Vertebrata ANCESTRAL SPECIES ENSGT00950000182863.A.a.b #22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000182863.A.a.b #22 Euteleostomi ANCESTRAL SPECIES 234 ENSGT00940000160139 ENSGT01080000257410.C ENSGT01100000263518.A.a.a.a ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000155581.A ENSGT00940000158764 ENSGT00700000104550.a Sarcopterygii ANCESTRAL SPECIES 268 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000155581.A ENSGT00940000158764 ENSGT01040000240511.R ENSGT01060000248530.C Tetrapoda ANCESTRAL SPECIES 56 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT01070000255540 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00700000104550.a ENSGT00940000158986 ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00940000163461.b ENSGT00940000160950 ENSGT00390000018330 ENSGT00940000159233 Amniota ANCESTRAL SPECIES 19 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00700000104550.a ENSGT00940000158986 ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160950 ENSGT00390000018330 ENSGT00940000159233 Mammalia ANCESTRAL SPECIES 77 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00700000104550.a ENSGT00940000158986 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 ENSGT00940000160486 ENSGT00940000156142 ENSGT00940000158405 ENSGT00940000154090.b ENSGT00720000108866 ENSGT00950000186009 ENSGT00940000162174 Theria ANCESTRAL SPECIES 19 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 Eutheria ANCESTRAL SPECIES 11 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00930000151259 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Primates ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.b ##24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Tarsier MODERN SPECIES 4029 SNTA1 (ENSTSYG00000031328) #22 CDK5RAP1 (ENSTSYG00000013061) #23 BPIFB1 (ENSTSYG00000028664) #24 BPIFA1 (ENSTSYG00000013665) #25 BPIFA3 (ENSTSYG00000034882) #26 BPIFA2 (ENSTSYG00000036461) #27 BPIFB4 (ENSTSYG00000036167) #28 BPIFB3 (ENSTSYG00000007131) #29 BPIFB6 (ENSTSYG00000026610) #30 BPIFB2 (ENSTSYG00000030972) #31 SUN5 (ENSTSYG00000009982) #32 Simiiformes ANCESTRAL SPECIES 18 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Catarrhini ANCESTRAL SPECIES 19 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.a.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.a.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Vervet Monkey MODERN SPECIES 11 MAP1LC3A (ENSCSAG00000012080) DYNLRB1 (ENSCSAG00000012088) ITCH (ENSCSAG00000012102) AHCY (ENSCSAG00000012115) ASIP (ENSCSAG00000012125) EIF2S2 (ENSCSAG00000012138) RALY (ENSCSAG00000012199) CHMP4B (ENSCSAG00000012213) ZNF341 (ENSCSAG00000012235) PXMP4 (ENSCSAG00000012247) E2F1 (ENSCSAG00000012265) ACTL10 (ENSCSAG00000018668) C20orf144 (ENSCSAG00000012277) NECAB3 (ENSCSAG00000012279) CBFA2T2 (ENSCSAG00000012281) SNTA1 (ENSCSAG00000012284) #22 CDK5RAP1 (ENSCSAG00000012289) #23 BPIFB1 (ENSCSAG00000012293) #24 BPIFA1 (ENSCSAG00000012315) #25 BPIFA3 (ENSCSAG00000012337) #26 BPIFA2 (ENSCSAG00000012361) #27 BPIFB4 (ENSCSAG00000012383) #28 BPIFB3 (ENSCSAG00000012411) #29 BPIFB6 (ENSCSAG00000012441) #30 BPIFB2 (ENSCSAG00000012461) #31 SUN5 (ENSCSAG00000012504) #32 ENSCSAG00000012522 MAPRE1 (ENSCSAG00000012529) DNMT3B (ENSCSAG00000012573) COMMD7 (ENSCSAG00000012589) ENSCSAG00000012596 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Macaca ANCESTRAL SPECIES 16 ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.a.b ##24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Macaca_a ANCESTRAL SPECIES 18 ENSGT00940000154258.a ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT01100000263539.b.b.b.a.a.a.b ENSGT00940000159472 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.b.b.a.a.a.b.a.a.b.a ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.b.b.b ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.a.b ##24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Crab-eating macaque MODERN SPECIES 1 RALY (ENSMFAG00000033131) ENSMFAG00000050321 ENSMFAG00000051093 CHMP4B (ENSMFAG00000040050) ENSMFAG00000045920 ENSMFAG00000039376 ENSMFAG00000047376 E2F1 (ENSMFAG00000042416) C20orf144 (ENSMFAG00000038184) NECAB3 (ENSMFAG00000035873) ENSMFAG00000050553 CBFA2T2 (ENSMFAG00000000820) ENSMFAG00000051247 ENSMFAG00000047567 ENSMFAG00000053042 SNTA1 (ENSMFAG00000039231) #22 CDK5RAP1 (ENSMFAG00000040526) #23 BPIFB1 (ENSMFAG00000036542) #24 BPIFA1 (ENSMFAG00000041209) #25 BPIFA3 (ENSMFAG00000002677) #26 BPIFA2 (ENSMFAG00000032051) #27 BPIFB4 (ENSMFAG00000030797) #28 BPIFB3 (ENSMFAG00000042929) #29 BPIFB6 (ENSMFAG00000036761) #30 BPIFB2 (ENSMFAG00000040564) #31 SUN5 (ENSMFAG00000035909) #32 EFCAB8 (ENSMFAG00000006242) MAPRE1 (ENSMFAG00000007474) DNMT3B (ENSMFAG00000040834) COMMD7 (ENSMFAG00000041599) C20orf203 (ENSMFAG00000063893) Pig-tailed macaque MODERN SPECIES 232 ASIP (ENSMNEG00000040686) ENSMNEG00000029730 ENSMNEG00000044539 EIF2S2 (ENSMNEG00000029852) ENSMNEG00000018000 RALY (ENSMNEG00000044988) ENSMNEG00000039504 CHMP4B (ENSMNEG00000032657) ZNF341 (ENSMNEG00000034107) PXMP4 (ENSMNEG00000010793) E2F1 (ENSMNEG00000027050) ACTL10 (ENSMNEG00000026090) C20orf144 (ENSMNEG00000045111) NECAB3 (ENSMNEG00000040091) CBFA2T2 (ENSMNEG00000034428) SNTA1 (ENSMNEG00000038405) #22 CDK5RAP1 (ENSMNEG00000045565) #23 BPIFB1 (ENSMNEG00000043489) #24 BPIFA1 (ENSMNEG00000044088) #25 BPIFA3 (ENSMNEG00000005575) #26 ENSMNEG00000028931 ##24 BPIFA2 (ENSMNEG00000042823) #27 BPIFB4 (ENSMNEG00000043965) #28 BPIFB3 (ENSMNEG00000038601) #29 BPIFB6 (ENSMNEG00000035018) #30 BPIFB2 (ENSMNEG00000029774) #31 SUN5 (ENSMNEG00000033611) #32 ENSMNEG00000036815 EFCAB8 (ENSMNEG00000035540) MAPRE1 (ENSMNEG00000039307) DNMT3B (ENSMNEG00000038981) Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00390000007890.c.a ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00390000007890.c.a ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Drill MODERN SPECIES 1448 ENSMLEG00000033651 EIF2S2 (ENSMLEG00000039854) ENSMLEG00000004937 RALY (ENSMLEG00000028900) ENSMLEG00000000187 CHMP4B (ENSMLEG00000033156) ZNF341 (ENSMLEG00000031946) PXMP4 (ENSMLEG00000032170) E2F1 (ENSMLEG00000004422) ACTL10 (ENSMLEG00000008960) C20orf144 (ENSMLEG00000044204) NECAB3 (ENSMLEG00000041816) ENSMLEG00000010723 CBFA2T2 (ENSMLEG00000042497) SNTA1 (ENSMLEG00000040271) #22 CDK5RAP1 (ENSMLEG00000029036) #23 Sooty mangabey MODERN SPECIES 602 ENSCATG00000039901 ENSCATG00000044570 ENSCATG00000044082 ENSCATG00000022568 RALY (ENSCATG00000031769) ENSCATG00000032333 CHMP4B (ENSCATG00000044221) ZNF341 (ENSCATG00000011236) PXMP4 (ENSCATG00000044653) E2F1 (ENSCATG00000039419) ACTL10 (ENSCATG00000022465) C20orf144 (ENSCATG00000044672) NECAB3 (ENSCATG00000034703) ENSCATG00000022295 CBFA2T2 (ENSCATG00000006176) SNTA1 (ENSCATG00000044322) #22 CDK5RAP1 (ENSCATG00000039579) #23 BPIFB1 (ENSCATG00000026260) #24 BPIFA1 (ENSCATG00000042760) #25 BPIFA3 (ENSCATG00000041213) #26 ENSCATG00000029740 BPIFA2 (ENSCATG00000042233) #27 BPIFB4 (ENSCATG00000008536) #28 BPIFB3 (ENSCATG00000043728) #29 BPIFB6 (ENSCATG00000032216) #30 BPIFB2 (ENSCATG00000035818) #31 SUN5 (ENSCATG00000030423) #32 ENSCATG00000038780 EFCAB8 (ENSCATG00000043154) MAPRE1 (ENSCATG00000041722) DNMT3B (ENSCATG00000029815) Rhinopithecus ANCESTRAL SPECIES 28 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.b ENSGT00390000001804.cb.b.a.b.d ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928.a ENSGT00390000012419 Black snub-nosed monkey MODERN SPECIES 751 SNTA1 (ENSRBIG00000036776) #22 CDK5RAP1 (ENSRBIG00000041507) #23 BPIFB1 (ENSRBIG00000023420) #24 BPIFA1 (ENSRBIG00000028541) #25 BPIFA3 (ENSRBIG00000035313) #26 ENSRBIG00000028643 BPIFA2 (ENSRBIG00000015461) #27 BPIFB4 (ENSRBIG00000032341) #28 BPIFB3 (ENSRBIG00000036953) #29 BPIFB6 (ENSRBIG00000024079) #30 BPIFB2 (ENSRBIG00000034361) #31 SUN5 (ENSRBIG00000030532) #32 EFCAB8 (ENSRBIG00000043449) MAPRE1 (ENSRBIG00000042693) ENSRBIG00000040209 COMMD7 (ENSRBIG00000029627) Golden snub-nosed monkey MODERN SPECIES 896 ENSRROG00000039774 CHMP4B (ENSRROG00000029883) ZNF341 (ENSRROG00000032773) PXMP4 (ENSRROG00000033853) E2F1 (ENSRROG00000039358) NECAB3 (ENSRROG00000010016) ACTL10 (ENSRROG00000009546) C20orf144 (ENSRROG00000044990) CBFA2T2 (ENSRROG00000035361) SNTA1 (ENSRROG00000042592) #22 CDK5RAP1 (ENSRROG00000037532) #23 BPIFB1 (ENSRROG00000034793) #24 BPIFA1 (ENSRROG00000029579) #25 BPIFA3 (ENSRROG00000041448) #26 ENSRROG00000045498 BPIFA2 (ENSRROG00000038035) #27 BPIFB4 (ENSRROG00000043803) #28 BPIFB3 (ENSRROG00000040199) #29 BPIFB6 (ENSRROG00000030178) #30 BPIFB2 (ENSRROG00000041108) #31 SUN5 (ENSRROG00000043627) #32 Hominoidea ANCESTRAL SPECIES 17 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Hominidae ANCESTRAL SPECIES 18 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00940000157014 ENSGT00940000163568 ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00940000157014 ENSGT00940000163568 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Pan ANCESTRAL SPECIES 15 ENSGT00940000157014 ENSGT00940000163568 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.d ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Chimpanzee MODERN SPECIES 11 AHCY (ENSPTRG00000013414) ASIP (ENSPTRG00000013413) ENSPTRG00000046065 ENSPTRG00000045368 EIF2S2 (ENSPTRG00000013412) RALY (ENSPTRG00000013410) CHMP4B (ENSPTRG00000013408) ENSPTRG00000045113 ZNF341 (ENSPTRG00000013406) PXMP4 (ENSPTRG00000013405) E2F1 (ENSPTRG00000013404) ENSPTRG00000047541 C20H20orf144 (ENSPTRG00000013403) NECAB3 (ENSPTRG00000013402) CBFA2T2 (ENSPTRG00000013401) SNTA1 (ENSPTRG00000013400) #22 CDK5RAP1 (ENSPTRG00000013399) #23 BPIFB1 (ENSPTRG00000013396) #24 BPIFA1 (ENSPTRG00000013395) #25 BPIFA3 (ENSPTRG00000013393) #26 ENSPTRG00000049909 BPIFA2 (ENSPTRG00000013391) #27 BPIFB4 (ENSPTRG00000013390) #28 BPIFB3 (ENSPTRG00000022778) #29 BPIFB6 (ENSPTRG00000013388) #30 BPIFB2 (ENSPTRG00000013387) #31 SUN5 (ENSPTRG00000024395) #32 EFCAB8 (ENSPTRG00000034012) MAPRE1 (ENSPTRG00000013385) DNMT3B (ENSPTRG00000013384) COMMD7 (ENSPTRG00000013383) Bonobo MODERN SPECIES 11 ASIP (ENSPPAG00000031015) ENSPPAG00000043799 ENSPPAG00000041601 ENSPPAG00000041611 ENSPPAG00000043449 RALY (ENSPPAG00000034951) CHMP4B (ENSPPAG00000028496) ENSPPAG00000037596 ZNF341 (ENSPPAG00000037384) PXMP4 (ENSPPAG00000028570) E2F1 (ENSPPAG00000025868) ACTL10 (ENSPPAG00000026624) C20orf144 (ENSPPAG00000042847) NECAB3 (ENSPPAG00000039394) CBFA2T2 (ENSPPAG00000042396) SNTA1 (ENSPPAG00000029137) #22 CDK5RAP1 (ENSPPAG00000008989) #23 BPIFB1 (ENSPPAG00000029535) #24 BPIFA1 (ENSPPAG00000034693) #25 BPIFA3 (ENSPPAG00000011914) #26 ENSPPAG00000041776 BPIFA2 (ENSPPAG00000038731) #27 BPIFB4 (ENSPPAG00000042697) #28 BPIFB3 (ENSPPAG00000036747) #29 BPIFB6 (ENSPPAG00000019659) #30 BPIFB2 (ENSPPAG00000041501) #31 SUN5 (ENSPPAG00000029851) #32 EFCAB8 (ENSPPAG00000043457) MAPRE1 (ENSPPAG00000025593) DNMT3B (ENSPPAG00000034470) COMMD7 (ENSPPAG00000038127) Human MODERN SPECIES 12 MAP1LC3A (ENSG00000101460) DYNLRB1 (ENSG00000125971) ITCH (ENSG00000078747) AHCY (ENSG00000101444) ASIP (ENSG00000101440) EIF2S2 (ENSG00000125977) RALY (ENSG00000125970) CHMP4B (ENSG00000101421) ZNF341 (ENSG00000131061) PXMP4 (ENSG00000101417) E2F1 (ENSG00000101412) ACTL10 (ENSG00000288649) C20orf144 (ENSG00000149609) NECAB3 (ENSG00000125967) CBFA2T2 (ENSG00000078699) SNTA1 (ENSG00000101400) #22 CDK5RAP1 (ENSG00000101391) #23 BPIFB1 (ENSG00000125999) #24 BPIFA1 (ENSG00000198183) #25 BPIFA3 (ENSG00000131059) #26 BPIFA2 (ENSG00000131050) #27 BPIFB4 (ENSG00000186191) #28 BPIFB3 (ENSG00000186190) #29 BPIFB6 (ENSG00000167104) #30 BPIFB2 (ENSG00000078898) #31 SUN5 (ENSG00000167098) #32 EFCAB8 (ENSG00000215529) MAPRE1 (ENSG00000101367) DNMT3B (ENSG00000088305) COMMD7 (ENSG00000149600) ENSG00000285382 Gorilla MODERN SPECIES 11 ENSGGOG00000040622 ASIP (ENSGGOG00000026572) ENSGGOG00000027170 ENSGGOG00000015546 RALY (ENSGGOG00000022709) CHMP4B (ENSGGOG00000007775) ENSGGOG00000025590 ZNF341 (ENSGGOG00000015775) PXMP4 (ENSGGOG00000044115) E2F1 (ENSGGOG00000003588) ACTL10 (ENSGGOG00000042107) C20orf144 (ENSGGOG00000038124) NECAB3 (ENSGGOG00000003584) ENSGGOG00000043692 ENSGGOG00000003578 SNTA1 (ENSGGOG00000008508) #22 ENSGGOG00000003253 #23 BPIFB1 (ENSGGOG00000003242) #24 BPIFA1 (ENSGGOG00000027809) #25 BPIFA3 (ENSGGOG00000023198) #26 ENSGGOG00000017163 BPIFA2 (ENSGGOG00000017162) #27 BPIFB4 (ENSGGOG00000011742) #28 BPIFB3 (ENSGGOG00000010657) #29 BPIFB6 (ENSGGOG00000010638) #30 BPIFB2 (ENSGGOG00000010625) #31 SUN5 (ENSGGOG00000008288) #32 EFCAB8 (ENSGGOG00000000152) ENSGGOG00000022496 DNMT3B (ENSGGOG00000009533) ENSGGOG00000026150 Orangutan MODERN SPECIES 11 ENSPPYG00000010937 ITCH (ENSPPYG00000010936) AHCY (ENSPPYG00000010935) ENSPPYG00000010934 EIF2S2 (ENSPPYG00000010933) ENSPPYG00000010932 ENSPPYG00000041388 CHMP4B (ENSPPYG00000010931) ZNF341 (ENSPPYG00000010930) PXMP4 (ENSPPYG00000041080) E2F1 (ENSPPYG00000010929) ACTL10 (ENSPPYG00000010928) C20orf144 (ENSPPYG00000010927) NECAB3 (ENSPPYG00000010926) CBFA2T2 (ENSPPYG00000010925) SNTA1 (ENSPPYG00000010924) #22 CDK5RAP1 (ENSPPYG00000010923) #23 BPIFB1 (ENSPPYG00000010919) #24 BPIFA1 (ENSPPYG00000010918) #25 BPIFA3 (ENSPPYG00000010917) #26 BPIFA2 (ENSPPYG00000010915) #27 ENSPPYG00000011281 #28 BPIFB3 (ENSPPYG00000011280) #29 BPIFB6 (ENSPPYG00000011279) #30 BPIFB2 (ENSPPYG00000011278) #31 SUN5 (ENSPPYG00000010914) #32 EFCAB8 (ENSPPYG00000032398) ENSPPYG00000035142 MAPRE1 (ENSPPYG00000032390) DNMT3B (ENSPPYG00000010911) COMMD7 (ENSPPYG00000010910) Gibbon MODERN SPECIES 3 ENSNLEG00000010082 ITCH (ENSNLEG00000010045) ENSNLEG00000030506 ENSNLEG00000010041 ENSNLEG00000028939 EIF2S2 (ENSNLEG00000010034) ENSNLEG00000010031 ENSNLEG00000035552 CHMP4B (ENSNLEG00000010020) ZNF341 (ENSNLEG00000010013) ENSNLEG00000029978 E2F1 (ENSNLEG00000010009) ENSNLEG00000009989 C20orf144 (ENSNLEG00000010006) CBFA2T2 (ENSNLEG00000009976) SNTA1 (ENSNLEG00000009970) #22 CDK5RAP1 (ENSNLEG00000009942) #23 BPIFB1 (ENSNLEG00000009918) #24 ENSNLEG00000009915 #25 BPIFA3 (ENSNLEG00000009907) #26 ENSNLEG00000032607 BPIFA2 (ENSNLEG00000009895) #27 BPIFB4 (ENSNLEG00000009889) #28 BPIFB3 (ENSNLEG00000009874) #29 BPIFB6 (ENSNLEG00000009863) #30 BPIFB2 (ENSNLEG00000009854) #31 SUN5 (ENSNLEG00000009839) #32 MAPRE1 (ENSNLEG00000009828) DNMT3B (ENSNLEG00000009819) ENSNLEG00000033204 ENSNLEG00000009815 Platyrrhini ANCESTRAL SPECIES 11 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Mas night monkey MODERN SPECIES 1017 ENSANAG00000023825 ITCH (ENSANAG00000027856) ENSANAG00000014301 ENSANAG00000033573 ASIP (ENSANAG00000030668) ENSANAG00000022839 RALY (ENSANAG00000019376) CHMP4B (ENSANAG00000023014) ZNF341 (ENSANAG00000023240) PXMP4 (ENSANAG00000031512) E2F1 (ENSANAG00000029428) C20orf144 (ENSANAG00000028577) NECAB3 (ENSANAG00000024109) CBFA2T2 (ENSANAG00000029831) ENSANAG00000022327 SNTA1 (ENSANAG00000021276) #22 CDK5RAP1 (ENSANAG00000036607) #23 BPIFB1 (ENSANAG00000024111) #24 BPIFA1 (ENSANAG00000023955) #25 BPIFA3 (ENSANAG00000029660) #26 ENSANAG00000026946 BPIFA2 (ENSANAG00000020124) #27 BPIFB4 (ENSANAG00000021575) #28 BPIFB3 (ENSANAG00000005106) #29 BPIFB6 (ENSANAG00000034061) #30 BPIFB2 (ENSANAG00000023925) #31 SUN5 (ENSANAG00000026404) #32 EFCAB8 (ENSANAG00000029449) MAPRE1 (ENSANAG00000035566) ENSANAG00000025386 COMMD7 (ENSANAG00000007345) Cebidae ANCESTRAL SPECIES 13 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a.c ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 Marmoset MODERN SPECIES 17 ITCH (ENSCJAG00000018204) ENSCJAG00000047561 ENSCJAG00000084324 AHCY (ENSCJAG00000018303) ASIP (ENSCJAG00000018327) ENSCJAG00000018334 ENSCJAG00000018361 CHMP4B (ENSCJAG00000018397) ZNF341 (ENSCJAG00000018423) PXMP4 (ENSCJAG00000080526) E2F1 (ENSCJAG00000018451) NECAB3 (ENSCJAG00000018455) ACTL10 (ENSCJAG00000058257) CBFA2T2 (ENSCJAG00000018475) ENSCJAG00000071493 SNTA1 (ENSCJAG00000046751) #22 CDK5RAP1 (ENSCJAG00000018500) #23 ENSCJAG00000074490 BPIFB1 (ENSCJAG00000018531) #24 BPIFA1 (ENSCJAG00000018547) #25 BPIFA3 (ENSCJAG00000018565) #26 BPIFA2 (ENSCJAG00000018544) #27 BPIFB4 (ENSCJAG00000034914) #28 BPIFB3 (ENSCJAG00000018580) #29 BPIFB6 (ENSCJAG00000018589) #30 BPIFB2 (ENSCJAG00000018598) #31 SUN5 (ENSCJAG00000018611) #32 EFCAB8 (ENSCJAG00000083357) ENSCJAG00000015601 DNMT3B (ENSCJAG00000015617) ENSCJAG00000072168 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a.c ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Capuchin MODERN SPECIES 18 ITCH (ENSCCAG00000036090) ENSCCAG00000036415 ASIP (ENSCCAG00000034213) ENSCCAG00000035446 RALY (ENSCCAG00000024548) CHMP4B (ENSCCAG00000035412) ZNF341 (ENSCCAG00000022663) PXMP4 (ENSCCAG00000023929) E2F1 (ENSCCAG00000031862) NECAB3 (ENSCCAG00000025337) ACTL10 (ENSCCAG00000020021) C20orf144 (ENSCCAG00000001393) CBFA2T2 (ENSCCAG00000030202) ENSCCAG00000020608 ENSCCAG00000023290 SNTA1 (ENSCCAG00000037245) #22 CDK5RAP1 (ENSCCAG00000031228) #23 BPIFB1 (ENSCCAG00000015758) #24 BPIFA1 (ENSCCAG00000021907) #25 BPIFA3 (ENSCCAG00000022344) #26 ENSCCAG00000034919 ##24 BPIFA2 (ENSCCAG00000021755) #27 BPIFB4 (ENSCCAG00000027553) #28 BPIFB3 (ENSCCAG00000022192) #29 BPIFB6 (ENSCCAG00000030049) #30 BPIFB2 (ENSCCAG00000030652) #31 SUN5 (ENSCCAG00000034764) #32 EFCAB8 (ENSCCAG00000022910) MAPRE1 (ENSCCAG00000030764) ENSCCAG00000020225 COMMD7 (ENSCCAG00000031234) Bolivian squirrel monkey MODERN SPECIES 89 MAP1LC3A (ENSSBOG00000027529) ENSSBOG00000034562 ITCH (ENSSBOG00000028570) AHCY (ENSSBOG00000018930) ENSSBOG00000035159 ENSSBOG00000020845 RALY (ENSSBOG00000001418) CHMP4B (ENSSBOG00000030524) ZNF341 (ENSSBOG00000026329) PXMP4 (ENSSBOG00000005223) E2F1 (ENSSBOG00000028962) NECAB3 (ENSSBOG00000036045) ACTL10 (ENSSBOG00000004671) C20orf144 (ENSSBOG00000026299) CBFA2T2 (ENSSBOG00000029834) SNTA1 (ENSSBOG00000020201) #22 CDK5RAP1 (ENSSBOG00000034885) #23 BPIFB1 (ENSSBOG00000023508) #24 BPIFA1 (ENSSBOG00000033533) #25 BPIFA3 (ENSSBOG00000031059) #26 ENSSBOG00000035555 BPIFA2 (ENSSBOG00000031635) #27 BPIFB4 (ENSSBOG00000034867) #28 BPIFB3 (ENSSBOG00000035285) #29 BPIFB6 (ENSSBOG00000015194) #30 BPIFB2 (ENSSBOG00000023467) #31 SUN5 (ENSSBOG00000036230) #32 EFCAB8 (ENSSBOG00000035195) MAPRE1 (ENSSBOG00000026959) DNMT3B (ENSSBOG00000030711) NOL4L (ENSSBOG00000020030) Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c Lemuriformes_a ANCESTRAL SPECIES 26 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c Coquerels sifaka MODERN SPECIES 126 ITCH (ENSPCOG00000009922) ENSPCOG00000023647 AHCY (ENSPCOG00000028404) ASIP (ENSPCOG00000010026) ENSPCOG00000016748 ENSPCOG00000016432 EIF2S2 (ENSPCOG00000023384) RALY (ENSPCOG00000016363) CHMP4B (ENSPCOG00000019410) ZNF341 (ENSPCOG00000023267) PXMP4 (ENSPCOG00000024717) E2F1 (ENSPCOG00000020987) NECAB3 (ENSPCOG00000028089) ENSPCOG00000016999 CBFA2T2 (ENSPCOG00000018468) SNTA1 (ENSPCOG00000027507) #22 CDK5RAP1 (ENSPCOG00000024202) #23 BPIFB1 (ENSPCOG00000028115) #24 BPIFA1 (ENSPCOG00000015572) #25 BPIFA2 (ENSPCOG00000020981) #27 BPIFB4 (ENSPCOG00000014355) #28 BPIFB3 (ENSPCOG00000002263) #29 BPIFB6 (ENSPCOG00000019939) #30 BPIFB2 (ENSPCOG00000024187) #31 SUN5 (ENSPCOG00000021842) #32 EFCAB8 (ENSPCOG00000003137) MAPRE1 (ENSPCOG00000011361) ENSPCOG00000011905 DNMT3B (ENSPCOG00000025216) ENSPCOG00000021565 NOL4L (ENSPCOG00000013169) Greater bamboo lemur MODERN SPECIES 98 MAP1LC3A (ENSPSMG00000018505) ENSPSMG00000018498 ITCH (ENSPSMG00000018448) AHCY (ENSPSMG00000018371) ASIP (ENSPSMG00000018334) EIF2S2 (ENSPSMG00000018322) RALY (ENSPSMG00000018249) CHMP4B (ENSPSMG00000018182) ZNF341 (ENSPSMG00000018155) PXMP4 (ENSPSMG00000018104) E2F1 (ENSPSMG00000018083) ACTL10 (ENSPSMG00000018073) ENSPSMG00000018069 NECAB3 (ENSPSMG00000018052) CBFA2T2 (ENSPSMG00000017990) SNTA1 (ENSPSMG00000017942) #22 ENSPSMG00000017928 #23 Mouse lemur MODERN SPECIES 9 MAP1LC3A (ENSMICG00000028466) DYNLRB1 (ENSMICG00000003253) ITCH (ENSMICG00000003238) ENSMICG00000034345 ENSMICG00000032740 AHCY (ENSMICG00000003232) ASIP (ENSMICG00000044506) ENSMICG00000006944 RALY (ENSMICG00000039074) ENSMICG00000042802 ZNF341 (ENSMICG00000047832) ENSMICG00000028174 E2F1 (ENSMICG00000006921) NECAB3 (ENSMICG00000006906) ENSMICG00000006895 SNTA1 (ENSMICG00000004936) #22 CDK5RAP1 (ENSMICG00000004382) #23 BPIFB1 (ENSMICG00000004357) #24 BPIFA1 (ENSMICG00000004348) #25 BPIFA2 (ENSMICG00000013403) #27 BPIFB4 (ENSMICG00000026403) #28 BPIFB3 (ENSMICG00000001990) #29 BPIFB6 (ENSMICG00000001984) #30 BPIFB2 (ENSMICG00000001979) #31 SUN5 (ENSMICG00000001971) #32 EFCAB8 (ENSMICG00000036641) MAPRE1 (ENSMICG00000047719) DNMT3B (ENSMICG00000006679) COMMD7 (ENSMICG00000006672) NOL4L (ENSMICG00000006651) ASXL1 (ENSMICG00000038277) Bushbaby MODERN SPECIES 140 MAP1LC3A (ENSOGAG00000027682) ENSOGAG00000016802 ITCH (ENSOGAG00000016792) AHCY (ENSOGAG00000016787) ENSOGAG00000001417 RALY (ENSOGAG00000032337) ENSOGAG00000013532 CHMP4B (ENSOGAG00000010444) ZNF341 (ENSOGAG00000010441) PXMP4 (ENSOGAG00000010440) E2F1 (ENSOGAG00000024304) ACTL10 (ENSOGAG00000010438) NECAB3 (ENSOGAG00000028758) CBFA2T2 (ENSOGAG00000015051) ENSOGAG00000032821 SNTA1 (ENSOGAG00000027133) #22 CDK5RAP1 (ENSOGAG00000010764) #23 ENSOGAG00000010760 ENSOGAG00000024646 ##24 BPIFB1 (ENSOGAG00000010753) #24 BPIFA1 (ENSOGAG00000010750) #25 BPIFA2 (ENSOGAG00000010742) #27 ENSOGAG00000027213 BPIFB4 (ENSOGAG00000010737) #28 BPIFB3 (ENSOGAG00000015673) #29 BPIFB6 (ENSOGAG00000015669) #30 BPIFB2 (ENSOGAG00000015664) #31 SUN5 (ENSOGAG00000015660) #32 ENSOGAG00000026557 DNMT3B (ENSOGAG00000004720) COMMD7 (ENSOGAG00000004718) Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Tree shrew MODERN SPECIES 1365 SNTA1 (ENSTBEG00000006415) #22 CDK5RAP1 (ENSTBEG00000006040) #23 ENSTBEG00000005761 ENSTBEG00000005479 BPIFB1 (ENSTBEG00000003648) #24 BPIFA1 (ENSTBEG00000003115) #25 ENSTBEG00000001858 ENSTBEG00000001404 ENSTBEG00000000864 Glires ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Lagomorpha ANCESTRAL SPECIES 33 ENSGT00730000111114 ENSGT00390000014941 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000167211 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Rabbit MODERN SPECIES 15 ENSOCUG00000009634 PIGU (ENSOCUG00000009627) ENSOCUG00000021027 ITCH (ENSOCUG00000015354) ENSOCUG00000008592 ENSOCUG00000036618 asip (ENSOCUG00000011138) ENSOCUG00000038624 EIF2S2 (ENSOCUG00000000481) RALY (ENSOCUG00000000477) ZNF341 (ENSOCUG00000024028) PXMP4 (ENSOCUG00000005415) NECAB3 (ENSOCUG00000000850) ENSOCUG00000000854 CBFA2T2 (ENSOCUG00000000849) SNTA1 (ENSOCUG00000011916) #22 CDK5RAP1 (ENSOCUG00000017069) #23 ENSOCUG00000017051 #24 BPIFA1 (ENSOCUG00000007538) #25 ENSOCUG00000015717 #26 BPIFB3 (ENSOCUG00000014883) #29 BPIFB6 (ENSOCUG00000006815) #30 BPIFB2 (ENSOCUG00000027554) #31 SUN5 (ENSOCUG00000022223) #32 ENSOCUG00000035490 MAPRE1 (ENSOCUG00000024265) DNMT3B (ENSOCUG00000017835) ENSOCUG00000014339 NOL4L (ENSOCUG00000010835) ASXL1 (ENSOCUG00000035849) KIF3B (ENSOCUG00000021741) Pika MODERN SPECIES 4588 SNTA1 (ENSOPRG00000006874) #22 CDK5RAP1 (ENSOPRG00000006858) #23 ENSOPRG00000006855 ENSOPRG00000006842 BPIFB1 (ENSOPRG00000006828) #24 BPIFA1 (ENSOPRG00000006812) #25 BPIFA3 (ENSOPRG00000006798) #26 ENSOPRG00000006785 ENSOPRG00000006766 BPIFB4 (ENSOPRG00000006756) #28 BPIFB3 (ENSOPRG00000006748) #29 BPIFB2 (ENSOPRG00000006729) #31 SUN5 (ENSOPRG00000006713) #32 ENSOPRG00000018610 MAPRE1 (ENSOPRG00000006707) DNMT3B (ENSOPRG00000006680) Rodentia ANCESTRAL SPECIES 18 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Rodentia_A ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 Sciuridae ANCESTRAL SPECIES 13 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.l ENSGT00940000156928 ENSGT00390000012419 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.l ENSGT00940000156928 ENSGT00390000012419 Alpin marmot MODERN SPECIES PIGU (ENSMMMG00000023384) DYNLRB1 (ENSMMMG00000023395) ITCH (ENSMMMG00000023404) ENSMMMG00000023413 AHCY (ENSMMMG00000023416) ASIP (ENSMMMG00000023418) EIF2S2 (ENSMMMG00000023422) RALY (ENSMMMG00000023423) CHMP4B (ENSMMMG00000023441) ZNF341 (ENSMMMG00000023444) PXMP4 (ENSMMMG00000023451) E2F1 (ENSMMMG00000023454) NECAB3 (ENSMMMG00000023457) ACTL10 (ENSMMMG00000023461) CBFA2T2 (ENSMMMG00000023462) SNTA1 (ENSMMMG00000023469) #22 CDK5RAP1 (ENSMMMG00000023644) #23 ENSMMMG00000023646 ##24 BPIFB1 (ENSMMMG00000023647) #24 BPIFA1 (ENSMMMG00000023653) #25 BPIFA3 (ENSMMMG00000023655) #26 ENSMMMG00000023661 ENSMMMG00000023662 BPIFB4 (ENSMMMG00000023664) #28 BPIFB3 (ENSMMMG00000023666) #29 BPIFB6 (ENSMMMG00000023672) #30 BPIFB2 (ENSMMMG00000023676) #31 SUN5 (ENSMMMG00000023678) #32 EFCAB8 (ENSMMMG00000023682) ENSMMMG00000023683 DNMT3B (ENSMMMG00000023686) Marmotini_b ANCESTRAL SPECIES 29 ENSGT00940000158853 ENSGT00390000011067.A.o.b ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 Arctic ground squirrel MODERN SPECIES 24 MAP1LC3A (ENSUPAG00010004647) DYNLRB1 (ENSUPAG00010004657) ITCH (ENSUPAG00010004671) AHCY (ENSUPAG00010004706) ASIP (ENSUPAG00010004712) EIF2S2 (ENSUPAG00010004723) RALY (ENSUPAG00010004731) CHMP4B (ENSUPAG00010004793) ZNF341 (ENSUPAG00010004795) PXMP4 (ENSUPAG00010004822) E2F1 (ENSUPAG00010004824) NECAB3 (ENSUPAG00010004839) ACTL10 (ENSUPAG00010004872) C20orf144 (ENSUPAG00010004879) CBFA2T2 (ENSUPAG00010004884) SNTA1 (ENSUPAG00010004904) #22 CDK5RAP1 (ENSUPAG00010004922) #23 ENSUPAG00010004995 ENSUPAG00010004998 ##24 ENSUPAG00010005007 #24 Squirrel MODERN SPECIES 161 PIGU (ENSSTOG00000014830) MAP1LC3A (ENSSTOG00000006158) ENSSTOG00000014820 ITCH (ENSSTOG00000014804) AHCY (ENSSTOG00000003013) ASIP (ENSSTOG00000003501) EIF2S2 (ENSSTOG00000008821) RALY (ENSSTOG00000008810) CHMP4B (ENSSTOG00000005242) ZNF341 (ENSSTOG00000002753) PXMP4 (ENSSTOG00000002748) E2F1 (ENSSTOG00000002735) NECAB3 (ENSSTOG00000028643) ACTL10 (ENSSTOG00000000902) CBFA2T2 (ENSSTOG00000003478) SNTA1 (ENSSTOG00000020522) #22 CDK5RAP1 (ENSSTOG00000005492) #23 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005003157 ENSSVLG00005003145 ENSSVLG00005003129 EIF2S2 (ENSSVLG00005003099) ENSSVLG00005003066 CHMP4B (ENSSVLG00005003046) ENSSVLG00005003036 ZNF341 (ENSSVLG00005003010) PXMP4 (ENSSVLG00005002986) E2F1 (ENSSVLG00005002971) ACTL10 (ENSSVLG00005002962) ENSSVLG00005002949 NECAB3 (ENSSVLG00005002907) ENSSVLG00005002886 CBFA2T2 (ENSSVLG00005002847) SNTA1 (ENSSVLG00005002824) #22 CDK5RAP1 (ENSSVLG00005002783) #23 ENSSVLG00005002725 BPIFB1 (ENSSVLG00005002680) #24 BPIFA1 (ENSSVLG00005002640) #25 BPIFA3 (ENSSVLG00005002605) #26 BPIFB4 (ENSSVLG00005002569) #28 BPIFB3 (ENSSVLG00005002532) #29 BPIFB6 (ENSSVLG00005002490) #30 BPIFB2 (ENSSVLG00005002451) #31 SUN5 (ENSSVLG00005002374) #32 ENSSVLG00005002338 ENSSVLG00005002322 ENSSVLG00005002127 COMMD7 (ENSSVLG00005002025) NOL4L (ENSSVLG00005001985) Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Hystricomorpha_b ANCESTRAL SPECIES 16 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a.i.a ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Long-tailed chinchilla MODERN SPECIES 129 MAP1LC3A (ENSCLAG00000016760) DYNLRB1 (ENSCLAG00000016878) ITCH (ENSCLAG00000016997) AHCY (ENSCLAG00000017278) ASIP (ENSCLAG00000017188) ENSCLAG00000017263 RALY (ENSCLAG00000016899) CHMP4B (ENSCLAG00000017205) ZNF341 (ENSCLAG00000016902) PXMP4 (ENSCLAG00000017245) E2F1 (ENSCLAG00000017077) NECAB3 (ENSCLAG00000017054) ACTL10 (ENSCLAG00000018112) ENSCLAG00000017072 CBFA2T2 (ENSCLAG00000017277) SNTA1 (ENSCLAG00000015283) #22 CDK5RAP1 (ENSCLAG00000015460) #23 BPIFB1 (ENSCLAG00000016830) #24 BPIFA1 (ENSCLAG00000017206) #25 BPIFA3 (ENSCLAG00000016843) #26 BPIFB4 (ENSCLAG00000016722) #28 BPIFB3 (ENSCLAG00000016914) #29 BPIFB6 (ENSCLAG00000016956) #30 BPIFB2 (ENSCLAG00000017195) #31 SUN5 (ENSCLAG00000017254) #32 ENSCLAG00000017109 DNMT3B (ENSCLAG00000017043) COMMD7 (ENSCLAG00000017227) NOL4L (ENSCLAG00000017265) ASXL1 (ENSCLAG00000017264) KIF3B (ENSCLAG00000016984) Degu MODERN SPECIES 78 ASIP (ENSODEG00000013289) ENSODEG00000020169 ENSODEG00000015189 ENSODEG00000012943 ENSODEG00000012151 ENSODEG00000012831 ENSODEG00000012366 ZNF341 (ENSODEG00000013884) PXMP4 (ENSODEG00000015173) E2F1 (ENSODEG00000012327) ENSODEG00000013210 NECAB3 (ENSODEG00000012739) ENSODEG00000013862 CBFA2T2 (ENSODEG00000012562) ENSODEG00000019960 SNTA1 (ENSODEG00000012817) #22 CDK5RAP1 (ENSODEG00000013190) #23 BPIFB1 (ENSODEG00000012392) #24 BPIFA1 (ENSODEG00000011803) #25 BPIFA3 (ENSODEG00000011797) #26 ENSODEG00000013174 ENSODEG00000012886 ENSODEG00000012670 BPIFB4 (ENSODEG00000013037) #28 BPIFB3 (ENSODEG00000012502) #29 BPIFB6 (ENSODEG00000011706) #30 BPIFB2 (ENSODEG00000012498) #31 SUN5 (ENSODEG00000012284) #32 ENSODEG00000012036 DNMT3B (ENSODEG00000011753) COMMD7 (ENSODEG00000014983) Guinea pig MODERN SPECIES 45 MAP1LC3A (ENSCPOG00000030093) PIGU (ENSCPOG00000013806) DYNLRB1 (ENSCPOG00000013798) ITCH (ENSCPOG00000013787) AHCY (ENSCPOG00000014740) ASIP (ENSCPOG00000005139) EIF2S2 (ENSCPOG00000040226) RALY (ENSCPOG00000000309) CHMP4B (ENSCPOG00000035794) ZNF341 (ENSCPOG00000003820) PXMP4 (ENSCPOG00000024804) E2F1 (ENSCPOG00000001800) ENSCPOG00000022109 NECAB3 (ENSCPOG00000020859) CBFA2T2 (ENSCPOG00000001721) SNTA1 (ENSCPOG00000005179) #22 CDK5RAP1 (ENSCPOG00000006663) #23 BPIFB1 (ENSCPOG00000005568) #24 BPIFA1 (ENSCPOG00000014220) #25 ENSCPOG00000013128 #26 Naked mole-rat female MODERN SPECIES 6 ITCH (ENSHGLG00000005001) AHCY (ENSHGLG00000009751) ENSHGLG00000031940 RALY (ENSHGLG00000017779) ENSHGLG00000042490 ENSHGLG00000032344 ENSHGLG00000041357 ZNF341 (ENSHGLG00000013786) PXMP4 (ENSHGLG00000016991) ENSHGLG00000041428 E2F1 (ENSHGLG00000009301) ENSHGLG00000009659 CBFA2T2 (ENSHGLG00000018266) ENSHGLG00000047164 ENSHGLG00000018147 SNTA1 (ENSHGLG00000006583) #22 CDK5RAP1 (ENSHGLG00000005146) #23 ENSHGLG00000039669 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Kangaroo rat MODERN SPECIES 332 Trp53inp2 (ENSDORG00000026160) Pigu (ENSDORG00000001715) ENSDORG00000029351 Dynlrb1 (ENSDORG00000028607) Itch (ENSDORG00000027257) ENSDORG00000012590 a (ENSDORG00000013768) Eif2s2 (ENSDORG00000001920) Raly (ENSDORG00000013400) Chmp4b (ENSDORG00000011539) Zfp341 (ENSDORG00000000005) Pxmp4 (ENSDORG00000030129) E2f1 (ENSDORG00000013793) Necab3 (ENSDORG00000013792) Cbfa2t2 (ENSDORG00000001656) Snta1 (ENSDORG00000029237) #22 Cdk5rap1 (ENSDORG00000004622) #23 Bpifb5 (ENSDORG00000028380) ##24 Bpifb1 (ENSDORG00000002282) #24 ENSDORG00000002276 #25 Bpifa3 (ENSDORG00000002275) #26 Bpifb4 (ENSDORG00000001190) #28 Bpifb3 (ENSDORG00000029748) #29 Bpifb6 (ENSDORG00000004324) #30 Bpifb2 (ENSDORG00000004323) #31 Mapre1 (ENSDORG00000023413) ENSDORG00000012834 Commd7 (ENSDORG00000002116) Nol4l (ENSDORG00000027893) ENSDORG00000028887 ENSDORG00000016544 Myomorpha ANCESTRAL SPECIES 9 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Lesser Egyptian jerboa MODERN SPECIES 149 Map1lc3a (ENSJJAG00000010977) ENSJJAG00000005483 Itch (ENSJJAG00000000211) ENSJJAG00000022935 a (ENSJJAG00000018926) ENSJJAG00000001144 Eif2s2 (ENSJJAG00000014081) Raly (ENSJJAG00000008473) Chmp4b (ENSJJAG00000013547) Zfp341 (ENSJJAG00000020905) Pxmp4 (ENSJJAG00000016829) E2f1 (ENSJJAG00000022378) 1700003F12Rik (ENSJJAG00000010475) Necab3 (ENSJJAG00000020960) Cbfa2t2 (ENSJJAG00000012293) Snta1 (ENSJJAG00000020267) #22 ENSJJAG00000016210 Bpifb5 (ENSJJAG00000016027) ##24 Bpifb1 (ENSJJAG00000023259) #24 ENSJJAG00000022519 #25 Bpifa3 (ENSJJAG00000012935) #26 Bpifb4 (ENSJJAG00000019678) #28 ENSJJAG00000019744 #30 Bpifb2 (ENSJJAG00000017859) #31 Sun5 (ENSJJAG00000021388) #32 Mapre1 (ENSJJAG00000018249) ENSJJAG00000000621 Commd7 (ENSJJAG00000010654) ENSJJAG00000000449 ENSJJAG00000021569 Kif3b (ENSJJAG00000019431) Muroidea ANCESTRAL SPECIES 7 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.y.b ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a Chinese hamster chok1gshd MODERN SPECIES 188 Dynlrb1 (ENSCGRG00001013277) Itch (ENSCGRG00001020207) ENSCGRG00001012673 a (ENSCGRG00001021768) ENSCGRG00001004778 ENSCGRG00001001614 Raly (ENSCGRG00001014652) Chmp4b (ENSCGRG00001000652) Zfp341 (ENSCGRG00001014101) Pxmp4 (ENSCGRG00001010342) E2f1 (ENSCGRG00001001729) Necab3 (ENSCGRG00001013760) Actl10 (ENSCGRG00001006945) 1700003F12Rik (ENSCGRG00001012971) Cbfa2t2 (ENSCGRG00001014529) Snta1 (ENSCGRG00001016422) #22 Cdk5rap1 (ENSCGRG00001020687) #23 ENSCGRG00001018519 ENSCGRG00001021876 Bpifb5 (ENSCGRG00001022241) ##24 Bpifb1 (ENSCGRG00001022649) #24 Bpifa5 (ENSCGRG00001018207) #25 Bpifa1 (ENSCGRG00001014265) #25 Bpifa3 (ENSCGRG00001017514) #26 Bpifa2 (ENSCGRG00001020519) #27 Bpifa6 (ENSCGRG00001023934) Bpifb4 (ENSCGRG00001014345) #28 Bpifb3 (ENSCGRG00001020775) #29 Bpifb6 (ENSCGRG00001023599) #30 Bpifb2 (ENSCGRG00001009296) #31 Sun5 (ENSCGRG00001017538) #32 Golden Hamster MODERN SPECIES 791 Trp53inp2 (ENSMAUG00000004915) Pigu (ENSMAUG00000012275) Dynlrb1 (ENSMAUG00000019405) Itch (ENSMAUG00000001009) ENSMAUG00000006591 a (ENSMAUG00000021663) ENSMAUG00000009771 Raly (ENSMAUG00000005739) Chmp4b (ENSMAUG00000020158) Zfp341 (ENSMAUG00000011481) Pxmp4 (ENSMAUG00000015504) E2f1 (ENSMAUG00000000913) Necab3 (ENSMAUG00000015672) 1700003F12Rik (ENSMAUG00000022072) Cbfa2t2 (ENSMAUG00000001412) Snta1 (ENSMAUG00000013984) #22 Cdk5rap1 (ENSMAUG00000000980) #23 Bpifb5 (ENSMAUG00000008139) ##24 Bpifb1 (ENSMAUG00000011247) #24 Bpifa5 (ENSMAUG00000012713) #25 Bpifa1 (ENSMAUG00000014646) #25 Bpifa3 (ENSMAUG00000013387) #26 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 Northern American deer mouse MODERN SPECIES 17 Dynlrb1 (ENSPEMG00000001641) Itch (ENSPEMG00000021623) ENSPEMG00000024071 a (ENSPEMG00000023599) Eif2s2 (ENSPEMG00000023172) Raly (ENSPEMG00000021466) Chmp4b (ENSPEMG00000021658) Zfp341 (ENSPEMG00000022506) Pxmp4 (ENSPEMG00000023523) E2f1 (ENSPEMG00000018049) Actl10 (ENSPEMG00000026578) 1700003F12Rik (ENSPEMG00000031171) Necab3 (ENSPEMG00000011260) Cbfa2t2 (ENSPEMG00000023470) ENSPEMG00000030394 Snta1 (ENSPEMG00000003510) #22 Cdk5rap1 (ENSPEMG00000017045) #23 ENSPEMG00000011960 Bpifb5 (ENSPEMG00000007792) ##24 Bpifb1 (ENSPEMG00000018971) #24 Bpifa5 (ENSPEMG00000011773) #25 Bpifa1 (ENSPEMG00000014511) #25 Bpifa3 (ENSPEMG00000008523) #26 ENSPEMG00000028840 ENSPEMG00000027075 Bpifa2 (ENSPEMG00000015949) #27 Bpifa6 (ENSPEMG00000016037) Bpifb4 (ENSPEMG00000008153) #28 Bpifb3 (ENSPEMG00000016514) #29 Bpifb6 (ENSPEMG00000009388) #30 Bpifb2 (ENSPEMG00000001773) #31 Prairie vole MODERN SPECIES 357 Map1lc3a (ENSMOCG00000022232) Dynlrb1 (ENSMOCG00000001553) Itch (ENSMOCG00000015148) ENSMOCG00000021599 a (ENSMOCG00000006735) Eif2s2 (ENSMOCG00000012809) Raly (ENSMOCG00000009450) ENSMOCG00000017228 Chmp4b (ENSMOCG00000022208) Zfp341 (ENSMOCG00000004075) Pxmp4 (ENSMOCG00000003745) E2f1 (ENSMOCG00000012464) Necab3 (ENSMOCG00000000497) 1700003F12Rik (ENSMOCG00000019597) Cbfa2t2 (ENSMOCG00000015541) Snta1 (ENSMOCG00000005630) #22 Cdk5rap1 (ENSMOCG00000002846) #23 Bpifb5 (ENSMOCG00000002643) ##24 Bpifb1 (ENSMOCG00000011657) #24 Bpifa5 (ENSMOCG00000015053) #25 Bpifa1 (ENSMOCG00000022067) #25 Bpifa3 (ENSMOCG00000007021) #26 Bpifa2 (ENSMOCG00000020017) #27 Bpifa6 (ENSMOCG00000013390) Nsfl1c (ENSMOCG00000002492) Fkbp1a (ENSMOCG00000015631) Sdcbp2 (ENSMOCG00000018189) Snph (ENSMOCG00000019255) Rad21l (ENSMOCG00000001417) Tmem74b (ENSMOCG00000012931) Psmf1 (ENSMOCG00000017241) Murinae ANCESTRAL SPECIES 1 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 Mus ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Mus_A ANCESTRAL SPECIES ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Mus_B ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Mus_C ANCESTRAL SPECIES ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a.d #25 ENSGT01100000263546.d.b.a.a.a.a.c #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a Steppe mouse MODERN SPECIES 27 ENSMSIG00000001894 a (ENSMSIG00000001870) Eif2s2 (ENSMSIG00000001803) Raly (ENSMSIG00000001654) ENSMSIG00000001612 Chmp4b (ENSMSIG00000001595) Zfp341 (ENSMSIG00000001480) ENSMSIG00000001473 Pxmp4 (ENSMSIG00000001438) E2f1 (ENSMSIG00000001395) Actl10 (ENSMSIG00000001387) 1700003F12Rik (ENSMSIG00000001368) Necab3 (ENSMSIG00000001205) Cbfa2t2 (ENSMSIG00000001148) ENSMSIG00000001135 Snta1 (ENSMSIG00000001125) #22 Cdk5rap1 (ENSMSIG00000001010) #23 spretus MODERN SPECIES 11 Itch (MGP_SPRETEiJ_G0025445) MGP_SPRETEiJ_G0025444 Eif2s2 (MGP_SPRETEiJ_G0025443) a (MGP_SPRETEiJ_G0025442) Raly (MGP_SPRETEiJ_G0025441) MGP_SPRETEiJ_G0025440 Chmp4b (MGP_SPRETEiJ_G0025439) MGP_SPRETEiJ_G0025438 MGP_SPRETEiJ_G0025437 Pxmp4 (MGP_SPRETEiJ_G0025436) E2f1 (MGP_SPRETEiJ_G0025435) Actl10 (MGP_SPRETEiJ_G0025434) 1700003F12Rik (MGP_SPRETEiJ_G0025433) Necab3 (MGP_SPRETEiJ_G0025432) Cbfa2t2 (MGP_SPRETEiJ_G0025431) Snta1 (MGP_SPRETEiJ_G0025430) #22 Cdk5rap1 (MGP_SPRETEiJ_G0025429) #23 MGP_SPRETEiJ_G0025428 MGP_SPRETEiJ_G0025427 Bpifb5 (MGP_SPRETEiJ_G0025426) ##24 Bpifb1 (MGP_SPRETEiJ_G0025425) #24 Bpifa5 (MGP_SPRETEiJ_G0025424) #25 Bpifa1 (MGP_SPRETEiJ_G0025423) #25 Bpifa3 (MGP_SPRETEiJ_G0025422) #26 Bpifa2 (MGP_SPRETEiJ_G0025421) #27 Bpifa6 (MGP_SPRETEiJ_G0025420) MGP_SPRETEiJ_G0025419 #28 Bpifb3 (MGP_SPRETEiJ_G0025418) #29 Bpifb6 (MGP_SPRETEiJ_G0025417) #30 Bpifb2 (MGP_SPRETEiJ_G0025416) #31 Sun5 (MGP_SPRETEiJ_G0025415) #32 Mouse MODERN SPECIES 11 Map1lc3a (ENSMUSG00000027602) Dynlrb1 (ENSMUSG00000047459) Itch (ENSMUSG00000027598) Ahcy (ENSMUSG00000027597) Eif2s2 (ENSMUSG00000074656) a (ENSMUSG00000027596) Raly (ENSMUSG00000027593) Chmp4b (ENSMUSG00000038467) Zfp341 (ENSMUSG00000059842) Pxmp4 (ENSMUSG00000000876) E2f1 (ENSMUSG00000027490) Actl10 (ENSMUSG00000078129) 1700003F12Rik (ENSMUSG00000038523) Necab3 (ENSMUSG00000027489) Cbfa2t2 (ENSMUSG00000038533) Snta1 (ENSMUSG00000027488) #22 Cdk5rap1 (ENSMUSG00000027487) #23 Bpifb9b (ENSMUSG00000067996) Bpifb9a (ENSMUSG00000067998) Bpifb5 (ENSMUSG00000038572) ##24 Bpifb1 (ENSMUSG00000027485) #24 Bpifa5 (ENSMUSG00000027484) #25 Bpifa1 (ENSMUSG00000027483) #25 Bpifa3 (ENSMUSG00000027482) #26 Bpifa2 (ENSMUSG00000042459) #27 Bpifa6 (ENSMUSG00000078998) Bpifb4 (ENSMUSG00000074665) #28 Bpifb3 (ENSMUSG00000068008) #29 Bpifb6 (ENSMUSG00000068009) #30 Bpifb2 (ENSMUSG00000027481) #31 Sun5 (ENSMUSG00000027480) #32 Ryukyu mouse MODERN SPECIES 11 Itch (MGP_CAROLIEiJ_G0024523) MGP_CAROLIEiJ_G0024522 Eif2s2 (MGP_CAROLIEiJ_G0024521) a (MGP_CAROLIEiJ_G0024520) Raly (MGP_CAROLIEiJ_G0024519) MGP_CAROLIEiJ_G0024518 Chmp4b (MGP_CAROLIEiJ_G0024517) Zfp341 (MGP_CAROLIEiJ_G0024516) MGP_CAROLIEiJ_G0024515 Pxmp4 (MGP_CAROLIEiJ_G0024514) E2f1 (MGP_CAROLIEiJ_G0024513) Actl10 (MGP_CAROLIEiJ_G0024512) 1700003F12Rik (MGP_CAROLIEiJ_G0024511) Necab3 (MGP_CAROLIEiJ_G0024510) Cbfa2t2 (MGP_CAROLIEiJ_G0024509) Snta1 (MGP_CAROLIEiJ_G0024508) #22 MGP_CAROLIEiJ_G0024507 #23 Bpifb5 (MGP_CAROLIEiJ_G0024505) ##24 Bpifb1 (MGP_CAROLIEiJ_G0024504) #24 Bpifa5 (MGP_CAROLIEiJ_G0024503) #25 Bpifa1 (MGP_CAROLIEiJ_G0024502) #25 Bpifa3 (MGP_CAROLIEiJ_G0024501) #26 Bpifa2 (MGP_CAROLIEiJ_G0024500) #27 Bpifa6 (MGP_CAROLIEiJ_G0024499) MGP_CAROLIEiJ_G0024498 #28 Bpifb3 (MGP_CAROLIEiJ_G0024497) #29 MGP_CAROLIEiJ_G0024496 #30 Bpifb2 (MGP_CAROLIEiJ_G0024495) #31 Sun5 (MGP_CAROLIEiJ_G0024494) #32 MGP_CAROLIEiJ_G0024493 Mapre1 (MGP_CAROLIEiJ_G0024492) Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025967 MGP_PahariEiJ_G0025966 Eif2s2 (MGP_PahariEiJ_G0025965) a (MGP_PahariEiJ_G0025964) Raly (MGP_PahariEiJ_G0025963) MGP_PahariEiJ_G0025962 Chmp4b (MGP_PahariEiJ_G0025961) Zfp341 (MGP_PahariEiJ_G0025960) MGP_PahariEiJ_G0025959 Pxmp4 (MGP_PahariEiJ_G0025958) E2f1 (MGP_PahariEiJ_G0025957) Actl10 (MGP_PahariEiJ_G0025956) 1700003F12Rik (MGP_PahariEiJ_G0025955) Necab3 (MGP_PahariEiJ_G0025954) Cbfa2t2 (MGP_PahariEiJ_G0025953) Snta1 (MGP_PahariEiJ_G0025952) #22 Cdk5rap1 (MGP_PahariEiJ_G0025951) #23 Bpifb5 (MGP_PahariEiJ_G0025949) ##24 Bpifb1 (MGP_PahariEiJ_G0025948) #24 Bpifa5 (MGP_PahariEiJ_G0025947) #25 Bpifa1 (MGP_PahariEiJ_G0025946) #25 Bpifa3 (MGP_PahariEiJ_G0025945) #26 MGP_PahariEiJ_G0025944 MGP_PahariEiJ_G0025943 #27 Bpifa6 (MGP_PahariEiJ_G0025942) MGP_PahariEiJ_G0025941 #28 Bpifb3 (MGP_PahariEiJ_G0025940) #29 Bpifb6 (MGP_PahariEiJ_G0025939) #30 Bpifb2 (MGP_PahariEiJ_G0025938) #31 Sun5 (MGP_PahariEiJ_G0025937) #32 MGP_PahariEiJ_G0025936 Rat MODERN SPECIES 13 Asip (ENSRNOG00000017701) Eif2s2 (ENSRNOG00000017447) Raly (ENSRNOG00000017405) LOC690597 (ENSRNOG00000055182) Chmp4b (ENSRNOG00000046585) AABR07054368.1 (ENSRNOG00000029996) ENSRNOG00000063087 Zfp341 (ENSRNOG00000017086) Pxmp4 (ENSRNOG00000016975) Actl10 (ENSRNOG00000036864) RGD1561517 (ENSRNOG00000016583) E2f1 (ENSRNOG00000016708) AABR07054362.1 (ENSRNOG00000050899) Sms-ps2 (ENSRNOG00000031275) Cbfa2t2 (ENSRNOG00000016352) Snta1 (ENSRNOG00000016062) #22 ENSRNOG00000064935 #23 LOC690507 (ENSRNOG00000015637) Bpifb5 (ENSRNOG00000025238) ##24 Bpifb1 (ENSRNOG00000015468) #24 Bpifa5 (ENSRNOG00000013908) #25 Bpifa1 (ENSRNOG00000013859) #25 Bpifa3 (ENSRNOG00000013778) #26 Bpifa2f (ENSRNOG00000036870) Bpifa2 (ENSRNOG00000013540) #27 Bpifa6 (ENSRNOG00000043258) Bpifb3 (ENSRNOG00000034174) #28 Bpifb6 (ENSRNOG00000013371) #30 Bpifb2 (ENSRNOG00000012197) #31 Sun5 (ENSRNOG00000027221) #32 Efcab8 (ENSRNOG00000070431) Upper Galilee mountains blind mole rat MODERN SPECIES 1287 Snta1 (ENSNGAG00000014553) #22 Cdk5rap1 (ENSNGAG00000016976) #23 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Suina ANCESTRAL SPECIES 9 ENSGT00530000063829.C ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 Chacoan peccary MODERN SPECIES 801 MAP1LC3A (ENSCWAG00000006108) DYNLRB1 (ENSCWAG00000006128) ITCH (ENSCWAG00000006169) AHCY (ENSCWAG00000006316) ASIP (ENSCWAG00000006347) EIF2S2 (ENSCWAG00000006369) RALY (ENSCWAG00000006424) ENSCWAG00000006485 ZNF341 (ENSCWAG00000006507) PXMP4 (ENSCWAG00000006623) E2F1 (ENSCWAG00000006652) NECAB3 (ENSCWAG00000006683) ACTL10 (ENSCWAG00000006716) ENSCWAG00000006723 CBFA2T2 (ENSCWAG00000006761) SNTA1 (ENSCWAG00000006848) #22 CDK5RAP1 (ENSCWAG00000006898) #23 ENSCWAG00000006962 ENSCWAG00000007007 BPIFB1 (ENSCWAG00000007056) #24 BPIFA1 (ENSCWAG00000007132) #25 ENSCWAG00000007185 #26 BPIFA2 (ENSCWAG00000007236) #27 BPIFB4 (ENSCWAG00000007278) #28 BPIFB3 (ENSCWAG00000007348) #29 BPIFB6 (ENSCWAG00000007416) #30 BPIFB2 (ENSCWAG00000007471) #31 SUN5 (ENSCWAG00000007557) #32 ENSCWAG00000007672 MAPRE1 (ENSCWAG00000007693) DNMT3B (ENSCWAG00000007767) Pig MODERN SPECIES 8 ENSSSCG00000043574 ITCH (ENSSSCG00000007280) AHCY (ENSSSCG00000007278) ASIP (ENSSSCG00000053652) EIF2S2 (ENSSSCG00000026617) RALY (ENSSSCG00000007275) CHMP4B (ENSSSCG00000007272) ZNF341 (ENSSSCG00000021769) ENSSSCG00000034625 E2F1 (ENSSSCG00000007268) ACTL10 (ENSSSCG00000044750) ENSSSCG00000047940 NECAB3 (ENSSSCG00000029626) CBFA2T2 (ENSSSCG00000027410) ENSSSCG00000034263 SNTA1 (ENSSSCG00000063004) #22 CDK5RAP1 (ENSSSCG00000007264) #23 ENSSSCG00000007263 ENSSSCG00000007262 ##24 BPIFB1 (ENSSSCG00000007261) #24 BPIFA1 (ENSSSCG00000007260) #25 BPIFA3 (ENSSSCG00000024787) #26 BPIFA2 (ENSSSCG00000007259) #27 BPIFB4 (ENSSSCG00000029295) #28 BPIFB3 (ENSSSCG00000026137) #29 BPIFB6 (ENSSSCG00000025052) #30 BPIFB2 (ENSSSCG00000029714) #31 SUN5 (ENSSSCG00000007256) #32 ENSSSCG00000059506 MAPRE1 (ENSSSCG00000007253) DNMT3B (ENSSSCG00000007252) Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Cetacea ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb ENSGT01100000263546.e.a.b #29 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Dolphin MODERN SPECIES 278 SNTA1 (ENSTTRG00000010869) #22 CDK5RAP1 (ENSTTRG00000010868) #23 ENSTTRG00000010866 BPIFB1 (ENSTTRG00000010865) #24 BPIFA1 (ENSTTRG00000010864) #25 BPIFA3 (ENSTTRG00000010863) #26 ENSTTRG00000010861 #27 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361.a #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Narwhal MODERN SPECIES 299 PIGU (ENSMMNG00015001564) MAP1LC3A (ENSMMNG00015001604) DYNLRB1 (ENSMMNG00015001633) ITCH (ENSMMNG00015001660) AHCY (ENSMMNG00015001713) ENSMMNG00015001751 EIF2S2 (ENSMMNG00015001772) RALY (ENSMMNG00015001794) ENSMMNG00015001817 ZNF341 (ENSMMNG00015001854) PXMP4 (ENSMMNG00015001891) E2F1 (ENSMMNG00015001904) NECAB3 (ENSMMNG00015001933) ENSMMNG00015001984 CBFA2T2 (ENSMMNG00015002029) SNTA1 (ENSMMNG00015002113) #22 CDK5RAP1 (ENSMMNG00015002156) #23 BPIFB1 (ENSMMNG00015002195) #24 BPIFA1 (ENSMMNG00015002245) #25 BPIFA3 (ENSMMNG00015002319) #26 BPIFB4 (ENSMMNG00015002370) #28 SUN5 (ENSMMNG00015002432) #32 ENSMMNG00015002504 ENSMMNG00015002532 DNMT3B (ENSMMNG00015002780) COMMD7 (ENSMMNG00015003283) NOL4L (ENSMMNG00015003321) ASXL1 (ENSMMNG00015003413) KIF3B (ENSMMNG00015003500) POFUT1 (ENSMMNG00015003526) PLAGL2 (ENSMMNG00015003544) Beluga whale MODERN SPECIES 36 MAP1LC3A (ENSDLEG00000018191) DYNLRB1 (ENSDLEG00000018207) ITCH (ENSDLEG00000018226) AHCY (ENSDLEG00000018252) ASIP (ENSDLEG00000018261) EIF2S2 (ENSDLEG00000018274) RALY (ENSDLEG00000018282) CHMP4B (ENSDLEG00000018298) ZNF341 (ENSDLEG00000018304) PXMP4 (ENSDLEG00000018317) E2F1 (ENSDLEG00000018330) NECAB3 (ENSDLEG00000018392) ACTL10 (ENSDLEG00000018420) ENSDLEG00000018425 CBFA2T2 (ENSDLEG00000018440) SNTA1 (ENSDLEG00000018449) #22 ENSDLEG00000018457 #23 ENSDLEG00000018464 #23 ENSDLEG00000018481 #24 BPIFA1 (ENSDLEG00000018496) #25 BPIFA3 (ENSDLEG00000018509) #26 BPIFB4 (ENSDLEG00000018531) #28 ENSDLEG00000018557 DNMT3B (ENSDLEG00000018581) COMMD7 (ENSDLEG00000018629) NOL4L (ENSDLEG00000018639) ASXL1 (ENSDLEG00000018668) KIF3B (ENSDLEG00000018749) POFUT1 (ENSDLEG00000018766) PLAGL2 (ENSDLEG00000018773) ENSDLEG00000018777 Vaquita MODERN SPECIES 6 TP53INP2 (ENSPSNG00000012935) PIGU (ENSPSNG00000012993) MAP1LC3A (ENSPSNG00000013092) ITCH (ENSPSNG00000013334) ENSPSNG00000014022 ASIP (ENSPSNG00000014123) EIF2S2 (ENSPSNG00000014204) RALY (ENSPSNG00000014290) CHMP4B (ENSPSNG00000014408) ZNF341 (ENSPSNG00000014477) PXMP4 (ENSPSNG00000014910) E2F1 (ENSPSNG00000014974) NECAB3 (ENSPSNG00000015043) ENSPSNG00000015208 CBFA2T2 (ENSPSNG00000015283) SNTA1 (ENSPSNG00000015499) #22 CDK5RAP1 (ENSPSNG00000004778) #23 BPIFB1 (ENSPSNG00000004841) #24 BPIFA1 (ENSPSNG00000004902) #25 BPIFA3 (ENSPSNG00000004966) #26 SUN5 (ENSPSNG00000005025) #32 ENSPSNG00000005099 MAPRE1 (ENSPSNG00000005125) DNMT3B (ENSPSNG00000005285) COMMD7 (ENSPSNG00000005578) NOL4L (ENSPSNG00000005632) ASXL1 (ENSPSNG00000005728) KIF3B (ENSPSNG00000005861) POFUT1 (ENSPSNG00000005902) PLAGL2 (ENSPSNG00000005936) ENSPSNG00000005961 Sperm whale MODERN SPECIES 5 ACSS2 (ENSPCTG00005008347) GGT7 (ENSPCTG00005008516) NCOA6 (ENSPCTG00005008566) TP53INP2 (ENSPCTG00005008663) PIGU (ENSPCTG00005008727) ENSPCTG00005009176 MAP1LC3A (ENSPCTG00005009227) ENSPCTG00005009300 ENSPCTG00005009432 ITCH (ENSPCTG00005009484) EIF2S2 (ENSPCTG00005009850) RALY (ENSPCTG00005009899) CHMP4B (ENSPCTG00005009997) ZNF341 (ENSPCTG00005010042) ENSPCTG00005010096 SNTA1 (ENSPCTG00005010299) #22 CDK5RAP1 (ENSPCTG00005010350) #23 BPIFA1 (ENSPCTG00005010475) #25 BPIFA3 (ENSPCTG00005010684) #26 BPIFB3 (ENSPCTG00005010805) #29 SUN5 (ENSPCTG00005011002) #32 ENSPCTG00005011260 MAPRE1 (ENSPCTG00005011307) DNMT3B (ENSPCTG00005011472) COMMD7 (ENSPCTG00005012985) NOL4L (ENSPCTG00005013151) ASXL1 (ENSPCTG00005013333) KIF3B (ENSPCTG00005013787) TM9SF4 (ENSPCTG00005013852) HCK (ENSPCTG00005013922) CCM2L (ENSPCTG00005014508) Blue whale MODERN SPECIES 6 ENSBMSG00010014323 ENSBMSG00010014355 AHCY (ENSBMSG00010014387) ENSBMSG00010014441 EIF2S2 (ENSBMSG00010014478) RALY (ENSBMSG00010014524) ENSBMSG00010014552 ZNF341 (ENSBMSG00010014577) PXMP4 (ENSBMSG00010014607) E2F1 (ENSBMSG00010014642) NECAB3 (ENSBMSG00010014701) ACTL10 (ENSBMSG00010014804) ENSBMSG00010014818 ENSBMSG00010014841 CBFA2T2 (ENSBMSG00010014897) SNTA1 (ENSBMSG00010014974) #22 CDK5RAP1 (ENSBMSG00010015008) #23 BPIFB1 (ENSBMSG00010015057) #24 BPIFA1 (ENSBMSG00010015165) #25 BPIFA3 (ENSBMSG00010015251) #26 BPIFB4 (ENSBMSG00010015330) #28 BPIFB3 (ENSBMSG00010015474) #29 BPIFB6 (ENSBMSG00010015545) #30 BPIFB2 (ENSBMSG00010015628) #31 ENSBMSG00010015685 MAPRE1 (ENSBMSG00010015710) DNMT3B (ENSBMSG00010015879) COMMD7 (ENSBMSG00010016369) ENSBMSG00010016439 NOL4L (ENSBMSG00010016482) ASXL1 (ENSBMSG00010012180) Pecora ANCESTRAL SPECIES 9 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.t ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Yarkand deer MODERN SPECIES 15 DYNLRB1 (ENSCHYG00000022408) ITCH (ENSCHYG00000021902) ENSCHYG00000021816 ASIP (ENSCHYG00000021759) EIF2S2 (ENSCHYG00000021669) RALY (ENSCHYG00000021487) CHMP4B (ENSCHYG00000021413) ZNF341 (ENSCHYG00000021267) PXMP4 (ENSCHYG00000021195) E2F1 (ENSCHYG00000021119) ACTL10 (ENSCHYG00000021085) ENSCHYG00000021007 NECAB3 (ENSCHYG00000020779) ENSCHYG00000020718 CBFA2T2 (ENSCHYG00000020600) SNTA1 (ENSCHYG00000020536) #22 ENSCHYG00000020441 ENSCHYG00000020289 ##24 CDK5RAP1 (ENSCHYG00000019777) #23 BPIFB1 (ENSCHYG00000019627) #24 BPIFA1 (ENSCHYG00000019488) #25 BPIFA3 (ENSCHYG00000019399) #26 ENSCHYG00000019367 ENSCHYG00000019281 #27 ENSCHYG00000019207 #27 ENSCHYG00000019160 BPIFB4 (ENSCHYG00000018989) #28 BPIFB3 (ENSCHYG00000018802) #29 BPIFB6 (ENSCHYG00000018569) #30 BPIFB2 (ENSCHYG00000018354) #31 SUN5 (ENSCHYG00000017917) #32 Percora_a ANCESTRAL SPECIES 10 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.t ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Bovidae ANCESTRAL SPECIES 10 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 Caprinae ANCESTRAL SPECIES 21 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00950000183604.b.b ENSGT00950000183604.b.a ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Goat MODERN SPECIES 4 DYNLRB1 (ENSCHIG00000017947) ITCH (ENSCHIG00000013191) AHCY (ENSCHIG00000026741) ASIP (ENSCHIG00000014323) ENSCHIG00000012008 ENSCHIG00000026317 RALY (ENSCHIG00000026609) CHMP4B (ENSCHIG00000015320) ZNF341 (ENSCHIG00000018677) PXMP4 (ENSCHIG00000019935) E2F1 (ENSCHIG00000015683) ACTL10 (ENSCHIG00000002177) ENSCHIG00000024263 NECAB3 (ENSCHIG00000024415) ENSCHIG00000017263 SNTA1 (ENSCHIG00000026424) #22 CDK5RAP1 (ENSCHIG00000026048) #23 ENSCHIG00000006775 ##24 BPIFB1 (ENSCHIG00000017212) #24 BPIFA1 (ENSCHIG00000024834) #25 BPIFA3 (ENSCHIG00000019106) #26 ENSCHIG00000021482 #27 ENSCHIG00000023902 ENSCHIG00000014390 #27 ENSCHIG00000021281 ENSCHIG00000001593 ENSCHIG00000009057 BPIFB4 (ENSCHIG00000015953) #28 BPIFB3 (ENSCHIG00000023551) #29 BPIFB6 (ENSCHIG00000019460) #30 BPIFB2 (ENSCHIG00000026759) #31 Rambouillet Sheep MODERN SPECIES 4 PIGU (ENSOARG00020013640) MAP1LC3A (ENSOARG00020013584) DYNLRB1 (ENSOARG00020013544) ITCH (ENSOARG00020013255) AHCY (ENSOARG00020012830) ENSOARG00020012697 RALY (ENSOARG00020012493) CHMP4B (ENSOARG00020012426) ZNF341 (ENSOARG00020012178) PXMP4 (ENSOARG00020012090) E2F1 (ENSOARG00020011997) ENSOARG00020011959 NECAB3 (ENSOARG00020011215) ENSOARG00020011066 ENSOARG00020011013 SNTA1 (ENSOARG00020010934) #22 CDK5RAP1 (ENSOARG00020010445) #23 ENSOARG00020010310 ##24 BPIFA1 (ENSOARG00020009831) #25 BPIFA3 (ENSOARG00020009757) #26 ENSOARG00020009734 #27 ENSOARG00020009694 ENSOARG00020009657 ENSOARG00020009595 ENSOARG00020009537 #27 ENSOARG00020009477 #27 BPIFB4 (ENSOARG00020009376) #28 BPIFB3 (ENSOARG00020009266) #29 BPIFB6 (ENSOARG00020009171) #30 SUN5 (ENSOARG00020008881) #32 EFCAB8 (ENSOARG00020008596) Bovinae ANCESTRAL SPECIES 23 ENSGT00940000157014.a ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.t ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 Bos ANCESTRAL SPECIES 24 ENSGT00940000157014.a ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.t ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 Bos_a ANCESTRAL SPECIES 7 ENSGT00390000011067.A ENSGT00940000157014.a ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT00940000170884 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 Domestic yak MODERN SPECIES 3 ASIP (ENSBGRG00000006937) ENSBGRG00000006899 ENSBGRG00000006852 RALY (ENSBGRG00000006728) ENSBGRG00000006672 ZNF341 (ENSBGRG00000006484) ENSBGRG00000006426 E2F1 (ENSBGRG00000006368) ACTL10 (ENSBGRG00000006349) C20orf144 (ENSBGRG00000006314) NECAB3 (ENSBGRG00000006194) ENSBGRG00000006176 ENSBGRG00000006170 ENSBGRG00000006162 CBFA2T2 (ENSBGRG00000006122) SNTA1 (ENSBGRG00000006075) #22 ENSBGRG00000006020 CDK5RAP1 (ENSBGRG00000005894) #23 ENSBGRG00000005792 BPIFB1 (ENSBGRG00000005686) #24 BPIFA1 (ENSBGRG00000005622) #25 BPIFA3 (ENSBGRG00000005582) #26 ENSBGRG00000005555 #27 ENSBGRG00000005545 ENSBGRG00000005491 #27 ENSBGRG00000005469 #27 ENSBGRG00000005450 BPIFB4 (ENSBGRG00000005415) #28 BPIFB3 (ENSBGRG00000005308) #29 BPIFB6 (ENSBGRG00000005172) #30 BPIFB2 (ENSBGRG00000005124) #31 Wild yak MODERN SPECIES 860 ENSBMUG00000024806 ZNF341 (ENSBMUG00000024798) ENSBMUG00000024790 E2F1 (ENSBMUG00000024777) ACTL10 (ENSBMUG00000024774) NECAB3 (ENSBMUG00000024769) ENSBMUG00000024759 SNTA1 (ENSBMUG00000024747) #22 CDK5RAP1 (ENSBMUG00000024744) #23 ENSBMUG00000024718 ENSBMUG00000024715 BPIFB1 (ENSBMUG00000024706) #24 BPIFA1 (ENSBMUG00000024703) #25 BPIFA3 (ENSBMUG00000024694) #26 ENSBMUG00000024685 ENSBMUG00000024667 #27 ENSBMUG00000024661 TENT4A (ENSBMUG00000024650) SRD5A1 (ENSBMUG00000024628) NSUN2 (ENSBMUG00000024440) UBE2QL1 (ENSBMUG00000024147) ENSBMUG00000024143 ENSBMUG00000024138 Bos_b ANCESTRAL SPECIES 26 ENSGT00940000157014.a ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a.b #27 ENSGT01100000263546.d.b.a.b.a.a.a #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 Cow MODERN SPECIES 4 ITCH (ENSBTAG00000000308) ENSBTAG00000046623 AHCY (ENSBTAG00000018101) ASIP (ENSBTAG00000034077) EIF2S2 (ENSBTAG00000005969) RALY (ENSBTAG00000016524) CHMP4B (ENSBTAG00000013387) ZNF341 (ENSBTAG00000039313) PXMP4 (ENSBTAG00000038738) E2F1 (ENSBTAG00000003971) C13H20orf144 (ENSBTAG00000003962) NECAB3 (ENSBTAG00000003946) ENSBTAG00000053797 ENSBTAG00000053051 ENSBTAG00000010131 SNTA1 (ENSBTAG00000000512) #22 ENSBTAG00000031354 CDK5RAP1 (ENSBTAG00000018535) #23 BPIFB5 (ENSBTAG00000031361) ##24 BPIFB1 (ENSBTAG00000015724) #24 BPIFA1 (ENSBTAG00000017098) #25 BPIFA3 (ENSBTAG00000006802) #26 ENSBTAG00000031373 BPIFA2B (ENSBTAG00000019752) #27 ENSBTAG00000011704 BPIFA2C (ENSBTAG00000031376) #27 ENSBTAG00000031375 #27 BPIFA2A (ENSBTAG00000009144) #27 BPIFB4 (ENSBTAG00000038412) #28 BPIFB3 (ENSBTAG00000038687) #29 BPIFB6 (ENSBTAG00000010112) #30 Hybrid Bos Indicus MODERN SPECIES 4 ENSBIXG00005028582 AHCY (ENSBIXG00005028542) ASIP (ENSBIXG00005004914) EIF2S2 (ENSBIXG00005006636) RALY (ENSBIXG00005028479) ENSBIXG00005004879 ZNF341 (ENSBIXG00005028356) ENSBIXG00005028326 E2F1 (ENSBIXG00005028294) NECAB3 (ENSBIXG00005028280) ACTL10 (ENSBIXG00005028235) ENSBIXG00005028229 ENSBIXG00005004852 ENSBIXG00005028172 ENSBIXG00005004838 SNTA1 (ENSBIXG00005028108) #22 CDK5RAP1 (ENSBIXG00005028076) #23 ENSBIXG00005027971 ENSBIXG00005027937 ##24 BPIFB1 (ENSBIXG00005027890) #24 ENSBIXG00005027873 BPIFA1 (ENSBIXG00005027857) #25 BPIFA3 (ENSBIXG00005027808) #26 ENSBIXG00005005327 #27 ENSBIXG00005027704 ENSBIXG00005027683 #27 ENSBIXG00005027671 #27 BPIFB4 (ENSBIXG00005027645) #28 BPIFB3 (ENSBIXG00005027593) #29 BPIFB6 (ENSBIXG00005027534) #30 BPIFB2 (ENSBIXG00005027458) #31 American bison MODERN SPECIES 3266 ENSBBBG00000008776 ENSBBBG00000007314 AHCY (ENSBBBG00000018017) ASIP (ENSBBBG00000018031) EIF2S2 (ENSBBBG00000004436) RALY (ENSBBBG00000004441) CHMP4B (ENSBBBG00000004443) ZNF341 (ENSBBBG00000018116) ENSBBBG00000004455 E2F1 (ENSBBBG00000008832) ACTL10 (ENSBBBG00000018177) ENSBBBG00000004464 NECAB3 (ENSBBBG00000018216) ENSBBBG00000018224 ENSBBBG00000018285 SNTA1 (ENSBBBG00000018296) #22 CDK5RAP1 (ENSBBBG00000018377) #23 ENSBBBG00000009135 BPIFB1 (ENSBBBG00000018409) #24 BPIFA1 (ENSBBBG00000018424) #25 BPIFA3 (ENSBBBG00000004515) #26 ENSBBBG00000018447 ENSBBBG00000018462 #27 ENSBBBG00000004535 ENSBBBG00000004542 ENSBBBG00000018490 #27 ENSBBBG00000018502 #27 ENSBBBG00000018505 Siberian musk deer MODERN SPECIES 1198 DYNLRB1 (ENSMMSG00000011749) ITCH (ENSMMSG00000011807) AHCY (ENSMMSG00000011983) ASIP (ENSMMSG00000012026) EIF2S2 (ENSMMSG00000012063) RALY (ENSMMSG00000012103) CHMP4B (ENSMMSG00000012164) ZNF341 (ENSMMSG00000012195) PXMP4 (ENSMMSG00000012229) E2F1 (ENSMMSG00000012256) NECAB3 (ENSMMSG00000012299) ACTL10 (ENSMMSG00000012331) ENSMMSG00000012346 ENSMMSG00000012366 CBFA2T2 (ENSMMSG00000012397) SNTA1 (ENSMMSG00000012500) #22 CDK5RAP1 (ENSMMSG00000012553) #23 ENSMMSG00000012657 ENSMMSG00000012706 ##24 BPIFB1 (ENSMMSG00000012771) #24 BPIFA1 (ENSMMSG00000012839) #25 BPIFA3 (ENSMMSG00000012875) #26 ENSMMSG00000012907 #27 ENSMMSG00000012944 Camelidae ANCESTRAL SPECIES 10 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.h ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000167979 ENSGT00940000167211 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Arabian camel MODERN SPECIES 10 ENSCDRG00005012808 DYNLRB1 (ENSCDRG00005012749) ITCH (ENSCDRG00005012516) AHCY (ENSCDRG00005012422) ASIP (ENSCDRG00005012368) EIF2S2 (ENSCDRG00005012288) ENSCDRG00005012122 ENSCDRG00005012091 CHMP4B (ENSCDRG00005012040) ZNF341 (ENSCDRG00005011605) PXMP4 (ENSCDRG00005011563) ACTL10 (ENSCDRG00005011389) C20orf144 (ENSCDRG00005011343) NECAB3 (ENSCDRG00005011220) CBFA2T2 (ENSCDRG00005011021) SNTA1 (ENSCDRG00005010910) #22 CDK5RAP1 (ENSCDRG00005010755) #23 ENSCDRG00005010639 ##24 ENSCDRG00005010439 #24 BPIFA1 (ENSCDRG00005010253) #25 BPIFA3 (ENSCDRG00005010065) #26 ENSCDRG00005009985 #27 BPIFB4 (ENSCDRG00005009777) #28 BPIFB3 (ENSCDRG00005009566) #29 BPIFB6 (ENSCDRG00005009313) #30 BPIFB2 (ENSCDRG00005009158) #31 SUN5 (ENSCDRG00005008823) #32 EFCAB8 (ENSCDRG00005019793) MAPRE1 (ENSCDRG00005019775) DNMT3B (ENSCDRG00005017779) COMMD7 (ENSCDRG00005017575) Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.pb Carnivora ANCESTRAL SPECIES 20 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Caniformia ANCESTRAL SPECIES ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Caniformia_b ANCESTRAL SPECIES ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.ob.b Mustelinae ANCESTRAL SPECIES 11 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000007560.q.a.d ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb Ferret MODERN SPECIES 180 PIGU (ENSMPUG00000017813) MAP1LC3A (ENSMPUG00000017814) DYNLRB1 (ENSMPUG00000017815) ITCH (ENSMPUG00000017816) AHCY (ENSMPUG00000017817) ASIP (ENSMPUG00000017818) EIF2S2 (ENSMPUG00000017819) RALY (ENSMPUG00000017820) CHMP4B (ENSMPUG00000017821) ZNF341 (ENSMPUG00000017822) PXMP4 (ENSMPUG00000017823) E2F1 (ENSMPUG00000017824) NECAB3 (ENSMPUG00000017825) ENSMPUG00000017829 CBFA2T2 (ENSMPUG00000017831) SNTA1 (ENSMPUG00000017832) #22 ENSMPUG00000017835 #23 ENSMPUG00000017836 #23 ENSMPUG00000017837 #23 ENSMPUG00000017838 ENSMPUG00000017839 BPIFB1 (ENSMPUG00000017841) #24 BPIFA1 (ENSMPUG00000017848) #25 BPIFA3 (ENSMPUG00000017855) #26 ENSMPUG00000017856 #27 ENSMPUG00000017857 BPIFB4 (ENSMPUG00000017858) #28 ENSMPUG00000017860 BPIFB3 (ENSMPUG00000017861) #29 ENSMPUG00000017862 BPIFB2 (ENSMPUG00000017863) #31 American mink MODERN SPECIES 17 MAP1LC3A (ENSNVIG00000017515) ENSNVIG00000017524 ITCH (ENSNVIG00000017551) AHCY (ENSNVIG00000017607) ASIP (ENSNVIG00000017624) EIF2S2 (ENSNVIG00000017647) RALY (ENSNVIG00000017666) CHMP4B (ENSNVIG00000017728) ZNF341 (ENSNVIG00000017752) PXMP4 (ENSNVIG00000017800) E2F1 (ENSNVIG00000017832) NECAB3 (ENSNVIG00000017859) ACTL10 (ENSNVIG00000017892) ENSNVIG00000017895 CBFA2T2 (ENSNVIG00000017905) SNTA1 (ENSNVIG00000017966) #22 CDK5RAP1 (ENSNVIG00000017990) #23 ENSNVIG00000018027 ##24 BPIFB1 (ENSNVIG00000018051) #24 BPIFA1 (ENSNVIG00000018087) #25 BPIFA3 (ENSNVIG00000018144) #26 ENSNVIG00000018194 BPIFB4 (ENSNVIG00000018205) #28 BPIFB3 (ENSNVIG00000018227) #29 BPIFB6 (ENSNVIG00000018242) #30 BPIFB2 (ENSNVIG00000018261) #31 SUN5 (ENSNVIG00000018291) #32 ENSNVIG00000018321 ENSNVIG00000018325 MAPRE1 (ENSNVIG00000018328) DNMT3B (ENSNVIG00000018344) Ursidae ANCESTRAL SPECIES 14 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.b ENSGT00940000157601 ENSGT00940000154663.j ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000170884 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.ob.b Giant Panda MODERN SPECIES 4 PIGU (ENSAMEG00000009187) MAP1LC3A (ENSAMEG00000009183) ENSAMEG00000009179 ITCH (ENSAMEG00000009134) AHCY (ENSAMEG00000009105) ASIP (ENSAMEG00000009091) EIF2S2 (ENSAMEG00000009071) RALY (ENSAMEG00000009050) CHMP4B (ENSAMEG00000009038) ZNF341 (ENSAMEG00000009012) ENSAMEG00000009004 ENSAMEG00000008958 ACTL10 (ENSAMEG00000008990) ENSAMEG00000019179 CBFA2T2 (ENSAMEG00000008925) SNTA1 (ENSAMEG00000012992) #22 CDK5RAP1 (ENSAMEG00000013021) #23 ENSAMEG00000013060 BPIFB1 (ENSAMEG00000013065) #24 BPIFA1 (ENSAMEG00000013090) #25 BPIFA3 (ENSAMEG00000013101) #26 ENSAMEG00000013108 ENSAMEG00000013119 #27 BPIFB4 (ENSAMEG00000013134) #28 BPIFB3 (ENSAMEG00000013151) #29 BPIFB6 (ENSAMEG00000013170) #30 BPIFB2 (ENSAMEG00000013181) #31 SUN5 (ENSAMEG00000013221) #32 ENSAMEG00000024835 MAPRE1 (ENSAMEG00000013238) DNMT3B (ENSAMEG00000013257) Canidae ANCESTRAL SPECIES 19 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.d.a ##24 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00940000157014 ENSGT00390000017515.o.a ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00940000154661.a.a ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.d.a ##24 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 Dingo MODERN SPECIES 343 ITCH (ENSCAFG00020005109) ENSCAFG00020005093 ASIP (ENSCAFG00020005092) EIF2S2 (ENSCAFG00020005078) RALY (ENSCAFG00020005069) ENSCAFG00020005046 CHMP4B (ENSCAFG00020005042) ZNF341 (ENSCAFG00020004998) ENSCAFG00020004983 PXMP4 (ENSCAFG00020004976) E2F1 (ENSCAFG00020004968) ACTL10 (ENSCAFG00020004965) ENSCAFG00020004963 NECAB3 (ENSCAFG00020004926) CBFA2T2 (ENSCAFG00020004923) SNTA1 (ENSCAFG00020004908) #22 CDK5RAP1 (ENSCAFG00020004901) #23 ENSCAFG00020004889 ##24 BPIFB1 (ENSCAFG00020004882) #24 BPIFA1 (ENSCAFG00020004859) #25 BPIFA3 (ENSCAFG00020004853) #26 ENSCAFG00020004846 ENSCAFG00020004841 #27 BPIFB4 (ENSCAFG00020004810) #28 BPIFB3 (ENSCAFG00020004800) #29 BPIFB6 (ENSCAFG00020004797) #30 BPIFB2 (ENSCAFG00020004786) #31 SUN5 (ENSCAFG00020004779) #32 EFCAB8 (ENSCAFG00020004774) ENSCAFG00020004771 DNMT3B (ENSCAFG00020004474) Dog MODERN SPECIES 16 DYNLRB1 (ENSCAFG00845016154) ITCH (ENSCAFG00845015881) ENSCAFG00845015788 ENSCAFG00845015756 ASIP (ENSCAFG00845015715) EIF2S2 (ENSCAFG00845025914) RALY (ENSCAFG00845025648) CHMP4B (ENSCAFG00845025558) ZNF341 (ENSCAFG00845025407) TIMM8A (ENSCAFG00845025368) E2F1 (ENSCAFG00845025182) ENSCAFG00845025127 ENSCAFG00845025080 NECAB3 (ENSCAFG00845024784) CBFA2T2 (ENSCAFG00845024493) CDK5RAP1 (ENSCAFG00845024407) #22 CDK5RAP1 (ENSCAFG00845024161) #23 ENSCAFG00845024074 ENSCAFG00845024007 ##24 BPIFB1 (ENSCAFG00845023875) #24 BPIFA1 (ENSCAFG00845023690) #25 BPIFA3 (ENSCAFG00845023594) #26 ENSCAFG00845023553 BPIFA2 (ENSCAFG00845023488) #27 ENSCAFG00845023399 ##24 BPIFB4 (ENSCAFG00845023291) #28 BPIFB3 (ENSCAFG00845023196) #29 BPIFB6 (ENSCAFG00845023097) #30 BPIFB2 (ENSCAFG00845022982) #31 SUN5 (ENSCAFG00845022906) #32 ENSCAFG00845022856 Red fox MODERN SPECIES 79 ITCH (ENSVVUG00000004411) ENSVVUG00000004434 ENSVVUG00000004473 AHCY (ENSVVUG00000004477) ENSVVUG00000004504 ENSVVUG00000004519 RALY (ENSVVUG00000004546) ENSVVUG00000004559 CHMP4B (ENSVVUG00000004581) ZNF341 (ENSVVUG00000004600) PXMP4 (ENSVVUG00000004749) E2F1 (ENSVVUG00000004757) NECAB3 (ENSVVUG00000004770) ACTL10 (ENSVVUG00000004819) CBFA2T2 (ENSVVUG00000004825) SNTA1 (ENSVVUG00000004863) #22 CDK5RAP1 (ENSVVUG00000004885) #23 ENSVVUG00000004922 BPIFB1 (ENSVVUG00000004954) #24 BPIFA1 (ENSVVUG00000004968) #25 BPIFA3 (ENSVVUG00000004970) #26 ENSVVUG00000004973 ENSVVUG00000004976 #27 BPIFB4 (ENSVVUG00000004980) #28 BPIFB3 (ENSVVUG00000004985) #29 BPIFB6 (ENSVVUG00000005002) #30 BPIFB2 (ENSVVUG00000005019) #31 SUN5 (ENSVVUG00000005048) #32 EFCAB8 (ENSVVUG00000005061) DNMT3B (ENSVVUG00000005117) COMMD7 (ENSVVUG00000005192) Felidae ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000156928 Panthera ANCESTRAL SPECIES 2 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 lion MODERN SPECIES 3 MAP1LC3A (ENSPLOG00000017340) DYNLRB1 (ENSPLOG00000017257) ITCH (ENSPLOG00000017081) ENSPLOG00000016963 ASIP (ENSPLOG00000016919) EIF2S2 (ENSPLOG00000016881) RALY (ENSPLOG00000016811) CHMP4B (ENSPLOG00000016734) ZNF341 (ENSPLOG00000016700) PXMP4 (ENSPLOG00000016650) E2F1 (ENSPLOG00000016585) ACTL10 (ENSPLOG00000016575) ENSPLOG00000016536 NECAB3 (ENSPLOG00000016443) CBFA2T2 (ENSPLOG00000016366) SNTA1 (ENSPLOG00000016287) #22 CDK5RAP1 (ENSPLOG00000016219) #23 ENSPLOG00000016115 ##24 BPIFB1 (ENSPLOG00000016033) #24 BPIFA1 (ENSPLOG00000015860) #25 BPIFA3 (ENSPLOG00000015799) #26 ENSPLOG00000015750 BPIFA2 (ENSPLOG00000015684) #27 BPIFB4 (ENSPLOG00000015542) #28 BPIFB3 (ENSPLOG00000015334) #29 BPIFB6 (ENSPLOG00000015103) #30 BPIFB2 (ENSPLOG00000014965) #31 SUN5 (ENSPLOG00000014700) #32 EFCAB8 (ENSPLOG00000014634) MAPRE1 (ENSPLOG00000014581) DNMT3B (ENSPLOG00000014171) leopard MODERN SPECIES 32 PIGU (ENSPPRG00000022523) MAP1LC3A (ENSPPRG00000020454) DYNLRB1 (ENSPPRG00000018205) ITCH (ENSPPRG00000017149) AHCY (ENSPPRG00000015988) ASIP (ENSPPRG00000015476) EIF2S2 (ENSPPRG00000015102) RALY (ENSPPRG00000014593) CHMP4B (ENSPPRG00000013846) ZNF341 (ENSPPRG00000013033) PXMP4 (ENSPPRG00000011904) E2F1 (ENSPPRG00000011405) NECAB3 (ENSPPRG00000011300) ACTL10 (ENSPPRG00000015321) CBFA2T2 (ENSPPRG00000009192) SNTA1 (ENSPPRG00000007797) #22 CDK5RAP1 (ENSPPRG00000007463) #23 ENSPPRG00000006537 ##24 BPIFB1 (ENSPPRG00000005709) #24 BPIFA1 (ENSPPRG00000004405) #25 BPIFA3 (ENSPPRG00000003416) #26 ENSPPRG00000003204 BPIFB4 (ENSPPRG00000003010) #28 BPIFB3 (ENSPPRG00000002108) #29 BPIFB6 (ENSPPRG00000000780) #30 BPIFB2 (ENSPPRG00000000479) #31 SUN5 (ENSPPRG00000000075) #32 EFCAB8 (ENSPPRG00000020444) MAPRE1 (ENSPPRG00000019866) DNMT3B (ENSPPRG00000014375) COMMD7 (ENSPPRG00000011687) Tiger MODERN SPECIES 25 PIGU (ENSPTIG00000009571) MAP1LC3A (ENSPTIG00000008448) DYNLRB1 (ENSPTIG00000007501) ITCH (ENSPTIG00000005169) AHCY (ENSPTIG00000022112) ASIP (ENSPTIG00000022078) EIF2S2 (ENSPTIG00000022041) RALY (ENSPTIG00000021910) CHMP4B (ENSPTIG00000021794) ZNF341 (ENSPTIG00000019844) PXMP4 (ENSPTIG00000018768) E2F1 (ENSPTIG00000016955) ACTL10 (ENSPTIG00000001807) NECAB3 (ENSPTIG00000009683) CBFA2T2 (ENSPTIG00000020570) SNTA1 (ENSPTIG00000018658) #22 CDK5RAP1 (ENSPTIG00000016645) #23 ENSPTIG00000013877 ##24 BPIFB1 (ENSPTIG00000012791) #24 BPIFA1 (ENSPTIG00000008137) #25 BPIFA3 (ENSPTIG00000006775) #26 ENSPTIG00000006019 BPIFA2 (ENSPTIG00000002366) #27 BPIFB4 (ENSPTIG00000021563) #28 BPIFB3 (ENSPTIG00000019519) #29 BPIFB6 (ENSPTIG00000017591) #30 BPIFB2 (ENSPTIG00000017316) #31 SUN5 (ENSPTIG00000013586) #32 EFCAB8 (ENSPTIG00000010965) MAPRE1 (ENSPTIG00000009541) DNMT3B (ENSPTIG00000015474) Cat MODERN SPECIES 2 PIGU (ENSFCAG00000002305) MAP1LC3A (ENSFCAG00000022040) DYNLRB1 (ENSFCAG00000002304) ITCH (ENSFCAG00000008780) AHCY (ENSFCAG00000007301) ASIP (ENSFCAG00000011037) RALY (ENSFCAG00000025252) EIF2S2 (ENSFCAG00000026834) CHMP4B (ENSFCAG00000025893) ZNF341 (ENSFCAG00000018478) E2F1 (ENSFCAG00000005016) NECAB3 (ENSFCAG00000005010) ACTL10 (ENSFCAG00000005015) CA3H20orf144 (ENSFCAG00000021903) CBFA2T2 (ENSFCAG00000030382) SNTA1 (ENSFCAG00000026500) #22 CDK5RAP1 (ENSFCAG00000015197) #23 ENSFCAG00000049613 ENSFCAG00000030030 BPIFA1 (ENSFCAG00000015193) #25 BPIFA3 (ENSFCAG00000022440) #26 ENSFCAG00000015188 BPIFA2 (ENSFCAG00000043660) #27 BPIFB4 (ENSFCAG00000015185) #28 BPIFB3 (ENSFCAG00000015183) #29 BPIFB6 (ENSFCAG00000015181) #30 BPIFB2 (ENSFCAG00000015179) #31 SUN5 (ENSFCAG00000025943) #32 EFCAB8 (ENSFCAG00000037633) MAPRE1 (ENSFCAG00000007783) DNMT3B (ENSFCAG00000007779) Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.pb Chiroptera ANCESTRAL SPECIES 7 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 Megabat MODERN SPECIES 372 CHMP4B (ENSPVAG00000010293) ZNF341 (ENSPVAG00000010292) PXMP4 (ENSPVAG00000010291) E2F1 (ENSPVAG00000010290) C20orf144 (ENSPVAG00000010288) NECAB3 (ENSPVAG00000010287) CBFA2T2 (ENSPVAG00000010286) SNTA1 (ENSPVAG00000010285) #22 CDK5RAP1 (ENSPVAG00000010283) #23 ENSPVAG00000010282 Microchiroptera ANCESTRAL SPECIES 6 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 ENSGT00390000012419 ENSGT00940000157729 ENSGT00520000055578.a.a.c Microbat MODERN SPECIES 997 DYNLRB1 (ENSMLUG00000004820) ITCH (ENSMLUG00000004798) AHCY (ENSMLUG00000001070) ASIP (ENSMLUG00000001062) EIF2S2 (ENSMLUG00000005335) ENSMLUG00000005330 CHMP4B (ENSMLUG00000015397) ENSMLUG00000027593 ZNF341 (ENSMLUG00000015386) PXMP4 (ENSMLUG00000015379) E2F1 (ENSMLUG00000015371) ACTL10 (ENSMLUG00000023024) NECAB3 (ENSMLUG00000015354) CBFA2T2 (ENSMLUG00000015344) ENSMLUG00000023956 SNTA1 (ENSMLUG00000005643) #22 CDK5RAP1 (ENSMLUG00000005632) #23 ENSMLUG00000003825 ENSMLUG00000029998 ##24 ENSMLUG00000003811 BPIFA1 (ENSMLUG00000000670) #25 BPIFA3 (ENSMLUG00000000658) #26 ENSMLUG00000016865 #27 BPIFB4 (ENSMLUG00000016442) #28 BPIFB3 (ENSMLUG00000016437) #29 ENSMLUG00000016424 #30 BPIFB2 (ENSMLUG00000016415) #31 SUN5 (ENSMLUG00000016408) #32 MAPRE1 (ENSMLUG00000016403) DNMT3B (ENSMLUG00000016384) COMMD7 (ENSMLUG00000013887) Greater horseshoe bat MODERN SPECIES 15 MAP1LC3A (ENSRFEG00010007180) ITCH (ENSRFEG00010007315) AHCY (ENSRFEG00010007632) ASIP (ENSRFEG00010007692) EIF2S2 (ENSRFEG00010007720) RALY (ENSRFEG00010007771) CHMP4B (ENSRFEG00010007840) ENSRFEG00010007891 ZNF341 (ENSRFEG00010007927) PXMP4 (ENSRFEG00010008002) E2F1 (ENSRFEG00010008064) NECAB3 (ENSRFEG00010008150) ACTL10 (ENSRFEG00010008302) C20orf144 (ENSRFEG00010008315) CBFA2T2 (ENSRFEG00010008347) SNTA1 (ENSRFEG00010008565) #22 CDK5RAP1 (ENSRFEG00010008644) #23 BPIFB1 (ENSRFEG00010008738) #24 ENSRFEG00010008900 #25 BPIFA3 (ENSRFEG00010009054) #26 BPIFA2 (ENSRFEG00010009183) #27 BPIFB4 (ENSRFEG00010009259) #28 BPIFB3 (ENSRFEG00010009403) #29 BPIFB6 (ENSRFEG00010009586) #30 BPIFB2 (ENSRFEG00010009739) #31 SUN5 (ENSRFEG00010009894) #32 MAPRE1 (ENSRFEG00010010133) DNMT3B (ENSRFEG00010010315) COMMD7 (ENSRFEG00010010850) NOL4L (ENSRFEG00010011006) ASXL1 (ENSRFEG00010011119) Equus ANCESTRAL SPECIES 8 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT01050000245239.e.b ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b.a #24 ENSGT01100000263546.d.b.a.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT01100000263546.d.b.a.a.a.a.b.a #25 ENSGT01100000263546.d.a ##24 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00490000043329.a.a.a.pb ENSGT00940000156928 Donkey MODERN SPECIES 6 ITCH (ENSEASG00005007446) ENSEASG00005037670 ENSEASG00005028379 ENSEASG00005033842 ASIP (ENSEASG00005024850) EIF2S2 (ENSEASG00005008498) RALY (ENSEASG00005008501) ENSEASG00005034253 ZNF341 (ENSEASG00005008514) PXMP4 (ENSEASG00005035010) E2F1 (ENSEASG00005008538) ENSEASG00005032176 ENSEASG00005008547 NECAB3 (ENSEASG00005008543) CBFA2T2 (ENSEASG00005008552) SNTA1 (ENSEASG00005008555) #22 CDK5RAP1 (ENSEASG00005008558) #23 ENSEASG00005036966 ##24 BPIFB1 (ENSEASG00005026747) #24 BPIFA3 (ENSEASG00005008570) #26 ENSEASG00005028659 ENSEASG00005004350 #25 ENSEASG00005034954 ##24 BPIFA2 (ENSEASG00005007789) #27 ENSEASG00005037736 BPIFB4 (ENSEASG00005004467) #28 BPIFB3 (ENSEASG00005004457) #29 BPIFB6 (ENSEASG00005004435) #30 BPIFB2 (ENSEASG00005004416) #31 SUN5 (ENSEASG00005004397) #32 EFCAB8 (ENSEASG00005004382) Horse MODERN SPECIES 14 ITCH (ENSECAG00000016216) ENSECAG00000060369 ENSECAG00000020551 ENSECAG00000055038 ASIP (ENSECAG00000004241) ENSECAG00000040547 EIF2S2 (ENSECAG00000050295) RALY (ENSECAG00000012357) CHMP4B (ENSECAG00000008311) ZNF341 (ENSECAG00000000301) PXMP4 (ENSECAG00000024954) ACTL10 (ENSECAG00000001232) ENSECAG00000049637 NECAB3 (ENSECAG00000012086) CBFA2T2 (ENSECAG00000025052) SNTA1 (ENSECAG00000057698) #22 SNTA1 (ENSECAG00000020715) #23 ENSECAG00000000778 ##24 ENSECAG00000023336 #24 ENSECAG00000041183 #25 ENSECAG00000020661 #26 ENSECAG00000027711 #26 ENSECAG00000014407 #24 ENSECAG00000053425 ENSECAG00000037593 #25 ENSECAG00000022575 #25 ENSECAG00000041946 #25 ENSECAG00000044582 ##24 BPIFA2 (ENSECAG00000000297) #27 LATH (ENSECAG00000033314) ##24 ENSECAG00000033869 #27 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00930000151259 Xenarthra ANCESTRAL SPECIES 316 ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 Sloth MODERN SPECIES 389 SNTA1 (ENSCHOG00000002162) #22 Armadillo MODERN SPECIES 1934 ENSDNOG00000048473 EIF2S2 (ENSDNOG00000047014) ENSDNOG00000003227 ENSDNOG00000038139 CHMP4B (ENSDNOG00000032154) ZNF341 (ENSDNOG00000034368) PXMP4 (ENSDNOG00000007975) E2F1 (ENSDNOG00000046733) ACTL10 (ENSDNOG00000032070) ENSDNOG00000007969 NECAB3 (ENSDNOG00000039751) CBFA2T2 (ENSDNOG00000007950) SNTA1 (ENSDNOG00000040663) #22 ENSDNOG00000043650 CDK5RAP1 (ENSDNOG00000015236) #23 ENSDNOG00000039006 Afrotheria ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00930000151259 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000160361 #23 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##24 ENSGT01100000263546.d.b.b #24 ENSGT01100000263546.d.b.a.a.a.a #25 ENSGT01100000263546.d.b.a.a.a.b #26 ENSGT00510000049750 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 ENSGT00930000151259 Elephant MODERN SPECIES 180 MAP1LC3A (ENSLAFG00000027645) DYNLRB1 (ENSLAFG00000029820) ITCH (ENSLAFG00000011603) ENSLAFG00000028026 ASIP (ENSLAFG00000005229) EIF2S2 (ENSLAFG00000016639) RALY (ENSLAFG00000000321) CHMP4B (ENSLAFG00000022958) ZNF341 (ENSLAFG00000007128) PXMP4 (ENSLAFG00000004616) E2F1 (ENSLAFG00000018114) ACTL10 (ENSLAFG00000018108) ENSLAFG00000018104 NECAB3 (ENSLAFG00000018096) CBFA2T2 (ENSLAFG00000018088) SNTA1 (ENSLAFG00000027816) #22 CDK5RAP1 (ENSLAFG00000001172) #23 ENSLAFG00000014548 ENSLAFG00000028139 ##24 BPIFB1 (ENSLAFG00000010267) #24 BPIFA1 (ENSLAFG00000010265) #25 ENSLAFG00000003615 #26 ENSLAFG00000000105 #27 BPIFB4 (ENSLAFG00000002061) #28 BPIFB3 (ENSLAFG00000018176) #29 BPIFB6 (ENSLAFG00000028326) #30 BPIFB2 (ENSLAFG00000008987) #31 SUN5 (ENSLAFG00000021496) #32 ENSLAFG00000032038 ENSLAFG00000020535 MAPRE1 (ENSLAFG00000015453) Hyrax MODERN SPECIES 338 SNTA1 (ENSPCAG00000006991) #22 Tenrec MODERN SPECIES 478 SNTA1 (ENSETEG00000014345) #22 Marsupialia ANCESTRAL SPECIES 9 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.g ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000155266.x ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00940000158554 ENSGT00940000157465.a ENSGT00940000159358 ENSGT00420000029848.A ENSGT00940000158327 ENSGT00940000156413 Opossum MODERN SPECIES ITCH (ENSMODG00000002732) AHCY (ENSMODG00000002753) ASIP (ENSMODG00000002762) ENSMODG00000002765 EIF2S2 (ENSMODG00000002805) RALY (ENSMODG00000002819) ENSMODG00000002836 CHMP4B (ENSMODG00000002830) ZNF341 (ENSMODG00000002856) PXMP4 (ENSMODG00000002864) E2F1 (ENSMODG00000002875) ENSMODG00000002988 ENSMODG00000002993 NECAB3 (ENSMODG00000002977) CBFA2T2 (ENSMODG00000003023) SNTA1 (ENSMODG00000003050) #22 TOX2 (ENSMODG00000003070) ENSMODG00000023076 SRSF6 (ENSMODG00000003107) L3MBTL1 (ENSMODG00000003647) ENSMODG00000003673 ENSMODG00000003708 MAML1 (ENSMODG00000003725) LTC4S (ENSMODG00000003733) MGAT4B (ENSMODG00000003778) SQSTM1 (ENSMODG00000003806) TBC1D9B (ENSMODG00000003882) ENSMODG00000003904 FLT4 (ENSMODG00000003918) ENSMODG00000003922 MAPK9 (ENSMODG00000003946) Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.g ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00940000158554 ENSGT00940000157465.a ENSGT00940000159358 ENSGT00420000029848.A ENSGT00940000158327 ENSGT00940000156413 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.g ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.x.a ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00940000158554 ENSGT00940000157465.a ENSGT00940000159358 ENSGT00420000029848.A ENSGT00940000158327 ENSGT00940000156413 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.g ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.x.a ENSGT00940000157601.x.b ENSGT00940000154663 ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000156526.a ENSGT00390000002781 ENSGT00940000158554 ENSGT00940000157465.a ENSGT00940000159358 ENSGT00420000029848.A ENSGT00940000158327 ENSGT00940000156413 Common wonbat MODERN SPECIES 1023 MAP1LC3A (ENSVURG00010019204) DYNLRB1 (ENSVURG00010019208) ITCH (ENSVURG00010019217) AHCY (ENSVURG00010019234) ASIP (ENSVURG00010019239) EIF2S2 (ENSVURG00010019246) ENSVURG00010019251 CHMP4B (ENSVURG00010019263) ENSVURG00010019269 ZNF341 (ENSVURG00010019277) PXMP4 (ENSVURG00010019297) E2F1 (ENSVURG00010019304) NECAB3 (ENSVURG00010019324) ACTL10 (ENSVURG00010019341) CBFA2T2 (ENSVURG00010019347) SNTA1 (ENSVURG00010019377) #22 TOX2 (ENSVURG00010019590) SRSF6 (ENSVURG00010019601) L3MBTL1 (ENSVURG00010019617) CANX (ENSVURG00010019632) MAML1 (ENSVURG00010019659) SQSTM1 (ENSVURG00010019670) TBC1D9B (ENSVURG00010019683) RNF130 (ENSVURG00010019705) FLT4 (ENSVURG00010019743) ENSVURG00010019769 MAPK9 (ENSVURG00010019784) GFPT2 (ENSVURG00010019801) CNOT6 (ENSVURG00010019814) RASGEF1C (ENSVURG00010019833) CLK4 (ENSVURG00010019863) koala MODERN SPECIES 74 DYNLRB1 (ENSPCIG00000028154) ITCH (ENSPCIG00000028155) ENSPCIG00000028157 ENSPCIG00000028158 ASIP (ENSPCIG00000028159) EIF2S2 (ENSPCIG00000011155) ENSPCIG00000011153 CHMP4B (ENSPCIG00000005848) ENSPCIG00000005849 ZNF341 (ENSPCIG00000005844) PXMP4 (ENSPCIG00000005843) E2F1 (ENSPCIG00000005835) NECAB3 (ENSPCIG00000005831) ENSPCIG00000005833 ENSPCIG00000005830 SNTA1 (ENSPCIG00000005829) #22 TOX2 (ENSPCIG00000005825) SRSF6 (ENSPCIG00000003820) L3MBTL1 (ENSPCIG00000003824) ENSPCIG00000033556 CANX (ENSPCIG00000003888) MAML1 (ENSPCIG00000003902) ENSPCIG00000003908 MGAT4B (ENSPCIG00000003915) SQSTM1 (ENSPCIG00000003936) TBC1D9B (ENSPCIG00000003952) ENSPCIG00000003992 FLT4 (ENSPCIG00000004027) ENSPCIG00000004056 MAPK9 (ENSPCIG00000004062) GFPT2 (ENSPCIG00000004080) Wallaby MODERN SPECIES 1094 SNTA1 (ENSMEUG00000012963) #22 Tasmanian devil MODERN SPECIES 1 PIGU (ENSSHAG00000017606) MAP1LC3A (ENSSHAG00000030605) ITCH (ENSSHAG00000030062) AHCY (ENSSHAG00000031421) ENSSHAG00000031644 EIF2S2 (ENSSHAG00000029026) ENSSHAG00000022710 ENSSHAG00000026098 ENSSHAG00000022664 ZNF341 (ENSSHAG00000022447) PXMP4 (ENSSHAG00000029249) ENSSHAG00000023415 E2F1 (ENSSHAG00000029215) ENSSHAG00000023391 ENSSHAG00000024966 ENSSHAG00000015173 #22 ENSSHAG00000013874 ENSSHAG00000012805 ENSSHAG00000028809 ENSSHAG00000011510 MAML1 (ENSSHAG00000011151) LTC4S (ENSSHAG00000025649) MGAT4B (ENSSHAG00000010968) SQSTM1 (ENSSHAG00000025384) ENSSHAG00000009809 ENSSHAG00000008447 ENSSHAG00000007344 ENSSHAG00000006299 MAPK9 (ENSSHAG00000005542) ENSSHAG00000004019 ENSSHAG00000017436 Platypus MODERN SPECIES 19 PTPRT (ENSOANG00000015082) MYBL2 (ENSOANG00000050677) IFT52 (ENSOANG00000014960) SGK2 (ENSOANG00000039782) ATOSA (ENSOANG00000002613) ARPP19 (ENSOANG00000040266) MYO5A (ENSOANG00000004162) MYO5C (ENSOANG00000004161) GNB5 (ENSOANG00000047160) ENSOANG00000041390 MAPK6 (ENSOANG00000004189) LEO1 (ENSOANG00000003376) TMOD3 (ENSOANG00000038195) ENSOANG00000040856 CBFA2T2 (ENSOANG00000002585) SNTA1 (ENSOANG00000002101) #22 ONECUT1 (ENSOANG00000040861) WDR72 (ENSOANG00000013014) ENSOANG00000040269 ENSOANG00000043837 ENSOANG00000048818 ENSOANG00000012145 ENSOANG00000015609 ENSOANG00000005431 ENSOANG00000041955 ENSOANG00000014372 ENSOANG00000009664 ENSOANG00000039787 ENSOANG00000036090 ENSOANG00000040104 ENSOANG00000048489 Sauria ANCESTRAL SPECIES 16 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00940000160950 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b Lepidosauria ANCESTRAL SPECIES 6 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 tuatara MODERN SPECIES 1490 ENSSPUG00000012622 CHMP4B (ENSSPUG00000012632) ZNF341 (ENSSPUG00000012648) PXMP4 (ENSSPUG00000012666) E2F1 (ENSSPUG00000012675) NECAB3 (ENSSPUG00000012690) ACTL10 (ENSSPUG00000012708) CBFA2T2 (ENSSPUG00000012717) SNTA1 (ENSSPUG00000012734) #22 TOX2 (ENSSPUG00000012752) Episquamata ANCESTRAL SPECIES 1 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 Laterata ANCESTRAL SPECIES 14 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 Common wall lizard MODERN SPECIES 14 ENSPMRG00000020811 ASIP (ENSPMRG00000020805) EIF2S2 (ENSPMRG00000020795) RALY (ENSPMRG00000020782) ENSPMRG00000020778 CHMP4B (ENSPMRG00000020773) ZNF341 (ENSPMRG00000020759) PXMP4 (ENSPMRG00000020743) E2F1 (ENSPMRG00000020737) ENSPMRG00000020730 ENSPMRG00000020727 ACTL10 (ENSPMRG00000020723) NECAB3 (ENSPMRG00000020712) ENSPMRG00000020695 CBFA2T2 (ENSPMRG00000020681) SNTA1 (ENSPMRG00000020670) #22 TOX2 (ENSPMRG00000020639) ENSPMRG00000020620 ENSPMRG00000020615 EDEM2 (ENSPMRG00000020578) TRPC4AP (ENSPMRG00000020462) ENSPMRG00000019018 GSS (ENSPMRG00000018774) ACSS2 (ENSPMRG00000018560) SOGA1 (ENSPMRG00000018470) ENSPMRG00000018424 ENSPMRG00000018414 ENSPMRG00000018204 ENSPMRG00000017707 ENSPMRG00000017613 ENSPMRG00000017604 Argentine black and white tegu MODERN SPECIES 28 AHCY (ENSSMRG00000001207) ENSSMRG00000001217 ASIP (ENSSMRG00000001224) ENSSMRG00000001230 EIF2S2 (ENSSMRG00000001247) RALY (ENSSMRG00000001280) ENSSMRG00000001318 ENSSMRG00000001388 CHMP4B (ENSSMRG00000001390) ZNF341 (ENSSMRG00000001447) PXMP4 (ENSSMRG00000001453) E2F1 (ENSSMRG00000001456) NECAB3 (ENSSMRG00000001460) ACTL10 (ENSSMRG00000001490) CBFA2T2 (ENSSMRG00000001500) SNTA1 (ENSSMRG00000001526) #22 TOX2 (ENSSMRG00000001545) EDEM2 (ENSSMRG00000001620) TRPC4AP (ENSSMRG00000001628) ENSSMRG00000001637 ENSSMRG00000001837 GSS (ENSSMRG00000001989) ACSS2 (ENSSMRG00000001992) SOGA1 (ENSSMRG00000002082) ENSSMRG00000002097 SAMHD1 (ENSSMRG00000002105) RBL1 (ENSSMRG00000002155) CHD6 (ENSSMRG00000002188) RALGAPB (ENSSMRG00000002234) NDRG3 (ENSSMRG00000002245) ENSSMRG00000002257 Toxicofera ANCESTRAL SPECIES 1 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 Lizard MODERN SPECIES 3 RALY (ENSACAG00000008983) ENSACAG00000043994 ENSACAG00000037357 ENSACAG00000040646 ENSACAG00000038084 CHMP4B (ENSACAG00000008891) ZNF341 (ENSACAG00000008818) PXMP4 (ENSACAG00000008802) ENSACAG00000042361 ENSACAG00000037827 ENSACAG00000008761 ENSACAG00000002219 NECAB3 (ENSACAG00000008697) ENSACAG00000035390 CBFA2T2 (ENSACAG00000008567) SNTA1 (ENSACAG00000008475) #22 ENSACAG00000043850 ENSACAG00000008446 ENSACAG00000042806 ENSACAG00000036722 ENSACAG00000010388 ENSACAG00000008338 TRPC4AP (ENSACAG00000008237) ENSACAG00000007497 ENSACAG00000007388 ENSACAG00000007148 SOGA1 (ENSACAG00000007120) TLDC2 (ENSACAG00000007093) SAMHD1 (ENSACAG00000007007) RBL1 (ENSACAG00000006847) ENSACAG00000006842 Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 1 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b.a #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 Indian cobra MODERN SPECIES 2 MAP1LC3A (ENSNNAG00000000871) DYNLRB1 (ENSNNAG00000000888) ITCH (ENSNNAG00000000909) AHCY (ENSNNAG00000000953) ASIP (ENSNNAG00000000968) EIF2S2 (ENSNNAG00000000981) ENSNNAG00000000994 ENSNNAG00000001010 CHMP4B (ENSNNAG00000001020) ZNF341 (ENSNNAG00000001049) PXMP4 (ENSNNAG00000001074) E2F1 (ENSNNAG00000001105) NECAB3 (ENSNNAG00000001130) ENSNNAG00000001144 CBFA2T2 (ENSNNAG00000001161) SNTA1 (ENSNNAG00000001177) #22 TOX2 (ENSNNAG00000001195) ENSNNAG00000001221 EDEM2 (ENSNNAG00000001243) TRPC4AP (ENSNNAG00000001268) ENSNNAG00000002064 GSS (ENSNNAG00000006759) ACSS2 (ENSNNAG00000006792) SOGA1 (ENSNNAG00000006897) ENSNNAG00000006913 SAMHD1 (ENSNNAG00000006949) RBL1 (ENSNNAG00000007096) ENSNNAG00000009289 ENSNNAG00000009298 CHD6 (ENSNNAG00000009784) RALGAPB (ENSNNAG00000016407) Elapidae_a ANCESTRAL SPECIES 3 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b.a #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 Acanthophiinae ANCESTRAL SPECIES 2 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b.a #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 Mainland tiger snake MODERN SPECIES 214 SNTA1 (ENSNSUG00000018991) #22 TOX2 (ENSNSUG00000018992) EDEM2 (ENSNSUG00000018993) TRPC4AP (ENSNSUG00000018994) ENSNSUG00000018995 GSS (ENSNSUG00000018997) ACSS2 (ENSNSUG00000018998) SOGA1 (ENSNSUG00000018999) ENSNSUG00000019000 Eastern brown snake MODERN SPECIES 8 MAP1LC3A (ENSPTXG00000007795) DYNLRB1 (ENSPTXG00000007798) ITCH (ENSPTXG00000007800) AHCY (ENSPTXG00000007803) ASIP (ENSPTXG00000007806) EIF2S2 (ENSPTXG00000007809) ENSPTXG00000007811 ENSPTXG00000007812 CHMP4B (ENSPTXG00000007814) ZNF341 (ENSPTXG00000007815) PXMP4 (ENSPTXG00000007816) E2F1 (ENSPTXG00000007817) NECAB3 (ENSPTXG00000007818) ACTL10 (ENSPTXG00000007822) CBFA2T2 (ENSPTXG00000007823) SNTA1 (ENSPTXG00000007837) #22 TOX2 (ENSPTXG00000007838) ENSPTXG00000007839 EDEM2 (ENSPTXG00000007840) TRPC4AP (ENSPTXG00000007841) ENSPTXG00000007842 GSS (ENSPTXG00000007844) ACSS2 (ENSPTXG00000007845) SOGA1 (ENSPTXG00000007847) ENSPTXG00000000040 SAMHD1 (ENSPTXG00000000069) CHD6 (ENSPTXG00000000268) ENSPTXG00000000404 RALGAPB (ENSPTXG00000000412) NDRG3 (ENSPTXG00000000472) ENSPTXG00000000489 Blue-lipped sea krait MODERN SPECIES 4675 ENSLLTG00000008709 #22 Elapidae ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.b #22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.b #22 Blue-lipped sea krait MODERN SPECIES 3153 ENSLLTG00000004838 #22 Archelosauria ANCESTRAL SPECIES ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160950 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00390000004910 ENSGT00390000005575 ENSGT00960000189441 ENSGT00940000162847 ENSGT00940000153998.a ENSGT01000000215044 ENSGT00940000156028 ENSGT00390000003446 ENSGT00940000162182 Cryptodira ANCESTRAL SPECIES 7 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00940000160950 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 Chinese turtle MODERN SPECIES 1953 CBFA2T2 (ENSPSIG00000006165) ENSPSIG00000008084 #22 Testudinoidea ANCESTRAL SPECIES 28 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00940000160950 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 Testudinidae ANCESTRAL SPECIES 34 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 Abingdon island giant tortoise MODERN SPECIES 1738 ENSCABG00000022367 ENSCABG00000022368 CHMP4B (ENSCABG00000022369) ZNF341 (ENSCABG00000022370) PXMP4 (ENSCABG00000022371) E2F1 (ENSCABG00000022372) NECAB3 (ENSCABG00000022373) ACTL10 (ENSCABG00000022374) CBFA2T2 (ENSCABG00000022375) SNTA1 (ENSCABG00000022385) #22 TOX2 (ENSCABG00000022388) EDEM2 (ENSCABG00000022391) Goode s thornscrub tortoise MODERN SPECIES 5 MAP1LC3A (ENSGEVG00005012664) DYNLRB1 (ENSGEVG00005012686) ITCH (ENSGEVG00005012721) AHCY (ENSGEVG00005012811) ASIP (ENSGEVG00005012839) EIF2S2 (ENSGEVG00005012979) RALY (ENSGEVG00005013016) CHMP4B (ENSGEVG00005013137) ZNF341 (ENSGEVG00005013173) PXMP4 (ENSGEVG00005013238) E2F1 (ENSGEVG00005013271) NECAB3 (ENSGEVG00005013465) ACTL10 (ENSGEVG00005013631) ENSGEVG00005013648 CBFA2T2 (ENSGEVG00005013689) SNTA1 (ENSGEVG00005013723) #22 TOX2 (ENSGEVG00005013756) EDEM2 (ENSGEVG00005013803) TRPC4AP (ENSGEVG00005013841) ENSGEVG00005013945 GSS (ENSGEVG00005014633) ACSS2 (ENSGEVG00005014698) SOGA1 (ENSGEVG00005014842) ENSGEVG00005015088 SAMHD1 (ENSGEVG00005015144) RBL1 (ENSGEVG00005015196) CHD6 (ENSGEVG00005015334) RALGAPB (ENSGEVG00005015620) NDRG3 (ENSGEVG00005015883) SLA2 (ENSGEVG00005015961) PHF20 (ENSGEVG00005015992) Emydidae ANCESTRAL SPECIES 50 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00960000191106 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160950 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00950000182872.f.a.a.b ENSGT00940000160331 ENSGT00940000156477 ENSGT00940000164502 painted turtle MODERN SPECIES 700 MAP1LC3A (ENSCPBG00000018213) ITCH (ENSCPBG00000018232) AHCY (ENSCPBG00000018709) ASIP (ENSCPBG00000019156) EIF2S2 (ENSCPBG00000019159) RALY (ENSCPBG00000019164) ENSCPBG00000019171 CHMP4B (ENSCPBG00000019173) ZNF341 (ENSCPBG00000019174) PXMP4 (ENSCPBG00000019176) E2F1 (ENSCPBG00000019177) NECAB3 (ENSCPBG00000019179) ENSCPBG00000019182 ENSCPBG00000019184 CBFA2T2 (ENSCPBG00000019187) SNTA1 (ENSCPBG00000019190) #22 TOX2 (ENSCPBG00000019193) EDEM2 (ENSCPBG00000019199) TRPC4AP (ENSCPBG00000019208) ENSCPBG00000019257 GSS (ENSCPBG00000019329) ACSS2 (ENSCPBG00000019337) SOGA1 (ENSCPBG00000019350) ENSCPBG00000019354 SAMHD1 (ENSCPBG00000019358) RBL1 (ENSCPBG00000019364) CHD6 (ENSCPBG00000019382) RALGAPB (ENSCPBG00000019414) NDRG3 (ENSCPBG00000019437) SLA2 (ENSCPBG00000019447) PHF20 (ENSCPBG00000019457) Three-toed box turtle MODERN SPECIES 108 MAP1LC3A (ENSTMTG00000017835) DYNLRB1 (ENSTMTG00000017842) ITCH (ENSTMTG00000017861) AHCY (ENSTMTG00000017923) ASIP (ENSTMTG00000017959) EIF2S2 (ENSTMTG00000018010) RALY (ENSTMTG00000018027) ENSTMTG00000018045 CHMP4B (ENSTMTG00000018087) ZNF341 (ENSTMTG00000018098) PXMP4 (ENSTMTG00000018136) E2F1 (ENSTMTG00000018143) NECAB3 (ENSTMTG00000018162) ENSTMTG00000018196 CBFA2T2 (ENSTMTG00000018209) SNTA1 (ENSTMTG00000018232) #22 TOX2 (ENSTMTG00000018257) EDEM2 (ENSTMTG00000018270) TRPC4AP (ENSTMTG00000018290) MYH7B (ENSTMTG00000018334) GSS (ENSTMTG00000018443) ACSS2 (ENSTMTG00000018480) SOGA1 (ENSTMTG00000018547) ENSTMTG00000018613 SAMHD1 (ENSTMTG00000018637) RBL1 (ENSTMTG00000018676) CHD6 (ENSTMTG00000018734) RALGAPB (ENSTMTG00000018881) NDRG3 (ENSTMTG00000018931) SLA2 (ENSTMTG00000018980) PHF20 (ENSTMTG00000019163) Archosauria ANCESTRAL SPECIES 13 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Aves ANCESTRAL SPECIES 16 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Neognathae ANCESTRAL SPECIES 16 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Galloanserae ANCESTRAL SPECIES 15 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663.cb ENSGT00940000154663.bb ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Phasianidae ANCESTRAL SPECIES 15 ENSGT00940000158315 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663.bb ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.b ENSGT00940000159233.a.a ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT01070000257249 ENSGT00720000108866 Japanese quail MODERN SPECIES 12 MAP1LC3A (ENSCJPG00005020526) ENSCJPG00005020528 ENSCJPG00005020529 ITCH (ENSCJPG00005020530) AHCY (ENSCJPG00005020661) ASIP (ENSCJPG00005020663) EIF2S2 (ENSCJPG00005020665) RALY (ENSCJPG00005020667) ENSCJPG00005020678 CHMP4B (ENSCJPG00005020680) ZNF341 (ENSCJPG00005020682) PXMP4 (ENSCJPG00005020684) E2F1 (ENSCJPG00005020685) NECAB3 (ENSCJPG00005020686) CBFA2T2 (ENSCJPG00005020688) SNTA1 (ENSCJPG00005020689) #22 TOX2 (ENSCJPG00005020690) ENSCJPG00005020691 ENSCJPG00005020692 ENSCJPG00005020693 TRPC4AP (ENSCJPG00005020696) ENSCJPG00005020708 GSS (ENSCJPG00005020716) ACSS2 (ENSCJPG00005020717) SOGA1 (ENSCJPG00005020720) PTPRT (ENSCJPG00005020739) MYBL2 (ENSCJPG00005020838) IFT52 (ENSCJPG00005020839) SGK2 (ENSCJPG00005020840) SLC32A1 (ENSCJPG00005020841) ARHGAP40 (ENSCJPG00005020842) Phasianidae_b ANCESTRAL SPECIES 15 ENSGT00940000158315 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663.bb ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.b ENSGT00940000159233.a.a ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT01070000257249 ENSGT00720000108866 Chicken MODERN SPECIES 12 DYNLRB1 (ENSGALG00010024672) ENSGALG00010024685 ENSGALG00010024707 ITCH (ENSGALG00010024723) AHCY (ENSGALG00010024732) ASIP (ENSGALG00010024739) EIF2S2 (ENSGALG00010024754) RALY (ENSGALG00010024769) ENSGALG00010024375 CHMP4B (ENSGALG00010024392) ZNF341 (ENSGALG00010022030) PXMP4 (ENSGALG00010022044) E2F1 (ENSGALG00010022055) NECAB3 (ENSGALG00010025413) CBFA2T2 (ENSGALG00010022125) SNTA1 (ENSGALG00010022144) #22 TOX2 (ENSGALG00010022169) EDEM2 (ENSGALG00010024363) TRPC4AP (ENSGALG00010022664) MYH7B (ENSGALG00010022684) GSS (ENSGALG00010023412) ACSS2 (ENSGALG00010023439) SOGA1 (ENSGALG00010023482) PTPRT (ENSGALG00010023545) ENSGALG00010025008 MYBL2 (ENSGALG00010023572) IFT52 (ENSGALG00010023627) SGK2 (ENSGALG00010023673) SLC32A1 (ENSGALG00010023684) ARHGAP40 (ENSGALG00010023712) ENSGALG00010023721 Turkey MODERN SPECIES 14 MAP1LC3A (ENSMGAG00000002052) DYNLRB1 (ENSMGAG00000002057) ITCH (ENSMGAG00000002065) AHCY (ENSMGAG00000002143) ASIP (ENSMGAG00000002166) EIF2S2 (ENSMGAG00000002174) RALY (ENSMGAG00000002214) ENSMGAG00000000775 ENSMGAG00000002583 ENSMGAG00000000789 ENSMGAG00000002621 ENSMGAG00000002490 ENSMGAG00000002533 ENSMGAG00000022366 ENSMGAG00000002485 ENSMGAG00000020439 #22 ENSMGAG00000002364 ENSMGAG00000002276 E2F1 (ENSMGAG00000002385) ENSMGAG00000020478 ENSMGAG00000002408 ENSMGAG00000002423 ENSMGAG00000002444 ENSMGAG00000002459 ENSMGAG00000017841 ENSMGAG00000004039 ENSMGAG00000004044 R3HDML (ENSMGAG00000004016) ENSMGAG00000003970 ENSMGAG00000003874 ENSMGAG00000003949 Anatidae ANCESTRAL SPECIES 22 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663.cb ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Pink-footed goose MODERN SPECIES 10 KCNS1 (ENSABRG00000018756) ENSABRG00000018749 MATN4 (ENSABRG00000018746) RBPJL (ENSABRG00000018726) AHCY (ENSABRG00000018714) ASIP (ENSABRG00000018698) EIF2S2 (ENSABRG00000018685) RALY (ENSABRG00000018676) ENSABRG00000018650 ENSABRG00000018638 ZNF341 (ENSABRG00000018632) PXMP4 (ENSABRG00000018629) E2F1 (ENSABRG00000018627) NECAB3 (ENSABRG00000018624) CBFA2T2 (ENSABRG00000018621) SNTA1 (ENSABRG00000018613) #22 TOX2 (ENSABRG00000018605) EDEM2 (ENSABRG00000018594) TRPC4AP (ENSABRG00000018584) ENSABRG00000018576 ENSABRG00000017810 GSS (ENSABRG00000017463) ACSS2 (ENSABRG00000017432) SOGA1 (ENSABRG00000017382) PTPRT (ENSABRG00000017288) Duck MODERN SPECIES 12 STK4 (ENSAPLG00000008260) KCNS1 (ENSAPLG00000027411) ENSAPLG00000017021 MATN4 (ENSAPLG00000008140) RBPJL (ENSAPLG00000008031) AHCY (ENSAPLG00000007974) ASIP (ENSAPLG00000007960) EIF2S2 (ENSAPLG00000013245) RALY (ENSAPLG00000012983) ENSAPLG00000012568 CHMP4B (ENSAPLG00000012481) ZNF341 (ENSAPLG00000012237) PXMP4 (ENSAPLG00000012234) NECAB3 (ENSAPLG00000011538) CBFA2T2 (ENSAPLG00000011108) SNTA1 (ENSAPLG00000030952) #22 TOX2 (ENSAPLG00000009436) EDEM2 (ENSAPLG00000009712) TRPC4AP (ENSAPLG00000009980) ENSAPLG00000011220 GSS (ENSAPLG00000015589) ACSS2 (ENSAPLG00000015932) ENSAPLG00000023177 ENSAPLG00000002683 MYBL2 (ENSAPLG00000005213) IFT52 (ENSAPLG00000005680) SGK2 (ENSAPLG00000006291) SLC32A1 (ENSAPLG00000007083) ARHGAP40 (ENSAPLG00000007202) ENSAPLG00000023291 ACTR5 (ENSAPLG00000007588) Neognathae_b ANCESTRAL SPECIES 17 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Passeriformes ANCESTRAL SPECIES 19 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Great tit MODERN SPECIES 12 ENSPMJG00000002059 ENSPMJG00000002089 AHCY (ENSPMJG00000002096) ASIP (ENSPMJG00000002109) EIF2S2 (ENSPMJG00000002209) RALY (ENSPMJG00000002234) ENSPMJG00000002258 ENSPMJG00000002264 CHMP4B (ENSPMJG00000002283) ZNF341 (ENSPMJG00000002302) E2F1 (ENSPMJG00000002326) NECAB3 (ENSPMJG00000002376) ACTL10 (ENSPMJG00000002387) CBFA2T2 (ENSPMJG00000002396) ENSPMJG00000002424 SNTA1 (ENSPMJG00000002437) #22 TOX2 (ENSPMJG00000002480) EDEM2 (ENSPMJG00000002496) TRPC4AP (ENSPMJG00000002524) ENSPMJG00000002555 GSS (ENSPMJG00000002581) ACSS2 (ENSPMJG00000002589) SOGA1 (ENSPMJG00000002632) PTPRT (ENSPMJG00000002773) MYBL2 (ENSPMJG00000002868) IFT52 (ENSPMJG00000002877) SGK2 (ENSPMJG00000002883) SLC32A1 (ENSPMJG00000002922) ARHGAP40 (ENSPMJG00000002928) ENSPMJG00000002948 ACTR5 (ENSPMJG00000002951) Passeriformes_d ANCESTRAL SPECIES 19 ENSGT00940000171155 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.fb ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Flycatcher MODERN SPECIES 12 ENSFALG00000025812 ENSFALG00000012779 ENSFALG00000027527 AHCY (ENSFALG00000010589) ASIP (ENSFALG00000025930) EIF2S2 (ENSFALG00000010608) ENSFALG00000026368 CHMP4B (ENSFALG00000005962) ZNF341 (ENSFALG00000005944) PXMP4 (ENSFALG00000005928) ENSFALG00000005914 ENSFALG00000005907 ACTL10 (ENSFALG00000014485) ENSFALG00000024659 CBFA2T2 (ENSFALG00000005880) SNTA1 (ENSFALG00000005861) #22 ENSFALG00000005857 ENSFALG00000024458 ENSFALG00000023711 ENSFALG00000005853 TRPC4AP (ENSFALG00000005846) ENSFALG00000005834 GSS (ENSFALG00000022988) ENSFALG00000005787 ENSFALG00000005767 ENSFALG00000005753 MYBL2 (ENSFALG00000005745) ENSFALG00000005735 SGK2 (ENSFALG00000005698) ENSFALG00000005684 ENSFALG00000005682 Passeriformes_g ANCESTRAL SPECIES 19 ENSGT00940000171155.c ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.fb ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Passeroidea ANCESTRAL SPECIES 18 ENSGT00940000160455 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.fb ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Zebra finch MODERN SPECIES 13 EIF6 (ENSTGUG00000024120) MMP24 (ENSTGUG00000003646) AHCY (ENSTGUG00000003666) ASIP (ENSTGUG00000019882) EIF2S2 (ENSTGUG00000024815) RALY (ENSTGUG00000003715) ENSTGUG00000003727 CHMP4B (ENSTGUG00000003739) ZNF341 (ENSTGUG00000003745) PXMP4 (ENSTGUG00000019081) E2F1 (ENSTGUG00000028557) NECAB3 (ENSTGUG00000003767) ENSTGUG00000020460 CBFA2T2 (ENSTGUG00000003776) ENSTGUG00000025881 SNTA1 (ENSTGUG00000003805) #22 TOX2 (ENSTGUG00000024441) EDEM2 (ENSTGUG00000003813) TRPC4AP (ENSTGUG00000003820) ENSTGUG00000003883 GSS (ENSTGUG00000004252) ACSS2 (ENSTGUG00000004272) SOGA1 (ENSTGUG00000004310) PTPRT (ENSTGUG00000004341) MYBL2 (ENSTGUG00000004426) IFT52 (ENSTGUG00000004454) SGK2 (ENSTGUG00000004480) SLC32A1 (ENSTGUG00000004537) ARHGAP40 (ENSTGUG00000004541) ENSTGUG00000027806 ACTR5 (ENSTGUG00000004563) Common canary MODERN SPECIES 21 MAP1LC3A (ENSSCAG00000008224) DYNLRB1 (ENSSCAG00000008227) ITCH (ENSSCAG00000008233) AHCY (ENSSCAG00000008244) ASIP (ENSSCAG00000008252) EIF2S2 (ENSSCAG00000008277) RALY (ENSSCAG00000008287) CHMP4B (ENSSCAG00000008301) ZNF341 (ENSSCAG00000008321) PXMP4 (ENSSCAG00000008359) E2F1 (ENSSCAG00000008365) NECAB3 (ENSSCAG00000008372) ACTL10 (ENSSCAG00000008374) CBFA2T2 (ENSSCAG00000008377) SNTA1 (ENSSCAG00000008383) #22 TOX2 (ENSSCAG00000008392) EDEM2 (ENSSCAG00000008399) TRPC4AP (ENSSCAG00000008405) ENSSCAG00000008445 GSS (ENSSCAG00000008801) ACSS2 (ENSSCAG00000008852) SOGA1 (ENSSCAG00000009234) PTPRT (ENSSCAG00000009769) MYBL2 (ENSSCAG00000012134) IFT52 (ENSSCAG00000012142) SGK2 (ENSSCAG00000012152) SLC32A1 (ENSSCAG00000012166) ARHGAP40 (ENSSCAG00000012178) ENSSCAG00000012195 ACTR5 (ENSSCAG00000012202) Medium ground finch MODERN SPECIES 261 ENSGFOG00000002622 CHMP4B (ENSGFOG00000002598) ZNF341 (ENSGFOG00000006272) PXMP4 (ENSGFOG00000006264) E2F1 (ENSGFOG00000006251) ENSGFOG00000006244 ENSGFOG00000006238 CBFA2T2 (ENSGFOG00000006230) SNTA1 (ENSGFOG00000005847) #22 TOX2 (ENSGFOG00000005826) Neognathae_c ANCESTRAL SPECIES 20 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000155326 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00490000043380 ENSGT00940000162174 ENSGT00950000186009 ENSGT00720000108866 Golden eagle MODERN SPECIES 19 MAP1LC3A (ENSACCG00020002899) DYNLRB1 (ENSACCG00020002883) ITCH (ENSACCG00020002861) AHCY (ENSACCG00020002842) ASIP (ENSACCG00020002830) EIF2S2 (ENSACCG00020002819) RALY (ENSACCG00020002798) ENSACCG00020002769 CHMP4B (ENSACCG00020002728) ZNF341 (ENSACCG00020002715) PXMP4 (ENSACCG00020002694) E2F1 (ENSACCG00020002681) ENSACCG00020002662 NECAB3 (ENSACCG00020002653) CBFA2T2 (ENSACCG00020002633) SNTA1 (ENSACCG00020002610) #22 TOX2 (ENSACCG00020002591) EDEM2 (ENSACCG00020002573) TRPC4AP (ENSACCG00020002473) ENSACCG00020002312 GSS (ENSACCG00020002255) ACSS2 (ENSACCG00020002220) SOGA1 (ENSACCG00020002169) PTPRT (ENSACCG00020001463) ENSACCG00020000632 MYBL2 (ENSACCG00020000610) IFT52 (ENSACCG00020000543) SGK2 (ENSACCG00020000501) SLC32A1 (ENSACCG00020000471) ARHGAP40 (ENSACCG00020000449) ENSACCG00020000427 Kakapo MODERN SPECIES 5 MMP24 (ENSSHBG00005009131) DYNLRB1 (ENSSHBG00005009106) ITCH (ENSSHBG00005009097) AHCY (ENSSHBG00005009088) ASIP (ENSSHBG00005009077) EIF2S2 (ENSSHBG00005009063) RALY (ENSSHBG00005009054) ENSSHBG00005009032 CHMP4B (ENSSHBG00005009015) ZNF341 (ENSSHBG00005008883) PXMP4 (ENSSHBG00005008859) E2F1 (ENSSHBG00005008851) ACTL10 (ENSSHBG00005008845) NECAB3 (ENSSHBG00005008836) CBFA2T2 (ENSSHBG00005008694) SNTA1 (ENSSHBG00005008668) #22 TOX2 (ENSSHBG00005008660) EDEM2 (ENSSHBG00005008654) TRPC4AP (ENSSHBG00005008644) ENSSHBG00005008524 GSS (ENSSHBG00005008492) ACSS2 (ENSSHBG00005008484) SOGA1 (ENSSHBG00005008471) ENSSHBG00005008462 ENSSHBG00005008453 EMILIN3 (ENSSHBG00005008424) LPIN3 (ENSSHBG00005008414) ZHX3 (ENSSHBG00005008409) PLCG1 (ENSSHBG00005007241) TOP1 (ENSSHBG00005006987) MAFB (ENSSHBG00005006969) African ostrich DUPLICATION African ostrich MODERN SPECIES 740 ENSSCUG00000012193 #22 ENSSCUG00000012196 #22 TOX2 (ENSSCUG00000012201) EDEM2 (ENSSCUG00000012208) TRPC4AP (ENSSCUG00000012213) ENSSCUG00000012492 GSS (ENSSCUG00000013101) ACSS2 (ENSSCUG00000013104) African ostrich MODERN SPECIES 740 ENSSCUG00000012193 #22 ENSSCUG00000012196 #22 TOX2 (ENSSCUG00000012201) EDEM2 (ENSSCUG00000012208) TRPC4AP (ENSSCUG00000012213) ENSSCUG00000012492 GSS (ENSSCUG00000013101) ACSS2 (ENSSCUG00000013104) Australian saltwater crocodile MODERN SPECIES 41 DYNLRB1 (ENSCPRG00005012837) ITCH (ENSCPRG00005012830) AHCY (ENSCPRG00005012824) ASIP (ENSCPRG00005012814) EIF2S2 (ENSCPRG00005012797) RALY (ENSCPRG00005012788) ENSCPRG00005012778 CHMP4B (ENSCPRG00005012772) ZNF341 (ENSCPRG00005012761) PXMP4 (ENSCPRG00005012758) E2F1 (ENSCPRG00005012754) ACTL10 (ENSCPRG00005012747) ENSCPRG00005012740 NECAB3 (ENSCPRG00005012733) CBFA2T2 (ENSCPRG00005012718) SNTA1 (ENSCPRG00005012705) #22 TOX2 (ENSCPRG00005012700) ENSCPRG00005012691 ENSCPRG00005012655 EDEM2 (ENSCPRG00005012648) TRPC4AP (ENSCPRG00005012634) ENSCPRG00005012542 ENSCPRG00005012528 ENSCPRG00005012521 ENSCPRG00005012518 MYBL2 (ENSCPRG00005012490) IFT52 (ENSCPRG00005012475) SGK2 (ENSCPRG00005012467) ARHGAP40 (ENSCPRG00005012456) ENSCPRG00005012455 ACTR5 (ENSCPRG00005012453) Anura ANCESTRAL SPECIES 50 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000176173 ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a.d ENSGT00950000183131.a.c ENSGT01070000255540 ENSGT00950000183176.a ENSGT00390000018558 ENSGT00950000182863.A.a.b #22 ENSGT00940000168101.a ENSGT00940000158764 ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 Frog MODERN SPECIES 1 ahcy (ENSXETG00000019486) dynlrb1 (ENSXETG00000019475) eif2s2 (ENSXETG00000019507) asip (ENSXETG00000044164) raly (ENSXETG00000019514) ENSXETG00000045900 chmp4b (ENSXETG00000043359) znf341 (ENSXETG00000021426) pxmp4 (ENSXETG00000042606) e2f1 (ENSXETG00000046118) ENSXETG00000037342 ENSXETG00000031462 cbfa2t2 (ENSXETG00000021431) pigt (ENSXETG00000021432) ENSXETG00000034447 snta1 (ENSXETG00000021433) #22 tigd3 (ENSXETG00000034340) tox2 (ENSXETG00000021435) ralgapb (ENSXETG00000021438) ENSXETG00000038070 chd6 (ENSXETG00000021445) rbl1 (ENSXETG00000007414) ENSXETG00000045039 ENSXETG00000038789 ENSXETG00000046162 samhd1 (ENSXETG00000007416) ENSXETG00000040827 ergic3 (ENSXETG00000007419) mgc145685 (ENSXETG00000030107) ENSXETG00000039719 st3gal2.2 (ENSXETG00000007422) Leishan spiny toad MODERN SPECIES 3 SS18L1 (ENSLLEG00000030159) PSMA7 (ENSLLEG00000030206) ENSLLEG00000030338 TAF4 (ENSLLEG00000030383) CDH4 (ENSLLEG00000014748) ENSLLEG00000017422 ENSLLEG00000017493 CDH26 (ENSLLEG00000018521) FAM217B (ENSLLEG00000019972) PPP1R3D (ENSLLEG00000020009) PHACTR3 (ENSLLEG00000020053) EDN3 (ENSLLEG00000020159) ENSLLEG00000020215 ENSLLEG00000020282 PRELID3B (ENSLLEG00000020377) SNTA1 (ENSLLEG00000020660) #22 ENSLLEG00000020769 TOX2 (ENSLLEG00000020800) RALGAPB (ENSLLEG00000021136) CHD6 (ENSLLEG00000021568) RBL1 (ENSLLEG00000022085) ENSLLEG00000022468 ENSLLEG00000023541 ERGIC3 (ENSLLEG00000023746) ENSLLEG00000023988 ENSLLEG00000024093 ENSLLEG00000024348 ENSLLEG00000024396 ENSLLEG00000024707 CPNE1 (ENSLLEG00000024748) ENSLLEG00000025037 Coelacanth MODERN SPECIES 961 ENSLACG00000002082 CHMP4B (ENSLACG00000005330) ZNF341 (ENSLACG00000006139) PXMP4 (ENSLACG00000006704) E2F1 (ENSLACG00000006930) NECAB3 (ENSLACG00000008280) CBFA2T2 (ENSLACG00000009564) SNTA1 (ENSLACG00000010986) #22 ENSLACG00000011487 TOX2 (ENSLACG00000012232) Actinopterygii ANCESTRAL SPECIES 62 ENSGT00940000159472 ENSGT00390000001562 ENSGT00390000000546 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000155581.A ENSGT00940000158764 ENSGT00700000104550.a.j ENSGT00940000159925 ENSGT00940000160093 ENSGT00940000159329 ENSGT00390000000732 ENSGT00940000156407 ENSGT00940000162635 ENSGT00950000182970.A.b ENSGT01030000234597.a.b.b.f ENSGT00410000025596.a.a ENSGT00940000160694 ENSGT00950000183149.B ENSGT00940000158197 Reedfish MODERN SPECIES 1 ENSECRG00000007998 osbp (ENSECRG00000007946) patl1 (ENSECRG00000007912) cebpb (ENSECRG00000007895) peds1 (ENSECRG00000007882) ube2v1 (ENSECRG00000007775) tcf15 (ENSECRG00000007740) itcha (ENSECRG00000007713) VSTM2L (ENSECRG00000007701) ctnnbl1 (ENSECRG00000007678) cbfa2t2 (ENSECRG00000007661) znf341 (ENSECRG00000007631) pxmp4 (ENSECRG00000007618) E2F1 (ENSECRG00000007605) ENSECRG00000007598 SNTA1 (ENSECRG00000007587) #22 tox2 (ENSECRG00000007562) TIMM10B (ENSECRG00000007555) RALGAPB (ENSECRG00000007540) PREX1 (ENSECRG00000007494) kcnq2a (ENSECRG00000007454) chrna4b (ENSECRG00000006928) zgpat (ENSECRG00000006855) arfrp1 (ENSECRG00000006843) TNFRSF6B (ENSECRG00000006833) dtx4a (ENSECRG00000006825) ENSECRG00000006811 ENSECRG00000006800 ENSECRG00000006793 ENSECRG00000006783 ENSECRG00000006773 Neopterygii ANCESTRAL SPECIES 44 ENSGT00940000165533 ENSGT01050000244866.B.c.a ENSGT00940000162507.B ENSGT01050000244866.B.c.b ENSGT00950000183094.b.a ENSGT00390000009748 ENSGT00940000159381 ENSGT00390000006931 ENSGT01050000244866.D.b.a ENSGT00940000159472 ENSGT00390000001562 ENSGT00390000000546 ENSGT00940000157014 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000155581.A ENSGT00940000158764 ENSGT00700000104550.a.j ENSGT00940000159925 ENSGT00940000160093 ENSGT00940000159329 ENSGT00390000000732 ENSGT00940000156407 ENSGT00940000162635 ENSGT00950000182970.A.b ENSGT01030000234597.a.b.b.f ENSGT00410000025596.a.a ENSGT00940000160694.g ENSGT00940000160694.h ENSGT00950000183149.B Spotted gar MODERN SPECIES 656 ENSLOCG00000001261 DLGAP4 (ENSLOCG00000001238) ENSLOCG00000001193 tgm2b (ENSLOCG00000001167) rprd1b (ENSLOCG00000001144) TTI1 (ENSLOCG00000001130) VSTM2L (ENSLOCG00000001095) ctnnbl1 (ENSLOCG00000001069) tgm5l (ENSLOCG00000001036) E2F1 (ENSLOCG00000001016) pxmp4 (ENSLOCG00000000996) znf341 (ENSLOCG00000000947) itcha (ENSLOCG00000000888) NECAB3 (ENSLOCG00000000865) cbfa2t2 (ENSLOCG00000000816) SNTA1 (ENSLOCG00000000786) #22 ENSLOCG00000000750 tox2 (ENSLOCG00000000720) ENSLOCG00000000690 RALGAPB (ENSLOCG00000000654) Osteoglossocephalai ANCESTRAL SPECIES 67 ENSGT00940000165533 ENSGT01050000244866.B.c.a ENSGT00940000162507.B ENSGT01050000244866.B.c.b ENSGT00950000183094.b.a ENSGT00390000009748 ENSGT00940000159381 ENSGT00390000006931 ENSGT01050000244866.D.b.a ENSGT00940000159472 ENSGT00390000001562 ENSGT00390000000546 ENSGT00940000157014 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764 ENSGT00700000104550.a.j.b ENSGT00940000159925 ENSGT00940000160093.b ENSGT00940000159329 ENSGT00390000000732 ENSGT00940000155167.a ENSGT00940000162635 ENSGT00950000182970.A.b ENSGT01030000234597.a.b.b.f ENSGT00410000025596.a.a ENSGT00940000160694.g.a ENSGT00940000163473.j ENSGT00530000063106.A ENSGT00940000160694.h Osteoglossiformes ANCESTRAL SPECIES 17 ENSGT01010000223084 ENSGT00390000000903.b.a ENSGT00390000016807.b ENSGT00940000160046 ENSGT00940000155458.c.a ENSGT00940000155230.b.b.b.a ENSGT00940000155308.d ENSGT00940000165533.a ENSGT01050000244866.B.c.a ENSGT00950000183094.b.a.p ENSGT00940000159381.b ENSGT01050000244866.D.b.a ENSGT00940000157014.h ENSGT00950000183131.a.f ENSGT00950000183176.a.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.e ENSGT00700000104550.a.j.a.b ENSGT00700000104550.a.j.a.a ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f.h ENSGT00410000025596.a.a ENSGT00940000160694.g.a ENSGT00940000160694.h ENSGT00950000183149.B.b ENSGT00390000006008 ENSGT00940000155094.a Asian bonytongue MODERN SPECIES 14 myl9b (ENSSFOG00015019678) ENSSFOG00015019684 DLGAP4 (ENSSFOG00015019695) ENSSFOG00015031459 ENSSFOG00015032394 ENSSFOG00015019751 ENSSFOG00015019791 tgm2b (ENSSFOG00015019841) rprd1b (ENSSFOG00015019874) VSTM2L (ENSSFOG00015019919) tgm5l (ENSSFOG00015019930) ITCH (ENSSFOG00015019968) ENSSFOG00015025239 ENSSFOG00015031799 cbfa2t2 (ENSSFOG00015020083) SNTA1 (ENSSFOG00015020141) #22 tox2 (ENSSFOG00015020204) RALGAPB (ENSSFOG00015020305) KCNQ2 (ENSSFOG00015020469) CHRNA4 (ENSSFOG00015020486) arfrp1 (ENSSFOG00015020500) STMN3 (ENSSFOG00015020531) GMEB2 (ENSSFOG00015020551) HELZ2 (ENSSFOG00015020580) ENSSFOG00015020597 ENSSFOG00015020601 ENSSFOG00015020619 HESX1 (ENSSFOG00015020712) il17rd (ENSSFOG00015020761) arhgef3 (ENSSFOG00015032625) TASOR (ENSSFOG00015020843) P. kingsleyae MODERN SPECIES 308 ENSPKIG00000010064 tpra1 (ENSPKIG00000010098) LPIN3 (ENSPKIG00000010167) myl9b (ENSPKIG00000010247) ENSPKIG00000010277 DLGAP4 (ENSPKIG00000010318) tgm2b (ENSPKIG00000010396) RPRD1B (ENSPKIG00000010430) VSTM2L (ENSPKIG00000010454) tgm5l (ENSPKIG00000010469) ITCH (ENSPKIG00000010515) cbfa2t2 (ENSPKIG00000010565) SNTA1 (ENSPKIG00000010628) #22 tox2 (ENSPKIG00000010730) RALGAPB (ENSPKIG00000010870) Clupeocephala ANCESTRAL SPECIES 198 ENSGT01050000244850.A.b.b ENSGT00390000000903.b.a ENSGT00390000016807 ENSGT00940000165151.b ENSGT00940000160046 ENSGT00940000155458 ENSGT00940000159849 ENSGT00940000155308.d ENSGT00940000165533.c ENSGT01050000244866.B.c.a ENSGT00940000159381.d ENSGT00390000001562 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 Otomorpha ANCESTRAL SPECIES 179 ENSGT00390000000903.b.a ENSGT00390000016807 ENSGT00940000165151.b ENSGT00940000160046 ENSGT00940000155458.e.a ENSGT00940000159849 ENSGT00940000155308.d ENSGT00940000165533.c ENSGT01050000244866.B.c.a ENSGT00940000159381.d ENSGT01050000244866.D.b.a ENSGT00390000001562 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000163999.a ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a ENSGT00530000063106.A.s.a.b Clupeiformes ANCESTRAL SPECIES 140 ENSGT00390000000903.b.a ENSGT00390000016807 ENSGT00940000165151.b ENSGT00940000160046 ENSGT00940000155458.e.a ENSGT00940000159849 ENSGT00940000155308.d ENSGT00940000165533.c ENSGT01050000244866.B.c.a ENSGT00940000159381.d ENSGT01050000244866.D.b.a ENSGT00390000001562 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000163999.a ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a Atlantic herring MODERN SPECIES 21 SLC41A3 (ENSCHAG00000018620) CHST13 (ENSCHAG00000018788) txnrd3 (ENSCHAG00000018885) PLXNA1 (ENSCHAG00000021732) CHCHD6 (ENSCHAG00000021993) ENSCHAG00000022005 DLGAP4 (ENSCHAG00000022019) quo (ENSCHAG00000022027) ENSCHAG00000022089 VSTM2L (ENSCHAG00000022093) tgm5l (ENSCHAG00000022099) pxmp4 (ENSCHAG00000022119) itcha (ENSCHAG00000022207) NECAB3 (ENSCHAG00000024178) cbfa2t2 (ENSCHAG00000024199) SNTA1 (ENSCHAG00000024405) #22 tox2 (ENSCHAG00000024410) RALGAPB (ENSCHAG00000024451) KCNQ2 (ENSCHAG00000024632) CHRNA4 (ENSCHAG00000024836) arfrp1 (ENSCHAG00000024895) STMN3 (ENSCHAG00000024912) HELZ2 (ENSCHAG00000024918) ENSCHAG00000024931 ENSCHAG00000024935 stk35l (ENSCHAG00000024947) bin2b (ENSCHAG00000024959) ENSCHAG00000025002 TEX264 (ENSCHAG00000025008) grm2b (ENSCHAG00000025014) rrp9 (ENSCHAG00000025036) Denticle herring MODERN SPECIES 3 chchd6b (ENSDCDG00000035423) tpra1 (ENSDCDG00000035427) ENSDCDG00000035453 ENSDCDG00000035459 myl9b (ENSDCDG00000035461) ENSDCDG00000035462 DLGAP4 (ENSDCDG00000035463) quo (ENSDCDG00000035467) tgm2b (ENSDCDG00000035483) ENSDCDG00000035511 tgm5l (ENSDCDG00000015020) pxmp4 (ENSDCDG00000015025) itcha (ENSDCDG00000015061) NECAB3 (ENSDCDG00000015678) cbfa2t2 (ENSDCDG00000015692) SNTA1 (ENSDCDG00000016443) #22 tlr22 (ENSDCDG00000016451) tox2 (ENSDCDG00000016457) RALGAPB (ENSDCDG00000016481) KCNQ2 (ENSDCDG00000016550) ENSDCDG00000016691 arfrp1 (ENSDCDG00000016693) STMN3 (ENSDCDG00000016696) HELZ2 (ENSDCDG00000016701) ENSDCDG00000016704 csrp1b (ENSDCDG00000016707) tnni1b (ENSDCDG00000016712) ENSDCDG00000016714 ENSDCDG00000016717 ENSDCDG00000016719 tead3b (ENSDCDG00000016722) Otophysi ANCESTRAL SPECIES 15 ENSGT00950000182905.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923.a ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000169138 ENSGT00940000155052 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00940000163999.a.q.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a ENSGT00940000161293 ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000159439.b ENSGT00390000003427 ENSGT00530000064137.a.a ENSGT00390000006305 ENSGT00550000075017 ENSGT00950000182860.a.b.a Characiphysae ANCESTRAL SPECIES 2 ENSGT00950000182905.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923.a ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000169138 ENSGT00940000155052 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00940000163999.a.q.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a ENSGT00940000161293 ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000159439.b ENSGT00390000003427 ENSGT00530000064137.a.a ENSGT00390000006305 ENSGT00550000075017 ENSGT00950000182860.a.b.a Channel catfish MODERN SPECIES 2 cyp24a1 (ENSIPUG00000024718) eya2 (ENSIPUG00000024710) GCNT7 (ENSIPUG00000024707) rtfdc1 (ENSIPUG00000024705) GCNT7 (ENSIPUG00000024693) tfap2c (ENSIPUG00000024691) Cdh22 (ENSIPUG00000024673) ZNFX1 (ENSIPUG00000024633) ddx27 (ENSIPUG00000024627) ENSIPUG00000024575 ENSIPUG00000024573 SNRPB (ENSIPUG00000024569) itcha (ENSIPUG00000024557) NECAB3 (ENSIPUG00000024550) CBFA2T2 (ENSIPUG00000024542) SNTA1 (ENSIPUG00000024538) #22 tox2 (ENSIPUG00000024534) ralgapb (ENSIPUG00000024505) kcnq2 (ENSIPUG00000024496) arfrp1 (ENSIPUG00000024487) STMN3 (ENSIPUG00000024484) sp7 (ENSIPUG00000024425) igsf8 (ENSIPUG00000024424) soat2 (ENSIPUG00000024423) ENSIPUG00000024422 kif5a (ENSIPUG00000024421) dctn2 (ENSIPUG00000024417) mbd6 (ENSIPUG00000024415) ddit3 (ENSIPUG00000024414) mars1 (ENSIPUG00000024413) mars1 (ENSIPUG00000024410) Characiphysae_b ANCESTRAL SPECIES ENSGT00940000160725 ENSGT00950000182905.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923.a ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000155052 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00940000163999.a.q.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a.a ENSGT00940000161293 ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000159439.b ENSGT01080000258228 ENSGT00940000154801.n.a ENSGT00390000003427 ENSGT00530000064137.a.a ENSGT00390000006305 Characoidei ANCESTRAL SPECIES ENSGT00940000160725 ENSGT00950000182905.b ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923.a ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000155052 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00940000163999.a.q.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a.a ENSGT00940000161293 ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000159439.b ENSGT01080000258228 ENSGT01030000234812.b ENSGT00390000003427 ENSGT00530000064137.a.a ENSGT00390000006305 Mexicana tetra MODERN SPECIES 4 ENSAMXG00000039646 cyp24a1 (ENSAMXG00000000873) eya2 (ENSAMXG00000041270) rtf2 (ENSAMXG00000000890) GCNT7 (ENSAMXG00000043986) tfap2c (ENSAMXG00000037066) CDH22 (ENSAMXG00000000906) ENSAMXG00000033717 ZNFX1 (ENSAMXG00000000907) ddx27 (ENSAMXG00000000911) snrpb (ENSAMXG00000029434) itcha (ENSAMXG00000000916) ENSAMXG00000034759 ENSAMXG00000043347 cbfa2t2 (ENSAMXG00000000928) SNTA1 (ENSAMXG00000000933) #22 tox2 (ENSAMXG00000041393) RALGAPB (ENSAMXG00000000938) KCNQ2 (ENSAMXG00000034237) arfrp1 (ENSAMXG00000042798) STMN3 (ENSAMXG00000017478) HELZ2 (ENSAMXG00000017465) sp7 (ENSAMXG00000029881) igsf8 (ENSAMXG00000033883) soat2 (ENSAMXG00000042964) KIF5A (ENSAMXG00000017425) ENSAMXG00000034826 ENSAMXG00000041097 dctn2 (ENSAMXG00000017402) ENSAMXG00000017377 ddit3 (ENSAMXG00000037250) Red-bellied piranha MODERN SPECIES 108 ENSPNAG00000015682 cyp24a1 (ENSPNAG00000015742) eya2 (ENSPNAG00000015768) GCNT7 (ENSPNAG00000015771) rtf2 (ENSPNAG00000015828) tfap2c (ENSPNAG00000015865) CDH22 (ENSPNAG00000015917) ZNFX1 (ENSPNAG00000015929) ddx27 (ENSPNAG00000016043) ENSPNAG00000016072 snrpb (ENSPNAG00000016126) itcha (ENSPNAG00000016159) NECAB3 (ENSPNAG00000016177) cbfa2t2 (ENSPNAG00000016228) ENSPNAG00000016266 SNTA1 (ENSPNAG00000016280) #22 tox2 (ENSPNAG00000016289) RALGAPB (ENSPNAG00000016572) KCNQ2 (ENSPNAG00000016721) arfrp1 (ENSPNAG00000003438) STMN3 (ENSPNAG00000016784) ENSPNAG00000016859 sp7 (ENSPNAG00000016870) igsf8 (ENSPNAG00000016880) soat2 (ENSPNAG00000016902) ENSPNAG00000016915 ENSPNAG00000016933 KIF5A (ENSPNAG00000016976) ENSPNAG00000016990 dctn2 (ENSPNAG00000017051) ENSPNAG00000017128 Electric eel MODERN SPECIES 44 cyp24a1 (ENSEEEG00000007760) eya2 (ENSEEEG00000007761) rtf2 (ENSEEEG00000007762) GCNT7 (ENSEEEG00000007766) tfap2c (ENSEEEG00000007781) CDH22 (ENSEEEG00000007783) ENSEEEG00000007786 ZNFX1 (ENSEEEG00000007788) ddx27 (ENSEEEG00000007816) snrpb (ENSEEEG00000007833) ENSEEEG00000007834 itcha (ENSEEEG00000007878) ENSEEEG00000008745 ENSEEEG00000008749 cbfa2t2 (ENSEEEG00000008752) SNTA1 (ENSEEEG00000008756) #22 tox2 (ENSEEEG00000008762) RALGAPB (ENSEEEG00000008773) KCNQ2 (ENSEEEG00000008785) arfrp1 (ENSEEEG00000008789) STMN3 (ENSEEEG00000008795) ENSEEEG00000008818 ENSEEEG00000008821 ENSEEEG00000008819 sp7 (ENSEEEG00000008822) igsf8 (ENSEEEG00000008823) soat2 (ENSEEEG00000008825) ENSEEEG00000008833 ENSEEEG00000008943 dctn2 (ENSEEEG00000008944) ENSEEEG00000008945 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000165387.b ENSGT00950000182932.C.a ENSGT00950000182905.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923.a ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT00940000155052 ENSGT00940000157014.f.e ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00940000163999.a.q.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 9 ENSGT00950000182848.c.b.a.b.a ENSGT00940000159376.a ENSGT00940000155154.b.q ENSGT00950000182848.c.b.a.b.b ENSGT00940000159376.b ENSGT00940000155154.b.r ENSGT00550000074997 ENSGT00940000155052.j ENSGT01100000264229 ENSGT00940000155052.i ENSGT00940000157014.f.e.a ENSGT00940000157014.f.e.b ENSGT00950000183131.a.f ENSGT00950000183176.a.c ENSGT00940000163999.a.q.a.a.b ENSGT00950000182863.A.a.b.e #22 ENSGT00940000158764.g.e.b ENSGT00940000160093.a.c.a ENSGT00940000156407.h ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a.c.a ENSGT00940000161293.b ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000154801.n.a ENSGT00390000003427.c ENSGT00530000064137.a.a.d ENSGT00390000006305.k ENSGT00550000075017.c ENSGT00950000182860.a.b.a.a ENSGT00940000168625.b Cyprininae_a ANCESTRAL SPECIES 135 ENSGT00880000138014.b.g.a ENSGT00530000064134.a.b.a ENSGT00940000165387.b.a ENSGT00950000182905.b.c ENSGT00950000182978.A.a.b.b.a ENSGT00390000010923.a.b ENSGT00940000160402.h ENSGT00950000182848.c.b.a.b.a ENSGT00940000159376.a ENSGT00940000155154.b.q ENSGT00550000074997 ENSGT00940000155052.j ENSGT00940000155052.i ENSGT00940000157014.f.e.a ENSGT00950000183176.a.c ENSGT00950000182863.A.a.b.e #22 ENSGT00940000158764.g.e.b ENSGT00940000163999.a.q.a.a.b ENSGT00940000158764.g.e.a.b ENSGT00700000104550.a.j.b.f ENSGT00940000160093.a.c.a ENSGT00940000156407.h ENSGT01030000234597.a.b.b.f ENSGT00940000160694.g.a.c.a ENSGT00940000161293.b ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00940000154801.n.a ENSGT00390000003427.d ENSGT00530000064137.a.a.c ENSGT00390000006305.l Common carp reference MODERN SPECIES 16 ENSCCRG00000074266 ENSCCRG00000065108 ENSCCRG00000017237 ENSCCRG00000023822 cyp24a1 (ENSCCRG00000023843) eya2 (ENSCCRG00000024424) RTF2 (ENSCCRG00000068196) ENSCCRG00000077215 tfap2c (ENSCCRG00000041114) ENSCCRG00000001233 ENSCCRG00000067854 snrpb (ENSCCRG00000051019) itcha (ENSCCRG00000014923) NECAB3 (ENSCCRG00000054016) cbfa2t2 (ENSCCRG00000012347) SNTA1 (ENSCCRG00000076916) #22 ENSCCRG00000054132 tox2 (ENSCCRG00000018061) ENSCCRG00000015212 ENSCCRG00000075587 arfrp1 (ENSCCRG00000081525) ENSCCRG00000075715 sp7 (ENSCCRG00000000263) igsf8 (ENSCCRG00000009398) soat2 (ENSCCRG00000041670) ENSCCRG00000041739 dctn2 (ENSCCRG00000041698) ddit3 (ENSCCRG00000056475) mars1 (ENSCCRG00000041762) ARHGAP9 (ENSCCRG00000001377) ENSCCRG00000081050 Golden-line barbel MODERN SPECIES 93 ENSSGRG00000025020 ENSSGRG00000025556 cyp24a1 (ENSSGRG00000025569) eya2 (ENSSGRG00000025868) rtf2 (ENSSGRG00000025870) GCNT7 (ENSSGRG00000025902) tfap2c (ENSSGRG00000025906) CDH22 (ENSSGRG00000025909) ZNFX1 (ENSSGRG00000025916) ddx27 (ENSSGRG00000025946) snrpb (ENSSGRG00000026026) ENSSGRG00000026090 itcha (ENSSGRG00000026091) NECAB3 (ENSSGRG00000026092) cbfa2t2 (ENSSGRG00000026102) SNTA1 (ENSSGRG00000026107) #22 tox2 (ENSSGRG00000026111) Goldfish MODERN SPECIES 24 gnb1b (ENSCARG00000022932) C3orf18 (ENSCARG00000022926) ENSCARG00000022923 mst1 (ENSCARG00000022805) abhd14b (ENSCARG00000022781) cacna2d2a (ENSCARG00000022711) GCNT7 (ENSCARG00000022690) CDH22 (ENSCARG00000022673) ZNFX1 (ENSCARG00000022603) ENSCARG00000022585 snrpb (ENSCARG00000022573) itcha (ENSCARG00000021657) NECAB3 (ENSCARG00000021597) cbfa2t2 (ENSCARG00000020957) ENSCARG00000020928 SNTA1 (ENSCARG00000020840) #22 tox2 (ENSCARG00000020808) RALGAPB (ENSCARG00000020509) KCNQ2 (ENSCARG00000019147) arfrp1 (ENSCARG00000019082) STMN3 (ENSCARG00000019075) ENSCARG00000019070 ENSCARG00000019063 ENSCARG00000019046 sp7 (ENSCARG00000019038) igsf8 (ENSCARG00000019035) soat2 (ENSCARG00000019007) dctn2 (ENSCARG00000018917) ENSCARG00000018906 ddit3 (ENSCARG00000018899) mars1 (ENSCARG00000017742) Cyprininae ANCESTRAL SPECIES 1018 ENSGT00950000183176.a.d ENSGT00940000163999.a.q.a.a.a ENSGT00950000182863.A.a.b.f #22 ENSGT00940000158764.g.e.a.a Goldfish MODERN SPECIES 46 tubgcp5 (ENSCARG00000001370) cyfip1 (ENSCARG00000001456) ENSCARG00000001508 nipa2 (ENSCARG00000001511) HERC2 (ENSCARG00000001529) OCA2 (ENSCARG00000001801) ENSCARG00000002039 CDH22 (ENSCARG00000002090) ZNFX1 (ENSCARG00000002236) ddx27 (ENSCARG00000002449) snrpb (ENSCARG00000002471) ENSCARG00000002479 itcha (ENSCARG00000002538) NECAB3 (ENSCARG00000002973) cbfa2t2 (ENSCARG00000002995) SNTA1 (ENSCARG00000003112) #22 ENSCARG00000003132 tox2 (ENSCARG00000003149) ENSCARG00000003176 RALGAPB (ENSCARG00000003202) KCNQ2 (ENSCARG00000003265) arfrp1 (ENSCARG00000003800) STMN3 (ENSCARG00000003822) ENSCARG00000003832 ENSCARG00000003906 ENSCARG00000004113 sp7 (ENSCARG00000004131) igsf8 (ENSCARG00000004141) ENSCARG00000004168 dctn2 (ENSCARG00000004281) ENSCARG00000004499 Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00880000138014.b.g.b ENSGT00530000064134.a.b.b ENSGT00940000165387.b.b ENSGT00950000182932.C.a ENSGT00950000182905.b.d ENSGT00950000182978.A.a.b.b.b ENSGT00390000010923.a.a ENSGT00940000160402.g ENSGT00950000182848.c.b.a.b.b ENSGT00940000159376.b ENSGT00940000155154.b.r ENSGT00940000157014.f.e.b ENSGT00950000183131.a.f ENSGT00950000183176.a.d ENSGT00940000163999.a.q.a.a.a ENSGT00950000182863.A.a.b.f #22 ENSGT00940000158764.g.e.a.a Common carp reference MODERN SPECIES 10 ctsa (ENSCCRG00000026540) ncoa5 (ENSCCRG00000024756) ENSCCRG00000065969 cyp24a1 (ENSCCRG00000027418) eya2 (ENSCCRG00000027542) GCNT7 (ENSCCRG00000041154) rtf2 (ENSCCRG00000035552) tfap2c (ENSCCRG00000058789) ENSCCRG00000036157 ENSCCRG00000067473 ddx27 (ENSCCRG00000064501) itcha (ENSCCRG00000053905) NECAB3 (ENSCCRG00000013575) cbfa2t2 (ENSCCRG00000013531) ENSCCRG00000075134 SNTA1 (ENSCCRG00000080321) #22 tox2 (ENSCCRG00000068710) ENSCCRG00000065476 ENSCCRG00000054670 ENSCCRG00000000298 ENSCCRG00000081112 ENSCCRG00000068371 sp7 (ENSCCRG00000009400) ENSCCRG00000068201 dctn2 (ENSCCRG00000075980) ENSCCRG00000041216 ddit3 (ENSCCRG00000041750) ENSCCRG00000016542 mars1 (ENSCCRG00000057358) ARHGAP9 (ENSCCRG00000056214) ENSCCRG00000072309 Golden-line barbel MODERN SPECIES 484 CDH22 (ENSSGRG00000027703) ZNFX1 (ENSSGRG00000027634) ddx27 (ENSSGRG00000027040) snrpb (ENSSGRG00000027019) itcha (ENSSGRG00000027009) cbfa2t2 (ENSSGRG00000027003) ENSSGRG00000027002 ENSSGRG00000027001 #22 tox2 (ENSSGRG00000026999) RALGAPB (ENSSGRG00000026621) Zebrafish MODERN SPECIES 21 ncoa5 (ENSDARG00000016345) ENSDARG00000075815 ENSDARG00000077028 cyp24a1 (ENSDARG00000103277) eya2 (ENSDARG00000018984) rtf2 (ENSDARG00000040607) GCNT7 (ENSDARG00000040608) tfap2c (ENSDARG00000040606) CDH22 (ENSDARG00000098824) ZNFX1 (ENSDARG00000100280) ddx27 (ENSDARG00000091831) snrpb (ENSDARG00000011125) itcha (ENSDARG00000074903) NECAB3 (ENSDARG00000074794) cbfa2t2 (ENSDARG00000074337) SNTA1 (ENSDARG00000098420) #22 tox2 (ENSDARG00000100055) RALGAPB (ENSDARG00000088899) KCNQ2 (ENSDARG00000091130) ENSDARG00000087071 arfrp1 (ENSDARG00000057857) STMN3 (ENSDARG00000038465) ENSDARG00000016527 sp7 (ENSDARG00000019516) igsf8 (ENSDARG00000038467) soat2 (ENSDARG00000059824) ENSDARG00000059818 dctn2 (ENSDARG00000031388) ENSDARG00000086980 ddit3 (ENSDARG00000059836) mars1 (ENSDARG00000034396) Euteleosteomorpha ANCESTRAL SPECIES 16 ENSGT00940000155052 ENSGT00940000169138 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00700000104550.a.j.b ENSGT00940000160093.a ENSGT00940000156407 ENSGT00940000166655 ENSGT00940000158197.c ENSGT00390000006008 ENSGT00940000155094.a ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a ENSGT00940000178369 ENSGT00940000163348 ENSGT00390000012914 ENSGT00940000159430 ENSGT00390000004215.a.b.a Protacanthopterygii ANCESTRAL SPECIES 31 ENSGT00730000111020.b.b ENSGT00940000155052 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923.d ENSGT00940000160402 ENSGT00390000010923.c ENSGT00950000182978.A.a.b.b.c ENSGT00390000001562 ENSGT00940000157014.f ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000156407 ENSGT00940000166655 ENSGT01030000234597.a.b.b.f.i ENSGT00940000160694.g.a ENSGT00940000158197.c ENSGT00390000006008 ENSGT00940000155094.a ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a ENSGT00940000163348 ENSGT00390000012914 ENSGT00940000159430 ENSGT00390000004215.a.b.a Northern pike MODERN SPECIES 16 ddx27 (ENSELUG00000014535) ZNFX1 (ENSELUG00000014505) ENSELUG00000031016 CDH22 (ENSELUG00000014454) tfap2c (ENSELUG00000014423) rtf2 (ENSELUG00000014386) GCNT7 (ENSELUG00000014370) ENSELUG00000014363 eya2 (ENSELUG00000014341) ENSELUG00000014263 tgm5l (ENSELUG00000000519) pxmp4 (ENSELUG00000001547) itcha (ENSELUG00000014154) NECAB3 (ENSELUG00000014035) cbfa2t2 (ENSELUG00000013949) SNTA1 (ENSELUG00000013871) #22 tox2 (ENSELUG00000013810) ENSELUG00000028964 RALGAPB (ENSELUG00000013702) KCNQ2 (ENSELUG00000013558) CHRNA4 (ENSELUG00000013441) ENSELUG00000013426 arfrp1 (ENSELUG00000013412) ENSELUG00000031880 STMN3 (ENSELUG00000028288) ENSELUG00000034691 HELZ2 (ENSELUG00000013322) stk35l (ENSELUG00000013284) FNDC11 (ENSELUG00000013250) ENSELUG00000013234 ENSELUG00000013216 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 130 ENSGT00940000153725.a.a ENSGT00730000111020.b.b.d ENSGT00940000155052 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b.s ENSGT00940000159376.c ENSGT00950000182848.c.b.a.b.f ENSGT00940000160402.a ENSGT00390000010923.c ENSGT00950000182978.A.a.b.b.c ENSGT00390000001562 ENSGT00940000157014.f.d ENSGT00950000183131.a.f.m.a ENSGT00950000183176.a.h.b ENSGT00950000182863.A.a.b.g.a #22 ENSGT00940000158764.g.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000160093.a.b ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000156407.a ENSGT00940000166655.i ENSGT01030000234597.a.b.b.f.i.b ENSGT00940000160694.g.a ENSGT00940000158197.c.e ENSGT00390000006008 ENSGT00940000155094.a.c ENSGT01030000234623.a.a.a.a.a.e ENSGT00940000163348 ENSGT00390000012914.k.a ENSGT00940000159430.d Huchen MODERN SPECIES 1044 SNTA1 (ENSHHUG00000046625) #22 tox2 (ENSHHUG00000046624) tox2 (ENSHHUG00000046618) ENSHHUG00000046616 RALGAPB (ENSHHUG00000046432) ENSHHUG00000046425 Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00940000153725.a.a ENSGT00730000111020.b.b.d ENSGT01070000254033 ENSGT00940000155052 ENSGT00550000074997 ENSGT00940000155154.b.s ENSGT00940000159376.c ENSGT00950000182848.c.b.a.b.f ENSGT00940000160402.a ENSGT00390000010923.c ENSGT00950000182978.A.a.b.b.c ENSGT00390000001562 ENSGT00940000157014.f.d ENSGT00950000183131.a.f.m.a ENSGT00950000183176.a.h.b ENSGT00950000182863.A.a.b.g.a #22 ENSGT00940000158764.g.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000160093.a.b Oncorhynchus ANCESTRAL SPECIES 72 ENSGT00730000111020.b.b.d ENSGT01070000254033 ENSGT00940000155052 ENSGT00550000074997 ENSGT00940000155154.b.s ENSGT00940000159376.c ENSGT00950000182848.c.b.a.b.f ENSGT00940000160402.a ENSGT00390000010923.c ENSGT00950000182978.A.a.b.b.c ENSGT00630000089884.B.b.a.b ENSGT00390000001562 ENSGT00940000157014.f.d ENSGT00950000183131.a.f.m.a ENSGT00950000183176.a.h.b ENSGT00950000182863.A.a.b.g.a #22 ENSGT00940000158764.g.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000160093.a.b Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT01070000254033 ENSGT00940000155052 ENSGT00550000074997 ENSGT00940000155154.b.s ENSGT00940000159376.c ENSGT00990000208694 ENSGT00950000182848.c.b.a.b.f ENSGT00940000160402.a ENSGT00390000010923.c ENSGT00950000182978.A.a.b.b.c ENSGT00630000089884.B.b.a.b ENSGT00390000001562 ENSGT00940000157014.f.d ENSGT00950000183131.a.f.m.a ENSGT00950000183176.a.h.b ENSGT00950000182863.A.a.b.g.a #22 ENSGT00940000158764.g.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000160093.a.b ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000156407.a ENSGT00940000166655.i ENSGT01030000234597.a.b.b.f.i.b ENSGT00940000160694.g.a ENSGT00940000158197.c.e ENSGT00390000006008 ENSGT00940000155094.a.c ENSGT01030000234623.a.a.a.a.a.e ENSGT00940000163348 ENSGT00390000012914.k.a ENSGT00390000004215.a.b.a.k.b Chinook salmon MODERN SPECIES 31 ZNFX1 (ENSOTSG00005022823) ENSOTSG00005022811 CDH22 (ENSOTSG00005022807) ENSOTSG00005022806 tfap2c (ENSOTSG00005022805) GCNT7 (ENSOTSG00005022803) rtf2 (ENSOTSG00005022798) ENSOTSG00005022796 eya2 (ENSOTSG00005022789) ENSOTSG00005022787 pxmp4 (ENSOTSG00005022785) itcha (ENSOTSG00005016301) ENSOTSG00005016272 cbfa2t2 (ENSOTSG00005016129) cbfa2t2 (ENSOTSG00005016127) SNTA1 (ENSOTSG00005016124) #22 tox2 (ENSOTSG00005016122) dap3 (ENSOTSG00005015992) ENSOTSG00005015985 ENSOTSG00005015984 polr3c (ENSOTSG00005015982) KCNQ2 (ENSOTSG00005015978) CHRNA4 (ENSOTSG00005015974) ENSOTSG00005015972 arfrp1 (ENSOTSG00005015970) ENSOTSG00005015969 ENSOTSG00005015968 STMN3 (ENSOTSG00005015967) HELZ2 (ENSOTSG00005015887) stk35l (ENSOTSG00005015886) FNDC11 (ENSOTSG00005015885) Rainbow trout MODERN SPECIES 28 ENSOMYG00000022689 ENSOMYG00000022664 tfap2c (ENSOMYG00000022641) ENSOMYG00000022609 rtf2 (ENSOMYG00000022594) ENSOMYG00000069743 eya2 (ENSOMYG00000022568) ENSOMYG00000029729 ENSOMYG00000022556 ENSOMYG00000022538 ENSOMYG00000060314 itcha (ENSOMYG00000015916) ENSOMYG00000065591 NECAB3 (ENSOMYG00000015492) cbfa2t2 (ENSOMYG00000015470) SNTA1 (ENSOMYG00000015456) #22 tox2 (ENSOMYG00000015425) ENSOMYG00000015288 ENSOMYG00000015095 ENSOMYG00000014804 ENSOMYG00000014736 ENSOMYG00000063827 arfrp1 (ENSOMYG00000014719) ENSOMYG00000014651 ENSOMYG00000014634 ENSOMYG00000014521 ENSOMYG00000014500 ENSOMYG00000014493 ENSOMYG00000067948 ENSOMYG00000014483 ENSOMYG00000056252 Salmo ANCESTRAL SPECIES 61 ENSGT00730000111020.b.b.d ENSGT01070000254033 ENSGT00940000155052 ENSGT00550000074997 ENSGT00940000155154.b.s ENSGT00940000159376.c ENSGT00950000182848.c.b.a.b.f ENSGT00390000010923.c ENSGT00940000160402.a ENSGT00950000182978.A.a.b.b.c ENSGT00630000089884.B.b.b ENSGT00390000001562 ENSGT00940000157014.f.d ENSGT00950000183131.a.f.m.a ENSGT00950000183176.a.h.b ENSGT00950000182863.A.a.b.g.a #22 ENSGT00940000158764.g.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000160093.a.b River trout MODERN SPECIES 7 ddx27 (ENSSTUG00000029757) ZNFX1 (ENSSTUG00000030106) CDH22 (ENSSTUG00000030249) ENSSTUG00000030283 ENSSTUG00000030292 ENSSTUG00000030299 tfap2c (ENSSTUG00000026157) rtf2 (ENSSTUG00000026219) GCNT7 (ENSSTUG00000026244) eya2 (ENSSTUG00000026254) RNF213 (ENSSTUG00000026277) pxmp4 (ENSSTUG00000026318) itcha (ENSSTUG00000026451) NECAB3 (ENSSTUG00000030399) cbfa2t2 (ENSSTUG00000030417) SNTA1 (ENSSTUG00000030542) #22 tox2 (ENSSTUG00000030546) ENSSTUG00000030589 RALGAPB (ENSSTUG00000030603) KCNQ2 (ENSSTUG00000030932) CHRNA4 (ENSSTUG00000031023) ENSSTUG00000031046 arfrp1 (ENSSTUG00000031050) ENSSTUG00000031061 STMN3 (ENSSTUG00000031072) HELZ2 (ENSSTUG00000031078) stk35l (ENSSTUG00000031221) FNDC11 (ENSSTUG00000031239) ENSSTUG00000031249 ENSSTUG00000031258 ENSSTUG00000031693 Atlantic salmon MODERN SPECIES 14 ENSSSAG00000044773 snrpb (ENSSSAG00000044713) ddx27 (ENSSSAG00000043757) ENSSSAG00000043036 cdh22 (ENSSSAG00000042756) tfap2c (ENSSSAG00000042513) ENSSSAG00000042503 rtf2 (ENSSSAG00000042491) eya2 (ENSSSAG00000041586) ENSSSAG00000113884 ENSSSAG00000041408 ENSSSAG00000099299 itcha (ENSSSAG00000009092) necab3 (ENSSSAG00000008672) cbfa2t2 (ENSSSAG00000074944) SNTA1 (ENSSSAG00000090448) #22 ENSSSAG00000120643 tox2 (ENSSSAG00000074925) ENSSSAG00000074767 ENSSSAG00000073474 ENSSSAG00000073387 arfrp1 (ENSSSAG00000121578) ENSSSAG00000073370 ENSSSAG00000073361 ENSSSAG00000073332 ENSSSAG00000088866 ENSSSAG00000073320 p2ry1 (ENSSSAG00000073317) ENSSSAG00000103666 ENSSSAG00000072682 ENSSSAG00000104432 Salmoninae ANCESTRAL SPECIES 20 ENSGT00390000016206.n ENSGT00510000047836.g.a ENSGT00930000150941.xb ENSGT00940000178990 ENSGT00730000111020.b.b.c ENSGT00940000155154.b.t ENSGT00940000159376.d ENSGT00950000182848.c.b.a.b.e ENSGT00940000160402.b ENSGT00390000010923.d ENSGT00950000182978.A.a.b.b.d ENSGT01050000244866.D.b.a ENSGT00940000157014.f.c ENSGT00950000183131.a.f.m.b ENSGT00950000183176.a.h.a ENSGT00950000182863.A.a.b.g.b #22 ENSGT00940000158764.g.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000160093.a.a ENSGT00940000156407.b ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000166655.j ENSGT00940000158197.c.f ENSGT00940000155094.a.d ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a.f ENSGT00390000012914.k.b ENSGT00940000159430.c ENSGT00390000004215.a.b.a.k.a ENSGT00940000161320.e.a.a ENSGT00940000154491.d.b.a Huchen MODERN SPECIES 107 CDH22 (ENSHHUG00000023060) tfap2c (ENSHHUG00000023022) GCNT7 (ENSHHUG00000023013) rtf2 (ENSHHUG00000022990) eya2 (ENSHHUG00000022945) ENSHHUG00000022941 tgm5l (ENSHHUG00000022888) itcha (ENSHHUG00000022741) NECAB3 (ENSHHUG00000022714) cbfa2t2 (ENSHHUG00000022654) SNTA1 (ENSHHUG00000022642) #22 tox2 (ENSHHUG00000022632) Salmoninae_a ANCESTRAL SPECIES 21 ENSGT01100000263545.a.b.d.b.f ENSGT00390000016206.n ENSGT00510000047836.g.a ENSGT00930000150941.xb ENSGT00730000111020.b.b.c ENSGT00940000155154.b.t ENSGT00940000159376.d ENSGT00950000182848.c.b.a.b.e ENSGT00390000010923.d ENSGT00940000160402.b ENSGT00950000182978.A.a.b.b.d ENSGT01050000244866.D.b.a ENSGT00940000157014.f.c ENSGT00950000183131.a.f.m.b ENSGT00950000183176.a.h.a ENSGT00950000182863.A.a.b.g.b #22 ENSGT00940000158764.g.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000160093.a.a ENSGT00940000156407.b ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000166655.j ENSGT00940000158197.c.f ENSGT00940000155094.a.d ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a.f ENSGT00390000012914.k.b ENSGT00940000159430.c ENSGT00390000004215.a.b.a.k.a ENSGT00940000161320.e.a.a ENSGT00940000154491.d.b.a Salmo ANCESTRAL SPECIES 62 ENSGT00390000016206.n ENSGT00510000047836.g.a ENSGT00930000150941.xb ENSGT00730000111020.b.b.c ENSGT00940000155154.b.t ENSGT01030000234565.a.b.b.b.b.c.b.a.a.a.a.b ENSGT00940000159376.d ENSGT00950000182848.c.b.a.b.e ENSGT00390000010923.d ENSGT00940000160402.b ENSGT00950000182978.A.a.b.b.d ENSGT01050000244866.D.b.a ENSGT00940000157014.f.c ENSGT00950000183131.a.f.m.b ENSGT00950000183176.a.h.a ENSGT00950000182863.A.a.b.g.b #22 ENSGT00940000158764.g.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000160093.a.a ENSGT00940000156407.b ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000166655.j ENSGT00940000158197.c.f ENSGT00940000155094.a.d ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a.f ENSGT00390000012914.k.b ENSGT00940000159430.c ENSGT00390000004215.a.b.a.k.a ENSGT00940000161320.e.a.a ENSGT00940000154491.d.b.a River trout MODERN SPECIES 5 pcif1 (ENSSTUG00000008009) DNTTIP1 (ENSSTUG00000007962) ube2c (ENSSTUG00000007947) ENSSTUG00000007940 ZNFX1 (ENSSTUG00000007683) ENSSTUG00000007677 CDH22 (ENSSTUG00000007594) tfap2c (ENSSTUG00000007554) GCNT7 (ENSSTUG00000007539) rtf2 (ENSSTUG00000007517) eya2 (ENSSTUG00000007453) tgm5l (ENSSTUG00000007433) itcha (ENSSTUG00000004043) NECAB3 (ENSSTUG00000003768) cbfa2t2 (ENSSTUG00000002905) SNTA1 (ENSSTUG00000002850) #22 tox2 (ENSSTUG00000002768) RALGAPB (ENSSTUG00000002634) KCNQ2 (ENSSTUG00000002400) arfrp1 (ENSSTUG00000002368) STMN3 (ENSSTUG00000002361) ENSSTUG00000002123 ENSSTUG00000002050 ENSSTUG00000002048 ENSSTUG00000002036 ENSSTUG00000001696 tp53rk (ENSSTUG00000001473) slc2a10 (ENSSTUG00000001199) ENSSTUG00000050611 tcf15 (ENSSTUG00000050608) ENSSTUG00000050607 Atlantic salmon MODERN SPECIES 3 ENSSSAG00000077383 pltp (ENSSSAG00000080151) ENSSSAG00000080167 ENSSSAG00000092360 ENSSSAG00000120035 ENSSSAG00000080227 ENSSSAG00000080257 tfap2c (ENSSSAG00000111370) rtf2 (ENSSSAG00000080288) GCNT7 (ENSSSAG00000085321) eya2 (ENSSSAG00000080295) ENSSSAG00000107656 ENSSSAG00000080309 itcha (ENSSSAG00000080346) ENSSSAG00000080577 ENSSSAG00000080603 #22 cbfa2t2 (ENSSSAG00000080585) tox2 (ENSSSAG00000080613) ENSSSAG00000080632 ENSSSAG00000042204 ENSSSAG00000080768 arfrp (ENSSSAG00000080960) ENSSSAG00000082937 ENSSSAG00000004236 ENSSSAG00000004482 ENSSSAG00000004500 ENSSSAG00000004521 tp53rk (ENSSSAG00000004562) slc2a10 (ENSSSAG00000004573) ENSSSAG00000108144 ENSSSAG00000004706 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00390000016206.n ENSGT00510000047836.g.a ENSGT00730000111020.b.b.c ENSGT00940000155154.b.t ENSGT01030000234565.a.b.b.b.b.f.b.b.b.a.a.a.a.b.a.a ENSGT00940000159376.d ENSGT00950000182848.c.b.a.b.e ENSGT00390000010923.d ENSGT00940000160402.b ENSGT00950000182978.A.a.b.b.d ENSGT01050000244866.D.b.a ENSGT00940000157014.f.c ENSGT00950000183131.a.f.m.b ENSGT00950000183176.a.h.a ENSGT01030000239633 ENSGT00950000182863.A.a.b.g.b #22 ENSGT00940000158764.g.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000160093.a.a ENSGT00940000156407.b ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000166655.j ENSGT00940000155094.a.d ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a.f ENSGT00390000012914.k.b ENSGT00940000159430.c ENSGT00390000004215.a.b.a.k.a ENSGT00940000161320.e.a.a ENSGT00940000154491.d.b.a ENSGT00740000115534.a.a.gb.a Rainbow trout MODERN SPECIES 8 ENSOMYG00000044106 ENSOMYG00000044117 ENSOMYG00000054384 ENSOMYG00000044139 tfap2c (ENSOMYG00000044221) rtf2 (ENSOMYG00000044237) GCNT7 (ENSOMYG00000044241) eya2 (ENSOMYG00000044257) ENSOMYG00000044275 itcha (ENSOMYG00000034058) ENSOMYG00000052223 ENSOMYG00000039748 ENSOMYG00000039772 cbfa2t2 (ENSOMYG00000039917) ENSOMYG00000040126 SNTA1 (ENSOMYG00000040147) #22 tox2 (ENSOMYG00000040209) ENSOMYG00000040334 ENSOMYG00000040740 arfrp1 (ENSOMYG00000041740) ENSOMYG00000041748 ENSOMYG00000065926 ENSOMYG00000041760 ENSOMYG00000041773 ENSOMYG00000041776 ENSOMYG00000041791 ENSOMYG00000052184 ENSOMYG00000041949 slc2a10 (ENSOMYG00000042804) ENSOMYG00000042812 ENSOMYG00000060022 Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT01100000263545.a.b.d.b.f ENSGT00390000016206.n ENSGT00510000047836.g.a ENSGT00730000111020.b.b.c ENSGT00940000155154.b.t ENSGT00940000159376.d ENSGT00950000182848.c.b.a.b.e ENSGT00390000010923.d ENSGT00940000160402.b ENSGT00950000182978.A.a.b.b.d ENSGT01050000244866.D.b.a ENSGT00940000157014.f.c ENSGT00950000183131.a.f.m.b ENSGT00950000183176.a.h.a ENSGT01030000239633 ENSGT00950000182863.A.a.b.g.b #22 ENSGT00940000158764.g.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000160093.a.a ENSGT00940000156407.b ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000166655.j ENSGT00940000155094.a.d ENSGT00940000160207.a ENSGT01030000234623.a.a.a.a.a.f ENSGT00390000012914.k.b ENSGT00940000159430.c ENSGT00390000004215.a.b.a.k.a ENSGT00940000161320.e.a.a ENSGT00940000154491.d.b.a ENSGT00740000115534.a.a.gb.a Coho salmon MODERN SPECIES pltp (ENSOKIG00005003504) pcif1 (ENSOKIG00005003194) DNTTIP1 (ENSOKIG00005003139) ENSOKIG00005003132 ZNFX1 (ENSOKIG00005003123) CDH22 (ENSOKIG00005003075) tfap2c (ENSOKIG00005003032) GCNT7 (ENSOKIG00005003024) rtf2 (ENSOKIG00005003019) eya2 (ENSOKIG00005002984) tgm5l (ENSOKIG00005002966) itcha (ENSOKIG00005002526) NECAB3 (ENSOKIG00005002434) cbfa2t2 (ENSOKIG00005002304) ENSOKIG00005002248 SNTA1 (ENSOKIG00005002210) #22 tox2 (ENSOKIG00005002146) RALGAPB (ENSOKIG00005001945) KCNQ2 (ENSOKIG00005001577) arfrp1 (ENSOKIG00005001500) STMN3 (ENSOKIG00005001497) ENSOKIG00005001433 ENSOKIG00005001402 ENSOKIG00005001399 ENSOKIG00005001304 slc2a10 (ENSOKIG00005001260) ENSOKIG00005001232 ENSOKIG00005001213 ENSOKIG00005001203 ENSOKIG00005001194 ENSOKIG00005000943 Chinook salmon MODERN SPECIES 11 pltp (ENSOTSG00005038646) pcif1 (ENSOTSG00005038683) ENSOTSG00005040045 ZNFX1 (ENSOTSG00005040048) CDH22 (ENSOTSG00005040063) ENSOTSG00005040112 tfap2c (ENSOTSG00005040113) rtf2 (ENSOTSG00005040115) GCNT7 (ENSOTSG00005040117) eya2 (ENSOTSG00005040122) tgm5l (ENSOTSG00005040127) itcha (ENSOTSG00005040151) ENSOTSG00005044913 ENSOTSG00005044917 cbfa2t2 (ENSOTSG00005044919) SNTA1 (ENSOTSG00005044938) #22 tox2 (ENSOTSG00005044943) RALGAPB (ENSOTSG00005044947) KCNQ2 (ENSOTSG00005045047) arfrp1 (ENSOTSG00005045496) STMN3 (ENSOTSG00005045498) ENSOTSG00005045499 ENSOTSG00005045503 ENSOTSG00005045504 SERINC3 (ENSOTSG00005045508) tp53rk (ENSOTSG00005045717) slc2a10 (ENSOTSG00005045718) ENSOTSG00005045723 tcf15 (ENSOTSG00005046135) ENSOTSG00005046136 ENSOTSG00005046137 Salmoninae ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.h #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.h #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.h #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000182863.A.a.b.h #22 Coho salmon MODERN SPECIES 25 ENSOKIG00005000165 CDH22 (ENSOKIG00005000135) ENSOKIG00005000057 ENSOKIG00005047154 tfap2c (ENSOKIG00005047140) GCNT7 (ENSOKIG00005047128) rtf2 (ENSOKIG00005047123) ENSOKIG00005047117 eya2 (ENSOKIG00005047080) ENSOKIG00005047063 pxmp4 (ENSOKIG00005047049) itcha (ENSOKIG00005045129) ENSOKIG00005044979 cbfa2t2 (ENSOKIG00005044929) ENSOKIG00005044917 ENSOKIG00005044883 #22 tox2 (ENSOKIG00005044848) RALGAPB (ENSOKIG00005044618) KCNQ2 (ENSOKIG00005044400) CHRNA4 (ENSOKIG00005044316) ENSOKIG00005044303 arfrp1 (ENSOKIG00005044265) ENSOKIG00005044181 STMN3 (ENSOKIG00005044143) HELZ2 (ENSOKIG00005043991) stk35l (ENSOKIG00005043963) FNDC11 (ENSOKIG00005043948) ENSOKIG00005043940 ENSOKIG00005043832 ENSOKIG00005043783 tp53rk (ENSOKIG00005043770) Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Cod MODERN SPECIES 4 bloc1s1 (ENSGMOG00000013215) ENSGMOG00000013219 ENSGMOG00000013252 ENSGMOG00000013259 eya2 (ENSGMOG00000013279) rtf2 (ENSGMOG00000013299) ENSGMOG00000013312 tfap2c (ENSGMOG00000013321) ENSGMOG00000026965 ENSGMOG00000015951 ENSGMOG00000000630 ENSGMOG00000000715 ENSGMOG00000000738 NECAB3 (ENSGMOG00000000759) cbfa2t2 (ENSGMOG00000000777) SNTA1 (ENSGMOG00000000801) #22 tox2 (ENSGMOG00000000815) st7l (ENSGMOG00000007834) ENSGMOG00000030126 CTTNBP2NL (ENSGMOG00000007846) KCND3 (ENSGMOG00000007849) INKA2 (ENSGMOG00000022329) ENSGMOG00000007859 timm17a (ENSGMOG00000007865) ENSGMOG00000036519 shisa4 (ENSGMOG00000007879) ipo9 (ENSGMOG00000007883) ENSGMOG00000007896 ENSGMOG00000027552 prelid3b (ENSGMOG00000007909) ENSGMOG00000007912 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Pinecone sodierfish MODERN SPECIES 19 bloc1s1 (ENSMMDG00005018410) itcha (ENSMMDG00005013833) pxmp4 (ENSMMDG00005013778) tgm5l (ENSMMDG00005013776) eya2 (ENSMMDG00005013773) GCNT7 (ENSMMDG00005013771) rtf2 (ENSMMDG00005013770) tfap2c (ENSMMDG00005013769) CDH22 (ENSMMDG00005013765) ZNFX1 (ENSMMDG00005012991) tbc1d20 (ENSMMDG00005012970) rbck1 (ENSMMDG00005012968) ENSMMDG00005012964 ENSMMDG00005012962 cbfa2t2 (ENSMMDG00005011384) SNTA1 (ENSMMDG00005011334) #22 tox2 (ENSMMDG00005011331) st7l (ENSMMDG00005010788) wnt2ba (ENSMMDG00005010772) CTTNBP2NL (ENSMMDG00005010766) KCND3 (ENSMMDG00005010757) INKA2 (ENSMMDG00005010756) ENSMMDG00005010741 timm17a (ENSMMDG00005010734) LMOD1 (ENSMMDG00005010731) shisa4 (ENSMMDG00005010729) ipo9 (ENSMMDG00005010677) TUBB1 (ENSMMDG00005010661) prelid3b (ENSMMDG00005010660) aurka (ENSMMDG00005010658) slc32a1 (ENSMMDG00005010656) Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Tiger tail seahorse MODERN SPECIES 516 ENSHCOG00000001104 ARHGAP9 (ENSHCOG00000001098) mars1 (ENSHCOG00000001090) ddit3 (ENSHCOG00000001079) dctn2 (ENSHCOG00000001072) KIF5A (ENSHCOG00000001057) soat2 (ENSHCOG00000001042) igsf8 (ENSHCOG00000001034) sp7 (ENSHCOG00000001032) tarbp2 (ENSHCOG00000001027) ENSHCOG00000001023 sp1 (ENSHCOG00000001021) ENSHCOG00000001013 cbfa2t2 (ENSHCOG00000001009) ENSHCOG00000001005 SNTA1 (ENSHCOG00000001001) #22 tox2 (ENSHCOG00000000993) st7l (ENSHCOG00000000984) wnt2ba (ENSHCOG00000000973) CTTNBP2NL (ENSHCOG00000000969) KCND3 (ENSHCOG00000000042) INKA2 (ENSHCOG00000000962) ENSHCOG00000000958 CAMKV (ENSHCOG00000000949) ENSHCOG00000000945 sema3fa (ENSHCOG00000000939) gnat1 (ENSHCOG00000000934) edem1 (ENSHCOG00000000928) arl8ba (ENSHCOG00000000920) ENSHCOG00000000917 ENSHCOG00000000912 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Eupercaria ANCESTRAL SPECIES ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000174536 ENSGT00940000159891 ENSGT00390000015021 ENSGT00940000161232 ENSGT00940000155331.B ENSGT00390000016619.b ENSGT00940000155224.c.a ENSGT00940000154360.A.a ENSGT00390000010265 ENSGT00940000159006.c.a ENSGT00940000154129.gd ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00390000011581.d ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a Tetraodon MODERN SPECIES 2 alas1 (ENSTNIG00000014820) ITGA7 (ENSTNIG00000014821) PPP1R1A (ENSTNIG00000014822) ENSTNIG00000014823 nckap1l (ENSTNIG00000014824) COL2A1 (ENSTNIG00000014825) ENSTNIG00000014826 myg1 (ENSTNIG00000014827) MAP3K12 (ENSTNIG00000014828) tbc1d20 (ENSTNIG00000014829) ENSTNIG00000014830 rbck1 (ENSTNIG00000014831) ENSTNIG00000014832 NECAB3 (ENSTNIG00000014833) cbfa2t2 (ENSTNIG00000014834) SNTA1 (ENSTNIG00000007032) #22 tox2 (ENSTNIG00000007033) st7l (ENSTNIG00000007034) wnt2ba (ENSTNIG00000007035) CTTNBP2NL (ENSTNIG00000007036) ENSTNIG00000000525 KCND3 (ENSTNIG00000007037) INKA2 (ENSTNIG00000007038) ift52 (ENSTNIG00000007039) ENSTNIG00000007040 timm17a (ENSTNIG00000007041) LMOD1 (ENSTNIG00000007042) shisa4 (ENSTNIG00000007043) ipo9 (ENSTNIG00000007044) ENSTNIG00000000002 GNAS (ENSTNIG00000007045) Fugu MODERN SPECIES 10 ENSTRUG00000032881 ENSTRUG00000028742 ENSTRUG00000009292 ENSTRUG00000009342 nckap1l (ENSTRUG00000009633) ENSTRUG00000010345 ENSTRUG00000011099 myg1 (ENSTRUG00000011121) MAP3K12 (ENSTRUG00000011230) PCBP2 (ENSTRUG00000011419) tbc1d20 (ENSTRUG00000011618) ENSTRUG00000032854 rbck1 (ENSTRUG00000011750) NECAB3 (ENSTRUG00000026760) cbfa2t2 (ENSTRUG00000012051) SNTA1 (ENSTRUG00000012314) #22 tox2 (ENSTRUG00000012424) st7l (ENSTRUG00000012482) wnt2ba (ENSTRUG00000012568) CTTNBP2NL (ENSTRUG00000021985) KCND3 (ENSTRUG00000012622) INKA2 (ENSTRUG00000030122) ift52 (ENSTRUG00000012705) ENSTRUG00000029605 timm17a (ENSTRUG00000012814) ENSTRUG00000012733 LMOD1 (ENSTRUG00000012878) shisa4 (ENSTRUG00000022506) ipo9 (ENSTRUG00000012941) GNAS (ENSTRUG00000013102) tubb1 (ENSTRUG00000013246) Eupecaria_A ANCESTRAL SPECIES ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Ballan wrasse MODERN SPECIES 407 ZNFX1 (ENSLBEG00000023342) tbc1d20 (ENSLBEG00000023379) rbck1 (ENSLBEG00000023414) NECAB3 (ENSLBEG00000023491) cbfa2t2 (ENSLBEG00000023516) SNTA1 (ENSLBEG00000023541) #22 tox2 (ENSLBEG00000023573) st7l (ENSLBEG00000023598) wnt2ba (ENSLBEG00000023633) CTTNBP2NL (ENSLBEG00000023653) ENSLBEG00000023666 Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 European seabass MODERN SPECIES 10 ENSDLAG00005015804 bloc1s1 (ENSDLAG00005015781) ENSDLAG00005013709 ENSDLAG00005013666 ENSDLAG00005013642 eya2 (ENSDLAG00005013401) GCNT7 (ENSDLAG00005013362) rtf2 (ENSDLAG00005026993) TFAP2C (ENSDLAG00005013308) CDH22 (ENSDLAG00005013300) ENSDLAG00005012780 TBC1D20 (ENSDLAG00005028710) ENSDLAG00005012710 NECAB1 (ENSDLAG00005012677) cbfa2t2 (ENSDLAG00005012412) SNTA1 (ENSDLAG00005012306) #22 tox2 (ENSDLAG00005012281) st7l (ENSDLAG00005011086) ENSDLAG00005011030 CTTNBP2NL (ENSDLAG00005010984) KCND3 (ENSDLAG00005010969) INKA2 (ENSDLAG00005010963) ENSDLAG00005010956 ENSDLAG00005010947 ENSDLAG00005030490 ipo9 (ENSDLAG00005010259) ENSDLAG00005031086 TUB (ENSDLAG00005009663) prelid3b (ENSDLAG00005009646) STK6 (ENSDLAG00005009640) slc32a1 (ENSDLAG00005009631) Large yellow croaker MODERN SPECIES 478 rdh5 (ENSLCRG00005022511) bloc1s1 (ENSLCRG00005022499) itcha (ENSLCRG00005022370) pxmp4 (ENSLCRG00005022305) tgm5l (ENSLCRG00005022303) eya2 (ENSLCRG00005022288) GCNT7 (ENSLCRG00005022282) rtf2 (ENSLCRG00005022276) tfap2c (ENSLCRG00005022266) CDH22 (ENSLCRG00005022262) ZNFX1 (ENSLCRG00005022240) tbc1d20 (ENSLCRG00005022211) rbck1 (ENSLCRG00005022205) NECAB3 (ENSLCRG00005022194) cbfa2t2 (ENSLCRG00005021634) SNTA1 (ENSLCRG00005021499) #22 tox2 (ENSLCRG00005021471) st7l (ENSLCRG00005021337) wnt2ba (ENSLCRG00005021312) CTTNBP2NL (ENSLCRG00005021309) KCND3 (ENSLCRG00005021304) INKA2 (ENSLCRG00005021302) rap1ab (ENSLCRG00005021300) timm17a (ENSLCRG00005021299) LMOD1 (ENSLCRG00005021298) shisa4 (ENSLCRG00005021290) ipo9 (ENSLCRG00005021228) prelid3b (ENSLCRG00005021196) ENSLCRG00005021193 aurka (ENSLCRG00005021191) slc32a1 (ENSLCRG00005021190) Gilthead seabream MODERN SPECIES 20 itcha (ENSSAUG00010008871) pxmp4 (ENSSAUG00010017128) tgm5l (ENSSAUG00010017129) eya2 (ENSSAUG00010017131) rtf2 (ENSSAUG00010017138) GCNT7 (ENSSAUG00010017140) tfap2c (ENSSAUG00010017146) ENSSAUG00010017156 ENSSAUG00010017160 CDH22 (ENSSAUG00010017167) ZNFX1 (ENSSAUG00010017184) tbc1d20 (ENSSAUG00010017190) rbck1 (ENSSAUG00010017194) NECAB3 (ENSSAUG00010017198) cbfa2t2 (ENSSAUG00010017211) SNTA1 (ENSSAUG00010017758) #22 tox2 (ENSSAUG00010017887) st7l (ENSSAUG00010017894) wnt2ba (ENSSAUG00010019711) CTTNBP2NL (ENSSAUG00010019714) KCND3 (ENSSAUG00010019718) INKA2 (ENSSAUG00010019724) ENSSAUG00010019728 Tim17A (ENSSAUG00010019755) LMOD1 (ENSSAUG00010019757) shisa4 (ENSSAUG00010019759) ipo9 (ENSSAUG00010019778) GNAS (ENSSAUG00010020708) ENSSAUG00010021276 prelid3b (ENSSAUG00010021278) aurka (ENSSAUG00010021279) Perciformes ANCESTRAL SPECIES ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000163895 ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Perciformes_a ANCESTRAL SPECIES 5 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d ENSGT00940000163895 ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Channel bull blenny MODERN SPECIES 19 bloc1s1 (ENSCGOG00000020690) itcha (ENSCGOG00000018197) pxmp4 (ENSCGOG00000018129) tgm5l (ENSCGOG00000018128) eya2 (ENSCGOG00000018103) GCNT7 (ENSCGOG00000018098) rtf2 (ENSCGOG00000018096) tfap2c (ENSCGOG00000018093) ENSCGOG00000018091 CDH22 (ENSCGOG00000017329) ZNFX1 (ENSCGOG00000017228) tbc1d20 (ENSCGOG00000017221) rbck1 (ENSCGOG00000017217) NECAB3 (ENSCGOG00000017215) cbfa2t2 (ENSCGOG00000016835) SNTA1 (ENSCGOG00000016765) #22 tox2 (ENSCGOG00000016757) st7l (ENSCGOG00000015612) wnt2ba (ENSCGOG00000015569) CTTNBP2NL (ENSCGOG00000015562) KCND3 (ENSCGOG00000015548) INKA2 (ENSCGOG00000015546) rap1ab (ENSCGOG00000015372) timm17a (ENSCGOG00000015367) LMOD1 (ENSCGOG00000015366) shisa4 (ENSCGOG00000015365) ipo9 (ENSCGOG00000014708) ENSCGOG00000013273 ENSCGOG00000013226 prelid3b (ENSCGOG00000013223) aurka (ENSCGOG00000013220) Pike perch MODERN SPECIES 17 bloc1s1 (ENSSLUG00000004132) itcha (ENSSLUG00000001012) pxmp4 (ENSSLUG00000000717) tgm5l (ENSSLUG00000000711) eya2 (ENSSLUG00000000699) ENSSLUG00000000690 GCNT7 (ENSSLUG00000000686) rtf2 (ENSSLUG00000000679) tfap2c (ENSSLUG00000000674) CDH22 (ENSSLUG00000000666) ZNFX1 (ENSSLUG00000000580) tbc1d20 (ENSSLUG00000000553) rbck1 (ENSSLUG00000000548) NECAB3 (ENSSLUG00000000542) cbfa2t2 (ENSSLUG00000000510) SNTA1 (ENSSLUG00000000472) #22 tox2 (ENSSLUG00000000459) st7l (ENSSLUG00000000356) wnt2ba (ENSSLUG00000000283) CTTNBP2NL (ENSSLUG00000000276) KCND3 (ENSSLUG00000000267) ENSSLUG00000000262 ENSSLUG00000022900 timm17a (ENSSLUG00000022894) LMOD1 (ENSSLUG00000022891) shisa4 (ENSSLUG00000022888) ipo9 (ENSSLUG00000022874) ENSSLUG00000022856 ENSSLUG00000022844 GNAS (ENSSLUG00000022470) tubb1 (ENSSLUG00000022418) Cottioidei ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Stickleback MODERN SPECIES 17 rdh5 (ENSGACG00000005847) bloc1s1 (ENSGACG00000005870) itcha (ENSGACG00000005875) pxmp4 (ENSGACG00000005891) tgm5l (ENSGACG00000005904) eya2 (ENSGACG00000005912) rtf2 (ENSGACG00000005926) GCNT7 (ENSGACG00000005941) tfap2c (ENSGACG00000005944) CDH22 (ENSGACG00000005966) ZNFX1 (ENSGACG00000006038) tbc1d20 (ENSGACG00000006050) rbck1 (ENSGACG00000006056) NECAB3 (ENSGACG00000006069) cbfa2t2 (ENSGACG00000006075) SNTA1 (ENSGACG00000006083) #22 tox2 (ENSGACG00000006088) st7l (ENSGACG00000006093) wnt2ba (ENSGACG00000006111) CTTNBP2NL (ENSGACG00000006115) KCND3 (ENSGACG00000006124) INKA2 (ENSGACG00000006147) rap1ab (ENSGACG00000006153) timm17a (ENSGACG00000006187) LMOD1 (ENSGACG00000006223) shisa4 (ENSGACG00000006225) ipo9 (ENSGACG00000006233) GNAS (ENSGACG00000006249) tubb1 (ENSGACG00000006306) prelid3b (ENSGACG00000006335) aurka (ENSGACG00000006354) Lumpfish MODERN SPECIES 20 rdh5 (ENSCLMG00005008974) bloc1s1 (ENSCLMG00005008973) itcha (ENSCLMG00005001098) pxmp4 (ENSCLMG00005001050) tgm5l (ENSCLMG00005001046) eya2 (ENSCLMG00005001015) GCNT7 (ENSCLMG00005001014) rtf2 (ENSCLMG00005001013) tfap2c (ENSCLMG00005001012) CDH22 (ENSCLMG00005001010) ZNFX1 (ENSCLMG00005000864) tbc1d20 (ENSCLMG00005000854) rbck1 (ENSCLMG00005000804) ENSCLMG00005000802 cbfa2t2 (ENSCLMG00005000800) SNTA1 (ENSCLMG00005000798) #22 tox2 (ENSCLMG00005000794) st7l (ENSCLMG00005000309) wnt2ba (ENSCLMG00005000250) CTTNBP2NL (ENSCLMG00005000191) KCND3 (ENSCLMG00005000170) INKA2 (ENSCLMG00005000157) ENSCLMG00005000141 timm17a (ENSCLMG00005000122) LMOD1 (ENSCLMG00005000108) shisa4 (ENSCLMG00005000080) ipo9 (ENSCLMG00005013404) GNAS (ENSCLMG00005013240) ENSCLMG00005013212 prelid3b (ENSCLMG00005013194) aurka (ENSCLMG00005013193) Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Anabantaria ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Zig-zag eel MODERN SPECIES 19 ENSMAMG00000027940 ENSMAMG00000008254 ENSMAMG00000008269 ENSMAMG00000025163 ENSMAMG00000008301 eya2 (ENSMAMG00000008321) rtf2 (ENSMAMG00000008340) ENSMAMG00000024278 tfap2c (ENSMAMG00000008361) ENSMAMG00000008384 ENSMAMG00000008423 ENSMAMG00000008435 ENSMAMG00000008450 NECAB3 (ENSMAMG00000008467) cbfa2t2 (ENSMAMG00000008483) SNTA1 (ENSMAMG00000008517) #22 tox2 (ENSMAMG00000008566) st7l (ENSMAMG00000008630) ENSMAMG00000008666 CTTNBP2NL (ENSMAMG00000008683) KCND3 (ENSMAMG00000008691) INKA2 (ENSMAMG00000026222) ENSMAMG00000026108 timm17a (ENSMAMG00000024741) ENSMAMG00000008764 shisa4 (ENSMAMG00000008778) ipo9 (ENSMAMG00000008798) ENSMAMG00000009479 prelid3b (ENSMAMG00000009500) ENSMAMG00000009517 slc32a1 (ENSMAMG00000009549) Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Siamese fighting fish MODERN SPECIES 16 bloc1s1 (ENSBSLG00000025917) itcha (ENSBSLG00000025915) pxmp4 (ENSBSLG00000025907) tgm5l (ENSBSLG00000025906) eya2 (ENSBSLG00000025903) GCNT7 (ENSBSLG00000025902) rtf2 (ENSBSLG00000025901) tfap2c (ENSBSLG00000025900) ENSBSLG00000025899 CDH22 (ENSBSLG00000025897) ZNFX1 (ENSBSLG00000025896) tbc1d20 (ENSBSLG00000025895) rbck1 (ENSBSLG00000025893) NECAB3 (ENSBSLG00000025892) cbfa2t2 (ENSBSLG00000025884) SNTA1 (ENSBSLG00000025876) #22 ENSBSLG00000025875 tox2 (ENSBSLG00000025874) st7l (ENSBSLG00000025865) wnt2ba (ENSBSLG00000025863) CTTNBP2NL (ENSBSLG00000025860) KCND3 (ENSBSLG00000025857) INKA2 (ENSBSLG00000025856) ENSBSLG00000025855 timm17a (ENSBSLG00000025853) LMOD1 (ENSBSLG00000025851) shisa4 (ENSBSLG00000025850) ipo9 (ENSBSLG00000025814) GNAS (ENSBSLG00000025750) ENSBSLG00000025735 prelid3b (ENSBSLG00000025726) Climbing perch MODERN SPECIES 18 ENSATEG00000025065 bloc1s1 (ENSATEG00000029358) ENSATEG00000025063 ENSATEG00000025062 ENSATEG00000025061 ENSATEG00000025060 GCNT7 (ENSATEG00000025059) rtf2 (ENSATEG00000025058) tfap2c (ENSATEG00000025057) ENSATEG00000025056 ENSATEG00000025055 ENSATEG00000025054 ENSATEG00000026465 NECAB3 (ENSATEG00000030193) cbfa2t2 (ENSATEG00000025051) SNTA1 (ENSATEG00000025050) #22 tox2 (ENSATEG00000025049) st7l (ENSATEG00000025048) ENSATEG00000025047 CTTNBP2NL (ENSATEG00000025046) KCND3 (ENSATEG00000025045) INKA2 (ENSATEG00000025044) ENSATEG00000025043 timm17a (ENSATEG00000025041) ENSATEG00000025040 shisa4 (ENSATEG00000025039) ipo9 (ENSATEG00000025038) ENSATEG00000026000 ENSATEG00000025036 prelid3b (ENSATEG00000025035) ENSATEG00000025034 Carangaria ANCESTRAL SPECIES 3 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Carangaria_A ANCESTRAL SPECIES 92 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b Seriola ANCESTRAL SPECIES 166 ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b Greater amberjack MODERN SPECIES 311 CDH22 (ENSSDUG00000023634) ZNFX1 (ENSSDUG00000023633) tbc1d20 (ENSSDUG00000023632) rbck1 (ENSSDUG00000023631) ENSSDUG00000023630 ENSSDUG00000023629 cbfa2t2 (ENSSDUG00000023628) SNTA1 (ENSSDUG00000023627) #22 tox2 (ENSSDUG00000023626) st7l (ENSSDUG00000023625) wnt2ba (ENSSDUG00000023624) CTTNBP2NL (ENSSDUG00000023623) KCND3 (ENSSDUG00000023622) Yellowtail amberjack MODERN SPECIES 3114 CDH22 (ENSSLDG00000008082) ZNFX1 (ENSSLDG00000008179) tbc1d20 (ENSSLDG00000008277) rbck1 (ENSSLDG00000008305) NECAB3 (ENSSLDG00000008330) cbfa2t2 (ENSSLDG00000008367) SNTA1 (ENSSLDG00000008414) #22 tox2 (ENSSLDG00000008454) st7l (ENSSLDG00000008479) wnt2ba (ENSSLDG00000008539) CTTNBP2NL (ENSSLDG00000008571) KCND3 (ENSSLDG00000008587) Barramundi perch MODERN SPECIES 224 rdh5 (ENSLCAG00010014450) bloc1s1 (ENSLCAG00010014454) itcha (ENSLCAG00010014766) pxmp4 (ENSLCAG00010016286) tgm5l (ENSLCAG00010016287) eya2 (ENSLCAG00010016289) rtf2 (ENSLCAG00010016293) GCNT7 (ENSLCAG00010016296) tfap2c (ENSLCAG00010016301) CDH22 (ENSLCAG00010016315) ZNFX1 (ENSLCAG00010016335) tbc1d20 (ENSLCAG00010016380) rbck1 (ENSLCAG00010016385) NECAB3 (ENSLCAG00010016394) cbfa2t2 (ENSLCAG00010016403) SNTA1 (ENSLCAG00010016408) #22 tox2 (ENSLCAG00010016414) st7l (ENSLCAG00010016451) wnt2ba (ENSLCAG00010016554) CTTNBP2NL (ENSLCAG00010016560) KCND3 (ENSLCAG00010016581) Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Tongue sole MODERN SPECIES 2 bloc1s1 (ENSCSEG00000019018) itcha (ENSCSEG00000019027) pxmp4 (ENSCSEG00000019042) tgm5l (ENSCSEG00000019053) eya2 (ENSCSEG00000019079) rtf2 (ENSCSEG00000019087) GCNT7 (ENSCSEG00000019096) ENSCSEG00000019102 tfap2c (ENSCSEG00000019107) CDH22 (ENSCSEG00000019123) ZNFX1 (ENSCSEG00000019131) tbc1d20 (ENSCSEG00000019138) rbck1 (ENSCSEG00000019145) NECAB3 (ENSCSEG00000019158) cbfa2t2 (ENSCSEG00000019176) SNTA1 (ENSCSEG00000019187) #22 tox2 (ENSCSEG00000019198) st7l (ENSCSEG00000019212) gpd1b (ENSCSEG00000019739) cers5 (ENSCSEG00000019746) COX14 (ENSCSEG00000019754) BCDIN3D (ENSCSEG00000019757) ENSCSEG00000019763 rab22a (ENSCSEG00000019797) vapb (ENSCSEG00000019802) APCDD1L (ENSCSEG00000019818) SRC (ENSCSEG00000019825) manbal (ENSCSEG00000019841) ENSCSEG00000019842 cyp24a1 (ENSCSEG00000019846) ENSCSEG00000019854 Turbot MODERN SPECIES 18 ENSSMAG00000010928 bloc1s1 (ENSSMAG00000030060) ENSSMAG00000010958 ENSSMAG00000011024 ENSSMAG00000011029 eya2 (ENSSMAG00000011039) rtf2 (ENSSMAG00000009907) ENSSMAG00000009924 tfap2c (ENSSMAG00000009883) ENSSMAG00000011085 ENSSMAG00000011154 ENSSMAG00000011173 ENSSMAG00000011217 NECAB3 (ENSSMAG00000011230) cbfa2t2 (ENSSMAG00000011275) SNTA1 (ENSSMAG00000011339) #22 tox2 (ENSSMAG00000011352) st7l (ENSSMAG00000011496) ENSSMAG00000011544 CTTNBP2NL (ENSSMAG00000011554) KCND3 (ENSSMAG00000011563) INKA2 (ENSSMAG00000011594) ENSSMAG00000011602 timm17a (ENSSMAG00000011624) ENSSMAG00000011649 shisa4 (ENSSMAG00000011653) ipo9 (ENSSMAG00000011675) ENSSMAG00000011773 ENSSMAG00000011813 prelid3b (ENSSMAG00000011815) ENSSMAG00000011833 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Oryzias ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Oryzias_b ANCESTRAL SPECIES 3 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Javanese ricefish MODERN SPECIES 19 bloc1s1 (ENSOJAG00000015055) itcha (ENSOJAG00000015231) pxmp4 (ENSOJAG00000017570) tgm5l (ENSOJAG00000017581) eya2 (ENSOJAG00000017619) rtf2 (ENSOJAG00000017988) GCNT7 (ENSOJAG00000017996) tfap2c (ENSOJAG00000018006) CDH22 (ENSOJAG00000018037) ENSOJAG00000018159 ZNFX1 (ENSOJAG00000018200) tbc1d20 (ENSOJAG00000018318) rbck1 (ENSOJAG00000018359) NECAB3 (ENSOJAG00000018385) cbfa2t2 (ENSOJAG00000018411) SNTA1 (ENSOJAG00000018630) #22 tox2 (ENSOJAG00000018644) ENSOJAG00000018686 st7l (ENSOJAG00000018696) wnt2ba (ENSOJAG00000018940) CTTNBP2NL (ENSOJAG00000018947) KCND3 (ENSOJAG00000019113) INKA2 (ENSOJAG00000019143) ENSOJAG00000019147 timm17a (ENSOJAG00000019182) ENSOJAG00000019226 shisa4 (ENSOJAG00000019244) ipo9 (ENSOJAG00000019267) GNAS (ENSOJAG00000019491) ENSOJAG00000019736 prelid3b (ENSOJAG00000019748) Indian medaka MODERN SPECIES 8 rdh5 (ENSOMEG00000016266) bloc1s1 (ENSOMEG00000016278) itcha (ENSOMEG00000016326) pxmp4 (ENSOMEG00000016340) tgm5l (ENSOMEG00000016409) eya2 (ENSOMEG00000016485) GCNT7 (ENSOMEG00000016509) rtf2 (ENSOMEG00000000416) tfap2c (ENSOMEG00000016630) CDH22 (ENSOMEG00000016667) ZNFX1 (ENSOMEG00000000420) tbc1d20 (ENSOMEG00000016792) rbck1 (ENSOMEG00000016829) NECAB3 (ENSOMEG00000016885) cbfa2t2 (ENSOMEG00000016995) SNTA1 (ENSOMEG00000017026) #22 tox2 (ENSOMEG00000017150) st7l (ENSOMEG00000017227) wnt2ba (ENSOMEG00000017272) CTTNBP2NL (ENSOMEG00000017321) KCND3 (ENSOMEG00000000673) INKA2 (ENSOMEG00000017386) rap1ab (ENSOMEG00000017428) timm17a (ENSOMEG00000017464) LMOD1 (ENSOMEG00000017498) shisa4 (ENSOMEG00000017517) ipo9 (ENSOMEG00000017601) GNAS (ENSOMEG00000017665) ENSOMEG00000017730 prelid3b (ENSOMEG00000017775) aurka (ENSOMEG00000017803) Oryzias_a ANCESTRAL SPECIES 5 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Japanese Medaka HdrR MODERN SPECIES 19 pxmp4 (ENSORLG00000027794) tgm5l (ENSORLG00000006224) eya2 (ENSORLG00000006206) GCNT7 (ENSORLG00000001164) rtf2 (ENSORLG00000006176) tfap2c (ENSORLG00000006158) ENSORLG00000023068 ENSORLG00000025438 ENSORLG00000029368 CDH22 (ENSORLG00000006125) ZNFX1 (ENSORLG00000006096) tbc1d20 (ENSORLG00000006067) rbck1 (ENSORLG00000006036) NECAB3 (ENSORLG00000025846) cbfa2t2 (ENSORLG00000006021) SNTA1 (ENSORLG00000005966) #22 tox2 (ENSORLG00000005944) st7l (ENSORLG00000005920) wnt2ba (ENSORLG00000005880) CTTNBP2NL (ENSORLG00000005859) KCND3 (ENSORLG00000005848) INKA2 (ENSORLG00000028015) rap1ab (ENSORLG00000005814) timm17a (ENSORLG00000022383) LMOD1 (ENSORLG00000005777) shisa4 (ENSORLG00000005773) ipo9 (ENSORLG00000005758) ENSORLG00000005722 ENSORLG00000027123 prelid3b (ENSORLG00000005656) aurka (ENSORLG00000005631) Chinese medaka MODERN SPECIES 970 tfap2c (ENSOSIG00000012739) CDH22 (ENSOSIG00000012732) ZNFX1 (ENSOSIG00000012718) tbc1d20 (ENSOSIG00000012710) rbck1 (ENSOSIG00000012708) NECAB3 (ENSOSIG00000012705) cbfa2t2 (ENSOSIG00000012658) SNTA1 (ENSOSIG00000012628) #22 tox2 (ENSOSIG00000012620) st7l (ENSOSIG00000009912) wnt2ba (ENSOSIG00000009289) CTTNBP2NL (ENSOSIG00000009283) ENSOSIG00000009280 KCND3 (ENSOSIG00000009279) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d.x.b ENSGT00940000163895 ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT01060000248530.C.d.x.b ENSGT00940000163895 ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Mangrove rivulus MODERN SPECIES 11 bloc1s1 (ENSKMAG00000014318) itcha (ENSKMAG00000014234) pxmp4 (ENSKMAG00000014204) tgm5l (ENSKMAG00000014174) eya2 (ENSKMAG00000014120) GCNT7 (ENSKMAG00000014094) rtf2 (ENSKMAG00000014071) tfap2c (ENSKMAG00000014011) ENSKMAG00000013976 CDH22 (ENSKMAG00000013931) ZNFX1 (ENSKMAG00000013898) tbc1d20 (ENSKMAG00000013864) rbck1 (ENSKMAG00000013826) NECAB3 (ENSKMAG00000013778) cbfa2t2 (ENSKMAG00000013728) SNTA1 (ENSKMAG00000013690) #22 tox2 (ENSKMAG00000013666) st7l (ENSKMAG00000013608) wnt2ba (ENSKMAG00000013565) CTTNBP2NL (ENSKMAG00000013548) KCND3 (ENSKMAG00000013514) INKA2 (ENSKMAG00000013505) rap1ab (ENSKMAG00000013480) timm17a (ENSKMAG00000013455) LMOD1 (ENSKMAG00000013439) shisa4 (ENSKMAG00000013426) ipo9 (ENSKMAG00000013352) GNAS (ENSKMAG00000013306) ENSKMAG00000013126 prelid3b (ENSKMAG00000013055) aurka (ENSKMAG00000013017) Turquoise killifish MODERN SPECIES 1619 eya2 (ENSNFUG00015005070) ENSNFUG00015004996 ENSNFUG00015004990 GCNT7 (ENSNFUG00015004943) RTFDC1 (ENSNFUG00015004915) tfap2c (ENSNFUG00015004896) ENSNFUG00015004888 CABZ01034923.1 (ENSNFUG00015004738) ZNFX1 (ENSNFUG00015023246) ENSNFUG00015023238 ENSNFUG00015023237 TBC1D20 (ENSNFUG00015023226) RBCK1 (ENSNFUG00015023220) NECAB3 (ENSNFUG00015023213) CBFA2T2 (ENSNFUG00015023157) SNTA1 (ENSNFUG00015023145) #22 ENSNFUG00015023138 TOX2 (ENSNFUG00015023136) st7l (ENSNFUG00015022943) WNT2BA (ENSNFUG00015022923) CTTNBP2NL (ENSNFUG00015022919) ENSNFUG00015022913 KCND3 (ENSNFUG00015022902) FAM212B (ENSNFUG00015022898) rap1ab (ENSNFUG00015022892) timm17a (ENSNFUG00015022888) CR628365.1 (ENSNFUG00015022881) shisa4 (ENSNFUG00015022877) ipo9 (ENSNFUG00015022807) ENSNFUG00015022784 Nfu_g_1_020961 (ENSNFUG00015022592) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Poecilia ANCESTRAL SPECIES 23 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 NAME_6 ANCESTRAL SPECIES 7 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Sailfin molly MODERN SPECIES 263 ZNFX1 (ENSPLAG00000003505) tbc1d20 (ENSPLAG00000003492) rbck1 (ENSPLAG00000003483) ENSPLAG00000003475 cbfa2t2 (ENSPLAG00000003455) SNTA1 (ENSPLAG00000003430) #22 tox2 (ENSPLAG00000003416) Amazon molly MODERN SPECIES 254 ZNFX1 (ENSPFOG00000002172) tbc1d20 (ENSPFOG00000002260) rbck1 (ENSPFOG00000002398) NECAB3 (ENSPFOG00000002548) cbfa2t2 (ENSPFOG00000003025) SNTA1 (ENSPFOG00000003151) #22 tox2 (ENSPFOG00000003305) st7l (ENSPFOG00000003534) wnt2ba (ENSPFOG00000003624) CTTNBP2NL (ENSPFOG00000003693) KCND3 (ENSPFOG00000003837) INKA2 (ENSPFOG00000003848) rap1ab (ENSPFOG00000003908) timm17a (ENSPFOG00000004005) LMOD1 (ENSPFOG00000004029) shisa4 (ENSPFOG00000022821) ipo9 (ENSPFOG00000004346) GNAS (ENSPFOG00000004527) tubb1 (ENSPFOG00000004579) prelid3b (ENSPFOG00000004673) aurka (ENSPFOG00000004761) Guppy MODERN SPECIES 457 zgc:153675 (ENSPREG00000009742) hgh1 (ENSPREG00000009723) ENSPREG00000009717 NISCH (ENSPREG00000009687) ENSPREG00000009666 ENSPREG00000009654 ccdc71 (ENSPREG00000009645) ENSPREG00000009642 pdhb (ENSPREG00000009627) pxk (ENSPREG00000009588) ZNFX1 (ENSPREG00000009540) tbc1d20 (ENSPREG00000009507) rbck1 (ENSPREG00000009475) NECAB3 (ENSPREG00000009455) cbfa2t2 (ENSPREG00000009386) SNTA1 (ENSPREG00000009350) #22 tox2 (ENSPREG00000009327) st7l (ENSPREG00000009286) wnt2ba (ENSPREG00000009263) CTTNBP2NL (ENSPREG00000009234) KCND3 (ENSPREG00000009190) INKA2 (ENSPREG00000009168) rap1ab (ENSPREG00000009158) ENSPREG00000009105 LMOD1 (ENSPREG00000009093) shisa4 (ENSPREG00000009085) ipo9 (ENSPREG00000008970) GNAS (ENSPREG00000008899) ENSPREG00000008885 ENSPREG00000008878 prelid3b (ENSPREG00000008857) Platyfish MODERN SPECIES 12 gls2b (ENSXMAG00000019361) itcha (ENSXMAG00000019367) pxmp4 (ENSXMAG00000019371) tgm5l (ENSXMAG00000019372) eya2 (ENSXMAG00000019373) ENSXMAG00000026110 rtf2 (ENSXMAG00000029796) GCNT7 (ENSXMAG00000026994) tfap2c (ENSXMAG00000005803) CDH22 (ENSXMAG00000005816) ZNFX1 (ENSXMAG00000005859) tbc1d20 (ENSXMAG00000005880) rbck1 (ENSXMAG00000005890) NECAB3 (ENSXMAG00000005908) cbfa2t2 (ENSXMAG00000013414) SNTA1 (ENSXMAG00000023046) #22 tox2 (ENSXMAG00000005925) st7l (ENSXMAG00000005934) wnt2ba (ENSXMAG00000005971) CTTNBP2NL (ENSXMAG00000023248) KCND3 (ENSXMAG00000019946) INKA2 (ENSXMAG00000029540) rap1ab (ENSXMAG00000005986) timm17a (ENSXMAG00000025518) LMOD1 (ENSXMAG00000006007) shisa4 (ENSXMAG00000006012) ipo9 (ENSXMAG00000006013) GNAS (ENSXMAG00000021862) ENSXMAG00000026750 prelid3b (ENSXMAG00000006052) aurka (ENSXMAG00000006069) NAME_4 ANCESTRAL SPECIES 14 ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Mummichog MODERN SPECIES 2369 ZNFX1 (ENSFHEG00000016960) tbc1d20 (ENSFHEG00000016946) rbck1 (ENSFHEG00000016918) ENSFHEG00000016901 NECAB3 (ENSFHEG00000016893) cbfa2t2 (ENSFHEG00000016871) SNTA1 (ENSFHEG00000016832) #22 tox2 (ENSFHEG00000016824) st7l (ENSFHEG00000016735) wnt2ba (ENSFHEG00000016647) CTTNBP2NL (ENSFHEG00000016629) KCND3 (ENSFHEG00000000417) INKA2 (ENSFHEG00000016594) ENSFHEG00000000416 timm17a (ENSFHEG00000016582) LMOD1 (ENSFHEG00000016560) shisa4 (ENSFHEG00000016553) ipo9 (ENSFHEG00000016546) GNAS (ENSFHEG00000016449) ENSFHEG00000016409 prelid3b (ENSFHEG00000000792) aurka (ENSFHEG00000016394) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 417 GCNT7 (ENSCVAG00000002586) rtf2 (ENSCVAG00000000077) tfap2c (ENSCVAG00000002598) CDH22 (ENSCVAG00000002614) ZNFX1 (ENSCVAG00000002631) tbc1d20 (ENSCVAG00000002642) rbck1 (ENSCVAG00000002649) NECAB3 (ENSCVAG00000002655) cbfa2t2 (ENSCVAG00000002664) SNTA1 (ENSCVAG00000002671) #22 tox2 (ENSCVAG00000002674) Sheepshead minnow MODERN SPECIES 211 irx2a (ENSCVAG00000008630) irx1a (ENSCVAG00000008606) ADAMTS16 (ENSCVAG00000008587) ENSCVAG00000008487 TENT4A (ENSCVAG00000008463) ADCY2 (ENSCVAG00000008423) ENSCVAG00000008140 CARMIL1 (ENSCVAG00000008107) scgn (ENSCVAG00000008001) CCN3 (ENSCVAG00000007933) ENSCVAG00000007929 ENSCVAG00000007919 ENSCVAG00000007906 ENSCVAG00000007898 #22 ENSCVAG00000007827 ENSCVAG00000007806 ENSCVAG00000007799 ENSCVAG00000007793 ENSCVAG00000007737 ENSCVAG00000007733 ENSCVAG00000007725 ENSCVAG00000007715 ENSCVAG00000007707 ENSCVAG00000007691 MFSD2A (ENSCVAG00000007681) slc38a6 (ENSCVAG00000007643) trmt5 (ENSCVAG00000007630) mnat1 (ENSCVAG00000007604) six4a (ENSCVAG00000007591) Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Cichlidae ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Midas cichlid MODERN SPECIES 423 bloc1s1 (ENSACIG00000014831) itcha (ENSACIG00000014885) pxmp4 (ENSACIG00000015031) tgm5l (ENSACIG00000015060) eya2 (ENSACIG00000015079) rtf2 (ENSACIG00000015119) GCNT7 (ENSACIG00000015151) tfap2c (ENSACIG00000015162) CDH22 (ENSACIG00000015183) ENSACIG00000015207 ZNFX1 (ENSACIG00000015220) tbc1d20 (ENSACIG00000015263) rbck1 (ENSACIG00000015287) NECAB3 (ENSACIG00000015378) cbfa2t2 (ENSACIG00000015486) SNTA1 (ENSACIG00000015523) #22 tox2 (ENSACIG00000015582) st7l (ENSACIG00000015605) wnt2ba (ENSACIG00000015642) CTTNBP2NL (ENSACIG00000015665) KCND3 (ENSACIG00000015735) INKA2 (ENSACIG00000015754) ENSACIG00000015767 timm17a (ENSACIG00000015780) LMOD1 (ENSACIG00000015796) shisa4 (ENSACIG00000015840) ipo9 (ENSACIG00000015855) GNAS (ENSACIG00000015888) ENSACIG00000015910 ENSACIG00000015917 prelid3b (ENSACIG00000015927) Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Nile tilapia MODERN SPECIES 17 rdh5 (ENSONIG00000006842) bloc1s1 (ENSONIG00000006840) itcha (ENSONIG00000006836) pxmp4 (ENSONIG00000028466) tgm5l (ENSONIG00000006833) eya2 (ENSONIG00000006828) GCNT7 (ENSONIG00000006826) rtf2 (ENSONIG00000006820) tfap2c (ENSONIG00000006816) CDH22 (ENSONIG00000006811) ZNFX1 (ENSONIG00000006808) tbc1d20 (ENSONIG00000006805) rbck1 (ENSONIG00000006803) NECAB3 (ENSONIG00000006799) cbfa2t2 (ENSONIG00000006794) SNTA1 (ENSONIG00000006790) #22 tox2 (ENSONIG00000039601) st7l (ENSONIG00000011515) wnt2ba (ENSONIG00000012283) CTTNBP2NL (ENSONIG00000011512) KCND3 (ENSONIG00000011507) INKA2 (ENSONIG00000040005) ENSONIG00000011501 timm17a (ENSONIG00000034127) LMOD1 (ENSONIG00000034043) shisa4 (ENSONIG00000011497) ipo9 (ENSONIG00000011495) GNAS (ENSONIG00000011493) ENSONIG00000011492 prelid3b (ENSONIG00000007211) aurka (ENSONIG00000011487) Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Lyretail cichlid MODERN SPECIES 294 CELA1 (ENSNBRG00000006912) gls2b (ENSNBRG00000006743) rdh5 (ENSNBRG00000006686) bloc1s1 (ENSNBRG00000006675) itcha (ENSNBRG00000006618) pxmp4 (ENSNBRG00000006589) eya2 (ENSNBRG00000006489) GCNT7 (ENSNBRG00000006446) rtf2 (ENSNBRG00000006431) tfap2c (ENSNBRG00000006405) CDH22 (ENSNBRG00000006308) ZNFX1 (ENSNBRG00000006236) rbck1 (ENSNBRG00000006179) ENSNBRG00000006132 cbfa2t2 (ENSNBRG00000006093) SNTA1 (ENSNBRG00000006037) #22 tox2 (ENSNBRG00000006005) st7l (ENSNBRG00000005946) wnt2ba (ENSNBRG00000005873) CTTNBP2NL (ENSNBRG00000005830) KCND3 (ENSNBRG00000005803) ENSNBRG00000005772 timm17a (ENSNBRG00000005748) LMOD1 (ENSNBRG00000005705) shisa4 (ENSNBRG00000005691) ipo9 (ENSNBRG00000005251) GNAS (ENSNBRG00000005102) ENSNBRG00000005022 prelid3b (ENSNBRG00000005002) aurka (ENSNBRG00000004811) slc32a1 (ENSNBRG00000004780) Haplochromini ANCESTRAL SPECIES 1 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a.g.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 136 SNTA1 (ENSHBUG00000018665) #22 Burton s mouthbrooder MODERN SPECIES 379 CDH22 (ENSHBUG00000008135) ZNFX1 (ENSHBUG00000008159) tbc1d20 (ENSHBUG00000008192) rbck1 (ENSHBUG00000008208) ENSHBUG00000008220 ENSHBUG00000008240 cbfa2t2 (ENSHBUG00000008334) SNTA1 (ENSHBUG00000008360) #22 tox2 (ENSHBUG00000008408) st7l (ENSHBUG00000008509) wnt2ba (ENSHBUG00000008538) CTTNBP2NL (ENSHBUG00000008548) KCND3 (ENSHBUG00000008689) INKA2 (ENSHBUG00000008704) ENSHBUG00000008741 timm17a (ENSHBUG00000008770) LMOD1 (ENSHBUG00000000221) shisa4 (ENSHBUG00000008786) ipo9 (ENSHBUG00000008849) ENSHBUG00000008870 prelid3b (ENSHBUG00000008888) GNAS (ENSHBUG00000008915) aurka (ENSHBUG00000008994) Haplochromini_A ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a.g.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Haplochromini_B ANCESTRAL SPECIES ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a.g.b ENSGT00950000182978.A.a.b.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Eastern happy MODERN SPECIES 17 gls2b (ENSACLG00000020848) rdh5 (ENSACLG00000020839) bloc1s1 (ENSACLG00000020823) itcha (ENSACLG00000020726) tgm5l (ENSACLG00000020666) eya2 (ENSACLG00000020618) GCNT7 (ENSACLG00000020592) rtf2 (ENSACLG00000020561) tfap2c (ENSACLG00000020525) CDH22 (ENSACLG00000020470) ZNFX1 (ENSACLG00000020441) tbc1d20 (ENSACLG00000020409) rbck1 (ENSACLG00000020380) NECAB3 (ENSACLG00000020364) cbfa2t2 (ENSACLG00000020283) SNTA1 (ENSACLG00000020269) #22 tox2 (ENSACLG00000020146) st7l (ENSACLG00000020077) wnt2ba (ENSACLG00000020056) CTTNBP2NL (ENSACLG00000020029) KCND3 (ENSACLG00000019983) INKA2 (ENSACLG00000019968) ENSACLG00000019927 timm17a (ENSACLG00000019907) LMOD1 (ENSACLG00000019895) shisa4 (ENSACLG00000019869) ipo9 (ENSACLG00000019807) GNAS (ENSACLG00000019781) ENSACLG00000019638 prelid3b (ENSACLG00000019614) aurka (ENSACLG00000019599) Zebra mbuna MODERN SPECIES 1108 rtf2 (ENSMZEG00005005069) GCNT7 (ENSMZEG00005005090) tfap2c (ENSMZEG00005005108) ENSMZEG00005005156 ENSMZEG00005005168 ENSMZEG00005005181 ENSMZEG00005005195 ENSMZEG00005005207 ENSMZEG00005005217 CDH22 (ENSMZEG00005005232) ZNFX1 (ENSMZEG00005005268) tbc1d20 (ENSMZEG00005005292) rbck1 (ENSMZEG00005005317) NECAB3 (ENSMZEG00005005332) cbfa2t2 (ENSMZEG00005005384) SNTA1 (ENSMZEG00005005431) #22 tox2 (ENSMZEG00005005462) st7l (ENSMZEG00005005492) wnt2ba (ENSMZEG00005005533) CTTNBP2NL (ENSMZEG00005005546) KCND3 (ENSMZEG00005005553) INKA2 (ENSMZEG00005005566) ENSMZEG00005005574 timm17a (ENSMZEG00005005591) LMOD1 (ENSMZEG00005005597) shisa4 (ENSMZEG00005005601) ipo9 (ENSMZEG00005005610) GNAS (ENSMZEG00005005634) ENSMZEG00005005670 prelid3b (ENSMZEG00005006164) aurka (ENSMZEG00005006183) P. nyererei MODERN SPECIES 391 eya2 (ENSPNYG00000012291) rtf2 (ENSPNYG00000012318) GCNT7 (ENSPNYG00000012346) tfap2c (ENSPNYG00000012368) CDH22 (ENSPNYG00000012427) ZNFX1 (ENSPNYG00000012569) tbc1d20 (ENSPNYG00000012613) rbck1 (ENSPNYG00000012666) ENSPNYG00000012744 cbfa2t2 (ENSPNYG00000012766) SNTA1 (ENSPNYG00000012803) #22 tox2 (ENSPNYG00000012817) st7l (ENSPNYG00000012845) wnt2ba (ENSPNYG00000012903) CTTNBP2NL (ENSPNYG00000012953) KCND3 (ENSPNYG00000013042) INKA2 (ENSPNYG00000013067) ENSPNYG00000013094 timm17a (ENSPNYG00000013132) LMOD1 (ENSPNYG00000013146) shisa4 (ENSPNYG00000013155) ipo9 (ENSPNYG00000013180) GNAS (ENSPNYG00000013223) slc32a1 (ENSPNYG00000013253) ENSPNYG00000013267 PPP1R16B (ENSPNYG00000013296) Pomacentridae ANCESTRAL SPECIES 3 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Bicolor damselfish MODERN SPECIES 407 cbfa2t2 (ENSSPAG00000014789) SNTA1 (ENSSPAG00000014819) #22 tox2 (ENSSPAG00000014838) st7l (ENSSPAG00000014900) wnt2ba (ENSSPAG00000015019) CTTNBP2NL (ENSSPAG00000015038) KCND3 (ENSSPAG00000015054) INKA2 (ENSSPAG00000015073) ENSSPAG00000015076 timm17a (ENSSPAG00000015096) LMOD1 (ENSSPAG00000015118) shisa4 (ENSSPAG00000015128) ipo9 (ENSSPAG00000015136) GNAS (ENSSPAG00000015190) ENSSPAG00000015214 prelid3b (ENSSPAG00000015232) ENSSPAG00000015251 Pomacentridae_A ANCESTRAL SPECIES 38 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000157014.f ENSGT00390000001562 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 2 ENSAPOG00000021675 CDH22 (ENSAPOG00000021657) ZNFX1 (ENSAPOG00000021578) tbc1d20 (ENSAPOG00000021502) rbck1 (ENSAPOG00000021491) NECAB3 (ENSAPOG00000021458) cbfa2t2 (ENSAPOG00000021418) SNTA1 (ENSAPOG00000021321) #22 tox2 (ENSAPOG00000000847) st7l (ENSAPOG00000021262) wnt2ba (ENSAPOG00000021199) CTTNBP2NL (ENSAPOG00000021157) KCND3 (ENSAPOG00000021043) INKA2 (ENSAPOG00000020995) ENSAPOG00000020980 ENSAPOG00000020963 timm17a (ENSAPOG00000020923) LMOD1 (ENSAPOG00000020896) shisa4 (ENSAPOG00000000594) ipo9 (ENSAPOG00000020880) GNAS (ENSAPOG00000020789) ENSAPOG00000020733 prelid3b (ENSAPOG00000020710) Spiny chromis MODERN SPECIES 2646 ENSAPOG00000023819 CCN3 (ENSAPOG00000023797) ENSAPOG00000023786 ENSAPOG00000023776 #22 Amphiprion ANCESTRAL SPECIES 57 ENSGT00940000155154.b ENSGT00390000014944.a ENSGT00940000166000 ENSGT00950000183131.a.f ENSGT00950000183176.a ENSGT00950000182863.A.a.b #22 ENSGT00940000158764.g ENSGT00390000000873.a.a ENSGT00940000166225 ENSGT00950000182852.B.a ENSGT00940000155343.a.b ENSGT00530000063849.B ENSGT00940000165619.b ENSGT00390000017780.f ENSGT00940000159825.a.b ENSGT00730000111186 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 Clown anemonefish MODERN SPECIES 1305 SNTA1 (ENSAOCG00000010544) #22 tox2 (ENSAOCG00000010531) st7l (ENSAOCG00000010504) wnt2ba (ENSAOCG00000002724) CTTNBP2NL (ENSAOCG00000010435) KCND3 (ENSAOCG00000010379) ENSAOCG00000002632 Orange clownfish MODERN SPECIES 20 ENSAPEG00000020657 ENSAPEG00000020683 ENSAPEG00000020733 ENSAPEG00000020780 ENSAPEG00000020791 ENSAPEG00000020800 ENSAPEG00000020818 ENSAPEG00000020831 ENSAPEG00000020848 ENSAPEG00000020869 ZNFX1 (ENSAPEG00000020946) rbck1 (ENSAPEG00000020959) tbc1d20 (ENSAPEG00000020998) NECAB3 (ENSAPEG00000021014) cbfa2t2 (ENSAPEG00000021039) SNTA1 (ENSAPEG00000021080) #22 tox2 (ENSAPEG00000021099) RNF123 (ENSAPEG00000021224) AMIGO3 (ENSAPEG00000021314) ENSAPEG00000021324 ENSAPEG00000021333 aldh4a1 (ENSAPEG00000021348) ENSAPEG00000021362 ASCL5 (ENSAPEG00000021385) ENSAPEG00000021402 ENSAPEG00000021412 PIK3C2B (ENSAPEG00000021430) ENSAPEG00000021523 ctsa (ENSAPEG00000021535) snrpb (ENSAPEG00000021585) ENSAPEG00000021623 Elephant shark MODERN SPECIES 2296 ENSCMIG00000005182 #22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000182863.A.a.b #22 Lamprey MODERN SPECIES 5393 ENSPMAG00000002966 #22