Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Suina	ANCESTRAL SPECIES	13	ENSGT00940000154909	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Pig	MODERN SPECIES	11	LRRTM1 (ENSSSCG00000023859) #7	ENSSSCG00000008250 #8	SUCLG1 (ENSSSCG00000008247) #9	DNAH6 (ENSSSCG00000045529) #10	TMSB10 (ENSSSCG00000008245) #11	KCMF1 (ENSSSCG00000008242) #12	ENSSSCG00000051279 #13	ENSSSCG00000008241 #14	ENSSSCG00000050627 #15	RETSAT (ENSSSCG00000008237) #16	ELMOD3 (ENSSSCG00000008238) #17	CAPG (ENSSSCG00000008239) #18	ENSSSCG00000008240 #19	MAT2A (ENSSSCG00000022300) #20	GGCX (ENSSSCG00000027381) #21	VAMP8 (ENSSSCG00000062938) #22	VAMP5 (ENSSSCG00000033135) #23	RNF181 (ENSSSCG00000008232) #24	TMEM150A (ENSSSCG00000008233) #25	C2orf68 (ENSSSCG00000028287) #26	USP39 (ENSSSCG00000030435) #27	SFTPB (ENSSSCG00000008229) #28	GNLY (ENSSSCG00000008228) #29	ATOH8 (ENSSSCG00000008230) #30	ST3GAL5 (ENSSSCG00000008227) #31	ENSSSCG00000058352 #32	POLR1A (ENSSSCG00000008226) #33	PTCD3 (ENSSSCG00000008225) #34	IMMT (ENSSSCG00000024564) #35	MRPL35 (ENSSSCG00000021746) #36	REEP1 (ENSSSCG00000023710) #37
Chacoan peccary	MODERN SPECIES	778	ENSCWAG00000019058	CTNNA2 (ENSCWAG00000019150) #8	LRRTM1 (ENSCWAG00000019999) #7	SUCLG1 (ENSCWAG00000020040) #9	DNAH6 (ENSCWAG00000020066) #10	TMSB10 (ENSCWAG00000020204)	KCMF1 (ENSCWAG00000003682) #12	TCF7L1 (ENSCWAG00000003731) #14	ENSCWAG00000003769 #15	RETSAT (ENSCWAG00000003794) #16	ELMOD3 (ENSCWAG00000003833) #17	CAPG (ENSCWAG00000003883) #18	ENSCWAG00000003929	MAT2A (ENSCWAG00000003951) #20	GGCX (ENSCWAG00000004008) #21	VAMP8 (ENSCWAG00000004178) #22	VAMP5 (ENSCWAG00000004199) #23	RNF181 (ENSCWAG00000004223) #24	TMEM150A (ENSCWAG00000004246) #25	C2orf68 (ENSCWAG00000004281) #26	USP39 (ENSCWAG00000004340) #27	SFTPB (ENSCWAG00000004607) #28	ENSCWAG00000004815 #29	ATOH8 (ENSCWAG00000004847) #30	ST3GAL5 (ENSCWAG00000004882) #31	POLR1A (ENSCWAG00000005022) #33	PTCD3 (ENSCWAG00000005070) #34	IMMT (ENSCWAG00000005105) #35	MRPL35 (ENSCWAG00000005221) #36	REEP1 (ENSCWAG00000005308) #37	KDM3A (ENSCWAG00000005579)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Camelidae	ANCESTRAL SPECIES	89	ENSGT00940000154909	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000165681 #11	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Arabian camel	MODERN SPECIES	20	ENSCDRG00005017522 #8	LRRTM1 (ENSCDRG00005017487) #7	ENSCDRG00005017214 #8	SUCLG1 (ENSCDRG00005017092) #9	DNAH6 (ENSCDRG00005017032) #10	ENSCDRG00005016982 #11	KCMF1 (ENSCDRG00005016907) #12	TCF7L1 (ENSCDRG00005016823) #14	ENSCDRG00005016793 #15	RETSAT (ENSCDRG00005016753) #16	ELMOD3 (ENSCDRG00005016681) #17	CAPG (ENSCDRG00005016605) #18	SH2D6 (ENSCDRG00005016477) #19	MAT2A (ENSCDRG00005016380) #20	GGCX (ENSCDRG00005016233) #21	VAMP8 (ENSCDRG00005016194) #22	VAMP5 (ENSCDRG00005016173) #23	RNF181 (ENSCDRG00005016091) #24	TMEM150A (ENSCDRG00005016019) #25	C2orf68 (ENSCDRG00005015950) #26	USP39 (ENSCDRG00005015614) #27	SFTPB (ENSCDRG00005015553) #28	ENSCDRG00005015532 #29	ATOH8 (ENSCDRG00005015499) #30	ST3GAL5 (ENSCDRG00005015428) #31	POLR1A (ENSCDRG00005015250) #33	PTCD3 (ENSCDRG00005015005) #34	IMMT (ENSCDRG00005014543) #35	MRPL35 (ENSCDRG00005014433) #36	REEP1 (ENSCDRG00005014142) #37	KDM3A (ENSCDRG00005013998)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	19	CTNNA2 (ENSOARG00020002405) #8	LRRTM1 (ENSOARG00020002530) #7	ENSOARG00020002555	ENSOARG00020002597	SUCLG1 (ENSOARG00020002604) #9	DNAH6 (ENSOARG00020002647) #10	TMSB10 (ENSOARG00020002756)	KCMF1 (ENSOARG00020002774) #12	TCF7L1 (ENSOARG00020002813) #14	ENSOARG00020002845 #15	GGCX (ENSOARG00020002878) #21	ELMOD3 (ENSOARG00020002916) #17	CAPG (ENSOARG00020002936) #18	SH2D6 (ENSOARG00020002951) #19	MAT2A (ENSOARG00020002979) #20	ENSOARG00020002994 #22	VAMP5 (ENSOARG00020003011) #23	RNF181 (ENSOARG00020003033) #24	TMEM150A (ENSOARG00020003074) #25	C2orf68 (ENSOARG00020003094) #26	USP39 (ENSOARG00020003123) #27	SFTPB (ENSOARG00020003261) #28	ENSOARG00020003392 #29	ENSOARG00020003492 #29	ATOH8 (ENSOARG00020003526) #30	ST3GAL5 (ENSOARG00020003555) #31	POLR1A (ENSOARG00020003653) #33	PTCD3 (ENSOARG00020000168) #34	IMMT (ENSOARG00020000246) #35	MRPL35 (ENSOARG00020000311) #36	REEP1 (ENSOARG00020000378) #37
Rambouillet Sheep	MODERN SPECIES	12	ENSOARG00020008159	ENSOARG00020008182	ENSOARG00020008200	ENSOARG00020008220	ENSOARG00020008257	ENSOARG00020008272	ENSOARG00020008289	ENSOARG00020008313	ENSOARG00020008332	ENSOARG00020008348	ENSOARG00020008387	ENSOARG00020008400	ENSOARG00020008443	ABT1 (ENSOARG00020008475)	HMGN4 (ENSOARG00020008517)	ENSOARG00020008536 #22	BTN1A1 (ENSOARG00020008558)	BTN2A1 (ENSOARG00020008605)	ENSOARG00020008941	ENSOARG00020008979	ENSOARG00020008987	ENSOARG00020009000	ENSOARG00020009029	ENSOARG00020009051	ENSOARG00020009069	ENSOARG00020009082	ENSOARG00020009101	H1-3 (ENSOARG00020009112)	ENSOARG00020009146	ENSOARG00020009194	ENSOARG00020009213
Goat	MODERN SPECIES	2	ENSCHIG00000027191	SUCLG1 (ENSCHIG00000020517) #9	ENSCHIG00000025501 #10	ENSCHIG00000017397 #10	KCMF1 (ENSCHIG00000000578) #12	ENSCHIG00000009602	ENSCHIG00000009524	TCF7L1 (ENSCHIG00000010768) #14	ENSCHIG00000019585 #15	RETSAT (ENSCHIG00000007516) #16	ELMOD3 (ENSCHIG00000024857) #17	CAPG (ENSCHIG00000021024) #18	ENSCHIG00000009669 #19	MAT2A (ENSCHIG00000026409) #20	GGCX (ENSCHIG00000014770) #21	VAMP8 (ENSCHIG00000016859) #22	VAMP5 (ENSCHIG00000026930) #23	RNF181 (ENSCHIG00000008537) #24	TMEM150A (ENSCHIG00000020450) #25	C2orf68 (ENSCHIG00000026643) #26	USP39 (ENSCHIG00000021013) #27	SFTPB (ENSCHIG00000025259) #28	ENSCHIG00000016379 #29	ENSCHIG00000024407 #29	ATOH8 (ENSCHIG00000011327) #30	ST3GAL5 (ENSCHIG00000021591) #31	POLR1A (ENSCHIG00000018204) #33	PTCD3 (ENSCHIG00000012077) #34	IMMT (ENSCHIG00000026338) #35	MRPL35 (ENSCHIG00000016097) #36	REEP1 (ENSCHIG00000015577) #37
Bovinae	ANCESTRAL SPECIES	4	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00390000010045.k.a.a.a.a	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a.b #29	ENSGT00390000002975.a.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36
Bos	ANCESTRAL SPECIES	5	ENSGT00940000154447.j.b	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a.a.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37
Bos_b	ANCESTRAL SPECIES	16	ENSGT01030000234543.A.a #8	ENSGT01100000263508.B.a.b.b.b	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000165681 #11	ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.b	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a.a.a #29
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005011272	SUCLG1 (ENSBIXG00005005699) #9	DNAH6 (ENSBIXG00005011481) #10	ENSBIXG00005011532	ENSBIXG00005001125 #11	ENSBIXG00005011559	KCMF1 (ENSBIXG00005011582) #12	TCF7L1 (ENSBIXG00005011607) #14	ENSBIXG00005011629 #15	RETSAT (ENSBIXG00005001146) #16	ELMOD3 (ENSBIXG00005011661) #17	CAPG (ENSBIXG00005011729) #18	ENSBIXG00005011750 #19	MAT2A (ENSBIXG00005011796) #20	GGCX (ENSBIXG00005011842) #21	VAMP8 (ENSBIXG00005011878) #22	VAMP5 (ENSBIXG00005001186) #23	RNF181 (ENSBIXG00005011916) #24	TMEM150A (ENSBIXG00005011956) #25	C2orf68 (ENSBIXG00005011982) #26	USP39 (ENSBIXG00005012067) #27	SFTPB (ENSBIXG00005012111) #28	ENSBIXG00005012133 #29	ENSBIXG00005012155	ENSBIXG00005012225 #29	ATOH8 (ENSBIXG00005001275) #30	ST3GAL5 (ENSBIXG00005000387) #31	POLR1A (ENSBIXG00005012344) #33	PTCD3 (ENSBIXG00005012368) #34	IMMT (ENSBIXG00005012441) #35	MRPL35 (ENSBIXG00005001353) #36
Cow	MODERN SPECIES	2	ENSBTAG00000050900	SUCLG1 (ENSBTAG00000006075) #9	DNAH6 (ENSBTAG00000049566) #10	TMSB10 (ENSBTAG00000005654) #11	ENSBTAG00000048762	KCMF1 (ENSBTAG00000020630) #12	HIGD1A (ENSBTAG00000031731)	TCF7L1 (ENSBTAG00000010111) #14	ENSBTAG00000038116 #15	RETSAT (ENSBTAG00000021934) #16	ELMOD3 (ENSBTAG00000021935) #17	CAPG (ENSBTAG00000005432) #18	ENSBTAG00000048587 #19	MAT2A (ENSBTAG00000020873) #20	GGCX (ENSBTAG00000038477) #21	VAMP8 (ENSBTAG00000023997) #22	VAMP5 (ENSBTAG00000018285) #23	RNF181 (ENSBTAG00000018286) #24	TMEM150A (ENSBTAG00000018289) #25	C11H2orf68 (ENSBTAG00000018291) #26	USP39 (ENSBTAG00000010691) #27	SFTPB (ENSBTAG00000021230) #28	ENSBTAG00000031828 #29	GNLY (ENSBTAG00000053497) #29	ENSBTAG00000047449 #29	ENSBTAG00000039981	ENSBTAG00000047816 #29	ATOH8 (ENSBTAG00000024000) #30	ST3GAL5 (ENSBTAG00000011601) #31	POLR1A (ENSBTAG00000006481) #33	PTCD3 (ENSBTAG00000006482) #34
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000154447.j.b	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.b #29	ENSGT00390000002975.a.a.a #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00390000016950.g	ENSGT00920000149138 #33	ENSGT00390000016876.e #34	ENSGT00390000016876.f #34	ENSGT00390000002313 #35
Wild yak	MODERN SPECIES	422						TMSB10 (ENSBMUG00000025623)	KCMF1 (ENSBMUG00000025612) #12	TCF7L1 (ENSBMUG00000025596) #14	ENSBMUG00000025576 #15	RETSAT (ENSBMUG00000025572) #16	ELMOD3 (ENSBMUG00000025564) #17	CAPG (ENSBMUG00000025555) #18	ENSBMUG00000025549	MAT2A (ENSBMUG00000025546) #20	GGCX (ENSBMUG00000025542) #21	VAMP8 (ENSBMUG00000025534) #22	VAMP5 (ENSBMUG00000025532) #23	RNF181 (ENSBMUG00000025527) #24	TMEM150A (ENSBMUG00000025520) #25	C2orf68 (ENSBMUG00000025510) #26	USP39 (ENSBMUG00000025495) #27	SFTPB (ENSBMUG00000025482) #28	ENSBMUG00000025477 #29
Domestic yak	MODERN SPECIES	28	ENSBGRG00000006853	ENSBGRG00000006831	SUCLG1 (ENSBGRG00000006774) #9	DNAH6 (ENSBGRG00000006436) #10	TMSB10 (ENSBGRG00000006399)	KCMF1 (ENSBGRG00000006294) #12	ENSBGRG00000006276	TCF7L1 (ENSBGRG00000006205) #14	ENSBGRG00000006196 #15	RETSAT (ENSBGRG00000006129) #16	ELMOD3 (ENSBGRG00000005978) #17	CAPG (ENSBGRG00000005930) #18	SH2D6 (ENSBGRG00000005852) #19	MAT2A (ENSBGRG00000005776) #20	GGCX (ENSBGRG00000005624) #21	VAMP8 (ENSBGRG00000005579) #22	VAMP5 (ENSBGRG00000005556) #23	RNF181 (ENSBGRG00000005520) #24	TMEM150A (ENSBGRG00000005475) #25	C2orf68 (ENSBGRG00000005435) #26	USP39 (ENSBGRG00000004978) #27	SFTPB (ENSBGRG00000004867) #28	ENSBGRG00000004844 #29	ENSBGRG00000004722 #29	ATOH8 (ENSBGRG00000004693) #30	ST3GAL5 (ENSBGRG00000004605) #31	ENSBGRG00000004581	POLR1A (ENSBGRG00000004230) #33	ENSBGRG00000004172 #34	ENSBGRG00000004052 #34	IMMT (ENSBGRG00000003684) #35
American bison	MODERN SPECIES	3338				SUCLG1 (ENSBBBG00000020010) #9	DNAH6 (ENSBBBG00000019994) #10	TMSB10 (ENSBBBG00000019860)	ENSBBBG00000019847 #12	TCF7L1 (ENSBBBG00000019828) #14	ENSBBBG00000019799 #15	RETSAT (ENSBBBG00000019791) #16	ELMOD3 (ENSBBBG00000019773) #17	CAPG (ENSBBBG00000005165) #18	ENSBBBG00000019725 #19	MAT2A (ENSBBBG00000019713) #20	GGCX (ENSBBBG00000019704) #21	VAMP8 (ENSBBBG00000007673) #22	VAMP5 (ENSBBBG00000019660) #23	RNF181 (ENSBBBG00000005186) #24	TMEM150A (ENSBBBG00000019657) #25	USP39 (ENSBBBG00000019591) #27	SFTPB (ENSBBBG00000005209) #28	ENSBBBG00000019476 #29	ENSBBBG00000005222	ENSBBBG00000006905 #29	ATOH8 (ENSBBBG00000005211) #30	ST3GAL5 (ENSBBBG00000019418) #31	ENSBBBG00000019343	POLR1A (ENSBBBG00000007513) #33	PTCD3 (ENSBBBG00000007099) #34	IMMT (ENSBBBG00000019237) #35	MRPL35 (ENSBBBG00000019211) #36
Siberian musk deer	MODERN SPECIES	243			ENSMMSG00000010974	SUCLG1 (ENSMMSG00000011015) #9	DNAH6 (ENSMMSG00000011077) #10	ENSMMSG00000011387 #11	KCMF1 (ENSMMSG00000011415) #12	TCF7L1 (ENSMMSG00000011504) #14	ENSMMSG00000011551	RETSAT (ENSMMSG00000011571) #16	ELMOD3 (ENSMMSG00000011616) #17	CAPG (ENSMMSG00000011668) #18	SH2D6 (ENSMMSG00000011734) #19	ENSMMSG00000011818 #20	GGCX (ENSMMSG00000011896) #21	VAMP8 (ENSMMSG00000011993) #22	VAMP5 (ENSMMSG00000012013) #23	RNF181 (ENSMMSG00000012036) #24	TMEM150A (ENSMMSG00000012073) #25	C2orf68 (ENSMMSG00000012110) #26	USP39 (ENSMMSG00000012147) #27	SFTPB (ENSMMSG00000012359) #28	ENSMMSG00000012385 #29	ATOH8 (ENSMMSG00000012402) #30	ST3GAL5 (ENSMMSG00000012427) #31	POLR1A (ENSMMSG00000012542) #33	PTCD3 (ENSMMSG00000012741) #34	IMMT (ENSMMSG00000012806) #35	MRPL35 (ENSMMSG00000012898) #36	REEP1 (ENSMMSG00000012954) #37	KDM3A (ENSMMSG00000013019)
Yarkand deer	MODERN SPECIES	2	CTNNA2 (ENSCHYG00000011228) #8	ENSCHYG00000011081	SUCLG1 (ENSCHYG00000010947) #9	DNAH6 (ENSCHYG00000010726) #10	TMSB10 (ENSCHYG00000010662)	KCMF1 (ENSCHYG00000010620) #12	TCF7L1 (ENSCHYG00000010256) #14	ENSCHYG00000010219 #15	ENSCHYG00000010201	RETSAT (ENSCHYG00000010029) #16	ELMOD3 (ENSCHYG00000009802) #17	ENSCHYG00000009746 #18	ENSCHYG00000009409 #19	MAT2A (ENSCHYG00000009334) #20	GGCX (ENSCHYG00000009020) #21	VAMP8 (ENSCHYG00000008959) #22	RNF181 (ENSCHYG00000008920) #24	TMEM150A (ENSCHYG00000008687) #25	C2orf68 (ENSCHYG00000008648) #26	USP39 (ENSCHYG00000008478) #27	SFTPB (ENSCHYG00000008422) #28	ENSCHYG00000008369 #29	ENSCHYG00000008347	ATOH8 (ENSCHYG00000008328) #30	ST3GAL5 (ENSCHYG00000008185) #31	POLR1A (ENSCHYG00000007959) #33	PTCD3 (ENSCHYG00000007717) #34	IMMT (ENSCHYG00000007615) #35	MRPL35 (ENSCHYG00000007551) #36	REEP1 (ENSCHYG00000007409) #37	KDM3A (ENSCHYG00000007307)
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Odontoceti	ANCESTRAL SPECIES	15	ENSGT01000000219921	ENSGT00550000074828.a.g.a	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT01000000219921	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000165681.d #11	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000165681.d #11	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00940000165659.a	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Narwhal	MODERN SPECIES	305	ENSMMNG00015006568	ENSMMNG00015006559	SUCLG1 (ENSMMNG00015006541) #9	DNAH6 (ENSMMNG00015006430) #10	ENSMMNG00015006372	TMSB10 (ENSMMNG00015006357)	KCMF1 (ENSMMNG00015006344) #12	TCF7L1 (ENSMMNG00015006319) #14	ENSMMNG00015006302 #15	RETSAT (ENSMMNG00015006280) #16	ELMOD3 (ENSMMNG00015006250) #17	CAPG (ENSMMNG00015006216) #18	SH2D6 (ENSMMNG00015006178) #19	MAT2A (ENSMMNG00015006153) #20	GGCX (ENSMMNG00015006106) #21	VAMP8 (ENSMMNG00015006072) #22	VAMP5 (ENSMMNG00015006056) #23	RNF181 (ENSMMNG00015006028) #24	TMEM150A (ENSMMNG00015005993) #25	C2orf68 (ENSMMNG00015005970) #26	USP39 (ENSMMNG00015005861) #27	SFTPB (ENSMMNG00015005711) #28	ATOH8 (ENSMMNG00015005651) #30	ST3GAL5 (ENSMMNG00015005607) #31	ENSMMNG00015005573	POLR1A (ENSMMNG00015005538) #33	PTCD3 (ENSMMNG00015005490) #34	IMMT (ENSMMNG00015005456) #35	MRPL35 (ENSMMNG00015005420) #36	REEP1 (ENSMMNG00015005391) #37	KDM3A (ENSMMNG00015005358)
Beluga whale	MODERN SPECIES	61	CTNNA2 (ENSDLEG00000015448) #8	ENSDLEG00000015731	ENSDLEG00000015822	SUCLG1 (ENSDLEG00000015835) #9	DNAH6 (ENSDLEG00000015865) #10	ENSDLEG00000015940 #11	KCMF1 (ENSDLEG00000015950) #12	TCF7L1 (ENSDLEG00000016012) #14	ENSDLEG00000016031 #15	RETSAT (ENSDLEG00000016040) #16	ELMOD3 (ENSDLEG00000016055) #17	CAPG (ENSDLEG00000016089) #18	ENSDLEG00000016109	MAT2A (ENSDLEG00000016119) #20	GGCX (ENSDLEG00000016129) #21	VAMP8 (ENSDLEG00000016147) #22	VAMP5 (ENSDLEG00000016153) #23	RNF181 (ENSDLEG00000016163) #24	TMEM150A (ENSDLEG00000016207) #25	CUNH2orf68 (ENSDLEG00000016225) #26	USP39 (ENSDLEG00000016236) #27	ENSDLEG00000016291 #28	ATOH8 (ENSDLEG00000016446) #30	ST3GAL5 (ENSDLEG00000016463) #31	ENSDLEG00000016502	POLR1A (ENSDLEG00000016519) #33	PTCD3 (ENSDLEG00000016579) #34	IMMT (ENSDLEG00000016629) #35	MRPL35 (ENSDLEG00000016654) #36	REEP1 (ENSDLEG00000016669) #37	KDM3A (ENSDLEG00000016750)
Dolphin	MODERN SPECIES	1097									TCF7L1 (ENSTTRG00000008959) #14	RETSAT (ENSTTRG00000008962) #16	ENSTTRG00000008963 #17	CAPG (ENSTTRG00000008964) #18	ENSTTRG00000008965 #19	MAT2A (ENSTTRG00000008966) #20	GGCX (ENSTTRG00000008967) #21	VAMP8 (ENSTTRG00000008968) #22	VAMP5 (ENSTTRG00000008969) #23	RNF181 (ENSTTRG00000008970) #24	TMEM150A (ENSTTRG00000008971) #25	C2orf68 (ENSTTRG00000008972) #26	USP39 (ENSTTRG00000008973) #27	SFTPB (ENSTTRG00000008974) #28
Sperm whale	MODERN SPECIES	531																VAMP8 (ENSPCTG00005021132) #22	VAMP5 (ENSPCTG00005021120) #23	RNF181 (ENSPCTG00005021092) #24	CUNH2orf68 (ENSPCTG00005021019) #25
Blue whale	MODERN SPECIES	4	CTNNA2 (ENSBMSG00010019658) #8	ENSBMSG00010019485	SUCLG1 (ENSBMSG00010019445) #9	DNAH6 (ENSBMSG00010018565) #10	ENSBMSG00010018427	TRABD2A (ENSBMSG00010018310)	TMSB10 (ENSBMSG00010018283)	KCMF1 (ENSBMSG00010018181) #12	TCF7L1 (ENSBMSG00010018055) #14	RETSAT (ENSBMSG00010018024) #16	ELMOD3 (ENSBMSG00010017999) #17	CAPG (ENSBMSG00010017946) #18	SH2D6 (ENSBMSG00010017841) #19	MAT2A (ENSBMSG00010017771) #20	GGCX (ENSBMSG00010017708) #21	VAMP8 (ENSBMSG00010017652) #22	VAMP5 (ENSBMSG00010017623) #23	RNF181 (ENSBMSG00010017562) #24	TMEM150A (ENSBMSG00010017376) #25	C2orf68 (ENSBMSG00010017326) #26	USP39 (ENSBMSG00010017135) #27	ENSBMSG00010017087 #28	ENSBMSG00010017048 #28	ATOH8 (ENSBMSG00010017024) #30	ST3GAL5 (ENSBMSG00010016994) #31	ENSBMSG00010016964	ENSBMSG00010016939	POLR1A (ENSBMSG00010016886) #33	PTCD3 (ENSBMSG00010016832) #34	IMMT (ENSBMSG00010016688) #35	MRPL35 (ENSBMSG00010016621) #36
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Caniformia	ANCESTRAL SPECIES	18	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES	25	ENSGT00940000161705 #7	ENSGT00940000164757	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b.c #22	ENSGT00730000111371.c #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.c #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000161705 #7	ENSGT00940000164757	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b.c #22	ENSGT00730000111371.c #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975.c #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Dog	MODERN SPECIES	8	ENSCAFG00845014940	SUCLG1 (ENSCAFG00845014907) #9	ENSCAFG00845014884	DNAH6 (ENSCAFG00845014818) #10	TRABD2A (ENSCAFG00845014743)	ENSCAFG00845014717	ENSCAFG00845014677 #12	TCF7L1 (ENSCAFG00845014626) #14	ENSCAFG00845014600 #15	RETSAT (ENSCAFG00845014569) #16	ELMOD3 (ENSCAFG00845014524) #17	CAPG (ENSCAFG00845014410) #18	SH2D6 (ENSCAFG00845014343) #19	MAT2A (ENSCAFG00845014310) #20	GGCX (ENSCAFG00845014233) #21	VAMP8 (ENSCAFG00845014183) #22	VAMP5 (ENSCAFG00845014173) #23	RNF181 (ENSCAFG00845014162) #24	TMEM150A (ENSCAFG00845014140) #25	C17H2orf68 (ENSCAFG00845014119) #26	USP39 (ENSCAFG00845014083) #27	SFTPB (ENSCAFG00845014035) #28	ENSCAFG00845013982 #29	ENSCAFG00845013890 #29	ATOH8 (ENSCAFG00845013832) #30	ST3GAL5 (ENSCAFG00845013809) #31	POLR1A (ENSCAFG00845013628) #33	PTCD3 (ENSCAFG00845013553) #34	IMMT (ENSCAFG00845013443) #35	MRPL35 (ENSCAFG00845013398) #36	REEP1 (ENSCAFG00845013348) #37
Dingo	MODERN SPECIES	223	DNAH6 (ENSCAFG00020014555) #10	ENSCAFG00020014589	TRABD2A (ENSCAFG00020014595)	ENSCAFG00020014598	ENSCAFG00020014600	ENSCAFG00020014601 #12	ENSCAFG00020014602 #12	TCF7L1 (ENSCAFG00020014607) #14	ENSCAFG00020014645 #15	RETSAT (ENSCAFG00020014651) #16	ELMOD3 (ENSCAFG00020014656) #17	CAPG (ENSCAFG00020014661) #18	ENSCAFG00020014664 #19	MAT2A (ENSCAFG00020014669) #20	GGCX (ENSCAFG00020014674) #21	ENSCAFG00020014679 #22	ENSCAFG00020014680 #23	RNF181 (ENSCAFG00020014682) #24	TMEM150A (ENSCAFG00020014685) #25	C2orf68 (ENSCAFG00020014687) #26	USP39 (ENSCAFG00020014690) #27	SFTPB (ENSCAFG00020014705) #28	ENSCAFG00020014715 #29	ATOH8 (ENSCAFG00020014718) #30	ST3GAL5 (ENSCAFG00020014720) #31	POLR1A (ENSCAFG00020014752) #33	PTCD3 (ENSCAFG00020015827) #34	IMMT (ENSCAFG00020015997) #35	MRPL35 (ENSCAFG00020016017) #36	REEP1 (ENSCAFG00020016020) #37	KDM3A (ENSCAFG00020016056)
Red fox	MODERN SPECIES	16	LRRTM1 (ENSVVUG00000003240) #7	CTNNA2 (ENSVVUG00000003221) #8	ENSVVUG00000003155	SUCLG1 (ENSVVUG00000003108) #9	DNAH6 (ENSVVUG00000002546) #10	TRABD2A (ENSVVUG00000002449)	KCMF1 (ENSVVUG00000002440) #12	TCF7L1 (ENSVVUG00000001883) #14	TGOLN2 (ENSVVUG00000001860) #15	RETSAT (ENSVVUG00000001843) #16	ELMOD3 (ENSVVUG00000001825) #17	CAPG (ENSVVUG00000001799) #18	ENSVVUG00000001782 #19	MAT2A (ENSVVUG00000001771) #20	GGCX (ENSVVUG00000001756) #21	VAMP8 (ENSVVUG00000001728) #22	ENSVVUG00000001721 #23	RNF181 (ENSVVUG00000001710) #24	TMEM150A (ENSVVUG00000001694) #25	CUNH2orf68 (ENSVVUG00000001683) #26	USP39 (ENSVVUG00000001660) #27	SFTPB (ENSVVUG00000001389) #28	ENSVVUG00000001345	ENSVVUG00000001338 #29	ATOH8 (ENSVVUG00000001304) #30	ST3GAL5 (ENSVVUG00000001293) #31	POLR1A (ENSVVUG00000001245) #33	PTCD3 (ENSVVUG00000001203) #34	IMMT (ENSVVUG00000000129) #35	MRPL35 (ENSVVUG00000000063) #36	REEP1 (ENSVVUG00000028774) #37
Canidae	ANCESTRAL SPECIES																	ENSGT00940000160325.b.d #22
Canis_lupus	ANCESTRAL SPECIES	30	ENSGT00940000153692.A	ENSGT00950000183015.D	ENSGT00940000155680.d	ENSGT00940000158223	ENSGT00940000160897	ENSGT00940000155440.d.j	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000156240.f	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000160325.b.d #22	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b	ENSGT00940000162090	ENSGT01030000234578.A.a ##25	ENSGT00440000039914	ENSGT00940000154426.b.b.x.a	ENSGT00940000158010	ENSGT00390000016988.a.a.a.a.a.a.b.b	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000158449
Dog	MODERN SPECIES	25	WDFY3 (ENSCAFG00845022217)	CDS1 (ENSCAFG00845022114)	ENSCAFG00845022070	NKX6-1 (ENSCAFG00845022031)	ENSCAFG00845022001	GPAT3 (ENSCAFG00845021887)	ABRAXAS1 (ENSCAFG00845021759)	MRPS18C (ENSCAFG00845021626)	ENSCAFG00845021572	ENSCAFG00845021505	HPSE (ENSCAFG00845021381)	COQ2 (ENSCAFG00845021322)	ENSCAFG00845021294	ENSCAFG00845021212	PLAC8B (ENSCAFG00845021150)	ENSCAFG00845021087 #22	LIN54 (ENSCAFG00845020955)	THAP9 (ENSCAFG00845020757)	SEC31A (ENSCAFG00845019603)	SCD5 (ENSCAFG00845019428)	ENSCAFG00845019398	TMEM150C (ENSCAFG00845019337) ##25	ENOPH1 (ENSCAFG00845019277)	HNRNPDL (ENSCAFG00845018924)	HNRNPD (ENSCAFG00845018743)	ENSCAFG00845018639	RASGEF1B (ENSCAFG00845018382)	PRKG2 (ENSCAFG00845018088)	BMP3 (ENSCAFG00845017996)	CFAP299 (ENSCAFG00845017920)	FGF5 (ENSCAFG00845017837)
Dingo	MODERN SPECIES	342	MAPK10 (ENSCAFG00020009946)	ARHGAP24 (ENSCAFG00020010087)	WDFY3 (ENSCAFG00020010121)	CDS1 (ENSCAFG00020010454)	NKX6-1 (ENSCAFG00020010474)	ENSCAFG00020010476	GPAT3 (ENSCAFG00020010481)	ABRAXAS1 (ENSCAFG00020010484)	MRPS18C (ENSCAFG00020010491)	HELQ (ENSCAFG00020010495)	HPSE (ENSCAFG00020010498)	COQ2 (ENSCAFG00020010543)	ENSCAFG00020010561	ENSCAFG00020010564	PLAC8 (ENSCAFG00020010575)	ENSCAFG00020010578 #22	COPS4 (ENSCAFG00020010592)	LIN54 (ENSCAFG00020010600)	ENSCAFG00020010647	SEC31A (ENSCAFG00020010660)	SCD5 (ENSCAFG00020010695)	TMEM150C (ENSCAFG00020010697) ##25	ENOPH1 (ENSCAFG00020010698)	HNRNPDL (ENSCAFG00020010699)	HNRNPD (ENSCAFG00020010713)	ENSCAFG00020010723	ENSCAFG00020010724	RASGEF1B (ENSCAFG00020010726)	PRKG2 (ENSCAFG00020010735)	BMP3 (ENSCAFG00020010793)	ENSCAFG00020010807
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Ursidae	ANCESTRAL SPECIES	9	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000165681 #11	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305.b #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Ursus	ANCESTRAL SPECIES	55	ENSGT00940000162300.n	ENSGT00940000162300.m	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305.b #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Polar bear	MODERN SPECIES	223	ENSUMAG00000006060 #8	LRRTM1 (ENSUMAG00000006088) #7	ENSUMAG00000006122 #8	ENSUMAG00000006177	SUCLG1 (ENSUMAG00000006187) #9	DNAH6 (ENSUMAG00000006234) #10	KCMF1 (ENSUMAG00000006381) #12	TCF7L1 (ENSUMAG00000006395) #14	ENSUMAG00000006403 #15	RETSAT (ENSUMAG00000006406) #16	ELMOD3 (ENSUMAG00000006414) #17	CAPG (ENSUMAG00000006430) #18	ENSUMAG00000006447 #19	MAT2A (ENSUMAG00000006459) #20	GGCX (ENSUMAG00000006501) #21	VAMP8 (ENSUMAG00000006509) #22	ENSUMAG00000006511 #23	RNF181 (ENSUMAG00000006514) #24	TMEM150A (ENSUMAG00000006515) #25	C2orf68 (ENSUMAG00000006518) #26	USP39 (ENSUMAG00000006527) #27	SFTPB (ENSUMAG00000006563) #28	ENSUMAG00000006576 #29	ST3GAL5 (ENSUMAG00000006591) #31	POLR1A (ENSUMAG00000006700) #33	PTCD3 (ENSUMAG00000007839) #34	IMMT (ENSUMAG00000007873) #35	MRPL35 (ENSUMAG00000007891) #36	REEP1 (ENSUMAG00000007896) #37	KDM3A (ENSUMAG00000007948)	CHMP3 (ENSUMAG00000007971)
American black bear	MODERN SPECIES	520							KCMF1 (ENSUAMG00000027562) #12	TCF7L1 (ENSUAMG00000027565) #14	ENSUAMG00000027574 #15	RETSAT (ENSUAMG00000027577) #16	ELMOD3 (ENSUAMG00000027578) #17	CAPG (ENSUAMG00000027580) #18	ENSUAMG00000027581 #19	MAT2A (ENSUAMG00000027582) #20	GGCX (ENSUAMG00000027583) #21	VAMP8 (ENSUAMG00000027584) #22	VAMP5 (ENSUAMG00000027585) #23	RNF181 (ENSUAMG00000027586) #24	TMEM150A (ENSUAMG00000027587) #25	C2orf68 (ENSUAMG00000027589) #26	USP39 (ENSUAMG00000027590) #27	SFTPB (ENSUAMG00000027593) #28
Giant Panda	MODERN SPECIES	14	ENSAMEG00000030394	CTNNA2 (ENSAMEG00000010800) #8	LRRTM1 (ENSAMEG00000019333) #7	ENSAMEG00000018718	SUCLG1 (ENSAMEG00000001962) #9	DNAH6 (ENSAMEG00000002004) #10	TRABD2A (ENSAMEG00000002027)	TCF7L1 (ENSAMEG00000002051) #14	ENSAMEG00000031071 #15	RETSAT (ENSAMEG00000002091) #16	ENSAMEG00000002137 #17	CAPG (ENSAMEG00000002173) #18	ENSAMEG00000028845 #19	MAT2A (ENSAMEG00000002191) #20	GGCX (ENSAMEG00000002214) #21	VAMP8 (ENSAMEG00000002268) #22	VAMP5 (ENSAMEG00000031349) #23	USP39 (ENSAMEG00000002291) #27	ENSAMEG00000002282 #25	C2orf68 (ENSAMEG00000002290) #26	SFTPB (ENSAMEG00000002317) #28	ATOH8 (ENSAMEG00000025438) #30	ST3GAL5 (ENSAMEG00000005791) #31	POLR1A (ENSAMEG00000005807) #33	PTCD3 (ENSAMEG00000005861) #34	IMMT (ENSAMEG00000005919) #35	MRPL35 (ENSAMEG00000005978) #36	REEP1 (ENSAMEG00000024084) #37	KDM3A (ENSAMEG00000009939)	CHMP3 (ENSAMEG00000009971)	RNF103 (ENSAMEG00000009973)
Mustelinae	ANCESTRAL SPECIES	16	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Ferret	MODERN SPECIES	169	ENSMPUG00000008534 #8	LRRTM1 (ENSMPUG00000018841) #7	ENSMPUG00000008539 #8	SUCLG1 (ENSMPUG00000008566) #9	DNAH6 (ENSMPUG00000008574) #10	TRABD2A (ENSMPUG00000008622)	KCMF1 (ENSMPUG00000008632) #12	TCF7L1 (ENSMPUG00000008657) #14	ENSMPUG00000008755 #15	RETSAT (ENSMPUG00000008763) #16	ELMOD3 (ENSMPUG00000008834) #17	CAPG (ENSMPUG00000008841) #18	SH2D6 (ENSMPUG00000008909) #19	MAT2A (ENSMPUG00000008933) #20	GGCX (ENSMPUG00000009028) #21	VAMP8 (ENSMPUG00000009038) #22	VAMP5 (ENSMPUG00000009046) #23	RNF181 (ENSMPUG00000009053) #24	TMEM150A (ENSMPUG00000009058) #25	C2orf68 (ENSMPUG00000009069) #26	USP39 (ENSMPUG00000009096) #27	SFTPB (ENSMPUG00000009109) #28	ENSMPUG00000009117 #29	ATOH8 (ENSMPUG00000009121) #30	ST3GAL5 (ENSMPUG00000009127) #31	POLR1A (ENSMPUG00000009135) #33	PTCD3 (ENSMPUG00000009167) #34	IMMT (ENSMPUG00000009193) #35	MRPL35 (ENSMPUG00000009217) #36	REEP1 (ENSMPUG00000009225) #37	KDM3A (ENSMPUG00000009253)
American mink	MODERN SPECIES	8	LRRTM1 (ENSNVIG00000019580) #7	CTNNA2 (ENSNVIG00000019316) #8	SUCLG1 (ENSNVIG00000019244) #9	DNAH6 (ENSNVIG00000019022) #10	TRABD2A (ENSNVIG00000018979)	TMSB10 (ENSNVIG00000018969)	KCMF1 (ENSNVIG00000018936) #12	TCF7L1 (ENSNVIG00000018900) #14	ENSNVIG00000018872 #15	RETSAT (ENSNVIG00000018862) #16	ELMD3 (ENSNVIG00000018754) #17	CAPG (ENSNVIG00000018696) #18	ENSNVIG00000018664 #19	MAT2A (ENSNVIG00000018646) #20	GGCX (ENSNVIG00000018617) #21	VAMP8 (ENSNVIG00000018603) #22	VAMP5 (ENSNVIG00000018599) #23	RNF181 (ENSNVIG00000018591) #24	TMEM150A (ENSNVIG00000018553) #25	C2orf68 (ENSNVIG00000018547) #26	ENSNVIG00000018464 #27	SFTPB (ENSNVIG00000018449) #28	ATOH8 (ENSNVIG00000018445) #30	ST3GAL5 (ENSNVIG00000018397) #31	POLR1A (ENSNVIG00000018346) #33	PTCD3 (ENSNVIG00000018319) #34	IMMT (ENSNVIG00000018239) #35	MRPL35 (ENSNVIG00000018218) #36	REEP1 (ENSNVIG00000018129) #37	KDM3A (ENSNVIG00000018097)	CHMP3 (ENSNVIG00000018078)
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000161705 #7	ENSGT00940000154818.a.b	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547.k #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Panthera	ANCESTRAL SPECIES	2	ENSGT01030000234543.A.a #8	ENSGT00940000154818.a.b	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547.k #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
Tiger	MODERN SPECIES	170							KCMF1 (ENSPTIG00000012661) #12	TCF7L1 (ENSPTIG00000012726) #14	ENSPTIG00000012874 #15	RETSAT (ENSPTIG00000012901) #16	ELMOD3 (ENSPTIG00000012942) #17	CAPG (ENSPTIG00000013355) #18	ENSPTIG00000013587 #19	MAT2A (ENSPTIG00000013684) #20	GGCX (ENSPTIG00000013923) #21	VAMP8 (ENSPTIG00000014405) #22	VAMP5 (ENSPTIG00000014511) #23	RNF181 (ENSPTIG00000014685) #24	TMEM150A (ENSPTIG00000015089) #25	C2orf68 (ENSPTIG00000015638) #26	USP39 (ENSPTIG00000015767) #27	SFTPB (ENSPTIG00000016782) #28	ST3GAL5 (ENSPTIG00000017771) #31	POLR1A (ENSPTIG00000018783) #33	PTCD3 (ENSPTIG00000019091) #34	IMMT (ENSPTIG00000019189) #35	ENSPTIG00000019867 #36	REEP1 (ENSPTIG00000020564) #37	KDM3A (ENSPTIG00000003722)	CHMP3 (ENSPTIG00000008355)	RNF103 (ENSPTIG00000008667)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547.k #36	ENSGT00940000159532 #37	ENSGT00940000160135	ENSGT00950000182832.C
leopard	MODERN SPECIES		ENSPPRG00000007459	ENSPPRG00000007449	ENSPPRG00000020355	SUCLG1 (ENSPPRG00000007440) #9	DNAH6 (ENSPPRG00000007406) #10	TRABD2A (ENSPPRG00000007266)	KCMF1 (ENSPPRG00000007234) #12	TCF7L1 (ENSPPRG00000007227) #14	ENSPPRG00000007210 #15	RETSAT (ENSPPRG00000007198) #16	ELMOD3 (ENSPPRG00000007176) #17	CAPG (ENSPPRG00000007161) #18	ENSPPRG00000007139 #19	MAT2A (ENSPPRG00000007128) #20	GGCX (ENSPPRG00000007103) #21	VAMP8 (ENSPPRG00000007071) #22	VAMP5 (ENSPPRG00000007056) #23	RNF181 (ENSPPRG00000007048) #24	TMEM150A (ENSPPRG00000007030) #25	C2orf68 (ENSPPRG00000006996) #26	USP39 (ENSPPRG00000006971) #27	SFTPB (ENSPPRG00000006829) #28	ATOH8 (ENSPPRG00000006780) #30	ST3GAL5 (ENSPPRG00000006759) #31	POLR1A (ENSPPRG00000006702) #33	PTCD3 (ENSPPRG00000006644) #34	IMMT (ENSPPRG00000006625) #35	ENSPPRG00000006561 #36	REEP1 (ENSPPRG00000006542) #37	KDM3A (ENSPPRG00000006509)	CHMP3 (ENSPPRG00000006445)
lion	MODERN SPECIES	3	ENSPLOG00000002329	ENSPLOG00000002306	SUCLG1 (ENSPLOG00000002282) #9	DNAH6 (ENSPLOG00000002257) #10	TRABD2A (ENSPLOG00000002215)	TMSB10 (ENSPLOG00000002183)	KCMF1 (ENSPLOG00000002171) #12	TCF7L1 (ENSPLOG00000002149) #14	ENSPLOG00000002132 #15	RETSAT (ENSPLOG00000002122) #16	ELMOD3 (ENSPLOG00000002100) #17	CAPG (ENSPLOG00000002073) #18	SH2D6 (ENSPLOG00000002043) #19	MAT2A (ENSPLOG00000002012) #20	GGCX (ENSPLOG00000001958) #21	VAMP8 (ENSPLOG00000001925) #22	VAMP5 (ENSPLOG00000001920) #23	RNF181 (ENSPLOG00000001904) #24	TMEM150A (ENSPLOG00000001876) #25	C2orf68 (ENSPLOG00000001851) #26	USP39 (ENSPLOG00000001816) #27	SFTPB (ENSPLOG00000001786) #28	ATOH8 (ENSPLOG00000001776) #30	ST3GAL5 (ENSPLOG00000001752) #31	POLR1A (ENSPLOG00000001675) #33	PTCD3 (ENSPLOG00000001609) #34	IMMT (ENSPLOG00000001563) #35	MRPL35 (ENSPLOG00000001537) #36	REEP1 (ENSPLOG00000001464) #37	KDM3A (ENSPLOG00000001402)	CHMP3 (ENSPLOG00000001384)
Cat	MODERN SPECIES	2	ENSFCAG00000039414	ENSFCAG00000031148	SUCLG1 (ENSFCAG00000005140) #9	DNAH6 (ENSFCAG00000000768) #10	TRABD2A (ENSFCAG00000000770)	TMSB10 (ENSFCAG00000046545)	KCMF1 (ENSFCAG00000044295) #12	TCF7L1 (ENSFCAG00000003376) #14	ENSFCAG00000037179 #15	RETSAT (ENSFCAG00000003377) #16	ELMOD3 (ENSFCAG00000003378) #17	CAPG (ENSFCAG00000003379) #18	SH2D6 (ENSFCAG00000003381) #19	MAT2A (ENSFCAG00000011965) #20	GGCX (ENSFCAG00000011967) #21	VAMP8 (ENSFCAG00000011968) #22	VAMP5 (ENSFCAG00000024700) #23	RNF181 (ENSFCAG00000011969) #24	TMEM150A (ENSFCAG00000024246) #25	CA3H2orf68 (ENSFCAG00000028683) #26	USP39 (ENSFCAG00000011972) #27	SFTPB (ENSFCAG00000018868) #28	ATOH8 (ENSFCAG00000038037) #30	ST3GAL5 (ENSFCAG00000015447) #31	POLR1A (ENSFCAG00000008966) #33	PTCD3 (ENSFCAG00000008967) #34	IMMT (ENSFCAG00000008968) #35	ENSFCAG00000040448 #36	REEP1 (ENSFCAG00000008970) #37	KDM3A (ENSFCAG00000010506)	CHMP3 (ENSFCAG00000039184)
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Chiroptera	ANCESTRAL SPECIES	10	ENSGT01030000234543.A.a #8	ENSGT00940000160433.a	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00910000146589	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000161705 #7	ENSGT01030000234543.A.a #8	ENSGT00940000160433.a	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000163007	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00910000146589	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Microbat	MODERN SPECIES	1706														MAT2A (ENSMLUG00000005348) #20	GGCX (ENSMLUG00000005356) #21	VAMP8 (ENSMLUG00000005363) #22	VAMP5 (ENSMLUG00000028456) #23	RNF181 (ENSMLUG00000027738) #24	TMEM150A (ENSMLUG00000026810) #25	C2orf68 (ENSMLUG00000005365) #26	USP39 (ENSMLUG00000005367) #27	SFTPB (ENSMLUG00000005372) #28	ENSMLUG00000001579 #29
Greater horseshoe bat	MODERN SPECIES	4	CTNNA2 (ENSRFEG00010013591) #8	ENSRFEG00010013508	SUCLG1 (ENSRFEG00010013453) #9	DNAH6 (ENSRFEG00010012455) #10	TMSB10 (ENSRFEG00010012256)	KCMF1 (ENSRFEG00010012206) #12	ENSRFEG00010012190	TCF7L1 (ENSRFEG00010012140) #14	ENSRFEG00010012085 #15	RETSAT (ENSRFEG00010012053) #16	ELMOD3 (ENSRFEG00010011983) #17	CAPG (ENSRFEG00010011887) #18	ENSRFEG00010011863	MAT2A (ENSRFEG00010011814) #20	GGCX (ENSRFEG00010011702) #21	VAMP8 (ENSRFEG00010011634) #22	ENSRFEG00010011487 #23	TMEM150A (ENSRFEG00010011398) #25	C2orf68 (ENSRFEG00010011347) #26	USP39 (ENSRFEG00010010822) #27	SFTPB (ENSRFEG00010010754) #28	ENSRFEG00010010730 #29	ATOH8 (ENSRFEG00010010652) #30	ST3GAL5 (ENSRFEG00010010531) #31	POLR1A (ENSRFEG00010010422) #33	PTCD3 (ENSRFEG00010010292) #34	IMMT (ENSRFEG00010009645) #35	MRPL35 (ENSRFEG00010009536) #36	REEP1 (ENSRFEG00010009322) #37	KDM3A (ENSRFEG00010009255)	CHMP3 (ENSRFEG00010009136)
Megabat	MODERN SPECIES	2127														MAT2A (ENSPVAG00000015346) #20	GGCX (ENSPVAG00000015347) #21	VAMP8 (ENSPVAG00000015348) #22	VAMP5 (ENSPVAG00000015351) #23	RNF181 (ENSPVAG00000015352) #24	TMEM150A (ENSPVAG00000015354) #25	C2orf68 (ENSPVAG00000015355) #26	USP39 (ENSPVAG00000015356) #27	SFTPB (ENSPVAG00000015359) #28	ENSPVAG00000015360 #29
Equus	ANCESTRAL SPECIES	7	ENSGT01030000234543.A.a #8	ENSGT00940000161705 #7	ENSGT00940000156351 #9	ENSGT00940000154761 #10	ENSGT00940000162805	ENSGT00940000165681 #11	ENSGT00510000047171 #12	ENSGT00940000157038 #14	ENSGT00530000064712 #15	ENSGT00390000017613 #16	ENSGT00390000009488 #17	ENSGT00940000159305 #18	ENSGT00940000162822 #19	ENSGT00950000183185.c.a.a #20	ENSGT00390000014909 #21	ENSGT00940000160325.b #22	ENSGT00730000111371 #23	ENSGT00940000160552 #24	ENSGT01030000234578.A.b.a.a.b #25	ENSGT00390000001901 #26	ENSGT00390000007992 #27	ENSGT00940000161711 #28	ENSGT00390000002975 #29	ENSGT00940000161151 #30	ENSGT00940000157929 #31	ENSGT00920000149138 #33	ENSGT00390000016876 #34	ENSGT00390000002313 #35	ENSGT00390000007547 #36	ENSGT00940000159532 #37	ENSGT00940000160135
Horse	MODERN SPECIES	6	ENSECAG00000046045 #9	ENSECAG00000057371 #9	ENSECAG00000059635 #9	DNAH6 (ENSECAG00000011573) #10	ENSECAG00000038584	KCMF1 (ENSECAG00000024834) #12	TRABD2A (ENSECAG00000010499)	TCF7L1 (ENSECAG00000022931) #14	ENSECAG00000037048 #15	RETSAT (ENSECAG00000010342) #16	ELMOD3 (ENSECAG00000020629) #17	CAPG (ENSECAG00000015128) #18	SH2D6 (ENSECAG00000013097) #19	MAT2A (ENSECAG00000007391) #20	GGCX (ENSECAG00000010458) #21	VAMP8 (ENSECAG00000009514) #22	VAMP5 (ENSECAG00000007788) #23	RNF181 (ENSECAG00000000327)	TMEM150A (ENSECAG00000017462) #25	USP39 (ENSECAG00000002856) #27	SFTPB (ENSECAG00000019375) #28	GNLY (ENSECAG00000015819) #29	ATOH8 (ENSECAG00000039231) #30	ST3GAL5 (ENSECAG00000011464) #31	POLR1A (ENSECAG00000010092) #33	PTCD3 (ENSECAG00000020623) #34	ENSECAG00000048487	IMMT (ENSECAG00000024569) #35	MRPL35 (ENSECAG00000048642) #36	REEP1 (ENSECAG00000024247) #37	KDM3A (ENSECAG00000007369)
Donkey	MODERN SPECIES	26	ENSEASG00005001226 #7	SUCLG1 (ENSEASG00005001258) #9	DNAH6 (ENSEASG00005001279) #10	TRABD2A (ENSEASG00005001397)	ENSEASG00005032677 #11	ENSEASG00005001404 #12	ENSEASG00005030964 #12	TCF7L1 (ENSEASG00005001412) #14	ENSEASG00005001427 #15	RETSAT (ENSEASG00005027102) #16	ENSEASG00005001441 #17	CAPG (ENSEASG00005001445) #18	SH2D6 (ENSEASG00005001453) #19	MAT2A (ENSEASG00005001463) #20	GGCX (ENSEASG00005001468) #21	VAMP8 (ENSEASG00005023642) #22	VAMP5 (ENSEASG00005001487) #23	RNF181 (ENSEASG00005029086) #24	TMEM150A (ENSEASG00005001495) #25	ENSEASG00005033768 #26	USP39 (ENSEASG00005001505) #27	SFTPB (ENSEASG00005001518) #28	ENSEASG00005001603 #29	ATOH8 (ENSEASG00005001607) #30	ST3GAL5 (ENSEASG00005001613) #31	POLR1A (ENSEASG00005001625) #33	PTCD3 (ENSEASG00005001638) #34	IMMT (ENSEASG00005001647) #35	MRPL35 (ENSEASG00005001655) #36	REEP1 (ENSEASG00005001661) #37	KDM3A (ENSEASG00005001676)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160325.b #22
Common shrew	MODERN SPECIES	1408																VAMP8 (ENSSARG00000001240) #22