Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Glires ANCESTRAL SPECIES 4 ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Rodentia ANCESTRAL SPECIES 5 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Rodentia_A ANCESTRAL SPECIES 4 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Sciuridae ANCESTRAL SPECIES 14 ENSGT01070000253775.a.d.b.j #9 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00390000011466 Eurasian red squirrel MODERN SPECIES 14 B4GALNT1 (ENSSVLG00005014897) #7 ENSSVLG00005014760 #8 ENSSVLG00005014611 #9 ARHGEF25 (ENSSVLG00005014310) #10 DTX3 (ENSSVLG00005014198) #11 PIP4K2C (ENSSVLG00005014089) #12 KIF5A (ENSSVLG00005013715) #13 DCTN2 (ENSSVLG00005013297) #14 MBD6 (ENSSVLG00005013192) #15 DDIT3 (ENSSVLG00005013130) #16 MARS1 (ENSSVLG00005012921) #17 ARHGAP9 (ENSSVLG00005011907) #18 GLI1 (ENSSVLG00005011547) #19 INHBE (ENSSVLG00005011485) #20 INHBC (ENSSVLG00005011429) #21 R3HDM2 (ENSSVLG00005011028) #22 STAC3 (ENSSVLG00005010688) #23 NDUFA4L2 (ENSSVLG00005010637) #24 SHMT2 (ENSSVLG00005010562) #25 NXPH4 (ENSSVLG00005010530) #26 LRP1 (ENSSVLG00005009995) #27 STAT6 (ENSSVLG00005009880) #28 NAB2 (ENSSVLG00005009807) #29 NEMP1 (ENSSVLG00005009668) #30 MYO1A (ENSSVLG00005009487) #31 TAC3 (ENSSVLG00005009429) #32 ZBTB39 (ENSSVLG00005009416) #33 GPR182 (ENSSVLG00005009407) #34 RDH16 (ENSSVLG00005009375) #35 ENSSVLG00005009344 #36 ENSSVLG00005009281 #37 Marmotini ANCESTRAL SPECIES 4 ENSGT01070000253775.a.d.b.i #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305.e #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00390000011466 Marmotini_b ANCESTRAL SPECIES 3 ENSGT01070000253775.a.d.b.i #8 ENSGT01070000253775.a.d.b.j #9 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00860000136110 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305.e #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00390000011466 ENSGT00440000033468.c.a Squirrel DUPLICATION Squirrel MODERN SPECIES 246 ENSSTOG00000014458 B4GALNT1 (ENSSTOG00000001087) #7 ENSSTOG00000020554 #9 ARHGEF25 (ENSSTOG00000001189) #10 DTX3 (ENSSTOG00000026285) #11 PIP4K2C (ENSSTOG00000001081) #12 KIF5A (ENSSTOG00000001164) #13 DCTN2 (ENSSTOG00000001156) #14 ENSSTOG00000001143 #15 ENSSTOG00000019858 #16 MARS1 (ENSSTOG00000001128) #17 ARHGAP9 (ENSSTOG00000001107) #18 GLI1 (ENSSTOG00000020366) #19 INHBE (ENSSTOG00000025066) #20 INHBC (ENSSTOG00000001097) #21 ENSSTOG00000013424 #22 STAC3 (ENSSTOG00000013409) #23 SHMT2 (ENSSTOG00000013388) #25 NXPH4 (ENSSTOG00000024980) #26 LRP1 (ENSSTOG00000013305) #27 STAT6 (ENSSTOG00000013280) #28 NAB2 (ENSSTOG00000020459) #29 NEMP1 (ENSSTOG00000012331) #30 MYO1A (ENSSTOG00000012304) #31 TAC3 (ENSSTOG00000012292) #32 ZBTB39 (ENSSTOG00000012284) #33 GPR182 (ENSSTOG00000020264) #34 RDH16 (ENSSTOG00000021331) #35 SDR9C7 (ENSSTOG00000026458) #36 PRIM1 (ENSSTOG00000009049) ENSSTOG00000009028 Squirrel MODERN SPECIES 327 ENSSTOG00000024250 HLA-DQB2 (ENSSTOG00000020276) ENSSTOG00000009632 ENSSTOG00000019974 ENSSTOG00000034168 HLA-DRA (ENSSTOG00000010426) BTNL2 (ENSSTOG00000010424) ENSSTOG00000023144 ENSSTOG00000030178 #22 ENSSTOG00000029574 ENSSTOG00000028306 GPSM3 (ENSSTOG00000029053) PBX2 (ENSSTOG00000014748) AGER (ENSSTOG00000014729) RNF5 (ENSSTOG00000024478) AGPAT1 (ENSSTOG00000008401) EGFL8 (ENSSTOG00000029022) PPT2 (ENSSTOG00000014721) PRRT1 (ENSSTOG00000026158) FKBPL (ENSSTOG00000014716) ATF6B (ENSSTOG00000027684) TNXB (ENSSTOG00000024569) CYP21A2 (ENSSTOG00000014662) ENSSTOG00000014639 Arctic ground squirrel MODERN SPECIES 197 B4GALNT1 (ENSUPAG00010017501) #7 ENSUPAG00010017441 #8 ARHGEF25 (ENSUPAG00010017411) #10 DTX3 (ENSUPAG00010017398) #11 PIP4K2C (ENSUPAG00010017376) #12 ENSUPAG00010017369 KIF5A (ENSUPAG00010017316) #13 DCTN2 (ENSUPAG00010017296) #14 MBD6 (ENSUPAG00010017279) #15 ENSUPAG00010017275 #16 MARS1 (ENSUPAG00010017243) #17 GLI1 (ENSUPAG00010017222) #19 ARHGAP9 (ENSUPAG00010017207) #18 INHBE (ENSUPAG00010017202) #20 INHBC (ENSUPAG00010017199) #21 R3HDM2 (ENSUPAG00010016815) #22 STAC3 (ENSUPAG00010016748) #23 SHMT2 (ENSUPAG00010016720) #25 NXPH4 (ENSUPAG00010016712) #26 LRP1 (ENSUPAG00010016565) #27 STAT6 (ENSUPAG00010016543) #28 NAB2 (ENSUPAG00010016528) #29 NEMP1 (ENSUPAG00010016506) #30 MYO1A (ENSUPAG00010016464) #31 TAC3 (ENSUPAG00010016446) #32 ZBTB39 (ENSUPAG00010016442) #33 GPR182 (ENSUPAG00010016435) #34 RDH16 (ENSUPAG00010016427) #35 SDR9C7 (ENSUPAG00010016416) #36 PRIM1 (ENSUPAG00010016373) ENSUPAG00010016347 Alpin marmot MODERN SPECIES 11 ENSMMMG00000010726 #8 ARHGEF25 (ENSMMMG00000010788) #10 DTX3 (ENSMMMG00000010875) #11 PIP4K2C (ENSMMMG00000010891) #12 KIF5A (ENSMMMG00000010904) #13 ENSMMMG00000011019 DCTN2 (ENSMMMG00000011027) #14 MBD6 (ENSMMMG00000011054) #15 ENSMMMG00000011091 ENSMMMG00000011094 #16 MARS1 (ENSMMMG00000011099) #17 ARHGAP9 (ENSMMMG00000011136) #18 GLI1 (ENSMMMG00000011156) #19 INHBE (ENSMMMG00000011176) #20 INHBC (ENSMMMG00000011180) #21 R3HDM2 (ENSMMMG00000011206) #22 STAC3 (ENSMMMG00000012741) #23 NDUFA4L2 (ENSMMMG00000012770) #24 ENSMMMG00000012783 SHMT2 (ENSMMMG00000012788) #25 NXPH4 (ENSMMMG00000012812) #26 LRP1 (ENSMMMG00000012817) #27 STAT6 (ENSMMMG00000012942) #28 NAB2 (ENSMMMG00000012959) #29 NEMP1 (ENSMMMG00000012998) #30 MYO1A (ENSMMMG00000013029) #31 TAC3 (ENSMMMG00000013065) #32 ZBTB39 (ENSMMMG00000013072) #33 GPR182 (ENSMMMG00000013074) #34 RDH16 (ENSMMMG00000013078) #35 SDR9C7 (ENSMMMG00000013089) #36 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Guinea pig MODERN SPECIES 9 AGAP2 (ENSCPOG00000022267) OS9 (ENSCPOG00000002667) B4GALNT1 (ENSCPOG00000003202) #7 ENSCPOG00000033620 #8 ARHGEF25 (ENSCPOG00000020097) #10 PIP4K2C (ENSCPOG00000022071) #12 KIF5A (ENSCPOG00000012882) #13 DCTN2 (ENSCPOG00000012879) #14 MBD6 (ENSCPOG00000012873) #15 DDIT3 (ENSCPOG00000012871) #16 MARS1 (ENSCPOG00000012866) #17 ARHGAP9 (ENSCPOG00000014343) #18 GLI1 (ENSCPOG00000005414) #19 INHBE (ENSCPOG00000031115) #20 INHBC (ENSCPOG00000033593) #21 R3HDM2 (ENSCPOG00000009217) #22 STAC3 (ENSCPOG00000006200) #23 NDUFA4L2 (ENSCPOG00000035802) #24 SHMT2 (ENSCPOG00000012840) #25 LRP1 (ENSCPOG00000031730) #27 STAT6 (ENSCPOG00000012941) #28 NAB2 (ENSCPOG00000012940) #29 NEMP1 (ENSCPOG00000034078) #30 MYO1A (ENSCPOG00000012927) #31 TAC3 (ENSCPOG00000012924) #32 ZBTB39 (ENSCPOG00000035858) #33 GPR182 (ENSCPOG00000022599) #34 RDH16 (ENSCPOG00000002833) #35 SDR9C7 (ENSCPOG00000040671) #36 ENSCPOG00000002890 ENSCPOG00000006822 Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Degu DUPLICATION Degu MODERN SPECIES 327 ARHGEF25 (ENSODEG00000002032) #10 DTX3 (ENSODEG00000001975) #11 PIP4K2C (ENSODEG00000001958) #12 KIF5A (ENSODEG00000001884) #13 DCTN2 (ENSODEG00000001844) #14 ENSODEG00000001830 #15 ENSODEG00000001814 #15 DDIT3 (ENSODEG00000001801) #16 MARS1 (ENSODEG00000001752) #17 ARHGAP9 (ENSODEG00000001619) #18 GLI1 (ENSODEG00000001558) #19 INHBE (ENSODEG00000001543) #20 INHBC (ENSODEG00000001532) #21 ENSODEG00000001520 #22 ENSODEG00000001512 ENSODEG00000001494 #22 ENSODEG00000001478 STAC3 (ENSODEG00000001424) #23 NDUFA4L2 (ENSODEG00000002560) #24 ENSODEG00000002538 #25 NXPH4 (ENSODEG00000002515) #26 LRP1 (ENSODEG00000002173) #27 STAT6 (ENSODEG00000001929) #28 NAB2 (ENSODEG00000001905) #29 NEMP1 (ENSODEG00000001860) #30 ENSODEG00000018785 MYO1A (ENSODEG00000001774) #31 TAC3 (ENSODEG00000001740) #32 GPR182 (ENSODEG00000001727) #34 ENSODEG00000001707 #35 ENSODEG00000001681 Degu MODERN SPECIES 327 B4GALNT1 (ENSODEG00000002156) #7 ENSODEG00000002108 #8 ARHGEF25 (ENSODEG00000002032) #10 DTX3 (ENSODEG00000001975) #11 PIP4K2C (ENSODEG00000001958) #12 KIF5A (ENSODEG00000001884) #13 DCTN2 (ENSODEG00000001844) #14 ENSODEG00000001830 #15 ENSODEG00000001814 #15 DDIT3 (ENSODEG00000001801) #16 MARS1 (ENSODEG00000001752) #17 ARHGAP9 (ENSODEG00000001619) #18 GLI1 (ENSODEG00000001558) #19 INHBE (ENSODEG00000001543) #20 INHBC (ENSODEG00000001532) #21 ENSODEG00000001520 #22 ENSODEG00000001512 ENSODEG00000001494 #22 ENSODEG00000001478 STAC3 (ENSODEG00000001424) #23 NDUFA4L2 (ENSODEG00000002560) #24 ENSODEG00000002538 #25 NXPH4 (ENSODEG00000002515) #26 LRP1 (ENSODEG00000002173) #27 STAT6 (ENSODEG00000001929) #28 NAB2 (ENSODEG00000001905) #29 NEMP1 (ENSODEG00000001860) #30 ENSODEG00000018785 MYO1A (ENSODEG00000001774) #31 TAC3 (ENSODEG00000001740) #32 GPR182 (ENSODEG00000001727) #34 Long-tailed chinchilla MODERN SPECIES 165 OS9 (ENSCLAG00000010151) B4GALNT1 (ENSCLAG00000009160) #7 ENSCLAG00000011703 #8 ARHGEF25 (ENSCLAG00000010120) #10 DTX3 (ENSCLAG00000008560) #11 PIP4K2C (ENSCLAG00000012549) #12 KIF5A (ENSCLAG00000011917) #13 DCTN2 (ENSCLAG00000010761) #14 MBD6 (ENSCLAG00000010083) #15 DDIT3 (ENSCLAG00000009376) #16 MARS1 (ENSCLAG00000012164) #17 ARHGAP9 (ENSCLAG00000015213) #18 GLI1 (ENSCLAG00000010833) #19 INHBE (ENSCLAG00000013199) #20 INHBC (ENSCLAG00000015051) #21 R3HDM2 (ENSCLAG00000011997) #22 STAC3 (ENSCLAG00000017371) #23 NDUFA4L2 (ENSCLAG00000017351) #24 SHMT2 (ENSCLAG00000014378) #25 NXPH4 (ENSCLAG00000016280) #26 LRP1 (ENSCLAG00000011741) #27 STAT6 (ENSCLAG00000011587) #28 NAB2 (ENSCLAG00000009310) #29 NEMP1 (ENSCLAG00000011169) #30 MYO1A (ENSCLAG00000009254) #31 TAC3 (ENSCLAG00000014146) #32 ZBTB39 (ENSCLAG00000012800) #33 GPR182 (ENSCLAG00000012163) #34 ENSCLAG00000009985 #35 ENSCLAG00000012992 ENSCLAG00000011030 #35 Rodentia_B ANCESTRAL SPECIES 3 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Myomorpha ANCESTRAL SPECIES 2 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Muroidea ANCESTRAL SPECIES 5 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Muroidea_A ANCESTRAL SPECIES 22 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 Cricetidae ANCESTRAL SPECIES 21 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Cricetinae ANCESTRAL SPECIES 22 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b.q #35 ENSGT00940000154118.b.r #35 ENSGT00940000161764 #36 Chinese hamster chok1gshd MODERN SPECIES 352 Os9 (ENSCGRG00001020659) B4galnt1 (ENSCGRG00001003379) #7 Slc26a10 (ENSCGRG00001023769) #8 Arhgef25 (ENSCGRG00001022612) #10 Dtx3 (ENSCGRG00001000914) #11 Pip4k2c (ENSCGRG00001011872) #12 Kif5a (ENSCGRG00001017636) #13 Dctn2 (ENSCGRG00001015007) #14 Mbd6 (ENSCGRG00001017943) #15 Ddit3 (ENSCGRG00001015590) #16 Mars1 (ENSCGRG00001019238) #17 Arhgap9 (ENSCGRG00001021134) #18 Gli1 (ENSCGRG00001019686) #19 Inhbe (ENSCGRG00001023439) #20 Inhbc (ENSCGRG00001017014) #21 R3hdm2 (ENSCGRG00001017324) #22 Stac3 (ENSCGRG00001021668) #23 Ndufa4l2 (ENSCGRG00001021531) #24 Shmt2 (ENSCGRG00001018472) #25 Nxph4 (ENSCGRG00001014648) #26 Lrp1 (ENSCGRG00001011627) #27 ENSCGRG00001002945 Stat6 (ENSCGRG00001020526) #28 Nab2 (ENSCGRG00001018114) #29 Nemp1 (ENSCGRG00001014268) #30 Myo1a (ENSCGRG00001005373) #31 Tac2 (ENSCGRG00001014061) #32 Zbtb39 (ENSCGRG00001001407) #33 Gpr182 (ENSCGRG00001011877) #34 ENSCGRG00001016912 #35 ENSCGRG00001003209 #35 Cricetidae_B ANCESTRAL SPECIES 35 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT01090000261933 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00940000162028 Northern American deer mouse MODERN SPECIES 9 ENSPEMG00000013550 #8 Arhgef25 (ENSPEMG00000011625) #10 Dtx3 (ENSPEMG00000010078) #11 Pip4k2c (ENSPEMG00000009463) #12 Kif5a (ENSPEMG00000007193) #13 ENSPEMG00000024880 Dctn2 (ENSPEMG00000003096) #14 Mbd6 (ENSPEMG00000000952) #15 Ddit3 (ENSPEMG00000025876) Ddit3 (ENSPEMG00000000565) #16 Mars1 (ENSPEMG00000000046) #17 Arhgap9 (ENSPEMG00000018745) #18 Gli1 (ENSPEMG00000018514) #19 Inhbe (ENSPEMG00000028054) #20 Inhbc (ENSPEMG00000017942) #21 R3hdm2 (ENSPEMG00000015964) #22 Stac3 (ENSPEMG00000016520) #23 Ndufa4l2 (ENSPEMG00000025310) #24 Shmt2 (ENSPEMG00000015669) #25 Nxph4 (ENSPEMG00000014406) #26 Lrp1 (ENSPEMG00000015988) #27 Stat6 (ENSPEMG00000006873) #28 Nab2 (ENSPEMG00000003067) #29 Nemp1 (ENSPEMG00000000349) #30 Myo1a (ENSPEMG00000018549) #31 Tac2 (ENSPEMG00000007115) #32 Zbtb39 (ENSPEMG00000001529) #33 Gpr182 (ENSPEMG00000012025) #34 ENSPEMG00000008778 #35 ENSPEMG00000030154 #35 ENSPEMG00000029591 #35 Prairie vole MODERN SPECIES 10 Os9 (ENSMOCG00000004512) B4galnt1 (ENSMOCG00000020319) #7 Slc26a10 (ENSMOCG00000003649) #8 Arhgef25 (ENSMOCG00000013132) #10 Dtx3 (ENSMOCG00000010598) #11 Pip4k2c (ENSMOCG00000014405) #12 Kif5a (ENSMOCG00000004701) #13 Dctn2 (ENSMOCG00000000594) #14 Mbd6 (ENSMOCG00000012812) #15 Ddit3 (ENSMOCG00000002751) #16 Mars1 (ENSMOCG00000010941) #17 Arhgap9 (ENSMOCG00000002227) #18 Gli1 (ENSMOCG00000015523) #19 Inhbe (ENSMOCG00000021734) #20 Inhbc (ENSMOCG00000001463) #21 R3hdm2 (ENSMOCG00000014425) #22 Stac3 (ENSMOCG00000014255) #23 Ndufa4l2 (ENSMOCG00000005415) #24 Shmt2 (ENSMOCG00000006177) #25 Nxph4 (ENSMOCG00000020468) #26 ENSMOCG00000000670 #27 ENSMOCG00000021063 Stat6 (ENSMOCG00000003830) #28 Nab2 (ENSMOCG00000020714) #29 Nemp1 (ENSMOCG00000011584) #30 Myo1a (ENSMOCG00000011760) #31 Tac2 (ENSMOCG00000000889) #32 Zbtb39 (ENSMOCG00000001699) #33 Gpr182 (ENSMOCG00000017417) #34 ENSMOCG00000020549 #35 ENSMOCG00000011639 #35 Murinae ANCESTRAL SPECIES 22 ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00860000136110 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.a.a.a.a ##35 ENSGT00940000154118.b.w #35 ENSGT00940000161764 #36 Mus ANCESTRAL SPECIES 23 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b.w.b #35 ENSGT00940000154118.b.w.a.a #35 ENSGT00940000154118.b.w.a.b #35 Mus_A ANCESTRAL SPECIES 11 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b.w.b #35 ENSGT00940000154118.b.w.a.a #35 ENSGT00940000154118.b.w.a.b #35 Mus_B ANCESTRAL SPECIES 10 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b.w.b #35 ENSGT00940000154118.b.w.a.a #35 ENSGT00940000154118.b.w.a.b #35 Mouse MODERN SPECIES 1 B4galnt1 (ENSMUSG00000006731) #7 Slc26a10 (ENSMUSG00000040441) #8 Arhgef25 (ENSMUSG00000019467) #10 Dtx3 (ENSMUSG00000040415) #11 Pip4k2c (ENSMUSG00000025417) #12 Kif5a (ENSMUSG00000074657) #13 Dctn2 (ENSMUSG00000025410) #14 Mbd6 (ENSMUSG00000025409) #15 Ddit3 (ENSMUSG00000025408) #16 Ddit3 (ENSMUSG00000116429) Mars1 (ENSMUSG00000040354) #17 Arhgap9 (ENSMUSG00000040345) #18 Gli1 (ENSMUSG00000025407) #19 Inhbe (ENSMUSG00000047492) #20 Inhbc (ENSMUSG00000025405) #21 R3hdm2 (ENSMUSG00000025404) #22 Stac3 (ENSMUSG00000040287) #23 Ndufa4l2 (ENSMUSG00000040280) #24 Shmt2 (ENSMUSG00000025403) #25 Nxph4 (ENSMUSG00000040258) #26 Lrp1 (ENSMUSG00000040249) #27 Stat6 (ENSMUSG00000002147) #28 Nab2 (ENSMUSG00000025402) #29 Nemp1 (ENSMUSG00000040195) #30 Myo1a (ENSMUSG00000025401) #31 Tac2 (ENSMUSG00000025400) #32 Zbtb39 (ENSMUSG00000044617) #33 Gpr182 (ENSMUSG00000058396) #34 Rdh1 (ENSMUSG00000089789) #35 Rdh16f1 (ENSMUSG00000099009) Rdh9 (ENSMUSG00000056148) #35 Mus_C ANCESTRAL SPECIES 7 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00950000182883.b.a.b #26 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000154118.b.w.a.b #35 ENSGT00940000161764 #36 ENSGT00390000011466 spretus MODERN SPECIES 1 Os9 (MGP_SPRETEiJ_G0016707) B4galnt1 (MGP_SPRETEiJ_G0016708) #7 Slc26a10 (MGP_SPRETEiJ_G0016709) #8 Arhgef25 (MGP_SPRETEiJ_G0016710) #10 Dtx3 (MGP_SPRETEiJ_G0016711) #11 Pip4k2c (MGP_SPRETEiJ_G0016712) #12 Kif5a (MGP_SPRETEiJ_G0016713) #13 Dctn2 (MGP_SPRETEiJ_G0016714) #14 Mbd6 (MGP_SPRETEiJ_G0016715) #15 Ddit3 (MGP_SPRETEiJ_G0016716) #16 Mars1 (MGP_SPRETEiJ_G0016717) #17 MGP_SPRETEiJ_G0016718 #18 Gli1 (MGP_SPRETEiJ_G0016719) #19 Inhbe (MGP_SPRETEiJ_G0016720) #20 Inhbc (MGP_SPRETEiJ_G0016721) #21 R3hdm2 (MGP_SPRETEiJ_G0016722) #22 Stac3 (MGP_SPRETEiJ_G0016723) #23 Ndufa4l2 (MGP_SPRETEiJ_G0016724) #24 Shmt2 (MGP_SPRETEiJ_G0016725) #25 Nxph4 (MGP_SPRETEiJ_G0016726) #26 Lrp1 (MGP_SPRETEiJ_G0016727) #27 Stat6 (MGP_SPRETEiJ_G0016728) #28 Nab2 (MGP_SPRETEiJ_G0016729) #29 Myo1a (MGP_SPRETEiJ_G0016731) #31 Tac2 (MGP_SPRETEiJ_G0016732) #32 Zbtb39 (MGP_SPRETEiJ_G0016733) #33 Gpr182 (MGP_SPRETEiJ_G0016734) #34 MGP_SPRETEiJ_G0016735 #35 MGP_SPRETEiJ_G0016737 ##35 MGP_SPRETEiJ_G0016738 #35 Sdr9c7 (MGP_SPRETEiJ_G0016739) #36 Steppe mouse MODERN SPECIES 2596 ENSMSIG00000026302 #17 Arhgap9 (ENSMSIG00000026737) #18 Gli1 (ENSMSIG00000000166) #19 Inhbe (ENSMSIG00000000566) #20 Inhbc (ENSMSIG00000000587) #21 R3hdm2 (ENSMSIG00000000757) #22 Stac3 (ENSMSIG00000002644) #23 Ndufa4l2 (ENSMSIG00000002715) #24 Shmt2 (ENSMSIG00000002744) #25 Nxph4 (ENSMSIG00000002804) #26 Lrp1 (ENSMSIG00000002847) #27 Stat6 (ENSMSIG00000003202) #28 Nab2 (ENSMSIG00000003392) #29 Nemp1 (ENSMSIG00000003480) #30 Myo1a (ENSMSIG00000003896) #31 Tac2 (ENSMSIG00000019140) #32 Zbtb39 (ENSMSIG00000019165) #33 Gpr182 (ENSMSIG00000019172) #34 Rdh16f2 (ENSMSIG00000019184) #35 Ryukyu mouse MODERN SPECIES 1 Os9 (MGP_CAROLIEiJ_G0015881) B4galnt1 (MGP_CAROLIEiJ_G0015882) #7 Slc26a10 (MGP_CAROLIEiJ_G0015883) #8 Arhgef25 (MGP_CAROLIEiJ_G0015884) #10 Dtx3 (MGP_CAROLIEiJ_G0015885) #11 Pip4k2c (MGP_CAROLIEiJ_G0015886) #12 Kif5a (MGP_CAROLIEiJ_G0015887) #13 Dctn2 (MGP_CAROLIEiJ_G0015888) #14 Mbd6 (MGP_CAROLIEiJ_G0015889) #15 Ddit3 (MGP_CAROLIEiJ_G0015890) #16 Mars1 (MGP_CAROLIEiJ_G0015891) #17 MGP_CAROLIEiJ_G0015892 #18 Gli1 (MGP_CAROLIEiJ_G0015893) #19 Inhbe (MGP_CAROLIEiJ_G0015894) #20 Inhbc (MGP_CAROLIEiJ_G0015895) #21 R3hdm2 (MGP_CAROLIEiJ_G0015896) #22 Stac3 (MGP_CAROLIEiJ_G0015897) #23 Ndufa4l2 (MGP_CAROLIEiJ_G0015898) #24 Shmt2 (MGP_CAROLIEiJ_G0015899) #25 Nxph4 (MGP_CAROLIEiJ_G0015900) #26 Lrp1 (MGP_CAROLIEiJ_G0015901) #27 Stat6 (MGP_CAROLIEiJ_G0015902) #28 Nab2 (MGP_CAROLIEiJ_G0015903) #29 Nemp1 (MGP_CAROLIEiJ_G0015904) #30 Myo1a (MGP_CAROLIEiJ_G0015905) #31 Tac2 (MGP_CAROLIEiJ_G0015906) #32 Zbtb39 (MGP_CAROLIEiJ_G0015907) #33 Gpr182 (MGP_CAROLIEiJ_G0015908) #34 Rdh1 (MGP_CAROLIEiJ_G0015909) #35 MGP_CAROLIEiJ_G0015911 ##35 MGP_CAROLIEiJ_G0015912 ##35 Shrew mouse MODERN SPECIES 22 Os9 (MGP_PahariEiJ_G0031204) B4galnt1 (MGP_PahariEiJ_G0031203) #7 Slc26a10 (MGP_PahariEiJ_G0031202) #8 Arhgef25 (MGP_PahariEiJ_G0031201) #10 Dtx3 (MGP_PahariEiJ_G0031200) #11 Pip4k2c (MGP_PahariEiJ_G0031199) #12 Kif5a (MGP_PahariEiJ_G0031198) #13 Dctn2 (MGP_PahariEiJ_G0031197) #14 Mbd6 (MGP_PahariEiJ_G0031196) #15 Ddit3 (MGP_PahariEiJ_G0031195) #16 Mars1 (MGP_PahariEiJ_G0031194) #17 MGP_PahariEiJ_G0031193 #18 Gli1 (MGP_PahariEiJ_G0031192) #19 Inhbe (MGP_PahariEiJ_G0031191) #20 Inhbc (MGP_PahariEiJ_G0031190) #21 R3hdm2 (MGP_PahariEiJ_G0031189) #22 Stac3 (MGP_PahariEiJ_G0031188) #23 Ndufa4l2 (MGP_PahariEiJ_G0031187) #24 Shmt2 (MGP_PahariEiJ_G0031186) #25 Nxph4 (MGP_PahariEiJ_G0031185) #26 Lrp1 (MGP_PahariEiJ_G0031184) #27 Stat6 (MGP_PahariEiJ_G0031183) #28 Nab2 (MGP_PahariEiJ_G0031182) #29 Nemp1 (MGP_PahariEiJ_G0031181) #30 Myo1a (MGP_PahariEiJ_G0031180) #31 Tac2 (MGP_PahariEiJ_G0031179) #32 Zbtb39 (MGP_PahariEiJ_G0031178) #33 Gpr182 (MGP_PahariEiJ_G0031177) #34 MGP_PahariEiJ_G0031176 #35 MGP_PahariEiJ_G0031175 #35 MGP_PahariEiJ_G0031174 #35 Rat MODERN SPECIES 17 B4galnt1 (ENSRNOG00000004839) #7 Slc26a10 (ENSRNOG00000029465) #8 Arhgef25 (ENSRNOG00000005034) #10 Dtx3 (ENSRNOG00000005129) #11 Pip4k2c (ENSRNOG00000005138) #12 Kif5a (ENSRNOG00000005299) #13 ENSRNOG00000069110 Dctn2 (ENSRNOG00000025481) #14 Mbd6 (ENSRNOG00000006209) #15 Ddit3 (ENSRNOG00000006789) #16 Mars1 (ENSRNOG00000025459) #17 Arhgap9 (ENSRNOG00000006946) #18 Gli1 (ENSRNOG00000025120) #19 Inhbe (ENSRNOG00000007601) #20 Inhbc (ENSRNOG00000007700) #21 R3hdm2 (ENSRNOG00000007801) #22 Stac3 (ENSRNOG00000008050) #23 Ndufa4l2 (ENSRNOG00000031851) #24 Shmt2 (ENSRNOG00000008106) #25 Nxph4 (ENSRNOG00000025059) #26 Lrp1 (ENSRNOG00000025053) #27 Stat6 (ENSRNOG00000025023) #28 Nemp1 (ENSRNOG00000046492) #30 Nab2 (ENSRNOG00000008415) #29 Myo1a (ENSRNOG00000004177) #31 Tac3 (ENSRNOG00000004229) #32 Zbtb39 (ENSRNOG00000004306) #33 Gpr182 (ENSRNOG00000004311) #34 Rdh16 (ENSRNOG00000029651) #35 ENSRNOG00000067654 Rdh7 (ENSRNOG00000004391) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1252 Os9 (ENSNGAG00000001426) B4galnt1 (ENSNGAG00000010764) #7 Slc26a10 (ENSNGAG00000007258) #8 Arhgef25 (ENSNGAG00000017593) #10 Dtx3 (ENSNGAG00000005639) #11 Pip4k2c (ENSNGAG00000018449) #12 Kif5a (ENSNGAG00000006172) #13 Dctn2 (ENSNGAG00000020864) #14 Mbd6 (ENSNGAG00000004286) #15 ENSNGAG00000017151 #16 Mars1 (ENSNGAG00000018824) #17 Arhgap9 (ENSNGAG00000006996) #18 Gli1 (ENSNGAG00000013962) #19 Inhbe (ENSNGAG00000006351) #20 Inhbc (ENSNGAG00000009424) #21 R3hdm2 (ENSNGAG00000018800) #22 Stac3 (ENSNGAG00000013604) #23 Ndufa4l2 (ENSNGAG00000015083) #24 Shmt2 (ENSNGAG00000015828) #25 Nxph4 (ENSNGAG00000016424) #26 Lrp1 (ENSNGAG00000010123) #27 Stat6 (ENSNGAG00000005249) #28 Nab2 (ENSNGAG00000011502) #29 Nemp1 (ENSNGAG00000018516) #30 Myo1a (ENSNGAG00000010469) #31 Tac2 (ENSNGAG00000010463) #32 Zbtb39 (ENSNGAG00000011768) #33 Gpr182 (ENSNGAG00000012413) #34 Lesser Egyptian jerboa MODERN SPECIES 42 ENSJJAG00000008739 B4galnt1 (ENSJJAG00000021764) #7 Slc26a10 (ENSJJAG00000000444) #8 Arhgef25 (ENSJJAG00000020641) #10 Dtx3 (ENSJJAG00000015820) #11 ENSJJAG00000016286 #12 Kif5a (ENSJJAG00000018332) #13 Dctn2 (ENSJJAG00000005539) #14 ENSJJAG00000011275 ##15 Ddit3 (ENSJJAG00000011845) #16 Mars1 (ENSJJAG00000018827) #17 ENSJJAG00000010582 #18 Gli1 (ENSJJAG00000005790) #19 Inhbe (ENSJJAG00000005854) #20 Inhbc (ENSJJAG00000024406) #21 R3hdm2 (ENSJJAG00000010001) #22 Stac3 (ENSJJAG00000004686) #23 Ndufa4l2 (ENSJJAG00000022945) #24 Shmt2 (ENSJJAG00000006620) #25 Nxph4 (ENSJJAG00000005486) #26 Lrp1 (ENSJJAG00000024081) #27 Stat6 (ENSJJAG00000024129) #28 Nab2 (ENSJJAG00000016380) #29 Nemp1 (ENSJJAG00000020038) #30 Myo1a (ENSJJAG00000012576) #31 Tac2 (ENSJJAG00000015356) #32 Sdr9c7 (ENSJJAG00000013857) #36 Prim1 (ENSJJAG00000016717) ENSJJAG00000021261 ENSJJAG00000021434 Baz2a (ENSJJAG00000009782) Kangaroo rat MODERN SPECIES 322 Os9 (ENSDORG00000007263) B4galnt1 (ENSDORG00000004816) #7 Slc26a10 (ENSDORG00000027396) #8 Arhgef25 (ENSDORG00000014405) #10 Dtx3 (ENSDORG00000000412) #11 Pip4k2c (ENSDORG00000026517) #12 Kif5a (ENSDORG00000007141) #13 Dctn2 (ENSDORG00000007137) #14 Mbd6 (ENSDORG00000007136) #15 Ddit3 (ENSDORG00000007132) #16 Mars1 (ENSDORG00000007127) #17 Arhgap9 (ENSDORG00000007126) #18 Gli1 (ENSDORG00000007124) #19 Inhbe (ENSDORG00000007123) #20 Inhbc (ENSDORG00000000632) #21 R3hdm2 (ENSDORG00000011462) #22 Stac3 (ENSDORG00000011461) #23 Ndufa4l2 (ENSDORG00000024207) #24 Shmt2 (ENSDORG00000011460) #25 Nxph4 (ENSDORG00000012565) #26 Lrp1 (ENSDORG00000012553) #27 Stat6 (ENSDORG00000012548) #28 Nab2 (ENSDORG00000029120) #29 Nemp1 (ENSDORG00000013953) #30 Myo1a (ENSDORG00000001275) #31 Tac2 (ENSDORG00000001270) #32 ENSDORG00000003680 Sdr9c7 (ENSDORG00000003679) #36 ENSDORG00000008049 ENSDORG00000014523 ENSDORG00000014522 Lagomorpha ANCESTRAL SPECIES 87 ENSGT00530000063603.A ENSGT00390000006679.a #7 ENSGT01070000253775.a.d.b #8 ENSGT00940000160422 #10 ENSGT00940000161404 #11 ENSGT00940000156890.a.a #12 ENSGT00940000159439 #13 ENSGT00390000003427 #14 ENSGT00530000064137.a.a #15 ENSGT00390000006305 #16 ENSGT00550000075017 #17 ENSGT00950000182860.a.b.a #18 ENSGT00940000160235 #19 ENSGT00940000162107 #20 ENSGT00940000160065 #21 ENSGT00940000155609 #22 ENSGT00950000183092.a #23 ENSGT00940000161040 #24 ENSGT00390000002762.a.a #25 ENSGT00940000157899.b #27 ENSGT01080000257420.C.b.a #28 ENSGT00390000006330.a.b #29 ENSGT00390000002174.a #30 ENSGT00940000160660 #31 ENSGT00390000000335 #32 ENSGT00940000160722 #33 ENSGT00940000154307.D #34 ENSGT00940000162028 ENSGT00940000154118.b #35 ENSGT00940000161764 #36 ENSGT00390000011466 Rabbit MODERN SPECIES 447 OS9 (ENSOCUG00000024515) B4GALNT1 (ENSOCUG00000014121) #7 ENSOCUG00000014113 #8 DTX3 (ENSOCUG00000000915) #11 PIP4K2C (ENSOCUG00000000916) #12 ENSOCUG00000031292 KIF5A (ENSOCUG00000011273) #13 DCTN2 (ENSOCUG00000011262) #14 MBD6 (ENSOCUG00000011255) #15 DDIT3 (ENSOCUG00000023877) #16 MARS1 (ENSOCUG00000007373) #17 ARHGAP9 (ENSOCUG00000022807) #18 GLI1 (ENSOCUG00000011128) #19 INHBE (ENSOCUG00000007382) #20 INHBC (ENSOCUG00000007380) #21 R3HDM2 (ENSOCUG00000013258) #22 STAC3 (ENSOCUG00000013251) #23 NDUFA4L2 (ENSOCUG00000023263) #24 SHMT2 (ENSOCUG00000013242) #25 ENSOCUG00000037050 STAT6 (ENSOCUG00000007929) #28 NAB2 (ENSOCUG00000024399) #29 NEMP1 (ENSOCUG00000013180) #30 MYO1A (ENSOCUG00000001335) #31 ENSOCUG00000032767 #32 ZBTB39 (ENSOCUG00000002811) #33 GPR182 (ENSOCUG00000002813) #34 ENSOCUG00000032670 #35 ENSOCUG00000011778 #35 ENSOCUG00000033629 ENSOCUG00000002732 #35 Pika MODERN SPECIES 3079 R3HDM2 (ENSOPRG00000013670) #22 NDUFA4L2 (ENSOPRG00000013661) #24 SHMT2 (ENSOPRG00000013637) #25 LRP1 (ENSOPRG00000013447) #27 STAT6 (ENSOPRG00000013409) #28 NAB2 (ENSOPRG00000013398) #29 NEMP1 (ENSOPRG00000013379) #30 ENSOPRG00000013323 #31 ENSOPRG00000013302 #32 ZBTB39 (ENSOPRG00000013298) #33 GPR182 (ENSOPRG00000013260) #34 Tree shrew MODERN SPECIES 5722 R3HDM2 (ENSTBEG00000015967) #22 STAC3 (ENSTBEG00000015848) #23 NDUFA4L2 (ENSTBEG00000015731) #24 SHMT2 (ENSTBEG00000015479) #25 LRP1 (ENSTBEG00000014004) #27 ENSTBEG00000013998 STAT6 (ENSTBEG00000013664) #28 NEMP1 (ENSTBEG00000013532) #30 ENSTBEG00000013287 #31 TAC3 (ENSTBEG00000013265) #32 ZBTB39 (ENSTBEG00000013206) #33 GPR182 (ENSTBEG00000012793) #34