Caniformia	ANCESTRAL SPECIES	7	ENSGT00530000063424.b	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT01030000235152 #17	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00940000165128	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00390000016547	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31	ENSGT00940000156320 #33	ENSGT01000000214434.B.b.e.b #36	ENSGT00940000163834	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000162130
Canidae	ANCESTRAL SPECIES	40	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00390000016547	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31	ENSGT00940000156320 #33	ENSGT00500000044831.a.a.b.l #35	ENSGT01000000214434.B.b.e.b #36	ENSGT00940000163834	ENSGT00940000155291	ENSGT00940000157548	ENSGT00950000186138	ENSGT00940000159174
Canis_lupus	ANCESTRAL SPECIES	30	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000156240.f #11	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000160325.b.d #14	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00390000016988.a.a.a.a.a.a.b.b #24	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00390000016547	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31	ENSGT00940000156320 #33	ENSGT00500000044831.a.a.b.l #35	ENSGT01000000214434.B.b.e.b #36	ENSGT00940000163834	ENSGT00940000155291	ENSGT00940000157548	ENSGT00950000186138
Dingo	MODERN SPECIES	342	MRPS18C (ENSCAFG00020010491) #7	HELQ (ENSCAFG00020010495) #8	HPSE (ENSCAFG00020010498) #9	COQ2 (ENSCAFG00020010543) #10	ENSCAFG00020010561 #11	ENSCAFG00020010564 #12	PLAC8 (ENSCAFG00020010575) #13	ENSCAFG00020010578 #14	COPS4 (ENSCAFG00020010592) #15	LIN54 (ENSCAFG00020010600) #16	ENSCAFG00020010647 #17	SEC31A (ENSCAFG00020010660) #18	SCD5 (ENSCAFG00020010695) #19	TMEM150C (ENSCAFG00020010697) #20	ENOPH1 (ENSCAFG00020010698) #21	HNRNPDL (ENSCAFG00020010699) #22	HNRNPD (ENSCAFG00020010713) #23	ENSCAFG00020010723 #24	ENSCAFG00020010724 #25	RASGEF1B (ENSCAFG00020010726) #26	PRKG2 (ENSCAFG00020010735) #27	BMP3 (ENSCAFG00020010793) #28	ENSCAFG00020010807 #29	FGF5 (ENSCAFG00020010809) #30	PRDM8 (ENSCAFG00020010813) #31	ENSCAFG00020010823 #32	ANTXR2 (ENSCAFG00020010842) #33	ENSCAFG00020010865 #34	ENSCAFG00020010886 #35	GK2 (ENSCAFG00020010894) #36	ENSCAFG00020010916 #37
Dog	MODERN SPECIES	25	ENSCAFG00845021572 #8	ENSCAFG00845021505 #8	HPSE (ENSCAFG00845021381) #9	COQ2 (ENSCAFG00845021322) #10	ENSCAFG00845021294 #11	ENSCAFG00845021212 #12	PLAC8B (ENSCAFG00845021150) #13	ENSCAFG00845021087 #14	LIN54 (ENSCAFG00845020955) #16	THAP9 (ENSCAFG00845020757)	SEC31A (ENSCAFG00845019603) #18	SCD5 (ENSCAFG00845019428) #19	ENSCAFG00845019398	TMEM150C (ENSCAFG00845019337) #20	ENOPH1 (ENSCAFG00845019277) #21	HNRNPDL (ENSCAFG00845018924) #22	HNRNPD (ENSCAFG00845018743) #23	ENSCAFG00845018639 #24	RASGEF1B (ENSCAFG00845018382) #26	PRKG2 (ENSCAFG00845018088) #27	BMP3 (ENSCAFG00845017996) #28	CFAP299 (ENSCAFG00845017920)	FGF5 (ENSCAFG00845017837) #30	PRDM8 (ENSCAFG00845017674) #31	ENSCAFG00845017632 #32	ANTXR2 (ENSCAFG00845017156) #33	ENSCAFG00845016799 #35	GK2 (ENSCAFG00845016772) #36	NAA11 (ENSCAFG00845016750)	PAQR3 (ENSCAFG00845016686)	BMP2K (ENSCAFG00845016378)
Red fox	DUPLICATION
Red fox	MODERN SPECIES	27	MRPS18C (ENSVVUG00000015672) #7	HELQ (ENSVVUG00000015676) #8	HPSE (ENSVVUG00000015683) #9	ENSVVUG00000015815 #10	ENSVVUG00000015827 #12	PLAC8 (ENSVVUG00000015842) #13	COPS4 (ENSVVUG00000015852) #15	LIN54 (ENSVVUG00000015863) #16	ENSVVUG00000015906 #17	SEC31A (ENSVVUG00000016218) #18	ENSVVUG00000024645	SCD5 (ENSVVUG00000024647) #19	ENSVVUG00000024648	TMEM150C (ENSVVUG00000024651) #20	ENOPH1 (ENSVVUG00000024652) #21	HNRNPDL (ENSVVUG00000024653) #22	ENSVVUG00000024657	HNRNPD (ENSVVUG00000024658) #23	ENSVVUG00000024667 ##24	RASGEF1B (ENSVVUG00000024668) #26	PRKG2 (ENSVVUG00000024673) #27	BMP3 (ENSVVUG00000024734) #28	ENSVVUG00000024743 #29	FGF5 (ENSVVUG00000024746) #30	ENSVVUG00000024749 #31	ANTXR2 (ENSVVUG00000024752) #33	GK2 (ENSVVUG00000024765) #36	ENSVVUG00000024769 #37	ENSVVUG00000024772	PAQR3 (ENSVVUG00000024780)	BMP2K (ENSVVUG00000024784)
Red fox	MODERN SPECIES	47												ENSVVUG00000013666	NALCN (ENSVVUG00000013625)	ENSVVUG00000013614	TMTC4 (ENSVVUG00000013599)	ENSVVUG00000013596 #22	GGACT (ENSVVUG00000013592)	PCCA (ENSVVUG00000013550)	ZIC2 (ENSVVUG00000013544)	ZIC5 (ENSVVUG00000013540)	ENSVVUG00000013536	CLYBL (ENSVVUG00000013523)	TM9SF2 (ENSVVUG00000013510)	GPR183 (ENSVVUG00000013504)	GPR18 (ENSVVUG00000013500)	UBAC2 (ENSVVUG00000013488)	DOCK9 (ENSVVUG00000011853)	SLC15A1 (ENSVVUG00000007172)	STK24 (ENSVVUG00000007004)	FARP1 (ENSVVUG00000006964)	IPO5 (ENSVVUG00000006923)
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00530000063424.b	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT01030000235152 #17	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00940000165128	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00390000016547	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31	ENSGT00940000156320 #33	ENSGT01000000214434.B.b.e.b #36	ENSGT00940000163834	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000162130
Ursidae	ANCESTRAL SPECIES	17	ENSGT00530000063424.b	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT01030000235152 #17	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00940000165128	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00940000166264 #29	ENSGT00390000016547	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31	ENSGT00940000156320 #33	ENSGT01000000214434.B.b.e.b #36	ENSGT00940000163834	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	2	GPAT3 (ENSAMEG00000004856)	ABRAXAS1 (ENSAMEG00000023567)	MRPS18C (ENSAMEG00000026135) #7	HELQ (ENSAMEG00000004921) #8	HPSE (ENSAMEG00000004938) #9	COQ2 (ENSAMEG00000005006) #10	ENSAMEG00000005018 #12	PLAC8 (ENSAMEG00000005020) #13	COPS4 (ENSAMEG00000005021) #15	LIN54 (ENSAMEG00000005042) #16	THAP9 (ENSAMEG00000005064)	SEC31A (ENSAMEG00000005066) #18	SCD5 (ENSAMEG00000005113) #19	TMEM150C (ENSAMEG00000005124) #20	ENOPH1 (ENSAMEG00000005140) #21	ENSAMEG00000024825 #22	ENSAMEG00000005145 #22	HNRNPD (ENSAMEG00000005158) #23	ENSAMEG00000031158	RASGEF1B (ENSAMEG00000005176) #26	PRKG2 (ENSAMEG00000005199) #27	BMP3 (ENSAMEG00000005230) #28	ENSAMEG00000026264	CFAP299 (ENSAMEG00000005237)	FGF5 (ENSAMEG00000005239) #30	PRDM8 (ENSAMEG00000024487) #31	ENSAMEG00000019664	ANTXR2 (ENSAMEG00000005247) #33	ENSAMEG00000027026 #35	GK2 (ENSAMEG00000019462) #36	ENSAMEG00000024337 #37
Giant Panda	MODERN SPECIES	2	ABRAXAS1 (ENSAMEG00000023567)	MRPS18C (ENSAMEG00000026135) #7	HELQ (ENSAMEG00000004921) #8	HPSE (ENSAMEG00000004938) #9	COQ2 (ENSAMEG00000005006) #10	ENSAMEG00000005018 #12	PLAC8 (ENSAMEG00000005020) #13	COPS4 (ENSAMEG00000005021) #15	LIN54 (ENSAMEG00000005042) #16	THAP9 (ENSAMEG00000005064)	SEC31A (ENSAMEG00000005066) #18	SCD5 (ENSAMEG00000005113) #19	TMEM150C (ENSAMEG00000005124) #20	ENOPH1 (ENSAMEG00000005140) #21	ENSAMEG00000024825 #22	ENSAMEG00000005145 #22	HNRNPD (ENSAMEG00000005158) #23	ENSAMEG00000031158	RASGEF1B (ENSAMEG00000005176) #26	PRKG2 (ENSAMEG00000005199) #27	BMP3 (ENSAMEG00000005230) #28	ENSAMEG00000026264	CFAP299 (ENSAMEG00000005237)	FGF5 (ENSAMEG00000005239) #30	PRDM8 (ENSAMEG00000024487) #31	ENSAMEG00000019664	ANTXR2 (ENSAMEG00000005247) #33	ENSAMEG00000027026 #35	GK2 (ENSAMEG00000019462) #36	ENSAMEG00000024337 #37	PAQR3 (ENSAMEG00000005319)
Ursus	ANCESTRAL SPECIES	146	ENSGT00530000063424.b	ENSGT00390000003791 #7	ENSGT00940000157350 #8	ENSGT00390000004874.a.b #9	ENSGT00940000153771.B #10	ENSGT00940000165276 #12	ENSGT00940000157329 #13	ENSGT00940000153510.b #15	ENSGT00940000155881 #16	ENSGT00940000161474.b	ENSGT01030000235152 #17	ENSGT00390000003175.a.b #18	ENSGT00940000162090 #19	ENSGT01030000234578.A.a #20	ENSGT00440000039914 #21	ENSGT00940000154426.b.b.x.a #22	ENSGT00940000158010 #23	ENSGT00950000185288	ENSGT00940000155816.b #26	ENSGT00940000159393 #27	ENSGT00940000159775 #28	ENSGT00940000166264 #29	ENSGT00940000158449 #30	ENSGT00890000139463.b.b.b #31
Polar bear	MODERN SPECIES	183	ABRAXAS1 (ENSUMAG00000008837)	MRPS18C (ENSUMAG00000008829) #7	HELQ (ENSUMAG00000008823) #8	HPSE (ENSUMAG00000008772) #9	COQ2 (ENSUMAG00000008767) #10	ENSUMAG00000008764 #12	PLAC8 (ENSUMAG00000008762) #13	COPS4 (ENSUMAG00000008755) #15	LIN54 (ENSUMAG00000008750) #16	THAP9 (ENSUMAG00000008748)	SEC31A (ENSUMAG00000008704) #18	SCD5 (ENSUMAG00000008694) #19	TMEM150C (ENSUMAG00000008691) #20	ENOPH1 (ENSUMAG00000008688) #21	HNRNPD (ENSUMAG00000008685) #23	ENSUMAG00000008681 #22	ENSUMAG00000008674	RASGEF1B (ENSUMAG00000008667) #26	PRKG2 (ENSUMAG00000008585) #27	BMP3 (ENSUMAG00000008570) #28	ENSUMAG00000008564 #29	FGF5 (ENSUMAG00000008558) #30	ANTXR2 (ENSUMAG00000008239) #33	ENSUMAG00000008169 #35	GK2 (ENSUMAG00000008167) #36	ENSUMAG00000008159 #37	PAQR3 (ENSUMAG00000008113)	BMP2K (ENSUMAG00000008088)	ANXA3 (ENSUMAG00000008071)	FRAS1 (ENSUMAG00000008017)	MRPL1 (ENSUMAG00000007973)
American black bear	MODERN SPECIES	273														TMEM150C (ENSUAMG00000011351) #20	ENOPH1 (ENSUAMG00000011353) #21	ENSUAMG00000011358 #22	HNRNPD (ENSUAMG00000011374) #23