBBBG00000019343 POLR1A (ENSBBBG00000007513) #31 PTCD3 (ENSBBBG00000007099) #32 IMMT (ENSBBBG00000019237) #33 MRPL35 (ENSBBBG00000019211) #34 Siberian musk deer MODERN SPECIES 243 ENSMMSG00000010974 SUCLG1 (ENSMMSG00000011015) DNAH6 (ENSMMSG00000011077) ENSMMSG00000011387 KCMF1 (ENSMMSG00000011415) TCF7L1 (ENSMMSG00000011504) ENSMMSG00000011551 RETSAT (ENSMMSG00000011571) ELMOD3 (ENSMMSG00000011616) CAPG (ENSMMSG00000011668) SH2D6 (ENSMMSG00000011734) ENSMMSG00000011818 #20 GGCX (ENSMMSG00000011896) #21 VAMP8 (ENSMMSG00000011993) #22 VAMP5 (ENSMMSG00000012013) #23 RNF181 (ENSMMSG00000012036) #24 TMEM150A (ENSMMSG00000012073) #25 C2orf68 (ENSMMSG00000012110) #26 USP39 (ENSMMSG00000012147) #27 SFTPB (ENSMMSG00000012359) #28 ENSMMSG00000012385 ATOH8 (ENSMMSG00000012402) #29 ST3GAL5 (ENSMMSG00000012427) #30 POLR1A (ENSMMSG00000012542) #31 PTCD3 (ENSMMSG00000012741) #32 IMMT (ENSMMSG00000012806) #33 MRPL35 (ENSMMSG00000012898) #34 REEP1 (ENSMMSG00000012954) #35 KDM3A (ENSMMSG00000013019) #36 Yarkand deer MODERN SPECIES 2 CTNNA2 (ENSCHYG00000011228) ENSCHYG00000011081 SUCLG1 (ENSCHYG00000010947) DNAH6 (ENSCHYG00000010726) TMSB10 (ENSCHYG00000010662) KCMF1 (ENSCHYG00000010620) TCF7L1 (ENSCHYG00000010256) ENSCHYG00000010219 ENSCHYG00000010201 RETSAT (ENSCHYG00000010029) ELMOD3 (ENSCHYG00000009802) ENSCHYG00000009746 ENSCHYG00000009409 MAT2A (ENSCHYG00000009334) #20 GGCX (ENSCHYG00000009020) #21 VAMP8 (ENSCHYG00000008959) #22 RNF181 (ENSCHYG00000008920) #24 TMEM150A (ENSCHYG00000008687) #25 C2orf68 (ENSCHYG00000008648) #26 USP39 (ENSCHYG00000008478) #27 SFTPB (ENSCHYG00000008422) #28 ENSCHYG00000008369 ENSCHYG00000008347 ATOH8 (ENSCHYG00000008328) #29 ST3GAL5 (ENSCHYG00000008185) #30 POLR1A (ENSCHYG00000007959) #31 PTCD3 (ENSCHYG00000007717) #32 IMMT (ENSCHYG00000007615) #33 MRPL35 (ENSCHYG00000007551) #34 REEP1 (ENSCHYG00000007409) #35 KDM3A (ENSCHYG00000007307) #36 Cetacea ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Odontoceti ANCESTRAL SPECIES 15 ENSGT01000000219921 ENSGT00550000074828.a.g.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00940000154519.d ENSGT01000000219921 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT01000000219921 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000165681.d ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000154519.d ENSGT01000000219921 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000165681.d ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00940000165659.a ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Narwhal MODERN SPECIES 305 ENSMMNG00015006568 ENSMMNG00015006559 SUCLG1 (ENSMMNG00015006541) DNAH6 (ENSMMNG00015006430) ENSMMNG00015006372 TMSB10 (ENSMMNG00015006357) KCMF1 (ENSMMNG00015006344) TCF7L1 (ENSMMNG00015006319) ENSMMNG00015006302 RETSAT (ENSMMNG00015006280) ELMOD3 (ENSMMNG00015006250) CAPG (ENSMMNG00015006216) SH2D6 (ENSMMNG00015006178) MAT2A (ENSMMNG00015006153) #20 GGCX (ENSMMNG00015006106) #21 VAMP8 (ENSMMNG00015006072) #22 VAMP5 (ENSMMNG00015006056) #23 RNF181 (ENSMMNG00015006028) #24 TMEM150A (ENSMMNG00015005993) #25 C2orf68 (ENSMMNG00015005970) #26 USP39 (ENSMMNG00015005861) #27 SFTPB (ENSMMNG00015005711) #28 ATOH8 (ENSMMNG00015005651) #29 ST3GAL5 (ENSMMNG00015005607) #30 ENSMMNG00015005573 POLR1A (ENSMMNG00015005538) #31 PTCD3 (ENSMMNG00015005490) #32 IMMT (ENSMMNG00015005456) #33 MRPL35 (ENSMMNG00015005420) #34 REEP1 (ENSMMNG00015005391) #35 KDM3A (ENSMMNG00015005358) #36 Beluga whale MODERN SPECIES 61 CTNNA2 (ENSDLEG00000015448) ENSDLEG00000015731 ENSDLEG00000015822 SUCLG1 (ENSDLEG00000015835) DNAH6 (ENSDLEG00000015865) ENSDLEG00000015940 KCMF1 (ENSDLEG00000015950) TCF7L1 (ENSDLEG00000016012) ENSDLEG00000016031 RETSAT (ENSDLEG00000016040) ELMOD3 (ENSDLEG00000016055) CAPG (ENSDLEG00000016089) ENSDLEG00000016109 MAT2A (ENSDLEG00000016119) #20 GGCX (ENSDLEG00000016129) #21 VAMP8 (ENSDLEG00000016147) #22 VAMP5 (ENSDLEG00000016153) #23 RNF181 (ENSDLEG00000016163) #24 TMEM150A (ENSDLEG00000016207) #25 CUNH2orf68 (ENSDLEG00000016225) #26 USP39 (ENSDLEG00000016236) #27 ENSDLEG00000016291 #28 ATOH8 (ENSDLEG00000016446) #29 ST3GAL5 (ENSDLEG00000016463) #30 ENSDLEG00000016502 POLR1A (ENSDLEG00000016519) #31 PTCD3 (ENSDLEG00000016579) #32 IMMT (ENSDLEG00000016629) #33 MRPL35 (ENSDLEG00000016654) #34 REEP1 (ENSDLEG00000016669) #35 KDM3A (ENSDLEG00000016750) #36 Dolphin MODERN SPECIES 1097 TCF7L1 (ENSTTRG00000008959) RETSAT (ENSTTRG00000008962) ENSTTRG00000008963 CAPG (ENSTTRG00000008964) ENSTTRG00000008965 MAT2A (ENSTTRG00000008966) #20 GGCX (ENSTTRG00000008967) #21 VAMP8 (ENSTTRG00000008968) #22 VAMP5 (ENSTTRG00000008969) #23 RNF181 (ENSTTRG00000008970) #24 TMEM150A (ENSTTRG00000008971) #25 C2orf68 (ENSTTRG00000008972) #26 USP39 (ENSTTRG00000008973) #27 SFTPB (ENSTTRG00000008974) #28 Sperm whale MODERN SPECIES 531 VAMP8 (ENSPCTG00005021132) #22 VAMP5 (ENSPCTG00005021120) #23 RNF181 (ENSPCTG00005021092) #24 CUNH2orf68 (ENSPCTG00005021019) #25 Blue whale MODERN SPECIES 4 CTNNA2 (ENSBMSG00010019658) ENSBMSG00010019485 SUCLG1 (ENSBMSG00010019445) DNAH6 (ENSBMSG00010018565) ENSBMSG00010018427 TRABD2A (ENSBMSG00010018310) TMSB10 (ENSBMSG00010018283) KCMF1 (ENSBMSG00010018181) TCF7L1 (ENSBMSG00010018055) RETSAT (ENSBMSG00010018024) ELMOD3 (ENSBMSG00010017999) CAPG (ENSBMSG00010017946) SH2D6 (ENSBMSG00010017841) MAT2A (ENSBMSG00010017771) #20 GGCX (ENSBMSG00010017708) #21 VAMP8 (ENSBMSG00010017652) #22 VAMP5 (ENSBMSG00010017623) #23 RNF181 (ENSBMSG00010017562) #24 TMEM150A (ENSBMSG00010017376) #25 C2orf68 (ENSBMSG00010017326) #26 USP39 (ENSBMSG00010017135) #27 ENSBMSG00010017087 #28 ENSBMSG00010017048 #28 ATOH8 (ENSBMSG00010017024) #29 ST3GAL5 (ENSBMSG00010016994) #30 ENSBMSG00010016964 ENSBMSG00010016939 POLR1A (ENSBMSG00010016886) #31 PTCD3 (ENSBMSG00010016832) #32 IMMT (ENSBMSG00010016688) #33 MRPL35 (ENSBMSG00010016621) #34 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Carnivora ANCESTRAL SPECIES 19 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Caniformia ANCESTRAL SPECIES 18 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Canidae DUPLICATION Canidae ANCESTRAL SPECIES 25 ENSGT00940000161705 ENSGT00940000164757 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b.c #22 ENSGT00730000111371.c #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.c ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000161705 ENSGT00940000164757 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b.c #22 ENSGT00730000111371.c #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975.c ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Dog MODERN SPECIES 8 ENSCAFG00845014940 SUCLG1 (ENSCAFG00845014907) ENSCAFG00845014884 DNAH6 (ENSCAFG00845014818) TRABD2A (ENSCAFG00845014743) ENSCAFG00845014717 ENSCAFG00845014677 TCF7L1 (ENSCAFG00845014626) ENSCAFG00845014600 RETSAT (ENSCAFG00845014569) ELMOD3 (ENSCAFG00845014524) CAPG (ENSCAFG00845014410) SH2D6 (ENSCAFG00845014343) MAT2A (ENSCAFG00845014310) #20 GGCX (ENSCAFG00845014233) #21 VAMP8 (ENSCAFG00845014183) #22 VAMP5 (ENSCAFG00845014173) #23 RNF181 (ENSCAFG00845014162) #24 TMEM150A (ENSCAFG00845014140) #25 C17H2orf68 (ENSCAFG00845014119) #26 USP39 (ENSCAFG00845014083) #27 SFTPB (ENSCAFG00845014035) #28 ENSCAFG00845013982 ENSCAFG00845013890 ATOH8 (ENSCAFG00845013832) #29 ST3GAL5 (ENSCAFG00845013809) #30 POLR1A (ENSCAFG00845013628) #31 PTCD3 (ENSCAFG00845013553) #32 IMMT (ENSCAFG00845013443) #33 MRPL35 (ENSCAFG00845013398) #34 REEP1 (ENSCAFG00845013348) #35 Dingo MODERN SPECIES 223 DNAH6 (ENSCAFG00020014555) ENSCAFG00020014589 TRABD2A (ENSCAFG00020014595) ENSCAFG00020014598 ENSCAFG00020014600 ENSCAFG00020014601 ENSCAFG00020014602 TCF7L1 (ENSCAFG00020014607) ENSCAFG00020014645 RETSAT (ENSCAFG00020014651) ELMOD3 (ENSCAFG00020014656) CAPG (ENSCAFG00020014661) ENSCAFG00020014664 MAT2A (ENSCAFG00020014669) #20 GGCX (ENSCAFG00020014674) #21 ENSCAFG00020014679 #22 ENSCAFG00020014680 #23 RNF181 (ENSCAFG00020014682) #24 TMEM150A (ENSCAFG00020014685) #25 C2orf68 (ENSCAFG00020014687) #26 USP39 (ENSCAFG00020014690) #27 SFTPB (ENSCAFG00020014705) #28 ENSCAFG00020014715 ATOH8 (ENSCAFG00020014718) #29 ST3GAL5 (ENSCAFG00020014720) #30 POLR1A (ENSCAFG00020014752) #31 PTCD3 (ENSCAFG00020015827) #32 IMMT (ENSCAFG00020015997) #33 MRPL35 (ENSCAFG00020016017) #34 REEP1 (ENSCAFG00020016020) #35 KDM3A (ENSCAFG00020016056) #36 Red fox MODERN SPECIES 16 LRRTM1 (ENSVVUG00000003240) CTNNA2 (ENSVVUG00000003221) ENSVVUG00000003155 SUCLG1 (ENSVVUG00000003108) DNAH6 (ENSVVUG00000002546) TRABD2A (ENSVVUG00000002449) KCMF1 (ENSVVUG00000002440) TCF7L1 (ENSVVUG00000001883) TGOLN2 (ENSVVUG00000001860) RETSAT (ENSVVUG00000001843) ELMOD3 (ENSVVUG00000001825) CAPG (ENSVVUG00000001799) ENSVVUG00000001782 MAT2A (ENSVVUG00000001771) #20 GGCX (ENSVVUG00000001756) #21 VAMP8 (ENSVVUG00000001728) #22 ENSVVUG00000001721 #23 RNF181 (ENSVVUG00000001710) #24 TMEM150A (ENSVVUG00000001694) #25 CUNH2orf68 (ENSVVUG00000001683) #26 USP39 (ENSVVUG00000001660) #27 SFTPB (ENSVVUG00000001389) #28 ENSVVUG00000001345 ENSVVUG00000001338 ATOH8 (ENSVVUG00000001304) #29 ST3GAL5 (ENSVVUG00000001293) #30 POLR1A (ENSVVUG00000001245) #31 PTCD3 (ENSVVUG00000001203) #32 IMMT (ENSVVUG00000000129) #33 MRPL35 (ENSVVUG00000000063) #34 REEP1 (ENSVVUG00000028774) #35 Canidae ANCESTRAL SPECIES ENSGT00940000160325.b.d #22 Canis_lupus ANCESTRAL SPECIES 30 ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT00940000155440.d.j ENSGT01030000234574.B.c.a ENSGT00530000063424.b ENSGT00390000003791 ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00940000153771.B ENSGT00940000156240.f ENSGT00940000165276 ENSGT00940000157329 ENSGT00940000160325.b.d #22 ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ##25 ENSGT00440000039914 ENSGT00940000154426.b.b.x.a ENSGT00940000158010 ENSGT00390000016988.a.a.a.a.a.a.b.b ENSGT00940000155816.b ENSGT00940000159393 ENSGT00940000159775 ENSGT00390000016547 ENSGT00940000158449 Dog MODERN SPECIES 25 WDFY3 (ENSCAFG00845022217) CDS1 (ENSCAFG00845022114) ENSCAFG00845022070 NKX6-1 (ENSCAFG00845022031) ENSCAFG00845022001 GPAT3 (ENSCAFG00845021887) ABRAXAS1 (ENSCAFG00845021759) MRPS18C (ENSCAFG00845021626) ENSCAFG00845021572 ENSCAFG00845021505 HPSE (ENSCAFG00845021381) COQ2 (ENSCAFG00845021322) ENSCAFG00845021294 ENSCAFG00845021212 PLAC8B (ENSCAFG00845021150) ENSCAFG00845021087 #22 LIN54 (ENSCAFG00845020955) THAP9 (ENSCAFG00845020757) SEC31A (ENSCAFG00845019603) SCD5 (ENSCAFG00845019428) ENSCAFG00845019398 TMEM150C (ENSCAFG00845019337) ##25 ENOPH1 (ENSCAFG00845019277) HNRNPDL (ENSCAFG00845018924) HNRNPD (ENSCAFG00845018743) ENSCAFG00845018639 RASGEF1B (ENSCAFG00845018382) PRKG2 (ENSCAFG00845018088) BMP3 (ENSCAFG00845017996) CFAP299 (ENSCAFG00845017920) FGF5 (ENSCAFG00845017837) Dingo MODERN SPECIES 342 MAPK10 (ENSCAFG00020009946) ARHGAP24 (ENSCAFG00020010087) WDFY3 (ENSCAFG00020010121) CDS1 (ENSCAFG00020010454) NKX6-1 (ENSCAFG00020010474) ENSCAFG00020010476 GPAT3 (ENSCAFG00020010481) ABRAXAS1 (ENSCAFG00020010484) MRPS18C (ENSCAFG00020010491) HELQ (ENSCAFG00020010495) HPSE (ENSCAFG00020010498) COQ2 (ENSCAFG00020010543) ENSCAFG00020010561 ENSCAFG00020010564 PLAC8 (ENSCAFG00020010575) ENSCAFG00020010578 #22 COPS4 (ENSCAFG00020010592) LIN54 (ENSCAFG00020010600) ENSCAFG00020010647 SEC31A (ENSCAFG00020010660) SCD5 (ENSCAFG00020010695) TMEM150C (ENSCAFG00020010697) ##25 ENOPH1 (ENSCAFG00020010698) HNRNPDL (ENSCAFG00020010699) HNRNPD (ENSCAFG00020010713) ENSCAFG00020010723 ENSCAFG00020010724 RASGEF1B (ENSCAFG00020010726) PRKG2 (ENSCAFG00020010735) BMP3 (ENSCAFG00020010793) ENSCAFG00020010807 Caniformia_b ANCESTRAL SPECIES 11 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Ursidae ANCESTRAL SPECIES 9 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000165681 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305.b ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Ursus ANCESTRAL SPECIES 55 ENSGT00940000162300.n ENSGT00940000162300.m ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305.b ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Polar bear MODERN SPECIES 223 ENSUMAG00000006060 LRRTM1 (ENSUMAG00000006088) ENSUMAG00000006122 ENSUMAG00000006177 SUCLG1 (ENSUMAG00000006187) DNAH6 (ENSUMAG00000006234) KCMF1 (ENSUMAG00000006381) TCF7L1 (ENSUMAG00000006395) ENSUMAG00000006403 RETSAT (ENSUMAG00000006406) ELMOD3 (ENSUMAG00000006414) CAPG (ENSUMAG00000006430) ENSUMAG00000006447 MAT2A (ENSUMAG00000006459) #20 GGCX (ENSUMAG00000006501) #21 VAMP8 (ENSUMAG00000006509) #22 ENSUMAG00000006511 #23 RNF181 (ENSUMAG00000006514) #24 TMEM150A (ENSUMAG00000006515) #25 C2orf68 (ENSUMAG00000006518) #26 USP39 (ENSUMAG00000006527) #27 SFTPB (ENSUMAG00000006563) #28 ENSUMAG00000006576 ST3GAL5 (ENSUMAG00000006591) #30 POLR1A (ENSUMAG00000006700) #31 PTCD3 (ENSUMAG00000007839) #32 IMMT (ENSUMAG00000007873) #33 MRPL35 (ENSUMAG00000007891) #34 REEP1 (ENSUMAG00000007896) #35 KDM3A (ENSUMAG00000007948) #36 CHMP3 (ENSUMAG00000007971) #37 American black bear MODERN SPECIES 520 KCMF1 (ENSUAMG00000027562) TCF7L1 (ENSUAMG00000027565) ENSUAMG00000027574 RETSAT (ENSUAMG00000027577) ELMOD3 (ENSUAMG00000027578) CAPG (ENSUAMG00000027580) ENSUAMG00000027581 MAT2A (ENSUAMG00000027582) #20 GGCX (ENSUAMG00000027583) #21 VAMP8 (ENSUAMG00000027584) #22 VAMP5 (ENSUAMG00000027585) #23 RNF181 (ENSUAMG00000027586) #24 TMEM150A (ENSUAMG00000027587) #25 C2orf68 (ENSUAMG00000027589) #26 USP39 (ENSUAMG00000027590) #27 SFTPB (ENSUAMG00000027593) #28 Giant Panda MODERN SPECIES 14 ENSAMEG00000030394 CTNNA2 (ENSAMEG00000010800) LRRTM1 (ENSAMEG00000019333) ENSAMEG00000018718 SUCLG1 (ENSAMEG00000001962) DNAH6 (ENSAMEG00000002004) TRABD2A (ENSAMEG00000002027) TCF7L1 (ENSAMEG00000002051) ENSAMEG00000031071 RETSAT (ENSAMEG00000002091) ENSAMEG00000002137 CAPG (ENSAMEG00000002173) ENSAMEG00000028845 MAT2A (ENSAMEG00000002191) #20 GGCX (ENSAMEG00000002214) #21 VAMP8 (ENSAMEG00000002268) #22 VAMP5 (ENSAMEG00000031349) #23 USP39 (ENSAMEG00000002291) #27 ENSAMEG00000002282 #25 C2orf68 (ENSAMEG00000002290) #26 SFTPB (ENSAMEG00000002317) #28 ATOH8 (ENSAMEG00000025438) #29 ST3GAL5 (ENSAMEG00000005791) #30 POLR1A (ENSAMEG00000005807) #31 PTCD3 (ENSAMEG00000005861) #32 IMMT (ENSAMEG00000005919) #33 MRPL35 (ENSAMEG00000005978) #34 REEP1 (ENSAMEG00000024084) #35 KDM3A (ENSAMEG00000009939) #36 CHMP3 (ENSAMEG00000009971) #37 RNF103 (ENSAMEG00000009973) Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Ferret MODERN SPECIES 169 ENSMPUG00000008534 LRRTM1 (ENSMPUG00000018841) ENSMPUG00000008539 SUCLG1 (ENSMPUG00000008566) DNAH6 (ENSMPUG00000008574) TRABD2A (ENSMPUG00000008622) KCMF1 (ENSMPUG00000008632) TCF7L1 (ENSMPUG00000008657) ENSMPUG00000008755 RETSAT (ENSMPUG00000008763) ELMOD3 (ENSMPUG00000008834) CAPG (ENSMPUG00000008841) SH2D6 (ENSMPUG00000008909) MAT2A (ENSMPUG00000008933) #20 GGCX (ENSMPUG00000009028) #21 VAMP8 (ENSMPUG00000009038) #22 VAMP5 (ENSMPUG00000009046) #23 RNF181 (ENSMPUG00000009053) #24 TMEM150A (ENSMPUG00000009058) #25 C2orf68 (ENSMPUG00000009069) #26 USP39 (ENSMPUG00000009096) #27 SFTPB (ENSMPUG00000009109) #28 ENSMPUG00000009117 ATOH8 (ENSMPUG00000009121) #29 ST3GAL5 (ENSMPUG00000009127) #30 POLR1A (ENSMPUG00000009135) #31 PTCD3 (ENSMPUG00000009167) #32 IMMT (ENSMPUG00000009193) #33 MRPL35 (ENSMPUG00000009217) #34 REEP1 (ENSMPUG00000009225) #35 KDM3A (ENSMPUG00000009253) #36 American mink MODERN SPECIES 8 LRRTM1 (ENSNVIG00000019580) CTNNA2 (ENSNVIG00000019316) SUCLG1 (ENSNVIG00000019244) DNAH6 (ENSNVIG00000019022) TRABD2A (ENSNVIG00000018979) TMSB10 (ENSNVIG00000018969) KCMF1 (ENSNVIG00000018936) TCF7L1 (ENSNVIG00000018900) ENSNVIG00000018872 RETSAT (ENSNVIG00000018862) ELMD3 (ENSNVIG00000018754) CAPG (ENSNVIG00000018696) ENSNVIG00000018664 MAT2A (ENSNVIG00000018646) #20 GGCX (ENSNVIG00000018617) #21 VAMP8 (ENSNVIG00000018603) #22 VAMP5 (ENSNVIG00000018599) #23 RNF181 (ENSNVIG00000018591) #24 TMEM150A (ENSNVIG00000018553) #25 C2orf68 (ENSNVIG00000018547) #26 ENSNVIG00000018464 #27 SFTPB (ENSNVIG00000018449) #28 ATOH8 (ENSNVIG00000018445) #29 ST3GAL5 (ENSNVIG00000018397) #30 POLR1A (ENSNVIG00000018346) #31 PTCD3 (ENSNVIG00000018319) #32 IMMT (ENSNVIG00000018239) #33 MRPL35 (ENSNVIG00000018218) #34 REEP1 (ENSNVIG00000018129) #35 KDM3A (ENSNVIG00000018097) #36 CHMP3 (ENSNVIG00000018078) #37 Felidae ANCESTRAL SPECIES 3 ENSGT00940000161705 ENSGT00940000154818.a.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.k #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Panthera ANCESTRAL SPECIES 2 ENSGT01030000234543.A.a ENSGT00940000154818.a.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.k #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Tiger MODERN SPECIES 170 KCMF1 (ENSPTIG00000012661) TCF7L1 (ENSPTIG00000012726) ENSPTIG00000012874 RETSAT (ENSPTIG00000012901) ELMOD3 (ENSPTIG00000012942) CAPG (ENSPTIG00000013355) ENSPTIG00000013587 MAT2A (ENSPTIG00000013684) #20 GGCX (ENSPTIG00000013923) #21 VAMP8 (ENSPTIG00000014405) #22 VAMP5 (ENSPTIG00000014511) #23 RNF181 (ENSPTIG00000014685) #24 TMEM150A (ENSPTIG00000015089) #25 C2orf68 (ENSPTIG00000015638) #26 USP39 (ENSPTIG00000015767) #27 SFTPB (ENSPTIG00000016782) #28 ST3GAL5 (ENSPTIG00000017771) #30 POLR1A (ENSPTIG00000018783) #31 PTCD3 (ENSPTIG00000019091) #32 IMMT (ENSPTIG00000019189) #33 ENSPTIG00000019867 #34 REEP1 (ENSPTIG00000020564) #35 KDM3A (ENSPTIG00000003722) #36 CHMP3 (ENSPTIG00000008355) #37 RNF103 (ENSPTIG00000008667) Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547.k #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 leopard MODERN SPECIES ENSPPRG00000007459 ENSPPRG00000007449 ENSPPRG00000020355 SUCLG1 (ENSPPRG00000007440) DNAH6 (ENSPPRG00000007406) TRABD2A (ENSPPRG00000007266) KCMF1 (ENSPPRG00000007234) TCF7L1 (ENSPPRG00000007227) ENSPPRG00000007210 RETSAT (ENSPPRG00000007198) ELMOD3 (ENSPPRG00000007176) CAPG (ENSPPRG00000007161) ENSPPRG00000007139 MAT2A (ENSPPRG00000007128) #20 GGCX (ENSPPRG00000007103) #21 VAMP8 (ENSPPRG00000007071) #22 VAMP5 (ENSPPRG00000007056) #23 RNF181 (ENSPPRG00000007048) #24 TMEM150A (ENSPPRG00000007030) #25 C2orf68 (ENSPPRG00000006996) #26 USP39 (ENSPPRG00000006971) #27 SFTPB (ENSPPRG00000006829) #28 ATOH8 (ENSPPRG00000006780) #29 ST3GAL5 (ENSPPRG00000006759) #30 POLR1A (ENSPPRG00000006702) #31 PTCD3 (ENSPPRG00000006644) #32 IMMT (ENSPPRG00000006625) #33 ENSPPRG00000006561 #34 REEP1 (ENSPPRG00000006542) #35 KDM3A (ENSPPRG00000006509) #36 CHMP3 (ENSPPRG00000006445) #37 lion MODERN SPECIES 3 ENSPLOG00000002329 ENSPLOG00000002306 SUCLG1 (ENSPLOG00000002282) DNAH6 (ENSPLOG00000002257) TRABD2A (ENSPLOG00000002215) TMSB10 (ENSPLOG00000002183) KCMF1 (ENSPLOG00000002171) TCF7L1 (ENSPLOG00000002149) ENSPLOG00000002132 RETSAT (ENSPLOG00000002122) ELMOD3 (ENSPLOG00000002100) CAPG (ENSPLOG00000002073) SH2D6 (ENSPLOG00000002043) MAT2A (ENSPLOG00000002012) #20 GGCX (ENSPLOG00000001958) #21 VAMP8 (ENSPLOG00000001925) #22 VAMP5 (ENSPLOG00000001920) #23 RNF181 (ENSPLOG00000001904) #24 TMEM150A (ENSPLOG00000001876) #25 C2orf68 (ENSPLOG00000001851) #26 USP39 (ENSPLOG00000001816) #27 SFTPB (ENSPLOG00000001786) #28 ATOH8 (ENSPLOG00000001776) #29 ST3GAL5 (ENSPLOG00000001752) #30 POLR1A (ENSPLOG00000001675) #31 PTCD3 (ENSPLOG00000001609) #32 IMMT (ENSPLOG00000001563) #33 MRPL35 (ENSPLOG00000001537) #34 REEP1 (ENSPLOG00000001464) #35 KDM3A (ENSPLOG00000001402) #36 CHMP3 (ENSPLOG00000001384) #37 Cat MODERN SPECIES 2 ENSFCAG00000039414 ENSFCAG00000031148 SUCLG1 (ENSFCAG00000005140) DNAH6 (ENSFCAG00000000768) TRABD2A (ENSFCAG00000000770) TMSB10 (ENSFCAG00000046545) KCMF1 (ENSFCAG00000044295) TCF7L1 (ENSFCAG00000003376) ENSFCAG00000037179 RETSAT (ENSFCAG00000003377) ELMOD3 (ENSFCAG00000003378) CAPG (ENSFCAG00000003379) SH2D6 (ENSFCAG00000003381) MAT2A (ENSFCAG00000011965) #20 GGCX (ENSFCAG00000011967) #21 VAMP8 (ENSFCAG00000011968) #22 VAMP5 (ENSFCAG00000024700) #23 RNF181 (ENSFCAG00000011969) #24 TMEM150A (ENSFCAG00000024246) #25 CA3H2orf68 (ENSFCAG00000028683) #26 USP39 (ENSFCAG00000011972) #27 SFTPB (ENSFCAG00000018868) #28 ATOH8 (ENSFCAG00000038037) #29 ST3GAL5 (ENSFCAG00000015447) #30 POLR1A (ENSFCAG00000008966) #31 PTCD3 (ENSFCAG00000008967) #32 IMMT (ENSFCAG00000008968) #33 ENSFCAG00000040448 #34 REEP1 (ENSFCAG00000008970) #35 KDM3A (ENSFCAG00000010506) #36 CHMP3 (ENSFCAG00000039184) #37 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Chiroptera ANCESTRAL SPECIES 10 ENSGT01030000234543.A.a ENSGT00940000160433.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160433.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00910000146589 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Microbat MODERN SPECIES 1706 MAT2A (ENSMLUG00000005348) #20 GGCX (ENSMLUG00000005356) #21 VAMP8 (ENSMLUG00000005363) #22 VAMP5 (ENSMLUG00000028456) #23 RNF181 (ENSMLUG00000027738) #24 TMEM150A (ENSMLUG00000026810) #25 C2orf68 (ENSMLUG00000005365) #26 USP39 (ENSMLUG00000005367) #27 SFTPB (ENSMLUG00000005372) #28 ENSMLUG00000001579 Greater horseshoe bat MODERN SPECIES 4 CTNNA2 (ENSRFEG00010013591) ENSRFEG00010013508 SUCLG1 (ENSRFEG00010013453) DNAH6 (ENSRFEG00010012455) TMSB10 (ENSRFEG00010012256) KCMF1 (ENSRFEG00010012206) ENSRFEG00010012190 TCF7L1 (ENSRFEG00010012140) ENSRFEG00010012085 RETSAT (ENSRFEG00010012053) ELMOD3 (ENSRFEG00010011983) CAPG (ENSRFEG00010011887) ENSRFEG00010011863 MAT2A (ENSRFEG00010011814) #20 GGCX (ENSRFEG00010011702) #21 VAMP8 (ENSRFEG00010011634) #22 ENSRFEG00010011487 #23 TMEM150A (ENSRFEG00010011398) #25 C2orf68 (ENSRFEG00010011347) #26 USP39 (ENSRFEG00010010822) #27 SFTPB (ENSRFEG00010010754) #28 ENSRFEG00010010730 ATOH8 (ENSRFEG00010010652) #29 ST3GAL5 (ENSRFEG00010010531) #30 POLR1A (ENSRFEG00010010422) #31 PTCD3 (ENSRFEG00010010292) #32 IMMT (ENSRFEG00010009645) #33 MRPL35 (ENSRFEG00010009536) #34 REEP1 (ENSRFEG00010009322) #35 KDM3A (ENSRFEG00010009255) #36 CHMP3 (ENSRFEG00010009136) #37 Megabat MODERN SPECIES 2127 MAT2A (ENSPVAG00000015346) #20 GGCX (ENSPVAG00000015347) #21 VAMP8 (ENSPVAG00000015348) #22 VAMP5 (ENSPVAG00000015351) #23 RNF181 (ENSPVAG00000015352) #24 TMEM150A (ENSPVAG00000015354) #25 C2orf68 (ENSPVAG00000015355) #26 USP39 (ENSPVAG00000015356) #27 SFTPB (ENSPVAG00000015359) #28 ENSPVAG00000015360 Equus ANCESTRAL SPECIES 7 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000165681 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000002975 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 Horse MODERN SPECIES 6 ENSECAG00000046045 ENSECAG00000057371 ENSECAG00000059635 DNAH6 (ENSECAG00000011573) ENSECAG00000038584 KCMF1 (ENSECAG00000024834) TRABD2A (ENSECAG00000010499) TCF7L1 (ENSECAG00000022931) ENSECAG00000037048 RETSAT (ENSECAG00000010342) ELMOD3 (ENSECAG00000020629) CAPG (ENSECAG00000015128) SH2D6 (ENSECAG00000013097) MAT2A (ENSECAG00000007391) #20 GGCX (ENSECAG00000010458) #21 VAMP8 (ENSECAG00000009514) #22 VAMP5 (ENSECAG00000007788) #23 RNF181 (ENSECAG00000000327) TMEM150A (ENSECAG00000017462) #25 USP39 (ENSECAG00000002856) #27 SFTPB (ENSECAG00000019375) #28 GNLY (ENSECAG00000015819) ATOH8 (ENSECAG00000039231) #29 ST3GAL5 (ENSECAG00000011464) #30 POLR1A (ENSECAG00000010092) #31 PTCD3 (ENSECAG00000020623) #32 ENSECAG00000048487 IMMT (ENSECAG00000024569) #33 MRPL35 (ENSECAG00000048642) #34 REEP1 (ENSECAG00000024247) #35 KDM3A (ENSECAG00000007369) #36 Donkey MODERN SPECIES 26 ENSEASG00005001226 SUCLG1 (ENSEASG00005001258) DNAH6 (ENSEASG00005001279) TRABD2A (ENSEASG00005001397) ENSEASG00005032677 ENSEASG00005001404 ENSEASG00005030964 TCF7L1 (ENSEASG00005001412) ENSEASG00005001427 RETSAT (ENSEASG00005027102) ENSEASG00005001441 CAPG (ENSEASG00005001445) SH2D6 (ENSEASG00005001453) MAT2A (ENSEASG00005001463) #20 GGCX (ENSEASG00005001468) #21 VAMP8 (ENSEASG00005023642) #22 VAMP5 (ENSEASG00005001487) #23 RNF181 (ENSEASG00005029086) #24 TMEM150A (ENSEASG00005001495) #25 ENSEASG00005033768 #26 USP39 (ENSEASG00005001505) #27 SFTPB (ENSEASG00005001518) #28 ENSEASG00005001603 ATOH8 (ENSEASG00005001607) #29 ST3GAL5 (ENSEASG00005001613) #30 POLR1A (ENSEASG00005001625) #31 PTCD3 (ENSEASG00005001638) #32 IMMT (ENSEASG00005001647) #33 MRPL35 (ENSEASG00005001655) #34 REEP1 (ENSEASG00005001661) #35 KDM3A (ENSEASG00005001676) #36 Atlantogenata ANCESTRAL SPECIES 98 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Afrotheria ANCESTRAL SPECIES 119 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Afrotheria_a ANCESTRAL SPECIES 121 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 ENSGT00940000160135 #36 ENSGT00950000182832.C #37 Elephant MODERN SPECIES 589 ENSLAFG00000031540 SUCLG1 (ENSLAFG00000014517) DNAH6 (ENSLAFG00000009483) TMSB10 (ENSLAFG00000021694) KCMF1 (ENSLAFG00000018643) TCF7L1 (ENSLAFG00000016275) ENSLAFG00000005443 RETSAT (ENSLAFG00000016282) ELMOD3 (ENSLAFG00000016291) CAPG (ENSLAFG00000016295) ENSLAFG00000021536 MAT2A (ENSLAFG00000018042) #20 GGCX (ENSLAFG00000018045) #21 VAMP8 (ENSLAFG00000001520) #22 VAMP5 (ENSLAFG00000021786) #23 RNF181 (ENSLAFG00000021776) #24 TMEM150A (ENSLAFG00000018054) #25 C2orf68 (ENSLAFG00000023236) #26 USP39 (ENSLAFG00000011741) #27 SFTPB (ENSLAFG00000015010) #28 ATOH8 (ENSLAFG00000027790) #29 ST3GAL5 (ENSLAFG00000003639) #30 POLR1A (ENSLAFG00000014948) #31 PTCD3 (ENSLAFG00000014956) #32 IMMT (ENSLAFG00000001316) #33 MRPL35 (ENSLAFG00000001319) #34 REEP1 (ENSLAFG00000001321) #35 ENSLAFG00000026894 #36 ENSLAFG00000009979 #36 Tenrec MODERN SPECIES 13811 VAMP8 (ENSETEG00000003509) #22 Xenarthra ANCESTRAL SPECIES 240 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 Armadillo MODERN SPECIES 344 ENSDNOG00000035009 ENSDNOG00000046253 RETSAT (ENSDNOG00000035880) ELMOD3 (ENSDNOG00000006657) CAPG (ENSDNOG00000019583) MAT2A (ENSDNOG00000033164) #20 GGCX (ENSDNOG00000008326) #21 VAMP8 (ENSDNOG00000044201) #22 VAMP5 (ENSDNOG00000039900) #23 RNF181 (ENSDNOG00000011353) #24 TMEM150A (ENSDNOG00000033208) #25 USP39 (ENSDNOG00000034517) #27 SFTPB (ENSDNOG00000043019) #28 ENSDNOG00000024234 ATOH8 (ENSDNOG00000047321) #29 Marsupialia ANCESTRAL SPECIES 26 ENSGT01030000234543.A.a.kb.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.t ENSGT00390000017613.s ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000176261 ENSGT00940000168353 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Opossum MODERN SPECIES TRABD2A (ENSMODG00000015560) TMSB10 (ENSMODG00000037498) KCMF1 (ENSMODG00000015567) TCF7L1 (ENSMODG00000015573) ENSMODG00000039529 ENSMODG00000042124 ENSMODG00000038085 ENSMODG00000050755 ENSMODG00000023038 ENSMODG00000023037 ENSMODG00000015593 ELMOD3 (ENSMODG00000015595) CAPG (ENSMODG00000015599) MAT2A (ENSMODG00000015604) #20 GGCX (ENSMODG00000015606) #21 VAMP8 (ENSMODG00000015607) #22 ENSMODG00000050911 #23 ENSMODG00000047247 RNF181 (ENSMODG00000015616) #24 TMEM150A (ENSMODG00000015622) #25 ENSMODG00000015624 #26 USP39 (ENSMODG00000015632) #27 ENSMODG00000015643 #28 ENSMODG00000039022 ST3GAL5 (ENSMODG00000009287) #30 POLR1A (ENSMODG00000009335) #31 PTCD3 (ENSMODG00000009372) #32 IMMT (ENSMODG00000009386) #33 MRPL35 (ENSMODG00000009393) #34 REEP1 (ENSMODG00000009402) #35 KDM3A (ENSMODG00000009450) #36 Marsupialia_b ANCESTRAL SPECIES 23 ENSGT00390000010165.i.b.b.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.t ENSGT00390000017613.s ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000176261 ENSGT00940000168353 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000024197 SUCLG1 (ENSSHAG00000004981) DNAH6 (ENSSHAG00000000475) TRABD2A (ENSSHAG00000010584) ENSSHAG00000030238 KCMF1 (ENSSHAG00000009198) TCF7L1 (ENSSHAG00000006659) ENSSHAG00000030894 ENSSHAG00000026447 ENSSHAG00000005344 ENSSHAG00000004885 CAPG (ENSSHAG00000004491) ENSSHAG00000031524 MAT2A (ENSSHAG00000025075) #20 GGCX (ENSSHAG00000023998) #21 ENSSHAG00000032378 #22 VAMP5 (ENSSHAG00000016279) #23 ENSSHAG00000022364 #24 TMEM150A (ENSSHAG00000016184) #25 C2orf68 (ENSSHAG00000024656) #26 USP39 (ENSSHAG00000016049) #27 ENSSHAG00000015982 #28 ATOH8 (ENSSHAG00000020983) #29 ST3GAL5 (ENSSHAG00000029810) #30 POLR1A (ENSSHAG00000014739) #31 PTCD3 (ENSSHAG00000014622) #32 IMMT (ENSSHAG00000014516) #33 REEP1 (ENSSHAG00000031435) #35 KDM3A (ENSSHAG00000013168) #36 CHMP3 (ENSSHAG00000012934) #37 RNF103 (ENSSHAG00000032302) Diprotodontia ANCESTRAL SPECIES 35 ENSGT01030000234543.A.a.kb.a ENSGT00390000010165.i.b.b.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.t ENSGT00390000017613.s ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000176261 ENSGT00940000168353 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Diprotodontia_a ANCESTRAL SPECIES 34 ENSGT01030000234543.A.a.kb.a ENSGT00390000010165.i.b.b.b ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613.t ENSGT00390000017613.s ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000176261 ENSGT00940000168353 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161151 #29 ENSGT00940000157929 #30 ENSGT00920000149138 #31 ENSGT00390000016876 #32 ENSGT00390000002313 #33 ENSGT00390000007547 #34 ENSGT00940000159532 #35 Common wonbat MODERN SPECIES 922 ELMOD3 (ENSVURG00010009166) CAPG (ENSVURG00010009179) MAT2A (ENSVURG00010009192) #20 GGCX (ENSVURG00010009199) #21 VAMP8 (ENSVURG00010009216) #22 VAMP5 (ENSVURG00010009223) #23 ENSVURG00010009228 RNF181 (ENSVURG00010009239) #24 TMEM150A (ENSVURG00010009241) #25 C2orf68 (ENSVURG00010009254) #26 USP39 (ENSVURG00010009267) #27 ENSVURG00010009280 #28 ATOH8 (ENSVURG00010009311) #29 ST3GAL5 (ENSVURG00010009321) #30 POLR1A (ENSVURG00010009333) #31 PTCD3 (ENSVURG00010009360) #32 IMMT (ENSVURG00010009377) #33 MRPL35 (ENSVURG00010009388) #34 REEP1 (ENSVURG00010009406) #35 KDM3A (ENSVURG00010009556) #36 koala MODERN SPECIES 191 ENSPCIG00000009925 TRABD2A (ENSPCIG00000009900) TMSB10 (ENSPCIG00000035096) KCMF1 (ENSPCIG00000009893) TCF7L1 (ENSPCIG00000006486) ENSPCIG00000034125 ENSPCIG00000010251 ENSPCIG00000004280 ENSPCIG00000025073 ENSPCIG00000032043 ELMOD3 (ENSPCIG00000007453) CAPG (ENSPCIG00000007456) ENSPCIG00000009164 MAT2A (ENSPCIG00000004154) #20 GGCX (ENSPCIG00000004155) #21 VAMP8 (ENSPCIG00000031421) #22 VAMP5 (ENSPCIG00000032905) #23 ENSPCIG00000004174 TMEM150A (ENSPCIG00000004183) #25 C2orf68 (ENSPCIG00000004192) #26 USP39 (ENSPCIG00000004196) #27 ENSPCIG00000004203 #28 ATOH8 (ENSPCIG00000004215) #29 ST3GAL5 (ENSPCIG00000032993) #30 POLR1A (ENSPCIG00000004222) #31 ENSPCIG00000004240 #32 IMMT (ENSPCIG00000004284) #33 MRPL35 (ENSPCIG00000004298) #34 REEP1 (ENSPCIG00000004307) #35 KDM3A (ENSPCIG00000004328) #36 CHMP3 (ENSPCIG00000004340) #37 Wallaby MODERN SPECIES 2741 VAMP8 (ENSMEUG00000009700) #22 Platypus MODERN SPECIES 2 ZMIZ2 (ENSOANG00000038549) ENSOANG00000009377 H2AZ2 (ENSOANG00000009378) ENSOANG00000048391 PURB (ENSOANG00000041511) ENSOANG00000040675 SEMA4C (ENSOANG00000000249) ENSOANG00000050667 CNNM3 (ENSOANG00000012493) RETSAT (ENSOANG00000012616) ELMOD3 (ENSOANG00000001113) CAPG (ENSOANG00000001114) ENSOANG00000044668 MAT2A (ENSOANG00000041477) #20 GGCX (ENSOANG00000003061) #21 VAMP8 (ENSOANG00000050900) #22 ENSOANG00000001769 #23 ENSOANG00000040133 TMEM150A (ENSOANG00000001771) #25 ENSOANG00000036633 #26 USP39 (ENSOANG00000008860) #27 ENSOANG00000008859 #28 PAX8 (ENSOANG00000010554) ENSOANG00000010553 IL1RN (ENSOANG00000010552) IL1F10 (ENSOANG00000010551) ENSOANG00000041011 ENSOANG00000041181 ENSOANG00000010549 ENSOANG00000040315 ENSOANG00000010547 Sauria ANCESTRAL SPECIES 27 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Lepidosauria ANCESTRAL SPECIES 20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a tuatara MODERN SPECIES 251 ENSSPUG00000003378 ENSSPUG00000003383 LMAN2L (ENSSPUG00000003392) CNNM4 (ENSSPUG00000003419) CNNM3 (ENSSPUG00000003561) ENSSPUG00000003570 ANKRD39 (ENSSPUG00000003626) COX5B (ENSSPUG00000003660) ACTR1B (ENSSPUG00000003665) ENSSPUG00000003679 ENSSPUG00000003685 H2AZ2 (ENSSPUG00000003712) POLM (ENSSPUG00000003727) ENSSPUG00000003740 MAT2A (ENSSPUG00000003749) #20 VAMP8 (ENSSPUG00000003814) #22 Episquamata ANCESTRAL SPECIES 24 ENSGT00940000165233 ENSGT00940000157488 ENSGT00940000164825 ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000173670 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 Toxicofera ANCESTRAL SPECIES 49 ENSGT00940000165233 ENSGT00940000157488 ENSGT00940000164825 ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000173670 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161674 ENSGT00390000002931 ENSGT00950000182936.a.b.b ENSGT00390000016151 ENSGT00950000182850.a.b.b ENSGT00390000016333 ENSGT00940000153139.B.a ENSGT00940000156168.B Elapidae ANCESTRAL SPECIES 35 ENSGT00390000016151 ENSGT00950000182850.a.b.b ENSGT00390000016333 ENSGT00940000153139.B.a ENSGT00940000156168.B ENSGT00950000182943.kb.a ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000173670 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00940000156185 ENSGT00940000153195.A.ab ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00390000003349 ENSGT00940000158488 Indian cobra MODERN SPECIES 7 FHIP2B (ENSNNAG00000005848) NDUFA10 (ENSNNAG00000005886) DMTN (ENSNNAG00000005920) ENSNNAG00000005961 XPO7 (ENSNNAG00000006001) GFRA2 (ENSNNAG00000006075) ENSNNAG00000006103 ACTG2 (ENSNNAG00000006120) STAMBP (ENSNNAG00000006152) ENSNNAG00000006182 KANSL3 (ENSNNAG00000006221) UFM1 (ENSNNAG00000006300) POLB (ENSNNAG00000006324) DKK4 (ENSNNAG00000006409) GGCX (ENSNNAG00000006440) #21 VAMP8 (ENSNNAG00000006460) #22 PSD4 (ENSNNAG00000006478) ENSNNAG00000006515 TMED4 (ENSNNAG00000006537) DDX56 (ENSNNAG00000006547) NPC1L1 (ENSNNAG00000006586) ENSNNAG00000006627 SLC20A1 (ENSNNAG00000006723) NT5DC4 (ENSNNAG00000007850) ENSNNAG00000008290 TSR1 (ENSNNAG00000008569) ANXA4 (ENSNNAG00000008662) AAK1 (ENSNNAG00000008728) ENSNNAG00000008772 ENSNNAG00000008796 MGME1 (ENSNNAG00000008823) Elapidae_a ANCESTRAL SPECIES 58 ENSGT00390000016151 ENSGT00950000182850.a.b.b ENSGT00390000016333 ENSGT00940000153139.B.a ENSGT00940000156168.B ENSGT00950000182943.kb.a ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000173670 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00940000156185 ENSGT00940000153195.A.ab ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00390000003349 ENSGT00940000158488 Blue-lipped sea krait MODERN SPECIES 3262 REEP4 (ENSLLTG00000005728) FHIP2B (ENSLLTG00000005702) NDUFA10 (ENSLLTG00000005690) DMTN (ENSLLTG00000005664) XPO7 (ENSLLTG00000005630) GFRA2 (ENSLLTG00000005617) ENSLLTG00000005606 ENSLLTG00000005598 STAMBP (ENSLLTG00000005583) DUSP11 (ENSLLTG00000005571) KANSL3 (ENSLLTG00000005487) UFM1 (ENSLLTG00000005451) POLB (ENSLLTG00000005401) DKK4 (ENSLLTG00000005386) GGCX (ENSLLTG00000005351) #21 VAMP8 (ENSLLTG00000005342) #22 PSD4 (ENSLLTG00000005327) ENSLLTG00000005322 TMED4 (ENSLLTG00000005312) DDX56 (ENSLLTG00000005298) NPC1L1 (ENSLLTG00000005201) MRPS24 (ENSLLTG00000005184) SLC20A1 (ENSLLTG00000005170) NT5DC4 (ENSLLTG00000005148) ENSLLTG00000004944 Acanthophiinae ANCESTRAL SPECIES 40 ENSGT00390000016151 ENSGT00950000182850.a.b.b ENSGT00390000016333 ENSGT00940000153139.B.a ENSGT00940000156168.B ENSGT00950000182943.kb.a ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000173670 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00940000156185 ENSGT00940000153195.A.ab ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00390000003349 ENSGT00940000158488 Eastern brown snake MODERN SPECIES 76 NDUFA10 (ENSPTXG00000015687) DMTN (ENSPTXG00000015092) PBDC1 (ENSPTXG00000015088) XPO7 (ENSPTXG00000013490) GFRA2 (ENSPTXG00000013483) ENSPTXG00000013481 ENSPTXG00000013480 STAMBP (ENSPTXG00000013478) ENSPTXG00000013476 ENSPTXG00000013474 UFM1 (ENSPTXG00000013473) POLB (ENSPTXG00000013469) ENSPTXG00000013468 DKK4 (ENSPTXG00000013467) GGCX (ENSPTXG00000013466) #21 VAMP8 (ENSPTXG00000013464) #22 ENSPTXG00000013462 ENSPTXG00000014073 ENSPTXG00000014070 TMED4 (ENSPTXG00000014068) DDX56 (ENSPTXG00000014066) NPC1L1 (ENSPTXG00000014059) MRPS24 (ENSPTXG00000014058) SLC20A1 (ENSPTXG00000014057) NT5DC4 (ENSPTXG00000014056) ENSPTXG00000014055 TSR1 (ENSPTXG00000014054) ANXA4 (ENSPTXG00000014053) AAK1 (ENSPTXG00000014052) NFU1 (ENSPTXG00000014051) MGME1 (ENSPTXG00000014050) Lizard MODERN SPECIES 347 ENSACAG00000042893 #22 Laterata ANCESTRAL SPECIES 44 ENSGT00940000165233 ENSGT00940000157488 ENSGT00940000154863 ENSGT00940000164825 ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000007636 ENSGT00390000010391 ENSGT00940000156918 ENSGT00940000161614 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 Argentine black and white tegu MODERN SPECIES 94 TACR1 (ENSSMRG00000015542) ENSSMRG00000015543 SLC4A5 (ENSSMRG00000015545) ENSSMRG00000015815 BOLA3 (ENSSMRG00000015819) ENSSMRG00000015821 DGUOK (ENSSMRG00000015825) ACTG2 (ENSSMRG00000015827) STAMBP (ENSSMRG00000015828) ENSSMRG00000015833 KANSL3 (ENSSMRG00000015843) UFM1 (ENSSMRG00000016113) POLB (ENSSMRG00000016114) DKK4 (ENSSMRG00000016304) GGCX (ENSSMRG00000016305) #21 VAMP8 (ENSSMRG00000016306) #22 VAMP5 (ENSSMRG00000016307) #23 RNF181 (ENSSMRG00000016308) #24 TMEM150A (ENSSMRG00000016309) #25 C2orf68 (ENSSMRG00000016312) #26 USP39 (ENSSMRG00000016314) #27 ENSSMRG00000016317 #28 REEP4 (ENSSMRG00000016321) NUDT18 (ENSSMRG00000016323) FHIP2B (ENSSMRG00000016325) NDUFA10 (ENSSMRG00000016327) DMTN (ENSSMRG00000016329) ENSSMRG00000016332 XPO7 (ENSSMRG00000016333) ENSSMRG00000016334 GFRA2 (ENSSMRG00000016335) Common wall lizard MODERN SPECIES 16 LGI3 (ENSPMRG00000012224) ENSPMRG00000012221 ENSPMRG00000012220 ENSPMRG00000012217 RASSF2 (ENSPMRG00000012206) SLC23A2 (ENSPMRG00000012189) TMEM230 (ENSPMRG00000012185) ENSPMRG00000012184 ENSPMRG00000012181 CDS2 (ENSPMRG00000012169) ENSPMRG00000012167 ENSPMRG00000012164 BMP10 (ENSPMRG00000012162) GKN2 (ENSPMRG00000012160) GKN1 (ENSPMRG00000012157) VAMP8 (ENSPMRG00000012154) #22 RNF181 (ENSPMRG00000012152) #24 TMEM150A (ENSPMRG00000012146) #25 MXD1 (ENSPMRG00000012129) ENSPMRG00000012116 ENSPMRG00000012109 C2orf42 (ENSPMRG00000012098) TIA1 (ENSPMRG00000012079) PCYOX1 (ENSPMRG00000012072) SNRPG (ENSPMRG00000012069) FAM136A (ENSPMRG00000012065) TGFA (ENSPMRG00000012057) ENSPMRG00000011995 TSR1 (ENSPMRG00000011965) ANXA4 (ENSPMRG00000011958) AAK1 (ENSPMRG00000011899) Archelosauria ANCESTRAL SPECIES 29 ENSGT00940000175342 ENSGT00940000160547 ENSGT00940000159885 ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Archosauria ANCESTRAL SPECIES 38 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00390000004149 ENSGT00940000161253 ENSGT00390000007636 ENSGT00940000155596 ENSGT00940000156317 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00940000158490 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000176261 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Aves ANCESTRAL SPECIES 52 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000161915 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 Neognathae ANCESTRAL SPECIES 38 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000161915 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000011179 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012.ab ENSGT00950000182943.kb.b.a.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00940000161976 ENSGT00940000157856 ENSGT00390000005154.s.a ENSGT00390000005154.t ENSGT00940000158670 ENSGT00940000154966 Neognathae_b ANCESTRAL SPECIES 28 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000161915 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000011179 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012.ab ENSGT00950000182943.kb.b.a.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00940000161976 ENSGT00940000157856 ENSGT00390000005154.s.a ENSGT00390000005154.t ENSGT00940000158670 Passeriformes ANCESTRAL SPECIES 26 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 ENSGT00950000182787.C ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000008255 ENSGT00910000146792 ENSGT00390000011296 ENSGT00940000158488 Passeriformes_d ANCESTRAL SPECIES 30 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 ENSGT00950000182787.C ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000008255 ENSGT00910000146792 ENSGT00390000011296 ENSGT00940000158488 Passeriformes_g ANCESTRAL SPECIES 38 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 ENSGT00950000182787.C ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 Passeroidea ANCESTRAL SPECIES 31 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 ENSGT00950000182787.C ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 Zebra finch MODERN SPECIES 15 YKT6 (ENSTGUG00000021816) ENSTGUG00000019411 POLD2 (ENSTGUG00000003553) DBNL (ENSTGUG00000003620) TCF7L1 (ENSTGUG00000019696) ENSTGUG00000029624 RETSAT (ENSTGUG00000003630) ELMOD3 (ENSTGUG00000003650) GPAT2 (ENSTGUG00000003661) FAHD2A (ENSTGUG00000013905) KCNIP3 (ENSTGUG00000028877) COX5B (ENSTGUG00000029234) PURB (ENSTGUG00000023488) H2AFV (ENSTGUG00000015225) GGCX (ENSTGUG00000025041) #21 VAMP8 (ENSTGUG00000020301) #22 ENSTGUG00000028257 ENSTGUG00000028918 #26 USP39 (ENSTGUG00000027559) #27 ENSTGUG00000028338 MXD1 (ENSTGUG00000027663) SNRNP27 (ENSTGUG00000003664) ADD2 (ENSTGUG00000003669) ENSTGUG00000026952 HK2 (ENSTGUG00000019594) ENSTGUG00000003691 ANXA4 (ENSTGUG00000003734) AAK1 (ENSTGUG00000003831) ENSTGUG00000003859 NFU1 (ENSTGUG00000003860) GFPT1 (ENSTGUG00000003894) Great tit MODERN SPECIES 14 ENSPMJG00000015572 POLD2 (ENSPMJG00000015573) AEBP1 (ENSPMJG00000015574) DBNL (ENSPMJG00000015575) TCF7L1 (ENSPMJG00000015576) ENSPMJG00000015578 RETSAT (ENSPMJG00000015580) ELMOD3 (ENSPMJG00000015581) GPAT2 (ENSPMJG00000015583) ENSPMJG00000015584 KCNIP3 (ENSPMJG00000015585) COX5B (ENSPMJG00000015586) H2AZ2 (ENSPMJG00000015588) MAT2A (ENSPMJG00000015589) #20 GGCX (ENSPMJG00000015590) #21 VAMP8 (ENSPMJG00000015591) #22 USP39 (ENSPMJG00000015593) #27 MXD1 (ENSPMJG00000015594) ENSPMJG00000015595 ADD2 (ENSPMJG00000015596) ENSPMJG00000015597 HK2 (ENSPMJG00000015598) ENSPMJG00000015599 ANXA4 (ENSPMJG00000015600) AAK1 (ENSPMJG00000015601) ENSPMJG00000015602 NFU1 (ENSPMJG00000015603) GFPT1 (ENSPMJG00000015604) ANTXR1 (ENSPMJG00000015634) GKN1 (ENSPMJG00000015636) ENSPMJG00000015637 Neognathae_c ANCESTRAL SPECIES 30 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000161915 ENSGT00520000055570.A.b ENSGT00940000160571 ENSGT00940000158782 ENSGT00390000011010.b ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT01060000250637 ENSGT00390000001901 #26 ENSGT00960000190613 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00390000011179 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012.ab ENSGT00950000182943.kb.b.a.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00940000161976 ENSGT00940000157856 ENSGT00390000005154.t ENSGT00940000158670 Golden eagle MODERN SPECIES 4 ENSACCG00020006749 TCF7L1 (ENSACCG00020006717) ENSACCG00020006691 ENSACCG00020006673 RETSAT (ENSACCG00020006645) ELMOD3 (ENSACCG00020006624) ADRA2B (ENSACCG00020006580) ENSACCG00020006554 FAHD2A (ENSACCG00020006530) KCNIP3 (ENSACCG00020006498) COX5B (ENSACCG00020006472) PURB (ENSACCG00020006459) ENSACCG00020006445 MAT2A (ENSACCG00020006428) #20 GGCX (ENSACCG00020006379) #21 VAMP8 (ENSACCG00020006345) #22 ENSACCG00020006339 USP39 (ENSACCG00020006319) #27 ENSACCG00020006302 #28 ENSACCG00020006291 MXD1 (ENSACCG00020006281) SNRNP27 (ENSACCG00020006263) ADD2 (ENSACCG00020006241) ENSACCG00020006224 HK2 (ENSACCG00020006207) ENSACCG00020006166 ANXA4 (ENSACCG00020006129) AAK1 (ENSACCG00020006102) ENSACCG00020006059 NFU1 (ENSACCG00020006044) GFPT1 (ENSACCG00020005993) Galloanserae ANCESTRAL SPECIES ENSGT00940000160325.b #22 Anatidae ANCESTRAL SPECIES ENSGT00940000160325.b #22 Duck MODERN SPECIES 367 VAMP8 (ENSAPLG00000017747) #22 Australian saltwater crocodile MODERN SPECIES 51 ANK1 (ENSCPRG00005000592) KAT6A (ENSCPRG00005000585) AP3M2 (ENSCPRG00005000578) PLAT (ENSCPRG00005000562) IKBKB (ENSCPRG00005000500) DKK4 (ENSCPRG00005000482) VDAC3 (ENSCPRG00005000463) POLB (ENSCPRG00005000434) SEMA4C (ENSCPRG00005000404) PURB (ENSCPRG00005000388) H2AZ2 (ENSCPRG00005000382) ENSCPRG00005000376 POLM (ENSCPRG00005000370) MAT2A (ENSCPRG00005000252) #20 GGCX (ENSCPRG00005000222) #21 VAMP8 (ENSCPRG00005000205) #22 VAMP5 (ENSCPRG00005000186) #23 TMEM150A (ENSCPRG00005000180) #25 ENSCPRG00005000164 C2orf68 (ENSCPRG00005000155) #26 USP39 (ENSCPRG00005000146) #27 ENSCPRG00005000142 PAX8 (ENSCPRG00005000129) PSD4 (ENSCPRG00005000116) ENSCPRG00005000111 ARID5A (ENSCPRG00005000102) KANSL3 (ENSCPRG00005000078) ENSCPRG00005000053 ENSCPRG00005000051 LMAN2L (ENSCPRG00005000049) CNNM4 (ENSCPRG00005000048) Cryptodira ANCESTRAL SPECIES 30 ENSGT00940000175342 ENSGT00940000160547 ENSGT00940000159885 ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Testudinoidea ANCESTRAL SPECIES ENSGT00940000175342 ENSGT00940000160547 ENSGT00940000159885 ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.j #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Testudinidae ANCESTRAL SPECIES 55 ENSGT00940000175342 ENSGT00940000160547 ENSGT00940000159885 ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.j #27 ENSGT00940000161711 #28 ENSGT00610000087417.b ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005001770 ANKRD39 (ENSGEVG00005001751) SEMA4C (ENSGEVG00005001730) COX5B (ENSGEVG00005001707) ACTR1B (ENSGEVG00005001617) ENSGEVG00005001598 ENSGEVG00005001583 PURB (ENSGEVG00005001570) H2AZ2 (ENSGEVG00005001553) ENSGEVG00005001539 POLM (ENSGEVG00005001484) ENSGEVG00005001433 MAT2A (ENSGEVG00005001405) #20 GGCX (ENSGEVG00005001392) #21 ENSGEVG00005001383 VAMP8 (ENSGEVG00005001371) #22 VAMP5 (ENSGEVG00005001359) #23 RNF181 (ENSGEVG00005001346) #24 TMEM150A (ENSGEVG00005001337) #25 C2orf68 (ENSGEVG00005001327) #26 USP39 (ENSGEVG00005001305) #27 SFTPB (ENSGEVG00005001278) #28 ENSGEVG00005001267 ENSGEVG00005001256 PAX8 (ENSGEVG00005001218) PSD4 (ENSGEVG00005001176) IL36RN (ENSGEVG00005001146) ENSGEVG00005001125 TMED4 (ENSGEVG00005001113) DDX56 (ENSGEVG00005001091) NPC1L1 (ENSGEVG00005001011) Abingdon island giant tortoise MODERN SPECIES 1500 CNNM3 (ENSCABG00000012075) ENSCABG00000012076 ANKRD39 (ENSCABG00000012077) SEMA4C (ENSCABG00000012078) COX5B (ENSCABG00000012079) ACTR1B (ENSCABG00000012080) ENSCABG00000012171 ENSCABG00000012172 ENSCABG00000012174 ENSCABG00000012175 POLM (ENSCABG00000012176) ENSCABG00000012177 ENSCABG00000012178 MAT2A (ENSCABG00000012179) #20 GGCX (ENSCABG00000012180) #21 VAMP8 (ENSCABG00000012184) #22 RNF181 (ENSCABG00000012185) #24 TMEM150A (ENSCABG00000012187) #25 C2orf68 (ENSCABG00000012211) #26 USP39 (ENSCABG00000012212) #27 SFTPB (ENSCABG00000012215) #28 ENSCABG00000012216 PAX8 (ENSCABG00000012219) PSD4 (ENSCABG00000012224) IL36RN (ENSCABG00000012226) ENSCABG00000012232 TMED4 (ENSCABG00000012313) DDX56 (ENSCABG00000012315) NPC1L1 (ENSCABG00000012319) MRPS24 (ENSCABG00000012408) SLC20A1 (ENSCABG00000012411) Emydidae ANCESTRAL SPECIES ENSGT00940000161102 ENSGT00940000175342 ENSGT00940000160547 ENSGT00940000159885 ENSGT00390000011010.b ENSGT00940000161587 ENSGT00390000009948.d ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992.j #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 17 ENSTMTG00000000892 ENSTMTG00000000879 ENSTMTG00000000853 ENSTMTG00000000838 ENSTMTG00000000818 ENSTMTG00000000808 ENSTMTG00000000796 ENSTMTG00000000788 ENSTMTG00000000775 ENSTMTG00000000767 ENSTMTG00000000686 ENSTMTG00000000626 ENSTMTG00000000613 ENSTMTG00000000585 #20 ENSTMTG00000000568 #21 ENSTMTG00000000554 #22 ENSTMTG00000000538 #23 ENSTMTG00000000453 ENSTMTG00000000440 #25 ENSTMTG00000000419 #26 ENSTMTG00000000400 #27 ENSTMTG00000000379 #28 ENSTMTG00000000294 ENSTMTG00000000239 ENSTMTG00000000194 ENSTMTG00000000156 ENSTMTG00000000139 ENSTMTG00000000120 ENSTMTG00000000101 ENSTMTG00000000065 ENSTMTG00000014939 Three-toed box turtle MODERN SPECIES 18 ENSTMTG00000003819 ENSTMTG00000003800 ENSTMTG00000003569 ENSTMTG00000003521 ENSTMTG00000003485 ENSTMTG00000003451 ENSTMTG00000003433 ENSTMTG00000003420 H2AZ2 (ENSTMTG00000003395) ENSTMTG00000003373 ENSTMTG00000003188 ENSTMTG00000003150 ENSTMTG00000003135 ENSTMTG00000003123 #20 ENSTMTG00000003103 #21 ENSTMTG00000003097 #22 ENSTMTG00000003088 #23 RNF181 (ENSTMTG00000003075) #24 ENSTMTG00000003064 #25 ENSTMTG00000003052 #26 ENSTMTG00000003042 #27 ENSTMTG00000003023 #28 ENSTMTG00000002983 ENSTMTG00000002971 ENSTMTG00000002968 ENSTMTG00000002962 ENSTMTG00000002958 ENSTMTG00000002948 ENSTMTG00000002943 ENSTMTG00000002931 ENSTMTG00000002905 painted turtle MODERN SPECIES 877 ENSCPBG00000023212 ANKRD39 (ENSCPBG00000023213) SEMA4C (ENSCPBG00000023214) COX5B (ENSCPBG00000023216) ACTR1B (ENSCPBG00000023217) ENSCPBG00000023218 ENSCPBG00000023219 PURB (ENSCPBG00000023221) H2AZ2 (ENSCPBG00000023223) ENSCPBG00000023224 POLM (ENSCPBG00000023227) ENSCPBG00000023230 ENSCPBG00000023231 MAT2A (ENSCPBG00000023233) #20 GGCX (ENSCPBG00000023234) #21 VAMP8 (ENSCPBG00000023235) #22 VAMP5 (ENSCPBG00000023236) #23 RNF181 (ENSCPBG00000023237) #24 TMEM150A (ENSCPBG00000023238) #25 C2orf68 (ENSCPBG00000023240) #26 ENSCPBG00000023241 USP39 (ENSCPBG00000023242) #27 SFTPB (ENSCPBG00000023243) #28 ENSCPBG00000023244 ENSCPBG00000023245 PAX8 (ENSCPBG00000023246) PSD4 (ENSCPBG00000023247) IL36RN (ENSCPBG00000023248) ENSCPBG00000023249 ENSCPBG00000023250 ENSCPBG00000023252 Chinese turtle MODERN SPECIES 1660 MAT2A (ENSPSIG00000013880) #20 VAMP8 (ENSPSIG00000013379) #22 ENSPSIG00000012775 VAMP5 (ENSPSIG00000012528) #23 TMEM150A (ENSPSIG00000011552) #25 GGCX (ENSPSIG00000006744) #21 USP39 (ENSPSIG00000006259) #27 Anura ANCESTRAL SPECIES 30 ENSGT00940000156696.C ENSGT00390000007636 ENSGT00940000155596 ENSGT00940000156317 ENSGT00940000161102 ENSGT00940000160547.g ENSGT00940000159885 ENSGT00390000011010.a.a ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000158490 ENSGT00940000162822 ENSGT00950000183185.c.a.a #20 ENSGT00390000014909 #21 ENSGT00940000160325.b #22 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00390000001901 #26 ENSGT00390000007992 #27 ENSGT00940000161711 #28 ENSGT00940000161868 ENSGT00940000155061.b ENSGT00950000182943 ENSGT01070000257222 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000158973.b ENSGT00940000158444 Leishan spiny toad MODERN SPECIES 6 CNNM4 (ENSLLEG00000010368) ANKRD39 (ENSLLEG00000004294) SEMA4C (ENSLLEG00000004317) ENSLLEG00000004335 ENSLLEG00000004345 COX5B (ENSLLEG00000004367) ENSLLEG00000004384 PURB (ENSLLEG00000004391) ENSLLEG00000004411 ENSLLEG00000004425 H2AZ2 (ENSLLEG00000004452) ENSLLEG00000004486 ENSLLEG00000004521 GGCX (ENSLLEG00000004549) #21 MAT2A (ENSLLEG00000004628) #20 VAMP8 (ENSLLEG00000004650) #22 ENSLLEG00000004663 ENSLLEG00000004671 ENSLLEG00000004685 RNF181 (ENSLLEG00000004704) #24 TMEM150A (ENSLLEG00000004725) #25 C2orf68 (ENSLLEG00000004733) #26 USP39 (ENSLLEG00000004769) #27 ENSLLEG00000004871 #28 PAX8 (ENSLLEG00000004912) ENSLLEG00000004966 ENSLLEG00000005004 ENSLLEG00000005060 ENSLLEG00000005078 ENSLLEG00000005103 ENSLLEG00000005133 Coelacanth MODERN SPECIES 465 ANKRD39 (ENSLACG00000015682) ENSLACG00000015620 ENSLACG00000014799 ENSLACG00000014625 LMAN2L (ENSLACG00000014419) ARID5A (ENSLACG00000014124) ENSLACG00000013204 ENSLACG00000012999 PURB (ENSLACG00000012910) H2AZ2 (ENSLACG00000012013) ENSLACG00000011385 ENSLACG00000008101 ENSLACG00000006982 MAT2A (ENSLACG00000005249) #20 GGCX (ENSLACG00000004481) #21 VAMP8 (ENSLACG00000002927) #22 VAMP5 (ENSLACG00000001781) #23 RNF181 (ENSLACG00000000035) #24 Actinopterygii ANCESTRAL SPECIES 637 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 Neopterygii ANCESTRAL SPECIES 301 ENSGT00940000159627 ENSGT01050000244898.b.a ENSGT00940000164825 ENSGT00940000157488 ENSGT00940000165233 ENSGT00940000153745.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 Osteoglossocephalai ANCESTRAL SPECIES 94 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000008457 ENSGT00940000156006 ENSGT00510000050587 ENSGT00980000198836 ENSGT00390000013484 ENSGT00520000055626.a ENSGT00940000170695 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00940000154962.A.a.b ENSGT00390000011031 ENSGT00390000014618.b.c ENSGT00940000156980.a ENSGT00940000154938 ENSGT00390000011084 ENSGT00940000166580 ENSGT00940000157199 ENSGT00940000159206.a ENSGT00390000014940 ENSGT00940000175893 ENSGT00940000157703 Osteoglossiformes ANCESTRAL SPECIES 19 ENSGT00940000161102 ENSGT00940000156317.u ENSGT00940000165720.n ENSGT00940000156317.v ENSGT00940000165720.m ENSGT00940000159671 ENSGT00390000018806 ENSGT00950000183012.A.a.c.a ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT00390000014618.b.c.b ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.g ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299.e ENSGT00440000033552 ENSGT00950000182787.E.d.e.a ENSGT00950000182787.C Asian bonytongue MODERN SPECIES 3 purbb (ENSSFOG00015019081) ENSSFOG00015019072 ENSSFOG00015019055 CNNM4 (ENSSFOG00015019006) sec14l8 (ENSSFOG00015018945) ENSSFOG00015018920 ascc2 (ENSSFOG00015018793) VPS37B (ENSSFOG00015018771) abcb9 (ENSSFOG00015018745) zgc:113436 (ENSSFOG00015018735) ogfod2 (ENSSFOG00015018724) SLC4A5 (ENSSFOG00015018671) zgc:110329 (ENSSFOG00015018642) tacr1b (ENSSFOG00015018625) ncaph (ENSSFOG00015018594) vamp8 (ENSSFOG00015018572) #22 vamp5 (ENSSFOG00015018554) #23 rnf181 (ENSSFOG00015018536) #24 ENSSFOG00015018496 ZNF703 (ENSSFOG00015024739) ERLIN2 (ENSSFOG00015024388) ENSSFOG00015029181 bmp10 (ENSSFOG00015029317) arhgap25 (ENSSFOG00015018394) cds2 (ENSSFOG00015030400) zgc:65851 (ENSSFOG00015018334) MXD1 (ENSSFOG00015018325) snrnp27 (ENSSFOG00015018311) add2 (ENSSFOG00015018266) figla (ENSSFOG00015018250) hk2 (ENSSFOG00015018184) P. kingsleyae MODERN SPECIES 180 SNX18 (ENSPKIG00000020141) ckap2l (ENSPKIG00000020166) ENSPKIG00000020193 CNNM4 (ENSPKIG00000020220) sec14l8 (ENSPKIG00000020261) ENSPKIG00000020305 ascc2 (ENSPKIG00000020354) VPS37B (ENSPKIG00000020384) abcb9 (ENSPKIG00000020401) zgc:113436 (ENSPKIG00000020423) ogfod2 (ENSPKIG00000020443) SLC4A5 (ENSPKIG00000020466) zgc:110329 (ENSPKIG00000020507) TACR1 (ENSPKIG00000020545) ncaph (ENSPKIG00000020634) vamp8 (ENSPKIG00000020667) #22 ENSPKIG00000020680 vamp5 (ENSPKIG00000020690) #23 rnf181 (ENSPKIG00000020712) #24 ENSPKIG00000020731 ENSPKIG00000020750 ZNF703 (ENSPKIG00000020766) ENSPKIG00000020787 ENSPKIG00000020799 Clupeocephala ANCESTRAL SPECIES 29 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00940000154962.A.a.b ENSGT00940000168407 ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 Otomorpha ANCESTRAL SPECIES 97 ENSGT00940000155596.q ENSGT00940000158066.o ENSGT00730000111181 ENSGT00940000160760.b ENSGT00950000182815.a.a.b.h ENSGT00940000165531.b.a ENSGT00950000183197.b.a.a ENSGT00940000155874.a ENSGT00940000175215.a.b ENSGT00390000003458 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00940000168407 ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 Otophysi ANCESTRAL SPECIES 94 ENSGT00940000158066.o ENSGT00730000111181 ENSGT00940000160760.b ENSGT00950000182815.a.a.b.h ENSGT00940000165531.b.a ENSGT00950000183197.b.a.a ENSGT00950000183089.c.b ENSGT00940000155874.a ENSGT00940000175215.a.b ENSGT00390000003458 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00390000012733 ENSGT00940000157027.n.a ENSGT01030000234598.b.b ENSGT00940000159086 ENSGT00490000043395 ENSGT00730000110989.c.b ENSGT00940000155771.d ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000166823 ENSGT00530000063681.b.a ENSGT00390000012355.A.a.a.a Characiphysae ANCESTRAL SPECIES 95 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00390000012733 ENSGT00940000157027.n.a ENSGT01030000234598.b.b ENSGT00940000159086 ENSGT00490000043395 ENSGT00730000110989.c.b ENSGT00940000155771.d ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000166823 ENSGT00530000063681.b.a ENSGT00390000012355.A.a.a.a Channel catfish MODERN SPECIES 14 sfrp1 (ENSIPUG00000022229) zmat4 (ENSIPUG00000022248) c22h8orf4 (ENSIPUG00000022272) ENSIPUG00000022280 ENSIPUG00000022291 ADAM28 (ENSIPUG00000022305) PPP3CC (ENSIPUG00000022327) vps37b (ENSIPUG00000022362) abcb9 (ENSIPUG00000022367) ogfod2 (ENSIPUG00000022383) zgc:113436 (ENSIPUG00000022404) SLC4A5 (ENSIPUG00000022418) zgc:110329 (ENSIPUG00000022433) TACR1 (ENSIPUG00000022448) ncaph (ENSIPUG00000022452) vamp8 (ENSIPUG00000022474) #22 vamp5 (ENSIPUG00000022496) #23 ENSIPUG00000022505 rnf181 (ENSIPUG00000022518) tmem150aa (ENSIPUG00000022536) #25 tango2 (ENSIPUG00000022551) arvcfb (ENSIPUG00000022615) naaladl1 (ENSIPUG00000022654) erap1b (ENSIPUG00000022668) ENSIPUG00000022680 naaladl1 (ENSIPUG00000022682) erap1b (ENSIPUG00000022714) gtf2h2 (ENSIPUG00000022729) ocln (ENSIPUG00000022759) marveld2b (ENSIPUG00000022768) ak6 (ENSIPUG00000022773) Characiphysae_b ANCESTRAL SPECIES 112 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00390000012733 ENSGT00940000157027.n.a ENSGT01030000234598.b.b ENSGT00940000159086 ENSGT00490000043395 ENSGT00730000110989.c.b ENSGT00940000155771.d ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000166823 ENSGT00530000063681.b.a ENSGT00390000012355.A.a.a.a Characoidei ANCESTRAL SPECIES 108 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00390000012733 ENSGT00940000157027.n.a ENSGT01030000234598.b.b ENSGT00940000159086 ENSGT00490000043395 ENSGT00730000110989.c.b ENSGT00940000155771.d ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000166823 ENSGT00530000063681.b.a ENSGT00390000012355.A.a.a.a Red-bellied piranha MODERN SPECIES 159 vps37ba (ENSPNAG00000023027) abcb9 (ENSPNAG00000023034) zgc:113436 (ENSPNAG00000023049) ogfod2 (ENSPNAG00000003755) SLC4A5 (ENSPNAG00000023167) zgc:110329 (ENSPNAG00000023182) TACR1 (ENSPNAG00000023215) ncaph (ENSPNAG00000023230) vamp8 (ENSPNAG00000023240) #22 vamp5 (ENSPNAG00000023252) #23 rnf181 (ENSPNAG00000023270) #24 XCR1 (ENSPNAG00000023276) XCR1 (ENSPNAG00000023298) tmem150aa (ENSPNAG00000023331) #25 ENSPNAG00000023351 tango2 (ENSPNAG00000023391) arvcfb (ENSPNAG00000023452) naaladl1 (ENSPNAG00000023471) erap1b (ENSPNAG00000023523) erap1b (ENSPNAG00000023599) erap1b (ENSPNAG00000023675) gtf2h2 (ENSPNAG00000023738) oclnb (ENSPNAG00000003781) marveld2b (ENSPNAG00000023789) Mexicana tetra MODERN SPECIES 80 loxl2b (ENSAMXG00000024252) sfrp1a (ENSAMXG00000031312) ZMAT4 (ENSAMXG00000035337) tcima (ENSAMXG00000026349) adam28 (ENSAMXG00000014073) ppp3cca (ENSAMXG00000041596) vps37ba (ENSAMXG00000034807) abcb9 (ENSAMXG00000013961) zgc:113436 (ENSAMXG00000043286) ogfod2 (ENSAMXG00000043732) SLC4A5 (ENSAMXG00000001672) zgc:110329 (ENSAMXG00000042059) ENSAMXG00000036604 TACR1 (ENSAMXG00000030275) ncaph (ENSAMXG00000001661) vamp8 (ENSAMXG00000001657) #22 vamp5 (ENSAMXG00000037732) #23 rnf181 (ENSAMXG00000001639) #24 tmem150aa (ENSAMXG00000001612) #25 ENSAMXG00000031554 tango2 (ENSAMXG00000031133) ENSAMXG00000034908 Electric eel MODERN SPECIES 749 ppp3cca (ENSEEEG00000014577) vps37ba (ENSEEEG00000014575) abcb9 (ENSEEEG00000014574) zgc:113436 (ENSEEEG00000014573) ogfod2 (ENSEEEG00000014572) SLC4A5 (ENSEEEG00000014569) zgc:110329 (ENSEEEG00000014566) TACR1 (ENSEEEG00000014535) ncaph (ENSEEEG00000014525) vamp8 (ENSEEEG00000014522) #22 Cyprinoidei ANCESTRAL SPECIES 19 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000154642.d ENSGT00950000182966.A.a.a ENSGT00390000000459.c ENSGT00940000164721.a ENSGT00940000164876.a ENSGT00940000155188.B.b ENSGT00940000156621.e.a ENSGT00530000063869.B ENSGT00940000164899 ENSGT00440000038604.j ENSGT00940000154149.a.b ENSGT00940000155127.a.b ENSGT00950000183002.B.a.a ENSGT00530000063843.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000159875.e.a ENSGT00940000156888.c.a.b ENSGT00390000003458.m.b ENSGT00940000156716.gb ENSGT00940000166302.b ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a.a ENSGT00940000164419.b.a ENSGT00940000153974.B.d ENSGT00940000164419.b.b ENSGT00940000153974.B.c ENSGT00940000157488.g.d ENSGT00940000165233.b ENSGT00940000153745.a.a.b ENSGT00390000004149.n ENSGT00940000160325.b.k #22 ENSGT00730000111371.k #23 ENSGT00950000182966.A.a.a.d ENSGT00390000000459.c.a ENSGT00940000164721.a.a ENSGT00940000164876.a.d ENSGT00940000155188.B.b.g ENSGT00940000156621.e.a.b ENSGT00530000063869.B.j ENSGT00940000164899.eb ENSGT00940000164899.db.b ENSGT00440000038604.j.b ENSGT00940000154149.a.b.a ENSGT00940000155127.a.b.a ENSGT00950000183002.B.a.a.a.b ENSGT00530000063843.a.c Cyprininae_a ANCESTRAL SPECIES ENSGT00940000159875.e.a ENSGT00940000156888.c.a.b ENSGT00390000003458.m.b ENSGT00940000156716.gb ENSGT00940000166302.b ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a.a ENSGT00940000164419.b.a ENSGT00940000153974.B.d ENSGT00940000164419.b.b ENSGT00940000153974.B.c ENSGT00940000157488.g.d ENSGT00940000165233.b ENSGT00940000153745.a.a.b ENSGT00390000004149.n ENSGT00940000160325.b.k #22 ENSGT00730000111371.k #23 ENSGT00950000182966.A.a.a.d ENSGT00390000000459.c.a ENSGT00940000164721.a.a ENSGT00940000164876.a.d ENSGT00940000155188.B.b.g ENSGT00940000156621.e.a.b ENSGT00530000063869.B.j ENSGT00940000164899.eb ENSGT00940000164899.db.b ENSGT00440000038604.j.b ENSGT00940000154149.a.b.a ENSGT00940000155127.a.b.a ENSGT00950000183002.B.a.a.a.b ENSGT00530000063843.a.c Golden-line barbel MODERN SPECIES 91 sfrp1a (ENSSGRG00000000527) ZMAT4 (ENSSGRG00000000529) tcima (ENSSGRG00000000531) adam28 (ENSSGRG00000000533) ENSSGRG00000000537 ppp3cca (ENSSGRG00000000543) vps37ba (ENSSGRG00000000728) ENSSGRG00000000729 abcb9 (ENSSGRG00000000731) zgc:113436 (ENSSGRG00000000732) ogfod2 (ENSSGRG00000000733) SLC4A5 (ENSSGRG00000000742) zgc:110329 (ENSSGRG00000000985) ENSSGRG00000000987 ncaph (ENSSGRG00000000988) vamp8 (ENSSGRG00000000991) #22 vamp5 (ENSSGRG00000000992) #23 ENSSGRG00000000993 nsmfb (ENSSGRG00000000994) ENSSGRG00000000996 ENSSGRG00000001052 tncb (ENSSGRG00000001053) TRAF2 (ENSSGRG00000001080) trafd1 (ENSSGRG00000001084) ENSSGRG00000001086 niban2b (ENSSGRG00000001090) stxbp1b (ENSSGRG00000001506) ENSSGRG00000008539 noxa1 (ENSSGRG00000008541) dpp7 (ENSSGRG00000008546) man1b1b (ENSSGRG00000008628) Goldfish MODERN SPECIES 916 tcima (ENSCARG00000053681) adam28 (ENSCARG00000053704) ENSCARG00000054328 ppp3cca (ENSCARG00000054370) vps37ba (ENSCARG00000055342) zgc:113436 (ENSCARG00000055351) ogfod2 (ENSCARG00000055363) SLC4A5 (ENSCARG00000055494) zgc:110329 (ENSCARG00000056721) TACR1 (ENSCARG00000056741) vamp8 (ENSCARG00000056771) #22 Cyprininae ANCESTRAL SPECIES 659 ENSGT00940000157488.g.c ENSGT00940000165233.a ENSGT00940000153745.a.a.a ENSGT00390000004149.m ENSGT00940000160325.b.l #22 ENSGT00730000111371.l #23 ENSGT00940000154642.d.b ENSGT00390000000459.c.b ENSGT00940000164721.a.b ENSGT00940000164876.a.c ENSGT00940000155188.B.b.h ENSGT00950000182966.A.a.a.c ENSGT00940000156621.e.a.a ENSGT00530000063869.B.i Goldfish MODERN SPECIES 23 ENSCARG00000052354 pafah1b2 (ENSCARG00000052325) apoa1a (ENSCARG00000052309) ENSCARG00000052283 si:dkey-111e8.4 (ENSCARG00000052266) ENSCARG00000032046 si:ch211-284e13.5 (ENSCARG00000032039) cox7c (ENSCARG00000032025) RASA1 (ENSCARG00000030140) ccnh (ENSCARG00000030015) tmem161b (ENSCARG00000029726) mef2cb (ENSCARG00000029454) zgc:110329 (ENSCARG00000029405) TACR1 (ENSCARG00000029379) ncaph (ENSCARG00000029242) vamp8 (ENSCARG00000029200) #22 vamp5 (ENSCARG00000029186) #23 DNAH10 (ENSCARG00000027955) ENSCARG00000027870 nsmfb (ENSCARG00000026834) ENSCARG00000026799 ENSCARG00000026757 ENSCARG00000026738 tncb (ENSCARG00000022468) ENSCARG00000022326 TRAF2 (ENSCARG00000022241) trafd1 (ENSCARG00000022201) ENSCARG00000022189 CMKLR1 (ENSCARG00000022181) CMKLR1 (ENSCARG00000022175) ENSCARG00000022167 Cyprininae_a ANCESTRAL SPECIES 22 ENSGT00940000157488.g.c ENSGT00940000165233.a ENSGT00940000153745.a.a.a ENSGT00390000004149.m ENSGT00940000160325.b.l #22 ENSGT00730000111371.l #23 ENSGT00940000154642.d.b ENSGT00390000000459.c.b ENSGT00940000164721.a.b ENSGT00940000164876.a.c ENSGT00940000155188.B.b.h ENSGT00950000182966.A.a.a.c ENSGT00940000156621.e.a.a ENSGT00530000063869.B.i ENSGT00940000164899.db.a.a ENSGT00440000038604.j.a ENSGT00940000154149.a.b.b ENSGT00940000155127.a.b.b ENSGT00950000183002.B.a.a.a.a ENSGT00530000063843.a.d Common carp reference MODERN SPECIES 15 histh1l1 (ENSCCRG00000067427) loxl2b (ENSCCRG00000017755) sfrp1a (ENSCCRG00000000546) ENSCCRG00000080719 tcima (ENSCCRG00000053288) adam28 (ENSCCRG00000006572) ppp3cca (ENSCCRG00000065565) vps37ba (ENSCCRG00000067031) abcb9 (ENSCCRG00000076108) zgc:113436 (ENSCCRG00000023013) ENSCCRG00000075438 ENSCCRG00000082083 zgc:110329 (ENSCCRG00000063030) ENSCCRG00000061022 ncaph (ENSCCRG00000022965) vamp8 (ENSCCRG00000076755) #22 vamp5 (ENSCCRG00000074847) #23 ENSCCRG00000015695 nsmfb (ENSCCRG00000017135) ENSCCRG00000030404 ENSCCRG00000058115 tncb (ENSCCRG00000029378) ENSCCRG00000052136 ENSCCRG00000052115 trafd1 (ENSCCRG00000060580) ENSCCRG00000052132 ENSCCRG00000065795 niban2b (ENSCCRG00000052126) stxbp1b (ENSCCRG00000079228) ENSCCRG00000046500 noxa1 (ENSCCRG00000046479) Golden-line barbel MODERN SPECIES 194 histh1l1 (ENSSGRG00000013989) drd7 (ENSSGRG00000013988) loxl2b (ENSSGRG00000013846) sfrp1a (ENSSGRG00000013844) ZMAT4 (ENSSGRG00000013843) tcima (ENSSGRG00000013842) adam28 (ENSSGRG00000010108) ppp3cca (ENSSGRG00000009997) ENSSGRG00000009994 abcb9 (ENSSGRG00000009993) zgc:113436 (ENSSGRG00000009991) ogfod2 (ENSSGRG00000009989) zgc:110329 (ENSSGRG00000009986) TACR1 (ENSSGRG00000009979) ncaph (ENSSGRG00000009978) vamp8 (ENSSGRG00000009977) #22 ENSSGRG00000009976 Zebrafish MODERN SPECIES 20 loxl2b (ENSDARG00000044074) drd7 (ENSDARG00000056284) sfrp1a (ENSDARG00000035521) ZMAT4 (ENSDARG00000092987) tcima (ENSDARG00000079497) adam28 (ENSDARG00000035514) ppp3cca (ENSDARG00000014962) vps37ba (ENSDARG00000039319) abcb9 (ENSDARG00000056200) zgc:113436 (ENSDARG00000056204) ogfod2 (ENSDARG00000056211) SLC4A5 (ENSDARG00000002771) zgc:110329 (ENSDARG00000035532) tacr1a (ENSDARG00000035533) ncaph (ENSDARG00000061468) vamp8 (ENSDARG00000024116) #22 vamp5 (ENSDARG00000068262) #23 DNAH10 (ENSDARG00000061486) nsmfb (ENSDARG00000101234) nfr (ENSDARG00000114540) ENSDARG00000097795 tncb (ENSDARG00000021948) TRAF2 (ENSDARG00000030173) trafd1 (ENSDARG00000075123) ENSDARG00000077960 serpina7 (ENSDARG00000087143) zgc:174259 (ENSDARG00000091136) ENSDARG00000074712 ENSDARG00000056156 niban2b (ENSDARG00000008026) stxbp1b (ENSDARG00000056036) Clupeiformes ANCESTRAL SPECIES 73 ENSGT00950000183012.A.a.c.a ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.c #25 ENSGT00940000168407 ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 23 histh1l1 (ENSCHAG00000018193) loxl2b (ENSCHAG00000017766) sfrp1a (ENSCHAG00000017740) ENSCHAG00000017714 tcima (ENSCHAG00000017708) adam28 (ENSCHAG00000017025) ppp3cca (ENSCHAG00000015838) VPS37B (ENSCHAG00000015801) abcb9 (ENSCHAG00000015679) zgc:113436 (ENSCHAG00000015675) ogfod2 (ENSCHAG00000015636) SLC4A5 (ENSCHAG00000009043) zgc:110329 (ENSCHAG00000008826) TACR1 (ENSCHAG00000008539) ncaph (ENSCHAG00000008490) vamp8 (ENSCHAG00000008485) #22 vamp8 (ENSCHAG00000008477) #22 ENSCHAG00000008450 znf703 (ENSCHAG00000008443) ERLIN2 (ENSCHAG00000003959) ENSCHAG00000003775 bmp10 (ENSCHAG00000003760) arhgap25 (ENSCHAG00000003715) cds2 (ENSCHAG00000000928) zgc:65851 (ENSCHAG00000027688) ENSCHAG00000027687 ENSCHAG00000027686 snrnp27 (ENSCHAG00000027685) add2 (ENSCHAG00000027679) figla (ENSCHAG00000027670) ENSCHAG00000027668 Atlantic herring MODERN SPECIES 23 loxl2b (ENSCHAG00000017766) sfrp1a (ENSCHAG00000017740) ENSCHAG00000017714 tcima (ENSCHAG00000017708) adam28 (ENSCHAG00000017025) ppp3cca (ENSCHAG00000015838) VPS37B (ENSCHAG00000015801) abcb9 (ENSCHAG00000015679) zgc:113436 (ENSCHAG00000015675) ogfod2 (ENSCHAG00000015636) SLC4A5 (ENSCHAG00000009043) zgc:110329 (ENSCHAG00000008826) TACR1 (ENSCHAG00000008539) ncaph (ENSCHAG00000008490) vamp8 (ENSCHAG00000008485) #22 vamp8 (ENSCHAG00000008477) #22 ENSCHAG00000008450 znf703 (ENSCHAG00000008443) ERLIN2 (ENSCHAG00000003959) ENSCHAG00000003775 bmp10 (ENSCHAG00000003760) arhgap25 (ENSCHAG00000003715) cds2 (ENSCHAG00000000928) zgc:65851 (ENSCHAG00000027688) ENSCHAG00000027687 ENSCHAG00000027686 snrnp27 (ENSCHAG00000027685) add2 (ENSCHAG00000027679) figla (ENSCHAG00000027670) ENSCHAG00000027668 hk2 (ENSCHAG00000027656) Denticle herring MODERN SPECIES 2 sfrp1a (ENSDCDG00000031498) ENSDCDG00000031499 ENSDCDG00000014718 tcima (ENSDCDG00000014728) adam28 (ENSDCDG00000014828) adam28 (ENSDCDG00000017123) ppp3cca (ENSDCDG00000017352) vps37ba (ENSDCDG00000018097) abcb9 (ENSDCDG00000018102) zgc:113436 (ENSDCDG00000018105) ogfod2 (ENSDCDG00000018109) SLC4A5 (ENSDCDG00000018118) zgc:110329 (ENSDCDG00000018155) TACR1 (ENSDCDG00000018159) ncaph (ENSDCDG00000018170) vamp8 (ENSDCDG00000018186) #22 vamp5 (ENSDCDG00000018189) #23 rnf181 (ENSDCDG00000018190) #24 tmem150aa (ENSDCDG00000018194) #25 ENSDCDG00000018199 znf703 (ENSDCDG00000018206) ERLIN2 (ENSDCDG00000018212) ENSDCDG00000018932 bmp10 (ENSDCDG00000018939) arhgap25 (ENSDCDG00000018981) cds2 (ENSDCDG00000019064) zgc:65851 (ENSDCDG00000021503) ENSDCDG00000021945 snrnp27 (ENSDCDG00000021946) add2 (ENSDCDG00000021966) figla (ENSDCDG00000022329) Euteleosteomorpha ANCESTRAL SPECIES 15 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00940000154962.A.a.a ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 Acanthomorphata ANCESTRAL SPECIES 46 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000165973 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00940000154962.A.a.a ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 Euacanthomorphacea ANCESTRAL SPECIES 22 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000165973 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b #25 ENSGT00940000157438.c ENSGT00510000047107.B.d ENSGT00390000015494 ENSGT00940000156161.B ENSGT00950000183200.B ENSGT01010000222287.B.a.a.a.b ENSGT00550000074823.b.b ENSGT00940000156599 ENSGT00940000160709 ENSGT00400000022306 ENSGT00870000136894 Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Anabantaria ANCESTRAL SPECIES 4 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Zig-zag eel MODERN SPECIES 23 GOLGA7 (ENSMAMG00000019889) sfrp1a (ENSMAMG00000019906) ENSMAMG00000019914 ENSMAMG00000025063 tcima (ENSMAMG00000019934) adam28 (ENSMAMG00000019956) ppp3cca (ENSMAMG00000019973) vps37ba (ENSMAMG00000028452) abcb9 (ENSMAMG00000019989) zgc:113436 (ENSMAMG00000020002) ogfod2 (ENSMAMG00000020010) ENSMAMG00000020015 zgc:110329 (ENSMAMG00000020042) ENSMAMG00000020058 ncaph (ENSMAMG00000020084) vamp8 (ENSMAMG00000020090) #22 vamp5 (ENSMAMG00000026170) #23 ENSMAMG00000020116 ENSMAMG00000003876 ENSMAMG00000024321 ENSMAMG00000027903 ENSMAMG00000020150 GCN1 (ENSMAMG00000020175) rab35b (ENSMAMG00000020222) BICDL1 (ENSMAMG00000025361) CIT (ENSMAMG00000020242) mtmr3 (ENSMAMG00000020277) ENSMAMG00000020312 myl2b (ENSMAMG00000020322) ENSMAMG00000020330 pptc7a (ENSMAMG00000020333) Anabantoidei ANCESTRAL SPECIES 4 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Siamese fighting fish MODERN SPECIES 20 irf5 (ENSBSLG00000007660) ENSBSLG00000007676 arrdc1a (ENSBSLG00000008125) ZMAT4 (ENSBSLG00000008138) tcima (ENSBSLG00000008148) adam28 (ENSBSLG00000008182) ppp3cca (ENSBSLG00000009639) vps37ba (ENSBSLG00000010934) abcb9 (ENSBSLG00000010955) zgc:113436 (ENSBSLG00000011013) ogfod2 (ENSBSLG00000011026) SLC4A5 (ENSBSLG00000011075) zgc:110329 (ENSBSLG00000011498) TACR1 (ENSBSLG00000011503) ncaph (ENSBSLG00000011522) vamp8 (ENSBSLG00000011535) #22 vamp5 (ENSBSLG00000011537) #23 GCN1 (ENSBSLG00000011568) rab35b (ENSBSLG00000012753) BICDL1 (ENSBSLG00000012763) CIT (ENSBSLG00000012807) mtmr3 (ENSBSLG00000013939) CUX2 (ENSBSLG00000014450) myl2b (ENSBSLG00000014539) PPP1CA (ENSBSLG00000014565) pptc7a (ENSBSLG00000014615) rad9b (ENSBSLG00000014620) ENSBSLG00000014628 anapc7 (ENSBSLG00000014734) ENSBSLG00000014780 ift81 (ENSBSLG00000014857) Climbing perch MODERN SPECIES 22 GOLGA7 (ENSATEG00000028606) sfrp1a (ENSATEG00000012617) ZMAT4 (ENSATEG00000012630) tcima (ENSATEG00000012681) adam28 (ENSATEG00000012712) ppp3cca (ENSATEG00000012726) vps37ba (ENSATEG00000012792) abcb9 (ENSATEG00000012815) abcb9 (ENSATEG00000028830) zgc:113436 (ENSATEG00000012896) ogfod2 (ENSATEG00000012924) ENSATEG00000012940 zgc:110329 (ENSATEG00000013011) ENSATEG00000013036 ncaph (ENSATEG00000013071) vamp8 (ENSATEG00000013089) #22 ENSATEG00000026456 GCN1 (ENSATEG00000013126) rab35b (ENSATEG00000027393) BICDL1 (ENSATEG00000013310) CIT (ENSATEG00000013350) mtmr3 (ENSATEG00000013476) ENSATEG00000013587 ENSATEG00000013652 myl2b (ENSATEG00000013665) ENSATEG00000013678 pptc7a (ENSATEG00000013725) rad9b (ENSATEG00000026109) ENSATEG00000013745 ENSATEG00000013754 ENSATEG00000013767 Carangaria ANCESTRAL SPECIES 9 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Pleuronectoidei ANCESTRAL SPECIES 8 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D.f ENSGT00940000159895 Turbot MODERN SPECIES 21 ENSSMAG00000012745 dph7 (ENSSMAG00000012702) zgc:64051 (ENSSMAG00000030509) araf (ENSSMAG00000012640) imp4 (ENSSMAG00000012628) ENSSMAG00000012543 ENSSMAG00000012488 ENSSMAG00000012532 ENSSMAG00000012472 ENSSMAG00000012390 ENSSMAG00000012348 zgc:110329 (ENSSMAG00000012338) ENSSMAG00000012313 ENSSMAG00000000538 ncaph (ENSSMAG00000000587) vamp8 (ENSSMAG00000000616) #22 ENSSMAG00000000623 vamp5 (ENSSMAG00000000624) #23 GCN1 (ENSSMAG00000000634) rab35b (ENSSMAG00000000660) BICDL1 (ENSSMAG00000000673) CIT (ENSSMAG00000000699) mtmr3 (ENSSMAG00000000721) ENSSMAG00000000750 myl2b (ENSSMAG00000000778) ENSSMAG00000000797 pptc7a (ENSSMAG00000024284) rad9b (ENSSMAG00000000855) ENSSMAG00000000914 ENSSMAG00000000938 ENSSMAG00000000971 Tongue sole MODERN SPECIES 398 tcima (ENSCSEG00000013759) ZMAT4 (ENSCSEG00000013707) sfrp1a (ENSCSEG00000013689) GOLGA7 (ENSCSEG00000013674) loxl2b (ENSCSEG00000013648) cyb561a3a (ENSCSEG00000013638) ppp3cca (ENSCSEG00000013631) vps37ba (ENSCSEG00000013626) abcb9 (ENSCSEG00000013604) zgc:113436 (ENSCSEG00000013592) ogfod2 (ENSCSEG00000013584) SLC4A5 (ENSCSEG00000013560) zgc:110329 (ENSCSEG00000013539) TACR1 (ENSCSEG00000013520) ncaph (ENSCSEG00000013491) vamp8 (ENSCSEG00000013482) #22 vamp5 (ENSCSEG00000013478) #23 GCN1 (ENSCSEG00000013414) RAB35 (ENSCSEG00000013400) BICDL1 (ENSCSEG00000013381) CIT (ENSCSEG00000013336) MTMR3 (ENSCSEG00000013275) ENSCSEG00000010481 myl2b (ENSCSEG00000010465) pptc7a (ENSCSEG00000010462) ENSCSEG00000010443 ENSCSEG00000010435 ENSCSEG00000010426 anapc7 (ENSCSEG00000010399) ENSCSEG00000010324 PPP1CA (ENSCSEG00000010307) Carangaria_A ANCESTRAL SPECIES 6 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Seriola ANCESTRAL SPECIES 7 ENSGT00950000183197.b.a.a ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Greater amberjack MODERN SPECIES 6 loxl2b (ENSSDUG00000005974) GOLGA7 (ENSSDUG00000005942) sfrp1a (ENSSDUG00000005928) ZMAT4 (ENSSDUG00000005878) tcima (ENSSDUG00000005844) adam28 (ENSSDUG00000005793) ppp3cca (ENSSDUG00000005729) vps37ba (ENSSDUG00000005714) ENSSDUG00000005695 zgc:113436 (ENSSDUG00000005639) ogfod2 (ENSSDUG00000005622) SLC4A5 (ENSSDUG00000005571) zgc:110329 (ENSSDUG00000005551) TACR1 (ENSSDUG00000005198) ncaph (ENSSDUG00000005124) vamp8 (ENSSDUG00000005112) #22 ENSSDUG00000005103 ENSSDUG00000005090 GCN1 (ENSSDUG00000004981) rab35b (ENSSDUG00000004950) BICDL1 (ENSSDUG00000004909) CIT (ENSSDUG00000004823) mtmr3 (ENSSDUG00000004695) CUX2 (ENSSDUG00000004626) myl2b (ENSSDUG00000004428) PPP1CA (ENSSDUG00000004376) pptc7a (ENSSDUG00000004359) rad9b (ENSSDUG00000004341) ENSSDUG00000004324 ENSSDUG00000004303 anapc7 (ENSSDUG00000004264) Yellowtail amberjack MODERN SPECIES 3287 loxl2b (ENSSLDG00000012869) GOLGA7 (ENSSLDG00000012903) sfrp1a (ENSSLDG00000012926) ZMAT4 (ENSSLDG00000012934) tcima (ENSSLDG00000012948) adam28 (ENSSLDG00000012971) ppp3cca (ENSSLDG00000013023) vps37ba (ENSSLDG00000013072) ENSSLDG00000013084 zgc:113436 (ENSSLDG00000013104) ogfod2 (ENSSLDG00000013123) SLC4A5 (ENSSLDG00000013140) zgc:110329 (ENSSLDG00000013172) TACR1 (ENSSLDG00000013188) ncaph (ENSSLDG00000013204) vamp8 (ENSSLDG00000013223) #22 ENSSLDG00000013230 vamp5 (ENSSLDG00000013238) #23 GCN1 (ENSSLDG00000013262) rab35b (ENSSLDG00000013395) BICDL1 (ENSSLDG00000013416) CIT (ENSSLDG00000013447) mtmr3 (ENSSLDG00000013542) CUX2 (ENSSLDG00000013650) myl2b (ENSSLDG00000013784) PPP1CA (ENSSLDG00000013802) pptc7a (ENSSLDG00000013835) ENSSLDG00000013873 ENSSLDG00000013885 ENSSLDG00000013897 ENSSLDG00000013909 Barramundi perch MODERN SPECIES 95 loxl2b (ENSLCAG00010027448) GOLGA7 (ENSLCAG00010027472) sfrp1a (ENSLCAG00010027475) ZMAT4 (ENSLCAG00010027477) tcima (ENSLCAG00010027480) adam28 (ENSLCAG00010027484) ppp3cca (ENSLCAG00010027529) vps37ba (ENSLCAG00010027566) abcb9 (ENSLCAG00010027567) zgc:113436 (ENSLCAG00010027572) ogfod2 (ENSLCAG00010027575) SLC4A5 (ENSLCAG00010027642) zgc:110329 (ENSLCAG00010027683) TACR1 (ENSLCAG00010027685) ncaph (ENSLCAG00010027686) vamp8 (ENSLCAG00010027688) #22 ENSLCAG00010027690 vamp5 (ENSLCAG00010027692) #23 CIT (ENSLCAG00010027703) GCN1 (ENSLCAG00010027714) rab35b (ENSLCAG00010027717) BICDL1 (ENSLCAG00010027718) MTMR3 (ENSLCAG00010027737) CUX2 (ENSLCAG00010027764) myl2b (ENSLCAG00010027766) PPP1CA (ENSLCAG00010027768) pptc7a (ENSLCAG00010027769) rad9b (ENSLCAG00010027770) ENSLCAG00010027771 ENSLCAG00010027772 anapc7 (ENSLCAG00010027774) Eupercaria ANCESTRAL SPECIES 5 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Tetraodontidae ANCESTRAL SPECIES 24 ENSGT00950000183197.b.a.a ENSGT00940000155874.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00390000015494 ENSGT00940000156161.B ENSGT00950000182960.a.b ENSGT00940000165390.b.d ENSGT00940000155553.e.b ENSGT00530000065159 ENSGT00550000074618.b ENSGT00390000004950 ENSGT00500000044989 ENSGT00950000182850.a.b.b.a ENSGT00390000012859 ENSGT00950000182925.B.a ENSGT00940000156081.i ENSGT00940000154960 Fugu MODERN SPECIES 13 cyb561a3a (ENSTRUG00000004442) loxl2b (ENSTRUG00000004680) sfrp1 (ENSTRUG00000005052) ZMAT4 (ENSTRUG00000005170) tcima (ENSTRUG00000005285) adam28 (ENSTRUG00000005293) ppp3cca (ENSTRUG00000006318) vps37ba (ENSTRUG00000021045) abcb9 (ENSTRUG00000007111) zgc:113436 (ENSTRUG00000007593) ogfod2 (ENSTRUG00000007634) SLC4A5 (ENSTRUG00000007729) zgc:110329 (ENSTRUG00000009014) tacr1 (ENSTRUG00000009160) ncaph (ENSTRUG00000009464) vamp8 (ENSTRUG00000028330) #22 vamp5 (ENSTRUG00000025146) #23 ENSTRUG00000022284 IDUA (ENSTRUG00000010281) tnksb (ENSTRUG00000010518) actbc (ENSTRUG00000004099) ENSTRUG00000030130 ENSTRUG00000028752 ENSTRUG00000003423 pik3r1 (ENSTRUG00000010930) ENSTRUG00000033074 ENSTRUG00000011169 srp19 (ENSTRUG00000033163) ENSTRUG00000023119 ENSTRUG00000023223 ENSTRUG00000025700 Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Ballan wrasse MODERN SPECIES 87 abcb9 (ENSLBEG00000002512) zgc:113436 (ENSLBEG00000002496) ogfod2 (ENSLBEG00000002431) SLC4A5 (ENSLBEG00000002346) ENSLBEG00000002310 zgc:110329 (ENSLBEG00000002294) ENSLBEG00000002284 ENSLBEG00000002261 TACR1 (ENSLBEG00000002230) ENSLBEG00000002217 ENSLBEG00000002203 ncaph (ENSLBEG00000002034) vamp8 (ENSLBEG00000001994) #22 vamp5 (ENSLBEG00000001979) #23 vamp5 (ENSLBEG00000001949) #23 GCN1 (ENSLBEG00000001752) rab35b (ENSLBEG00000001618) anapc7 (ENSLBEG00000001563) ENSLBEG00000001535 ENSLBEG00000001507 rad9b (ENSLBEG00000001453) pptc7a (ENSLBEG00000001355) PPP1CA (ENSLBEG00000001314) CUX2 (ENSLBEG00000001200) mtmr3 (ENSLBEG00000001129) CIT (ENSLBEG00000001001) BICDL1 (ENSLBEG00000000956) ENSLBEG00000000927 Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Perciformes ANCESTRAL SPECIES 6 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Perciformes_a ANCESTRAL SPECIES 4 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Channel bull blenny MODERN SPECIES 23 sfrp1a (ENSCGOG00000005016) ZMAT4 (ENSCGOG00000005020) ENSCGOG00000005023 tcima (ENSCGOG00000005024) adam28 (ENSCGOG00000005031) ppp3cca (ENSCGOG00000005192) vps37ba (ENSCGOG00000005610) abcb9 (ENSCGOG00000005613) zgc:113436 (ENSCGOG00000005648) ogfod2 (ENSCGOG00000005650) SLC4A5 (ENSCGOG00000005655) zgc:110329 (ENSCGOG00000005663) TACR1 (ENSCGOG00000005683) ENSCGOG00000005725 ncaph (ENSCGOG00000005728) vamp8 (ENSCGOG00000005755) #22 ENSCGOG00000005758 GCN1 (ENSCGOG00000005766) rab35b (ENSCGOG00000006003) BICDL1 (ENSCGOG00000006011) CIT (ENSCGOG00000006028) ENSCGOG00000007220 myl2b (ENSCGOG00000007224) PPP1CA (ENSCGOG00000007322) pptc7a (ENSCGOG00000007962) rad9b (ENSCGOG00000007971) ENSCGOG00000007975 ENSCGOG00000007980 anapc7 (ENSCGOG00000007996) ENSCGOG00000008248 ift81 (ENSCGOG00000015285) Pike perch DUPLICATION Pike perch MODERN SPECIES 170 ncaph (ENSSLUG00000021506) vamp8 (ENSSLUG00000021497) #22 vamp8 (ENSSLUG00000021490) #22 vamp5 (ENSSLUG00000021483) #23 GCN1 (ENSSLUG00000016048) rab35b (ENSSLUG00000015585) ENSSLUG00000015577 CIT (ENSSLUG00000013086) mtmr3 (ENSSLUG00000011834) CUX2 (ENSSLUG00000011762) ENSSLUG00000011756 myl2b (ENSSLUG00000011751) PPP1CA (ENSSLUG00000011691) pptc7a (ENSSLUG00000011675) rad9b (ENSSLUG00000011664) ENSSLUG00000011656 ENSSLUG00000011619 Pike perch MODERN SPECIES 170 ncaph (ENSSLUG00000021506) vamp8 (ENSSLUG00000021497) #22 vamp8 (ENSSLUG00000021490) #22 vamp5 (ENSSLUG00000021483) #23 GCN1 (ENSSLUG00000016048) rab35b (ENSSLUG00000015585) ENSSLUG00000015577 CIT (ENSSLUG00000013086) mtmr3 (ENSSLUG00000011834) CUX2 (ENSSLUG00000011762) ENSSLUG00000011756 myl2b (ENSSLUG00000011751) PPP1CA (ENSSLUG00000011691) pptc7a (ENSSLUG00000011675) rad9b (ENSSLUG00000011664) ENSSLUG00000011656 ENSSLUG00000011619 anapc7 (ENSSLUG00000011592) Cottioidei ANCESTRAL SPECIES 11 ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Stickleback MODERN SPECIES 12 ENSGACG00000013686 ENSGACG00000013684 erap1b (ENSGACG00000013677) naaladl1 (ENSGACG00000013669) ATOSB (ENSGACG00000013665) cenatac (ENSGACG00000013661) ENSGACG00000013660 ENSGACG00000013659 ENSGACG00000013652 zgc:113436 (ENSGACG00000013649) ogfod2 (ENSGACG00000013642) SLC4A5 (ENSGACG00000013635) zgc:110329 (ENSGACG00000013615) TACR1 (ENSGACG00000013609) ncaph (ENSGACG00000013606) vamp8 (ENSGACG00000013595) #22 ENSGACG00000013593 GCN1 (ENSGACG00000013560) rab35b (ENSGACG00000013548) BICDL1 (ENSGACG00000013543) CIT (ENSGACG00000013534) mtmr3 (ENSGACG00000013531) CUX2 (ENSGACG00000013522) myl2b (ENSGACG00000013491) PPP1CA (ENSGACG00000013477) pptc7a (ENSGACG00000013469) rad9b (ENSGACG00000013463) ENSGACG00000013448 anapc7 (ENSGACG00000013441) ATP2A1 (ENSGACG00000013436) ift81 (ENSGACG00000013431) Lumpfish DUPLICATION Lumpfish MODERN SPECIES 24 aacs (ENSCLMG00005001022) GAK (ENSCLMG00005001031) erap1b (ENSCLMG00005001068) naaladl1 (ENSCLMG00005001094) ENSCLMG00005001102 cenatac (ENSCLMG00005001179) ENSCLMG00005001180 ENSCLMG00005001183 ENSCLMG00005001197 zgc:113436 (ENSCLMG00005001198) ogfod2 (ENSCLMG00005001199) SLC4A5 (ENSCLMG00005001200) zgc:110329 (ENSCLMG00005001202) TACR1 (ENSCLMG00005001204) ncaph (ENSCLMG00005001205) vamp8 (ENSCLMG00005001207) #22 vamp8 (ENSCLMG00005001209) #22 vamp5 (ENSCLMG00005001210) #23 GCN1 (ENSCLMG00005001263) rab35b (ENSCLMG00005006584) ENSCLMG00005006587 ENSCLMG00005006589 CIT (ENSCLMG00005006599) mtmr3 (ENSCLMG00005006629) ENSCLMG00005009256 ENSCLMG00005009259 myl2b (ENSCLMG00005009264) PPP1CA (ENSCLMG00005009281) pptc7a (ENSCLMG00005009282) ENSCLMG00005009284 ENSCLMG00005009285 Lumpfish MODERN SPECIES 24 GAK (ENSCLMG00005001031) erap1b (ENSCLMG00005001068) naaladl1 (ENSCLMG00005001094) ENSCLMG00005001102 cenatac (ENSCLMG00005001179) ENSCLMG00005001180 ENSCLMG00005001183 ENSCLMG00005001197 zgc:113436 (ENSCLMG00005001198) ogfod2 (ENSCLMG00005001199) SLC4A5 (ENSCLMG00005001200) zgc:110329 (ENSCLMG00005001202) TACR1 (ENSCLMG00005001204) ncaph (ENSCLMG00005001205) vamp8 (ENSCLMG00005001207) #22 vamp8 (ENSCLMG00005001209) #22 vamp5 (ENSCLMG00005001210) #23 GCN1 (ENSCLMG00005001263) rab35b (ENSCLMG00005006584) ENSCLMG00005006587 ENSCLMG00005006589 CIT (ENSCLMG00005006599) mtmr3 (ENSCLMG00005006629) ENSCLMG00005009256 ENSCLMG00005009259 myl2b (ENSCLMG00005009264) PPP1CA (ENSCLMG00005009281) pptc7a (ENSCLMG00005009282) ENSCLMG00005009284 ENSCLMG00005009285 ENSCLMG00005009287 Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b Gilthead seabream MODERN SPECIES 19 ENSSAUG00010017057 ENSSAUG00010017060 ENSSAUG00010017062 ENSSAUG00010017065 ENSSAUG00010017067 ENSSAUG00010017070 ENSSAUG00010017072 ENSSAUG00010017076 ENSSAUG00010017081 ENSSAUG00010017083 ENSSAUG00010017086 ENSSAUG00010017088 ENSSAUG00010017090 ENSSAUG00010017091 ncaph (ENSSAUG00010017101) vamp8 (ENSSAUG00010017117) #22 ENSSAUG00010017121 ENSSAUG00010017122 #23 ankrd39 (ENSSAUG00010017127) kctd9a (ENSSAUG00010017134) ENSSAUG00010017426 ENSSAUG00010017435 ENSSAUG00010017439 ankrd39 (ENSSAUG00010017443) npy8br (ENSSAUG00010017451) KLHL22 (ENSSAUG00010017453) tbx16 (ENSSAUG00010017458) CABIN1 (ENSSAUG00010017542) NEFL (ENSSAUG00010018594) dock5 (ENSSAUG00010018636) ENSSAUG00010019630 Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Large yellow croaker MODERN SPECIES 15 ENSLCRG00005005624 ncaph (ENSLCRG00005005619) vamp8 (ENSLCRG00005005617) #22 mamdc2a (ENSLCRG00005005205) ptar1 (ENSLCRG00005005201) APBA1 (ENSLCRG00005005191) ENSLCRG00005005189 ENTREP1 (ENSLCRG00005005187) ENSLCRG00005005183 European seabass MODERN SPECIES 13 hdr (ENSDLAG00005023753) cyb561a3a (ENSDLAG00005023747) loxl2b (ENSDLAG00005023456) GOLGA7 (ENSDLAG00005027912) sfrp1a (ENSDLAG00005023430) ZMAT4 (ENSDLAG00005023417) tcima (ENSDLAG00005034655) adam28 (ENSDLAG00005022944) ppp3cca (ENSDLAG00005022073) abcb9 (ENSDLAG00005021967) ogfod2 (ENSDLAG00005021949) ENSDLAG00005017585 zgc:110329 (ENSDLAG00005017409) ENSDLAG00005032243 ncaph (ENSDLAG00005017350) vamp8 (ENSDLAG00005031416) #22 ENSDLAG00005017335 GCN1 (ENSDLAG00005014771) rab35b (ENSDLAG00005014678) BICDL1 (ENSDLAG00005027371) CIT (ENSDLAG00005012156) mtmr3 (ENSDLAG00005011179) ENSDLAG00005010848 ENSDLAG00005034770 myl2b (ENSDLAG00005010816) ENSDLAG00005010713 rad9b (ENSDLAG00005033090) ENSDLAG00005010657 ENSDLAG00005031210 ENSDLAG00005009435 ENSDLAG00005009315 Ovalentaria ANCESTRAL SPECIES 4 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00940000170695.a ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Poeciliinae ANCESTRAL SPECIES 5 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00940000170695.b ENSGT00940000170695.a.a ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b.h ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D Poecilia ANCESTRAL SPECIES 3 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00940000170695.b ENSGT00940000170695.a.a ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b.g ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D NAME_6 ANCESTRAL SPECIES 113 ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00770000121653 ENSGT00940000170695.a.b ENSGT00940000170695.a.a ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b.g ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D Sailfin molly MODERN SPECIES 1890 ncaph (ENSPLAG00000020769) vamp8 (ENSPLAG00000020773) #22 ENSPLAG00000020781 ENSPLAG00000020785 ENSPLAG00000020796 GCN1 (ENSPLAG00000020939) rab35b (ENSPLAG00000020989) ENSPLAG00000021003 Amazon molly MODERN SPECIES 559 ncaph (ENSPFOG00000008128) vamp8 (ENSPFOG00000008116) #22 ENSPFOG00000024348 ENSPFOG00000008114 ENSPFOG00000008111 GCN1 (ENSPFOG00000006849) rab35b (ENSPFOG00000006655) ENSPFOG00000006649 BICDL1 (ENSPFOG00000006467) CIT (ENSPFOG00000005953) mtmr3 (ENSPFOG00000005445) CUX2 (ENSPFOG00000005210) myl2b (ENSPFOG00000005135) PPP1CA (ENSPFOG00000004951) PPP1CA (ENSPFOG00000004821) pptc7a (ENSPFOG00000004803) rad9b (ENSPFOG00000004776) Guppy MODERN SPECIES 461 sfrp1a (ENSPREG00000014903) ENSPREG00000014914 ENSPREG00000014925 tcima (ENSPREG00000014933) adam28 (ENSPREG00000014950) ppp3cca (ENSPREG00000014983) vps37ba (ENSPREG00000015058) abcb9 (ENSPREG00000015084) zgc:113436 (ENSPREG00000015156) ogfod2 (ENSPREG00000015177) SLC4A5 (ENSPREG00000015215) zgc:110329 (ENSPREG00000015308) TACR1 (ENSPREG00000015318) ENSPREG00000015327 ncaph (ENSPREG00000015343) vamp8 (ENSPREG00000015363) #22 ENSPREG00000015378 ENSPREG00000015407 ENSPREG00000015425 GCN1 (ENSPREG00000015452) rab35b (ENSPREG00000015586) BICDL1 (ENSPREG00000015604) CIT (ENSPREG00000015646) mtmr3 (ENSPREG00000015747) CUX2 (ENSPREG00000015884) ENSPREG00000015959 myl2b (ENSPREG00000015972) rad9b (ENSPREG00000016000) PPP1CA (ENSPREG00000016046) pptc7a (ENSPREG00000016072) ENSPREG00000016084 Platyfish MODERN SPECIES 2 slc13a2 (ENSXMAG00000007813) slc13a2 (ENSXMAG00000022850) unc119b (ENSXMAG00000028249) cryba1b (ENSXMAG00000007782) ENSXMAG00000007778 trarg1b (ENSXMAG00000007781) ENSXMAG00000007769 FBXO40 (ENSXMAG00000007765) FBXO40 (ENSXMAG00000007758) ENSXMAG00000007756 SLC4A5 (ENSXMAG00000010236) ENSXMAG00000029195 zgc:110329 (ENSXMAG00000010226) TACR1 (ENSXMAG00000010211) ncaph (ENSXMAG00000010170) vamp8 (ENSXMAG00000025359) #22 ENSXMAG00000025876 ENSXMAG00000003952 ENSXMAG00000022828 GCN1 (ENSXMAG00000003953) rab35b (ENSXMAG00000004014) BICDL1 (ENSXMAG00000004026) ENSXMAG00000004028 CIT (ENSXMAG00000004054) mtmr3 (ENSXMAG00000004090) CUX2 (ENSXMAG00000004131) ENSXMAG00000022801 myl2b (ENSXMAG00000004161) PPP1CA (ENSXMAG00000021699) pptc7a (ENSXMAG00000029877) ENSXMAG00000004205 NAME_4 ANCESTRAL SPECIES 43 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695.a ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Sheepshead minnow MODERN SPECIES 267 ncaph (ENSCVAG00000005618) vamp8 (ENSCVAG00000005628) #22 ENSCVAG00000000163 ENSCVAG00000005640 ENSCVAG00000005703 KCNH2 (ENSCVAG00000005754) ENSCVAG00000005984 aoc1 (ENSCVAG00000005996) ENSCVAG00000006007 ENSCVAG00000006023 ENSCVAG00000006042 ENSCVAG00000006057 GFOD1 (ENSCVAG00000006070) ENSCVAG00000006644 Mummichog MODERN SPECIES 236 ENSFHEG00000022872 tcima (ENSFHEG00000022911) adam28 (ENSFHEG00000022932) ppp3cca (ENSFHEG00000022988) ENSFHEG00000023003 vps37ba (ENSFHEG00000023017) abcb9 (ENSFHEG00000023024) zgc:113436 (ENSFHEG00000023037) ogfod2 (ENSFHEG00000023045) SLC4A5 (ENSFHEG00000023128) ENSFHEG00000023158 zgc:110329 (ENSFHEG00000023172) TACR1 (ENSFHEG00000023196) ncaph (ENSFHEG00000023210) ENSFHEG00000023221 vamp8 (ENSFHEG00000004687) #22 ENSFHEG00000004694 ENSFHEG00000004705 ENSFHEG00000004719 GCN1 (ENSFHEG00000004847) rab35b (ENSFHEG00000004891) BICDL1 (ENSFHEG00000004915) CIT (ENSFHEG00000005006) mtmr3 (ENSFHEG00000005051) CUX2 (ENSFHEG00000005155) MYL2 (ENSFHEG00000005178) PPP1CA (ENSFHEG00000005215) pptc7a (ENSFHEG00000005238) rad9b (ENSFHEG00000005243) ENSFHEG00000005269 anapc7 (ENSFHEG00000005286) Aplocheiloidei ANCESTRAL SPECIES 449 ENSGT00390000004149 ENSGT00940000160325.b #22 Mangrove rivulus MODERN SPECIES 30 si:dkey-91m11.5 (ENSKMAG00000007584) ift81 (ENSKMAG00000007475) ENSKMAG00000007392 anapc7 (ENSKMAG00000007339) ENSKMAG00000007321 rad9b (ENSKMAG00000007302) pptc7a (ENSKMAG00000007280) PPP1CA (ENSKMAG00000007243) myl2b (ENSKMAG00000007190) CUX2 (ENSKMAG00000007108) mtmr3 (ENSKMAG00000007036) CIT (ENSKMAG00000006973) BICDL1 (ENSKMAG00000006901) rab35b (ENSKMAG00000006854) GCN1 (ENSKMAG00000006716) vamp8 (ENSKMAG00000006673) #22 ENSKMAG00000006623 ncaph (ENSKMAG00000006600) Turquoise killifish MODERN SPECIES 1628 ENSNFUG00015017450 CAP2 (ENSNFUG00015017505) RBM24A (ENSNFUG00015018351) TRIQK (ENSNFUG00015018355) runx1t1 (ENSNFUG00015018373) OTUD6B (ENSNFUG00015018725) RAB5AA (ENSNFUG00015018732) kat2b (ENSNFUG00015018758) ENSNFUG00015019192 ZNF385D (ENSNFUG00015019197) rab25a (ENSNFUG00015019204) UBQLN4 (ENSNFUG00015019223) LIM2 (ENSNFUG00015019294) TINAGL1 (ENSNFUG00015019296) ncaph (ENSNFUG00015019332) vamp8 (ENSNFUG00015019343) #22 cfap300 (ENSNFUG00015019344) KCNQ4 (ENSNFUG00015019359) NFYC (ENSNFUG00015020051) ENSNFUG00015020066 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020094 DNAL1 (ENSNFUG00015020100) fkbp9 (ENSNFUG00015020111) crtap (ENSNFUG00015020158) ENSNFUG00015020165 fbxl2 (ENSNFUG00015020172) clasp2 (ENSNFUG00015020334) ubp1 (ENSNFUG00015021591) PDCD6IP (ENSNFUG00015021638) ARPP21 (ENSNFUG00015021713) Oryzias ANCESTRAL SPECIES 7 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Oryzias_a ANCESTRAL SPECIES 3 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Japanese Medaka HdrR MODERN SPECIES 23 ENSORLG00000025110 tcima (ENSORLG00000029012) ENSORLG00000026983 adam28 (ENSORLG00000016155) ENSORLG00000025506 ppp3cca (ENSORLG00000016121) vps37ba (ENSORLG00000027077) abcb9 (ENSORLG00000018804) ENSORLG00000021884 zgc:113436 (ENSORLG00000025451) ogfod2 (ENSORLG00000016067) ENSORLG00000016060 zgc:110329 (ENSORLG00000016053) tacr1a (ENSORLG00000016047) ncaph (ENSORLG00000016038) vamp8 (ENSORLG00000028078) #22 ENSORLG00000025338 ENSORLG00000026139 GCN1 (ENSORLG00000018601) ENSORLG00000028360 rab35b (ENSORLG00000028885) BICDL1 (ENSORLG00000025247) CIT (ENSORLG00000016017) mtmr3 (ENSORLG00000016006) CUX2 (ENSORLG00000015973) myl2b (ENSORLG00000015964) ENSORLG00000015948 pptc7a (ENSORLG00000015939) rad9b (ENSORLG00000024841) ENSORLG00000029278 anapc7 (ENSORLG00000015911) Oryzias_b ANCESTRAL SPECIES 61 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Indian medaka MODERN SPECIES 11 ENSOMEG00000003441 OXGR1 (ENSOMEG00000003407) tcima (ENSOMEG00000003390) adam28 (ENSOMEG00000003375) ppp3cca (ENSOMEG00000003329) vps37ba (ENSOMEG00000003260) abcb9 (ENSOMEG00000003239) zgc:113436 (ENSOMEG00000003139) ogfod2 (ENSOMEG00000003114) SLC4A5 (ENSOMEG00000003095) zgc:110329 (ENSOMEG00000003051) TACR1 (ENSOMEG00000022543) ENSOMEG00000022532 CALR (ENSOMEG00000022510) ncaph (ENSOMEG00000022480) vamp8 (ENSOMEG00000022447) #22 ENSOMEG00000022430 ENSOMEG00000022411 vamp5 (ENSOMEG00000022401) #23 GCN1 (ENSOMEG00000022378) rab35b (ENSOMEG00000022306) BICDL1 (ENSOMEG00000022288) CIT (ENSOMEG00000022244) mtmr3 (ENSOMEG00000022152) CUX2 (ENSOMEG00000022110) ENSOMEG00000022076 myl2b (ENSOMEG00000022062) PPP1CA (ENSOMEG00000022045) pptc7a (ENSOMEG00000022020) ENSOMEG00000021997 ENSOMEG00000021979 Javanese ricefish MODERN SPECIES 23 GOLGA7 (ENSOJAG00000021992) sfrp1a (ENSOJAG00000021982) OXGR1 (ENSOJAG00000021976) ENSOJAG00000021973 tcima (ENSOJAG00000021966) adam28 (ENSOJAG00000021961) ppp3cca (ENSOJAG00000021756) vps37ba (ENSOJAG00000021735) abcb9 (ENSOJAG00000021600) zgc:113436 (ENSOJAG00000021584) ogfod2 (ENSOJAG00000021570) SLC4A5 (ENSOJAG00000021079) zgc:110329 (ENSOJAG00000021023) TACR1 (ENSOJAG00000021018) ncaph (ENSOJAG00000020983) vamp8 (ENSOJAG00000020976) #22 vamp5 (ENSOJAG00000020966) #23 rab35b (ENSOJAG00000020669) BICDL1 (ENSOJAG00000020656) CIT (ENSOJAG00000019902) MTMR3 (ENSOJAG00000018164) ENSOJAG00000018069 ENSOJAG00000018048 myl2b (ENSOJAG00000018043) PPP1CA (ENSOJAG00000017843) pptc7a (ENSOJAG00000017816) rad9b (ENSOJAG00000017799) ENSOJAG00000017789 ENSOJAG00000017768 anapc7 (ENSOJAG00000017740) ENSOJAG00000016379 Ovalentaria_B ANCESTRAL SPECIES 9 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Cichlidae ANCESTRAL SPECIES 29 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Pseudocrenilabrinae ANCESTRAL SPECIES 26 ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716.`b ENSGT00940000156716.ab ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Pseudocrenilabrinae_A ANCESTRAL SPECIES 28 ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716.`b ENSGT00940000156716.ab ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a.f ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Haplochromini ANCESTRAL SPECIES 30 ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716.`b ENSGT00940000156716.ab ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a.f ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241 ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000160325.b #22 Haplochromini_B ANCESTRAL SPECIES 98 ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716.`b.a ENSGT00940000156716.ab ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a.f ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00940000158884 ENSGT01030000234983.b ENSGT00390000000543 ENSGT01100000263665 Eastern happy MODERN SPECIES 3 tcima (ENSACLG00000005067) adam28 (ENSACLG00000005291) adam28 (ENSACLG00000005313) ppp3cca (ENSACLG00000005362) vps37ba (ENSACLG00000005424) abcb9 (ENSACLG00000005433) zgc:113436 (ENSACLG00000005441) ogfod2 (ENSACLG00000005479) SLC4A5 (ENSACLG00000005488) zgc:110329 (ENSACLG00000005607) TACR1 (ENSACLG00000005634) ENSACLG00000005655 ENSACLG00000005662 ENSACLG00000005668 ncaph (ENSACLG00000005675) vamp8 (ENSACLG00000005712) #22 ENSACLG00000005719 E2F4 (ENSACLG00000005726) ENSACLG00000005740 ENSACLG00000005761 ENSACLG00000005767 ppm1f (ENSACLG00000005774) ENSACLG00000005780 ENSACLG00000005784 ENSACLG00000005788 ENSACLG00000005791 ENSACLG00000005800 TOP3B (ENSACLG00000005807) ENSACLG00000005867 ENSACLG00000005890 sdf2l1 (ENSACLG00000005901) Zebra mbuna MODERN SPECIES 1094 sfrp1a (ENSMZEG00005004970) ENSMZEG00005004956 ZMAT4 (ENSMZEG00005004946) tcima (ENSMZEG00005004931) adam28 (ENSMZEG00005004887) adam28 (ENSMZEG00005004829) ppp3cca (ENSMZEG00005004775) vps37ba (ENSMZEG00005004760) abcb9 (ENSMZEG00005004674) zgc:113436 (ENSMZEG00005004654) ogfod2 (ENSMZEG00005004642) SLC4A5 (ENSMZEG00005004599) zgc:110329 (ENSMZEG00005004587) TACR1 (ENSMZEG00005004559) ncaph (ENSMZEG00005004510) vamp8 (ENSMZEG00005004501) #22 ppm1f (ENSMZEG00005004464) ENSMZEG00005004424 ENSMZEG00005004401 ENSMZEG00005004385 TOP3B (ENSMZEG00005004304) ENSMZEG00005004254 sdf2l1 (ENSMZEG00005004238) marveld2b (ENSMZEG00005004221) oclnb (ENSMZEG00005004210) gtf2h2 (ENSMZEG00005004184) dhfr (ENSMZEG00005004160) ENSMZEG00005004151 ENSMZEG00005004144 sh3glb2a (ENSMZEG00005004116) dph7 (ENSMZEG00005004102) Burton s mouthbrooder MODERN SPECIES 561 TACR1 (ENSHBUG00000001397) ncaph (ENSHBUG00000001402) vamp8 (ENSHBUG00000001403) #22 ENSHBUG00000001406 GCN1 (ENSHBUG00000001413) rab35b (ENSHBUG00000001416) BICDL1 (ENSHBUG00000001424) CIT (ENSHBUG00000001432) mtmr3 (ENSHBUG00000001452) CUX2 (ENSHBUG00000001465) myl2b (ENSHBUG00000001469) PPP1CA (ENSHBUG00000001473) pptc7a (ENSHBUG00000001479) rad9b (ENSHBUG00000001484) ENSHBUG00000001488 ENSHBUG00000001493 anapc7 (ENSHBUG00000001499) ENSHBUG00000001521 Lyretail cichlid MODERN SPECIES 340 GOLGA7 (ENSNBRG00000011888) sfrp1a (ENSNBRG00000011863) ZMAT4 (ENSNBRG00000011844) tcima (ENSNBRG00000011831) adam28 (ENSNBRG00000011780) ppp3cca (ENSNBRG00000011730) vps37ba (ENSNBRG00000011718) ENSNBRG00000011710 ENSNBRG00000011692 zgc:113436 (ENSNBRG00000011684) ogfod2 (ENSNBRG00000011658) SLC4A5 (ENSNBRG00000011611) zgc:110329 (ENSNBRG00000011571) TACR1 (ENSNBRG00000011513) ncaph (ENSNBRG00000011377) vamp8 (ENSNBRG00000011354) #22 ENSNBRG00000011345 GCN1 (ENSNBRG00000011227) rab35b (ENSNBRG00000011200) BICDL1 (ENSNBRG00000011173) CIT (ENSNBRG00000011073) mtmr3 (ENSNBRG00000010981) CUX2 (ENSNBRG00000010931) ENSNBRG00000010920 myl2b (ENSNBRG00000010909) PPP1CA (ENSNBRG00000010882) pptc7a (ENSNBRG00000010870) ENSNBRG00000010829 ENSNBRG00000010814 ENSNBRG00000010754 ift81 (ENSNBRG00000010706) Nile tilapia MODERN SPECIES 3 sfrp1a (ENSONIG00000016088) ZMAT4 (ENSONIG00000016086) tcima (ENSONIG00000020658) adam28 (ENSONIG00000037088) adam28 (ENSONIG00000016049) ppp3cca (ENSONIG00000016043) vps37ba (ENSONIG00000016042) abcb9 (ENSONIG00000027542) ENSONIG00000033461 zgc:113436 (ENSONIG00000016040) ogfod2 (ENSONIG00000016038) SLC4A5 (ENSONIG00000016017) zgc:110329 (ENSONIG00000016015) TACR1 (ENSONIG00000016011) ncaph (ENSONIG00000016003) vamp8 (ENSONIG00000027234) #22 vamp5 (ENSONIG00000016002) #23 ENSONIG00000038691 GCN1 (ENSONIG00000015992) rab35 (ENSONIG00000033477) BICDL1 (ENSONIG00000015986) CIT (ENSONIG00000015985) mtmr3 (ENSONIG00000015980) CUX2 (ENSONIG00000015972) myl2b (ENSONIG00000015965) PPP1CA (ENSONIG00000015962) pptc7a (ENSONIG00000015960) rad9b (ENSONIG00000015959) ENSONIG00000030030 ENSONIG00000034981 ENSONIG00000015958 Pomacentridae ANCESTRAL SPECIES ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000170695 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241.ib ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D Pomacentridae_A ANCESTRAL SPECIES 1 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241.ib ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000155668.i.b Amphiprion ANCESTRAL SPECIES 18 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302 ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a.d ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000153612.B ENSGT00940000158557.n ENSGT00940000157442 ENSGT01030000234517.E.d ENSGT00940000157272 ENSGT00940000160241.ib ENSGT00940000155578.e.a ENSGT00940000153472.a.b ENSGT00390000011937.g.b ENSGT00390000005767.b ENSGT01050000245010 ENSGT00940000165298.a.b ENSGT00950000182950.D ENSGT00940000159895 Clown anemonefish MODERN SPECIES 169 ncaph (ENSAOCG00000016141) vamp8 (ENSAOCG00000016123) #22 Orange clownfish MODERN SPECIES 19 P4HA3 (ENSAPEG00000024483) tcima (ENSAPEG00000024489) adam28 (ENSAPEG00000024506) ENSAPEG00000024514 ppp3cca (ENSAPEG00000024519) abcb9 (ENSAPEG00000024529) zgc:113436 (ENSAPEG00000024538) ogfod2 (ENSAPEG00000024546) SLC4A5 (ENSAPEG00000000293) zgc:110329 (ENSAPEG00000000434) ENSAPEG00000000438 TACR1 (ENSAPEG00000000456) ENSAPEG00000000638 ENSAPEG00000000671 ncaph (ENSAPEG00000000681) vamp8 (ENSAPEG00000000893) #22 vamp5 (ENSAPEG00000000909) #23 GCN1 (ENSAPEG00000000930) rab35b (ENSAPEG00000001130) BICDL1 (ENSAPEG00000001139) CIT (ENSAPEG00000001149) mtmr3 (ENSAPEG00000001292) CUX2 (ENSAPEG00000001396) myl2b (ENSAPEG00000001537) PPP1CA (ENSAPEG00000001564) pptc7a (ENSAPEG00000001608) rad9b (ENSAPEG00000001635) ENSAPEG00000001691 ENSAPEG00000001740 anapc7 (ENSAPEG00000001774) ENSAPEG00000001821 Spiny chromis MODERN SPECIES 2998 vamp8 (ENSAPOG00000017914) #22 Bicolor damselfish MODERN SPECIES 1808 TACR1 (ENSSPAG00000022811) ENSSPAG00000022823 ncaph (ENSSPAG00000022834) vamp8 (ENSSPAG00000022848) #22 Tiger tail seahorse MODERN SPECIES 341 GOLGA7 (ENSHCOG00000006544) sfrp1a (ENSHCOG00000006530) ENSHCOG00000006516 tcima (ENSHCOG00000006507) adam28 (ENSHCOG00000006490) ENSHCOG00000006473 ppp3cca (ENSHCOG00000006463) vps37ba (ENSHCOG00000006443) abcb9 (ENSHCOG00000006437) zgc:113436 (ENSHCOG00000006433) ogfod2 (ENSHCOG00000006417) SLC4A5 (ENSHCOG00000006404) zgc:110329 (ENSHCOG00000006360) TACR1 (ENSHCOG00000006328) ncaph (ENSHCOG00000006311) vamp8 (ENSHCOG00000006207) #22 vamp5 (ENSHCOG00000006204) #23 GCN1 (ENSHCOG00000006181) rab35b (ENSHCOG00000006056) BICDL1 (ENSHCOG00000006046) CIT (ENSHCOG00000006028) mtmr3 (ENSHCOG00000005949) CUX2 (ENSHCOG00000005886) ENSHCOG00000005847 PPP1CA (ENSHCOG00000005828) pptc7a (ENSHCOG00000005805) ENSHCOG00000005783 ENSHCOG00000005765 anapc7 (ENSHCOG00000005762) ENSHCOG00000005728 ift81 (ENSHCOG00000005677) Pinecone sodierfish MODERN SPECIES 23 cyb561a3a (ENSMMDG00005008527) hdr (ENSMMDG00005008529) UNC5D (ENSMMDG00005008553) ENSMMDG00005009543 tm2d2 (ENSMMDG00005009575) ENSMMDG00005009578 ppp3cca (ENSMMDG00005009641) vps37ba (ENSMMDG00005013321) abcb9 (ENSMMDG00005013322) zgc:113436 (ENSMMDG00005013353) ogfod2 (ENSMMDG00005013355) SLC4A5 (ENSMMDG00005013372) zgc:110329 (ENSMMDG00005013455) TACR1 (ENSMMDG00005013458) ncaph (ENSMMDG00005013473) vamp8 (ENSMMDG00005013486) #22 vamp5 (ENSMMDG00005013489) #23 ENSMMDG00005013492 tmem150aa (ENSMMDG00005013498) #25 kcnv2b (ENSMMDG00005013499) ENSMMDG00005013501 rbp4l (ENSMMDG00005013504) IDUA (ENSMMDG00005013510) tnksb (ENSMMDG00005013528) piwil2 (ENSMMDG00005013665) ENSMMDG00005017020 atad1a (ENSMMDG00005017109) GALNT9 (ENSMMDG00005017117) ENSMMDG00005017121 FBRSL1 (ENSMMDG00005017124) chfr (ENSMMDG00005017160) Cod MODERN SPECIES 2 sfrp1a (ENSGMOG00000032784) ENSGMOG00000031662 ENSGMOG00000034244 ENSGMOG00000037010 tcima (ENSGMOG00000004303) adam28 (ENSGMOG00000004307) ppp3cca (ENSGMOG00000019285) vps37ba (ENSGMOG00000025735) abcb9 (ENSGMOG00000014194) zgc:113436 (ENSGMOG00000008167) ogfod2 (ENSGMOG00000008166) ENSGMOG00000008159 zgc:110329 (ENSGMOG00000013280) ENSGMOG00000016561 ncaph (ENSGMOG00000014171) vamp8 (ENSGMOG00000017292) #22 ENSGMOG00000019227 #24 ENSGMOG00000030064 ENSGMOG00000033670 ENSGMOG00000024162 TMEM150A (ENSGMOG00000016838) #25 ENSGMOG00000008843 ENSGMOG00000001245 ENSGMOG00000006629 bmp10 (ENSGMOG00000024803) ENSGMOG00000006611 cds2 (ENSGMOG00000002776) ENSGMOG00000000425 ENSGMOG00000023582 slc14a2 (ENSGMOG00000014019) lnpep (ENSGMOG00000016581) Protacanthopterygii ANCESTRAL SPECIES 93 ENSGT00940000155874.a ENSGT00390000000134.b.a ENSGT00940000159875 ENSGT00940000156888 ENSGT00390000003458 ENSGT00940000156716 ENSGT00940000166302.c ENSGT00950000183012.A.a.c.b ENSGT00940000155431.a ENSGT00940000164419 ENSGT00940000153974.B ENSGT00940000157488.g ENSGT00940000165233 ENSGT00940000153745.a.a ENSGT00390000004149 ENSGT00940000160325.b #22 ENSGT00730000111371 #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a ENSGT00390000014618.b.d ENSGT00390000014666.a ENSGT00940000167361 ENSGT00940000156279.e ENSGT00950000183015.A ENSGT00940000158877 ENSGT00940000165501 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000159299 ENSGT00440000033552 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 37 ENSGT00390000000134.b.a.a ENSGT00940000159875.c ENSGT00940000156888.e ENSGT00390000003458.f ENSGT00940000156716.db ENSGT00940000166302.c.a ENSGT00950000183012.A.a.c.b.c ENSGT00940000155431.a.c ENSGT00940000164419.e ENSGT00940000153974.B.g ENSGT00940000157488.g.a ENSGT00940000165233.f ENSGT00940000153745.a.a.f ENSGT00940000153232.a.b.b.k ENSGT00390000004149.k ENSGT00940000160325.b.s #22 ENSGT00730000111371.i #23 ENSGT00940000165973 ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a.c ENSGT00940000168407 ENSGT00390000014618.b.d.c ENSGT00390000014666.a.f ENSGT00940000167361.c ENSGT00940000156279.e.f ENSGT00950000183015.A.i ENSGT00940000158877.c ENSGT00940000165501.e.b ENSGT00940000159446.e.a ENSGT00730000111237.l ENSGT00940000159299.c Salmoninae_a ANCESTRAL SPECIES 10 ENSGT00390000000134.b.a.a ENSGT00940000159875.c ENSGT00940000156888.e ENSGT00390000003458.f ENSGT00940000156716.db ENSGT00940000166302.c.a ENSGT00950000183012.A.a.c.b.c ENSGT00940000155431.a.c ENSGT00940000164419.e ENSGT00940000153974.B.g ENSGT00940000157488.g.a ENSGT00940000165233.f ENSGT00940000153745.a.a.f ENSGT00940000153232.a.b.b.k ENSGT00390000004149.k ENSGT00940000160325.b.s #22 ENSGT00730000111371.i #23 ENSGT00940000165973 ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a.c ENSGT00940000168407 ENSGT00390000014618.b.d.c ENSGT00390000014666.a.f ENSGT00940000167361.c ENSGT00940000156279.e.f ENSGT00950000183015.A.i ENSGT00940000158877.c ENSGT00940000165501.e.b ENSGT00940000159446.e.a ENSGT00730000111237.l ENSGT00940000159299.c Salmo ANCESTRAL SPECIES ENSGT00390000000134.b.a.a ENSGT00940000159875.c ENSGT00940000156888.e ENSGT00390000003458.f ENSGT00940000156716.db ENSGT00940000166302.c.a ENSGT00950000183012.A.a.c.b.c ENSGT00940000155431.a.c ENSGT00940000164419.e ENSGT00940000153974.B.g ENSGT00940000157488.g.a ENSGT00940000165233.f ENSGT00940000153745.a.a.f ENSGT00940000153232.a.b.b.k ENSGT00390000004149.k ENSGT00940000160325.b.s #22 ENSGT00730000111371.i #23 ENSGT00940000176261.a ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a.c ENSGT00940000168407 ENSGT00390000014618.b.d.c ENSGT00390000014666.a.f ENSGT00940000167361.c ENSGT00940000156279.e.f ENSGT00950000183015.A.i ENSGT00940000158877.c ENSGT00940000165501.e.b ENSGT00940000159446.e.a ENSGT00730000111237.l ENSGT00940000159299.c Atlantic salmon MODERN SPECIES 16 GOLGA7 (ENSSSAG00000105336) sfrp1a (ENSSSAG00000074486) ZMAT4 (ENSSSAG00000074490) tcima (ENSSSAG00000093836) adam28 (ENSSSAG00000074523) ppp3cca (ENSSSAG00000075817) vps37ba (ENSSSAG00000089977) abcb9 (ENSSSAG00000080327) zgc:113436 (ENSSSAG00000092467) ogfod2 (ENSSSAG00000078461) ENSSSAG00000078543 ENSSSAG00000080086 ENSSSAG00000080087 casp3 (ENSSSAG00000080096) ncaph (ENSSSAG00000080102) vamp8 (ENSSSAG00000080123) #22 vamp5 (ENSSSAG00000095593) #23 ENSSSAG00000080131 TMEM150A (ENSSSAG00000097704) #25 ENSSSAG00000112716 ENSSSAG00000080188 ENSSSAG00000077598 ENSSSAG00000080198 ENSSSAG00000080206 ENSSSAG00000080234 ENSSSAG00000112711 ENSSSAG00000080241 zgc:65851 (ENSSSAG00000080297) ENSSSAG00000085309 add2 (ENSSSAG00000080372) hk2 (ENSSSAG00000080458) River trout MODERN SPECIES 19 sfrp1a (ENSSTUG00000015365) ZMAT4 (ENSSTUG00000015370) tcima (ENSSTUG00000015378) adam28 (ENSSTUG00000015402) ppp3cca (ENSSTUG00000016692) vps37ba (ENSSTUG00000017161) abcb9 (ENSSTUG00000017190) zgc:113436 (ENSSTUG00000017444) ogfod2 (ENSSTUG00000017455) SLC4A5 (ENSSTUG00000017536) ENSSTUG00000019993 zgc:110329 (ENSSTUG00000019996) TACR1 (ENSSTUG00000020015) CASP3 (ENSSTUG00000020090) ncaph (ENSSTUG00000020156) vamp8 (ENSSTUG00000020200) #22 vamp5 (ENSSTUG00000020218) #23 ENSSTUG00000020229 TMEM150A (ENSSTUG00000020241) #25 TIA1 (ENSSTUG00000020267) ENSSTUG00000020590 znf703 (ENSSTUG00000020831) ERLIN2 (ENSSTUG00000020866) ENSSTUG00000021370 bmp10 (ENSSTUG00000021377) arhgap25 (ENSSTUG00000021382) cds2 (ENSSTUG00000021397) zgc:65851 (ENSSTUG00000021451) ENSSTUG00000021590 snrnp27 (ENSSTUG00000021597) add2 (ENSSTUG00000021628) Oncorhynchus ANCESTRAL SPECIES ENSGT00390000000134.b.a.a ENSGT00940000159875.c ENSGT00940000156888.e ENSGT00390000003458.f ENSGT00940000156716.db ENSGT00940000166302.c.a ENSGT00950000183012.A.a.c.b.c ENSGT00940000155431.a.c ENSGT00940000164419.e ENSGT00940000153974.B.g ENSGT00940000157488.g.a ENSGT00940000165233.f ENSGT00940000153745.a.a.f ENSGT00940000153232.a.b.b.k ENSGT00390000004149.k ENSGT00940000160325.b.s #22 ENSGT00730000111371.i #23 ENSGT00940000165973 ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a.c ENSGT00940000168407 ENSGT00390000014618.b.d.c ENSGT00390000014666.a.f ENSGT00940000167361.c ENSGT00940000156279.e.f ENSGT00950000183015.A.i ENSGT00940000158877.c ENSGT00940000165501.e.b ENSGT00940000159446.e.a ENSGT00730000111237.l ENSGT00940000159299.c Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000000134.b.a.a ENSGT00940000159875.c ENSGT00940000156888.e ENSGT00390000003458.f ENSGT00940000156716.db ENSGT00940000166302.c.a ENSGT00950000183012.A.a.c.b.c ENSGT00940000155431.a.c ENSGT00940000164419.e ENSGT00940000153974.B.g ENSGT00940000157488.g.a ENSGT00940000165233.f ENSGT00940000153745.a.a.f ENSGT00940000153232.a.b.b.k ENSGT00390000004149.k ENSGT00940000160325.b.s #22 ENSGT00730000111371.i #23 ENSGT00940000165973 ENSGT01030000234578.A.b.a.a.b.e #25 ENSGT00940000154962.A.a.a.c ENSGT00940000168407 ENSGT00390000014618.b.d.c ENSGT00390000014666.a.f ENSGT00940000167361.c ENSGT00940000156279.e.f ENSGT00950000183015.A.i ENSGT00940000158877.c ENSGT00940000165501.e.b ENSGT00940000159446.e.a ENSGT00730000111237.l ENSGT00940000159299.c Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 28 sfrp1a (ENSOTSG00005031570) ZMAT4 (ENSOTSG00005031568) tcima (ENSOTSG00005031567) adam28 (ENSOTSG00005031165) ppp3cca (ENSOTSG00005026816) vps37ba (ENSOTSG00005026807) abcb9 (ENSOTSG00005026774) zgc:113436 (ENSOTSG00005026768) ENSOTSG00005026767 ogfod2 (ENSOTSG00005026766) SLC4A5 (ENSOTSG00005012463) zgc:110329 (ENSOTSG00005012424) TACR1 (ENSOTSG00005012422) CASP3 (ENSOTSG00005012418) ncaph (ENSOTSG00005012405) vamp8 (ENSOTSG00005012403) #22 vamp5 (ENSOTSG00005012399) #23 ENSOTSG00005012391 TMEM150A (ENSOTSG00005012388) #25 ENSOTSG00005012000 ENSOTSG00005011990 znf703 (ENSOTSG00005011988) ERLIN2 (ENSOTSG00005011931) ENSOTSG00005011928 bmp10 (ENSOTSG00005011926) arhgap25 (ENSOTSG00005011924) cds2 (ENSOTSG00005011849) zgc:65851 (ENSOTSG00005011657) ENSOTSG00005011652 add2 (ENSOTSG00005011621) hk2 (ENSOTSG00005007910) Chinook salmon MODERN SPECIES 28 sfrp1a (ENSOTSG00005027739) ZMAT4 (ENSOTSG00005027697) tcima (ENSOTSG00005046492) adam28 (ENSOTSG00005046461) ppp3cca (ENSOTSG00005046045) vps37ba (ENSOTSG00005046044) abcb9 (ENSOTSG00005045675) zgc:113436 (ENSOTSG00005045674) ENSOTSG00005045673 ogfod2 (ENSOTSG00005045672) SLC4A5 (ENSOTSG00005041854) zgc:110329 (ENSOTSG00005041811) TACR1 (ENSOTSG00005041808) CASP3 (ENSOTSG00005041807) ncaph (ENSOTSG00005041806) vamp8 (ENSOTSG00005041805) #22 vamp5 (ENSOTSG00005041804) #23 ENSOTSG00005041803 TMEM150A (ENSOTSG00005041802) #25 ENSOTSG00005041585 ENSOTSG00005041582 znf703 (ENSOTSG00005041581) ERLIN2 (ENSOTSG00005041453) ENSOTSG00005041448 bmp10 (ENSOTSG00005041447) arhgap25 (ENSOTSG00005041444) cds2 (ENSOTSG00005041296) zgc:65851 (ENSOTSG00005041285) ENSOTSG00005041284 add2 (ENSOTSG00005041279) hk2 (ENSOTSG00005035663) Coho salmon MODERN SPECIES 22 sfrp1a (ENSOKIG00005012572) ZMAT4 (ENSOKIG00005012557) tcima (ENSOKIG00005012552) adam28 (ENSOKIG00005008179) ppp3cca (ENSOKIG00005007503) vps37ba (ENSOKIG00005007457) abcb9 (ENSOKIG00005006573) zgc:113436 (ENSOKIG00005006505) ogfod2 (ENSOKIG00005006493) SLC4A5 (ENSOKIG00005003631) zgc:110329 (ENSOKIG00005003375) ENSOKIG00005003371 TACR1 (ENSOKIG00005003358) CASP3 (ENSOKIG00005003333) ncaph (ENSOKIG00005003316) vamp8 (ENSOKIG00005003308) #22 vamp5 (ENSOKIG00005003303) #23 ENSOKIG00005003293 TMEM150A (ENSOKIG00005003281) #25 ENSOKIG00005003274 ENSOKIG00005003242 ENSOKIG00005001827 znf703 (ENSOKIG00005001686) ERLIN2 (ENSOKIG00005001649) ENSOKIG00005001618 bmp10 (ENSOKIG00005001614) arhgap25 (ENSOKIG00005001609) cds2 (ENSOKIG00005001211) zgc:65851 (ENSOKIG00005001093) ENSOKIG00005001084 snrnp27 (ENSOKIG00005001078) Rainbow trout MODERN SPECIES 27 sfrp1a (ENSOMYG00000017455) ZMAT4 (ENSOMYG00000017439) tcima (ENSOMYG00000017435) adam28 (ENSOMYG00000016749) ppp3cca (ENSOMYG00000016439) vps37ba (ENSOMYG00000016415) abcb9 (ENSOMYG00000015976) zgc:113436 (ENSOMYG00000015948) ogfod2 (ENSOMYG00000015943) ENSOMYG00000008980 zgc:110329 (ENSOMYG00000006502) ENSOMYG00000006487 ENSOMYG00000056955 ENSOMYG00000006419 ncaph (ENSOMYG00000006152) vamp8 (ENSOMYG00000064629) #22 VAMP5 (ENSOMYG00000072485) #23 ENSOMYG00000005819 TMEM150A (ENSOMYG00000005811) #25 ENSOMYG00000048705 ENSOMYG00000005547 ENSOMYG00000004755 ENSOMYG00000004339 ENSOMYG00000003952 ENSOMYG00000003264 bmp10 (ENSOMYG00000003239) ENSOMYG00000003232 cds2 (ENSOMYG00000003017) zgc:65851 (ENSOMYG00000002902) ENSOMYG00000002856 add2 (ENSOMYG00000002827) Huchen MODERN SPECIES 813 zgc:110329 (ENSHHUG00000049356) TACR1 (ENSHHUG00000049334) CASP3 (ENSHHUG00000049327) ncaph (ENSHHUG00000049316) vamp8 (ENSHHUG00000049305) #22 vamp5 (ENSHHUG00000049304) #23 ENSHHUG00000049299 TMEM150A (ENSHHUG00000049293) #25 ENSHHUG00000049245 ENSHHUG00000049214 znf703 (ENSHHUG00000049210) ERLIN2 (ENSHHUG00000049136) ENSHHUG00000049131 bmp10 (ENSHHUG00000049127) arhgap25 (ENSHHUG00000049123) Salmoninae ANCESTRAL SPECIES 188 ENSGT00940000155874.a.h ENSGT00390000000134.b.a.b ENSGT00940000159875.d ENSGT00940000156888.f ENSGT00390000003458.e ENSGT00940000156716.eb ENSGT00940000166302.c.b ENSGT00950000183012.A.a.c.b.d ENSGT00940000155431.a.d ENSGT00940000164419.f ENSGT00940000153974.B.h ENSGT00940000157488.g.b ENSGT00940000165233.e ENSGT00940000153745.a.a.e ENSGT00390000004149.l ENSGT00940000160325.b.t #22 ENSGT00730000111371.j #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.f #25 ENSGT00530000063586.a.p ENSGT00940000154962.A.a.a.d ENSGT00390000014618.b.d.d ENSGT00390000014666.a.e ENSGT00940000167361.d ENSGT00940000156279.e.e ENSGT00950000183015.A.j ENSGT00940000158877.d ENSGT00940000165501.e.a ENSGT00940000159446.e.b ENSGT00730000111237.k ENSGT00940000159299.d.a.a Huchen MODERN SPECIES 615 loxl2b (ENSHHUG00000035849) GOLGA7 (ENSHHUG00000035819) sfrp1a (ENSHHUG00000035814) ZMAT4 (ENSHHUG00000035808) tcima (ENSHHUG00000035807) adam28 (ENSHHUG00000035749) ppp3cca (ENSHHUG00000035566) vps37ba (ENSHHUG00000035557) abcb9 (ENSHHUG00000035454) zgc:113436 (ENSHHUG00000035449) ogfod2 (ENSHHUG00000035444) SLC4A5 (ENSHHUG00000033218) zgc:110329 (ENSHHUG00000033163) TACR1 (ENSHHUG00000033138) ncaph (ENSHHUG00000033123) vamp8 (ENSHHUG00000033115) #22 vamp5 (ENSHHUG00000033111) #23 rnf181 (ENSHHUG00000033109) #24 TMEM150A (ENSHHUG00000033032) #25 ENSHHUG00000033026 ENSHHUG00000033015 Salmoninae_a ANCESTRAL SPECIES 31 ENSGT00940000155874.a.h ENSGT00390000000134.b.a.b ENSGT00940000159875.d ENSGT00940000156888.f ENSGT00390000003458.e ENSGT00940000156716.eb ENSGT00940000166302.c.b ENSGT00950000183012.A.a.c.b.d ENSGT00940000155431.a.d ENSGT00940000164419.f ENSGT00940000153974.B.h ENSGT00940000157488.g.b ENSGT00940000165233.e ENSGT00940000153745.a.a.e ENSGT00390000004149.l ENSGT00940000160325.b.t #22 ENSGT00730000111371.j #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.f #25 ENSGT00530000063586.a.p ENSGT00940000154962.A.a.a.d ENSGT00390000014618.b.d.d ENSGT00390000014666.a.e ENSGT00940000167361.d ENSGT00940000156279.e.e ENSGT00950000183015.A.j ENSGT00940000158877.d ENSGT00940000165501.e.a ENSGT00940000159446.e.b ENSGT00730000111237.k ENSGT00940000159299.d.a.a Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000155874.a.h ENSGT00390000000134.b.a.b ENSGT00940000159875.d ENSGT00940000156888.f ENSGT00390000003458.e ENSGT00940000156716.eb ENSGT00940000166302.c.b ENSGT00950000183012.A.a.c.b.d ENSGT00940000155431.a.d ENSGT00940000164419.f ENSGT00940000153974.B.h ENSGT00940000157488.g.b ENSGT00940000165233.e ENSGT00940000153745.a.a.e ENSGT00390000004149.l ENSGT00940000160325.b.t #22 ENSGT00730000111371.j #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.f #25 ENSGT00530000063586.a.p ENSGT00940000154962.A.a.a.d ENSGT00390000014618.b.d.d ENSGT00390000014666.a.e ENSGT00940000167361.d ENSGT00940000156279.e.e ENSGT00950000183015.A.j ENSGT00940000158877.d.a ENSGT00940000165501.e.a ENSGT00940000159446.e.b ENSGT00730000111237.k ENSGT00940000159299.d.a.a Oncorhynchus_a ANCESTRAL SPECIES 15 ENSGT00940000155874.a.h ENSGT00390000000134.b.a.b ENSGT00940000159875.d ENSGT00940000156888.f ENSGT00390000003458.e ENSGT00940000156716.eb ENSGT00940000166302.c.b ENSGT00950000183012.A.a.c.b.d ENSGT00940000155431.a.d ENSGT00940000164419.f ENSGT00940000153974.B.h ENSGT00940000157488.g.b ENSGT00940000165233.e ENSGT00940000153745.a.a.e ENSGT00390000004149.l ENSGT00940000160325.b.t #22 ENSGT00730000111371.j #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.f #25 ENSGT00530000063586.a.p ENSGT00940000154962.A.a.a.d ENSGT00390000014618.b.d.d ENSGT00390000014666.a.e ENSGT00940000167361.d ENSGT00940000156279.e.e ENSGT00950000183015.A.j ENSGT00940000158877.d.a ENSGT00940000165501.e.a ENSGT00940000159446.e.b ENSGT00730000111237.k ENSGT00940000159299.d.a.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 3 loxl2b (ENSOTSG00005040921) GOLGA7 (ENSOTSG00005041111) sfrp1a (ENSOTSG00005041113) ZMAT4 (ENSOTSG00005041114) tcima (ENSOTSG00005041116) adam28 (ENSOTSG00005041117) ppp3cca (ENSOTSG00005041207) vps37ba (ENSOTSG00005045126) abcb9 (ENSOTSG00005045127) zgc:113436 (ENSOTSG00005045128) ogfod2 (ENSOTSG00005045129) SLC4A5 (ENSOTSG00005045130) zgc:110329 (ENSOTSG00005045131) TACR1 (ENSOTSG00005045132) ncaph (ENSOTSG00005045133) vamp8 (ENSOTSG00005045134) #22 vamp5 (ENSOTSG00005045135) #23 rnf181 (ENSOTSG00005045136) #24 TMEM150A (ENSOTSG00005045137) #25 ENSOTSG00005045138 ENSOTSG00005045139 znf703 (ENSOTSG00005045140) ERLIN2 (ENSOTSG00005045143) ENSOTSG00005045653 bmp10 (ENSOTSG00005045654) arhgap25 (ENSOTSG00005045656) cds2 (ENSOTSG00005045658) zgc:65851 (ENSOTSG00005045707) MXD1 (ENSOTSG00005045708) ENSOTSG00005045710 add2 (ENSOTSG00005045711) Chinook salmon MODERN SPECIES 4 cyb561a3a (ENSOTSG00005040431) loxl2b (ENSOTSG00005040434) sfrp1a (ENSOTSG00005041275) ZMAT4 (ENSOTSG00005041276) tcima (ENSOTSG00005041277) adam28 (ENSOTSG00005041281) ppp3cca (ENSOTSG00005041341) vps37ba (ENSOTSG00005045148) abcb9 (ENSOTSG00005045149) zgc:113436 (ENSOTSG00005045151) ogfod2 (ENSOTSG00005045152) SLC4A5 (ENSOTSG00005045153) zgc:110329 (ENSOTSG00005045154) TACR1 (ENSOTSG00005045155) ncaph (ENSOTSG00005045156) vamp8 (ENSOTSG00005045158) #22 vamp5 (ENSOTSG00005045160) #23 rnf181 (ENSOTSG00005045161) #24 TMEM150A (ENSOTSG00005045163) #25 ENSOTSG00005045167 TIA1 (ENSOTSG00005045171) znf703 (ENSOTSG00005045173) ERLIN2 (ENSOTSG00005045178) ENSOTSG00005045223 bmp10 (ENSOTSG00005045225) arhgap25 (ENSOTSG00005045232) cds2 (ENSOTSG00005045236) zgc:65851 (ENSOTSG00005045437) MXD1 (ENSOTSG00005045439) ENSOTSG00005045441 add2 (ENSOTSG00005045442) Coho salmon MODERN SPECIES 28 cyb561a3a (ENSOKIG00005002488) loxl2b (ENSOKIG00005002528) sfrp1a (ENSOKIG00005002663) ZMAT4 (ENSOKIG00005002679) tcima (ENSOKIG00005002685) adam28 (ENSOKIG00005002748) ppp3cca (ENSOKIG00005003172) vps37ba (ENSOKIG00005003297) abcb9 (ENSOKIG00005003311) zgc:113436 (ENSOKIG00005003408) SLC4A5 (ENSOKIG00005003582) zgc:110329 (ENSOKIG00005004434) TACR1 (ENSOKIG00005004460) ENSOKIG00005004478 ncaph (ENSOKIG00005004492) vamp8 (ENSOKIG00005004529) #22 vamp5 (ENSOKIG00005004566) #23 rnf181 (ENSOKIG00005004584) #24 TMEM150A (ENSOKIG00005004594) #25 ENSOKIG00005004609 ENSOKIG00005004672 ENSOKIG00005004758 ENSOKIG00005004765 ZNF703 (ENSOKIG00005004771) ERLIN2 (ENSOKIG00005004865) ENSOKIG00005006527 ENSOKIG00005006533 CDS2 (ENSOKIG00005006616) zgc:65851 (ENSOKIG00005007615) MXD1 (ENSOKIG00005007622) snrnp27 (ENSOKIG00005007628) Rainbow trout MODERN SPECIES 2 ENSOMYG00000040973 tcima (ENSOMYG00000040971) adam28 (ENSOMYG00000040395) ppp3cca (ENSOMYG00000039597) ENSOMYG00000053106 ENSOMYG00000072942 vps37ba (ENSOMYG00000039185) abcb9 (ENSOMYG00000039149) zgc:113436 (ENSOMYG00000039121) ogfod2 (ENSOMYG00000039105) ENSOMYG00000038760 ENSOMYG00000062615 zgc:110329 (ENSOMYG00000038416) ENSOMYG00000038381 ncaph (ENSOMYG00000038307) vamp8 (ENSOMYG00000050611) #22 vamp5 (ENSOMYG00000038253) #23 ENSOMYG00000038232 TMEM150A (ENSOMYG00000038222) #25 ENSOMYG00000038207 ENSOMYG00000038185 ENSOMYG00000067945 ENSOMYG00000038151 ENSOMYG00000038096 ENSOMYG00000037983 bmp10 (ENSOMYG00000053126) ENSOMYG00000037974 cds2 (ENSOMYG00000037924) zgc:65851 (ENSOMYG00000037871) ENSOMYG00000076338 ENSOMYG00000037865 Salmo ANCESTRAL SPECIES 19 ENSGT00940000155874.a.h ENSGT00390000000134.b.a.b ENSGT00940000159875.d ENSGT00940000156888.f ENSGT00390000003458.e ENSGT00940000156716.eb ENSGT00940000166302.c.b ENSGT00950000183012.A.a.c.b.d ENSGT00940000155431.a.d ENSGT00940000164419.f ENSGT00940000153974.B.h ENSGT00940000157488.g.b ENSGT00940000165233.e ENSGT00940000153745.a.a.e ENSGT00390000004149.l ENSGT00940000160325.b.t #22 ENSGT00730000111371.j #23 ENSGT00940000160552 #24 ENSGT01030000234578.A.b.a.a.b.f #25 ENSGT00530000063586.a.p ENSGT00940000154962.A.a.a.d ENSGT00390000014618.b.d.d ENSGT00390000014666.a.e ENSGT00940000167361.d ENSGT00940000156279.e.e ENSGT00950000183015.A.j ENSGT00940000158877.d ENSGT00940000165501.e.a ENSGT00940000159446.e.b ENSGT00730000111237.k ENSGT00940000159299.d.b River trout MODERN SPECIES 39 cyb561a3a (ENSSTUG00000003805) loxl2b (ENSSTUG00000002637) GOLGA7 (ENSSTUG00000002564) sfrp1a (ENSSTUG00000002554) ZMAT4 (ENSSTUG00000002546) tcima (ENSSTUG00000002543) adam28 (ENSSTUG00000002143) ppp3cca (ENSSTUG00000001771) vps37ba (ENSSTUG00000001734) abcb9 (ENSSTUG00000001665) zgc:113436 (ENSSTUG00000001655) SLC4A5 (ENSSTUG00000001637) zgc:110329 (ENSSTUG00000001627) TACR1 (ENSSTUG00000001614) ncaph (ENSSTUG00000001600) vamp8 (ENSSTUG00000001597) #22 vamp5 (ENSSTUG00000001595) #23 rnf181 (ENSSTUG00000001593) #24 TMEM150A (ENSSTUG00000001589) #25 ENSSTUG00000001579 ENSSTUG00000001554 znf703 (ENSSTUG00000001542) ERLIN2 (ENSSTUG00000001492) ENSSTUG00000001482 bmp10 (ENSSTUG00000001478) cds2 (ENSSTUG00000001218) zgc:65851 (ENSSTUG00000001190) MXD1 (ENSSTUG00000001183) snrnp27 (ENSSTUG00000001175) add2 (ENSSTUG00000050817) figla (ENSSTUG00000050798) Northern pike MODERN SPECIES 12 loxl2b (ENSELUG00000004975) GOLGA7 (ENSELUG00000005025) sfrp1a (ENSELUG00000005064) ZMAT4 (ENSELUG00000005097) ppp3cca (ENSELUG00000005227) adam28 (ENSELUG00000005155) vps37ba (ENSELUG00000005261) abcb9 (ENSELUG00000005281) zgc:113436 (ENSELUG00000005292) ogfod2 (ENSELUG00000005305) SLC4A5 (ENSELUG00000005363) zgc:110329 (ENSELUG00000005403) TACR1 (ENSELUG00000005414) CASP3 (ENSELUG00000005491) ncaph (ENSELUG00000005541) vamp8 (ENSELUG00000005553) #22 vamp5 (ENSELUG00000030017) #23 rnf181 (ENSELUG00000005580) #24 tmem150aa (ENSELUG00000005596) #25 TIA1 (ENSELUG00000005615) ENSELUG00000005662 znf703 (ENSELUG00000005672) ERLIN2 (ENSELUG00000005699) ENSELUG00000005705 bmp10 (ENSELUG00000005713) arhgap25 (ENSELUG00000005727) cds2 (ENSELUG00000005751) zgc:65851 (ENSELUG00000005774) ENSELUG00000005790 snrnp27 (ENSELUG00000005829) add2 (ENSELUG00000005908) Reedfish MODERN SPECIES KCNIP3 (ENSECRG00000000201) zgc:152830 (ENSECRG00000000202) FAHD2A (ENSECRG00000000203) gpat2 (ENSECRG00000000204) adra2b (ENSECRG00000000205) ENSECRG00000000206 dusp2 (ENSECRG00000000207) pgam2 (ENSECRG00000000208) gmcl1 (ENSECRG00000000209) tgfa (ENSECRG00000000210) fam136a (ENSECRG00000000211) snrpg (ENSECRG00000000212) pcyox1 (ENSECRG00000000213) tmem150aa (ENSECRG00000000214) #25 rnf181 (ENSECRG00000000215) #24 vamp8 (ENSECRG00000000216) #22 ncaph (ENSECRG00000000217) pum3 (ENSECRG00000000218) ENSECRG00000000219 ENSECRG00000000220 ENSECRG00000000221 mrps24 (ENSECRG00000000222) nudcd3 (ENSECRG00000000223) zgc:65851 (ENSECRG00000000224) MXD1 (ENSECRG00000000225) snrnp27 (ENSECRG00000000226) add2 (ENSECRG00000000227) figla (ENSECRG00000000228) hk2 (ENSECRG00000000229) ENSECRG00000000230 tacr1b (ENSECRG00000000231) Elephant shark MODERN SPECIES 1671 ddx56 (ENSCMIG00000010148) NPC1L1 (ENSCMIG00000010165) ykt6 (ENSCMIG00000010212) ENSCMIG00000010225 ENSCMIG00000010281 kcnip3b (ENSCMIG00000010301) ENSCMIG00000010309 ENSCMIG00000010318 ENSCMIG00000010320 ENSCMIG00000010321 ENSCMIG00000010326 mat2ab (ENSCMIG00000010351) #20 si:ch211-283h6.4 (ENSCMIG00000010415) #26 usp39 (ENSCMIG00000010426) #27 GGCX (ENSCMIG00000010446) #21 vamp8 (ENSCMIG00000010449) #22 ENSCMIG00000010450 rnf181 (ENSCMIG00000010453) #24 tmem150aa (ENSCMIG00000010454) #25 ENSCMIG00000010458 ENSCMIG00000010459 ENSCMIG00000010460 OGDH (ENSCMIG00000010470) stard7 (ENSCMIG00000010550) ENSCMIG00000010552 dusp2 (ENSCMIG00000010553) ENSCMIG00000010556 stambpa (ENSCMIG00000010558) ENSCMIG00000010559 TCIRG1 (ENSCMIG00000010563) Gnathostomata ANCESTRAL SPECIES 201 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B ENSGT00940000156423 ENSGT00940000154827 ENSGT00940000160196 Euteleostomi ANCESTRAL SPECIES 57 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B ENSGT00940000156423 ENSGT00940000154827 ENSGT00940000160196 ENSGT00950000183003.a.a.a.a.a ENSGT00940000157778 Actinopterygii ANCESTRAL SPECIES 28 ENSGT00940000159608 ENSGT00940000155603.A.b.c ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B ENSGT00940000156423 ENSGT00940000154827 ENSGT00940000160196 ENSGT00950000183003.a.a.a.a.a ENSGT00940000157778 Neopterygii ANCESTRAL SPECIES 45 ENSGT00940000159608 ENSGT00940000155603.A.b.c ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000161622 ENSGT00510000047710 ENSGT00940000155967 ENSGT00940000156571 ENSGT00940000158733 ENSGT00940000158562 Osteoglossocephalai ANCESTRAL SPECIES 8 ENSGT00950000182908.A ENSGT00940000159608 ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000161622 ENSGT00940000158733 ENSGT00940000158562 Clupeocephala ANCESTRAL SPECIES 158 ENSGT00950000182908.A ENSGT00940000155603.A.a.a.a ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000161622 ENSGT00940000158733 ENSGT00940000158562 Otomorpha ANCESTRAL SPECIES 84 ENSGT00950000182908.A ENSGT00940000155603.A.a.a.a ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b Otophysi ANCESTRAL SPECIES 378 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b Cyprinoidei ANCESTRAL SPECIES 84 ENSGT00940000165521.a ENSGT00390000003050 ENSGT00390000009872 ENSGT00940000159886 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00940000163892.C.a.b ENSGT00940000158571 ENSGT00940000158875 ENSGT00940000161837.c.a.c.a ENSGT00940000161837.c.a.d ENSGT00950000183096.a.b ENSGT00940000158994 ENSGT00390000017923 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010.g.a ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000164013.b ENSGT00390000003175.a.b ENSGT00990000203922.f.b ENSGT00940000158245.ec.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000175401 ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000158196 Cyprininae ANCESTRAL SPECIES 186 ENSGT00940000158864.k.a.a.b ENSGT00940000165521.a.b ENSGT00390000009872.b ENSGT00940000159886.c ENSGT00940000158226.j.b ENSGT01050000244941.A.k ENSGT00940000163892.C.a.b.d ENSGT00940000158571.g.b ENSGT00940000158875.h ENSGT00940000161837.c.a.c.a ENSGT00950000183096.a.b.q.a ENSGT00940000158994.e ENSGT00390000017923.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010.g.a ENSGT00440000039914.z ENSGT00940000158010.h ENSGT00940000154426 ENSGT00440000039914.y.a ENSGT01030000234578.A.a.c ##25 ENSGT00940000164013.b ENSGT00390000003175.a.b.b ENSGT00990000203922.f.b ENSGT00940000158245.ec.a ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000175401 ENSGT00940000160540 ENSGT00940000157484.s Goldfish DUPLICATION Goldfish MODERN SPECIES 1 ENSCARG00000042320 tmem267 (ENSCARG00000042300) si:busm1-57f23.1 (ENSCARG00000042290) rassf6 (ENSCARG00000042260) MUSK (ENSCARG00000041995) lpar1 (ENSCARG00000041950) ENSCARG00000040926 GRIN3A (ENSCARG00000040807) PLPPR1 (ENSCARG00000040778) ENSCARG00000040769 ENSCARG00000040763 ENSCARG00000040712 SLC46A2 (ENSCARG00000040681) snx30 (ENSCARG00000040637) ENSCARG00000040626 si:ch73-234b20.5 (ENSCARG00000040571) ##22 HNRNPD (ENSCARG00000040446) hnrnpdl (ENSCARG00000040426) enoph1 (ENSCARG00000040408) TMEM150C (ENSCARG00000040374) ##25 ENSCARG00000039931 CDS2 (ENSCARG00000039903) sec31a (ENSCARG00000039407) zgc:113274 (ENSCARG00000039357) cdc42se2 (ENSCARG00000039339) sptlc1 (ENSCARG00000038916) ROR2 (ENSCARG00000038857) nfil3 (ENSCARG00000038836) auh (ENSCARG00000038716) ANKRD55 (ENSCARG00000038605) il6st (ENSCARG00000038511) Goldfish MODERN SPECIES 28 MUSK (ENSCARG00000017704) lpar1 (ENSCARG00000017648) ENSCARG00000017645 ENSCARG00000017638 ENSCARG00000015844 GRIN3A (ENSCARG00000015782) PLPPR1 (ENSCARG00000015772) ENSCARG00000015767 ENSCARG00000015761 ENSCARG00000015743 SLC46A2 (ENSCARG00000015736) ENSCARG00000015734 snx30 (ENSCARG00000015726) lyrm7 (ENSCARG00000015721) mat2al (ENSCARG00000015700) ##20 si:ch73-234b20.5 (ENSCARG00000015693) ##22 hnrnpd (ENSCARG00000015685) hnrnpdl (ENSCARG00000015682) enoph1 (ENSCARG00000070479) TMEM150C (ENSCARG00000070478) ##25 ENSCARG00000070477 ENSCARG00000070476 sec31a (ENSCARG00000070475) cdc42se2 (ENSCARG00000070469) sptlc1 (ENSCARG00000070455) ROR2 (ENSCARG00000070454) ENSCARG00000070453 nfil3 (ENSCARG00000070452) syk (ENSCARG00000070451) DIRAS2 (ENSCARG00000070449) ENSCARG00000070448 Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 298 ENSGT00950000183096.a.b.q.b ENSGT00940000158994.f ENSGT00390000017923.b ENSGT00940000160325.a.c ##22 ENSGT00940000158010.g.a ENSGT00440000039914.z ENSGT00940000158010.h ENSGT00940000154426 ENSGT00440000039914.y.a ENSGT01030000234578.A.a.c ##25 ENSGT00940000164013.b ENSGT00390000003175.a.b.b ENSGT00990000203922.f.b ENSGT00940000158245.ec.a ENSGT00550000074872 ENSGT00940000153947.A.f ENSGT00940000175401 ENSGT00940000153947.A.e ENSGT00940000160540 Common carp reference MODERN SPECIES 24 si:busm1-57f23.1 (ENSCCRG00000070997) ENSCCRG00000009062 lpar1 (ENSCCRG00000072551) ENSCCRG00000077456 ENSCCRG00000065669 ENSCCRG00000058040 ENSCCRG00000053999 ENSCCRG00000066975 ENSCCRG00000017746 ENSCCRG00000038865 ENSCCRG00000010624 palm2akap2 (ENSCCRG00000067902) ENSCCRG00000012616 snx30 (ENSCCRG00000009620) lyrm7 (ENSCCRG00000082670) si:ch73-234b20.5 (ENSCCRG00000077754) ##22 hnrnpd (ENSCCRG00000037389) enoph1 (ENSCCRG00000070398) TMEM150C (ENSCCRG00000037391) ##25 ENSCCRG00000037402 sec31a (ENSCCRG00000037440) zgc:113274 (ENSCCRG00000060743) SPTLC1 (ENSCCRG00000009276) ROR2 (ENSCCRG00000060844) nfil3 (ENSCCRG00000067998) ENSCCRG00000000897 AUH (ENSCCRG00000079592) ENSCCRG00000049609 il6st (ENSCCRG00000014461) ENSCCRG00000003183 st8sia4 (ENSCCRG00000002848) Golden-line barbel MODERN SPECIES 636 hnrnpd (ENSSGRG00000021752) si:ch73-234b20.5 (ENSSGRG00000021754) ##22 ENSSGRG00000021755 hnrnpdl (ENSSGRG00000021757) enoph1 (ENSSGRG00000021824) TMEM150C (ENSSGRG00000021827) ##25 TMEM150C (ENSSGRG00000021830) ##25 ENSSGRG00000021835 sec31a (ENSSGRG00000021854) CDC42SE2 (ENSSGRG00000022307) sptlc1 (ENSSGRG00000022308) ROR2 (ENSSGRG00000022309) auh (ENSSGRG00000022311) il6st (ENSSGRG00000022328) PAM (ENSSGRG00000022369) st8sia4 (ENSSGRG00000023488) ENSSGRG00000023490 Cyprininae_a ANCESTRAL SPECIES 500 ENSGT00390000009872.b ENSGT00940000159886.c ENSGT00940000158226.j.b ENSGT01050000244941.A.k ENSGT00940000163892.C.a.b.d ENSGT00940000158571.g.b ENSGT00940000158875.h ENSGT00940000161837.c.a.c.a.a ENSGT00940000161837.c.a.d ENSGT00950000183096.a.b.q.a ENSGT00940000158994.e ENSGT00390000017923.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a.d ##22 ENSGT00390000003175.a.b.a Golden-line barbel MODERN SPECIES 2001 lyrm7 (ENSSGRG00000018997) ENSSGRG00000018992 ##20 mat2al (ENSSGRG00000018955) ##20 si:ch73-234b20.5 (ENSSGRG00000018954) ##22 hnrnpd (ENSSGRG00000018931) hnrnpdl (ENSSGRG00000018929) enoph1 (ENSSGRG00000018921) ENSSGRG00000018920 ENSSGRG00000018919 Common carp reference MODERN SPECIES 32 ENSCCRG00000059997 ENSCCRG00000068638 ENSCCRG00000009925 ENSCCRG00000026732 ENSCCRG00000017751 ENSCCRG00000009705 palm2akap2 (ENSCCRG00000039612) ENSCCRG00000067885 snx30 (ENSCCRG00000039590) ENSCCRG00000061276 ENSCCRG00000072233 ENSCCRG00000062587 ENSCCRG00000071509 lyrm7 (ENSCCRG00000039588) mat2al (ENSCCRG00000054689) ##20 si:ch73-234b20.5 (ENSCCRG00000056330) ##22 hnrnpd (ENSCCRG00000017619) enoph1 (ENSCCRG00000068587) hnrnpdl (ENSCCRG00000063006) TMEM150C (ENSCCRG00000017620) ##25 ENSCCRG00000017621 ENSCCRG00000073332 ENSCCRG00000055716 sec31a (ENSCCRG00000009144) sptlc1 (ENSCCRG00000073416) ROR2 (ENSCCRG00000058752) ENSCCRG00000000251 nfil3 (ENSCCRG00000069614) auh (ENSCCRG00000058814) syk (ENSCCRG00000053057) DIRAS2 (ENSCCRG00000056500) Zebrafish MODERN SPECIES 1 ENSDARG00000063436 pla2g3 (ENSDARG00000008948) TTC28 (ENSDARG00000114920) pitpnb (ENSDARG00000036005) MN1 (ENSDARG00000076529) PLPPR1 (ENSDARG00000100642) ENSDARG00000075802 ENSDARG00000010729 PLK2 (ENSDARG00000090752) ENSDARG00000099005 palm2akap2 (ENSDARG00000069608) SLC46A2 (ENSDARG00000075229) snx30 (ENSDARG00000069601) lyrm7 (ENSDARG00000079815) mat2al (ENSDARG00000063665) ##20 si:ch73-234b20.5 (ENSDARG00000086996) ##22 hnrnpd (ENSDARG00000059246) hnrnpdl (ENSDARG00000003429) enoph1 (ENSDARG00000026198) TMEM150C (ENSDARG00000069590) ##25 ENSDARG00000091531 sec31a (ENSDARG00000021082) zgc:113274 (ENSDARG00000059235) ENSDARG00000093630 cdc42se2 (ENSDARG00000094577) sptlc1 (ENSDARG00000042995) ROR2 (ENSDARG00000076227) ENSDARG00000097088 nfil3 (ENSDARG00000042977) auh (ENSDARG00000042975) syk (ENSDARG00000008186) Characiphysae ANCESTRAL SPECIES 40 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000158994 ENSGT00950000183096.a.b ENSGT00940000161837.c.a ENSGT00940000158875 ENSGT00940000158571 ENSGT00940000163892.C.a.b ENSGT01050000244941.A ENSGT00940000158226 ENSGT00940000159886 Channel catfish MODERN SPECIES 7 pam (ENSIPUG00000001295) ppip5k2 (ENSIPUG00000001177) macir (ENSIPUG00000024986) lysc (ENSIPUG00000024982) ENSIPUG00000024978 Diras2 (ENSIPUG00000024977) syk (ENSIPUG00000024970) auh (ENSIPUG00000024969) nfil3 (ENSIPUG00000024968) ENSIPUG00000024967 ror2 (ENSIPUG00000024965) sptlc1 (ENSIPUG00000024961) cdc42se2 (ENSIPUG00000024960) lyrm7 (ENSIPUG00000024959) mat2al (ENSIPUG00000024958) ##20 VAMP8 (ENSIPUG00000024956) ##22 hnrnpd (ENSIPUG00000024954) hnrnpdl (ENSIPUG00000024951) enoph1 (ENSIPUG00000024949) Tmem150c (ENSIPUG00000024946) ##25 scd5 (ENSIPUG00000024944) sec31a (ENSIPUG00000024931) snx30 (ENSIPUG00000024925) SLC46A2 (ENSIPUG00000024922) ENSIPUG00000024917 ENSIPUG00000024914 lppr1 (ENSIPUG00000024909) GRIN3A (ENSIPUG00000024907) epha5 (ENSIPUG00000024902) Lpar1 (ENSIPUG00000024901) MUSK (ENSIPUG00000024897) Characiphysae_b ANCESTRAL SPECIES 36 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000158994 ENSGT00950000183096.a.b ENSGT00940000161837.c.a ENSGT00940000158875 ENSGT00940000158571 ENSGT00940000163892.C.a.b ENSGT01050000244941.A ENSGT00940000158226 ENSGT00940000159886 Characoidei ANCESTRAL SPECIES 29 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000158994 ENSGT00950000183096.a.b ENSGT00940000161837.c.a ENSGT00940000158875 ENSGT00940000158571 ENSGT00940000163892.C.a.b ENSGT01050000244941.A ENSGT00940000158226 ENSGT00940000159886 Red-bellied piranha MODERN SPECIES 368 ENSPNAG00000016253 mat2al (ENSPNAG00000016323) ##20 si:ch73-234b20.5 (ENSPNAG00000016334) ##22 hnrnpd (ENSPNAG00000016368) hnrnpdl (ENSPNAG00000016380) enoph1 (ENSPNAG00000016397) TMEM150C (ENSPNAG00000016455) ##25 SCD5 (ENSPNAG00000016482) sec31a (ENSPNAG00000016528) snx30 (ENSPNAG00000016540) SLC46A2 (ENSPNAG00000007114) SLC46A2 (ENSPNAG00000016555) ENSPNAG00000016606 PLPPR1 (ENSPNAG00000005876) GRIN3A (ENSPNAG00000016687) ENSPNAG00000016722 ENSPNAG00000016737 ENSPNAG00000016743 Mexicana tetra MODERN SPECIES 12 ENSAMXG00000031392 ENSAMXG00000042855 SH2D4A (ENSAMXG00000034670) slc38a9 (ENSAMXG00000010243) ddx4 (ENSAMXG00000010288) ENSAMXG00000010329 il6st (ENSAMXG00000040431) ANKRD55 (ENSAMXG00000010411) ENSAMXG00000030022 MAP3K1 (ENSAMXG00000010510) hmgcs1 (ENSAMXG00000039120) tln1 (ENSAMXG00000010531) tpm2 (ENSAMXG00000010165) ENSAMXG00000038469 mat2al (ENSAMXG00000001449) ##20 si:ch73-234b20.5 (ENSAMXG00000001464) ##22 hnrnpd (ENSAMXG00000001477) hnrnpdl (ENSAMXG00000001495) enoph1 (ENSAMXG00000035397) TMEM150C (ENSAMXG00000001521) ##25 SCD5 (ENSAMXG00000036335) sec31a (ENSAMXG00000001550) snx30 (ENSAMXG00000032117) SLC46A2 (ENSAMXG00000021281) ENSAMXG00000043048 ENSAMXG00000033093 PLPPR1 (ENSAMXG00000021269) GRIN3A (ENSAMXG00000021254) ENSAMXG00000021204 lpar1 (ENSAMXG00000040288) MUSK (ENSAMXG00000039697) Electric eel MODERN SPECIES 152 stc1l (ENSEEEG00000003578) ENSEEEG00000003575 wdr45 (ENSEEEG00000003110) zcchc9 (ENSEEEG00000003082) mat2al (ENSEEEG00000003078) ##20 si:ch73-234b20.5 (ENSEEEG00000003077) ##22 hnrnpd (ENSEEEG00000003071) hnrnpdl (ENSEEEG00000003047) enoph1 (ENSEEEG00000003039) TMEM150C (ENSEEEG00000003036) ##25 SCD5 (ENSEEEG00000002848) sec31a (ENSEEEG00000002729) snx30 (ENSEEEG00000002590) SLC46A2 (ENSEEEG00000002586) palm2akap2 (ENSEEEG00000002585) ENSEEEG00000002583 PLPPR1 (ENSEEEG00000002579) GRIN3A (ENSEEEG00000002578) ENSEEEG00000002576 lpar1 (ENSEEEG00000002572) MUSK (ENSEEEG00000002571) Clupeiformes ANCESTRAL SPECIES 3 ENSGT00950000182908.A ENSGT00940000155603.A.a.a.a ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 Denticle herring MODERN SPECIES 13 ANKRD55 (ENSDCDG00000028065) il6st (ENSDCDG00000028074) ENSDCDG00000028086 ddx4 (ENSDCDG00000028102) slc38a9 (ENSDCDG00000028127) ENSDCDG00000028172 ENSDCDG00000028200 fut10 (ENSDCDG00000029733) nrg1 (ENSDCDG00000029736) WRN (ENSDCDG00000029742) PURG (ENSDCDG00000029747) ENSDCDG00000029749 ppp2cb (ENSDCDG00000029752) ubxn8 (ENSDCDG00000029755) mat2al (ENSDCDG00000029764) ##20 si:ch73-234b20.5 (ENSDCDG00000029843) ##22 hnrnpd (ENSDCDG00000029845) si:ch211-243g18.2 (ENSDCDG00000029848) ndufa8 (ENSDCDG00000029853) morn5 (ENSDCDG00000029855) lhx6a (ENSDCDG00000029857) rbm18 (ENSDCDG00000029860) mrrf (ENSDCDG00000029862) ENSDCDG00000029864 anxa3b (ENSDCDG00000029887) paqr3b (ENSDCDG00000030066) antxr2b (ENSDCDG00000030072) rasgef1bb (ENSDCDG00000030082) ENSDCDG00000030132 snx18b (ENSDCDG00000030137) ARL15 (ENSDCDG00000030142) Euteleosteomorpha ANCESTRAL SPECIES 53 ENSGT00940000157897.a ENSGT00940000157648 ENSGT00940000153594.c.e.b ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.b ENSGT00940000164860.c ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00990000209055 ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000158733 ENSGT00940000158562 Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00990000209055 ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00990000209055 ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Ovalentaria ANCESTRAL SPECIES 16 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Pomacentridae ANCESTRAL SPECIES 12 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.b ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Amphiprion ANCESTRAL SPECIES 5 ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Clown anemonefish MODERN SPECIES 615 ENSAOCG00000001037 RILPL1 (ENSAOCG00000014917) kmt5aa (ENSAOCG00000001020) ENSAOCG00000001015 sbno1 (ENSAOCG00000014859) CDK2AP1 (ENSAOCG00000014778) MPHOSPH9 (ENSAOCG00000014755) PITPNM2 (ENSAOCG00000000970) ENSAOCG00000014605 ENSAOCG00000014590 ENSAOCG00000014539 ENSAOCG00000000951 KIF2A (ENSAOCG00000014410) ZSWIM6 (ENSAOCG00000014289) mat2al (ENSAOCG00000014248) ##20 si:ch73-234b20.5 (ENSAOCG00000014216) ##22 hnrnpd (ENSAOCG00000014191) enoph1 (ENSAOCG00000014154) Orange clownfish MODERN SPECIES 7 ENSAPEG00000006245 ENSAPEG00000006237 RILPL1 (ENSAPEG00000006199) kmt5aa (ENSAPEG00000006170) sbno1 (ENSAPEG00000006069) CDK2AP1 (ENSAPEG00000006040) MPHOSPH9 (ENSAPEG00000006011) ENSAPEG00000005956 ENSAPEG00000005926 ENSAPEG00000005915 PITPNM2 (ENSAPEG00000005833) KIF2A (ENSAPEG00000005760) ENSAPEG00000005741 ZSWIM6 (ENSAPEG00000005669) mat2al (ENSAPEG00000005632) ##20 si:ch73-234b20.5 (ENSAPEG00000005615) ##22 hnrnpd (ENSAPEG00000005603) enoph1 (ENSAPEG00000005547) TMEM150C (ENSAPEG00000005480) ##25 sec31a (ENSAPEG00000005330) ENSAPEG00000005226 lin54 (ENSAPEG00000005149) cops4 (ENSAPEG00000005079) plac8.1 (ENSAPEG00000005010) ADAMTS6 (ENSAPEG00000004933) cwc27 (ENSAPEG00000004904) ppwd1 (ENSAPEG00000004859) trim23 (ENSAPEG00000004822) mzt2b (ENSAPEG00000004797) ENSAPEG00000004780 lhx5 (ENSAPEG00000004769) Spiny chromis MODERN SPECIES 324 ZSWIM6 (ENSAPOG00000006311) mat2al (ENSAPOG00000006244) ##20 si:ch73-234b20.5 (ENSAPOG00000000172) ##22 hnrnpd (ENSAPOG00000006184) enoph1 (ENSAPOG00000006157) TMEM150C (ENSAPOG00000006128) ##25 sec31a (ENSAPOG00000006099) lin54 (ENSAPOG00000005944) cops4 (ENSAPOG00000000150) PLAC8 (ENSAPOG00000005824) ENSAPOG00000000144 ENSAPOG00000005800 PLAC8 (ENSAPOG00000005787) ADAMTS6 (ENSAPOG00000005762) cwc27 (ENSAPOG00000005662) ppwd1 (ENSAPOG00000005578) trim23 (ENSAPOG00000005524) mzt2b (ENSAPOG00000005465) Bicolor damselfish MODERN SPECIES 1797 mat2al (ENSSPAG00000020980) ##20 si:ch73-234b20.5 (ENSSPAG00000021001) ##22 hnrnpd (ENSSPAG00000021014) enoph1 (ENSSPAG00000021031) TMEM150C (ENSSPAG00000021046) ##25 sec31a (ENSSPAG00000021076) lin54 (ENSSPAG00000021218) cops4 (ENSSPAG00000021261) plac8.1 (ENSSPAG00000021299) ADAMTS6 (ENSSPAG00000021321) Cichlidae ANCESTRAL SPECIES 10 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Haplochromini ANCESTRAL SPECIES ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Burton s mouthbrooder MODERN SPECIES 1009 ZSWIM6 (ENSHBUG00000011756) mat2al (ENSHBUG00000011776) ##20 si:ch73-234b20.5 (ENSHBUG00000011783) ##22 hnrnpd (ENSHBUG00000011794) enoph1 (ENSHBUG00000011827) TMEM150C (ENSHBUG00000011859) ##25 sec31a (ENSHBUG00000012044) lin54 (ENSHBUG00000012118) cops4 (ENSHBUG00000012142) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00390000002172.B ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b P. nyererei MODERN SPECIES 297 ENSPNYG00000003773 ENSPNYG00000003789 ENSPNYG00000003810 denr (ENSPNYG00000003833) ENSPNYG00000003883 HIP1R (ENSPNYG00000003944) RILPL1 (ENSPNYG00000004220) kmt5aa (ENSPNYG00000004269) sbno1 (ENSPNYG00000004291) CDK2AP1 (ENSPNYG00000004423) MPHOSPH9 (ENSPNYG00000004444) PITPNM2 (ENSPNYG00000004501) KIF2A (ENSPNYG00000004708) ZSWIM6 (ENSPNYG00000004769) mat2al (ENSPNYG00000004824) ##20 si:ch73-234b20.5 (ENSPNYG00000004865) ##22 hnrnpd (ENSPNYG00000004884) enoph1 (ENSPNYG00000004899) TMEM150C (ENSPNYG00000004914) ##25 sec31a (ENSPNYG00000004982) lin54 (ENSPNYG00000005193) cops4 (ENSPNYG00000005262) ADAMTS6 (ENSPNYG00000005317) cwc27 (ENSPNYG00000005384) ppwd1 (ENSPNYG00000005473) trim23 (ENSPNYG00000005520) mzt2b (ENSPNYG00000005538) lhx5 (ENSPNYG00000005549) GCNT4 (ENSPNYG00000005563) ENSPNYG00000005572 hmgcrb (ENSPNYG00000005594) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00390000002172.B ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005008017 ENSMZEG00005008002 ENSMZEG00005007993 denr (ENSMZEG00005007982) ccdc62 (ENSMZEG00005007962) HIP1R (ENSMZEG00005007870) RILPL1 (ENSMZEG00005007818) kmt5aa (ENSMZEG00005007800) sbno1 (ENSMZEG00005007769) CDK2AP1 (ENSMZEG00005007739) MPHOSPH9 (ENSMZEG00005007706) PITPNM2 (ENSMZEG00005007677) KIF2A (ENSMZEG00005007647) ZSWIM6 (ENSMZEG00005007609) mat2al (ENSMZEG00005007580) ##20 si:ch73-234b20.5 (ENSMZEG00005007567) ##22 hnrnpd (ENSMZEG00005007558) enoph1 (ENSMZEG00005007539) TMEM150C (ENSMZEG00005007525) ##25 sec31a (ENSMZEG00005007385) lin54 (ENSMZEG00005007345) cops4 (ENSMZEG00005007315) plac8.1 (ENSMZEG00005007305) ADAMTS6 (ENSMZEG00005007248) cwc27 (ENSMZEG00005007217) ppwd1 (ENSMZEG00005007195) trim23 (ENSMZEG00005007146) mzt2b (ENSMZEG00005007140) lhx5 (ENSMZEG00005007128) GCNT4 (ENSMZEG00005007116) hmgcrb (ENSMZEG00005007061) Eastern happy DUPLICATION Eastern happy MODERN SPECIES 19 ENSACLG00000024762 ENSACLG00000024770 ENSACLG00000024783 denr (ENSACLG00000024786) ccdc62 (ENSACLG00000024796) HIP1R (ENSACLG00000024813) RILPL1 (ENSACLG00000024901) kmt5aa (ENSACLG00000024907) sbno1 (ENSACLG00000024913) CDK2AP1 (ENSACLG00000024940) ENSACLG00000024944 PITPNM2 (ENSACLG00000024946) KIF2A (ENSACLG00000025094) ZSWIM6 (ENSACLG00000025144) mat2al (ENSACLG00000025185) ##20 si:ch73-234b20.5 (ENSACLG00000025231) ##22 hnrnpd (ENSACLG00000025213) enoph1 (ENSACLG00000025238) TMEM150C (ENSACLG00000025250) ##25 sec31a (ENSACLG00000025274) lin54 (ENSACLG00000025384) cops4 (ENSACLG00000025422) plac8.1 (ENSACLG00000025459) ADAMTS6 (ENSACLG00000025480) ENSACLG00000025574 ENSACLG00000025619 cwc27 (ENSACLG00000025628) ppwd1 (ENSACLG00000025671) trim23 (ENSACLG00000025724) mzt2b (ENSACLG00000025764) lhx5 (ENSACLG00000025781) Eastern happy MODERN SPECIES 142 mat2al (ENSACLG00000026471) ##20 si:ch73-234b20.5 (ENSACLG00000026493) ##22 hnrnpd (ENSACLG00000026497) enoph1 (ENSACLG00000026506) Lyretail cichlid MODERN SPECIES 419 bcl7a (ENSNBRG00000018831) ENSNBRG00000018840 ENSNBRG00000018855 ENSNBRG00000018875 denr (ENSNBRG00000018898) ccdc62 (ENSNBRG00000018935) HIP1R (ENSNBRG00000019017) RILPL1 (ENSNBRG00000019084) kmt5aa (ENSNBRG00000019148) sbno1 (ENSNBRG00000019189) CDK2AP1 (ENSNBRG00000019255) PITPNM2 (ENSNBRG00000019267) KIF2A (ENSNBRG00000019346) ZSWIM6 (ENSNBRG00000019399) mat2al (ENSNBRG00000019485) ##20 si:ch73-234b20.5 (ENSNBRG00000019537) ##22 hnrnpd (ENSNBRG00000019548) enoph1 (ENSNBRG00000019572) TMEM150C (ENSNBRG00000019597) ##25 sec31a (ENSNBRG00000019633) lin54 (ENSNBRG00000019683) cops4 (ENSNBRG00000019754) plac8.1 (ENSNBRG00000019785) ADAMTS6 (ENSNBRG00000019825) cwc27 (ENSNBRG00000019906) ppwd1 (ENSNBRG00000019956) trim23 (ENSNBRG00000019976) mzt2b (ENSNBRG00000019985) lhx5 (ENSNBRG00000019994) GCNT4 (ENSNBRG00000020005) hmgcrb (ENSNBRG00000020016) Nile tilapia MODERN SPECIES 19 ENSONIG00000037058 ENSONIG00000031937 ENSONIG00000021001 denr (ENSONIG00000015319) ccdc62 (ENSONIG00000015323) ENSONIG00000015326 RILPL1 (ENSONIG00000015346) kmt5aa (ENSONIG00000032617) sbno1 (ENSONIG00000015348) CDK2AP1 (ENSONIG00000042866) MPHOSPH9 (ENSONIG00000015368) PITPNM2 (ENSONIG00000015369) KIF2A (ENSONIG00000015376) ZSWIM6 (ENSONIG00000015381) mat2al (ENSONIG00000015385) ##20 si:ch73-234b20.5 (ENSONIG00000015389) ##22 hnrnpd (ENSONIG00000015390) enoph1 (ENSONIG00000015392) TMEM150C (ENSONIG00000036344) ##25 sec31a (ENSONIG00000015395) lin54 (ENSONIG00000015402) cops4 (ENSONIG00000015405) plac8.1 (ENSONIG00000015410) ADAMTS6 (ENSONIG00000015412) cwc27 (ENSONIG00000015415) ppwd1 (ENSONIG00000015422) trim23 (ENSONIG00000015424) mzt2b (ENSONIG00000015425) lhx5 (ENSONIG00000015427) GCNT4 (ENSONIG00000015429) hmgcrb (ENSONIG00000015431) Midas cichlid MODERN SPECIES 633 ENSACIG00000007663 ENSACIG00000007676 ENSACIG00000007697 denr (ENSACIG00000007705) ccdc62 (ENSACIG00000007719) HIP1R (ENSACIG00000007758) RILPL1 (ENSACIG00000008024) kmt5aa (ENSACIG00000008046) sbno1 (ENSACIG00000008088) CDK2AP1 (ENSACIG00000008153) ENSACIG00000008166 PITPNM2 (ENSACIG00000008178) KIF2A (ENSACIG00000008231) ZSWIM6 (ENSACIG00000008279) mat2al (ENSACIG00000008315) ##20 si:ch73-234b20.5 (ENSACIG00000008334) ##22 hnrnpd (ENSACIG00000008353) enoph1 (ENSACIG00000008366) TMEM150C (ENSACIG00000008388) ##25 sec31a (ENSACIG00000008405) Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00390000002172.B ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00390000002172.B ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00390000011669 ENSGT00970000193629.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b NAME_4 ANCESTRAL SPECIES ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00390000011669 ENSGT00970000193629.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Mummichog MODERN SPECIES 2267 ENSFHEG00000007739 denr (ENSFHEG00000007729) ENSFHEG00000007683 HIP1R (ENSFHEG00000007666) fbxo18 (ENSFHEG00000007533) ENSFHEG00000007491 RILPL1 (ENSFHEG00000007463) kmt5aa (ENSFHEG00000007384) sbno1 (ENSFHEG00000007360) CDK2AP1 (ENSFHEG00000007190) MPHOSPH9 (ENSFHEG00000007151) PITPNM2 (ENSFHEG00000007121) KIF2A (ENSFHEG00000007066) ZSWIM6 (ENSFHEG00000006963) mat2al (ENSFHEG00000006874) ##20 si:ch73-234b20.5 (ENSFHEG00000006846) ##22 hnrnpd (ENSFHEG00000006838) enoph1 (ENSFHEG00000006792) sec31a (ENSFHEG00000006753) lin54 (ENSFHEG00000006513) cops4 (ENSFHEG00000006500) plac8.1 (ENSFHEG00000006414) ADAMTS6 (ENSFHEG00000006381) cwc27 (ENSFHEG00000006320) ppwd1 (ENSFHEG00000006293) trim23 (ENSFHEG00000000170) mzt2b (ENSFHEG00000006201) lhx5 (ENSFHEG00000006182) ENSFHEG00000006150 GCNT4 (ENSFHEG00000006132) hmgcrb (ENSFHEG00000006120) Sheepshead minnow MODERN SPECIES 1312 mat2al (ENSCVAG00000019776) ##20 si:ch73-234b20.5 (ENSCVAG00000019787) ##22 hnrnpd (ENSCVAG00000019790) enoph1 (ENSCVAG00000019827) TMEM150C (ENSCVAG00000019856) ##25 TMEM150C (ENSCVAG00000019861) ##25 sec31a (ENSCVAG00000020042) lin54 (ENSCVAG00000020124) cops4 (ENSCVAG00000020185) plac8.1 (ENSCVAG00000020195) Poeciliinae ANCESTRAL SPECIES 12 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00940000155122.b ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00390000011669 ENSGT00970000193629.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Poecilia ANCESTRAL SPECIES 12 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00940000155122.b ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00390000011669 ENSGT00970000193629.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b NAME_6 ANCESTRAL SPECIES 172 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00940000155122.b ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00390000011669 ENSGT00970000193629.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 Amazon molly MODERN SPECIES 519 ENSPFOG00000024326 ENSPFOG00000006691 ENSPFOG00000022537 HIP1R (ENSPFOG00000006168) fbxo18 (ENSPFOG00000005889) RILPL1 (ENSPFOG00000005790) kmt5aa (ENSPFOG00000005772) sbno1 (ENSPFOG00000005069) CDK2AP1 (ENSPFOG00000004970) MPHOSPH9 (ENSPFOG00000004848) MPHOSPH9 (ENSPFOG00000004735) PITPNM2 (ENSPFOG00000003953) ENSPFOG00000003556 ZSWIM6 (ENSPFOG00000002966) mat2al (ENSPFOG00000002817) ##20 si:ch73-234b20.5 (ENSPFOG00000022605) ##22 hnrnpd (ENSPFOG00000002596) enoph1 (ENSPFOG00000002471) TMEM150C (ENSPFOG00000002468) ##25 sec31a (ENSPFOG00000002042) lin54 (ENSPFOG00000001836) cops4 (ENSPFOG00000001653) plac8.1 (ENSPFOG00000001599) ADAMTS6 (ENSPFOG00000001100) cwc27 (ENSPFOG00000000765) ppwd1 (ENSPFOG00000000543) trim23 (ENSPFOG00000000449) mzt2b (ENSPFOG00000000429) ENSPFOG00000020037 ENSPFOG00000020036 lhx5 (ENSPFOG00000000403) Sailfin molly MODERN SPECIES 1478 ENSPLAG00000004164 KIF2A (ENSPLAG00000004206) ZSWIM6 (ENSPLAG00000004234) mat2al (ENSPLAG00000004264) ##20 si:ch73-234b20.5 (ENSPLAG00000004283) ##22 hnrnpd (ENSPLAG00000004297) enoph1 (ENSPLAG00000004310) TMEM150C (ENSPLAG00000004366) ##25 sec31a (ENSPLAG00000004447) lin54 (ENSPLAG00000004475) cops4 (ENSPLAG00000004498) Guppy MODERN SPECIES 442 ENSPREG00000017256 ccdc62 (ENSPREG00000017283) ENSPREG00000017352 HIP1R (ENSPREG00000017426) fbxo18 (ENSPREG00000017674) ENSPREG00000017695 RILPL1 (ENSPREG00000017717) kmt5aa (ENSPREG00000017727) sbno1 (ENSPREG00000017746) CDK2AP1 (ENSPREG00000017829) MPHOSPH9 (ENSPREG00000017844) PITPNM2 (ENSPREG00000017883) ENSPREG00000017971 ZSWIM6 (ENSPREG00000018037) mat2al (ENSPREG00000018065) ##20 si:ch73-234b20.5 (ENSPREG00000018075) ##22 hnrnpd (ENSPREG00000018081) enoph1 (ENSPREG00000018093) TMEM150C (ENSPREG00000018106) ##25 sec31a (ENSPREG00000018133) lin54 (ENSPREG00000018198) cops4 (ENSPREG00000018229) plac8.1 (ENSPREG00000018260) ADAMTS6 (ENSPREG00000018308) ENSPREG00000018347 cwc27 (ENSPREG00000018364) ppwd1 (ENSPREG00000018430) trim23 (ENSPREG00000018458) mzt2b (ENSPREG00000018479) lhx5 (ENSPREG00000018491) GCNT4 (ENSPREG00000018502) Platyfish MODERN SPECIES 22 ENSXMAG00000023484 ENSXMAG00000027377 ENSXMAG00000019237 HIP1R (ENSXMAG00000019203) fbxo18 (ENSXMAG00000019200) ENSXMAG00000022072 RILPL1 (ENSXMAG00000002132) kmt5aa (ENSXMAG00000002138) sbno1 (ENSXMAG00000002140) CDK2AP1 (ENSXMAG00000021983) MPHOSPH9 (ENSXMAG00000019189) PITPNM2 (ENSXMAG00000019185) KIF2A (ENSXMAG00000000740) ZSWIM6 (ENSXMAG00000019169) mat2al (ENSXMAG00000019163) ##20 si:ch73-234b20.5 (ENSXMAG00000021022) ##22 enoph1 (ENSXMAG00000019149) hnrnpd (ENSXMAG00000019151) TMEM150C (ENSXMAG00000029119) ##25 sec31a (ENSXMAG00000019118) lin54 (ENSXMAG00000019104) cops4 (ENSXMAG00000019092) plac8.1 (ENSXMAG00000021018) ADAMTS6 (ENSXMAG00000019046) ENSXMAG00000028220 cwc27 (ENSXMAG00000019028) ppwd1 (ENSXMAG00000019013) trim23 (ENSXMAG00000019005) mzt2b (ENSXMAG00000019000) lhx5 (ENSXMAG00000025364) GCNT4 (ENSXMAG00000023542) Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Mangrove rivulus MODERN SPECIES 584 ZSWIM6 (ENSKMAG00000004451) ENSKMAG00000004415 mat2al (ENSKMAG00000004378) ##20 si:ch73-234b20.5 (ENSKMAG00000004360) ##22 hnrnpd (ENSKMAG00000004310) Oryzias ANCESTRAL SPECIES 9 ENSGT01030000234539.b.b.a.i ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000180550 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h Oryzias_b ANCESTRAL SPECIES 4 ENSGT01030000234539.b.b.a.i ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Javanese ricefish MODERN SPECIES 3 ENSOJAG00000012915 ENSOJAG00000012799 ZMIZ2 (ENSOJAG00000012581) ENSOJAG00000012547 ENSOJAG00000012527 denr (ENSOJAG00000012408) ccdc62 (ENSOJAG00000012384) ccdc62 (ENSOJAG00000012362) RILPL1 (ENSOJAG00000012157) kmt5aa (ENSOJAG00000012131) ENSOJAG00000010455 ENSOJAG00000010435 ENSOJAG00000010311 ZSWIM6 (ENSOJAG00000009483) mat2al (ENSOJAG00000009024) ##20 si:ch73-234b20.5 (ENSOJAG00000008982) ##22 hnrnpd (ENSOJAG00000008964) ENOPH1 (ENSOJAG00000008954) TMEM150C (ENSOJAG00000008930) ##25 sec31a (ENSOJAG00000008250) lin54 (ENSOJAG00000008114) cops4 (ENSOJAG00000008081) plac8.1 (ENSOJAG00000008053) ADAMTS6 (ENSOJAG00000007539) cwc27 (ENSOJAG00000007407) ppwd1 (ENSOJAG00000007397) trim23 (ENSOJAG00000007342) mzt2b (ENSOJAG00000007325) lhx5 (ENSOJAG00000007311) GCNT4 (ENSOJAG00000007303) hmgcrb (ENSOJAG00000007200) Indian medaka MODERN SPECIES 30 ENSOMEG00000021883 ENSOMEG00000021873 ENSOMEG00000021864 denr (ENSOMEG00000021836) ccdc62 (ENSOMEG00000021753) HIP1R (ENSOMEG00000021109) RILPL1 (ENSOMEG00000019394) kmt5aa (ENSOMEG00000019347) sbno1 (ENSOMEG00000019313) CDK2AP1 (ENSOMEG00000019254) MPHOSPH9 (ENSOMEG00000019226) PITPNM2 (ENSOMEG00000019058) ENSOMEG00000018764 ZSWIM6 (ENSOMEG00000018660) mat2al (ENSOMEG00000018599) ##20 si:ch73-234b20.5 (ENSOMEG00000018572) ##22 hnrnpd (ENSOMEG00000018558) enoph1 (ENSOMEG00000018534) TMEM150C (ENSOMEG00000018506) ##25 sec31a (ENSOMEG00000018435) lin54 (ENSOMEG00000018289) cops4 (ENSOMEG00000000468) ENSOMEG00000018208 ADAMTS6 (ENSOMEG00000018187) cwc27 (ENSOMEG00000018078) ENSOMEG00000018032 ppwd1 (ENSOMEG00000017997) trim23 (ENSOMEG00000017937) mzt2b (ENSOMEG00000017910) lhx5 (ENSOMEG00000017880) hmgcrb (ENSOMEG00000017841) Oryzias_a ANCESTRAL SPECIES 12 ENSGT01030000234539.b.b.a.i ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00950000183185.c.b.a ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000180550 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000181707 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000001483 ENSORLG00000024996 denr (ENSORLG00000001495) ENSORLG00000029471 ENSORLG00000001544 ENSORLG00000021982 RILPL1 (ENSORLG00000001553) kmt5aa (ENSORLG00000001558) sbno1 (ENSORLG00000001593) CDK2AP1 (ENSORLG00000029235) MPHOSPH9 (ENSORLG00000029246) PITPNM2 (ENSORLG00000001638) ENSORLG00000001697 ENSORLG00000001735 mat2al (ENSORLG00000001777) ##20 si:ch73-234b20.5 (ENSORLG00000029060) ##22 hnrnpd (ENSORLG00000001833) ENOPH1 (ENSORLG00000001846) TMEM150C (ENSORLG00000030448) ##25 sec31a (ENSORLG00000001874) lin54 (ENSORLG00000001906) cops4 (ENSORLG00000001924) plac8.1 (ENSORLG00000024268) ENSORLG00000025212 ADAMTS6 (ENSORLG00000001971) cwc27 (ENSORLG00000001991) ENSORLG00000030025 ppwd1 (ENSORLG00000002002) trim23 (ENSORLG00000002016) mzt2b (ENSORLG00000002030) lhx5 (ENSORLG00000002044) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000155411.d ENSGT00940000157492.a ENSGT00940000157995 ENSGT00940000159267 ENSGT00940000156102.r ENSGT00940000166544.a ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Anabantoidei ANCESTRAL SPECIES 16 ENSGT00940000155411.d ENSGT00940000157492.a ENSGT00940000157995 ENSGT00940000159267 ENSGT00940000156102.r ENSGT00940000166544.a ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT01030000234578.A.a.e.a.a ##25 ENSGT00440000039914 ENSGT01030000234578.A.a.e.b ##25 ENSGT01030000234578.A.a.f ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 Climbing perch MODERN SPECIES 3 ENSATEG00000006369 ENSATEG00000006498 ENSATEG00000006512 ENSATEG00000006557 ENSATEG00000006578 vcanb (ENSATEG00000006644) xrcc4 (ENSATEG00000026220) SBNO1 (ENSATEG00000006667) CDK2AP1 (ENSATEG00000006721) MPHOSPH9 (ENSATEG00000006746) PITPNM2 (ENSATEG00000006764) ENSATEG00000006887 ENSATEG00000006972 ENSATEG00000007036 mat2al (ENSATEG00000007046) ##20 ENSATEG00000027999 ##22 hnrnpd (ENSATEG00000007097) ENSATEG00000007235 ##25 ENSATEG00000007131 TMEM150C (ENSATEG00000007228) ##25 TMEM150C (ENSATEG00000026913) ##25 TMEM150C (ENSATEG00000007266) ##25 SEC31A (ENSATEG00000007271) TMEM150C (ENSATEG00000026625) ##25 TMEM150C (ENSATEG00000007347) ##25 lin54 (ENSATEG00000007360) COPS4 (ENSATEG00000007411) plac8.1 (ENSATEG00000026599) ENSATEG00000007479 ENSATEG00000007557 ENSATEG00000007567 Siamese fighting fish MODERN SPECIES 3 SEPTIN5 (ENSBSLG00000015436) ENSBSLG00000015078 ENSBSLG00000015057 cetn3 (ENSBSLG00000015046) HAPLN1 (ENSBSLG00000015041) ENSBSLG00000015039 ENSBSLG00000015025 xrcc4 (ENSBSLG00000015016) sbno1 (ENSBSLG00000012775) CDK2AP1 (ENSBSLG00000012732) ENSBSLG00000012729 ENSBSLG00000012721 PITPNM2 (ENSBSLG00000012629) KIF2A (ENSBSLG00000012547) ZSWIM6 (ENSBSLG00000011542) si:ch73-234b20.5 (ENSBSLG00000011518) ##22 hnrnpd (ENSBSLG00000011494) ENSBSLG00000011486 ##25 ENSBSLG00000011481 enoph1 (ENSBSLG00000011476) TMEM150C (ENSBSLG00000011471) ##25 TMEM150C (ENSBSLG00000011466) ##25 TMEM150C (ENSBSLG00000011460) ##25 ENSBSLG00000011448 sec31a (ENSBSLG00000011084) lin54 (ENSBSLG00000010851) cops4 (ENSBSLG00000010561) plac8.1 (ENSBSLG00000010554) ADAMTS6 (ENSBSLG00000010290) cwc27 (ENSBSLG00000010217) trim23 (ENSBSLG00000009671) Zig-zag eel MODERN SPECIES 3 ENSMAMG00000005950 vcanb (ENSMAMG00000005922) xrcc4 (ENSMAMG00000024660) ENSMAMG00000025349 ENSMAMG00000028067 ENSMAMG00000024362 ENSMAMG00000027057 SBNO1 (ENSMAMG00000005473) CDK2AP1 (ENSMAMG00000005443) MPHOSPH9 (ENSMAMG00000005376) PITPNM2 (ENSMAMG00000005324) ENSMAMG00000005289 ENSMAMG00000005237 ENSMAMG00000005201 mat2al (ENSMAMG00000005162) ##20 si:ch73-234b20.5 (ENSMAMG00000005144) ##22 hnrnpd (ENSMAMG00000004971) ENOPH1 (ENSMAMG00000027525) TMEM150C (ENSMAMG00000004946) ##25 sec31a (ENSMAMG00000004874) lin54 (ENSMAMG00000004854) COPS4 (ENSMAMG00000004815) plac8.1 (ENSMAMG00000004799) ENSMAMG00000004760 ENSMAMG00000004661 ENSMAMG00000004609 ENSMAMG00000004557 mzt2b (ENSMAMG00000004537) ENSMAMG00000004519 GCNT4 (ENSMAMG00000004514) ENSMAMG00000004461 Carangaria ANCESTRAL SPECIES 17 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Carangaria_A ANCESTRAL SPECIES 18 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Seriola ANCESTRAL SPECIES 53 ENSGT00940000163584.a ENSGT00940000157242.a.b ENSGT00950000182815.a.a.b.g ENSGT00940000165531.b.b ENSGT00950000183197.b.a.b ENSGT00390000015280 ENSGT00940000158321 ENSGT00950000183171.A.b.a.a ENSGT00940000159526 ENSGT00730000110872.a.tb ENSGT00940000156399 ENSGT00940000155553.e.a ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 Yellowtail amberjack MODERN SPECIES 3042 tnfrsfa (ENSSLDG00000016532) ENSSLDG00000016520 trappc13 (ENSSLDG00000016461) sgtb (ENSSLDG00000016416) nln (ENSSLDG00000016400) erbin (ENSSLDG00000016321) ENSSLDG00000016285 ENSSLDG00000016213 pik3r1 (ENSSLDG00000016135) ZSWIM6 (ENSSLDG00000016063) ahr2 (ENSSLDG00000016033) mat2al (ENSSLDG00000016008) ##20 si:ch73-234b20.5 (ENSSLDG00000015994) ##22 hnrnpd (ENSSLDG00000015962) dab2 (ENSSLDG00000015916) c9 (ENSSLDG00000015864) gas1b (ENSSLDG00000015854) fbp1b (ENSSLDG00000015834) ENSSLDG00000015805 ENSSLDG00000015787 NPFFR2 (ENSSLDG00000015760) SLC4A4 (ENSSLDG00000015570) dck (ENSSLDG00000015520) mob1bb (ENSSLDG00000015512) mrps2 (ENSSLDG00000015489) olfm1a (ENSSLDG00000015461) COL5A1 (ENSSLDG00000015379) FNBP1 (ENSSLDG00000015269) Greater amberjack MODERN SPECIES 261 tnfrsfa (ENSSDUG00000010104) CYB561A3 (ENSSDUG00000010122) trappc13 (ENSSDUG00000010162) sgtb (ENSSDUG00000010220) sgtb (ENSSDUG00000010248) nln (ENSSDUG00000010276) erbin (ENSSDUG00000010319) ENSSDUG00000010395 ENSSDUG00000010414 ENSSDUG00000010433 MAST4 (ENSSDUG00000010544) pik3r1 (ENSSDUG00000010574) ZSWIM6 (ENSSDUG00000010650) ahr2 (ENSSDUG00000010731) mat2al (ENSSDUG00000010753) ##20 si:ch73-234b20.5 (ENSSDUG00000010784) ##22 hnrnpd (ENSSDUG00000010792) Barramundi perch MODERN SPECIES 619 ENSLCAG00010008129 mat2al (ENSLCAG00010008118) ##20 si:ch73-234b20.5 (ENSLCAG00010008113) ##22 hnrnpd (ENSLCAG00010008100) enoph1 (ENSLCAG00010008091) TMEM150C (ENSLCAG00010008081) ##25 sec31a (ENSLCAG00010008043) lin54 (ENSLCAG00010007953) cops4 (ENSLCAG00010007894) PLAC8 (ENSLCAG00010007877) Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00550000074969 ENSGT00550000074853 ENSGT00390000002172.B ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Tongue sole MODERN SPECIES 5 ENSCSEG00000010396 mdh1b (ENSCSEG00000010427) retreg2 (ENSCSEG00000010438) ENSCSEG00000010452 cnppd1 (ENSCSEG00000010476) abcb6a (ENSCSEG00000010487) pard3ba (ENSCSEG00000010523) nrp2a (ENSCSEG00000010558) ENSCSEG00000010808 mbnl2 (ENSCSEG00000010815) ENSCSEG00000010847 mrpl39 (ENSCSEG00000010854) jam2a (ENSCSEG00000010875) atp5pf (ENSCSEG00000010884) ZSWIM6 (ENSCSEG00000010893) si:ch73-234b20.5 (ENSCSEG00000010922) ##22 hnrnpd (ENSCSEG00000010909) enoph1 (ENSCSEG00000010924) sec31a (ENSCSEG00000010931) lin54 (ENSCSEG00000011040) cops4 (ENSCSEG00000011083) plac8.1 (ENSCSEG00000011107) ADAMTS6 (ENSCSEG00000011127) cwc27 (ENSCSEG00000011251) ppwd1 (ENSCSEG00000011265) trim23 (ENSCSEG00000011286) mzt2b (ENSCSEG00000011312) lhx5 (ENSCSEG00000011321) GCNT4 (ENSCSEG00000011334) hmgcrb (ENSCSEG00000011342) CERT1 (ENSCSEG00000011385) Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Tetraodontidae ANCESTRAL SPECIES 19 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b ENSGT00940000155123.b.b Tetraodon MODERN SPECIES 19 bcl7a (ENSTNIG00000013513) ENSTNIG00000013512 ENSTNIG00000013511 denr (ENSTNIG00000013510) HIP1R (ENSTNIG00000013509) RILPL1 (ENSTNIG00000013508) kmt5aa (ENSTNIG00000013507) sbno1 (ENSTNIG00000013506) ENSTNIG00000001702 CDK2AP1 (ENSTNIG00000000325) MPHOSPH9 (ENSTNIG00000013505) PITPNM2 (ENSTNIG00000013504) ENSTNIG00000013503 ZSWIM6 (ENSTNIG00000013502) mat2al (ENSTNIG00000013501) ##20 si:ch73-234b20.5 (ENSTNIG00000013500) ##22 hnrnpd (ENSTNIG00000013499) enoph1 (ENSTNIG00000013498) sec31a (ENSTNIG00000013497) lin54 (ENSTNIG00000013496) cops4 (ENSTNIG00000013495) plac8.1 (ENSTNIG00000013494) ADAMTS6 (ENSTNIG00000013493) cwc27 (ENSTNIG00000013492) ppwd1 (ENSTNIG00000013491) trim23 (ENSTNIG00000013490) lhx5 (ENSTNIG00000013489) GCNT4 (ENSTNIG00000013488) hmgcrb (ENSTNIG00000013487) CERT1 (ENSTNIG00000013486) SV2C (ENSTNIG00000013485) Fugu MODERN SPECIES 18 ddx55 (ENSTRUG00000018525) eif2b1 (ENSTRUG00000018520) ENSTRUG00000024096 ENSTRUG00000018511 denr (ENSTRUG00000020621) ccdc62 (ENSTRUG00000022161) RILPL1 (ENSTRUG00000018499) kmt5aa (ENSTRUG00000018497) sbno1 (ENSTRUG00000018490) CDK2AP1 (ENSTRUG00000025872) MPHOSPH9 (ENSTRUG00000018487) ENSTRUG00000018472 ZSWIM6 (ENSTRUG00000018464) ENSTRUG00000018462 mat2al (ENSTRUG00000018457) ##20 si:ch73-234b20.5 (ENSTRUG00000023648) ##22 hnrnpd (ENSTRUG00000018450) enoph1 (ENSTRUG00000018448) sec31a (ENSTRUG00000018434) lin54 (ENSTRUG00000018428) cops4 (ENSTRUG00000018422) plac8 (ENSTRUG00000027976) ADAMTS6 (ENSTRUG00000018410) cwc27 (ENSTRUG00000018406) ppwd1 (ENSTRUG00000018397) trim23 (ENSTRUG00000018393) mzt2b (ENSTRUG00000020389) lhx5 (ENSTRUG00000018387) GCNT4 (ENSTRUG00000018386) hmgcrb (ENSTRUG00000018375) CERT1 (ENSTRUG00000018369) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Gilthead seabream MODERN SPECIES 3 ENSSAUG00010011809 ENSSAUG00010011810 ENSSAUG00010011811 ENSSAUG00010011813 ENSSAUG00010011814 KIF2A (ENSSAUG00010011847) ENSSAUG00010014871 ENSSAUG00010014873 ZSWIM6 (ENSSAUG00010014895) ENSSAUG00010016234 ENSSAUG00010016235 ENSSAUG00010016236 ENSSAUG00010016237 ahr2 (ENSSAUG00010016242) mat2al (ENSSAUG00010016252) ##20 si:ch73-234b20.5 (ENSSAUG00010016579) ##22 hnrnpd (ENSSAUG00010016583) enoph1 (ENSSAUG00010016585) TMEM150C (ENSSAUG00010016588) ##25 sec31a (ENSSAUG00010016623) lin54 (ENSSAUG00010016779) cops4 (ENSSAUG00010016783) plac8.1 (ENSSAUG00010016792) ADAMTS6 (ENSSAUG00010016797) cwc27 (ENSSAUG00010016932) ppwd1 (ENSSAUG00010016956) ENSSAUG00010016962 ENSSAUG00010016991 ENSSAUG00010017025 ENSSAUG00010017026 ENSSAUG00010017027 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00550000074853 ENSGT00390000002172.B ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b European seabass MODERN SPECIES 9 SV2C (ENSDLAG00005022048) CERT1 (ENSDLAG00005021764) hmgcrb (ENSDLAG00005021232) GCNT4 (ENSDLAG00005027499) ENSDLAG00005028991 mzt2b (ENSDLAG00005031291) ENSDLAG00005013686 ENSDLAG00005021185 ENSDLAG00005021155 ENSDLAG00005020960 plac8.1 (ENSDLAG00005020949) COPS4 (ENSDLAG00005020910) lin54 (ENSDLAG00005020845) SEC31A (ENSDLAG00005020508) mat2al (ENSDLAG00005020467) ##20 si:ch73-234b20.5 (ENSDLAG00005034912) ##22 hnrnpd (ENSDLAG00005020442) enoph1 (ENSDLAG00005020433) TMEM150C (ENSDLAG00005020425) ##25 ENSDLAG00005020362 ENSDLAG00005019991 ENSDLAG00005018427 PITPNM2 (ENSDLAG00005015579) MPHOSPH9 (ENSDLAG00005015522) CDK2AP1 (ENSDLAG00005031361) SBNO1 (ENSDLAG00005012458) kmt5aa (ENSDLAG00005032838) ENSDLAG00005030358 ENSDLAG00005012230 ENSDLAG00005012197 ENSDLAG00005012192 Large yellow croaker MODERN SPECIES 4 ENSLCRG00005008623 ddx3xa (ENSLCRG00005008630) nyx (ENSLCRG00005010277) CASK (ENSLCRG00005010297) ENSLCRG00005012002 gpr34b (ENSLCRG00005012003) sbno1 (ENSLCRG00005012010) CDK2AP1 (ENSLCRG00005012228) MPHOSPH9 (ENSLCRG00005012234) kmt5aa (ENSLCRG00005002364) PITPNM2 (ENSLCRG00005002426) KIF2A (ENSLCRG00005002762) ZSWIM6 (ENSLCRG00005002956) ahr2 (ENSLCRG00005004525) mat2al (ENSLCRG00005004527) ##20 si:ch73-234b20.5 (ENSLCRG00005004543) ##22 hnrnpd (ENSLCRG00005004544) ENOPH1 (ENSLCRG00005004552) TMEM150C (ENSLCRG00005004553) ##25 sec31a (ENSLCRG00005004561) lin54 (ENSLCRG00005004573) cops4 (ENSLCRG00005004664) plac8.1 (ENSLCRG00005004703) ADAMTS6 (ENSLCRG00005004705) cwc27 (ENSLCRG00005004955) ppwd1 (ENSLCRG00005004973) trim23 (ENSLCRG00005004978) gnsb (ENSLCRG00005005106) mrps24 (ENSLCRG00005005429) nudcd3 (ENSLCRG00005005433) CAMK2B (ENSLCRG00005005442) Perciformes ANCESTRAL SPECIES 16 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Perciformes_a ANCESTRAL SPECIES 12 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b Channel bull blenny MODERN SPECIES 3 ENSCGOG00000004105 denr (ENSCGOG00000004119) ccdc62 (ENSCGOG00000004191) HIP1R (ENSCGOG00000004261) RILPL1 (ENSCGOG00000005624) kmt5aa (ENSCGOG00000005633) sbno1 (ENSCGOG00000005666) CDK2AP1 (ENSCGOG00000007500) MPHOSPH9 (ENSCGOG00000007509) PITPNM2 (ENSCGOG00000007514) KIF2A (ENSCGOG00000007698) ZSWIM6 (ENSCGOG00000010592) ahr2 (ENSCGOG00000010813) mat2al (ENSCGOG00000010821) ##20 hnrnpd (ENSCGOG00000011480) si:ch73-234b20.5 (ENSCGOG00000011539) ##22 enoph1 (ENSCGOG00000011542) TMEM150C (ENSCGOG00000011547) ##25 sec31a (ENSCGOG00000011628) lin54 (ENSCGOG00000015485) cops4 (ENSCGOG00000015563) plac8.1 (ENSCGOG00000015587) ADAMTS6 (ENSCGOG00000015595) cwc27 (ENSCGOG00000015627) ppwd1 (ENSCGOG00000015933) trim23 (ENSCGOG00000016037) mzt2b (ENSCGOG00000016240) lhx5 (ENSCGOG00000016241) GCNT4 (ENSCGOG00000016250) hmgcrb (ENSCGOG00000016256) CERT1 (ENSCGOG00000016569) Pike perch MODERN SPECIES 165 ENSSLUG00000018282 ENSSLUG00000018287 HIP1R (ENSSLUG00000018303) RILPL1 (ENSSLUG00000018336) kmt5aa (ENSSLUG00000018350) sbno1 (ENSSLUG00000018463) CDK2AP1 (ENSSLUG00000022395) MPHOSPH9 (ENSSLUG00000022407) ENSSLUG00000022413 PITPNM2 (ENSSLUG00000022540) KIF2A (ENSSLUG00000023853) ZSWIM6 (ENSSLUG00000024177) ENSSLUG00000024223 ahr2 (ENSSLUG00000002968) mat2al (ENSSLUG00000003453) ##20 si:ch73-234b20.5 (ENSSLUG00000003528) ##22 hnrnpd (ENSSLUG00000003534) enoph1 (ENSSLUG00000003542) TMEM150C (ENSSLUG00000003552) ##25 sec31a (ENSSLUG00000003678) lin54 (ENSSLUG00000004104) cops4 (ENSSLUG00000004332) PLAC8 (ENSSLUG00000004384) ENSSLUG00000004397 ENSSLUG00000004419 PLAC8 (ENSSLUG00000004426) ENSSLUG00000004433 ENSSLUG00000004436 Cottioidei ANCESTRAL SPECIES 33 ENSGT00940000155122.b ENSGT00990000203619.A.b.b.b.b.a.b ENSGT00390000014349 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00500000044984 ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000014845 ENSGT00940000166328 ENSGT00940000159721.h ENSGT00940000155305.b.b ENSGT00940000155123.b.b Lumpfish MODERN SPECIES 3 usp20 (ENSCLMG00005014215) RPL7A (ENSCLMG00005014319) ENSCLMG00005014326 surf1 (ENSCLMG00005014335) surf6 (ENSCLMG00005014336) kyat1 (ENSCLMG00005014337) kmt5aa (ENSCLMG00005014338) sbno1 (ENSCLMG00005014368) CDK2AP1 (ENSCLMG00005017595) ENSCLMG00005017596 PITPNM2 (ENSCLMG00005017599) ENSCLMG00005017602 ZSWIM6 (ENSCLMG00005017606) ENSCLMG00005018124 mat2al (ENSCLMG00005018126) ##20 si:ch73-234b20.5 (ENSCLMG00005018135) ##22 hnrnpd (ENSCLMG00005018137) enoph1 (ENSCLMG00005018139) sec31a (ENSCLMG00005018147) lin54 (ENSCLMG00005018332) cops4 (ENSCLMG00005018470) plac8.1 (ENSCLMG00005018495) ADAMTS6 (ENSCLMG00005018496) cwc27 (ENSCLMG00005018500) ppwd1 (ENSCLMG00005018502) trim23 (ENSCLMG00005018578) mzt2b (ENSCLMG00005018711) lhx5 (ENSCLMG00005018712) GCNT4 (ENSCLMG00005018715) hmgcrb (ENSCLMG00005018721) CERT1 (ENSCLMG00005018833) Ballan wrasse MODERN SPECIES 314 TMEM38B (ENSLBEG00000027414) ZNF462 (ENSLBEG00000027432) ahr2 (ENSLBEG00000027450) mat2al (ENSLBEG00000027469) ##20 si:ch73-234b20.5 (ENSLBEG00000027485) ##22 hnrnpd (ENSLBEG00000027508) enoph1 (ENSLBEG00000027536) TMEM150C (ENSLBEG00000027546) ##25 sec31a (ENSLBEG00000027609) lin54 (ENSLBEG00000027727) cops4 (ENSLBEG00000027798) plac8.1 (ENSLBEG00000027815) ADAMTS6 (ENSLBEG00000027841) cwc27 (ENSLBEG00000027896) ppwd1 (ENSLBEG00000027922) trim23 (ENSLBEG00000027953) mzt2b (ENSLBEG00000027972) lhx5 (ENSLBEG00000027984) GCNT4 (ENSLBEG00000028000) hmgcrb (ENSLBEG00000028020) Tiger tail seahorse MODERN SPECIES 414 pik3r1 (ENSHCOG00000003396) ENSHCOG00000003360 bcl7a (ENSHCOG00000003337) ENSHCOG00000003330 ENSHCOG00000003321 denr (ENSHCOG00000003310) ENSHCOG00000003290 kmt5aa (ENSHCOG00000003265) sbno1 (ENSHCOG00000003246) CDK2AP1 (ENSHCOG00000003198) MPHOSPH9 (ENSHCOG00000003193) ENSHCOG00000000093 ENSHCOG00000003163 ENSHCOG00000003147 ENSHCOG00000003137 si:ch73-234b20.5 (ENSHCOG00000003113) ##22 hnrnpd (ENSHCOG00000000087) enoph1 (ENSHCOG00000002977) sec31a (ENSHCOG00000002960) lin54 (ENSHCOG00000002894) cops4 (ENSHCOG00000002860) plac8.1 (ENSHCOG00000002835) ADAMTS6 (ENSHCOG00000002822) cwc27 (ENSHCOG00000002796) ppwd1 (ENSHCOG00000002786) trim23 (ENSHCOG00000002759) fbp1b (ENSHCOG00000002735) c9 (ENSHCOG00000002725) dab2 (ENSHCOG00000002714) PIP5KL1 (ENSHCOG00000002692) sh3glb2b (ENSHCOG00000002670) Pinecone sodierfish MODERN SPECIES 3 surf1 (ENSMMDG00005023586) surf6 (ENSMMDG00005023587) kyat1 (ENSMMDG00005023588) ENSMMDG00005023592 HIP1R (ENSMMDG00005023600) RILPL1 (ENSMMDG00005023628) kmt5aa (ENSMMDG00005023629) sbno1 (ENSMMDG00005023638) CDK2AP1 (ENSMMDG00005023759) MPHOSPH9 (ENSMMDG00005023762) PITPNM2 (ENSMMDG00005023769) KIF2A (ENSMMDG00005023786) ZSWIM6 (ENSMMDG00005001196) ENSMMDG00005001326 mat2al (ENSMMDG00005001793) ##20 si:ch73-234b20.5 (ENSMMDG00005001958) ##22 hnrnpd (ENSMMDG00005001961) enoph1 (ENSMMDG00005001964) TMEM150C (ENSMMDG00005001980) ##25 SCD5 (ENSMMDG00005002022) sec31a (ENSMMDG00005002969) ENSMMDG00005002976 lin54 (ENSMMDG00005003009) cops4 (ENSMMDG00005003373) ENSMMDG00005003389 plac8.1 (ENSMMDG00005003391) ADAMTS6 (ENSMMDG00005003397) cwc27 (ENSMMDG00005003407) ppwd1 (ENSMMDG00005003414) trim23 (ENSMMDG00005003417) mzt2b (ENSMMDG00005004523) Cod MODERN SPECIES 10 ENSGMOG00000017818 ENSGMOG00000027051 ENSGMOG00000019828 ENSGMOG00000017892 ENSGMOG00000030757 ENSGMOG00000017913 ENSGMOG00000018198 kmt5aa (ENSGMOG00000030005) SBNO1 (ENSGMOG00000018229) CDK2AP1 (ENSGMOG00000029907) ENSGMOG00000029750 ENSGMOG00000025118 PITPNM2 (ENSGMOG00000018331) ENSGMOG00000018385 ENSGMOG00000018424 si:ch73-234b20.5 (ENSGMOG00000025085) ##22 hnrnpd (ENSGMOG00000018481) enoph1 (ENSGMOG00000018492) TMEM150C (ENSGMOG00000018512) ##25 sec31a (ENSGMOG00000018568) LIN54 (ENSGMOG00000018604) ENSGMOG00000018624 ENSGMOG00000018638 ENSGMOG00000018645 ENSGMOG00000018678 ENSGMOG00000018702 ENSGMOG00000018717 bbln (ENSGMOG00000018731) ENSGMOG00000018734 dnm1a (ENSGMOG00000002525) golga2 (ENSGMOG00000002465) Protacanthopterygii ANCESTRAL SPECIES 36 ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000163293.c.b ENSGT00940000155449 ENSGT00940000155149 ENSGT00940000178081 ENSGT00500000044984 ENSGT00940000164860.c ENSGT00940000153849.a.a.b ENSGT00940000155570.t ENSGT00940000155496.a.a.f ENSGT00940000154486.b.a.a.b.e.a.a.b ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914.ab ENSGT00940000154426 ENSGT00440000039914.`b ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00990000209055 ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000158733 Salmoninae ANCESTRAL SPECIES 179 ENSGT00990000203619.A.b.b.b.b.a.b.j ENSGT00390000014349.a ENSGT00940000157897.a.h ENSGT00940000157648 ENSGT00940000163293.c.b.d ENSGT00940000155449.v ENSGT00940000155149.jc.b.a ENSGT00940000178081 ENSGT00940000155149.jc.a.b ENSGT00500000044984.q ENSGT00940000153849.a.a.b.d ENSGT00940000155570.t.e.b ENSGT00940000155496.a.a.f.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426.g ENSGT00440000039914.`b ENSGT01030000234578.A.a.j ##25 ENSGT00940000162090.c ENSGT00390000003175.a.b.j ENSGT00940000155881.i ENSGT00940000153510.b.m ENSGT00940000157329.i ENSGT00940000156571.ab.b ENSGT00940000155967.e ENSGT00510000047710 ENSGT00940000169093 ENSGT00940000158562.i ENSGT00940000166328.c Salmoninae_a ANCESTRAL SPECIES 24 ENSGT00990000203619.A.b.b.b.b.a.b.j ENSGT00390000014349.a ENSGT00940000157897.a.h ENSGT00940000157648 ENSGT00940000163293.c.b.d ENSGT00940000155449.v ENSGT00940000155149.jc.b.a ENSGT00940000178081 ENSGT00940000155149.jc.a.b ENSGT00500000044984.q ENSGT00940000153849.a.a.b.d ENSGT00940000155570.t.e.b ENSGT00940000155496.a.a.f.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426.g ENSGT00440000039914.`b ENSGT01030000234578.A.a.j ##25 ENSGT00940000162090.c ENSGT00390000003175.a.b.j ENSGT00940000155881.i ENSGT00940000153510.b.m ENSGT00940000157329.i ENSGT00940000156571.ab.b ENSGT00940000155967.e ENSGT00510000047710 ENSGT00940000169093 ENSGT00940000158562.i ENSGT00940000166328.c Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00990000203619.A.b.b.b.b.a.b.j ENSGT00390000014349.a ENSGT00940000157897.a.h ENSGT00940000157648 ENSGT00940000163293.c.b.d ENSGT00940000155449.v ENSGT00940000155149.jc.b.a ENSGT00940000178081 ENSGT00940000155149.jc.a.b ENSGT00500000044984.q ENSGT00940000153849.a.a.b.d ENSGT00940000155570.t.e.b ENSGT00940000155496.a.a.f.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426.g ENSGT00440000039914.`b ENSGT01030000234578.A.a.j ##25 ENSGT00940000162090.c ENSGT00390000003175.a.b.j ENSGT00940000155881.i ENSGT00940000153510.b.m ENSGT00940000157329.i ENSGT00940000156571.ab.b ENSGT00940000155967.e ENSGT00510000047710 ENSGT00940000155770.b.b ENSGT01100000263865.a ENSGT00390000013415.b.d.a.a Oncorhynchus_a ANCESTRAL SPECIES 19 ENSGT00940000155122.b.bc.b ENSGT00990000203619.A.b.b.b.b.a.b.j ENSGT00390000014349.a ENSGT00940000157897.a.h ENSGT00940000157648 ENSGT00940000163293.c.b.d ENSGT00940000155449.v ENSGT00940000155149.jc.b.a ENSGT00940000178081 ENSGT00500000044984.q ENSGT00940000153849.a.a.b.d ENSGT00940000155570.t.e.b ENSGT00940000155496.a.a.f.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914.`b ENSGT01030000234578.A.a.j ##25 ENSGT00940000162090.c ENSGT00390000003175.a.b.j ENSGT00940000155881.i ENSGT00940000153510.b.m ENSGT00940000157329.i ENSGT00940000156571.ab.b ENSGT00940000155967.e ENSGT00510000047710 ENSGT00940000158562.i ENSGT00940000166328.c ENSGT00510000048902.a.f.d ENSGT00940000159721.h.h Chinook salmon MODERN SPECIES 33 ENSOTSG00005042606 ENSOTSG00005042602 ENSOTSG00005042600 denr (ENSOTSG00005042597) RILPL1 (ENSOTSG00005042596) snrnp35 (ENSOTSG00005042593) kmt5aa (ENSOTSG00005042592) sbno1 (ENSOTSG00005036204) CDK2AP1 (ENSOTSG00005036111) ENSOTSG00005036110 PITPNM2 (ENSOTSG00005036061) KIF2A (ENSOTSG00005030532) ZSWIM6 (ENSOTSG00005030524) ENSOTSG00005030523 mat2al (ENSOTSG00005030521) ##20 si:ch73-234b20.5 (ENSOTSG00005030520) ##22 hnrnpd (ENSOTSG00005030515) hnrnpdl (ENSOTSG00005030513) enoph1 (ENSOTSG00005030509) TMEM150C (ENSOTSG00005030501) ##25 SCD5 (ENSOTSG00005030498) lin54 (ENSOTSG00005030493) cops4 (ENSOTSG00005030475) ENSOTSG00005030468 ENSOTSG00005030467 ADAMTS6 (ENSOTSG00005030466) srek1ip1 (ENSOTSG00005042182) ppwd1 (ENSOTSG00005030464) trim23 (ENSOTSG00005042181) mzt2b (ENSOTSG00005042179) lhx5 (ENSOTSG00005042178) Coho salmon MODERN SPECIES 26 RILPL1 (ENSOKIG00005001582) snrnp35 (ENSOKIG00005001566) kmt5aa (ENSOKIG00005001559) sbno1 (ENSOKIG00005000709) CDK2AP1 (ENSOKIG00005000166) ENSOKIG00005000148 MPHOSPH9 (ENSOKIG00005000125) PITPNM2 (ENSOKIG00005011135) ENSOKIG00005011054 ENSOKIG00005010736 ENSOKIG00005010703 ZSWIM6 (ENSOKIG00005010627) ENSOKIG00005010600 ENSOKIG00005010595 mat2al (ENSOKIG00005010586) ##20 si:ch73-234b20.5 (ENSOKIG00005010578) ##22 hnrnpd (ENSOKIG00005010566) hnrnpdl (ENSOKIG00005010540) enoph1 (ENSOKIG00005010523) TMEM150C (ENSOKIG00005010512) ##25 SCD5 (ENSOKIG00005010503) ENSOKIG00005010499 lin54 (ENSOKIG00005010393) ENSOKIG00005010330 ENSOKIG00005010319 ENSOKIG00005010311 ADAMTS6 (ENSOKIG00005009945) ENSOKIG00005009891 ENSOKIG00005009883 ppwd1 (ENSOKIG00005009851) trim23 (ENSOKIG00005009707) Rainbow trout MODERN SPECIES 3 ENSOMYG00000017684 ENSOMYG00000001221 ENSOMYG00000017681 denr (ENSOMYG00000017655) RILPL1 (ENSOMYG00000017616) snrnp35 (ENSOMYG00000017584) kmt5aa (ENSOMYG00000017571) sbno1 (ENSOMYG00000010222) CDK2AP1 (ENSOMYG00000008164) ENSOMYG00000008135 PITPNM2 (ENSOMYG00000007835) ENSOMYG00000006607 ENSOMYG00000005453 ENSOMYG00000004817 mat2al (ENSOMYG00000004742) ##20 si:ch73-234b20.5 (ENSOMYG00000004681) ##22 hnrnpd (ENSOMYG00000004637) hnrnpdl (ENSOMYG00000004595) enoph1 (ENSOMYG00000004563) TMEM150C (ENSOMYG00000004540) ##25 ENSOMYG00000063982 ENSOMYG00000004369 ENSOMYG00000076729 ENSOMYG00000004148 ENSOMYG00000004127 ENSOMYG00000004017 ENSOMYG00000057000 ENSOMYG00000003582 ENSOMYG00000003481 ENSOMYG00000003339 ENSOMYG00000003275 Salmo ANCESTRAL SPECIES 13 ENSGT00390000002172.B.a.b ENSGT00940000155122.b.bc.b ENSGT00990000203619.A.b.b.b.b.a.b.j ENSGT00390000014349.a ENSGT00940000157897.a.h ENSGT00940000157648 ENSGT00940000163293.c.b.d ENSGT00940000155449.v ENSGT00940000155149.jc.b.a ENSGT00500000044984.q ENSGT00940000153849.a.a.b.d ENSGT00940000155570.t.e.b ENSGT00940000155496.a.a.f.a.b ENSGT00940000154486.b.a.a.b.e.a.a.b.a ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00440000039914.ab ENSGT00940000154426.h ENSGT01030000234578.A.a.i ##25 ENSGT00940000162090.d ENSGT00390000003175.a.b.i ENSGT00940000155881.j ENSGT00940000153510.b.n ENSGT00990000209055 ENSGT00940000157329.j ENSGT00940000156571.ab.a ENSGT00940000155967.f ENSGT00940000158733.c ENSGT00940000158562.j ENSGT00390000014845 River trout MODERN SPECIES 6 ENSSTUG00000016454 ENSSTUG00000016461 denr (ENSSTUG00000016464) RILPL1 (ENSSTUG00000016483) snrnp35 (ENSSTUG00000016535) kmt5aa (ENSSTUG00000016545) sbno1 (ENSSTUG00000016677) CDK2AP1 (ENSSTUG00000021697) MPHOSPH9 (ENSSTUG00000021718) PITPNM2 (ENSSTUG00000021826) ENSSTUG00000023954 ZSWIM6 (ENSSTUG00000024436) ENSSTUG00000024714 mat2al (ENSSTUG00000024727) ##20 ENSSTUG00000024755 si:ch73-234b20.5 (ENSSTUG00000024765) ##22 hnrnpd (ENSSTUG00000024774) enoph1 (ENSSTUG00000024842) hnrnpdl (ENSSTUG00000024856) TMEM150C (ENSSTUG00000024873) ##25 SCD5 (ENSSTUG00000024905) sec31a (ENSSTUG00000026000) lin54 (ENSSTUG00000027395) cops4 (ENSSTUG00000027438) ENSSTUG00000027532 PLAC8 (ENSSTUG00000027544) ADAMTS6 (ENSSTUG00000027558) srek1ip1 (ENSSTUG00000027934) ppwd1 (ENSSTUG00000027969) trim23 (ENSSTUG00000028000) mzt2b (ENSSTUG00000028050) Atlantic salmon MODERN SPECIES 4 EIF2B1 (ENSSSAG00000005551) ENSSSAG00000114897 ENSSSAG00000005975 denr (ENSSSAG00000005986) rilpl1 (ENSSSAG00000041761) snrnp35 (ENSSSAG00000006055) kmt5aa (ENSSSAG00000006163) sbno1 (ENSSSAG00000041895) cdka1 (ENSSSAG00000041550) MPHOSPH9 (ENSSSAG00000041658) PITPNM2 (ENSSSAG00000053461) ENSSSAG00000078890 ENSSSAG00000099788 ENSSSAG00000055531 mat2al (ENSSSAG00000055621) ##20 si:ch73-234b20.5 (ENSSSAG00000118448) ##22 hnrnpd (ENSSSAG00000055684) enoph1 (ENSSSAG00000120380) HNRDL (ENSSSAG00000055698) SCD5 (ENSSSAG00000087236) SEC31A (ENSSSAG00000056097) lin54 (ENSSSAG00000073397) cops4 (ENSSSAG00000073417) PLAC8 (ENSSSAG00000073431) ENSSSAG00000073447 ENSSSAG00000073507 ENSSSAG00000073515 ENSSSAG00000073544 ENSSSAG00000091630 ENSSSAG00000073899 ENSSSAG00000073904 Huchen MODERN SPECIES 1851 ENSHHUG00000004199 mat2al (ENSHHUG00000004273) ##20 si:ch73-234b20.5 (ENSHHUG00000004494) ##22 hnrnpd (ENSHHUG00000004501) enoph1 (ENSHHUG00000004532) hnrnpdl (ENSHHUG00000004566) SCD5 (ENSHHUG00000004719) ENSHHUG00000004935 ENSHHUG00000004943 lin54 (ENSHHUG00000004946) cops4 (ENSHHUG00000005019) ENSHHUG00000005052 ADAMTS6 (ENSHHUG00000005065) Northern pike MODERN SPECIES 13 HIP1R (ENSELUG00000002768) RILPL1 (ENSELUG00000002813) ENSELUG00000029706 snrnp35 (ENSELUG00000000071) kmt5aa (ENSELUG00000002825) sbno1 (ENSELUG00000002886) CDK2AP1 (ENSELUG00000002934) ENSELUG00000002967 ENSELUG00000033325 PITPNM2 (ENSELUG00000003067) ENSELUG00000003108 KIF2A (ENSELUG00000003141) ZSWIM6 (ENSELUG00000003169) ENSELUG00000029949 mat2al (ENSELUG00000003216) ##20 vamp8 (ENSELUG00000003187) ##22 enoph1 (ENSELUG00000003255) hnrnpdl (ENSELUG00000003241) TMEM150C (ENSELUG00000003276) ##25 sec31a (ENSELUG00000003329) lin54 (ENSELUG00000003370) cops4 (ENSELUG00000003391) ENSELUG00000003402 plac8.1 (ENSELUG00000003418) ADAMTS6 (ENSELUG00000003445) cwc27 (ENSELUG00000003475) srek1ip1 (ENSELUG00000003495) ppwd1 (ENSELUG00000003516) trim23 (ENSELUG00000003542) mzt2b (ENSELUG00000003568) lhx5 (ENSELUG00000003589) Osteoglossiformes ANCESTRAL SPECIES 39 ENSGT00950000182908.A ENSGT00940000159608 ENSGT00940000155603.A.b.d ENSGT00940000157507 ENSGT00390000005646 ENSGT00940000157357.f ENSGT00940000156591 ENSGT00940000160287 ENSGT00940000157326 ENSGT00940000159168 ENSGT00950000183162.b ENSGT00390000006260 ENSGT00550000074618.a.b.a ENSGT00390000018326 ENSGT00950000183185.c.b ##20 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000015280 P. kingsleyae MODERN SPECIES 115 slc38a9 (ENSPKIG00000025454) ENSPKIG00000025456 ENSPKIG00000025458 ENSPKIG00000025464 fut10 (ENSPKIG00000025470) nrg1 (ENSPKIG00000025481) WRN (ENSPKIG00000025497) PURG (ENSPKIG00000025501) ENSPKIG00000025503 ppp2cb (ENSPKIG00000025506) ubxn8 (ENSPKIG00000025508) mat2al (ENSPKIG00000025509) ##20 si:ch73-234b20.5 (ENSPKIG00000025511) ##22 hnrnpd (ENSPKIG00000025512) hnrnpdl (ENSPKIG00000025514) enoph1 (ENSPKIG00000025516) TMEM150C (ENSPKIG00000025519) ##25 SCD5 (ENSPKIG00000025520) sec31a (ENSPKIG00000025523) lin54 (ENSPKIG00000025530) cops4 (ENSPKIG00000025533) plac8.1 (ENSPKIG00000025534) ADAMTS6 (ENSPKIG00000025536) cwc27 (ENSPKIG00000025538) srek1ip1 (ENSPKIG00000025540) ppwd1 (ENSPKIG00000025542) trim23 (ENSPKIG00000025543) trappc13 (ENSPKIG00000025545) Asian bonytongue MODERN SPECIES 21 ANKRD55 (ENSSFOG00015006619) IL6ST (ENSSFOG00015006588) ENSSFOG00015006549 ddx4 (ENSSFOG00015006531) slc38a9 (ENSSFOG00015006467) ENSSFOG00015006403 ENSSFOG00015006370 fut10 (ENSSFOG00015006346) nrg1 (ENSSFOG00015006282) WRN (ENSSFOG00015006123) PURG (ENSSFOG00015033307) ENSSFOG00015006034 ppp2cb (ENSSFOG00015032663) ubxn8 (ENSSFOG00015005997) mat2al (ENSSFOG00015005969) ##20 si:ch73-234b20.5 (ENSSFOG00015005945) ##22 hnrnpd (ENSSFOG00015005913) hnrnpdl (ENSSFOG00015005893) enoph1 (ENSSFOG00015005874) TMEM150C (ENSSFOG00015005842) ##25 SCD5 (ENSSFOG00015030208) sec31a (ENSSFOG00015005688) lin54 (ENSSFOG00015005629) cops4 (ENSSFOG00015005542) plac8.1 (ENSSFOG00015005492) ADAMTS6 (ENSSFOG00015005415) cwc27 (ENSSFOG00015005406) srek1ip1 (ENSSFOG00015025571) ppwd1 (ENSSFOG00015005347) trim23 (ENSSFOG00015005305) trappc13 (ENSSFOG00015005255) Spotted gar MODERN SPECIES 658 ENSLOCG00000010916 ENSLOCG00000010902 ddx4 (ENSLOCG00000010887) slc38a9 (ENSLOCG00000010879) SH2D4A (ENSLOCG00000010857) ENSLOCG00000010844 fut10 (ENSLOCG00000010836) nrg1 (ENSLOCG00000010824) ENSLOCG00000010808 WRN (ENSLOCG00000010792) PURG (ENSLOCG00000017542) ENSLOCG00000010784 ppp2cb (ENSLOCG00000010776) ubxn8 (ENSLOCG00000010771) mat2al (ENSLOCG00000010761) ##20 si:ch73-234b20.5 (ENSLOCG00000010753) ##22 hnrnpd (ENSLOCG00000010743) hnrnpdl (ENSLOCG00000010736) enoph1 (ENSLOCG00000010725) TMEM150C (ENSLOCG00000010721) ##25 SCD5 (ENSLOCG00000010712) sec31a (ENSLOCG00000010692) lin54 (ENSLOCG00000010680) cops4 (ENSLOCG00000010665) plac8.1 (ENSLOCG00000010660) SHISAL2B (ENSLOCG00000010652) srek1ip1 (ENSLOCG00000010643) cwc27 (ENSLOCG00000010631) ADAMTS6 (ENSLOCG00000010611) ppwd1 (ENSLOCG00000010598) trim23 (ENSLOCG00000010591) Reedfish MODERN SPECIES 15 ENSECRG00000007843 atp5mc3a (ENSECRG00000007829) ENSECRG00000007804 ddx4 (ENSECRG00000007753) slc38a9 (ENSECRG00000007731) ENSECRG00000007717 ENSECRG00000007708 PSD3 (ENSECRG00000007698) fut10 (ENSECRG00000007688) nrg1 (ENSECRG00000007677) WRN (ENSECRG00000007612) PURG (ENSECRG00000007588) ppp2cb (ENSECRG00000007578) ubxn8 (ENSECRG00000007565) mat2al (ENSECRG00000007559) ##20 si:ch73-234b20.5 (ENSECRG00000007552) ##22 hnrnpd (ENSECRG00000007542) hnrnpdl (ENSECRG00000007520) enoph1 (ENSECRG00000007490) TMEM150C (ENSECRG00000007477) ##25 pgm5 (ENSECRG00000007463) unc45b (ENSECRG00000007444) ENSECRG00000006735 SHROOM3 (ENSECRG00000006719) ENSECRG00000006698 SEPTIN11 (ENSECRG00000006667) ccni (ENSECRG00000006646) ccng2 (ENSECRG00000006638) coq2 (ENSECRG00000006619) plac8.1 (ENSECRG00000006613) cops4 (ENSECRG00000006594) Sarcopterygii ANCESTRAL SPECIES 358 ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B Tetrapoda ANCESTRAL SPECIES 25 ENSGT00940000156423 ENSGT00530000064292 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.a Amniota ANCESTRAL SPECIES 2 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000162130 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT01030000235152 ENSGT00940000161474.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329 ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 Sauria ANCESTRAL SPECIES 6 ENSGT00530000064292.a ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT01030000235152.b ENSGT00940000161474.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00970000194080 ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b Archelosauria ANCESTRAL SPECIES 4 ENSGT00530000064292.a ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00970000194080 ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 Cryptodira ANCESTRAL SPECIES 2 ENSGT00990000205360 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000162130 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b.f ENSGT00940000157329.u.b.e ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 Testudinoidea ANCESTRAL SPECIES 34 ENSGT00530000064292.b ENSGT00990000205360 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b.f ENSGT00940000157329.u.b.e ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 Emydidae ANCESTRAL SPECIES 27 ENSGT00990000205360 ENSGT00990000213510 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b.f ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 Three-toed box turtle MODERN SPECIES 63 CCNG2 (ENSTMTG00000004031) ENSTMTG00000003988 ENSTMTG00000003975 CNOT6L (ENSTMTG00000003952) MRPL1 (ENSTMTG00000003928) ENSTMTG00000003655 ANXA3 (ENSTMTG00000003594) BMP2K (ENSTMTG00000003553) PAQR3 (ENSTMTG00000003519) ANTXR2 (ENSTMTG00000003403) PRDM8 (ENSTMTG00000003381) FGF5 (ENSTMTG00000003353) ENSTMTG00000003336 BMP3 (ENSTMTG00000003319) RASGEF1B (ENSTMTG00000003306) ENSTMTG00000003295 ##22 HNRNPD (ENSTMTG00000003266) HNRNPDL (ENSTMTG00000003251) ENOPH1 (ENSTMTG00000003239) TMEM150C (ENSTMTG00000003220) ##25 SCD5 (ENSTMTG00000003174) SEC31A (ENSTMTG00000003133) THAP9 (ENSTMTG00000003117) LIN54 (ENSTMTG00000003101) COPS4 (ENSTMTG00000003077) ENSTMTG00000003067 painted turtle MODERN SPECIES 2431 PCYT1A (ENSCPBG00000008189) DYNLT2B (ENSCPBG00000008185) ENSCPBG00000008181 ENSCPBG00000008174 ENSCPBG00000008171 ENSCPBG00000008167 ENSCPBG00000008144 MASP1 (ENSCPBG00000008137) ANTXR2 (ENSCPBG00000008113) PRDM8 (ENSCPBG00000008096) FGF5 (ENSCPBG00000008083) ENSCPBG00000008079 CFAP299 (ENSCPBG00000008071) BMP3 (ENSCPBG00000008067) RASGEF1B (ENSCPBG00000008051) ENSCPBG00000008036 ##22 HNRNPD (ENSCPBG00000008025) HNRNPDL (ENSCPBG00000008014) ENOPH1 (ENSCPBG00000008002) TMEM150C (ENSCPBG00000007990) ##25 SCD5 (ENSCPBG00000007982) SEC31A (ENSCPBG00000007911) THAP9 (ENSCPBG00000007889) LIN54 (ENSCPBG00000007858) COPS4 (ENSCPBG00000007835) PLAC8 (ENSCPBG00000007824) ENSCPBG00000007819 COQ2 (ENSCPBG00000007807) HPSE (ENSCPBG00000007796) HELQ (ENSCPBG00000007787) ENSCPBG00000007783 Testudinidae ANCESTRAL SPECIES 39 ENSGT00530000064292.b ENSGT00990000205360 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00940000166264 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b.f ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 Goode s thornscrub tortoise MODERN SPECIES 19 ENSGEVG00005003887 ENSGEVG00005003874 CNOT6L (ENSGEVG00005003849) MRPL1 (ENSGEVG00005003827) ENSGEVG00005003756 ANXA3 (ENSGEVG00005003703) BMP2K (ENSGEVG00005003689) PAQR3 (ENSGEVG00005003666) ANTXR2 (ENSGEVG00005003624) PRDM8 (ENSGEVG00005003605) FGF5 (ENSGEVG00005003593) ENSGEVG00005003584 CFAP299 (ENSGEVG00005003578) BMP3 (ENSGEVG00005003568) RASGEF1B (ENSGEVG00005003532) ENSGEVG00005003502 ##22 HNRNPD (ENSGEVG00005003478) HNRNPDL (ENSGEVG00005003463) ENOPH1 (ENSGEVG00005003454) TMEM150C (ENSGEVG00005003441) ##25 SCD5 (ENSGEVG00005003418) SEC31A (ENSGEVG00005003370) THAP9 (ENSGEVG00005003346) LIN54 (ENSGEVG00005003325) COPS4 (ENSGEVG00005003304) PLAC8 (ENSGEVG00005003279) ENSGEVG00005003256 COQ2 (ENSGEVG00005003245) HPSE (ENSGEVG00005003228) HELQ (ENSGEVG00005003205) ENSGEVG00005003191 Abingdon island giant tortoise MODERN SPECIES 1975 ANTXR2 (ENSCABG00000003968) PRDM8 (ENSCABG00000004315) FGF5 (ENSCABG00000004318) ENSCABG00000004326 BMP3 (ENSCABG00000004328) RASGEF1B (ENSCABG00000004332) ENSCABG00000004373 ##22 HNRNPD (ENSCABG00000004380) HNRNPDL (ENSCABG00000004389) ENOPH1 (ENSCABG00000004398) TMEM150C (ENSCABG00000004403) ##25 SCD5 (ENSCABG00000004446) ENSCABG00000004490 Chinese turtle MODERN SPECIES 113 ANTXR2 (ENSPSIG00000017787) PRDM8 (ENSPSIG00000017779) FGF5 (ENSPSIG00000017772) BMP3 (ENSPSIG00000017711) RASGEF1B (ENSPSIG00000017554) ENSPSIG00000017550 ##22 HNRNPD (ENSPSIG00000017029) HNRNPDL (ENSPSIG00000016746) SCD5 (ENSPSIG00000016708) SEC31A (ENSPSIG00000016702) THAP9 (ENSPSIG00000016699) LIN54 (ENSPSIG00000016595) COPS4 (ENSPSIG00000016589) ENSPSIG00000016575 ENSPSIG00000016570 ENSPSIG00000016565 COQ2 (ENSPSIG00000016561) ENSPSIG00000016552 HPSE (ENSPSIG00000015879) HELQ (ENSPSIG00000015865) ENSPSIG00000015848 Archosauria ANCESTRAL SPECIES 1 ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b ENSGT00940000153424.a.b ENSGT00900000143042 ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT01030000234574.B.c.a.g ENSGT01030000234574.B.c.a.h ENSGT00530000063424.b ENSGT00940000165965 ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00940000153771.B ENSGT00940000157329.u.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000161474.b.a ENSGT00940000155881 ENSGT00940000153510.b ENSGT00950000183015.D ENSGT00940000153692.A ENSGT00940000155133.b ENSGT00960000189615 ENSGT00950000182974.a.b ENSGT00940000157583 Australian saltwater crocodile MODERN SPECIES 65 WDFY3 (ENSCPRG00005015252) CDS1 (ENSCPRG00005015205) NKX6-1 (ENSCPRG00005015198) ENSCPRG00005015184 GPAT3 (ENSCPRG00005015172) ENSCPRG00005015164 ENSCPRG00005015159 ENSCPRG00005015145 HELQ (ENSCPRG00005015037) ENSCPRG00005015012 HPSE (ENSCPRG00005014984) ENSCPRG00005014969 ENSCPRG00005014966 ##22 HNRNPD (ENSCPRG00005014961) HNRNPDL (ENSCPRG00005014959) ENOPH1 (ENSCPRG00005014954) TMEM150C (ENSCPRG00005014944) ##25 SCD5 (ENSCPRG00005014907) SEC31A (ENSCPRG00005013624) THAP9 (ENSCPRG00005013454) LIN54 (ENSCPRG00005013448) ENSCPRG00005013441 ENSCPRG00005013439 ENSCPRG00005013431 ARHGAP24 (ENSCPRG00005013430) MAPK10 (ENSCPRG00005013428) PTPN13 (ENSCPRG00005013391) AFF1 (ENSCPRG00005013372) Lepidosauria ANCESTRAL SPECIES 25 ENSGT00990000205360 ENSGT00530000064292.a ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT01030000235152.b ENSGT00940000161474.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00970000194080 ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b Episquamata ANCESTRAL SPECIES 3 ENSGT00990000205360 ENSGT00530000064292.a ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00940000157329.v ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 Laterata ANCESTRAL SPECIES 9 ENSGT00940000156423 ENSGT00960000190413 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00940000157329.v ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 Argentine black and white tegu MODERN SPECIES 11 ENSSMRG00000012851 CNOT6L (ENSSMRG00000012881) MRPL1 (ENSSMRG00000012882) ENSSMRG00000012884 ANXA3 (ENSSMRG00000012886) BMP2K (ENSSMRG00000012887) PAQR3 (ENSSMRG00000012888) ENSSMRG00000012889 ANTXR2 (ENSSMRG00000012892) PRDM8 (ENSSMRG00000012893) FGF5 (ENSSMRG00000012894) CFAP299 (ENSSMRG00000012895) BMP3 (ENSSMRG00000012897) PRKG2 (ENSSMRG00000012898) RASGEF1B (ENSSMRG00000012899) ENSSMRG00000012901 ##22 HNRNPD (ENSSMRG00000012902) HNRNPDL (ENSSMRG00000012903) ENOPH1 (ENSSMRG00000012904) TMEM150C (ENSSMRG00000012905) ##25 SCD5 (ENSSMRG00000012906) SEC31A (ENSSMRG00000012907) LIN54 (ENSSMRG00000012908) COPS4 (ENSSMRG00000012909) ENSSMRG00000012910 ENSSMRG00000012911 ENSSMRG00000012912 ENSSMRG00000012913 COQ2 (ENSSMRG00000012914) HPSE (ENSSMRG00000012915) HELQ (ENSSMRG00000012916) Common wall lizard MODERN SPECIES 17 MRPL1 (ENSPMRG00000023254) ENSPMRG00000023206 ANXA3 (ENSPMRG00000023195) ENSPMRG00000023172 BMP2K (ENSPMRG00000023158) PAQR3 (ENSPMRG00000023152) ANTXR2 (ENSPMRG00000023140) PRDM8 (ENSPMRG00000023132) FGF5 (ENSPMRG00000023129) CFAP299 (ENSPMRG00000023125) BMP3 (ENSPMRG00000023119) PRKG2 (ENSPMRG00000023109) RASGEF1B (ENSPMRG00000023097) ENSPMRG00000023088 ATP5F1D (ENSPMRG00000023087) ENSPMRG00000023083 ##22 HNRNPD (ENSPMRG00000023075) HNRNPDL (ENSPMRG00000023070) ENOPH1 (ENSPMRG00000023067) TMEM150C (ENSPMRG00000023061) ##25 SCD5 (ENSPMRG00000023053) SEC31A (ENSPMRG00000023029) ENSPMRG00000023008 LIN54 (ENSPMRG00000023000) COPS4 (ENSPMRG00000022993) PLAC8 (ENSPMRG00000022988) ENSPMRG00000022982 ENSPMRG00000022978 COQ2 (ENSPMRG00000022974) HPSE (ENSPMRG00000022968) HELQ (ENSPMRG00000022889) Toxicofera ANCESTRAL SPECIES 12 ENSGT00990000205360 ENSGT00530000064292.a ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 ENSGT00940000156320 ENSGT00890000139463.b.b.b ENSGT00940000158449 ENSGT00390000016547 ENSGT00940000159775 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000160325.a ##22 ENSGT00940000158010 ENSGT00940000154426 ENSGT00440000039914 ENSGT01030000234578.A.a ##25 ENSGT00940000162090 ENSGT00390000003175.a.b ENSGT00940000155881 ENSGT00940000153510.b ENSGT00940000157329.u.b ENSGT00970000194080 ENSGT00940000157329.v.a ENSGT00940000157329.u.a ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 Lizard MODERN SPECIES 4 ENSACAG00000007749 ENSACAG00000007763 KRR1 (ENSACAG00000007788) NAP1L1 (ENSACAG00000006924) PHLDA1 (ENSACAG00000037036) OSBPL8 (ENSACAG00000006790) ENSACAG00000038391 CSRP2 (ENSACAG00000037715) ZDHHC17 (ENSACAG00000006696) E2F7 (ENSACAG00000005414) ENSACAG00000036618 NAV3 (ENSACAG00000014617) ENSACAG00000010162 PRKG2 (ENSACAG00000010172) RASGEF1B (ENSACAG00000010279) ENSACAG00000041319 ##22 HNRNPD (ENSACAG00000010342) HNRNPDL (ENSACAG00000010416) ENOPH1 (ENSACAG00000010419) TMEM150C (ENSACAG00000043889) ##25 ENSACAG00000041939 SEC31A (ENSACAG00000010481) ENSACAG00000037011 ENSACAG00000037629 LIN54 (ENSACAG00000010548) ENSACAG00000036755 ENSACAG00000010948 ENSACAG00000010690 ENSACAG00000028601 ENSACAG00000045418 PLAC8 (ENSACAG00000036343) Elephant shark MODERN SPECIES 1496 ENSCMIG00000008848 ENSCMIG00000008844 ENSCMIG00000008843 ENSCMIG00000008842 ENSCMIG00000008841 RAB28 (ENSCMIG00000008828) ENSCMIG00000008819 hs3st1 (ENSCMIG00000008817) ENSCMIG00000008812 ENSCMIG00000008809 WDR1 (ENSCMIG00000008783) ENSCMIG00000008772 ENSCMIG00000008757 etnppl (ENSCMIG00000008712) ostc (ENSCMIG00000008690) si:ch73-234b20.5 (ENSCMIG00000008686) ##22 hnrnpd (ENSCMIG00000008685) hnrnpdl (ENSCMIG00000008684) enoph1 (ENSCMIG00000008680) ENSCMIG00000008677 ##25 ENSCMIG00000008675 sec31a (ENSCMIG00000008623) ENSCMIG00000008558 lin54 (ENSCMIG00000008495) cops4 (ENSCMIG00000008472) ENSCMIG00000008463 ENSCMIG00000008462 coq2 (ENSCMIG00000008458) ccng2 (ENSCMIG00000008454) ccni (ENSCMIG00000008450) SEPTIN11 (ENSCMIG00000008443)