Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00940000159801.B #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000159801.B #22 Euteleostomi ANCESTRAL SPECIES 216 ENSGT00940000159543 #24 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT01050000244887.A.a.a.b ##25 ENSGT00390000005100 ENSGT00510000047802 ENSGT01030000234518.C.a.a ENSGT00530000064158 ENSGT00940000160969 Actinopterygii ANCESTRAL SPECIES 172 ENSGT00940000161012 ENSGT00940000159313 ENSGT00740000117177 ENSGT00940000160389 ENSGT00510000047770.c.a ENSGT00940000166140 #28 ENSGT00940000157140.b.b ENSGT00390000005147 ENSGT00470000042444 #27 ENSGT00940000161143 #26 ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT00940000157700 ENSGT00950000183144.B ENSGT00390000010768 ENSGT00940000155828 ENSGT00940000161195 ENSGT00940000160152 ENSGT00940000161361 ENSGT00390000003817 Neopterygii ANCESTRAL SPECIES 577 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 Osteoglossocephalai ANCESTRAL SPECIES 128 ENSGT00940000167287 ENSGT00940000160257 ENSGT00940000164506.b.b ENSGT00950000182917.a.b.b ENSGT00390000013719 ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00940000177692 ENSGT00390000012078.a.b ENSGT00940000163721 ENSGT00390000012267 ENSGT00390000003817 ENSGT00940000161361 ENSGT00940000160152 ENSGT00940000161195.b ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00390000005584 ENSGT01050000244887.A.a.a.a #25 ENSGT00940000157140.b.b.a Clupeocephala ANCESTRAL SPECIES 396 ENSGT00940000154277.b.b.a ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 Otomorpha ANCESTRAL SPECIES 4 ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00940000162556.E.a #13 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881 ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 Otophysi ANCESTRAL SPECIES 8 ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00940000162556.E.a #13 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b #35 Characiphysae ANCESTRAL SPECIES 18 ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00940000162556.E.a #13 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b #35 Characiphysae_b ANCESTRAL SPECIES 46 ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00940000162556.E.a #13 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b #35 Characoidei ANCESTRAL SPECIES 23 ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00940000162556.E.a #13 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b #35 ENSGT00940000157534.a.a #36 ENSGT00530000063801.a.a #37 Red-bellied piranha MODERN SPECIES 25 ppp1r12c (ENSPNAG00000029893) #7 si:dkey-43k4.3 (ENSPNAG00000029900) #8 ENSPNAG00000029907 #9 gga1 (ENSPNAG00000029929) #10 ddx17 (ENSPNAG00000029948) #11 ENSPNAG00000029960 #12 ENSPNAG00000029964 #13 ENSPNAG00000006584 #14 MPV17L (ENSPNAG00000029981) #15 bmerb1 (ENSPNAG00000029988) #16 MARF1 (ENSPNAG00000030013) #17 ENSPNAG00000030023 #18 SMARCA4 (ENSPNAG00000006636) #19 ENSPNAG00000030044 #20 ap1m2 (ENSPNAG00000030049) #21 CDKN2D (ENSPNAG00000030052) #22 ENSPNAG00000030054 #23 keap1b (ENSPNAG00000000163) #24 s1pr5b (ENSPNAG00000000164) #25 fdx2 (ENSPNAG00000007403) #26 zglp1 (ENSPNAG00000007404) #27 ENSPNAG00000007405 #28 ENSPNAG00000000165 #29 ENSPNAG00000007406 #30 HMOX1 (ENSPNAG00000007407) #31 ENSPNAG00000007409 #32 ENSPNAG00000007410 #33 ENSPNAG00000000166 #34 pde6ha (ENSPNAG00000000167) #35 rbfox2 (ENSPNAG00000000168) #36 atf4a (ENSPNAG00000000169) #37 Mexicana tetra MODERN SPECIES 4 SYNGR1 (ENSAMXG00000017443) TAB1 (ENSAMXG00000017426) MGAT3 (ENSAMXG00000017396) ENSAMXG00000036369 ENSAMXG00000017360 ENSAMXG00000033037 ENSAMXG00000040955 ENSAMXG00000036694 MPV17L (ENSAMXG00000011191) #15 bmerb1 (ENSAMXG00000011201) #16 MARF1 (ENSAMXG00000011210) #17 ENSAMXG00000033110 #18 SMARCA4 (ENSAMXG00000011238) #19 ENSAMXG00000011312 #20 ap1m2 (ENSAMXG00000031560) #21 ENSAMXG00000033328 #22 ENSAMXG00000011356 #23 keap1b (ENSAMXG00000011366) #24 s1pr5b (ENSAMXG00000025439) #25 fdx2 (ENSAMXG00000038026) #26 ENSAMXG00000034709 ENSAMXG00000038618 #28 ENSAMXG00000040688 #29 ENSAMXG00000011410 #30 ENSAMXG00000011421 #31 ENSAMXG00000043172 ENSAMXG00000031471 #32 ENSAMXG00000040535 #33 ENSAMXG00000011444 #34 pde6ha (ENSAMXG00000011446) #35 rbfox2 (ENSAMXG00000011451) #36 Electric eel MODERN SPECIES 10 dtd1 (ENSEEEG00000006133) sec23b (ENSEEEG00000005964) ccdc85al (ENSEEEG00000005955) bcl11ab (ENSEEEG00000005952) ENSEEEG00000005951 ENSEEEG00000005948 ENSEEEG00000005942 mtif2 (ENSEEEG00000005929) ENSEEEG00000005925 #13 bmerb1 (ENSEEEG00000005923) #16 MARF1 (ENSEEEG00000005915) #17 ENSEEEG00000005913 #18 SMARCA4 (ENSEEEG00000005806) #19 ENSEEEG00000005428 #20 ap1m2 (ENSEEEG00000004883) #21 CDKN2D (ENSEEEG00000004881) #22 ENSEEEG00000004879 #23 keap1b (ENSEEEG00000004878) #24 s1pr5b (ENSEEEG00000004877) #25 fdx2 (ENSEEEG00000004875) #26 zglp1 (ENSEEEG00000004874) #27 ENSEEEG00000004872 ENSEEEG00000004871 #28 ENSEEEG00000004870 #29 ENSEEEG00000004868 #30 ENSEEEG00000004867 HMOX1 (ENSEEEG00000004866) #31 ENSEEEG00000004865 ENSEEEG00000004864 #32 ENSEEEG00000004863 ENSEEEG00000004861 #34 Channel catfish MODERN SPECIES 3 ENSIPUG00000015593 ENSIPUG00000015598 c12h22orf23 (ENSIPUG00000015607) #8 micall1 (ENSIPUG00000015621) #9 gga1 (ENSIPUG00000015656) #10 ddx17 (ENSIPUG00000015768) #11 ntan1 (ENSIPUG00000015993) #12 zgc:158417 (ENSIPUG00000016110) #13 mp17l (ENSIPUG00000016127) #15 bmerb1 (ENSIPUG00000016202) #16 kiaa0430 (ENSIPUG00000016273) #17 ENSIPUG00000016328 #18 SMARCA4 (ENSIPUG00000016346) #19 ENSIPUG00000016428 #20 AP1M2 (ENSIPUG00000016495) #21 cdkn2d (ENSIPUG00000016566) #22 ENSIPUG00000016571 #23 keap1 (ENSIPUG00000016583) #24 S1pr1 (ENSIPUG00000016611) #25 fdx1l (ENSIPUG00000016629) #26 zglp1 (ENSIPUG00000016640) #27 ENSIPUG00000016647 ENSIPUG00000016654 #28 ENSIPUG00000016660 #29 ENSIPUG00000016677 #30 ENSIPUG00000016698 ENSIPUG00000016708 #31 hmox (ENSIPUG00000016729) #31 ENSIPUG00000016750 #31 ENSIPUG00000016778 #32 ENSIPUG00000016849 #33 Cyprinoidei ANCESTRAL SPECIES 103 ENSGT00950000183003.a.a.b.c.a ENSGT00530000064137.a.b ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b #35 ENSGT00940000157534.a.a #36 Cyprininae ANCESTRAL SPECIES 355 ENSGT00530000064137.a.b.z ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.a.b #20 ENSGT00940000159089.h #21 ENSGT00940000154819.a.b.c.b.a.a #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.e #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a.a.b #29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00940000156865.a.d #32 ENSGT00940000173517 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b.h.b #35 ENSGT00940000157534.a.a #36 Goldfish MODERN SPECIES 46 RTN4 (ENSCARG00000000505) mtif2 (ENSCARG00000000468) CCDC88A (ENSCARG00000000374) rps27a (ENSCARG00000000255) ENSCARG00000000231 ENSCARG00000000202 bcl11ab (ENSCARG00000000179) MBD5 (ENSCARG00000033452) ENSCARG00000033366 #15 bmerb1 (ENSCARG00000033238) #16 ENSCARG00000033227 ENSCARG00000033222 #18 SMARCA4 (ENSCARG00000033077) #19 ENSCARG00000032756 #20 ENSCARG00000032712 #21 CDKN2D (ENSCARG00000032699) #22 ENSCARG00000032693 #23 s1pr5b (ENSCARG00000032686) #25 ENSCARG00000032675 fdx2 (ENSCARG00000032658) #26 ENSCARG00000032634 #29 ENSCARG00000032626 #33 pde6ha (ENSCARG00000032617) #35 rbfox2 (ENSCARG00000032604) #36 atf4a (ENSCARG00000032592) #37 ENSCARG00000032576 ENSCARG00000032563 ENSCARG00000032553 MGAT3 (ENSCARG00000032516) TAB1 (ENSCARG00000031618) ENSCARG00000031577 Cyprininae_a ANCESTRAL SPECIES 326 ENSGT00950000183003.a.a.b.c.a ENSGT00530000064137.a.b.y ENSGT00730000111088.a #15 ENSGT00440000038745.b.j #16 ENSGT00390000002393 #17 ENSGT01100000263495.A.a.b.b.a.a.b.a #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.a.a #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.e #26 ENSGT00470000042444 #27 ENSGT00940000166140 #28 ENSGT00940000165343.c.a.b #29 ENSGT00940000165343.d ##29 ENSGT00390000012436.h #30 ENSGT01030000234881.c ENSGT00390000017673.b.k #31 ENSGT00940000156865.a.d #32 ENSGT00940000173517 ENSGT00930000151058 #34 ENSGT00390000013260.A.b.b.h.b #35 Golden-line barbel MODERN SPECIES 2027 ap1m2 (ENSSGRG00000007830) #21 CDKN2D (ENSSGRG00000007829) #22 ENSSGRG00000007828 #23 s1pr5b (ENSSGRG00000007826) #25 fdx2 (ENSSGRG00000007825) #26 Zebrafish MODERN SPECIES 21 ENSDARG00000112811 #18 MARF1 (ENSDARG00000115222) #17 bmerb1 (ENSDARG00000086706) #16 ENSDARG00000059581 sowahcb (ENSDARG00000059582) crygm4 (ENSDARG00000008219) SMARCA4 (ENSDARG00000104339) #19 ENSDARG00000026759 #20 ap1m2 (ENSDARG00000096454) #21 CDKN2D (ENSDARG00000094176) #22 ENSDARG00000078283 #23 keap1b (ENSDARG00000074634) #24 s1pr5b (ENSDARG00000052192) #25 fdx2 (ENSDARG00000052190) #26 zglp1 (ENSDARG00000067669) #27 ENSDARG00000110178 #28 TAB1 (ENSDARG00000036613) MGAT3 (ENSDARG00000036619) ENSDARG00000006544 ENSDARG00000091124 atf4a (ENSDARG00000111939) #37 rbfox2 (ENSDARG00000052182) #36 pde6ha (ENSDARG00000102558) #35 ENSDARG00000099309 ENSDARG00000103662 Clupeiformes ANCESTRAL SPECIES 52 ENSGT00390000007786.a.a ENSGT00940000153510.a ENSGT00940000161425 #7 ENSGT00390000010231 #8 ENSGT00940000156057.s.a #9 ENSGT00940000156448.a.a #10 ENSGT00940000160049 #11 ENSGT00390000016730 #12 ENSGT00730000111088.a #15 ENSGT00440000038745.b #16 ENSGT00390000002393 #17 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.h #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT01030000234881 ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00710000107036.a.b #33 ENSGT00930000151058 #34 Denticle herring MODERN SPECIES 13 RHBDF2 (ENSDCDG00000032294) AANAT (ENSDCDG00000032285) UBE2O (ENSDCDG00000032187) SPHK1 (ENSDCDG00000032173) cygb2 (ENSDCDG00000032167) PRPSAP1 (ENSDCDG00000032148) ENSDCDG00000032147 ddx17 (ENSDCDG00000031724) #11 NTAN1 (ENSDCDG00000031697) #12 ENSDCDG00000031688 #15 bmerb1 (ENSDCDG00000031691) #16 ENSDCDG00000031685 MARF1 (ENSDCDG00000031640) #17 ENSDCDG00000031330 #20 ap1m2 (ENSDCDG00000031255) #21 CDKN2D (ENSDCDG00000031251) #22 ENSDCDG00000031249 #23 keap1b (ENSDCDG00000031248) #24 fdx2 (ENSDCDG00000031244) #26 ENSDCDG00000031243 ENSDCDG00000031239 #28 ENSDCDG00000031238 #29 ENSDCDG00000031235 ENSDCDG00000031233 #30 HMOX1 (ENSDCDG00000031230) #31 ENSDCDG00000031228 ENSDCDG00000031224 #32 ENSDCDG00000031222 #33 ENSDCDG00000031221 #34 pde6ha (ENSDCDG00000031220) #35 pde6ha (ENSDCDG00000031217) #35 Atlantic herring MODERN SPECIES 18 ddx17 (ENSCHAG00000006115) #11 ENSCHAG00000009990 #12 ENSCHAG00000010135 #13 ENSCHAG00000010153 #13 ENSCHAG00000010171 #13 ENSCHAG00000010180 ENSCHAG00000010208 ENSCHAG00000010226 MPV17L (ENSCHAG00000010298) #15 bmerb1 (ENSCHAG00000010319) #16 MARF1 (ENSCHAG00000010402) #17 SMARCA4 (ENSCHAG00000011670) #19 ENSCHAG00000022687 #20 ENSCHAG00000025154 ap1m2 (ENSCHAG00000025169) #21 CDKN2D (ENSCHAG00000025438) #22 ENSCHAG00000025442 #23 keap1b (ENSCHAG00000025443) #24 s1pr5b (ENSCHAG00000025449) #25 fdx2 (ENSCHAG00000025451) #26 ENSCHAG00000025452 #27 foxd7 (ENSCHAG00000025453) ENSCHAG00000025457 #28 ENSCHAG00000025461 ##29 ENSCHAG00000025462 #30 ENSCHAG00000025464 HMOX1 (ENSCHAG00000025466) #31 ENSCHAG00000025474 ENSCHAG00000025482 #32 ENSCHAG00000025506 ENSCHAG00000025511 #34 Euteleosteomorpha ANCESTRAL SPECIES 136 ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Protacanthopterygii ANCESTRAL SPECIES 59 ENSGT00940000155809.o ENSGT00940000159529 ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b ENSGT00390000009265 ENSGT00940000156270 ENSGT00940000161451.a.a ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.a.a ENSGT00940000164506.b.a ENSGT00940000157552.s.a ENSGT00390000004368 ENSGT00390000000053.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 14 ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270 ENSGT00940000161451.a.a.d ENSGT00940000161451.a.a.c.b ENSGT00390000010768 ENSGT00940000157700.c.r ENSGT00530000063000.a.a.b.i.d ENSGT00940000157700.c.q ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b.d ENSGT00940000166140.a.a #28 ENSGT00940000165343.d ##29 ENSGT00390000012436.h.c #30 ENSGT00390000017673.b.k.d #31 ENSGT00940000166140.a.b #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h.d #30 ENSGT00390000017673.b.k.c.b #31 ENSGT00390000017673.b.k.c.a #31 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 33 ENSGT00940000155257.b.a ENSGT00940000155809.o.c ENSGT00940000159529.c.a ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b ENSGT00940000157700.c.r ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b.d ENSGT00940000166140.a.b #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h.c #30 ENSGT00390000017673.b.k.d #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a ENSGT00530000063926.b ENSGT00940000164506.b.a.e.a ENSGT00940000157552.s.a.a Salmo ANCESTRAL SPECIES 79 ENSGT00940000155257.b.a ENSGT00940000155809.o.c.b ENSGT00940000159529.c.b ENSGT00940000159529.c.a.e ENSGT00580000081628.j ENSGT01030000234642.a.a.d ENSGT00390000015948.b.c.b ENSGT00940000156270.e ENSGT00940000161451.a.a.c.a ENSGT00390000010768.h.b ENSGT00940000157700.c.r ENSGT00530000063000.a.a.b.j.g ENSGT00940000156887.b.i #19 ENSGT00940000154819.a.b.c.b.e #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.l #23 ENSGT00940000159543.a #24 ENSGT01050000244887.A.a.a.a.i.j #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.a.a #27 ENSGT00940000157140.b.b.b.d.a ENSGT00940000166140.a.a #28 ENSGT00940000165343.c.a.f #29 ENSGT00390000012436.h.d #30 ENSGT00940000163721.t.a ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a.a ENSGT00530000063926.b ENSGT00940000164506.a.a ENSGT00940000164506.b.a.e.a.a ENSGT00940000157552.s.a.a Atlantic salmon MODERN SPECIES 11 ADD3 (ENSSSAG00000000431) MXI1 (ENSSSAG00000028007) dusp5 (ENSSSAG00000007089) smc3 (ENSSSAG00000020922) RBM20 (ENSSSAG00000020216) pdcd4 (ENSSSAG00000012709) shoc2 (ENSSSAG00000010861) adra2a (ENSSSAG00000010836) ENSSSAG00000007380 ENSSSAG00000095214 ENSSSAG00000010449 ENSSSAG00000120604 ENSSSAG00000001534 #19 ENSSSAG00000000924 #20 ENSSSAG00000000837 #21 cdn2d (ENSSSAG00000000830) #22 ENSSSAG00000119700 #23 ENSSSAG00000101878 keap1b (ENSSSAG00000059599) #24 s1pr5b (ENSSSAG00000103422) #25 ENSSSAG00000112778 #27 ENSSSAG00000100662 ENSSSAG00000039388 #28 ENSSSAG00000039368 #29 ENSSSAG00000039415 #31 ENSSSAG00000094474 ENSSSAG00000090884 ENSSSAG00000119130 ENSSSAG00000000404 ENSSSAG00000000395 ENSSSAG00000115616 River trout MODERN SPECIES 31 mxi1 (ENSSTUG00000035932) dusp5 (ENSSTUG00000035949) smc3 (ENSSTUG00000035960) RBM20 (ENSSTUG00000036000) pdcd4b (ENSSTUG00000036027) bbip1 (ENSSTUG00000036752) shoc2 (ENSSTUG00000036759) adra2a (ENSSTUG00000036789) rnaseh2a (ENSSTUG00000036814) MAST1 (ENSSTUG00000036970) atg4da (ENSSTUG00000037257) SMARCA4 (ENSSTUG00000037345) #19 ENSSTUG00000040557 #20 ENSSTUG00000044422 AP1M2 (ENSSTUG00000044456) #21 CDKN2D (ENSSTUG00000044759) #22 ENSSTUG00000044764 #23 keap1b (ENSSTUG00000044774) #24 s1pr5b (ENSSTUG00000044895) #25 fdx2 (ENSSTUG00000044907) #26 ENSSTUG00000044914 #27 ENSSTUG00000044924 ENSSTUG00000044938 #28 ENSSTUG00000044941 #29 ENSSTUG00000044957 #30 ENSSTUG00000044969 #31 ENSSTUG00000045001 rnf11a (ENSSTUG00000045005) NFIX (ENSSTUG00000045022) dand5 (ENSSTUG00000045174) ENSSTUG00000045190 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000155809.o.c ENSGT01040000240969.a ENSGT00940000159529.c.a ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b ENSGT00940000157700.c.r ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k.a.a #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.c.a #27 ENSGT00940000157140.b.b.b.d.c ENSGT00940000166140.a.b #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h.c #30 ENSGT00390000017673.b.k.d #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a.d ENSGT00530000063926.b ENSGT00940000164506.b.a.f.b ENSGT00940000164506.a.a Oncorhynchus_a ANCESTRAL SPECIES 125 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT01030000235307 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b ENSGT00940000157700.c.r ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.f #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k.a.a #23 ENSGT00940000165948.k.a.b #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.d #27 ENSGT00940000157140.b.b.b.d.d ENSGT00940000166140.a.b #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h.d #30 ENSGT00390000017673.b.k.d.a #31 ENSGT00940000163721 ENSGT00390000012078.a.b.c ENSGT00950000182916.a.b.a.a.a.b.a.b.n ENSGT00530000063926.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 12 ENSOKIG00005028006 ENSOKIG00005027881 ENSOKIG00005027788 pld6 (ENSOKIG00005027774) ENSOKIG00005027761 PLPPR2 (ENSOKIG00005027738) mxi1 (ENSOKIG00005027709) ENSOKIG00005027703 ADD3 (ENSOKIG00005027429) ENSOKIG00005027383 ABAT (ENSOKIG00005025284) ENSOKIG00005025136 ENSOKIG00005025121 CREBBP (ENSOKIG00005025106) AP1M2 (ENSOKIG00005024414) #21 CDKN2D (ENSOKIG00005025085) #22 ENSOKIG00005024389 #23 keap1b (ENSOKIG00005024351) #24 ENSOKIG00005021476 #20 ENSOKIG00005021293 ENSOKIG00005021279 SHOC2 (ENSOKIG00005021256) ADRA2A (ENSOKIG00005021247) ENSOKIG00005021243 ENSOKIG00005021229 pdcd4b (ENSOKIG00005021221) ENSOKIG00005021207 ENSOKIG00005021195 ENSOKIG00005021147 #31 ENSOKIG00005021132 #30 ENSOKIG00005021118 #31 Coho salmon MODERN SPECIES ENSOKIG00005027574 ENSOKIG00005027567 ENSOKIG00005027553 RBM20 (ENSOKIG00005027529) pdcd4b (ENSOKIG00005026471) bbip1 (ENSOKIG00005026413) shoc2 (ENSOKIG00005026396) adra2a (ENSOKIG00005026391) rnaseh2a (ENSOKIG00005026346) ENSOKIG00005026329 MAST1 (ENSOKIG00005025942) atg4da (ENSOKIG00005025851) SMARCA4 (ENSOKIG00005024660) #19 ENSOKIG00005021547 #20 AP1M2 (ENSOKIG00005020441) #21 CDKN2D (ENSOKIG00005021389) #22 ENSOKIG00005020370 #23 keap1b (ENSOKIG00005020303) #24 s1pr5b (ENSOKIG00005020277) #25 fdx2 (ENSOKIG00005020273) #26 ENSOKIG00005020266 #27 ENSOKIG00005020244 ENSOKIG00005020238 #28 ENSOKIG00005020227 #29 ENSOKIG00005020215 #31 rnf11a (ENSOKIG00005020210) ENSOKIG00005020207 ENSOKIG00005020202 NFIX (ENSOKIG00005020079) dand5 (ENSOKIG00005020059) ENSOKIG00005009859 Rainbow trout MODERN SPECIES 4 dusp5 (ENSOMYG00000073914) smc3 (ENSOMYG00000071533) RBM20 (ENSOMYG00000063331) pdcd4b (ENSOMYG00000007073) bbip1 (ENSOMYG00000007091) shoc2 (ENSOMYG00000009051) adra2a (ENSOMYG00000009116) ENSOMYG00000032267 ENSOMYG00000076437 ENSOMYG00000006242 ENSOMYG00000069973 ENSOMYG00000060444 ENSOMYG00000009750 #19 ENSOMYG00000010728 #20 ENSOMYG00000011167 #21 ENSOMYG00000011413 #22 ENSOMYG00000011424 #23 keap1b (ENSOMYG00000011445) #24 s1pr5b (ENSOMYG00000066942) #25 fdx2 (ENSOMYG00000007009) #26 ENSOMYG00000065341 #27 ENSOMYG00000007049 ENSOMYG00000034636 #28 ENSOMYG00000034627 #29 ENSOMYG00000060084 ENSOMYG00000034574 #31 ENSOMYG00000011475 ENSOMYG00000067255 ENSOMYG00000075789 ENSOMYG00000011600 ENSOMYG00000039118 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000159801.B.c.b #22 Oncorhynchus ANCESTRAL SPECIES 495 ENSGT00940000159801.B.c.b #22 ENSGT00940000165948.k.a.b #23 Rainbow trout MODERN SPECIES 8 dusp5 (ENSOMYG00000049403) smc3 (ENSOMYG00000010295) RBM20 (ENSOMYG00000009882) pdcd4b (ENSOMYG00000009912) bbip1 (ENSOMYG00000009143) shoc2 (ENSOMYG00000050955) adra2a (ENSOMYG00000077571) ENSOMYG00000077793 ENSOMYG00000076744 ENSOMYG00000065508 ENSOMYG00000057174 ENSOMYG00000009349 ENSOMYG00000010588 #19 ENSOMYG00000056046 #20 ENSOMYG00000066058 #21 ENSOMYG00000056829 #22 ENSOMYG00000074612 #23 keap1b (ENSOMYG00000058246) #24 s1pr5b (ENSOMYG00000006845) #25 fdx2 (ENSOMYG00000048092) #26 ENSOMYG00000006941 #27 ENSOMYG00000007070 ENSOMYG00000070142 #28 ENSOMYG00000071344 #29 ENSOMYG00000076070 #30 ENSOMYG00000071975 #31 ENSOMYG00000060443 rnf11a (ENSOMYG00000043465) ENSOMYG00000050973 dand5 (ENSOMYG00000070027) ENSOMYG00000065896 Salmo ANCESTRAL SPECIES ENSGT00940000159801.B.c.b #22 River trout MODERN SPECIES 5 mxi1 (ENSSTUG00000046628) dusp5 (ENSSTUG00000046615) ENSSTUG00000046610 smc3 (ENSSTUG00000046554) RBM20 (ENSSTUG00000046530) pdcd4b (ENSSTUG00000046044) bbip1 (ENSSTUG00000046022) shoc2 (ENSSTUG00000045994) adra2a (ENSSTUG00000045983) rnaseh2a (ENSSTUG00000045957) MAST1 (ENSSTUG00000045793) atg4da (ENSSTUG00000045777) SMARCA4 (ENSSTUG00000043678) #19 ENSSTUG00000039191 #20 AP1M2 (ENSSTUG00000039048) #21 CDKN2D (ENSSTUG00000039035) #22 ENSSTUG00000039030 #23 keap1b (ENSSTUG00000038417) #24 s1pr5b (ENSSTUG00000038384) #25 fdx2 (ENSSTUG00000038372) #26 ENSSTUG00000038363 #27 ENSSTUG00000038340 ENSSTUG00000038333 #28 ENSSTUG00000038329 #29 ENSSTUG00000038318 #30 ENSSTUG00000038287 #31 rnf11a (ENSSTUG00000038274) NFIX (ENSSTUG00000038221) ENSSTUG00000038188 tspan34 (ENSSTUG00000038169) RAB3D (ENSSTUG00000038123) Huchen MODERN SPECIES 3210 ENSHHUG00000018989 #20 AP1M2 (ENSHHUG00000019047) #21 CDKN2D (ENSHHUG00000019167) #22 ENSHHUG00000019170 #23 keap1b (ENSHHUG00000019174) #24 s1pr5b (ENSHHUG00000019204) #25 Salmoninae ANCESTRAL SPECIES 1561 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 Huchen MODERN SPECIES 1637 ENSHHUG00000032783 ENSHHUG00000032785 ENSHHUG00000032788 ENSHHUG00000032790 SMARCA4 (ENSHHUG00000032794) #19 ENSHHUG00000033245 #20 AP1M2 (ENSHHUG00000034024) #21 CDKN2D (ENSHHUG00000034356) #22 ENSHHUG00000034366 #23 keap1b (ENSHHUG00000034372) #24 ENSHHUG00000034405 s1pr5b (ENSHHUG00000034409) #25 fdx2 (ENSHHUG00000034413) #26 ENSHHUG00000034416 ENSHHUG00000034422 Salmoninae_a ANCESTRAL SPECIES 500 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 Salmo ANCESTRAL SPECIES 75 ENSGT00940000155809.o.c.a ENSGT00940000159529.c.a.f ENSGT00580000081628.i ENSGT01030000234642.a.a.c ENSGT00390000015948.b.c.a ENSGT00940000156270.f ENSGT00940000161451.a.a.c.b ENSGT00390000010768.h.a ENSGT00390000009265 ENSGT00940000157700.c.q ENSGT00530000063000.a.a.b.j.h ENSGT00940000156887.b.j #19 ENSGT00940000154819.a.b.c.b.f #20 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k #23 ENSGT00940000159543.b #24 ENSGT01050000244887.A.a.a.a.i.i #25 ENSGT00940000161143.i.a #26 ENSGT00470000042444.b #27 ENSGT00940000157140.b.b.b.d.b ENSGT00940000166140.b #28 ENSGT00940000166140.a.b #28 ENSGT00940000165343.c.a.e #29 ENSGT00390000012436.h.c #30 ENSGT00390000017673.b.k.d #31 ENSGT00940000163721.t.b ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a.b ENSGT00940000164506.b.a.e.a.b ENSGT00940000157552.s.a.b Atlantic salmon MODERN SPECIES 3 MXI1 (ENSSSAG00000007073) dusp5 (ENSSSAG00000027885) smc3 (ENSSSAG00000007113) RBM20 (ENSSSAG00000007161) pdcd4b (ENSSSAG00000007194) shoc2 (ENSSSAG00000007350) ENSSSAG00000116566 adra2a (ENSSSAG00000007378) ENSSSAG00000007077 ENSSSAG00000007449 ENSSSAG00000007403 ENSSSAG00000007658 ENSSSAG00000007791 #19 ENSSSAG00000039549 #20 ENSSSAG00000059187 #21 ENSSSAG00000059525 #22 ENSSSAG00000059543 #23 keap1b (ENSSSAG00000000789) #24 s1pr5b (ENSSSAG00000109157) #25 ENSSSAG00000000748 #27 ENSSSAG00000063503 ENSSSAG00000000738 #28 ENSSSAG00000111482 ENSSSAG00000000734 #29 ENSSSAG00000105344 #30 ENSSSAG00000000719 #31 rnf11a (ENSSSAG00000000704) ENSSSAG00000000674 ENSSSAG00000109061 ENSSSAG00000119542 dand5 (ENSSSAG00000097215) Oncorhynchus ANCESTRAL SPECIES 319 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k.b #23 Oncorhynchus_a ANCESTRAL SPECIES 649 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k.b #23 Chinook salmon MODERN SPECIES 25 cbx6a (ENSOTSG00005044971) nptxrb (ENSOTSG00005044972) ENSOTSG00005044973 ENSOTSG00005044975 ENSOTSG00005044977 GOT1 (ENSOTSG00005044978) CNNM1 (ENSOTSG00005044980) hoga1 (ENSOTSG00005044985) NKX2-3 (ENSOTSG00005044988) slc25a28 (ENSOTSG00005044989) ENSOTSG00005044991 ENSOTSG00005044992 ENSOTSG00005044993 #19 ENSOTSG00005045011 #20 ap1m2 (ENSOTSG00005046503) #21 CDKN2D (ENSOTSG00005036322) #22 ENSOTSG00005036339 #23 keap1b (ENSOTSG00005036359) #24 KCNJ4 (ENSOTSG00005036361) SOX10 (ENSOTSG00005036362) si:dkey-43k4.3 (ENSOTSG00005036363) #8 ENSOTSG00005036364 #9 gga1 (ENSOTSG00005036367) #10 ENSOTSG00005037691 #12 get3 (ENSOTSG00005037717) BEST2 (ENSOTSG00005037719) JUNB (ENSOTSG00005037721) prdx2 (ENSOTSG00005037722) ENSOTSG00005037725 ptger1a (ENSOTSG00005037726) ilf3a (ENSOTSG00005037729) Northern pike MODERN SPECIES 8 mxi1 (ENSELUG00000000969) dusp5 (ENSELUG00000022779) smc3 (ENSELUG00000022873) RBM20 (ENSELUG00000022906) pdcd4b (ENSELUG00000022960) bbip1 (ENSELUG00000030082) shoc2 (ENSELUG00000023017) adra2a (ENSELUG00000023041) rnaseh2a (ENSELUG00000023079) MAST1 (ENSELUG00000023152) atg4da (ENSELUG00000023164) SMARCA4 (ENSELUG00000023232) #19 ENSELUG00000023242 #20 ENSELUG00000029870 ap1m2 (ENSELUG00000023282) #21 CDKN2D (ENSELUG00000023292) #22 ENSELUG00000023317 #23 keap1b (ENSELUG00000023382) #24 s1pr5b (ENSELUG00000023398) #25 fdx2 (ENSELUG00000023442) #26 ENSELUG00000023468 #27 ENSELUG00000023498 ENSELUG00000023503 #28 ENSELUG00000023533 #29 ENSELUG00000023550 hmox (ENSELUG00000023580) #31 rnf11a (ENSELUG00000032594) NFIX (ENSELUG00000023645) ENSELUG00000023674 dand5 (ENSELUG00000023679) ENSELUG00000029302 Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Cod MODERN SPECIES 16 ENSGMOG00000037137 serhl (ENSGMOG00000005458) Myg (ENSGMOG00000022467) ENSGMOG00000005495 zgc:158803 (ENSGMOG00000005508) ENSGMOG00000005537 ENSGMOG00000025230 ENSGMOG00000030910 ENSGMOG00000005629 ENSGMOG00000005650 ENSGMOG00000005677 ENSGMOG00000024902 ENSGMOG00000005756 #19 ENSGMOG00000017252 #20 ap1m2 (ENSGMOG00000017224) #21 ENSGMOG00000017215 #22 ENSGMOG00000017211 #23 keap1b (ENSGMOG00000017172) #24 ENSGMOG00000025173 ENSGMOG00000025550 ENSGMOG00000026676 ENSGMOG00000009442 ENSGMOG00000009456 ENSGMOG00000009476 ENSGMOG00000025336 ENSGMOG00000036296 ENSGMOG00000035376 ENSGMOG00000022935 ENSGMOG00000009754 ENSGMOG00000009669 ENSGMOG00000009712 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Pinecone sodierfish MODERN SPECIES mb (ENSMMDG00005024881) pane1 (ENSMMDG00005024880) zgc:158803 (ENSMMDG00005024878) smdt1b (ENSMMDG00005024877) ENSMMDG00005024876 ENSMMDG00005024875 SOX10 (ENSMMDG00005024874) rnaseh2a (ENSMMDG00005024873) ENSMMDG00005024872 ENSMMDG00005024871 ENSMMDG00005024870 atg4da (ENSMMDG00005024869) SMARCA4 (ENSMMDG00005024868) #19 ENSMMDG00005024867 #20 ap1m2 (ENSMMDG00005024866) #21 CDKN2D (ENSMMDG00005024865) #22 ENSMMDG00005024864 keap1b (ENSMMDG00005024863) #24 s1pr5b (ENSMMDG00005024862) #25 fdx2 (ENSMMDG00005024861) #26 zglp1 (ENSMMDG00005024860) #27 ENSMMDG00005024859 ENSMMDG00005024858 #28 ENSMMDG00005024857 #30 HMOX1 (ENSMMDG00005024856) #31 rnf11a (ENSMMDG00005024855) NFIX (ENSMMDG00005024854) dand5 (ENSMMDG00005024853) ENSMMDG00005024852 RAB3D (ENSMMDG00005024851) pld6 (ENSMMDG00005024850) Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Tiger tail seahorse MODERN SPECIES 518 ENSHCOG00000016359 ENSHCOG00000000458 zgc:158803 (ENSHCOG00000016391) ENSHCOG00000016398 ENSHCOG00000016404 KCNJ4 (ENSHCOG00000016525) ENSHCOG00000016569 rnaseh2a (ENSHCOG00000016593) ENSHCOG00000016696 MAST1 (ENSHCOG00000016730) atg4da (ENSHCOG00000016797) ENSHCOG00000016821 #19 ENSHCOG00000016836 #19 ENSHCOG00000016845 #20 ap1m2 (ENSHCOG00000016877) #21 CDKN2D (ENSHCOG00000016885) #22 ENSHCOG00000016889 #23 keap1b (ENSHCOG00000016897) #24 s1pr5b (ENSHCOG00000016900) #25 fdx2 (ENSHCOG00000016915) #26 ENSHCOG00000016944 #27 ENSHCOG00000016954 ENSHCOG00000016961 #28 ENSHCOG00000016983 #29 HMOX1 (ENSHCOG00000016995) #31 rnf11a (ENSHCOG00000017008) NFIX (ENSHCOG00000017088) dand5 (ENSHCOG00000017105) tspan34 (ENSHCOG00000017111) RAB3D (ENSHCOG00000017123) pld6 (ENSHCOG00000017130) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a #20 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Ovalentaria ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00940000165343.d ##29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Pomacentridae ANCESTRAL SPECIES 8 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Pomacentridae_A ANCESTRAL SPECIES ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Amphiprion ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT01090000261423 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00950000182916.a.b.a.a.a.b.b.a ENSGT00530000063926.b Orange clownfish MODERN SPECIES 17 mb (ENSAPEG00000022796) ENSAPEG00000022807 zgc:158803 (ENSAPEG00000022841) smdt1b (ENSAPEG00000022857) ENSAPEG00000022874 ENSAPEG00000022889 SOX10 (ENSAPEG00000022921) rnaseh2a (ENSAPEG00000022937) ENSAPEG00000022961 MAST1 (ENSAPEG00000022973) ENSAPEG00000023018 atg4da (ENSAPEG00000023035) SMARCA4 (ENSAPEG00000023108) #19 ENSAPEG00000023188 #20 ap1m2 (ENSAPEG00000023204) #21 CDKN2D (ENSAPEG00000023215) #22 ENSAPEG00000023218 #23 keap1b (ENSAPEG00000023223) #24 s1pr5b (ENSAPEG00000023229) #25 fdx2 (ENSAPEG00000023232) #26 ENSAPEG00000023241 #27 ENSAPEG00000023251 NEU3 (ENSAPEG00000023257) ENSAPEG00000023267 #28 ENSAPEG00000023300 #29 ENSAPEG00000023313 HMOX1 (ENSAPEG00000023325) #31 rnf11a (ENSAPEG00000023334) NFIX (ENSAPEG00000023351) dand5 (ENSAPEG00000023394) tspan34 (ENSAPEG00000023403) Clown anemonefish MODERN SPECIES 1044 mb (ENSAOCG00000008982) pane1 (ENSAOCG00000009012) zgc:158803 (ENSAOCG00000009085) smdt1b (ENSAOCG00000009097) ENSAOCG00000009111 ENSAOCG00000009131 SOX10 (ENSAOCG00000009184) rnaseh2a (ENSAOCG00000009217) ENSAOCG00000009239 ENSAOCG00000009261 MAST1 (ENSAOCG00000009348) atg4da (ENSAOCG00000009366) SMARCA4 (ENSAOCG00000009450) #19 ENSAOCG00000009468 #20 ap1m2 (ENSAOCG00000009505) #21 CDKN2D (ENSAOCG00000009517) #22 ENSAOCG00000002137 #23 keap1b (ENSAOCG00000009527) #24 s1pr5b (ENSAOCG00000009535) #25 fdx2 (ENSAOCG00000009574) #26 ENSAOCG00000009617 #27 ENSAOCG00000009625 Spiny chromis MODERN SPECIES 88 serhl (ENSAPOG00000000089) mb (ENSAPOG00000003952) pane1 (ENSAPOG00000003964) zgc:158803 (ENSAPOG00000003970) smdt1b (ENSAPOG00000003995) ENSAPOG00000004017 ENSAPOG00000004042 SOX10 (ENSAPOG00000004067) rnaseh2a (ENSAPOG00000004101) MAST1 (ENSAPOG00000004190) atg4da (ENSAPOG00000004347) atg4da (ENSAPOG00000004393) SMARCA4 (ENSAPOG00000004542) #19 ENSAPOG00000004583 #20 ap1m2 (ENSAPOG00000004630) #21 CDKN2D (ENSAPOG00000004642) #22 ENSAPOG00000000116 #23 keap1b (ENSAPOG00000004671) #24 s1pr5b (ENSAPOG00000004684) #25 fdx2 (ENSAPOG00000004692) #26 zglp1 (ENSAPOG00000004713) #27 ENSAPOG00000004728 ENSAPOG00000004745 ENSAPOG00000004766 #28 ENSAPOG00000004786 #29 HMOX1 (ENSAPOG00000004803) #31 rnf11a (ENSAPOG00000004817) NFIX (ENSAPOG00000004937) dand5 (ENSAPOG00000004996) ENSAPOG00000005041 Bicolor damselfish MODERN SPECIES 239 serhl (ENSSPAG00000013461) mb (ENSSPAG00000013443) ENSSPAG00000013408 zgc:158803 (ENSSPAG00000013318) ENSSPAG00000013302 ENSSPAG00000013289 ENSSPAG00000012865 SOX10 (ENSSPAG00000012804) rnaseh2a (ENSSPAG00000012769) ENSSPAG00000012759 MAST1 (ENSSPAG00000012704) atg4da (ENSSPAG00000012672) SMARCA4 (ENSSPAG00000012533) #19 ENSSPAG00000012489 #20 ap1m2 (ENSSPAG00000012447) #21 CDKN2D (ENSSPAG00000012438) #22 ENSSPAG00000012424 #23 keap1b (ENSSPAG00000012410) #24 s1pr5b (ENSSPAG00000012405) #25 fdx2 (ENSSPAG00000012392) #26 zglp1 (ENSSPAG00000012373) #27 ENSSPAG00000012365 ENSSPAG00000012355 ENSSPAG00000012346 NEU3 (ENSSPAG00000012338) ENSSPAG00000012330 #28 ENSSPAG00000012292 #29 HMOX1 (ENSSPAG00000012255) #31 rnf11a (ENSSPAG00000012240) NFIX (ENSSPAG00000012179) dand5 (ENSSPAG00000012165) Cichlidae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b #20 ENSGT00940000154819.a.b.c.b.c.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b #20 ENSGT00940000154819.a.b.c.b.c.a.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.f.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b #20 ENSGT00940000154819.a.b.c.b.c.a.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.f.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Haplochromini ANCESTRAL SPECIES 3 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.f.a ENSGT00950000182944.A.b.d.f.b ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Burton s mouthbrooder MODERN SPECIES 734 ENSHBUG00000005167 zgc:158803 (ENSHBUG00000005175) smdt1b (ENSHBUG00000005194) ENSHBUG00000005215 KCNJ4 (ENSHBUG00000005222) ENSHBUG00000005242 rnaseh2a (ENSHBUG00000005267) ENSHBUG00000005303 MAST1 (ENSHBUG00000005318) atg4da (ENSHBUG00000005336) SMARCA4 (ENSHBUG00000005447) #19 ENSHBUG00000005468 ENSHBUG00000005484 ENSHBUG00000006790 #20 ap1m2 (ENSHBUG00000006969) #21 CDKN2D (ENSHBUG00000006917) #22 ENSHBUG00000006982 #23 keap1b (ENSHBUG00000006989) #24 s1pr5b (ENSHBUG00000006993) #25 fdx2 (ENSHBUG00000007004) #26 ENSHBUG00000007015 #27 ENSHBUG00000007027 ENSHBUG00000007502 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.f.a ENSGT00950000182944.A.b.d.f.b ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a P. nyererei MODERN SPECIES 643 mb (ENSPNYG00000023965) ENSPNYG00000023967 zgc:158803 (ENSPNYG00000023971) smdt1b (ENSPNYG00000023975) KCNJ4 (ENSPNYG00000023978) ENSPNYG00000023985 rnaseh2a (ENSPNYG00000023986) ENSPNYG00000023987 ENSPNYG00000023988 MAST1 (ENSPNYG00000023989) atg4da (ENSPNYG00000023991) SMARCA4 (ENSPNYG00000023995) #19 ENSPNYG00000024000 #20 ENSPNYG00000024002 #20 ap1m2 (ENSPNYG00000024003) #21 CDKN2D (ENSPNYG00000024004) #22 ENSPNYG00000024006 #23 keap1b (ENSPNYG00000024008) #24 s1pr5b (ENSPNYG00000024012) #25 fdx2 (ENSPNYG00000024013) #26 zglp1 (ENSPNYG00000024014) #27 ENSPNYG00000024016 ENSPNYG00000024017 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.b #20 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.a #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.f.a ENSGT00950000182944.A.b.d.e ENSGT00950000182944.A.b.d.f.b ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00950000182916.a.b.a.a.a.b.b.a Eastern happy MODERN SPECIES 18 ENSACLG00000009285 smdt1b (ENSACLG00000009268) ENSACLG00000009244 ENSACLG00000009236 KCNJ4 (ENSACLG00000009229) ENSACLG00000009200 rnaseh2a (ENSACLG00000009169) ENSACLG00000009128 MAST1 (ENSACLG00000009080) atg4da (ENSACLG00000008714) SMARCA4 (ENSACLG00000008638) #19 ENSACLG00000008000 #20 ENSACLG00000007950 ENSACLG00000007886 #20 ap1m2 (ENSACLG00000007855) #21 CDKN2D (ENSACLG00000007877) #22 ENSACLG00000007845 #23 keap1b (ENSACLG00000007822) #24 s1pr5b (ENSACLG00000007818) #25 fdx2 (ENSACLG00000007805) #26 ENSACLG00000007782 #27 ENSACLG00000007772 ENSACLG00000007765 NEU3 (ENSACLG00000007762) NEU3 (ENSACLG00000007753) ENSACLG00000007748 #28 ENSACLG00000007737 #29 HMOX1 (ENSACLG00000007729) #31 rnf11a (ENSACLG00000007714) NFIX (ENSACLG00000007600) dand5 (ENSACLG00000007596) Zebra mbuna MODERN SPECIES 1109 zgc:158803 (ENSMZEG00005023852) smdt1b (ENSMZEG00005023853) ENSMZEG00005023854 KCNJ4 (ENSMZEG00005023855) ENSMZEG00005023856 rnaseh2a (ENSMZEG00005023857) ENSMZEG00005023858 ENSMZEG00005023859 atg4da (ENSMZEG00005023860) SMARCA4 (ENSMZEG00005023861) #19 ENSMZEG00005023862 ENSMZEG00005023863 #20 ENSMZEG00005023864 #20 ENSMZEG00005023865 ap1m2 (ENSMZEG00005023866) #21 CDKN2D (ENSMZEG00005023867) #22 ENSMZEG00005023868 #23 keap1b (ENSMZEG00005023869) #24 s1pr5b (ENSMZEG00005023870) #25 fdx2 (ENSMZEG00005023871) #26 ENSMZEG00005023872 #27 ENSMZEG00005023873 ENSMZEG00005023874 NEU3 (ENSMZEG00005023875) NEU3 (ENSMZEG00005023876) ENSMZEG00005023877 NFIX (ENSMZEG00005023878) dand5 (ENSMZEG00005023879) tspan34 (ENSMZEG00005023880) RAB3D (ENSMZEG00005023881) pld6 (ENSMZEG00005023882) Lyretail cichlid MODERN SPECIES 301 serhl (ENSNBRG00000018375) serhl (ENSNBRG00000018405) mb (ENSNBRG00000018430) ENSNBRG00000018440 zgc:158803 (ENSNBRG00000018476) smdt1b (ENSNBRG00000018490) KCNJ4 (ENSNBRG00000018518) ENSNBRG00000018705 rnaseh2a (ENSNBRG00000018731) MAST1 (ENSNBRG00000018757) atg4da (ENSNBRG00000018815) SMARCA4 (ENSNBRG00000018865) #19 ENSNBRG00000018933 #20 ENSNBRG00000018963 #20 ap1m2 (ENSNBRG00000019060) #21 CDKN2D (ENSNBRG00000019096) #22 ENSNBRG00000019117 #23 keap1b (ENSNBRG00000019129) #24 s1pr5b (ENSNBRG00000019138) #25 fdx2 (ENSNBRG00000019149) #26 zglp1 (ENSNBRG00000019171) #27 ENSNBRG00000019197 NEU3 (ENSNBRG00000019205) ENSNBRG00000019216 #28 ENSNBRG00000019223 ##29 HMOX1 (ENSNBRG00000019244) #31 rnf11a (ENSNBRG00000019250) NFIX (ENSNBRG00000019307) dand5 (ENSNBRG00000019412) tspan34 (ENSNBRG00000019428) RAB3D (ENSNBRG00000019454) Nile tilapia MODERN SPECIES 18 serhl (ENSONIG00000018014) serhl (ENSONIG00000018016) Mb (ENSONIG00000018018) ENSONIG00000018021 zgc:158803 (ENSONIG00000018025) smdt1b (ENSONIG00000036008) ENSONIG00000018028 KCNJ4 (ENSONIG00000018031) ENSONIG00000018032 rnaseh2a (ENSONIG00000018033) MAST1 (ENSONIG00000018034) atg4da (ENSONIG00000031738) SMARCA4 (ENSONIG00000018040) #19 ENSONIG00000018056 #20 ap1m2 (ENSONIG00000018060) #21 CDKN2D (ENSONIG00000032001) #22 ENSONIG00000018063 #23 keap1b (ENSONIG00000018066) #24 s1pr5b (ENSONIG00000021227) #25 fdx2 (ENSONIG00000018067) #26 ENSONIG00000033442 #27 ENSONIG00000018068 neu3e (ENSONIG00000018070) NEU3 (ENSONIG00000018069) ENSONIG00000028184 ENSONIG00000018071 #28 ENSONIG00000018073 #29 HMOX1 (ENSONIG00000018076) #31 rnf11a (ENSONIG00000037073) NFIX (ENSONIG00000018077) dand5 (ENSONIG00000018078) Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 595 ENSACIG00000008912 ENSACIG00000008905 bend5 (ENSACIG00000008860) ENSACIG00000008842 AGBL4 (ENSACIG00000008810) elavl4 (ENSACIG00000008793) dmrta2 (ENSACIG00000008749) faf1 (ENSACIG00000008712) ENSACIG00000008680 #22 rnf11b (ENSACIG00000008644) TTC39A (ENSACIG00000008612) EPS15 (ENSACIG00000008531) calr (ENSACIG00000008509) tor3a (ENSACIG00000008486) osbpl9 (ENSACIG00000008374) abl2 (ENSACIG00000008184) soat1 (ENSACIG00000008124) ENSACIG00000008065 ENSACIG00000008034 CACNA1E (ENSACIG00000007982) CEP350 (ENSACIG00000007837) qsox1 (ENSACIG00000007802) lhx4 (ENSACIG00000007782) acbd6 (ENSACIG00000007757) Midas cichlid MODERN SPECIES 1199 ENSACIG00000002373 serhl (ENSACIG00000002390) mb (ENSACIG00000002412) ENSACIG00000002427 zgc:158803 (ENSACIG00000002441) smdt1b (ENSACIG00000002454) KCNJ4 (ENSACIG00000002474) ENSACIG00000002643 rnaseh2a (ENSACIG00000002658) MAST1 (ENSACIG00000002693) atg4da (ENSACIG00000003005) SMARCA4 (ENSACIG00000003035) #19 ENSACIG00000003107 #20 ENSACIG00000003155 #20 ap1m2 (ENSACIG00000003239) #21 CDKN2D (ENSACIG00000003266) #22 ENSACIG00000003274 #23 keap1b (ENSACIG00000003284) #24 s1pr5b (ENSACIG00000003324) #25 fdx2 (ENSACIG00000003335) #26 zglp1 (ENSACIG00000003353) #27 ENSACIG00000003377 NEU3 (ENSACIG00000003385) ENSACIG00000003395 NEU3 (ENSACIG00000003415) NEU3 (ENSACIG00000003494) ENSACIG00000003519 #28 ENSACIG00000003529 HMOX1 (ENSACIG00000003536) #31 rnf11a (ENSACIG00000003661) NFIX (ENSACIG00000003674) Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Oryzias ANCESTRAL SPECIES 15 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Oryzias_a ANCESTRAL SPECIES 23 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00940000165833 ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Japanese Medaka HdrR MODERN SPECIES ENSORLG00000028999 serhl (ENSORLG00000004149) mb (ENSORLG00000026103) pane1 (ENSORLG00000004119) ENSORLG00000004110 smdt1b (ENSORLG00000004088) ENSORLG00000004082 ENSORLG00000004067 ENSORLG00000024031 rnaseh2a (ENSORLG00000004042) ENSORLG00000022445 atg4da (ENSORLG00000004021) ENSORLG00000003955 #19 ENSORLG00000003886 #20 ap1m2 (ENSORLG00000003846) #21 CDKN2D (ENSORLG00000003842) #22 ENSORLG00000003831 #23 ENSORLG00000027541 #23 keap1b (ENSORLG00000003823) #24 s1pr5b (ENSORLG00000003793) #25 fdx2 (ENSORLG00000029397) #26 ENSORLG00000024901 #27 ENSORLG00000003779 ENSORLG00000003776 #28 ENSORLG00000003769 #29 ENSORLG00000028289 #30 ENSORLG00000003753 #31 rnf11a (ENSORLG00000022986) NFIX (ENSORLG00000003734) dand5 (ENSORLG00000003690) tspan34 (ENSORLG00000003680) Chinese medaka MODERN SPECIES 272 ENSOSIG00000021706 serhl (ENSOSIG00000021711) mb (ENSOSIG00000021717) pane1 (ENSOSIG00000021730) ENSOSIG00000021748 ENSOSIG00000021753 ENSOSIG00000021756 ENSOSIG00000021766 SOX10 (ENSOSIG00000021784) rnaseh2a (ENSOSIG00000021790) MAST1 (ENSOSIG00000021971) atg4da (ENSOSIG00000022514) SMARCA4 (ENSOSIG00000022566) #19 ENSOSIG00000022637 #20 AP1M2 (ENSOSIG00000022846) #21 CDKN2D (ENSOSIG00000022850) #22 ENSOSIG00000022851 ENSOSIG00000022853 keap1b (ENSOSIG00000022855) #24 s1pr5b (ENSOSIG00000022856) #25 fdx2 (ENSOSIG00000022858) #26 ENSOSIG00000022860 #27 ENSOSIG00000022863 ENSOSIG00000022867 #28 ENSOSIG00000022869 #29 ENSOSIG00000022870 ##29 ENSOSIG00000000088 HMOX1 (ENSOSIG00000000100) #31 rnf11a (ENSOSIG00000000109) NFIX (ENSOSIG00000000182) dand5 (ENSOSIG00000000234) Oryzias_b ANCESTRAL SPECIES 29 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a ENSGT00390000004368 Javanese ricefish MODERN SPECIES septin3 (ENSOJAG00000018354) ENSOJAG00000018446 serhl (ENSOJAG00000018454) mb (ENSOJAG00000018470) ENSOJAG00000018485 zgc:158803 (ENSOJAG00000018496) smdt1b (ENSOJAG00000018524) ENSOJAG00000018533 ENSOJAG00000018551 SOX10 (ENSOJAG00000018558) rnaseh2a (ENSOJAG00000018576) MAST1 (ENSOJAG00000018779) atg4da (ENSOJAG00000020110) ENSOJAG00000020541 #20 ap1m2 (ENSOJAG00000021653) #21 CDKN2D (ENSOJAG00000021763) #22 ENSOJAG00000021769 #23 keap1b (ENSOJAG00000021777) #24 s1pr5b (ENSOJAG00000021789) #25 fdx2 (ENSOJAG00000021790) #26 ENSOJAG00000021795 #27 ENSOJAG00000021797 ENSOJAG00000021805 #28 ENSOJAG00000021807 #29 HMOX1 (ENSOJAG00000021814) #31 rnf11a (ENSOJAG00000021842) NFIX (ENSOJAG00000021867) dand5 (ENSOJAG00000021902) tspan34 (ENSOJAG00000021920) RAB3D (ENSOJAG00000021948) pld6 (ENSOJAG00000021963) Indian medaka MODERN SPECIES 21 ENSOMEG00000016237 serhl (ENSOMEG00000016261) mb (ENSOMEG00000016290) ENSOMEG00000016315 zgc:158803 (ENSOMEG00000016350) smdt1b (ENSOMEG00000016364) ENSOMEG00000016389 ENSOMEG00000016403 SOX10 (ENSOMEG00000016415) rnaseh2a (ENSOMEG00000016454) MAST1 (ENSOMEG00000000412) atg4da (ENSOMEG00000016515) SMARCA4 (ENSOMEG00000016626) #19 ENSOMEG00000000419 #20 ap1m2 (ENSOMEG00000016714) #21 CDKN2D (ENSOMEG00000016735) #22 ENSOMEG00000016757 #23 fdx2 (ENSOMEG00000000776) #26 ENSOMEG00000016799 #27 ENSOMEG00000016816 keap1b (ENSOMEG00000016855) #24 ENSOMEG00000016869 #28 ENSOMEG00000016899 #29 HMOX1 (ENSOMEG00000016914) #31 rnf11a (ENSOMEG00000016928) NFIX (ENSOMEG00000017131) dand5 (ENSOMEG00000017180) tspan34 (ENSOMEG00000017196) RAB3D (ENSOMEG00000017217) pld6 (ENSOMEG00000017243) elof1 (ENSOMEG00000017257) Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00940000153469.a.a.l ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Mangrove rivulus MODERN SPECIES 138 ENSKMAG00000020046 mb (ENSKMAG00000020029) ENSKMAG00000020017 zgc:158803 (ENSKMAG00000019994) ENSKMAG00000019985 ENSKMAG00000019930 ENSKMAG00000019899 KCNJ4 (ENSKMAG00000019890) SOX10 (ENSKMAG00000019870) rnaseh2a (ENSKMAG00000019829) MAST1 (ENSKMAG00000019681) atg4da (ENSKMAG00000019629) SMARCA4 (ENSKMAG00000019518) #19 ENSKMAG00000019458 #20 ap1m2 (ENSKMAG00000019421) #21 CDKN2D (ENSKMAG00000019404) #22 ENSKMAG00000019395 #23 keap1b (ENSKMAG00000019360) #24 s1pr5b (ENSKMAG00000019347) #25 fdx2 (ENSKMAG00000019336) #26 ENSKMAG00000019325 #27 ENSKMAG00000019315 ENSKMAG00000019305 ENSKMAG00000019283 #28 ENSKMAG00000019262 #29 ENSKMAG00000019249 #31 rnf11a (ENSKMAG00000019233) NFIX (ENSKMAG00000019092) dand5 (ENSKMAG00000019010) tspan34 (ENSKMAG00000018993) ENSKMAG00000018973 Turquoise killifish MODERN SPECIES 1617 MB (ENSNFUG00015018903) ENSNFUG00015018909 PANE1 (ENSNFUG00015018910) zgc:158803 (ENSNFUG00015018917) C3H22ORF32 (ENSNFUG00015018926) ENSNFUG00015018928 ENSNFUG00015018933 ENSNFUG00015018937 SOX10 (ENSNFUG00015018941) RNASEH2A (ENSNFUG00015018947) MAST1 (ENSNFUG00015019007) atg4da (ENSNFUG00015020523) SMARCA4 (ENSNFUG00015020530) #19 ENSNFUG00015020613 #20 ap1m2 (ENSNFUG00015022583) #21 Cdkn2d (ENSNFUG00015022781) #22 ENSNFUG00015022782 #23 LRRC8E (ENSNFUG00015022783) DDX5 (ENSNFUG00015022815) Nfu_g_1_013649 (ENSNFUG00015023104) ENSNFUG00015023110 TTBK1 (ENSNFUG00015023144) TPC3 (ENSNFUG00015023162) TMEM246 (ENSNFUG00015023205) LGALSLA (ENSNFUG00015023207) slc29a2 (ENSNFUG00015023212) PELI1A (ENSNFUG00015023219) vps54 (ENSNFUG00015023231) ugp2a (ENSNFUG00015023325) MDH1 (ENSNFUG00015023534) otx2a (ENSNFUG00015023572) Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Poeciliinae ANCESTRAL SPECIES 9 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Platyfish MODERN SPECIES 19 serhl (ENSXMAG00000006867) mb (ENSXMAG00000025476) ENSXMAG00000006894 zgc:158803 (ENSXMAG00000006903) ENSXMAG00000022941 ENSXMAG00000006923 ENSXMAG00000006940 ENSXMAG00000021473 rnaseh2a (ENSXMAG00000006953) ENSXMAG00000027436 MAST1 (ENSXMAG00000006970) atg4da (ENSXMAG00000007016) SMARCA4 (ENSXMAG00000007030) #19 ENSXMAG00000007105 #20 ap1m2 (ENSXMAG00000007151) #21 CDKN2D (ENSXMAG00000022409) #22 ENSXMAG00000007179 #23 keap1b (ENSXMAG00000021448) #24 s1pr5b (ENSXMAG00000019815) #25 fdx2 (ENSXMAG00000005511) #26 ENSXMAG00000020994 #27 ENSXMAG00000019816 ENSXMAG00000026103 ENSXMAG00000027376 #28 ENSXMAG00000025089 #29 ENSXMAG00000025662 #30 HMOX1 (ENSXMAG00000007220) #31 rnf11a (ENSXMAG00000022184) NFIX (ENSXMAG00000007238) dand5 (ENSXMAG00000017343) tspan34 (ENSXMAG00000024059) Poecilia ANCESTRAL SPECIES 6 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000165343.d ##29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Guppy DUPLICATION Guppy DUPLICATION Guppy MODERN SPECIES 456 ENSPREG00000020075 ENSPREG00000020055 ARHGAP39 (ENSPREG00000020019) ENSPREG00000019993 rad54l (ENSPREG00000019955) ENSPREG00000019898 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 #22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 #22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) Guppy MODERN SPECIES 456 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 #22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 #22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) qsox1 (ENSPREG00000017924) lhx4 (ENSPREG00000017901) acbd6 (ENSPREG00000017881) ENSPREG00000017843 sin3b (ENSPREG00000017772) haus5 (ENSPREG00000017687) Guppy MODERN SPECIES 439 tefm (ENSPREG00000015588) serhl (ENSPREG00000015573) mb (ENSPREG00000015563) ENSPREG00000015549 zgc:158803 (ENSPREG00000015528) smdt1b (ENSPREG00000015520) ENSPREG00000015510 ENSPREG00000015145 ENSPREG00000015036 rnaseh2a (ENSPREG00000015015) MAST1 (ENSPREG00000014975) atg4da (ENSPREG00000014939) SMARCA4 (ENSPREG00000014823) #19 ENSPREG00000014073 #20 ap1m2 (ENSPREG00000013898) #21 CDKN2D (ENSPREG00000013882) #22 ENSPREG00000013872 #23 keap1b (ENSPREG00000013858) #24 s1pr5b (ENSPREG00000013844) #25 fdx2 (ENSPREG00000013790) #26 ENSPREG00000013782 #27 ENSPREG00000013775 ENSPREG00000013771 ENSPREG00000013765 #28 ENSPREG00000013750 #29 HMOX1 (ENSPREG00000013545) #31 rnf11a (ENSPREG00000013482) NFIX (ENSPREG00000013386) dand5 (ENSPREG00000013337) tspan34 (ENSPREG00000013321) RAB3D (ENSPREG00000013308) NAME_6 ANCESTRAL SPECIES 47 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000165343.d ##29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Amazon molly DUPLICATION Amazon molly MODERN SPECIES 303 ENSPFOG00000004270 tax1bp3 (ENSPFOG00000004292) slc1a6 (ENSPFOG00000004310) ENSPFOG00000004463 pole4 (ENSPFOG00000004484) ENSPFOG00000004525 ccl25b (ENSPFOG00000004562) gclm (ENSPFOG00000004600) dnttip2 (ENSPFOG00000004653) spata6 (ENSPFOG00000023137) AGBL4 (ENSPFOG00000004717) bend5 (ENSPFOG00000004753) elavl4 (ENSPFOG00000004811) dmrta2 (ENSPFOG00000004939) faf1 (ENSPFOG00000004981) ENSPFOG00000005246 #22 rnf11b (ENSPFOG00000005255) TTC39A (ENSPFOG00000005356) EPS15 (ENSPFOG00000005835) calr (ENSPFOG00000005960) tor3a (ENSPFOG00000006170) osbpl9 (ENSPFOG00000006260) abl2 (ENSPFOG00000006669) soat1 (ENSPFOG00000006972) ENSPFOG00000007239 CACNA1E (ENSPFOG00000007877) CEP350 (ENSPFOG00000008359) qsox1 (ENSPFOG00000008535) lhx4 (ENSPFOG00000008745) lhx4 (ENSPFOG00000008766) acbd6 (ENSPFOG00000008788) Amazon molly MODERN SPECIES 295 serhl (ENSPFOG00000012304) mb (ENSPFOG00000012371) ENSPFOG00000012395 zgc:158803 (ENSPFOG00000012437) smdt1b (ENSPFOG00000012495) ENSPFOG00000012509 ENSPFOG00000021920 ENSPFOG00000012599 ENSPFOG00000012609 rnaseh2a (ENSPFOG00000012627) MAST1 (ENSPFOG00000012690) atg4da (ENSPFOG00000012852) SMARCA4 (ENSPFOG00000012930) #19 ENSPFOG00000013091 #20 ap1m2 (ENSPFOG00000023907) #21 CDKN2D (ENSPFOG00000013301) #22 ENSPFOG00000013303 #23 keap1b (ENSPFOG00000013318) #24 s1pr5b (ENSPFOG00000020141) #25 fdx2 (ENSPFOG00000013381) #26 ENSPFOG00000023655 ENSPFOG00000013392 ENSPFOG00000013394 #28 ENSPFOG00000013403 #29 ENSPFOG00000022531 ##29 HMOX1 (ENSPFOG00000013418) #31 rnf11a (ENSPFOG00000013436) NFIX (ENSPFOG00000013453) dand5 (ENSPFOG00000013550) tspan34 (ENSPFOG00000013561) RAB3D (ENSPFOG00000013657) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 438 dmrta2 (ENSPLAG00000005407) faf1 (ENSPLAG00000005394) ENSPLAG00000005359 #22 rnf11b (ENSPLAG00000005349) TTC39A (ENSPLAG00000005323) ENSPLAG00000005144 calr (ENSPLAG00000005102) tor3a (ENSPLAG00000005070) osbpl9 (ENSPLAG00000005021) abl2 (ENSPLAG00000004898) soat1 (ENSPLAG00000004885) Sailfin molly MODERN SPECIES 4 rnaseh2a (ENSPLAG00000018723) MAST1 (ENSPLAG00000018711) atg4da (ENSPLAG00000018657) SMARCA4 (ENSPLAG00000018616) #19 ENSPLAG00000018526 #20 ap1m2 (ENSPLAG00000018476) #21 CDKN2D (ENSPLAG00000018442) #22 ENSPLAG00000018432 #23 keap1b (ENSPLAG00000018426) #24 s1pr5b (ENSPLAG00000018413) #25 fdx2 (ENSPLAG00000018407) #26 ENSPLAG00000018403 #27 ENSPLAG00000018396 ENSPLAG00000018392 ENSPLAG00000018384 #28 ENSPLAG00000018376 #29 HMOX1 (ENSPLAG00000018364) #31 rnf11a (ENSPLAG00000018356) NFIX (ENSPLAG00000018337) dand5 (ENSPLAG00000018314) tspan34 (ENSPLAG00000018292) RAB3D (ENSPLAG00000018052) NAME_4 ANCESTRAL SPECIES 73 ENSGT00390000010581 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000165343.d ##29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a.d Sheepshead minnow MODERN SPECIES 1076 AP1M2 (ENSCVAG00000019645) #21 CDKN2D (ENSCVAG00000019607) #22 ENSCVAG00000019605 #23 keap1b (ENSCVAG00000019600) #24 s1pr5b (ENSCVAG00000019571) #25 ENSCVAG00000019565 klf4 (ENSCVAG00000019555) SNCA (ENSCVAG00000019542) ENSCVAG00000019418 nop14 (ENSCVAG00000019406) add1 (ENSCVAG00000019337) Mummichog MODERN SPECIES 399 serhl (ENSFHEG00000007585) mb (ENSFHEG00000007598) ENSFHEG00000007618 zgc:158803 (ENSFHEG00000007623) smdt1b (ENSFHEG00000007632) ENSFHEG00000007638 KCNJ4 (ENSFHEG00000007650) SOX10 (ENSFHEG00000007675) rnaseh2a (ENSFHEG00000007682) MAST1 (ENSFHEG00000007742) atg4da (ENSFHEG00000007752) SMARCA4 (ENSFHEG00000007902) #19 ENSFHEG00000007919 ENSFHEG00000007933 #20 ap1m2 (ENSFHEG00000007972) #21 CDKN2D (ENSFHEG00000007983) #22 ENSFHEG00000007992 #23 keap1b (ENSFHEG00000007996) #24 s1pr5b (ENSFHEG00000008004) #25 ENSFHEG00000008010 fdx2 (ENSFHEG00000008018) #26 ENSFHEG00000008045 #27 ENSFHEG00000008060 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Eupercaria ANCESTRAL SPECIES 2 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Tetraodontidae ANCESTRAL SPECIES 44 ENSGT00530000063960.g.b.f ENSGT00530000063960.g.b.e ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00940000175590 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a ENSGT00390000004368 Fugu MODERN SPECIES 8 ENSTRUG00000030710 serhl (ENSTRUG00000000033) mb (ENSTRUG00000000034) ENSTRUG00000000037 zgc:158803 (ENSTRUG00000000039) ENSTRUG00000026631 ENSTRUG00000030066 KCNJ4 (ENSTRUG00000027165) Sox10a (ENSTRUG00000033126) rnaseh2a (ENSTRUG00000000049) MAST1 (ENSTRUG00000001299) atg4da (ENSTRUG00000001314) ENSTRUG00000002369 #20 ENSTRUG00000033211 ap1m2 (ENSTRUG00000003149) #21 cdkn2D (ENSTRUG00000003739) #22 ENSTRUG00000003757 #23 keap1b (ENSTRUG00000003855) #24 s1pr5b (ENSTRUG00000004396) #25 fdx2 (ENSTRUG00000004468) #26 ENSTRUG00000019733 ENSTRUG00000019645 ENSTRUG00000021117 #28 ENSTRUG00000004540 #29 HMOX1 (ENSTRUG00000021266) #31 rnf11a (ENSTRUG00000027847) NFIX (ENSTRUG00000005030) charon (ENSTRUG00000005611) tspan34 (ENSTRUG00000025232) ENSTRUG00000005632 pld6 (ENSTRUG00000005778) Tetraodon MODERN SPECIES 10 atf7ip (ENSTNIG00000007160) septin3 (ENSTNIG00000004228) serhl (ENSTNIG00000005517) mb (ENSTNIG00000005518) ENSTNIG00000001651 zgc:158803 (ENSTNIG00000005519) ENSTNIG00000004530 KCNJ4 (ENSTNIG00000004531) ENSTNIG00000004532 rnaseh2a (ENSTNIG00000004533) MAST1 (ENSTNIG00000004534) atg4da (ENSTNIG00000004535) SMARCA4 (ENSTNIG00000004536) #19 ENSTNIG00000004537 #20 ap1m2 (ENSTNIG00000004538) #21 CDKN2D (ENSTNIG00000004539) #22 ENSTNIG00000004540 #23 keap1b (ENSTNIG00000004541) #24 s1pr5b (ENSTNIG00000004542) #25 ENSTNIG00000006132 ENSTNIG00000006133 #28 ENSTNIG00000006134 #29 HMOX1 (ENSTNIG00000006135) #31 rnf11a (ENSTNIG00000006136) ENSTNIG00000004024 NFIX (ENSTNIG00000003955) dand5 (ENSTNIG00000006075) tspan34 (ENSTNIG00000000549) ENSTNIG00000006074 pld6 (ENSTNIG00000006073) elof1 (ENSTNIG00000006072) Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00950000182944.A.b.c ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Ballan wrasse MODERN SPECIES 287 serhl (ENSLBEG00000019986) mb (ENSLBEG00000020009) serhl (ENSLBEG00000020032) pane1 (ENSLBEG00000020088) zgc:158803 (ENSLBEG00000020118) smdt1b (ENSLBEG00000020160) ENSLBEG00000020143 ENSLBEG00000020228 ENSLBEG00000020466 rnaseh2a (ENSLBEG00000020494) MAST1 (ENSLBEG00000020537) atg4da (ENSLBEG00000020609) SMARCA4 (ENSLBEG00000020655) #19 ENSLBEG00000020752 #20 ap1m2 (ENSLBEG00000020783) #21 CDKN2D (ENSLBEG00000020818) #22 ENSLBEG00000020827 #23 keap1b (ENSLBEG00000020837) #24 s1pr5b (ENSLBEG00000020859) #25 fdx2 (ENSLBEG00000020878) #26 ENSLBEG00000020889 ENSLBEG00000020905 NEU3 (ENSLBEG00000020919) NEU3 (ENSLBEG00000020937) NEU3 (ENSLBEG00000020949) NEU3 (ENSLBEG00000020961) ENSLBEG00000020977 #28 ENSLBEG00000020993 #29 HMOX1 (ENSLBEG00000021015) #31 rnf11a (ENSLBEG00000021032) NFIX (ENSLBEG00000021105) Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00950000182944.A.b.c ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00950000182944.A.b.c.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00950000182944.A.b.c.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Large yellow croaker MODERN SPECIES 481 serhl (ENSLCRG00005009226) serhl (ENSLCRG00005009224) mb (ENSLCRG00005009223) pane1 (ENSLCRG00005009220) zgc:158803 (ENSLCRG00005009217) smdt1b (ENSLCRG00005009216) ENSLCRG00005009215 KCNJ4 (ENSLCRG00005009214) SOX10 (ENSLCRG00005009213) rnaseh2a (ENSLCRG00005009186) MAST1 (ENSLCRG00005008792) atg4da (ENSLCRG00005008780) SMARCA4 (ENSLCRG00005007894) #19 ENSLCRG00005002982 #20 ap1m2 (ENSLCRG00005002656) #21 CDKN2D (ENSLCRG00005002639) #22 ENSLCRG00005002636 #23 keap1 (ENSLCRG00005002628) #24 s1pr5b (ENSLCRG00005002624) #25 fdx2 (ENSLCRG00005002620) #26 ENSLCRG00005002617 #27 ENSLCRG00005002614 NEU3 (ENSLCRG00005002612) ENSLCRG00005002559 NEU3 (ENSLCRG00005002553) ENSLCRG00005002548 #28 ENSLCRG00005002542 #29 ENSLCRG00005002538 #30 HMOX1 (ENSLCRG00005002532) #31 rnf11a (ENSLCRG00005002528) NFIX (ENSLCRG00005002487) Gilthead seabream MODERN SPECIES serhl (ENSSAUG00010025353) serhl (ENSSAUG00010025355) mb (ENSSAUG00010025356) ENSSAUG00010025357 zgc:158803 (ENSSAUG00010025358) smdt1b (ENSSAUG00010025359) ENSSAUG00010025362 KCNJ4 (ENSSAUG00010025363) SOX10 (ENSSAUG00010025364) rnaseh2a (ENSSAUG00010025366) MAST1 (ENSSAUG00010025373) atg4da (ENSSAUG00010025418) SMARCA4 (ENSSAUG00010025426) #19 ENSSAUG00010025464 #20 ap1m2 (ENSSAUG00010025874) #21 CDKN2D (ENSSAUG00010002999) #22 ENSSAUG00010003007 #23 keap1b (ENSSAUG00010003018) #24 s1pr5b (ENSSAUG00010003030) #25 fdx2 (ENSSAUG00010003033) #26 ENSSAUG00010003043 #27 NEU3 (ENSSAUG00010003053) ENSSAUG00010003057 #28 ENSSAUG00010003063 #29 HMOX1 (ENSSAUG00010003067) #31 rnf11a (ENSSAUG00010003075) NFIX (ENSSAUG00010003122) dand5 (ENSSAUG00010003827) tspan34 (ENSSAUG00010003831) ENSSAUG00010003832 pld6 (ENSSAUG00010003834) Perciformes ANCESTRAL SPECIES 2 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.c ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Cottioidei ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Lumpfish MODERN SPECIES ENSCLMG00005002697 mb (ENSCLMG00005002698) pane1 (ENSCLMG00005002699) zgc:158803 (ENSCLMG00005002700) smdt1b (ENSCLMG00005002701) ENSCLMG00005002702 ENSCLMG00005002703 ENSCLMG00005002704 rnaseh2a (ENSCLMG00005002705) ENSCLMG00005002707 ENSCLMG00005002709 atg4da (ENSCLMG00005002712) SMARCA4 (ENSCLMG00005002722) #19 ENSCLMG00005003849 #20 ap1m2 (ENSCLMG00005009306) #21 CDKN2D (ENSCLMG00005009709) #22 ENSCLMG00005009710 #23 keap1b (ENSCLMG00005009711) #24 s1pr5b (ENSCLMG00005009713) #25 fdx2 (ENSCLMG00005009714) #26 zglp1 (ENSCLMG00005009715) #27 ENSCLMG00005009716 ENSCLMG00005009717 #28 ENSCLMG00005009718 #29 ENSCLMG00005009719 #30 ENSCLMG00005009720 #31 rnf11a (ENSCLMG00005009721) NFIX (ENSCLMG00005009722) dand5 (ENSCLMG00005009726) tspan34 (ENSCLMG00005009728) RAB3D (ENSCLMG00005009866) Stickleback MODERN SPECIES 4 BFAR (ENSGACG00000019548) ENSGACG00000019547 ENSGACG00000019545 ears2 (ENSGACG00000019531) ENSGACG00000019529 ENSGACG00000019526 ENSGACG00000019523 GTF3C1 (ENSGACG00000019516) AXIN1 (ENSGACG00000019513) thumpd1 (ENSGACG00000019511) ENSGACG00000019510 ENSGACG00000019507 parn (ENSGACG00000019501) ENSGACG00000019500 #20 ap1m2 (ENSGACG00000019492) #21 CDKN2D (ENSGACG00000019491) #22 ENSGACG00000019488 #23 ENSGACG00000019487 ENSGACG00000019486 keap1b (ENSGACG00000019479) #24 s1pr5b (ENSGACG00000019478) #25 fdx2 (ENSGACG00000019477) #26 ENSGACG00000019476 #28 ENSGACG00000019475 #29 ENSGACG00000019473 ##29 HMOX1 (ENSGACG00000019469) #31 rnf11a (ENSGACG00000019466) ENSGACG00000019465 NFIX (ENSGACG00000019462) dand5 (ENSGACG00000019460) tspan34 (ENSGACG00000019454) Perciformes_a ANCESTRAL SPECIES ENSGT00530000063960.g.b.j.a ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.c ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000012436.h #30 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Pike perch MODERN SPECIES 69 serhl (ENSSLUG00000015075) serhl (ENSSLUG00000015079) mb (ENSSLUG00000015086) ENSSLUG00000015093 zgc:158803 (ENSSLUG00000015101) smdt1b (ENSSLUG00000015111) ENSSLUG00000015124 SOX10 (ENSSLUG00000015215) rnaseh2a (ENSSLUG00000015229) ENSSLUG00000015266 MAST1 (ENSSLUG00000015278) atg4da (ENSSLUG00000015299) SMARCA4 (ENSSLUG00000016006) #19 ENSSLUG00000023970 #20 ap1m2 (ENSSLUG00000024580) #21 CDKN2D (ENSSLUG00000024686) #22 ENSSLUG00000024687 #23 keap1b (ENSSLUG00000024692) #24 s1pr5b (ENSSLUG00000024694) #25 fdx2 (ENSSLUG00000024696) #26 ENSSLUG00000024697 #27 ENSSLUG00000024698 NEU3 (ENSSLUG00000024708) ENSSLUG00000024731 #29 ENSSLUG00000024733 #28 HMOX1 (ENSSLUG00000024735) #31 rnf11a (ENSSLUG00000024737) NFIX (ENSSLUG00000024749) dand5 (ENSSLUG00000024784) tspan34 (ENSSLUG00000024786) RAB3D (ENSSLUG00000024787) Channel bull blenny MODERN SPECIES serhl (ENSCGOG00000020536) mb (ENSCGOG00000020540) ENSCGOG00000020551 zgc:158803 (ENSCGOG00000020554) smdt1b (ENSCGOG00000020607) ENSCGOG00000020606 ENSCGOG00000020609 ENSCGOG00000020610 SOX10 (ENSCGOG00000020612) rnaseh2a (ENSCGOG00000020614) MAST1 (ENSCGOG00000020651) atg4da (ENSCGOG00000020669) SMARCA4 (ENSCGOG00000020723) #19 ENSCGOG00000021526 #20 ap1m2 (ENSCGOG00000021610) #21 CDKN2D (ENSCGOG00000021666) #22 ENSCGOG00000021669 #23 keap1b (ENSCGOG00000021671) #24 s1pr5b (ENSCGOG00000021673) #25 fdx2 (ENSCGOG00000021674) #26 ENSCGOG00000021676 #27 ENSCGOG00000021677 NEU3 (ENSCGOG00000021678) ENSCGOG00000021679 #28 ENSCGOG00000021681 #29 ENSCGOG00000021685 #30 HMOX1 (ENSCGOG00000021690) #31 rnf11a (ENSCGOG00000021688) NFIX (ENSCGOG00000021693) dand5 (ENSCGOG00000021720) tspan34 (ENSCGOG00000021722) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00940000165343.d ##29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b Carangaria ANCESTRAL SPECIES ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Carangaria_A ANCESTRAL SPECIES 14 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Seriola ANCESTRAL SPECIES 29 ENSGT00530000063960.g.b.a ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00950000182944.A.b.d.i ENSGT00950000182944.A.b.d.j ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a Yellowtail amberjack MODERN SPECIES 2982 serhl (ENSSLDG00000023844) serhl (ENSSLDG00000023833) mb (ENSSLDG00000023825) pane1 (ENSSLDG00000023816) zgc:158803 (ENSSLDG00000023807) smdt1b (ENSSLDG00000023802) ENSSLDG00000023792 ENSSLDG00000023789 SOX10 (ENSSLDG00000023781) rnaseh2a (ENSSLDG00000023766) MAST1 (ENSSLDG00000023742) atg4da (ENSSLDG00000023718) SMARCA4 (ENSSLDG00000023663) #19 ENSSLDG00000023644 #20 ap1m2 (ENSSLDG00000023631) #21 CDKN2D (ENSSLDG00000023627) #22 ENSSLDG00000023625 #23 keap1b (ENSSLDG00000023620) #24 s1pr5b (ENSSLDG00000023617) #25 fdx2 (ENSSLDG00000023600) #26 ENSSLDG00000023581 #27 ENSSLDG00000023572 NEU3 (ENSSLDG00000023565) NEU3 (ENSSLDG00000023560) ENSSLDG00000023552 #28 ENSSLDG00000023542 #29 HMOX1 (ENSSLDG00000023531) #31 rnf11a (ENSSLDG00000023520) NFIX (ENSSLDG00000023509) Greater amberjack MODERN SPECIES 214 ap1m2 (ENSSDUG00000023256) #21 CDKN2D (ENSSDUG00000023261) #22 ENSSDUG00000023263 #23 keap1b (ENSSDUG00000023265) #24 s1pr5b (ENSSDUG00000023268) #25 fdx2 (ENSSDUG00000023270) #26 ENSSDUG00000023273 #27 ENSSDUG00000023275 NEU3 (ENSSDUG00000023278) NEU3 (ENSSDUG00000023279) ENSSDUG00000023281 #28 ENSSDUG00000023284 #29 HMOX1 (ENSSDUG00000023292) #31 rnf11a (ENSSDUG00000023294) NFIX (ENSSDUG00000023300) dand5 (ENSSDUG00000023316) tspan34 (ENSSDUG00000023318) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 43 hsh2d (ENSLCAG00010027025) tax1bp3 (ENSLCAG00010027024) slc1a6 (ENSLCAG00010027021) ENSLCAG00010027020 pole4 (ENSLCAG00010027018) ENSLCAG00010027016 ccl25b (ENSLCAG00010027015) dnttip2 (ENSLCAG00010027011) spata6 (ENSLCAG00010027010) AGBL4 (ENSLCAG00010027008) bend5 (ENSLCAG00010027001) agbl4 (ENSLCAG00010026997) elavl4 (ENSLCAG00010026991) dmrta2 (ENSLCAG00010026986) faf1 (ENSLCAG00010026978) ENSLCAG00010026971 #22 rnf11b (ENSLCAG00010026970) TTC39A (ENSLCAG00010026966) ENSLCAG00010026955 calr (ENSLCAG00010026951) tor3a (ENSLCAG00010026949) osbpl9 (ENSLCAG00010026923) abl2 (ENSLCAG00010026920) soat1 (ENSLCAG00010026917) CACNA1E (ENSLCAG00010025963) ENSLCAG00010025365 qsox1 (ENSLCAG00010025349) lhx4 (ENSLCAG00010025342) acbd6 (ENSLCAG00010025337) xpr1a (ENSLCAG00010025321) sin3b (ENSLCAG00010025277) Barramundi perch MODERN SPECIES 113 ENSLCAG00010025898 serhl (ENSLCAG00010025881) mb (ENSLCAG00010025873) pane1 (ENSLCAG00010025871) zgc:158803 (ENSLCAG00010025868) smdt1b (ENSLCAG00010025863) ENSLCAG00010025859 ENSLCAG00010025857 SOX10 (ENSLCAG00010025851) rnaseh2a (ENSLCAG00010025845) MAST1 (ENSLCAG00010025816) atg4da (ENSLCAG00010025792) SMARCA4 (ENSLCAG00010025736) #19 ENSLCAG00010025594 #20 ap1m2 (ENSLCAG00010025411) #21 CDKN2D (ENSLCAG00010025359) #22 ENSLCAG00010025351 #23 keap1b (ENSLCAG00010025348) #24 s1pr5b (ENSLCAG00010025347) #25 fdx2 (ENSLCAG00010025344) #26 ENSLCAG00010025338 #27 ENSLCAG00010025336 ENSLCAG00010025333 ENSLCAG00010025331 ENSLCAG00010025327 ENSLCAG00010025325 ENSLCAG00010025324 ENSLCAG00010025320 #28 ENSLCAG00010025315 ##29 HMOX1 (ENSLCAG00010025306) #31 rnf11a (ENSLCAG00010025300) Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a ENSGT00390000004368 Tongue sole MODERN SPECIES 19 rgs12b (ENSCSEG00000014005) chrna6 (ENSCSEG00000013997) ENSCSEG00000013985 ENSCSEG00000013967 zgc:195282 (ENSCSEG00000013954) pi4k2b (ENSCSEG00000013924) htra3a (ENSCSEG00000013897) GPR78 (ENSCSEG00000013891) CPZ (ENSCSEG00000013882) hmx4 (ENSCSEG00000013877) hmx1 (ENSCSEG00000013871) adra2c (ENSCSEG00000013863) lrpap1 (ENSCSEG00000013834) DOK7 (ENSCSEG00000013814) ap1m2 (ENSCSEG00000013803) #21 CDKN2D (ENSCSEG00000013798) #22 ENSCSEG00000013791 #23 keap1b (ENSCSEG00000013786) #24 s1pr5b (ENSCSEG00000013780) #25 fdx2 (ENSCSEG00000013776) #26 ENSCSEG00000013771 #27 ENSCSEG00000013767 #28 ENSCSEG00000013762 #29 rnf11a (ENSCSEG00000013753) NFIX (ENSCSEG00000013646) dand5 (ENSCSEG00000013627) ENSCSEG00000013616 pld6 (ENSCSEG00000013610) elof1 (ENSCSEG00000013606) PLPPR2 (ENSCSEG00000013598) ENSCSEG00000013590 Turbot DUPLICATION Turbot MODERN SPECIES 3 acot11b (ENSSMAG00000007286) ssbp3b (ENSSMAG00000007250) dio1 (ENSSMAG00000007191) dio1 (ENSSMAG00000028072) ENSSMAG00000007156 ENSSMAG00000007119 ENSSMAG00000007069 ENSSMAG00000007049 dnttip2 (ENSSMAG00000007037) ENSSMAG00000026136 ENSSMAG00000007019 AGBL4 (ENSSMAG00000006977) elavl4 (ENSSMAG00000006881) dmrta2 (ENSSMAG00000006876) faf1 (ENSSMAG00000006842) ENSSMAG00000006636 #22 rnf11b (ENSSMAG00000030524) TTC39A (ENSSMAG00000006580) ENSSMAG00000006542 calr (ENSSMAG00000006479) tor3a (ENSSMAG00000006472) osbpl9 (ENSSMAG00000006210) abl2 (ENSSMAG00000006075) soat1 (ENSSMAG00000006059) ENSSMAG00000005967 ENSSMAG00000005761 ENSSMAG00000005776 CEP350 (ENSSMAG00000005713) qsox1 (ENSSMAG00000005701) lhx4 (ENSSMAG00000005678) acbd6 (ENSSMAG00000005658) Turbot MODERN SPECIES 20 septin3 (ENSSMAG00000013826) ENSSMAG00000021663 serhl (ENSSMAG00000021742) serhl (ENSSMAG00000013860) mb (ENSSMAG00000035935) ENSSMAG00000013896 zgc:158803 (ENSSMAG00000013905) ENSSMAG00000013932 ENSSMAG00000013938 ENSSMAG00000013959 ENSSMAG00000013970 ENSSMAG00000014004 ENSSMAG00000014050 ENSSMAG00000014211 #20 ap1m2 (ENSSMAG00000014240) #21 ENSSMAG00000030085 #22 ENSSMAG00000014293 #23 s1pr5b (ENSSMAG00000014302) #25 fdx2 (ENSSMAG00000014312) #26 ENSSMAG00000034429 #27 ENSSMAG00000014340 ENSSMAG00000014349 #28 ENSSMAG00000014359 #29 HO-1 (ENSSMAG00000030685) #31 rnf11a (ENSSMAG00000014402) ENSSMAG00000014430 dand5 (ENSSMAG00000014617) ENSSMAG00000014639 ENSSMAG00000014671 ENSSMAG00000014684 ENSSMAG00000027463 Anabantaria ANCESTRAL SPECIES 1 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00940000181262 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a Zig-zag eel MODERN SPECIES serhl (ENSMAMG00000003995) ENSMAMG00000004067 mb (ENSMAMG00000003974) ENSMAMG00000003936 zgc:158803 (ENSMAMG00000003914) ENSMAMG00000003891 ENSMAMG00000003879 ENSMAMG00000003152 ENSMAMG00000003107 ENSMAMG00000026089 ENSMAMG00000002992 ENSMAMG00000002970 ENSMAMG00000002841 #19 ENSMAMG00000002789 #20 ap1m2 (ENSMAMG00000002700) #21 ENSMAMG00000025026 #22 ENSMAMG00000002687 #23 keap1b (ENSMAMG00000002679) #24 s1pr5b (ENSMAMG00000002676) #25 fdx2 (ENSMAMG00000002665) #26 ENSMAMG00000025847 #27 ENSMAMG00000002648 ENSMAMG00000002631 #28 ENSMAMG00000027487 #29 ENSMAMG00000027973 ENSMAMG00000002595 #31 rnf11a (ENSMAMG00000027180) ENSMAMG00000002467 dand5 (ENSMAMG00000002436) ENSMAMG00000002427 ENSMAMG00000002400 Anabantoidei ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 ENSGT00940000157700.c ENSGT00530000063000.a.a.b.j ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a ENSGT00940000166140 #28 ENSGT00940000165343.c.a #29 ENSGT00390000017673.b.k #31 ENSGT00940000163721 ENSGT00950000182916.a.b.a.a.a.b.a.a ENSGT00530000063926.b ENSGT00940000164506.b.a ENSGT00940000157552.s.a ENSGT00390000004368 Climbing perch MODERN SPECIES serhl (ENSATEG00000000406) mb (ENSATEG00000000416) ENSATEG00000000430 zgc:158803 (ENSATEG00000000437) ENSATEG00000027300 ENSATEG00000000458 ENSATEG00000000464 ENSATEG00000000870 ENSATEG00000000908 ENSATEG00000000943 ENSATEG00000001031 ENSATEG00000001094 #19 ENSATEG00000002785 #20 ENSATEG00000002793 ap1m2 (ENSATEG00000002811) #21 ENSATEG00000002865 #22 keap1b (ENSATEG00000002872) #24 s1pr5b (ENSATEG00000002909) #25 fdx2 (ENSATEG00000002919) #26 ENSATEG00000026180 #27 ENSATEG00000025191 ENSATEG00000002944 #28 ENSATEG00000029628 #29 ENSATEG00000002962 #31 ENSATEG00000002973 NFIX (ENSATEG00000003018) ENSATEG00000003118 ENSATEG00000003157 ENSATEG00000003181 ENSATEG00000026771 ENSATEG00000029063 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 15 tax1bp3 (ENSBSLG00000006164) slc1a6 (ENSBSLG00000006168) ENSBSLG00000006186 pole4 (ENSBSLG00000006189) ENSBSLG00000006193 ccl25b (ENSBSLG00000006207) gclm (ENSBSLG00000006210) dnttip2 (ENSBSLG00000006215) ENSBSLG00000006218 ENSBSLG00000006219 AGBL4 (ENSBSLG00000006221) bend5 (ENSBSLG00000006226) elavl4 (ENSBSLG00000006228) dmrta2 (ENSBSLG00000006289) faf1 (ENSBSLG00000006832) ENSBSLG00000007629 #22 rnf11b (ENSBSLG00000007635) TTC39A (ENSBSLG00000007641) ENSBSLG00000007708 EPS15 (ENSBSLG00000007929) calr (ENSBSLG00000008939) tor3a (ENSBSLG00000009065) osbpl9 (ENSBSLG00000000740) abl2 (ENSBSLG00000000959) soat1 (ENSBSLG00000000984) soat1 (ENSBSLG00000001015) CACNA1E (ENSBSLG00000001891) CEP350 (ENSBSLG00000002121) qsox1 (ENSBSLG00000002125) lhx4 (ENSBSLG00000002126) acbd6 (ENSBSLG00000002171) Siamese fighting fish MODERN SPECIES mb (ENSBSLG00000009908) mettl14 (ENSBSLG00000009847) mb (ENSBSLG00000009826) ENSBSLG00000009814 zgc:158803 (ENSBSLG00000009773) smdt1b (ENSBSLG00000009756) ENSBSLG00000009704 KCNJ4 (ENSBSLG00000009531) ENSBSLG00000009520 rnaseh2a (ENSBSLG00000009501) ENSBSLG00000007984 atg4da (ENSBSLG00000007401) SMARCA4 (ENSBSLG00000007283) #19 ENSBSLG00000005904 #20 ap1m2 (ENSBSLG00000005447) #21 CDKN2D (ENSBSLG00000005390) #22 ENSBSLG00000005374 #23 keap1b (ENSBSLG00000005218) #24 s1pr5b (ENSBSLG00000005182) #25 fdx2 (ENSBSLG00000005155) #26 ENSBSLG00000005130 #27 ENSBSLG00000005116 ENSBSLG00000005091 #28 ENSBSLG00000005031 #29 HMOX1 (ENSBSLG00000004992) #31 rnf11a (ENSBSLG00000004959) NFIX (ENSBSLG00000016432) dand5 (ENSBSLG00000016422) tspan34 (ENSBSLG00000016418) ENSBSLG00000016412 pld6 (ENSBSLG00000016408) Osteoglossiformes ANCESTRAL SPECIES 41 ENSGT00390000012078.a.b ENSGT00940000163721 ENSGT00390000012267 ENSGT00390000003817.c ENSGT00940000161361 ENSGT00940000160152.m ENSGT00940000161195.a.a.a ENSGT00940000155828 ENSGT00390000010768 ENSGT00950000183144.B.db.a ENSGT00940000157700.a ENSGT00530000063000.a.a.b ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.d ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.l #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b ENSGT00940000166140 #28 ENSGT00940000165343 #29 ENSGT00390000012436.g ##30 ENSGT00390000017673.b.k #31 ENSGT00390000006009.b ENSGT00940000156865.a #32 ENSGT00940000162350.b.a ENSGT00940000162350.b.b ENSGT00710000107036.a.b #33 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 18 ENSSFOG00015014503 dhps (ENSSFOG00015028198) zgc:158403 (ENSSFOG00015014474) GADD45GIP1 (ENSSFOG00015024648) nfixb (ENSSFOG00015014321) trir (ENSSFOG00015028164) get3 (ENSSFOG00015027208) HOOK2 (ENSSFOG00015014239) junbb (ENSSFOG00015009655) ENSSFOG00015014054 rtbdn (ENSSFOG00015014018) MAST1 (ENSSFOG00015013958) ENSSFOG00015013947 smarca4a (ENSSFOG00015013823) ##19 ldlra (ENSSFOG00015013750) ##20 CDKN2D (ENSSFOG00015032731) #22 kri1 (ENSSFOG00015013646) spc24 (ENSSFOG00015013634) S1PR5 (ENSSFOG00015024243) #25 ENSSFOG00015013623 foxred2 (ENSSFOG00015013582) mcm5 (ENSSFOG00015013517) ENSSFOG00015013478 gcat (ENSSFOG00015013409) ddx47 (ENSSFOG00015013392) ENSSFOG00015027877 ##33 ENSSFOG00015013360 pde6ha (ENSSFOG00015032155) #35 ENSSFOG00015013307 ENSSFOG00015013291 ##36 ENSSFOG00015013268 Asian bonytongue MODERN SPECIES 12 rad23aa (ENSSFOG00015009506) rnf11a (ENSSFOG00015009524) TRIR (ENSSFOG00015025754) get3 (ENSSFOG00015009554) BEST2 (ENSSFOG00015009584) HOOK2 (ENSSFOG00015009620) JUNB (ENSSFOG00015031678) ENSSFOG00015009666 rnaseh2a (ENSSFOG00015009692) rtbdn (ENSSFOG00015009745) MAST1 (ENSSFOG00015009789) atg4da (ENSSFOG00015009908) SMARCA4 (ENSSFOG00015009921) #19 ENSSFOG00015010040 ##20 ap1m2 (ENSSFOG00015010047) #21 CDKN2D (ENSSFOG00015010093) #22 ENSSFOG00015010119 #23 keap1b (ENSSFOG00015010140) #24 ENSSFOG00015010170 #25 fdx2 (ENSSFOG00015030952) #26 ENSSFOG00015010183 #27 foxd7 (ENSSFOG00015010194) ENSSFOG00015031783 #28 ENSSFOG00015031199 #29 hmgxb4a (ENSSFOG00015010243) ##30 ENSSFOG00015010271 #31 ENSSFOG00015010320 TOM1 (ENSSFOG00015010332) #32 ENSSFOG00015010367 ENSSFOG00015010393 #33 ENSSFOG00015030975 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 305 trir (ENSPKIG00000008377) get3 (ENSPKIG00000008352) HOOK2 (ENSPKIG00000008237) junbb (ENSPKIG00000008190) ENSPKIG00000008169 MAST1 (ENSPKIG00000008007) smarca4a (ENSPKIG00000007770) ##19 ldlra (ENSPKIG00000007690) ##20 CDKN2D (ENSPKIG00000007669) #22 kri1 (ENSPKIG00000007632) spc24 (ENSPKIG00000007607) ENSPKIG00000007590 #25 foxd7 (ENSPKIG00000007581) ENSPKIG00000007563 #29 tmem205 (ENSPKIG00000007544) CNN1 (ENSPKIG00000007513) tlcd4b (ENSPKIG00000007483) plppr2a (ENSPKIG00000007463) ENSPKIG00000007453 ENSPKIG00000007434 ENSPKIG00000007418 SLC44A2 (ENSPKIG00000007358) gcdhb (ENSPKIG00000007270) syce2 (ENSPKIG00000007229) P. kingsleyae MODERN SPECIES 45 rad23aa (ENSPKIG00000009389) rnf11a (ENSPKIG00000009428) TRIR (ENSPKIG00000009548) get3 (ENSPKIG00000009567) BEST2 (ENSPKIG00000009609) HOOK2 (ENSPKIG00000009652) JUNB (ENSPKIG00000009704) PRDX2 (ENSPKIG00000009726) rnaseh2a (ENSPKIG00000009756) rtbdn (ENSPKIG00000009782) MAST1 (ENSPKIG00000009888) atg4da (ENSPKIG00000010015) SMARCA4 (ENSPKIG00000010087) #19 ENSPKIG00000010225 ##20 ap1m2 (ENSPKIG00000010279) #21 CDKN2D (ENSPKIG00000010335) #22 ENSPKIG00000010349 #23 keap1b (ENSPKIG00000010365) #24 ENSPKIG00000010381 #25 fdx2 (ENSPKIG00000010398) #26 zglp1 (ENSPKIG00000010420) #27 ENSPKIG00000010442 ENSPKIG00000010456 #28 ENSPKIG00000010465 #29 hmgxb4a (ENSPKIG00000010496) ##30 HMOX1 (ENSPKIG00000010541) #31 ENSPKIG00000010580 TOM1 (ENSPKIG00000010602) #32 ENSPKIG00000010635 ENSPKIG00000010650 ENSPKIG00000010668 #33 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 675 ptprn2 (ENSLOCG00000012419) DNAJB6 (ENSLOCG00000012427) ube3c (ENSLOCG00000012433) mnx1 (ENSLOCG00000012445) nom1 (ENSLOCG00000012452) lmbr1 (ENSLOCG00000012464) rnf32 (ENSLOCG00000012477) shha (ENSLOCG00000012487) RBM33 (ENSLOCG00000012490) cnpy1 (ENSLOCG00000012499) en2b (ENSLOCG00000012504) insig1 (ENSLOCG00000012507) htr5ab (ENSLOCG00000012511) paxip1 (ENSLOCG00000012517) dpp6b (ENSLOCG00000012531) ENSLOCG00000012548 #22 actr3b (ENSLOCG00000012554) XRCC2 (ENSLOCG00000012562) KMT2C (ENSLOCG00000012568) GALNT11 (ENSLOCG00000012580) prkag2a (ENSLOCG00000012585) cox4i1l (ENSLOCG00000012604) bcl2a (ENSLOCG00000012609) kdsr (ENSLOCG00000012611) vps4b (ENSLOCG00000012619) ENSLOCG00000012630 ZNF622 (ENSLOCG00000012640) MARCHF11 (ENSLOCG00000012646) ENSLOCG00000012650 BASP1 (ENSLOCG00000018160) adcy8 (ENSLOCG00000012663) Spotted gar MODERN SPECIES 672 nfixb (ENSLOCG00000007997) rad23aa (ENSLOCG00000007980) trir (ENSLOCG00000007974) get3 (ENSLOCG00000007957) BEST2 (ENSLOCG00000007943) hook2 (ENSLOCG00000007916) junbb (ENSLOCG00000018297) prdx2 (ENSLOCG00000007904) rnaseh2a (ENSLOCG00000007890) rtbdn (ENSLOCG00000007879) MAST1 (ENSLOCG00000007853) atg4da (ENSLOCG00000007842) smarca4a (ENSLOCG00000007820) #19 LDLR (ENSLOCG00000007795) ap1m2 (ENSLOCG00000007782) #21 CDKN2D (ENSLOCG00000007768) #22 kri1 (ENSLOCG00000007754) ENSLOCG00000007742 #23 spc24 (ENSLOCG00000007731) keap1b (ENSLOCG00000007721) #24 s1pr5b (ENSLOCG00000018296) #25 fdx2 (ENSLOCG00000007698) #26 ENSLOCG00000007686 #27 foxd7 (ENSLOCG00000018295) ecsit (ENSLOCG00000007679) ENSLOCG00000007669 #28 prkcsh (ENSLOCG00000007655) elavl3 (ENSLOCG00000007647) ENSLOCG00000007635 DOCK6 (ENSLOCG00000007613) kank2 (ENSLOCG00000007602) Reedfish MODERN SPECIES 8 ENSECRG00000022091 plppr2a (ENSECRG00000022103) tlcd4b (ENSECRG00000022121) CNN1 (ENSECRG00000022133) elof1 (ENSECRG00000022142) tmem205 (ENSECRG00000022157) pld6 (ENSECRG00000022167) rab3db (ENSECRG00000022173) epor (ENSECRG00000022187) ENSECRG00000022202 tspan35 (ENSECRG00000022210) nfixb (ENSECRG00000022267) LDLR (ENSECRG00000022353) smarca4a (ENSECRG00000022404) #19 ap1m2 (ENSECRG00000022504) #21 CDKN2D (ENSECRG00000022521) #22 kri1 (ENSECRG00000022529) ENSECRG00000022550 atg4da (ENSECRG00000022566) MAST1 (ENSECRG00000022588) rtbdn (ENSECRG00000016742) rnaseh2a (ENSECRG00000016753) PRDX2 (ENSECRG00000016770) junba (ENSECRG00000016788) hook2 (ENSECRG00000016806) BEST2 (ENSECRG00000016838) get3 (ENSECRG00000016877) trir (ENSECRG00000016949) rnf11a (ENSECRG00000016960) rad23aa (ENSECRG00000016975) ENSECRG00000017009 Sarcopterygii ANCESTRAL SPECIES 753 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 Tetrapoda ANCESTRAL SPECIES 45 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 ENSGT00390000005100 Amniota ANCESTRAL SPECIES 31 ENSGT00940000159313 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mammalia ANCESTRAL SPECIES 42 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 ENSGT00940000172524 ENSGT00390000005100 Theria ANCESTRAL SPECIES 29 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Eutheria ANCESTRAL SPECIES 27 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Laurasiatheria ANCESTRAL SPECIES 15 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Artiodactyla ANCESTRAL SPECIES 22 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Suina ANCESTRAL SPECIES 16 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Chacoan peccary MODERN SPECIES 770 ANGPTL8 (ENSCWAG00000019035) KANK2 (ENSCWAG00000019078) SPC24 (ENSCWAG00000019212) LDLR (ENSCWAG00000019244) SMARCA4 (ENSCWAG00000019349) #19 TIMM29 (ENSCWAG00000019409) YIPF2 (ENSCWAG00000019426) CARM1 (ENSCWAG00000019487) C19orf38 (ENSCWAG00000019636) TMED1 (ENSCWAG00000019663) DNM2 (ENSCWAG00000019692) QTRT1 (ENSCWAG00000019852) ILF3 (ENSCWAG00000019885) SLC44A2 (ENSCWAG00000019968) AP1M2 (ENSCWAG00000020120) #21 CDKN2D (ENSCWAG00000020167) #22 KRI1 (ENSCWAG00000003660) ATG4D (ENSCWAG00000003684) S1PR5 (ENSCWAG00000003701) #25 KEAP1 (ENSCWAG00000003719) #24 PDE4A (ENSCWAG00000003784) CDC37 (ENSCWAG00000004120) TYK2 (ENSCWAG00000004159) ENSCWAG00000004200 RAVER1 (ENSCWAG00000004238) FDX2 (ENSCWAG00000004322) #26 ENSCWAG00000004336 #27 ICAM5 (ENSCWAG00000004370) ICAM4 (ENSCWAG00000004447) ICAM1 (ENSCWAG00000004470) MRPL4 (ENSCWAG00000004503) Pig MODERN SPECIES 10 DOCK6 (ENSSSCG00000038604) KANK2 (ENSSSCG00000039194) SPC24 (ENSSSCG00000033444) LDLR (ENSSSCG00000028512) SMARCA4 (ENSSSCG00000013629) #19 TIMM29 (ENSSSCG00000013635) YIPF2 (ENSSSCG00000013634) CARM1 (ENSSSCG00000013633) C19orf38 (ENSSSCG00000013632) TMED1 (ENSSSCG00000038623) DNM2 (ENSSSCG00000013630) QTRT1 (ENSSSCG00000013637) ILF3 (ENSSSCG00000013638) SLC44A2 (ENSSSCG00000013639) AP1M2 (ENSSSCG00000025838) #21 CDKN2D (ENSSSCG00000013643) #22 KRI1 (ENSSSCG00000013644) ATG4D (ENSSSCG00000013645) S1PR5 (ENSSSCG00000028460) #25 KEAP1 (ENSSSCG00000023667) #24 PDE4A (ENSSSCG00000013642) CDC37 (ENSSSCG00000013647) TYK2 (ENSSSCG00000013648) ICAM3 (ENSSSCG00000013649) RAVER1 (ENSSSCG00000013650) FDX2 (ENSSSCG00000062738) #26 ZGLP1 (ENSSSCG00000025754) #27 ICAM5 (ENSSSCG00000013653) ICAM4 (ENSSSCG00000013654) ICAM1 (ENSSSCG00000013655) MRPL4 (ENSSSCG00000013656) Artiodactyla_a ANCESTRAL SPECIES 23 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Camelidae ANCESTRAL SPECIES 61 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Arabian camel MODERN SPECIES 14 DOCK6 (ENSCDRG00005011567) KANK2 (ENSCDRG00005011487) SPC24 (ENSCDRG00005011442) LDLR (ENSCDRG00005010935) SMARCA4 (ENSCDRG00005010495) #19 TIMM29 (ENSCDRG00005010442) YIPF2 (ENSCDRG00005010339) CARM1 (ENSCDRG00005009567) C19orf38 (ENSCDRG00005009399) TMED1 (ENSCDRG00005009300) DNM2 (ENSCDRG00005008985) QTRT1 (ENSCDRG00005008893) ILF3 (ENSCDRG00005008623) SLC44A2 (ENSCDRG00005007784) ENSCDRG00005007581 #21 CDKN2D (ENSCDRG00005007540) #22 ATG4D (ENSCDRG00005007407) S1PR5 (ENSCDRG00005007394) #25 KEAP1 (ENSCDRG00005007359) #24 PDE4A (ENSCDRG00005007237) CDC37 (ENSCDRG00005007169) TYK2 (ENSCDRG00005007070) ICAM3 (ENSCDRG00005007018) RAVER1 (ENSCDRG00005006900) FDX2 (ENSCDRG00005006823) #26 ENSCDRG00005006783 #27 ICAM5 (ENSCDRG00005006746) ICAM4 (ENSCDRG00005006691) ICAM1 (ENSCDRG00005006651) MRPL4 (ENSCDRG00005006515) S1PR2 (ENSCDRG00005006497) ##25 Alpaca MODERN SPECIES 4843 CDKN2D (ENSVPAG00000003329) #22 Artiodactyla_b ANCESTRAL SPECIES 23 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Cetacea ANCESTRAL SPECIES 1 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00940000155653.b.bb.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Odontoceti ANCESTRAL SPECIES 1 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00940000155653.b.bb.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00940000155653.b.bb.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Dolphin MODERN SPECIES 2623 AP1M2 (ENSTTRG00000008015) #21 CDKN2D (ENSTTRG00000008014) #22 KRI1 (ENSTTRG00000008013) KEAP1 (ENSTTRG00000008011) #24 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00940000155653.b.bb.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Monodontidae ANCESTRAL SPECIES 17 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00940000155653.b.bb.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Beluga whale MODERN SPECIES 62 KANK2 (ENSDLEG00000021672) SPC24 (ENSDLEG00000021677) LDLR (ENSDLEG00000021681) SMARCA4 (ENSDLEG00000021692) #19 ENSDLEG00000021713 TIMM29 (ENSDLEG00000021716) YIPF2 (ENSDLEG00000021720) CARM1 (ENSDLEG00000021724) ENSDLEG00000021729 TMED1 (ENSDLEG00000021734) DNM2 (ENSDLEG00000021738) QTRT1 (ENSDLEG00000007761) ILF3 (ENSDLEG00000007764) SLC44A2 (ENSDLEG00000007781) AP1M2 (ENSDLEG00000007808) #21 CDKN2D (ENSDLEG00000007864) #22 KRI1 (ENSDLEG00000007870) ATG4D (ENSDLEG00000007877) S1PR5 (ENSDLEG00000007878) #25 KEAP1 (ENSDLEG00000007880) #24 PDE4A (ENSDLEG00000007886) CDC37 (ENSDLEG00000007897) TYK2 (ENSDLEG00000007981) ICAM3 (ENSDLEG00000008009) RAVER1 (ENSDLEG00000008069) FDX2 (ENSDLEG00000008119) #26 ZGLP1 (ENSDLEG00000008184) #27 ICAM5 (ENSDLEG00000008273) ICAM4 (ENSDLEG00000008412) ICAM1 (ENSDLEG00000008458) MRPL4 (ENSDLEG00000008517) Narwhal MODERN SPECIES 298 KANK2 (ENSMMNG00015002422) SPC24 (ENSMMNG00015002404) LDLR (ENSMMNG00015002117) SMARCA4 (ENSMMNG00015001717) #19 ENSMMNG00015001640 TIMM29 (ENSMMNG00015001609) YIPF2 (ENSMMNG00015001562) CARM1 (ENSMMNG00015001462) C19orf38 (ENSMMNG00015001399) TMED1 (ENSMMNG00015001368) DNM2 (ENSMMNG00015001292) QTRT1 (ENSMMNG00015001130) ILF3 (ENSMMNG00015001074) SLC44A2 (ENSMMNG00015000973) AP1M2 (ENSMMNG00015000863) #21 CDKN2D (ENSMMNG00015000838) #22 KRI1 (ENSMMNG00015000795) ATG4D (ENSMMNG00015000763) S1PR5 (ENSMMNG00015000744) #25 KEAP1 (ENSMMNG00015000719) #24 PDE4A (ENSMMNG00015000552) CDC37 (ENSMMNG00015000345) TYK2 (ENSMMNG00015000290) ICAM3 (ENSMMNG00015000259) RAVER1 (ENSMMNG00015000152) FDX2 (ENSMMNG00015000085) #26 ENSMMNG00015000055 #27 ICAM5 (ENSMMNG00015021254) ICAM4 (ENSMMNG00015021245) ICAM1 (ENSMMNG00015021230) MRPL4 (ENSMMNG00015021211) Vaquita MODERN SPECIES 14 SPC24 (ENSPSNG00000001089) LDLR (ENSPSNG00000000981) ENSPSNG00000000892 #19 ENSPSNG00000000867 TIMM29 (ENSPSNG00000000852) YIPF2 (ENSPSNG00000000829) CARM1 (ENSPSNG00000000745) C19orf38 (ENSPSNG00000000687) ENSPSNG00000000673 TMED1 (ENSPSNG00000000656) DNM2 (ENSPSNG00000000544) QTRT1 (ENSPSNG00000000385) ILF3 (ENSPSNG00000000300) SLC44A2 (ENSPSNG00000000222) AP1M2 (ENSPSNG00000000086) #21 CDKN2D (ENSPSNG00000021264) #22 KRI1 (ENSPSNG00000021232) ATG4D (ENSPSNG00000021190) S1PR5 (ENSPSNG00000021161) #25 KEAP1 (ENSPSNG00000021144) #24 PDE4A (ENSPSNG00000020907) CDC37 (ENSPSNG00000020799) TYK2 (ENSPSNG00000020692) ICAM3 (ENSPSNG00000020411) RAVER1 (ENSPSNG00000020306) FDX2 (ENSPSNG00000020258) #26 ENSPSNG00000020238 #27 ICAM5 (ENSPSNG00000020176) ICAM4 (ENSPSNG00000020128) ICAM1 (ENSPSNG00000020091) MRPL4 (ENSPSNG00000020027) Sperm whale MODERN SPECIES 78 SLC44A2 (ENSPCTG00005014970) ENSPCTG00005015109 AP1M2 (ENSPCTG00005015228) #21 CDKN2D (ENSPCTG00005015270) #22 KRI1 (ENSPCTG00005015315) ATG4D (ENSPCTG00005015372) S1PR5 (ENSPCTG00005015527) #25 KEAP1 (ENSPCTG00005015546) #24 Blue whale MODERN SPECIES 14 KANK2 (ENSBMSG00010010566) SPC24 (ENSBMSG00010010607) LDLR (ENSBMSG00010010637) SMARCA4 (ENSBMSG00010010730) #19 ENSBMSG00010010816 TIMM29 (ENSBMSG00010010845) YIPF2 (ENSBMSG00010010869) CARM1 (ENSBMSG00010010948) C19orf38 (ENSBMSG00010011004) TMED1 (ENSBMSG00010011020) DNM2 (ENSBMSG00010011050) QTRT1 (ENSBMSG00010011150) ILF3 (ENSBMSG00010011185) SLC44A2 (ENSBMSG00010011271) AP1M2 (ENSBMSG00010011325) #21 CDKN2D (ENSBMSG00010011355) #22 KRI1 (ENSBMSG00010011370) ATG4D (ENSBMSG00010011422) S1PR5 (ENSBMSG00010011450) #25 KEAP1 (ENSBMSG00010011463) #24 PDE4A (ENSBMSG00010011522) CDC37 (ENSBMSG00010011605) TYK2 (ENSBMSG00010011619) ENSBMSG00010011643 RAVER1 (ENSBMSG00010011661) FDX2 (ENSBMSG00010011705) #26 ENSBMSG00010011722 #27 ICAM5 (ENSBMSG00010011788) ICAM4 (ENSBMSG00010011803) ICAM1 (ENSBMSG00010011829) MRPL4 (ENSBMSG00010011859) Pecora ANCESTRAL SPECIES ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a ENSGT00390000014512 Yarkand deer MODERN SPECIES 32 DOCK6 (ENSCHYG00000003494) KANK2 (ENSCHYG00000003426) SPC24 (ENSCHYG00000003413) LDLR (ENSCHYG00000003225) ENSCHYG00000003084 SMARCA4 (ENSCHYG00000003001) #19 ENSCHYG00000002972 YIPF2 (ENSCHYG00000002943) CARM1 (ENSCHYG00000002834) C19orf38 (ENSCHYG00000002801) TMED1 (ENSCHYG00000002770) DNM2 (ENSCHYG00000002577) ILF3 (ENSCHYG00000002410) SLC44A2 (ENSCHYG00000002236) AP1M2 (ENSCHYG00000002197) #21 CDKN2D (ENSCHYG00000002191) #22 KRI1 (ENSCHYG00000002126) ATG4D (ENSCHYG00000002100) S1PR5 (ENSCHYG00000002028) #25 KEAP1 (ENSCHYG00000002009) #24 PDE4A (ENSCHYG00000001936) ENSCHYG00000001887 TYK2 (ENSCHYG00000001767) ICAM3 (ENSCHYG00000001683) RAVER1 (ENSCHYG00000001635) FDX2 (ENSCHYG00000001580) #26 ZGLP1 (ENSCHYG00000001560) #27 ICAM5 (ENSCHYG00000001528) ICAM4 (ENSCHYG00000001512) ENSCHYG00000001506 MRPL4 (ENSCHYG00000001481) Percora_a ANCESTRAL SPECIES ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a Siberian musk deer MODERN SPECIES 1187 ENSMMSG00000015502 ENSMMSG00000015463 ENSMMSG00000015425 #21 CDKN2D (ENSMMSG00000015413) #22 KRI1 (ENSMMSG00000015359) ATG4D (ENSMMSG00000015299) ENSMMSG00000015283 S1PR5 (ENSMMSG00000015275) #25 KEAP1 (ENSMMSG00000015254) #24 PDE4A (ENSMMSG00000015222) CDC37 (ENSMMSG00000015195) Bovidae ANCESTRAL SPECIES ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a Caprinae ANCESTRAL SPECIES 3 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541.m ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a ENSGT00390000014512 Rambouillet Sheep MODERN SPECIES 21 DOCK6 (ENSOARG00020008022) KANK2 (ENSOARG00020007943) SPC24 (ENSOARG00020007874) LDLR (ENSOARG00020007651) SMARCA4 (ENSOARG00020007539) #19 TIMM29 (ENSOARG00020007507) YIPF2 (ENSOARG00020007419) CARM1 (ENSOARG00020007076) C19orf38 (ENSOARG00020006962) TMED1 (ENSOARG00020006915) DNM2 (ENSOARG00020006664) QTRT1 (ENSOARG00020006553) ILF3 (ENSOARG00020005811) ENSOARG00020005505 AP1M2 (ENSOARG00020005364) #21 CDKN2D (ENSOARG00020005338) #22 KRI1 (ENSOARG00020005100) ATG4D (ENSOARG00020005015) S1PR5 (ENSOARG00020004996) #25 KEAP1 (ENSOARG00020004964) #24 PDE4A (ENSOARG00020004490) CDC37 (ENSOARG00020004409) TYK2 (ENSOARG00020004293) ICAM3 (ENSOARG00020004268) RAVER1 (ENSOARG00020004220) FDX2 (ENSOARG00020004158) #26 ENSOARG00020004133 #27 ICAM5 (ENSOARG00020004084) ICAM4 (ENSOARG00020004056) ICAM1 (ENSOARG00020003991) MRPL4 (ENSOARG00020003926) Goat MODERN SPECIES 26 KANK2 (ENSCHIG00000017311) SPC24 (ENSCHIG00000021502) LDLR (ENSCHIG00000019614) SMARCA4 (ENSCHIG00000015318) #19 ENSCHIG00000008021 YIPF2 (ENSCHIG00000017268) CARM1 (ENSCHIG00000008507) C19orf38 (ENSCHIG00000016641) TMED1 (ENSCHIG00000026595) DNM2 (ENSCHIG00000025917) QTRT1 (ENSCHIG00000014137) ILF3 (ENSCHIG00000024731) SLC44A2 (ENSCHIG00000005817) ENSCHIG00000008328 AP1M2 (ENSCHIG00000013386) #21 CDKN2D (ENSCHIG00000019940) #22 KRI1 (ENSCHIG00000011851) ATG4D (ENSCHIG00000017777) ENSCHIG00000018242 S1PR5 (ENSCHIG00000013199) #25 KEAP1 (ENSCHIG00000012093) #24 PDE4A (ENSCHIG00000020219) CDC37 (ENSCHIG00000000718) ENSCHIG00000000917 TYK2 (ENSCHIG00000018652) ICAM3 (ENSCHIG00000008833) RAVER1 (ENSCHIG00000006718) FDX2 (ENSCHIG00000026261) #26 ZGLP1 (ENSCHIG00000017287) #27 ICAM5 (ENSCHIG00000024600) ICAM4 (ENSCHIG00000006891) Bovinae ANCESTRAL SPECIES 2 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a American bison MODERN SPECIES 3349 DOCK6 (ENSBBBG00000017685) ANGPTL8 (ENSBBBG00000004365) KANK2 (ENSBBBG00000017612) SPC24 (ENSBBBG00000017574) LDLR (ENSBBBG00000017534) SMARCA4 (ENSBBBG00000017202) #19 YIPF2 (ENSBBBG00000000756) CARM1 (ENSBBBG00000016525) C19orf38 (ENSBBBG00000004061) TMED1 (ENSBBBG00000004053) DNM2 (ENSBBBG00000016364) QTRT1 (ENSBBBG00000016137) ILF3 (ENSBBBG00000016084) SLC44A2 (ENSBBBG00000015812) AP1M2 (ENSBBBG00000015730) #21 CDKN2D (ENSBBBG00000015703) #22 KRI1 (ENSBBBG00000015696) ATG4D (ENSBBBG00000015641) ENSBBBG00000003902 S1PR5 (ENSBBBG00000003420) #25 KEAP1 (ENSBBBG00000003432) #24 PDE4A (ENSBBBG00000003458) CDC37 (ENSBBBG00000003882) TYK2 (ENSBBBG00000003878) ICAM3 (ENSBBBG00000015517) RAVER1 (ENSBBBG00000015499) FDX2 (ENSBBBG00000015465) #26 ENSBBBG00000015460 #27 ICAM5 (ENSBBBG00000003849) ICAM4 (ENSBBBG00000003843) ICAM1 (ENSBBBG00000015412) Bos ANCESTRAL SPECIES 3 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a Bos_b ANCESTRAL SPECIES 2 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a Hybrid Bos Indicus MODERN SPECIES 26 ANGPTL8 (ENSBIXG00005028441) KANK2 (ENSBIXG00005028402) SPC24 (ENSBIXG00005028379) LDLR (ENSBIXG00005004873) SMARCA4 (ENSBIXG00005028150) #19 TIMM29 (ENSBIXG00005004808) YIPF2 (ENSBIXG00005027965) CARM1 (ENSBIXG00005004797) C19orf38 (ENSBIXG00005006957) TMED1 (ENSBIXG00005027829) DNM2 (ENSBIXG00005027715) QTRT1 (ENSBIXG00005027486) ILF3 (ENSBIXG00005027423) SLC44A2 (ENSBIXG00005027228) AP1M2 (ENSBIXG00005027157) #21 CDKN2D (ENSBIXG00005027099) #22 KRI1 (ENSBIXG00005027063) ATG4D (ENSBIXG00005004641) ENSBIXG00005027013 S1PR5 (ENSBIXG00005026991) #25 KEAP1 (ENSBIXG00005026956) #24 PDE4A (ENSBIXG00005026880) CDC37 (ENSBIXG00005026794) TYK2 (ENSBIXG00005004567) ICAM3 (ENSBIXG00005026686) RAVER1 (ENSBIXG00005026635) FDX2 (ENSBIXG00005026494) #26 ZGLP1 (ENSBIXG00005007249) #27 ICAM5 (ENSBIXG00005026475) ICAM4 (ENSBIXG00005026456) ENSBIXG00005026437 Cow MODERN SPECIES 26 KANK2 (ENSBTAG00000009568) SPC24 (ENSBTAG00000006185) LDLR (ENSBTAG00000012314) SMARCA4 (ENSBTAG00000019220) #19 TIMM29 (ENSBTAG00000045893) YIPF2 (ENSBTAG00000025606) CARM1 (ENSBTAG00000012048) C7H19orf38 (ENSBTAG00000004224) TMED1 (ENSBTAG00000010968) DNM2 (ENSBTAG00000013362) QTRT1 (ENSBTAG00000037941) ENSBTAG00000051140 ILF3 (ENSBTAG00000040076) SLC44A2 (ENSBTAG00000002628) AP1M2 (ENSBTAG00000021160) #21 CDKN2D (ENSBTAG00000010731) #22 KRI1 (ENSBTAG00000010729) ATG4D (ENSBTAG00000010727) ENSBTAG00000051490 S1PR5 (ENSBTAG00000003544) #25 KEAP1 (ENSBTAG00000003543) #24 PDE4A (ENSBTAG00000012032) CDC37 (ENSBTAG00000011699) TYK2 (ENSBTAG00000011698) ICAM3 (ENSBTAG00000015742) RAVER1 (ENSBTAG00000015721) FDX2 (ENSBTAG00000010318) #26 ZGLP1 (ENSBTAG00000038976) #27 ICAM5 (ENSBTAG00000010316) ICAM4 (ENSBTAG00000010314) ICAM1 (ENSBTAG00000010303) Bos_a ANCESTRAL SPECIES 2 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00390000003710.d.c.b.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311.c.a Domestic yak MODERN SPECIES 27 DOCK6 (ENSBGRG00000010747) KANK2 (ENSBGRG00000010574) SPC24 (ENSBGRG00000010532) LDLR (ENSBGRG00000005861) SMARCA4 (ENSBGRG00000005725) #19 TIMM29 (ENSBGRG00000005681) YIPF2 (ENSBGRG00000005541) CARM1 (ENSBGRG00000005309) C19orf38 (ENSBGRG00000005246) TMED1 (ENSBGRG00000005206) DNM2 (ENSBGRG00000004270) QTRT1 (ENSBGRG00000004106) ILF3 (ENSBGRG00000003981) SLC44A2 (ENSBGRG00000003649) AP1M2 (ENSBGRG00000003553) #21 CDKN2D (ENSBGRG00000003538) #22 KRI1 (ENSBGRG00000003495) ATG4D (ENSBGRG00000003396) ENSBGRG00000003351 S1PR5 (ENSBGRG00000003343) #25 ENSBGRG00000003338 #24 PDE4A (ENSBGRG00000003241) CDC37 (ENSBGRG00000003152) TYK2 (ENSBGRG00000003025) ICAM3 (ENSBGRG00000002967) RAVER1 (ENSBGRG00000002843) FDX2 (ENSBGRG00000002821) #26 ZGLP1 (ENSBGRG00000002807) #27 ICAM5 (ENSBGRG00000002740) ICAM4 (ENSBGRG00000002716) ENSBGRG00000002625 Wild yak MODERN SPECIES 347 ANGPTL8 (ENSBMUG00000000563) KANK2 (ENSBMUG00000000651) SPC24 (ENSBMUG00000000674) LDLR (ENSBMUG00000000872) SMARCA4 (ENSBMUG00000001526) #19 TIMM29 (ENSBMUG00000002186) YIPF2 (ENSBMUG00000002282) CARM1 (ENSBMUG00000003201) C19orf38 (ENSBMUG00000003745) TMED1 (ENSBMUG00000003776) DNM2 (ENSBMUG00000003859) QTRT1 (ENSBMUG00000003900) ILF3 (ENSBMUG00000004135) SLC44A2 (ENSBMUG00000004323) AP1M2 (ENSBMUG00000004367) #21 CDKN2D (ENSBMUG00000004379) #22 KRI1 (ENSBMUG00000004481) ATG4D (ENSBMUG00000004558) ENSBMUG00000004581 S1PR5 (ENSBMUG00000004599) #25 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Carnivora ANCESTRAL SPECIES 6 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Felidae ANCESTRAL SPECIES 21 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Cat MODERN SPECIES 1 DOCK6 (ENSFCAG00000004899) KANK2 (ENSFCAG00000004898) SPC24 (ENSFCAG00000037284) LDLR (ENSFCAG00000004895) SMARCA4 (ENSFCAG00000004894) #19 TIMM29 (ENSFCAG00000045120) YIPF2 (ENSFCAG00000027596) CARM1 (ENSFCAG00000004893) CA2H19orf38 (ENSFCAG00000018213) TMED1 (ENSFCAG00000032603) DNM2 (ENSFCAG00000004892) QTRT1 (ENSFCAG00000026012) ILF3 (ENSFCAG00000004887) SLC44A2 (ENSFCAG00000004885) AP1M2 (ENSFCAG00000004258) #21 CDKN2D (ENSFCAG00000022117) #22 KRI1 (ENSFCAG00000004884) ATG4D (ENSFCAG00000004883) S1PR5 (ENSFCAG00000031632) #25 KEAP1 (ENSFCAG00000012518) #24 PDE4A (ENSFCAG00000004881) ENSFCAG00000009437 TYK2 (ENSFCAG00000009436) ICAM3 (ENSFCAG00000029803) RAVER1 (ENSFCAG00000009435) FDX2 (ENSFCAG00000009434) #26 ZGLP1 (ENSFCAG00000031808) #27 ICAM5 (ENSFCAG00000009433) ICAM4 (ENSFCAG00000009432) ICAM1 (ENSFCAG00000009431) MRPL4 (ENSFCAG00000043071) Panthera ANCESTRAL SPECIES 15 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00940000170960 ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Panthera_a ANCESTRAL SPECIES ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00940000170960 ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 lion MODERN SPECIES 2 SPC24 (ENSPLOG00000010737) LDLR (ENSPLOG00000010631) SMARCA4 (ENSPLOG00000010544) #19 TIMM29 (ENSPLOG00000010493) YIPF2 (ENSPLOG00000004338) CARM1 (ENSPLOG00000004311) C19orf38 (ENSPLOG00000004284) TMED1 (ENSPLOG00000004267) DNM2 (ENSPLOG00000004141) QTRT1 (ENSPLOG00000004032) ENSPLOG00000004021 ILF3 (ENSPLOG00000003999) ENSPLOG00000003962 SLC44A2 (ENSPLOG00000003904) AP1M2 (ENSPLOG00000003836) #21 CDKN2D (ENSPLOG00000003822) #22 KRI1 (ENSPLOG00000003783) ATG4D (ENSPLOG00000003751) S1PR5 (ENSPLOG00000003732) #25 KEAP1 (ENSPLOG00000003715) #24 PDE4A (ENSPLOG00000003631) CDC37 (ENSPLOG00000003550) TYK2 (ENSPLOG00000003514) ICAM3 (ENSPLOG00000003485) RAVER1 (ENSPLOG00000003453) FDX2 (ENSPLOG00000003426) #26 ENSPLOG00000003406 #27 ICAM5 (ENSPLOG00000003385) ICAM4 (ENSPLOG00000003370) ICAM1 (ENSPLOG00000003347) MRPL4 (ENSPLOG00000003305) leopard MODERN SPECIES 110 SPC24 (ENSPPRG00000005108) LDLR (ENSPPRG00000004721) SMARCA4 (ENSPPRG00000000064) #19 TIMM29 (ENSPPRG00000009470) YIPF2 (ENSPPRG00000009314) CARM1 (ENSPPRG00000007534) C19orf38 (ENSPPRG00000006099) TMED1 (ENSPPRG00000005601) DNM2 (ENSPPRG00000005225) ENSPPRG00000000095 QTRT1 (ENSPPRG00000022719) ILF3 (ENSPPRG00000021486) SLC44A2 (ENSPPRG00000006187) ENSPPRG00000002741 AP1M2 (ENSPPRG00000002436) #21 CDKN2D (ENSPPRG00000001424) #22 KRI1 (ENSPPRG00000001072) ATG4D (ENSPPRG00000000081) ENSPPRG00000022644 #25 KEAP1 (ENSPPRG00000023110) #24 PDE4A (ENSPPRG00000023496) ENSPPRG00000017450 CDC37 (ENSPPRG00000013068) TYK2 (ENSPPRG00000012402) ICAM3 (ENSPPRG00000011491) RAVER1 (ENSPPRG00000009912) FDX2 (ENSPPRG00000007655) #26 ZGLP1 (ENSPPRG00000007383) #27 ICAM5 (ENSPPRG00000006799) ICAM4 (ENSPPRG00000005803) ICAM1 (ENSPPRG00000005262) Tiger MODERN SPECIES 128 ANGPTL8 (ENSPTIG00000016558) KANK2 (ENSPTIG00000016602) SPC24 (ENSPTIG00000016884) LDLR (ENSPTIG00000016898) SMARCA4 (ENSPTIG00000017447) #19 ENSPTIG00000020521 CARM1 (ENSPTIG00000020631) C19orf38 (ENSPTIG00000020952) TMED1 (ENSPTIG00000021021) DNM2 (ENSPTIG00000021156) QTRT1 (ENSPTIG00000021522) ILF3 (ENSPTIG00000021627) SLC44A2 (ENSPTIG00000005289) ENSPTIG00000006175 AP1M2 (ENSPTIG00000006441) #21 CDKN2D (ENSPTIG00000006644) #22 KRI1 (ENSPTIG00000006812) ENSPTIG00000007850 KEAP1 (ENSPTIG00000008038) #24 PDE4A (ENSPTIG00000008199) ENSPTIG00000008493 TYK2 (ENSPTIG00000008529) ICAM3 (ENSPTIG00000009385) RAVER1 (ENSPTIG00000009744) ENSPTIG00000009688 #26 ENSPTIG00000010293 #27 ICAM5 (ENSPTIG00000010422) ICAM4 (ENSPTIG00000010549) ENSPTIG00000010791 MRPL4 (ENSPTIG00000010912) Caniformia ANCESTRAL SPECIES 4 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Canidae ANCESTRAL SPECIES ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Dingo MODERN SPECIES 112 DOCK6 (ENSCAFG00020000362) KANK2 (ENSCAFG00020025421) SPC24 (ENSCAFG00020025419) LDLR (ENSCAFG00020025417) SMARCA4 (ENSCAFG00020024620) #19 TIMM29 (ENSCAFG00020024523) YIPF2 (ENSCAFG00020024521) ENSCAFG00020024515 C19orf38 (ENSCAFG00020024508) TMED1 (ENSCAFG00020024503) DNM2 (ENSCAFG00020024497) QTRT1 (ENSCAFG00020024495) ILF3 (ENSCAFG00020024492) SLC44A2 (ENSCAFG00020024490) AP1M2 (ENSCAFG00020024487) #21 CDKN2D (ENSCAFG00020024485) #22 KRI1 (ENSCAFG00020024483) ATG4D (ENSCAFG00020024480) ENSCAFG00020024479 #25 KEAP1 (ENSCAFG00020024476) #24 PDE4A (ENSCAFG00020024472) CDC37 (ENSCAFG00020024470) TYK2 (ENSCAFG00020024459) ICAM3 (ENSCAFG00020024455) RAVER1 (ENSCAFG00020024449) FDX2 (ENSCAFG00020024447) #26 ZGLP1 (ENSCAFG00020024441) #27 ICAM5 (ENSCAFG00020024426) ICAM4 (ENSCAFG00020024419) ICAM1 (ENSCAFG00020024415) MRPL4 (ENSCAFG00020024405) Dog MODERN SPECIES 12 DOCK6 (ENSCAFG00845020181) ANGPTL8 (ENSCAFG00845021478) KANK2 (ENSCAFG00845021538) SPC24 (ENSCAFG00845021694) LDLR (ENSCAFG00845021826) SMARCA4 (ENSCAFG00845022085) #19 YIPF2 (ENSCAFG00845022472) TIMM29 (ENSCAFG00845022723) ENSCAFG00845022768 C20H19orf38 (ENSCAFG00845022938) TMED1 (ENSCAFG00845023014) DNM2 (ENSCAFG00845023306) ILF3 (ENSCAFG00845024192) SLC44A2 (ENSCAFG00845024850) AP1M2 (ENSCAFG00845026105) #21 CDKN2D (ENSCAFG00845026179) #22 KRI1 (ENSCAFG00845026221) ATG4D (ENSCAFG00845026379) KEAP1 (ENSCAFG00845026598) #24 S1PR5 (ENSCAFG00845026691) #25 PDE4A (ENSCAFG00845026907) CDC37 (ENSCAFG00845027375) TYK2 (ENSCAFG00845027438) ICAM3 (ENSCAFG00845027621) RAVER1 (ENSCAFG00845027658) FDX2 (ENSCAFG00845027784) #26 ENSCAFG00845027817 #27 ICAM5 (ENSCAFG00845027874) ICAM4 (ENSCAFG00845027954) ICAM1 (ENSCAFG00845027986) MRPL4 (ENSCAFG00845028082) Red fox MODERN SPECIES 182 ANGPTL8 (ENSVVUG00000023570) DOCK6 (ENSVVUG00000018210) KANK2 (ENSVVUG00000017865) SPC24 (ENSVVUG00000017858) LDLR (ENSVVUG00000017844) SMARCA4 (ENSVVUG00000017820) #19 TIMM29 (ENSVVUG00000017817) YIPF2 (ENSVVUG00000017813) CARM1 (ENSVVUG00000017717) TMED1 (ENSVVUG00000017707) DNM2 (ENSVVUG00000017697) QTRT1 (ENSVVUG00000017540) ILF3 (ENSVVUG00000017504) SLC44A2 (ENSVVUG00000017455) ENSVVUG00000017448 #21 CDKN2D (ENSVVUG00000017432) #22 KRI1 (ENSVVUG00000017413) ATG4D (ENSVVUG00000017356) ENSVVUG00000017346 #25 KEAP1 (ENSVVUG00000017341) #24 PDE4A (ENSVVUG00000017287) CDC37 (ENSVVUG00000017252) Caniformia_b ANCESTRAL SPECIES 23 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Mustelinae ANCESTRAL SPECIES 45 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 American mink MODERN SPECIES 233 DOCK6 (ENSNVIG00000002471) KANK2 (ENSNVIG00000002407) SPC24 (ENSNVIG00000002387) LDLR (ENSNVIG00000002095) SMARCA4 (ENSNVIG00000000964) #19 TIMM29 (ENSNVIG00000000951) YIPF2 (ENSNVIG00000000916) CARM1 (ENSNVIG00000000875) C19orf38 (ENSNVIG00000000851) TMED1 (ENSNVIG00000000836) DNM2 (ENSNVIG00000000504) ILF3 (ENSNVIG00000000028) ENSNVIG00000024114 SLC44A2 (ENSNVIG00000024109) AP1M2 (ENSNVIG00000024101) #21 CDKN2D (ENSNVIG00000024098) #22 KRI1 (ENSNVIG00000024085) ATG4D (ENSNVIG00000024084) S1PR5 (ENSNVIG00000024083) #25 KEAP1 (ENSNVIG00000024081) #24 PDE4A (ENSNVIG00000024079) CDC37 (ENSNVIG00000024077) TYK2 (ENSNVIG00000023790) ICAM3 (ENSNVIG00000023787) RAVER1 (ENSNVIG00000023781) ENSNVIG00000023780 #26 ENSNVIG00000023779 #27 ICAM5 (ENSNVIG00000023776) ICAM4 (ENSNVIG00000023772) ICAM1 (ENSNVIG00000023769) MRPL4 (ENSNVIG00000023765) Ferret MODERN SPECIES 185 ANGPTL8 (ENSMPUG00000005668) KANK2 (ENSMPUG00000005686) SPC24 (ENSMPUG00000005692) LDLR (ENSMPUG00000005700) SMARCA4 (ENSMPUG00000005711) #19 TIMM29 (ENSMPUG00000005726) YIPF2 (ENSMPUG00000005740) CARM1 (ENSMPUG00000005752) C19orf38 (ENSMPUG00000005817) TMED1 (ENSMPUG00000005821) ENSMPUG00000005856 QTRT1 (ENSMPUG00000006190) ILF3 (ENSMPUG00000006205) SLC44A2 (ENSMPUG00000006218) AP1M2 (ENSMPUG00000006512) #21 CDKN2D (ENSMPUG00000006525) #22 KRI1 (ENSMPUG00000006534) ATG4D (ENSMPUG00000006554) S1PR5 (ENSMPUG00000006658) #25 KEAP1 (ENSMPUG00000006665) #24 PDE4A (ENSMPUG00000006672) CDC37 (ENSMPUG00000006683) TYK2 (ENSMPUG00000006692) RAVER1 (ENSMPUG00000006712) FDX2 (ENSMPUG00000006723) #26 ENSMPUG00000006747 ICAM5 (ENSMPUG00000006752) ICAM4 (ENSMPUG00000006813) ICAM1 (ENSMPUG00000006820) MRPL4 (ENSMPUG00000006825) S1PR2 (ENSMPUG00000018709) ##25 Ursidae ANCESTRAL SPECIES 20 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Giant Panda MODERN SPECIES 14 DOCK6 (ENSAMEG00000010680) KANK2 (ENSAMEG00000010806) SPC24 (ENSAMEG00000010824) LDLR (ENSAMEG00000010827) SMARCA4 (ENSAMEG00000010868) #19 TIMM29 (ENSAMEG00000010998) YIPF2 (ENSAMEG00000011001) CARM1 (ENSAMEG00000011015) C19orf38 (ENSAMEG00000011044) TMED1 (ENSAMEG00000011047) DNM2 (ENSAMEG00000011055) QTRT1 (ENSAMEG00000011134) ILF3 (ENSAMEG00000011152) SLC44A2 (ENSAMEG00000011218) AP1M2 (ENSAMEG00000011318) #21 CDKN2D (ENSAMEG00000011370) #22 KRI1 (ENSAMEG00000011373) ATG4D (ENSAMEG00000011409) S1PR5 (ENSAMEG00000030671) #25 KEAP1 (ENSAMEG00000011445) #24 PDE4A (ENSAMEG00000011455) CDC37 (ENSAMEG00000011542) TYK2 (ENSAMEG00000011557) ICAM3 (ENSAMEG00000011709) RAVER1 (ENSAMEG00000011738) FDX2 (ENSAMEG00000011765) #26 ZGLP1 (ENSAMEG00000011774) #27 ENSAMEG00000026236 ICAM5 (ENSAMEG00000011775) ICAM4 (ENSAMEG00000011803) ICAM1 (ENSAMEG00000011805) Ursus ANCESTRAL SPECIES 93 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 American black bear MODERN SPECIES 486 ILF3 (ENSUAMG00000017664) ENSUAMG00000018404 SLC44A2 (ENSUAMG00000018423) AP1M2 (ENSUAMG00000018610) #21 CDKN2D (ENSUAMG00000018611) #22 KRI1 (ENSUAMG00000018612) ATG4D (ENSUAMG00000018615) S1PR5 (ENSUAMG00000018618) #25 KEAP1 (ENSUAMG00000018620) #24 PDE4A (ENSUAMG00000018637) CDC37 (ENSUAMG00000018652) TYK2 (ENSUAMG00000018663) ICAM3 (ENSUAMG00000020384) RAVER1 (ENSUAMG00000020385) FDX2 (ENSUAMG00000020386) #26 ZGLP1 (ENSUAMG00000020388) #27 ICAM5 (ENSUAMG00000020389) ICAM4 (ENSUAMG00000020390) ENSUAMG00000020391 MRPL4 (ENSUAMG00000020392) Polar bear MODERN SPECIES 312 DOCK6 (ENSUMAG00000019870) ANGPTL8 (ENSUMAG00000021401) KANK2 (ENSUMAG00000021403) SPC24 (ENSUMAG00000021404) LDLR (ENSUMAG00000021406) SMARCA4 (ENSUMAG00000022005) #19 YIPF2 (ENSUMAG00000024977) CARM1 (ENSUMAG00000024981) C19orf38 (ENSUMAG00000024984) TMED1 (ENSUMAG00000024986) DNM2 (ENSUMAG00000025035) QTRT1 (ENSUMAG00000025046) ILF3 (ENSUMAG00000025049) SLC44A2 (ENSUMAG00000025056) AP1M2 (ENSUMAG00000025087) #21 CDKN2D (ENSUMAG00000025088) #22 KRI1 (ENSUMAG00000025089) ATG4D (ENSUMAG00000025090) KEAP1 (ENSUMAG00000025092) #24 PDE4A (ENSUMAG00000025093) CDC37 (ENSUMAG00000025094) TYK2 (ENSUMAG00000025095) ICAM3 (ENSUMAG00000025097) RAVER1 (ENSUMAG00000025098) FDX2 (ENSUMAG00000025100) #26 ZGLP1 (ENSUMAG00000025101) #27 ICAM5 (ENSUMAG00000025102) ENSUMAG00000025103 ENSUMAG00000025104 MRPL4 (ENSUMAG00000025105) ENSUMAG00000025106 ##25 Laurasiatheria_c ANCESTRAL SPECIES 16 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Equus ANCESTRAL SPECIES 53 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00390000016292.i.a.h ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Donkey MODERN SPECIES 12 KANK2 (ENSEASG00005005955) SPC24 (ENSEASG00005034900) LDLR (ENSEASG00005005990) SMARCA4 (ENSEASG00005006167) #19 TIMM29 (ENSEASG00005007528) YIPF2 (ENSEASG00005007530) CARM1 (ENSEASG00005007536) ENSEASG00005030995 TMED1 (ENSEASG00005031420) DNM2 (ENSEASG00005007575) QTRT1 (ENSEASG00005008453) ILF3 (ENSEASG00005008476) ENSEASG00005010451 SLC44A2 (ENSEASG00005008771) AP1M2 (ENSEASG00005010464) #21 CDKN2D (ENSEASG00005026481) #22 KRI1 (ENSEASG00005010499) ATG4D (ENSEASG00005038617) S1PR5 (ENSEASG00005027849) #25 KEAP1 (ENSEASG00005010513) #24 PDE4A (ENSEASG00005010517) CDC37 (ENSEASG00005036500) ENSEASG00005034109 TYK2 (ENSEASG00005010539) ICAM3 (ENSEASG00005010542) RAVER1 (ENSEASG00005010544) FDX2 (ENSEASG00005010545) #26 ENSEASG00005030776 #27 ICAM5 (ENSEASG00005010548) ICAM4 (ENSEASG00005024479) ENSEASG00005010553 Horse MODERN SPECIES 28 KANK2 (ENSECAG00000016820) SPC24 (ENSECAG00000017469) LDLR (ENSECAG00000019557) SMARCA4 (ENSECAG00000008334) #19 ENSECAG00000046578 YIPF2 (ENSECAG00000012720) CARM1 (ENSECAG00000013563) C7H19orf38 (ENSECAG00000019977) TMED1 (ENSECAG00000021522) DNM2 (ENSECAG00000022341) QTRT1 (ENSECAG00000014773) ILF3 (ENSECAG00000017640) SLC44A2 (ENSECAG00000010363) ENSECAG00000039388 ATG4D (ENSECAG00000015306) CDKN2D (ENSECAG00000034985) #22 KRI1 (ENSECAG00000011767) S1PR5 (ENSECAG00000031779) #25 KEAP1 (ENSECAG00000020533) #24 PDE4A (ENSECAG00000023182) CDC37 (ENSECAG00000012896) ENSECAG00000004638 TYK2 (ENSECAG00000020260) RAVER1 (ENSECAG00000024966) FDX2 (ENSECAG00000008220) #26 ZGLP1 (ENSECAG00000028652) #27 ICAM5 (ENSECAG00000009299) ICAM4 (ENSECAG00000012805) S1PR2 (ENSECAG00000004727) ##25 ICAM1 (ENSECAG00000013883) MRPL4 (ENSECAG00000017013) Chiroptera ANCESTRAL SPECIES 59 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Microchiroptera ANCESTRAL SPECIES 53 ENSGT00510000049338 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Greater horseshoe bat MODERN SPECIES 9 KANK2 (ENSRFEG00010012621) SPC24 (ENSRFEG00010012760) LDLR (ENSRFEG00010012831) SMARCA4 (ENSRFEG00010013040) #19 ENSRFEG00010013191 TIMM29 (ENSRFEG00010013206) YIPF2 (ENSRFEG00010013241) CARM1 (ENSRFEG00010013355) C19orf38 (ENSRFEG00010013441) TMED1 (ENSRFEG00010013495) DNM2 (ENSRFEG00010013597) QTRT1 (ENSRFEG00010013865) ILF3 (ENSRFEG00010013937) SLC44A2 (ENSRFEG00010014184) AP1M2 (ENSRFEG00010014366) #21 CDKN2D (ENSRFEG00010014449) #22 KRI1 (ENSRFEG00010014507) ATG4D (ENSRFEG00010014575) S1PR5 (ENSRFEG00010014610) #25 KEAP1 (ENSRFEG00010014642) #24 ENSRFEG00010014682 PDE4A (ENSRFEG00010014770) CDC37 (ENSRFEG00010015698) TYK2 (ENSRFEG00010015752) ICAM3 (ENSRFEG00010015850) RAVER1 (ENSRFEG00010015894) FDX2 (ENSRFEG00010016631) #26 ENSRFEG00010016728 #27 ICAM5 (ENSRFEG00010016803) ICAM4 (ENSRFEG00010016957) ICAM1 (ENSRFEG00010017025) Eulipotyphla ANCESTRAL SPECIES 182 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 Hedgehog MODERN SPECIES 16908 CDKN2D (ENSEEUG00000007979) #22 Common shrew MODERN SPECIES 6087 AP1M2 (ENSSARG00000002242) #21 CDKN2D (ENSSARG00000002233) #22 KRI1 (ENSSARG00000002182) ATG4D (ENSSARG00000002174) KEAP1 (ENSSARG00000002161) #24 Euarchontoglires ANCESTRAL SPECIES 18 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Primates ANCESTRAL SPECIES 18 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Strepsirrhini ANCESTRAL SPECIES 28 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Lemuriformes ANCESTRAL SPECIES 35 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mouse lemur MODERN SPECIES 16 ANGPTL8 (ENSMICG00000042533) KANK2 (ENSMICG00000004036) SPC24 (ENSMICG00000045263) LDLR (ENSMICG00000000548) SMARCA4 (ENSMICG00000009806) #19 TIMM29 (ENSMICG00000043935) YIPF2 (ENSMICG00000011429) CARM1 (ENSMICG00000009787) C19orf38 (ENSMICG00000044532) TMED1 (ENSMICG00000029080) DNM2 (ENSMICG00000009737) QTRT1 (ENSMICG00000029300) ILF3 (ENSMICG00000009694) SLC44A2 (ENSMICG00000009648) AP1M2 (ENSMICG00000009639) #21 CDKN2D (ENSMICG00000032531) #22 KRI1 (ENSMICG00000009591) ATG4D (ENSMICG00000009575) KEAP1 (ENSMICG00000009563) #24 PDE4A (ENSMICG00000026345) CDC37 (ENSMICG00000010376) TYK2 (ENSMICG00000010345) ICAM3 (ENSMICG00000010335) RAVER1 (ENSMICG00000010326) FDX2 (ENSMICG00000029070) #26 ZGLP1 (ENSMICG00000036834) #27 ICAM5 (ENSMICG00000010301) ICAM4 (ENSMICG00000010290) ICAM1 (ENSMICG00000047282) MRPL4 (ENSMICG00000010267) S1PR2 (ENSMICG00000029506) ##25 Lemuriformes_a ANCESTRAL SPECIES 25 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Coquerels sifaka MODERN SPECIES 226 DOCK6 (ENSPCOG00000015011) KANK2 (ENSPCOG00000012559) SPC24 (ENSPCOG00000023772) LDLR (ENSPCOG00000027747) SMARCA4 (ENSPCOG00000023011) #19 TIMM29 (ENSPCOG00000016566) YIPF2 (ENSPCOG00000007218) CARM1 (ENSPCOG00000018916) C19orf38 (ENSPCOG00000027100) TMED1 (ENSPCOG00000011779) DNM2 (ENSPCOG00000025201) QTRT1 (ENSPCOG00000017773) ILF3 (ENSPCOG00000019611) SLC44A2 (ENSPCOG00000017229) AP1M2 (ENSPCOG00000025286) #21 CDKN2D (ENSPCOG00000018426) #22 KRI1 (ENSPCOG00000004012) ATG4D (ENSPCOG00000018567) KEAP1 (ENSPCOG00000026076) #24 PDE4A (ENSPCOG00000024879) CDC37 (ENSPCOG00000015827) TYK2 (ENSPCOG00000007085) ICAM3 (ENSPCOG00000015812) RAVER1 (ENSPCOG00000026605) FDX2 (ENSPCOG00000019514) #26 ZGLP1 (ENSPCOG00000016482) #27 ICAM5 (ENSPCOG00000028361) ICAM4 (ENSPCOG00000024827) ICAM1 (ENSPCOG00000020759) MRPL4 (ENSPCOG00000016733) DNMT1 (ENSPCOG00000018383) Greater bamboo lemur MODERN SPECIES 1592 AP1M2 (ENSPSMG00000018790) #21 CDKN2D (ENSPSMG00000018726) #22 KRI1 (ENSPSMG00000018724) ATG4D (ENSPSMG00000018715) KEAP1 (ENSPSMG00000018702) #24 PDE4A (ENSPSMG00000018693) CDC37 (ENSPSMG00000018638) TYK2 (ENSPSMG00000018540) ICAM3 (ENSPSMG00000018423) RAVER1 (ENSPSMG00000018368) FDX2 (ENSPSMG00000018302) #26 ENSPSMG00000018299 #27 ICAM5 (ENSPSMG00000018287) ICAM4 (ENSPSMG00000018274) ENSPSMG00000018266 ENSPSMG00000018263 Bushbaby MODERN SPECIES 242 DOCK6 (ENSOGAG00000006731) KANK2 (ENSOGAG00000030724) SPC24 (ENSOGAG00000029829) LDLR (ENSOGAG00000016055) SMARCA4 (ENSOGAG00000016148) #19 TIMM29 (ENSOGAG00000016147) YIPF2 (ENSOGAG00000016837) CARM1 (ENSOGAG00000016835) C19orf38 (ENSOGAG00000025609) TMED1 (ENSOGAG00000011037) DNM2 (ENSOGAG00000011030) QTRT1 (ENSOGAG00000029328) ENSOGAG00000015244 SLC44A2 (ENSOGAG00000029872) AP1M2 (ENSOGAG00000014423) #21 CDKN2D (ENSOGAG00000030833) #22 KRI1 (ENSOGAG00000027909) ATG4D (ENSOGAG00000012591) ENSOGAG00000027497 #25 KEAP1 (ENSOGAG00000012589) #24 PDE4A (ENSOGAG00000012581) CDC37 (ENSOGAG00000011088) TYK2 (ENSOGAG00000011083) ICAM3 (ENSOGAG00000011078) RAVER1 (ENSOGAG00000011071) FDX2 (ENSOGAG00000011070) #26 ZGLP1 (ENSOGAG00000025914) #27 ICAM5 (ENSOGAG00000011064) ICAM4 (ENSOGAG00000011058) ICAM1 (ENSOGAG00000011055) MRPL4 (ENSOGAG00000011051) Haplorrhini ANCESTRAL SPECIES 14 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Simiiformes ANCESTRAL SPECIES 13 ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147865 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Catarrhini ANCESTRAL SPECIES ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Vervet Monkey MODERN SPECIES 25 RAB3D (ENSCSAG00000006824) TSPAN16 (ENSCSAG00000006831) ANGPTL8 (ENSCSAG00000006833) ENSCSAG00000006845 KANK2 (ENSCSAG00000006850) LDLR (ENSCSAG00000006885) ENSCSAG00000006894 #19 TIMM29 (ENSCSAG00000006898) YIPF2 (ENSCSAG00000006910) CARM1 (ENSCSAG00000006939) TMED1 (ENSCSAG00000006950) DNM2 (ENSCSAG00000006956) QTRT1 (ENSCSAG00000006976) ILF3 (ENSCSAG00000006983) SLC44A2 (ENSCSAG00000007045) CDKN2D (ENSCSAG00000007080) #22 AP1M2 (ENSCSAG00000007087) #21 KRI1 (ENSCSAG00000007096) ATG4D (ENSCSAG00000007103) S1PR5 (ENSCSAG00000018836) #25 KEAP1 (ENSCSAG00000007107) #24 PDE4A (ENSCSAG00000007204) ENSCSAG00000007234 TYK2 (ENSCSAG00000007285) RAVER1 (ENSCSAG00000007317) FDX2 (ENSCSAG00000007325) #26 ZGLP1 (ENSCSAG00000007336) #27 ICAM5 (ENSCSAG00000007342) ICAM4 (ENSCSAG00000007349) ICAM1 (ENSCSAG00000007356) MRPL4 (ENSCSAG00000007362) Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00910000147865 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 Macaca ANCESTRAL SPECIES 21 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00940000159005 ENSGT00910000147270 ENSGT00910000147865 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147865 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Rhesus MODERN SPECIES 10 SPC24 (ENSMMUG00000003612) LDLR (ENSMMUG00000003611) SMARCA4 (ENSMMUG00000012042) #19 TIMM29 (ENSMMUG00000053764) YIPF2 (ENSMMUG00000004400) CARM1 (ENSMMUG00000004401) C19H19orf38 (ENSMMUG00000018981) TMED1 (ENSMMUG00000055775) DNM2 (ENSMMUG00000014677) QTRT1 (ENSMMUG00000028882) ENSMMUG00000053725 ILF3 (ENSMMUG00000014673) ENSMMUG00000060522 SLC44A2 (ENSMMUG00000003744) AP1M2 (ENSMMUG00000016593) #21 CDKN2D (ENSMMUG00000011953) #22 KRI1 (ENSMMUG00000011951) ATG4D (ENSMMUG00000046883) S1PR5 (ENSMMUG00000008686) #25 KEAP1 (ENSMMUG00000005218) #24 ENSMMUG00000059305 PDE4A (ENSMMUG00000016122) CDC37 (ENSMMUG00000003111) TYK2 (ENSMMUG00000003110) RAVER1 (ENSMMUG00000014897) FDX2 (ENSMMUG00000059073) #26 ZGLP1 (ENSMMUG00000050415) #27 ICAM5 (ENSMMUG00000040746) ICAM4 (ENSMMUG00000009343) ICAM1 (ENSMMUG00000014896) MRPL4 (ENSMMUG00000001219) Crab-eating macaque MODERN SPECIES 10 TSPAN16 (ENSMFAG00000046046) ENSMFAG00000024613 ENSMFAG00000041570 ENSMFAG00000030716 LDLR (ENSMFAG00000042102) TIMM29 (ENSMFAG00000032190) YIPF2 (ENSMFAG00000039576) CARM1 (ENSMFAG00000036898) C19orf38 (ENSMFAG00000003956) TMED1 (ENSMFAG00000045362) DNM2 (ENSMFAG00000045986) QTRT1 (ENSMFAG00000044529) ILF3 (ENSMFAG00000039557) SLC44A2 (ENSMFAG00000035994) AP1M2 (ENSMFAG00000002157) #21 CDKN2D (ENSMFAG00000032475) #22 KRI1 (ENSMFAG00000046360) ATG4D (ENSMFAG00000036604) ENSMFAG00000044391 KEAP1 (ENSMFAG00000054809) #24 PDE4A (ENSMFAG00000004722) ENSMFAG00000037601 TYK2 (ENSMFAG00000044770) ENSMFAG00000062072 RAVER1 (ENSMFAG00000037977) FDX2 (ENSMFAG00000043889) #26 ZGLP1 (ENSMFAG00000059142) #27 ICAM5 (ENSMFAG00000002910) ICAM4 (ENSMFAG00000003379) ICAM1 (ENSMFAG00000026825) ENSMFAG00000059527 Pig-tailed macaque MODERN SPECIES 76 KANK2 (ENSMNEG00000030836) SPC24 (ENSMNEG00000032089) LDLR (ENSMNEG00000000050) SMARCA4 (ENSMNEG00000028512) #19 TIMM29 (ENSMNEG00000044764) YIPF2 (ENSMNEG00000037912) CARM1 (ENSMNEG00000031496) C19orf38 (ENSMNEG00000043713) TMED1 (ENSMNEG00000037169) DNM2 (ENSMNEG00000029030) QTRT1 (ENSMNEG00000031690) ILF3 (ENSMNEG00000042707) SLC44A2 (ENSMNEG00000044855) ENSMNEG00000044028 AP1M2 (ENSMNEG00000042247) #21 CDKN2D (ENSMNEG00000033406) #22 KRI1 (ENSMNEG00000043431) ATG4D (ENSMNEG00000043930) KEAP1 (ENSMNEG00000041263) #24 PDE4A (ENSMNEG00000040163) ENSMNEG00000036974 TYK2 (ENSMNEG00000038855) ICAM3 (ENSMNEG00000044562) ENSMNEG00000036746 ENSMNEG00000028055 RAVER1 (ENSMNEG00000028390) FDX2 (ENSMNEG00000031990) #26 ZGLP1 (ENSMNEG00000029422) #27 ICAM5 (ENSMNEG00000044080) ICAM4 (ENSMNEG00000043426) ICAM1 (ENSMNEG00000033129) Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00910000147865 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 Olive baboon MODERN SPECIES 12 DOCK6 (ENSPANG00000001232) ANGPTL8 (ENSPANG00000001233) KANK2 (ENSPANG00000014400) SPC24 (ENSPANG00000005947) LDLR (ENSPANG00000018406) SMARCA4 (ENSPANG00000011042) #19 TIMM29 (ENSPANG00000005370) YIPF2 (ENSPANG00000003969) CARM1 (ENSPANG00000021071) C19orf38 (ENSPANG00000007431) TMED1 (ENSPANG00000020664) DNM2 (ENSPANG00000003166) QTRT1 (ENSPANG00000014330) ILF3 (ENSPANG00000014995) SLC44A2 (ENSPANG00000004916) CDKN2D (ENSPANG00000022407) #22 KRI1 (ENSPANG00000022951) ATG4D (ENSPANG00000006123) S1PR5 (ENSPANG00000047566) #25 KEAP1 (ENSPANG00000003566) #24 PDE4A (ENSPANG00000007730) ENSPANG00000011043 TYK2 (ENSPANG00000019963) ICAM3 (ENSPANG00000011402) FDX2 (ENSPANG00000035899) #26 ZGLP1 (ENSPANG00000005034) #27 ICAM5 (ENSPANG00000017123) ICAM4 (ENSPANG00000011444) ICAM1 (ENSPANG00000009752) MRPL4 (ENSPANG00000001265) S1PR2 (ENSPANG00000010514) ##25 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147270 ENSGT00910000147865 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Sooty mangabey MODERN SPECIES 347 KANK2 (ENSCATG00000043295) ENSCATG00000038154 LDLR (ENSCATG00000042525) SMARCA4 (ENSCATG00000029530) #19 TIMM29 (ENSCATG00000041046) YIPF2 (ENSCATG00000043294) CARM1 (ENSCATG00000034760) C19orf38 (ENSCATG00000034346) TMED1 (ENSCATG00000036095) DNM2 (ENSCATG00000038733) QTRT1 (ENSCATG00000034798) ILF3 (ENSCATG00000023258) ENSCATG00000030523 SLC44A2 (ENSCATG00000043520) AP1M2 (ENSCATG00000023909) #21 CDKN2D (ENSCATG00000029941) #22 KRI1 (ENSCATG00000035384) ATG4D (ENSCATG00000043691) KEAP1 (ENSCATG00000030706) #24 PDE4A (ENSCATG00000044053) ENSCATG00000032331 TYK2 (ENSCATG00000003840) ENSCATG00000041337 ENSCATG00000021386 ICAM3 (ENSCATG00000041750) RAVER1 (ENSCATG00000043863) FDX2 (ENSCATG00000044778) #26 ZGLP1 (ENSCATG00000031603) #27 ICAM5 (ENSCATG00000043572) ICAM4 (ENSCATG00000040339) ICAM1 (ENSCATG00000036475) Rhinopithecus ANCESTRAL SPECIES ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00940000159005 ENSGT00910000147865 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Black snub-nosed monkey MODERN SPECIES 933 QTRT1 (ENSRBIG00000036634) ILF3 (ENSRBIG00000038846) SLC44A2 (ENSRBIG00000036855) ENSRBIG00000035098 ENSRBIG00000022218 AP1M2 (ENSRBIG00000034189) #21 CDKN2D (ENSRBIG00000019193) #22 KRI1 (ENSRBIG00000002472) ATG4D (ENSRBIG00000036641) KEAP1 (ENSRBIG00000033212) #24 Golden snub-nosed monkey MODERN SPECIES 1762 SPC24 (ENSRROG00000044771) LDLR (ENSRROG00000028513) SMARCA4 (ENSRROG00000045509) #19 TIMM29 (ENSRROG00000042684) YIPF2 (ENSRROG00000028326) CARM1 (ENSRROG00000033867) C19orf38 (ENSRROG00000031319) TMED1 (ENSRROG00000026580) DNM2 (ENSRROG00000041162) QTRT1 (ENSRROG00000036578) ILF3 (ENSRROG00000031702) SLC44A2 (ENSRROG00000012407) ENSRROG00000032176 ENSRROG00000004844 AP1M2 (ENSRROG00000036852) #21 CDKN2D (ENSRROG00000034268) #22 KRI1 (ENSRROG00000041397) ATG4D (ENSRROG00000041650) KEAP1 (ENSRROG00000041020) #24 PDE4A (ENSRROG00000029729) ENSRROG00000030450 TYK2 (ENSRROG00000030801) ICAM3 (ENSRROG00000042281) ENSRROG00000023550 RAVER1 (ENSRROG00000031186) FDX2 (ENSRROG00000043177) #26 ZGLP1 (ENSRROG00000030601) #27 ICAM5 (ENSRROG00000040866) ICAM4 (ENSRROG00000029024) ICAM1 (ENSRROG00000032596) MRPL4 (ENSRROG00000003982) Hominoidea ANCESTRAL SPECIES ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.a.a ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Hominidae ANCESTRAL SPECIES ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.a.a ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.a.a ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Homo/Pan group ANCESTRAL SPECIES ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.a.a ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Pan ANCESTRAL SPECIES 14 ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.a.a ENSGT00940000159869 ENSGT00910000147270 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Chimpanzee MODERN SPECIES 10 KANK2 (ENSPTRG00000010492) SPC24 (ENSPTRG00000010491) LDLR (ENSPTRG00000010490) SMARCA4 (ENSPTRG00000010488) #19 TIMM29 (ENSPTRG00000010487) YIPF2 (ENSPTRG00000010486) CARM1 (ENSPTRG00000010485) C19H19orf38 (ENSPTRG00000033817) TMED1 (ENSPTRG00000010484) DNM2 (ENSPTRG00000034439) QTRT1 (ENSPTRG00000010481) ILF3 (ENSPTRG00000010480) ENSPTRG00000047038 SLC44A2 (ENSPTRG00000010479) AP1M2 (ENSPTRG00000010478) #21 CDKN2D (ENSPTRG00000010477) #22 KRI1 (ENSPTRG00000010476) ATG4D (ENSPTRG00000010475) KEAP1 (ENSPTRG00000010473) #24 PDE4A (ENSPTRG00000010470) CDC37 (ENSPTRG00000010469) TYK2 (ENSPTRG00000010468) ENSPTRG00000043915 ICAM3 (ENSPTRG00000010467) RAVER1 (ENSPTRG00000010466) FDX2 (ENSPTRG00000010465) #26 ZGLP1 (ENSPTRG00000034377) #27 ICAM5 (ENSPTRG00000010464) ICAM4 (ENSPTRG00000022810) ICAM1 (ENSPTRG00000010463) MRPL4 (ENSPTRG00000010462) Bonobo MODERN SPECIES 10 ENSPPAG00000041283 KANK2 (ENSPPAG00000039064) ENSPPAG00000013770 LDLR (ENSPPAG00000027195) SMARCA4 (ENSPPAG00000043191) #19 YIPF2 (ENSPPAG00000037888) CARM1 (ENSPPAG00000030586) C19orf38 (ENSPPAG00000042367) TMED1 (ENSPPAG00000031704) DNM2 (ENSPPAG00000004096) QTRT1 (ENSPPAG00000030556) ILF3 (ENSPPAG00000040547) ENSPPAG00000042775 SLC44A2 (ENSPPAG00000039593) AP1M2 (ENSPPAG00000042634) #21 ENSPPAG00000038326 #22 KRI1 (ENSPPAG00000040241) ATG4D (ENSPPAG00000031810) S1PR5 (ENSPPAG00000036033) #25 KEAP1 (ENSPPAG00000038958) #24 PDE4A (ENSPPAG00000043851) CDC37 (ENSPPAG00000041597) TYK2 (ENSPPAG00000039135) ENSPPAG00000020234 ICAM3 (ENSPPAG00000042660) RAVER1 (ENSPPAG00000002611) FDX2 (ENSPPAG00000012689) #26 ZGLP1 (ENSPPAG00000028628) #27 ICAM5 (ENSPPAG00000030844) ICAM4 (ENSPPAG00000035190) ICAM1 (ENSPPAG00000034232) Human MODERN SPECIES 10 DOCK6 (ENSG00000130158) KANK2 (ENSG00000197256) SPC24 (ENSG00000161888) LDLR (ENSG00000130164) SMARCA4 (ENSG00000127616) #19 TIMM29 (ENSG00000142444) YIPF2 (ENSG00000130733) CARM1 (ENSG00000142453) C19orf38 (ENSG00000214212) TMED1 (ENSG00000099203) DNM2 (ENSG00000079805) QTRT1 (ENSG00000213339) ILF3 (ENSG00000129351) SLC44A2 (ENSG00000129353) AP1M2 (ENSG00000129354) #21 CDKN2D (ENSG00000129355) #22 KRI1 (ENSG00000129347) ATG4D (ENSG00000130734) S1PR5 (ENSG00000180739) #25 KEAP1 (ENSG00000079999) #24 PDE4A (ENSG00000065989) CDC37 (ENSG00000105401) TYK2 (ENSG00000105397) ICAM3 (ENSG00000076662) RAVER1 (ENSG00000161847) FDX2 (ENSG00000267673) #26 ZGLP1 (ENSG00000220201) #27 ICAM5 (ENSG00000105376) ICAM4 (ENSG00000105371) ICAM1 (ENSG00000090339) MRPL4 (ENSG00000105364) Gorilla MODERN SPECIES 10 ENSGGOG00000008573 LDLR (ENSGGOG00000003636) SMARCA4 (ENSGGOG00000009882) #19 TIMM29 (ENSGGOG00000000698) YIPF2 (ENSGGOG00000000697) CARM1 (ENSGGOG00000000695) C19orf38 (ENSGGOG00000037632) TMED1 (ENSGGOG00000005979) DNM2 (ENSGGOG00000005968) QTRT1 (ENSGGOG00000023774) ILF3 (ENSGGOG00000004144) ENSGGOG00000026485 ENSGGOG00000043291 SLC44A2 (ENSGGOG00000002619) AP1M2 (ENSGGOG00000004621) #21 CDKN2D (ENSGGOG00000004618) #22 KRI1 (ENSGGOG00000014637) ATG4D (ENSGGOG00000001366) KEAP1 (ENSGGOG00000001935) #24 PDE4A (ENSGGOG00000026422) CDC37 (ENSGGOG00000008098) TYK2 (ENSGGOG00000006028) ENSGGOG00000041269 ENSGGOG00000006021 RAVER1 (ENSGGOG00000006015) ZGLP1 (ENSGGOG00000006002) #27 ICAM5 (ENSGGOG00000005992) ICAM4 (ENSGGOG00000005987) ICAM1 (ENSGGOG00000005980) ENSGGOG00000036529 S1PR2 (ENSGGOG00000004193) ##25 Orangutan MODERN SPECIES 10 KANK2 (ENSPPYG00000009571) SPC24 (ENSPPYG00000033971) LDLR (ENSPPYG00000009569) SMARCA4 (ENSPPYG00000009568) #19 TIMM29 (ENSPPYG00000009567) YIPF2 (ENSPPYG00000009566) CARM1 (ENSPPYG00000009565) C19orf38 (ENSPPYG00000009564) TMED1 (ENSPPYG00000009563) DNM2 (ENSPPYG00000009562) QTRT1 (ENSPPYG00000009561) ILF3 (ENSPPYG00000029648) ENSPPYG00000034793 SLC44A2 (ENSPPYG00000009559) AP1M2 (ENSPPYG00000009558) #21 CDKN2D (ENSPPYG00000009557) #22 KRI1 (ENSPPYG00000009556) ATG4D (ENSPPYG00000036362) S1PR5 (ENSPPYG00000009554) #25 KEAP1 (ENSPPYG00000009553) #24 PDE4A (ENSPPYG00000009552) CDC37 (ENSPPYG00000009551) TYK2 (ENSPPYG00000010516) ENSPPYG00000036913 ENSPPYG00000010514 FDX2 (ENSPPYG00000009550) #26 ZGLP1 (ENSPPYG00000029769) #27 ICAM5 (ENSPPYG00000031661) ENSPPYG00000009549 ICAM1 (ENSPPYG00000009548) ENSPPYG00000009547 Gibbon MODERN SPECIES SPC24 (ENSNLEG00000012487) ENSNLEG00000012467 SMARCA4 (ENSNLEG00000012389) #19 TIMM29 (ENSNLEG00000012388) YIPF2 (ENSNLEG00000012384) CARM1 (ENSNLEG00000012371) ENSNLEG00000031325 ENSNLEG00000027586 TMED1 (ENSNLEG00000012365) DNM2 (ENSNLEG00000012352) QTRT1 (ENSNLEG00000012343) ILF3 (ENSNLEG00000012290) SLC44A2 (ENSNLEG00000012275) ENSNLEG00000035868 ENSNLEG00000012270 #21 CDKN2D (ENSNLEG00000012265) #22 ENSNLEG00000012256 ATG4D (ENSNLEG00000012244) ENSNLEG00000032388 #25 ENSNLEG00000012241 #24 PDE4A (ENSNLEG00000012207) CDC37 (ENSNLEG00000012202) TYK2 (ENSNLEG00000012193) ENSNLEG00000027633 ENSNLEG00000028546 RAVER1 (ENSNLEG00000012181) FDX2 (ENSNLEG00000012175) #26 ZGLP1 (ENSNLEG00000029808) #27 ICAM4 (ENSNLEG00000028505) ICAM1 (ENSNLEG00000012158) ENSNLEG00000012155 Platyrrhini ANCESTRAL SPECIES 16 ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862.a ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089.i #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00910000147865 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 Cebidae ANCESTRAL SPECIES 20 ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862.a ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089.i.a.a #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Marmoset MODERN SPECIES 14 DOCK6 (ENSCJAG00000079051) KANK2 (ENSCJAG00000005881) SPC24 (ENSCJAG00000005896) LDLR (ENSCJAG00000005907) SMARCA4 (ENSCJAG00000005936) #19 TIMM29 (ENSCJAG00000006287) YIPF2 (ENSCJAG00000006294) CARM1 (ENSCJAG00000006228) C19orf38 (ENSCJAG00000006309) TMED1 (ENSCJAG00000006313) DNM2 (ENSCJAG00000006319) QTRT1 (ENSCJAG00000006506) ILF3 (ENSCJAG00000006374) SLC44A2 (ENSCJAG00000035886) ENSCJAG00000006616 #21 CDKN2D (ENSCJAG00000083382) #22 KRI1 (ENSCJAG00000006629) ATG4D (ENSCJAG00000006637) S1PR5 (ENSCJAG00000041143) #25 KEAP1 (ENSCJAG00000006677) #24 PDE4A (ENSCJAG00000006698) ENSCJAG00000006753 TYK2 (ENSCJAG00000006781) ICAM3 (ENSCJAG00000005644) RAVER1 (ENSCJAG00000005671) FDX2 (ENSCJAG00000080365) #26 ZGLP1 (ENSCJAG00000075845) #27 ICAM5 (ENSCJAG00000005726) ICAM4 (ENSCJAG00000005760) ICAM1 (ENSCJAG00000047562) MRPL4 (ENSCJAG00000005764) Cebidae_a ANCESTRAL SPECIES 9 ENSGT00900000143576 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862.a ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT01100000264612 ENSGT00940000158178 ENSGT00940000159089.i.a.a #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c.e.b ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Bolivian squirrel monkey MODERN SPECIES 150 CDKN2D (ENSSBOG00000024633) #22 KRI1 (ENSSBOG00000035570) ATG4D (ENSSBOG00000030727) KEAP1 (ENSSBOG00000026559) #24 PDE4A (ENSSBOG00000034527) CDC37 (ENSSBOG00000023850) TYK2 (ENSSBOG00000024605) ICAM3 (ENSSBOG00000028180) RAVER1 (ENSSBOG00000023423) FDX2 (ENSSBOG00000033673) #26 ZGLP1 (ENSSBOG00000031281) #27 ICAM5 (ENSSBOG00000021550) ICAM4 (ENSSBOG00000016504) ICAM1 (ENSSBOG00000023183) MRPL4 (ENSSBOG00000020666) S1PR2 (ENSSBOG00000017418) ##25 Capuchin MODERN SPECIES 263 ENSCCAG00000027821 TMED1 (ENSCCAG00000029691) DNM2 (ENSCCAG00000028230) QTRT1 (ENSCCAG00000021651) ILF3 (ENSCCAG00000019834) ENSCCAG00000033418 SLC44A2 (ENSCCAG00000036854) ENSCCAG00000021920 #21 CDKN2D (ENSCCAG00000031903) #22 KRI1 (ENSCCAG00000034336) ATG4D (ENSCCAG00000028581) KEAP1 (ENSCCAG00000028133) #24 PDE4A (ENSCCAG00000027835) CDC37 (ENSCCAG00000024424) TYK2 (ENSCCAG00000023503) ICAM3 (ENSCCAG00000023024) RAVER1 (ENSCCAG00000031723) FDX2 (ENSCCAG00000029890) #26 ZGLP1 (ENSCCAG00000031246) #27 ICAM5 (ENSCCAG00000034532) ICAM4 (ENSCCAG00000035684) ICAM1 (ENSCCAG00000028706) MRPL4 (ENSCCAG00000036054) S1PR2 (ENSCCAG00000019768) ##25 Mas night monkey MODERN SPECIES 937 ENSANAG00000028691 SPC24 (ENSANAG00000037783) LDLR (ENSANAG00000036408) SMARCA4 (ENSANAG00000036991) #19 TIMM29 (ENSANAG00000033123) YIPF2 (ENSANAG00000033787) CARM1 (ENSANAG00000027252) ENSANAG00000030631 TMED1 (ENSANAG00000026228) DNM2 (ENSANAG00000037257) QTRT1 (ENSANAG00000024566) ILF3 (ENSANAG00000026889) ENSANAG00000033056 SLC44A2 (ENSANAG00000025859) ENSANAG00000024668 #21 CDKN2D (ENSANAG00000030388) #22 KRI1 (ENSANAG00000026577) ATG4D (ENSANAG00000026983) KEAP1 (ENSANAG00000023114) #24 PDE4A (ENSANAG00000024994) ENSANAG00000024691 TYK2 (ENSANAG00000036847) ENSANAG00000026066 ICAM3 (ENSANAG00000023726) RAVER1 (ENSANAG00000028226) FDX2 (ENSANAG00000023664) #26 ZGLP1 (ENSANAG00000026424) #27 ICAM5 (ENSANAG00000024954) ICAM4 (ENSANAG00000020931) ICAM1 (ENSANAG00000022000) MRPL4 (ENSANAG00000025428) Tarsier MODERN SPECIES 1423 AP1M2 (ENSTSYG00000032947) #21 CDKN2D (ENSTSYG00000036324) #22 KRI1 (ENSTSYG00000011366) ATG4D (ENSTSYG00000011364) Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Glires ANCESTRAL SPECIES 21 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Lagomorpha ANCESTRAL SPECIES 258 ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159801.B #22 ENSGT00940000159089 #21 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b Rabbit MODERN SPECIES 647 LDLR (ENSOCUG00000000651) SMARCA4 (ENSOCUG00000001787) #19 DNM2 (ENSOCUG00000015302) TIMM29 (ENSOCUG00000003385) YIPF2 (ENSOCUG00000003381) CARM1 (ENSOCUG00000003368) C19orf38 (ENSOCUG00000027943) TMED1 (ENSOCUG00000015317) QTRT1 (ENSOCUG00000021082) ILF3 (ENSOCUG00000013990) SLC44A2 (ENSOCUG00000015558) ENSOCUG00000022727 #22 AP1M2 (ENSOCUG00000024334) #21 KRI1 (ENSOCUG00000014181) ATG4D (ENSOCUG00000014176) S1PR5 (ENSOCUG00000001437) #25 KEAP1 (ENSOCUG00000001435) #24 PDE4A (ENSOCUG00000001428) Rodentia ANCESTRAL SPECIES 17 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Rodentia_B ANCESTRAL SPECIES 42 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Myomorpha ANCESTRAL SPECIES 51 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Muroidea ANCESTRAL SPECIES 58 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Cricetinae ANCESTRAL SPECIES 30 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Chinese hamster chok1gshd MODERN SPECIES 189 Dock6 (ENSCGRG00001024445) Kank2 (ENSCGRG00001019422) Spc24 (ENSCGRG00001015236) Ldlr (ENSCGRG00001014331) Smarca4 (ENSCGRG00001016732) #19 Timm29 (ENSCGRG00001007273) Yipf2 (ENSCGRG00001005089) Carm1 (ENSCGRG00001023212) AB124611 (ENSCGRG00001019412) Tmed1 (ENSCGRG00001018097) Dnm2 (ENSCGRG00001015804) Qtrt1 (ENSCGRG00001001152) Ilf3 (ENSCGRG00001021577) Slc44a2 (ENSCGRG00001014087) Ap1m2 (ENSCGRG00001020691) #21 Cdkn2d (ENSCGRG00001019561) #22 Kri1 (ENSCGRG00001018764) Atg4d (ENSCGRG00001017644) S1pr5 (ENSCGRG00001009679) #25 Keap1 (ENSCGRG00001016562) #24 Pde4a (ENSCGRG00001014442) ENSCGRG00001017764 Tyk2 (ENSCGRG00001016315) Raver1 (ENSCGRG00001013260) Fdx2 (ENSCGRG00001012584) #26 Zglp1 (ENSCGRG00001002376) #27 Icam5 (ENSCGRG00001000449) Icam4 (ENSCGRG00001018219) Icam1 (ENSCGRG00001015045) Mrpl4 (ENSCGRG00001013642) S1pr2 (ENSCGRG00001016552) ##25 Golden Hamster MODERN SPECIES 700 Angptl8 (ENSMAUG00000014435) Kank2 (ENSMAUG00000011226) Spc24 (ENSMAUG00000016753) Ldlr (ENSMAUG00000018237) Smarca4 (ENSMAUG00000020731) #19 Timm29 (ENSMAUG00000016236) Yipf2 (ENSMAUG00000019367) Carm1 (ENSMAUG00000020443) Tmed1 (ENSMAUG00000008835) ENSMAUG00000013381 ENSMAUG00000019307 Qtrt1 (ENSMAUG00000020794) Ilf3 (ENSMAUG00000020405) Slc44a2 (ENSMAUG00000010847) Ap1m2 (ENSMAUG00000012894) #21 Cdkn2d (ENSMAUG00000001161) #22 Kri1 (ENSMAUG00000011484) Atg4d (ENSMAUG00000020205) S1pr5 (ENSMAUG00000000259) #25 Keap1 (ENSMAUG00000007914) #24 Pde4a (ENSMAUG00000013828) Cdc37 (ENSMAUG00000008486) Tyk2 (ENSMAUG00000017865) Raver1 (ENSMAUG00000017948) Fdx2 (ENSMAUG00000016958) #26 Zglp1 (ENSMAUG00000000170) #27 Icam5 (ENSMAUG00000001262) Icam4 (ENSMAUG00000002833) Icam1 (ENSMAUG00000006369) Mrpl4 (ENSMAUG00000013451) S1pr2 (ENSMAUG00000016946) ##25 Cricetidae_B ANCESTRAL SPECIES 16 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Northern American deer mouse MODERN SPECIES 20 Dock6 (ENSPEMG00000010133) Kank2 (ENSPEMG00000000736) Spc24 (ENSPEMG00000009453) Ldlr (ENSPEMG00000021260) Smarca4 (ENSPEMG00000020389) #19 Timm29 (ENSPEMG00000031004) Yipf2 (ENSPEMG00000022941) Carm1 (ENSPEMG00000023286) AB124611 (ENSPEMG00000011218) Tmed1 (ENSPEMG00000014342) Dnm2 (ENSPEMG00000022844) Qtrt1 (ENSPEMG00000009897) ENSPEMG00000000465 Slc44a2 (ENSPEMG00000008320) Ap1m2 (ENSPEMG00000023352) #21 Cdkn2d (ENSPEMG00000030087) #22 Kri1 (ENSPEMG00000024201) Atg4d (ENSPEMG00000004633) S1pr5 (ENSPEMG00000015460) #25 Keap1 (ENSPEMG00000022907) #24 Pde4a (ENSPEMG00000023071) Cdc37 (ENSPEMG00000023710) Tyk2 (ENSPEMG00000011071) Raver1 (ENSPEMG00000016411) Fdx2 (ENSPEMG00000023101) #26 Zglp1 (ENSPEMG00000023438) #27 Icam5 (ENSPEMG00000008387) Icam4 (ENSPEMG00000023979) Icam1 (ENSPEMG00000024025) Mrpl4 (ENSPEMG00000017474) S1pr2 (ENSPEMG00000030885) ##25 Prairie vole MODERN SPECIES 13 Dock6 (ENSMOCG00000015812) Kank2 (ENSMOCG00000008426) Spc24 (ENSMOCG00000023025) Ldlr (ENSMOCG00000016718) Smarca4 (ENSMOCG00000022209) #19 ENSMOCG00000019898 Yipf2 (ENSMOCG00000017806) Carm1 (ENSMOCG00000004215) AB124611 (ENSMOCG00000014256) Tmed1 (ENSMOCG00000007785) Dnm2 (ENSMOCG00000018580) Qtrt1 (ENSMOCG00000019584) Ilf3 (ENSMOCG00000018740) Slc44a2 (ENSMOCG00000014267) Ap1m2 (ENSMOCG00000000638) #21 Cdkn2d (ENSMOCG00000016257) #22 Kri1 (ENSMOCG00000017013) Atg4d (ENSMOCG00000002959) S1pr5 (ENSMOCG00000005836) #25 Keap1 (ENSMOCG00000009445) #24 Pde4a (ENSMOCG00000007095) Cdc37 (ENSMOCG00000020700) Tyk2 (ENSMOCG00000017994) Raver1 (ENSMOCG00000015553) Fdx2 (ENSMOCG00000014317) #26 Zglp1 (ENSMOCG00000011301) #27 Icam5 (ENSMOCG00000002626) Icam4 (ENSMOCG00000019163) ENSMOCG00000013950 Icam1 (ENSMOCG00000013230) Mrpl4 (ENSMOCG00000014755) Murinae ANCESTRAL SPECIES 3 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mus ANCESTRAL SPECIES 4 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mus_A ANCESTRAL SPECIES 4 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mus_B ANCESTRAL SPECIES 3 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143.c #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Mouse MODERN SPECIES 18 Dock6 (ENSMUSG00000032198) Kank2 (ENSMUSG00000032194) Spc24 (ENSMUSG00000074476) Ldlr (ENSMUSG00000032193) Smarca4 (ENSMUSG00000032187) #19 Timm29 (ENSMUSG00000048429) Yipf2 (ENSMUSG00000032182) Carm1 (ENSMUSG00000032185) AB124611 (ENSMUSG00000057191) Tmed1 (ENSMUSG00000032180) Dnm2 (ENSMUSG00000033335) Qtrt1 (ENSMUSG00000002825) Ilf3 (ENSMUSG00000032178) Slc44a2 (ENSMUSG00000057193) Ap1m2 (ENSMUSG00000003309) #21 Cdkn2d (ENSMUSG00000096472) #22 Kri1 (ENSMUSG00000035047) Atg4d (ENSMUSG00000002820) S1pr5 (ENSMUSG00000045087) #25 Keap1 (ENSMUSG00000003308) #24 Pde4a (ENSMUSG00000032177) Cdc37 (ENSMUSG00000019471) Tyk2 (ENSMUSG00000032175) Raver1 (ENSMUSG00000010205) Fdx2 (ENSMUSG00000079677) #26 Zglp1 (ENSMUSG00000079681) #27 Icam5 (ENSMUSG00000032174) Icam4 (ENSMUSG00000001014) Icam1 (ENSMUSG00000037405) Mrpl4 (ENSMUSG00000003299) S1pr2 (ENSMUSG00000043895) ##25 Mus_C ANCESTRAL SPECIES 8 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143.c #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Steppe mouse MODERN SPECIES 3115 Dock6 (ENSMSIG00000015052) Angptl8 (ENSMSIG00000015367) Kank2 (ENSMSIG00000015384) Spc24 (ENSMSIG00000015419) Ldlr (ENSMSIG00000015469) Smarca4 (ENSMSIG00000015575) #19 Carm1 (ENSMSIG00000015744) Yipf2 (ENSMSIG00000015831) AB124611 (ENSMSIG00000015890) Tmed1 (ENSMSIG00000015965) Dnm2 (ENSMSIG00000015982) Qtrt1 (ENSMSIG00000016262) Ilf3 (ENSMSIG00000016302) Slc44a2 (ENSMSIG00000016395) Ap1m2 (ENSMSIG00000016529) #21 Cdkn2d (ENSMSIG00000016582) #22 Kri1 (ENSMSIG00000016603) Atg4d (ENSMSIG00000016653) S1pr5 (ENSMSIG00000016710) #25 Keap1 (ENSMSIG00000016713) #24 Pde4a (ENSMSIG00000016751) Cdc37 (ENSMSIG00000016922) Tyk2 (ENSMSIG00000016941) Raver1 (ENSMSIG00000017020) Fdx2 (ENSMSIG00000017053) #26 Zglp1 (ENSMSIG00000017087) #27 Icam5 (ENSMSIG00000017102) Icam4 (ENSMSIG00000017145) Icam1 (ENSMSIG00000017165) Mrpl4 (ENSMSIG00000017179) S1pr2 (ENSMSIG00000017197) ##25 spretus MODERN SPECIES 18 Dock6 (MGP_SPRETEiJ_G0033007) Kank2 (MGP_SPRETEiJ_G0033006) Spc24 (MGP_SPRETEiJ_G0033005) Ldlr (MGP_SPRETEiJ_G0033004) Smarca4 (MGP_SPRETEiJ_G0033003) #19 Timm29 (MGP_SPRETEiJ_G0033002) Yipf2 (MGP_SPRETEiJ_G0033001) Carm1 (MGP_SPRETEiJ_G0033000) AB124611 (MGP_SPRETEiJ_G0032999) Tmed1 (MGP_SPRETEiJ_G0032998) Dnm2 (MGP_SPRETEiJ_G0032997) Qtrt1 (MGP_SPRETEiJ_G0032996) Ilf3 (MGP_SPRETEiJ_G0032995) Slc44a2 (MGP_SPRETEiJ_G0032994) Ap1m2 (MGP_SPRETEiJ_G0032993) #21 Cdkn2d (MGP_SPRETEiJ_G0032992) #22 Kri1 (MGP_SPRETEiJ_G0032991) Atg4d (MGP_SPRETEiJ_G0032990) S1pr5 (MGP_SPRETEiJ_G0032989) #25 Keap1 (MGP_SPRETEiJ_G0032988) #24 Pde4a (MGP_SPRETEiJ_G0032987) Cdc37 (MGP_SPRETEiJ_G0032986) Tyk2 (MGP_SPRETEiJ_G0032985) Raver1 (MGP_SPRETEiJ_G0032984) Fdx2 (MGP_SPRETEiJ_G0032983) #26 Zglp1 (MGP_SPRETEiJ_G0032982) #27 Icam5 (MGP_SPRETEiJ_G0032981) Icam4 (MGP_SPRETEiJ_G0032980) Icam1 (MGP_SPRETEiJ_G0032979) Mrpl4 (MGP_SPRETEiJ_G0032978) S1pr2 (MGP_SPRETEiJ_G0032977) ##25 Ryukyu mouse MODERN SPECIES 18 MGP_CAROLIEiJ_G0031883 Kank2 (MGP_CAROLIEiJ_G0031882) Spc24 (MGP_CAROLIEiJ_G0031881) Ldlr (MGP_CAROLIEiJ_G0031880) Smarca4 (MGP_CAROLIEiJ_G0031879) #19 Timm29 (MGP_CAROLIEiJ_G0031878) Yipf2 (MGP_CAROLIEiJ_G0031877) Carm1 (MGP_CAROLIEiJ_G0031876) AB124611 (MGP_CAROLIEiJ_G0031875) Tmed1 (MGP_CAROLIEiJ_G0031874) Dnm2 (MGP_CAROLIEiJ_G0031873) Qtrt1 (MGP_CAROLIEiJ_G0031872) Ilf3 (MGP_CAROLIEiJ_G0031871) Slc44a2 (MGP_CAROLIEiJ_G0031870) Ap1m2 (MGP_CAROLIEiJ_G0031869) #21 Cdkn2d (MGP_CAROLIEiJ_G0031868) #22 Kri1 (MGP_CAROLIEiJ_G0031867) Atg4d (MGP_CAROLIEiJ_G0031866) S1pr5 (MGP_CAROLIEiJ_G0031865) #25 Keap1 (MGP_CAROLIEiJ_G0031864) #24 Pde4a (MGP_CAROLIEiJ_G0031863) Cdc37 (MGP_CAROLIEiJ_G0031862) Tyk2 (MGP_CAROLIEiJ_G0031861) Raver1 (MGP_CAROLIEiJ_G0031860) Fdx2 (MGP_CAROLIEiJ_G0031859) #26 Zglp1 (MGP_CAROLIEiJ_G0031858) #27 Icam5 (MGP_CAROLIEiJ_G0031857) Icam4 (MGP_CAROLIEiJ_G0031856) Icam1 (MGP_CAROLIEiJ_G0031855) Mrpl4 (MGP_CAROLIEiJ_G0031854) S1pr2 (MGP_CAROLIEiJ_G0031853) ##25 Shrew mouse MODERN SPECIES 1 Dock6 (MGP_PahariEiJ_G0014749) Kank2 (MGP_PahariEiJ_G0014748) MGP_PahariEiJ_G0014747 Ldlr (MGP_PahariEiJ_G0014746) Smarca4 (MGP_PahariEiJ_G0014745) #19 Timm29 (MGP_PahariEiJ_G0014744) Yipf2 (MGP_PahariEiJ_G0014743) Carm1 (MGP_PahariEiJ_G0014742) AB124611 (MGP_PahariEiJ_G0014741) Tmed1 (MGP_PahariEiJ_G0014740) Dnm2 (MGP_PahariEiJ_G0014739) Qtrt1 (MGP_PahariEiJ_G0014738) Ilf3 (MGP_PahariEiJ_G0014737) Slc44a2 (MGP_PahariEiJ_G0014736) Ap1m2 (MGP_PahariEiJ_G0014735) #21 Cdkn2d (MGP_PahariEiJ_G0014734) #22 Kri1 (MGP_PahariEiJ_G0014733) Atg4d (MGP_PahariEiJ_G0014732) S1pr5 (MGP_PahariEiJ_G0014731) #25 Keap1 (MGP_PahariEiJ_G0014730) #24 Pde4a (MGP_PahariEiJ_G0014729) Cdc37 (MGP_PahariEiJ_G0014728) Tyk2 (MGP_PahariEiJ_G0014727) Raver1 (MGP_PahariEiJ_G0014726) Fdx2 (MGP_PahariEiJ_G0014725) #26 Zglp1 (MGP_PahariEiJ_G0014724) #27 Icam5 (MGP_PahariEiJ_G0014723) Icam4 (MGP_PahariEiJ_G0014722) Icam1 (MGP_PahariEiJ_G0014721) Mrpl4 (MGP_PahariEiJ_G0014720) S1pr2 (MGP_PahariEiJ_G0014719) ##25 Rat MODERN SPECIES 18 Angptl8 (ENSRNOG00000011490) Dock6 (ENSRNOG00000010652) Kank2 (ENSRNOG00000010643) Spc24 (ENSRNOG00000029862) Ldlr (ENSRNOG00000009946) Smarca4 (ENSRNOG00000009271) #19 Yipf2 (ENSRNOG00000022043) Carm1 (ENSRNOG00000031129) LOC691141 (ENSRNOG00000033256) Tmed1 (ENSRNOG00000008037) Dnm2 (ENSRNOG00000007649) Qtrt1 (ENSRNOG00000007158) Ilf3 (ENSRNOG00000022741) Slc44a2 (ENSRNOG00000031824) Ap1m2 (ENSRNOG00000043093) #21 Cdkn2d (ENSRNOG00000064248) #22 Kri1 (ENSRNOG00000057447) Atg4d (ENSRNOG00000047625) S1pr5 (ENSRNOG00000020901) #25 Keap1 (ENSRNOG00000020878) #24 Pde4a (ENSRNOG00000020828) Cdc37 (ENSRNOG00000033426) Tyk2 (ENSRNOG00000032948) Raver1 (ENSRNOG00000020710) Fdx2 (ENSRNOG00000023020) #26 Zglp1 (ENSRNOG00000042601) #27 Icam5 (ENSRNOG00000020694) Icam4 (ENSRNOG00000042078) Icam1 (ENSRNOG00000020679) Mrpl4 (ENSRNOG00000020659) S1pr2 (ENSRNOG00000020653) ##25 Upper Galilee mountains blind mole rat MODERN SPECIES 1514 ENSNGAG00000001659 Tmed1 (ENSNGAG00000004594) Dnm2 (ENSNGAG00000016299) Qtrt1 (ENSNGAG00000012294) ENSNGAG00000009786 Slc44a2 (ENSNGAG00000000063) Ap1m2 (ENSNGAG00000013508) #21 Cdkn2d (ENSNGAG00000020636) #22 Kri1 (ENSNGAG00000000508) Atg4d (ENSNGAG00000000291) S1pr5 (ENSNGAG00000011944) #25 Keap1 (ENSNGAG00000012825) #24 Pde4a (ENSNGAG00000016357) Cdc37 (ENSNGAG00000017380) Tyk2 (ENSNGAG00000003917) Raver1 (ENSNGAG00000001260) Fdx2 (ENSNGAG00000009605) #26 Zglp1 (ENSNGAG00000015996) #27 Icam5 (ENSNGAG00000017094) Icam4 (ENSNGAG00000001140) Icam1 (ENSNGAG00000014166) Mrpl4 (ENSNGAG00000014705) S1pr2 (ENSNGAG00000000186) ##25 Lesser Egyptian jerboa MODERN SPECIES 143 Kank2 (ENSJJAG00000017464) Spc24 (ENSJJAG00000017112) ENSJJAG00000013464 Ldlr (ENSJJAG00000016661) Smarca4 (ENSJJAG00000012877) #19 Timm29 (ENSJJAG00000010999) Yipf2 (ENSJJAG00000010227) Carm1 (ENSJJAG00000008047) AB124611 (ENSJJAG00000002332) Tmed1 (ENSJJAG00000018485) Dnm2 (ENSJJAG00000015316) Qtrt1 (ENSJJAG00000013307) ENSJJAG00000013051 Slc44a2 (ENSJJAG00000011453) Ap1m2 (ENSJJAG00000009862) #21 Cdkn2d (ENSJJAG00000008566) #22 Kri1 (ENSJJAG00000002972) Atg4d (ENSJJAG00000000341) S1pr5 (ENSJJAG00000013383) #25 Keap1 (ENSJJAG00000000119) #24 Pde4a (ENSJJAG00000022269) Cdc37 (ENSJJAG00000021223) Tyk2 (ENSJJAG00000020250) Raver1 (ENSJJAG00000018219) Fdx2 (ENSJJAG00000017700) #26 Zglp1 (ENSJJAG00000017375) #27 Icam5 (ENSJJAG00000016403) Icam4 (ENSJJAG00000016127) Icam1 (ENSJJAG00000014180) Mrpl4 (ENSJJAG00000010573) ENSJJAG00000013403 Rodentia_A ANCESTRAL SPECIES 16 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Sciuridae ANCESTRAL SPECIES 20 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143.b #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Marmotini ANCESTRAL SPECIES 41 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143.b #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Marmotini_b ANCESTRAL SPECIES 40 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143.b #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Squirrel DUPLICATION Squirrel MODERN SPECIES 259 DOCK6 (ENSSTOG00000023652) KANK2 (ENSSTOG00000008035) SPC24 (ENSSTOG00000008026) LDLR (ENSSTOG00000007999) SMARCA4 (ENSSTOG00000007939) #19 TIMM29 (ENSSTOG00000026705) YIPF2 (ENSSTOG00000007905) CARM1 (ENSSTOG00000007864) C19orf38 (ENSSTOG00000024893) TMED1 (ENSSTOG00000023250) DNM2 (ENSSTOG00000007826) QTRT1 (ENSSTOG00000020466) ILF3 (ENSSTOG00000007786) SLC44A2 (ENSSTOG00000007737) AP1M2 (ENSSTOG00000007719) #21 ENSSTOG00000023338 #22 KRI1 (ENSSTOG00000007660) ATG4D (ENSSTOG00000023750) S1PR5 (ENSSTOG00000024850) #25 KEAP1 (ENSSTOG00000010114) #24 PDE4A (ENSSTOG00000027947) CDC37 (ENSSTOG00000015962) TYK2 (ENSSTOG00000003264) RAVER1 (ENSSTOG00000003241) FDX2 (ENSSTOG00000008207) #26 ZGLP1 (ENSSTOG00000021194) #27 ICAM5 (ENSSTOG00000008181) ICAM4 (ENSSTOG00000019729) ICAM1 (ENSSTOG00000031629) MRPL4 (ENSSTOG00000030121) S1PR2 (ENSSTOG00000022687) ##25 Squirrel MODERN SPECIES 283 NAP1L2 (ENSSTOG00000025991) ENSSTOG00000031172 ENSSTOG00000029279 CDX4 (ENSSTOG00000028493) ENSSTOG00000034510 CHIC1 (ENSSTOG00000007909) ENSSTOG00000026893 ENSSTOG00000023848 ZCCHC13 (ENSSTOG00000011570) SLC16A2 (ENSSTOG00000026933) RLIM (ENSSTOG00000023752) NEXMIF (ENSSTOG00000029557) ABCB7 (ENSSTOG00000011334) ENSSTOG00000025861 #22 UPRT (ENSSTOG00000007045) ZDHHC15 (ENSSTOG00000001592) MAGEE2 (ENSSTOG00000026571) ENSSTOG00000033839 PBDC1 (ENSSTOG00000000892) MAGEE1 (ENSSTOG00000010904) ENSSTOG00000028105 FGF16 (ENSSTOG00000014766) ATRX (ENSSTOG00000027917) MAGT1 (ENSSTOG00000010870) COX7B (ENSSTOG00000030127) ATP7A (ENSSTOG00000002640) ENSSTOG00000007716 Arctic ground squirrel MODERN SPECIES 217 DOCK6 (ENSUPAG00010003421) KANK2 (ENSUPAG00010003372) SPC24 (ENSUPAG00010003350) LDLR (ENSUPAG00010003299) SMARCA4 (ENSUPAG00010003222) #19 TIMM29 (ENSUPAG00010003216) YIPF2 (ENSUPAG00010003190) CARM1 (ENSUPAG00010003160) C19orf38 (ENSUPAG00010003139) TMED1 (ENSUPAG00010003125) DNM2 (ENSUPAG00010002497) QTRT1 (ENSUPAG00010002480) ILF3 (ENSUPAG00010002202) SLC44A2 (ENSUPAG00010002115) AP1M2 (ENSUPAG00010002081) #21 CDKN2D (ENSUPAG00010002067) #22 KRI1 (ENSUPAG00010002031) ATG4D (ENSUPAG00010002014) ENSUPAG00010002004 #25 KEAP1 (ENSUPAG00010001991) #24 PDE4A (ENSUPAG00010001873) CDC37 (ENSUPAG00010001857) TYK2 (ENSUPAG00010001822) ICAM3 (ENSUPAG00010001065) RAVER1 (ENSUPAG00010001012) FDX2 (ENSUPAG00010001004) #26 ZGLP1 (ENSUPAG00010000992) #27 ICAM5 (ENSUPAG00010000960) ICAM4 (ENSUPAG00010000954) ICAM1 (ENSUPAG00010000950) MRPL4 (ENSUPAG00010000934) Eurasian red squirrel MODERN SPECIES 7 ANGPTL8 (ENSSVLG00005024122) DOCK6 (ENSSVLG00005024084) KANK2 (ENSSVLG00005024021) SPC24 (ENSSVLG00005024002) LDLR (ENSSVLG00005023861) YIPF2 (ENSSVLG00005022404) CARM1 (ENSSVLG00005022155) C19orf38 (ENSSVLG00005022088) TMED1 (ENSSVLG00005022048) DNM2 (ENSSVLG00005021854) QTRT1 (ENSSVLG00005021743) ILF3 (ENSSVLG00005021649) ENSSVLG00005021542 SLC44A2 (ENSSVLG00005021433) ENSSVLG00005021219 #21 CDKN2D (ENSSVLG00005021167) #22 KRI1 (ENSSVLG00005020995) ATG4D (ENSSVLG00005020947) S1PR5 (ENSSVLG00005020921) #25 KEAP1 (ENSSVLG00005020889) #24 PDE4A (ENSSVLG00005020638) CDC37 (ENSSVLG00005020567) TYK2 (ENSSVLG00005020519) ICAM3 (ENSSVLG00005020483) RAVER1 (ENSSVLG00005020415) FDX2 (ENSSVLG00005020343) #26 ZGLP1 (ENSSVLG00005020288) #27 ICAM5 (ENSSVLG00005020255) ICAM4 (ENSSVLG00005020213) ICAM1 (ENSSVLG00005020131) MRPL4 (ENSSVLG00005020006) Hystricomorpha ANCESTRAL SPECIES 19 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00900000143551 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Naked mole-rat female MODERN SPECIES 21 SPC24 (ENSHGLG00000005561) LDLR (ENSHGLG00000014530) SMARCA4 (ENSHGLG00000010519) #19 TIMM29 (ENSHGLG00000031869) YIPF2 (ENSHGLG00000005585) CARM1 (ENSHGLG00000007754) C19orf38 (ENSHGLG00000048163) TMED1 (ENSHGLG00000034031) DNM2 (ENSHGLG00000014318) QTRT1 (ENSHGLG00000018553) ENSHGLG00000019494 ENSHGLG00000036847 SLC44A2 (ENSHGLG00000011332) ENSHGLG00000044071 AP1M2 (ENSHGLG00000017835) #21 CDKN2D (ENSHGLG00000013311) #22 KRI1 (ENSHGLG00000015240) ATG4D (ENSHGLG00000007086) S1PR5 (ENSHGLG00000045386) #25 KEAP1 (ENSHGLG00000015222) #24 PDE4A (ENSHGLG00000015878) CDC37 (ENSHGLG00000050693) TYK2 (ENSHGLG00000015161) ICAM3 (ENSHGLG00000040279) RAVER1 (ENSHGLG00000015460) FDX2 (ENSHGLG00000018345) #26 ZGLP1 (ENSHGLG00000043835) #27 ICAM5 (ENSHGLG00000015929) ICAM4 (ENSHGLG00000042569) ICAM1 (ENSHGLG00000010281) S1PR2 (ENSHGLG00000041926) ##25 Hystricomorpha_a ANCESTRAL SPECIES 15 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Guinea pig MODERN SPECIES 214 ANGPTL8 (ENSCPOG00000030760) DOCK6 (ENSCPOG00000026620) KANK2 (ENSCPOG00000027433) LDLR (ENSCPOG00000006816) SMARCA4 (ENSCPOG00000015549) #19 TIMM29 (ENSCPOG00000031154) YIPF2 (ENSCPOG00000026134) CARM1 (ENSCPOG00000015465) C19orf38 (ENSCPOG00000025508) TMED1 (ENSCPOG00000033109) DNM2 (ENSCPOG00000002296) QTRT1 (ENSCPOG00000025300) ILF3 (ENSCPOG00000013726) SLC44A2 (ENSCPOG00000013720) AP1M2 (ENSCPOG00000026213) #21 CDKN2D (ENSCPOG00000035178) #22 KRI1 (ENSCPOG00000010323) ATG4D (ENSCPOG00000010314) Hystricomorpha_b ANCESTRAL SPECIES 17 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Long-tailed chinchilla MODERN SPECIES 202 TSPAN16 (ENSCLAG00000008629) ANGPTL8 (ENSCLAG00000007166) DOCK6 (ENSCLAG00000015319) LDLR (ENSCLAG00000015453) SMARCA4 (ENSCLAG00000011946) #19 TIMM29 (ENSCLAG00000014951) YIPF2 (ENSCLAG00000011701) CARM1 (ENSCLAG00000011012) C19orf38 (ENSCLAG00000009782) TMED1 (ENSCLAG00000008870) DNM2 (ENSCLAG00000008156) QTRT1 (ENSCLAG00000009859) ILF3 (ENSCLAG00000011537) SLC44A2 (ENSCLAG00000017339) AP1M2 (ENSCLAG00000015388) #21 CDKN2D (ENSCLAG00000016365) #22 KRI1 (ENSCLAG00000006582) ATG4D (ENSCLAG00000004668) S1PR5 (ENSCLAG00000011673) #25 KEAP1 (ENSCLAG00000011003) #24 PDE4A (ENSCLAG00000005445) CDC37 (ENSCLAG00000004550) TYK2 (ENSCLAG00000013417) RAVER1 (ENSCLAG00000009336) FDX2 (ENSCLAG00000007657) #26 ZGLP1 (ENSCLAG00000006578) #27 ICAM5 (ENSCLAG00000004832) ICAM4 (ENSCLAG00000006269) ICAM1 (ENSCLAG00000005350) MRPL4 (ENSCLAG00000004552) S1PR2 (ENSCLAG00000017915) ##25 Degu MODERN SPECIES 91 ANGPTL8 (ENSODEG00000015983) KANK2 (ENSODEG00000015842) SPC24 (ENSODEG00000016091) LDLR (ENSODEG00000015446) SMARCA4 (ENSODEG00000017127) #19 TIMM29 (ENSODEG00000015866) YIPF2 (ENSODEG00000015957) CARM1 (ENSODEG00000015950) C19orf38 (ENSODEG00000015704) TMED1 (ENSODEG00000016351) DNM2 (ENSODEG00000016299) QTRT1 (ENSODEG00000015894) ILF3 (ENSODEG00000015951) SLC44A2 (ENSODEG00000016516) AP1M2 (ENSODEG00000016673) #21 CDKN2D (ENSODEG00000016627) #22 KRI1 (ENSODEG00000016083) ATG4D (ENSODEG00000016344) S1PR5 (ENSODEG00000020555) #25 KEAP1 (ENSODEG00000016128) #24 PDE4A (ENSODEG00000016246) CDC37 (ENSODEG00000016453) TYK2 (ENSODEG00000016347) RAVER1 (ENSODEG00000016260) FDX2 (ENSODEG00000016614) #26 ENSODEG00000016522 #27 ICAM5 (ENSODEG00000016352) ICAM4 (ENSODEG00000016513) ICAM1 (ENSODEG00000016545) MRPL4 (ENSODEG00000016194) S1PR2 (ENSODEG00000020460) ##25 Atlantogenata ANCESTRAL SPECIES 41 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Afrotheria ANCESTRAL SPECIES 38 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Afrotheria_a ANCESTRAL SPECIES 39 ENSGT00940000159313 ENSGT00940000161012 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000162311 ENSGT00390000014512 Elephant MODERN SPECIES 270 ANGPTL8 (ENSLAFG00000028690) KANK2 (ENSLAFG00000022674) ENSLAFG00000029480 LDLR (ENSLAFG00000000360) SMARCA4 (ENSLAFG00000001433) #19 TIMM29 (ENSLAFG00000022030) YIPF2 (ENSLAFG00000004436) CARM1 (ENSLAFG00000004431) C19orf38 (ENSLAFG00000030795) TMED1 (ENSLAFG00000026891) DNM2 (ENSLAFG00000003417) QTRT1 (ENSLAFG00000020858) ILF3 (ENSLAFG00000021667) SLC44A2 (ENSLAFG00000016829) AP1M2 (ENSLAFG00000001589) #21 CDKN2D (ENSLAFG00000032625) #22 KRI1 (ENSLAFG00000021854) ATG4D (ENSLAFG00000011701) S1PR5 (ENSLAFG00000030547) #25 KEAP1 (ENSLAFG00000017907) #24 ENSLAFG00000032058 CDC37 (ENSLAFG00000026818) TYK2 (ENSLAFG00000003922) RAVER1 (ENSLAFG00000003664) FDX2 (ENSLAFG00000022295) #26 ZGLP1 (ENSLAFG00000029015) #27 ICAM5 (ENSLAFG00000026578) ENSLAFG00000013278 MRPL4 (ENSLAFG00000015366) S1PR2 (ENSLAFG00000028576) ##25 DNMT1 (ENSLAFG00000002818) Hyrax MODERN SPECIES 606 AP1M2 (ENSPCAG00000014461) #21 CDKN2D (ENSPCAG00000014414) #22 KRI1 (ENSPCAG00000014272) ATG4D (ENSPCAG00000014194) S1PR5 (ENSPCAG00000014178) #25 KEAP1 (ENSPCAG00000014140) #24 PDE4A (ENSPCAG00000014052) CDC37 (ENSPCAG00000014005) Xenarthra ANCESTRAL SPECIES ENSGT00940000159801.B #22 Armadillo MODERN SPECIES 3916 ENSDNOG00000004104 #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000005584 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421.j.b ENSGT00940000163421.j.a.a ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005.i ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000159005.j ENSGT00390000014512 Opossum MODERN SPECIES 2 LDLR (ENSMODG00000006311) SMARCA4 (ENSMODG00000006287) #19 TIMM29 (ENSMODG00000028657) YIPF2 (ENSMODG00000025629) CARM1 (ENSMODG00000006104) C19orf38 (ENSMODG00000006091) TMED1 (ENSMODG00000044610) DNM2 (ENSMODG00000006064) QTRT1 (ENSMODG00000005954) ENSMODG00000029059 ENSMODG00000028035 ENSMODG00000005923 ILF3 (ENSMODG00000005911) SLC44A2 (ENSMODG00000005859) AP1M2 (ENSMODG00000005838) #21 CDKN2D (ENSMODG00000005828) #22 KRI1 (ENSMODG00000005816) ATG4D (ENSMODG00000005790) S1PR5 (ENSMODG00000005761) #25 KEAP1 (ENSMODG00000005745) #24 ENSMODG00000005727 ENSMODG00000045262 CDC37 (ENSMODG00000005701) TYK2 (ENSMODG00000005684) ENSMODG00000049607 RAVER1 (ENSMODG00000005584) ENSMODG00000005546 #26 ICAM5 (ENSMODG00000040312) ENSMODG00000028933 MRPL4 (ENSMODG00000005476) S1PR2 (ENSMODG00000028318) ##25 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421.j.b ENSGT00940000163421.j.a.b ENSGT00940000163421.j.a.a ENSGT00940000163421.i ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000159005.i ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000159005.j ENSGT00390000014512 Diprotodontia ANCESTRAL SPECIES 20 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421.j.b ENSGT00940000163421.j.a.b ENSGT00940000163421.j.a.a ENSGT00940000163421.i ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000159005.j ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Diprotodontia_a ANCESTRAL SPECIES 16 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377.o ENSGT00390000008862 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421.j.b ENSGT00940000163421.j.a.b ENSGT00940000163421.j.a.a ENSGT00940000163421.i ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000162184 ENSGT00940000162431 ENSGT00940000159005.j ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 koala MODERN SPECIES 58 ENSPCIG00000017124 ENSPCIG00000017118 TMED1 (ENSPCIG00000017117) DNM2 (ENSPCIG00000017114) ENSPCIG00000035002 QTRT1 (ENSPCIG00000017110) ENSPCIG00000017107 ENSPCIG00000017106 ENSPCIG00000034604 ENSPCIG00000032816 ENSPCIG00000015441 ENSPCIG00000033447 ILF3 (ENSPCIG00000015447) SLC44A2 (ENSPCIG00000015531) AP1M2 (ENSPCIG00000016957) #21 CDKN2D (ENSPCIG00000035848) #22 KRI1 (ENSPCIG00000018661) ATG4D (ENSPCIG00000018664) S1PR5 (ENSPCIG00000018666) #25 KEAP1 (ENSPCIG00000018668) #24 PDE4A (ENSPCIG00000018672) CDC37 (ENSPCIG00000018680) TYK2 (ENSPCIG00000018684) ENSPCIG00000018689 RAVER1 (ENSPCIG00000018695) ENSPCIG00000034101 #27 ICAM5 (ENSPCIG00000018766) ENSPCIG00000036585 ENSPCIG00000018769 MRPL4 (ENSPCIG00000033688) S1PR2 (ENSPCIG00000018778) ##25 Common wonbat MODERN SPECIES 764 ILF3 (ENSVURG00010024966) SLC44A2 (ENSVURG00010024962) AP1M2 (ENSVURG00010024957) #21 CDKN2D (ENSVURG00010024956) #22 KRI1 (ENSVURG00010024954) ATG4D (ENSVURG00010024952) CDC37 (ENSVURG00010024950) ENSVURG00010024947 RAVER1 (ENSVURG00010024949) FDX2 (ENSVURG00010024945) #26 ENSVURG00010024942 #27 ICAM5 (ENSVURG00010024941) ENSVURG00010024939 ENSVURG00010024937 MRPL4 (ENSVURG00010024936) S1PR2 (ENSVURG00010024934) ##25 ENSVURG00010024933 ENSVURG00010024929 EIF3G (ENSVURG00010024928) Wallaby MODERN SPECIES 3638 AP1M2 (ENSMEUG00000003643) #21 CDKN2D (ENSMEUG00000003638) #22 KRI1 (ENSMEUG00000003620) ENSMEUG00000003607 Tasmanian devil MODERN SPECIES CARM1 (ENSSHAG00000005586) ENSSHAG00000023978 DNM2 (ENSSHAG00000006509) ENSSHAG00000026938 ENSSHAG00000030449 ENSSHAG00000020483 ENSSHAG00000001700 ENSSHAG00000000578 ENSSHAG00000001997 ENSSHAG00000031461 ENSSHAG00000024820 ENSSHAG00000001788 ENSSHAG00000001712 SLC44A2 (ENSSHAG00000004341) AP1M2 (ENSSHAG00000005131) #21 CDKN2D (ENSSHAG00000005312) #22 KRI1 (ENSSHAG00000005378) ATG4D (ENSSHAG00000005520) S1PR5 (ENSSHAG00000006242) #25 KEAP1 (ENSSHAG00000024185) #24 PDE4A (ENSSHAG00000006562) CDC37 (ENSSHAG00000022863) TYK2 (ENSSHAG00000007617) ENSSHAG00000008104 RAVER1 (ENSSHAG00000008181) ENSSHAG00000028563 #27 ENSSHAG00000025294 ICAM5 (ENSSHAG00000032328) MRPL4 (ENSSHAG00000008539) S1PR2 (ENSSHAG00000028683) ##25 ENSSHAG00000008894 Platypus MODERN SPECIES 85 MYDGF (ENSOANG00000041957) TNFAIP8L1 (ENSOANG00000007043) SEMA6B (ENSOANG00000045870) ENSOANG00000013709 ENSOANG00000013710 HDGFL2 (ENSOANG00000040438) UBXN6 (ENSOANG00000002985) CHAF1A (ENSOANG00000030964) ENSOANG00000046062 SH3GL1 (ENSOANG00000012873) MPND (ENSOANG00000038751) QTRT1 (ENSOANG00000044363) ENSOANG00000042646 SLC44A2 (ENSOANG00000050628) AP1M2 (ENSOANG00000010455) #21 CDKN2D (ENSOANG00000010456) #22 KRI1 (ENSOANG00000039875) ATG4D (ENSOANG00000009372) S1PR5 (ENSOANG00000049448) #25 KEAP1 (ENSOANG00000009371) #24 ENSOANG00000043439 CDC37 (ENSOANG00000013393) TYK2 (ENSOANG00000037034) RAVER1 (ENSOANG00000039656) FDX2 (ENSOANG00000022666) #26 ENSOANG00000031406 ENSOANG00000013892 MRPL4 (ENSOANG00000045427) S1PR2 (ENSOANG00000037970) ##25 DNMT1 (ENSOANG00000012255) EIF3G (ENSOANG00000028960) Sauria ANCESTRAL SPECIES 22 ENSGT00940000159313 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Lepidosauria ANCESTRAL SPECIES 44 ENSGT00940000159313 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Episquamata ANCESTRAL SPECIES 6 ENSGT00940000158731 ENSGT00390000017736.a ENSGT00390000014577.a ENSGT00940000163990.b.b ENSGT00670000098076 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT01030000234575.c.b ENSGT00940000159130 ENSGT00950000183036.b ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000161046 ENSGT00940000161012 ENSGT00940000159313 Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000158731 ENSGT00390000017736.a ENSGT00390000014577.a ENSGT00940000163990.b.b ENSGT00670000098076 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089.u #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT01030000234575.c.b ENSGT00940000159130 ENSGT00950000183036.b ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000161046 ENSGT00940000161012 ENSGT00940000159313 Elapidae ANCESTRAL SPECIES 21 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089.u #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000159130.q.b ENSGT00950000183036.b ENSGT00940000158718.c ENSGT00940000161423 ENSGT00940000161046 ENSGT00940000161012 ENSGT00940000159313 ENSGT00940000157552 ENSGT00390000016298.a ENSGT00390000008201 ENSGT00940000158145 Indian cobra MODERN SPECIES 1 TIMM29 (ENSNNAG00000017806) ENSNNAG00000017802 TRPC4 (ENSNNAG00000017797) GABARAPL1 (ENSNNAG00000017793) M6PR (ENSNNAG00000017792) PHC1 (ENSNNAG00000017781) AICDA (ENSNNAG00000017776) ENSNNAG00000017771 RIMKLB (ENSNNAG00000017768) DNM2 (ENSNNAG00000017762) QTRT1 (ENSNNAG00000017754) ILF3 (ENSNNAG00000017729) SLC44A2 (ENSNNAG00000017481) ENSNNAG00000017404 AP1M2 (ENSNNAG00000017398) #21 CDKN2D (ENSNNAG00000017393) #22 KRI1 (ENSNNAG00000017375) ATG4D (ENSNNAG00000017364) ILVBL (ENSNNAG00000017276) ENSNNAG00000017248 SYDE1 (ENSNNAG00000017236) ENSNNAG00000017220 ENSNNAG00000017217 ENSNNAG00000017204 MCOLN1 (ENSNNAG00000017190) ENSNNAG00000017181 ENSNNAG00000017174 ENSNNAG00000017167 KANK2 (ENSNNAG00000017122) DOCK6 (ENSNNAG00000013566) RAB3D (ENSNNAG00000013132) Elapidae_a ANCESTRAL SPECIES 77 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089.u #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b.b ENSGT00530000063000.a.a.b.a ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000159130.q.b ENSGT00950000183036.b ENSGT00940000158718.c ENSGT00940000161046 ENSGT00940000161012 ENSGT00940000159313 ENSGT00940000157552 ENSGT00390000016298.a ENSGT00390000008201 ENSGT00940000158145 Acanthophiinae ANCESTRAL SPECIES 27 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089.u #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b.a ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000159130.q.b ENSGT00950000183036.b ENSGT00940000158718.c ENSGT00940000155853 ENSGT00940000156689 ENSGT00940000164999 ENSGT00390000008938 ENSGT00390000018089 ENSGT00940000156868 ENSGT00390000013765 ENSGT00390000005084 Eastern brown snake MODERN SPECIES 87 DNM2 (ENSPTXG00000011145) QTRT1 (ENSPTXG00000011149) ILF3 (ENSPTXG00000011150) SLC44A2 (ENSPTXG00000011151) ENSPTXG00000011152 ENSPTXG00000011153 #21 CDKN2D (ENSPTXG00000011154) #22 KRI1 (ENSPTXG00000011155) ATG4D (ENSPTXG00000011156) ENSPTXG00000011157 ILVBL (ENSPTXG00000011158) SYDE1 (ENSPTXG00000011159) PNPLA6 (ENSPTXG00000011193) MCOLN1 (ENSPTXG00000017319) ENSPTXG00000017320 ENSPTXG00000017321 LDLR (ENSPTXG00000017322) KANK2 (ENSPTXG00000017323) DOCK6 (ENSPTXG00000017433) RAB3D (ENSPTXG00000018875) TMEM205 (ENSPTXG00000018876) PLPPR2 (ENSPTXG00000018877) Mainland tiger snake MODERN SPECIES 119 ILF3 (ENSNSUG00000016259) SLC44A2 (ENSNSUG00000016258) ENSNSUG00000016257 #21 CDKN2D (ENSNSUG00000016256) #22 KRI1 (ENSNSUG00000016249) ATG4D (ENSNSUG00000016248) ILVBL (ENSNSUG00000016247) SYDE1 (ENSNSUG00000016244) PNPLA6 (ENSNSUG00000016242) MCOLN1 (ENSNSUG00000016239) ENSNSUG00000016237 ENSNSUG00000016236 LDLR (ENSNSUG00000016078) KANK2 (ENSNSUG00000016045) ENSNSUG00000016044 ENSNSUG00000016042 ENSNSUG00000016041 ENSNSUG00000016039 ENSNSUG00000016038 Blue-lipped sea krait MODERN SPECIES 8171 CDKN2D (ENSLLTG00000012224) #22 Lizard MODERN SPECIES 1 ENSACAG00000043311 ENSACAG00000035333 ENSACAG00000044088 ENSACAG00000015139 ENSACAG00000015317 TIMM29 (ENSACAG00000041442) YIPF2 (ENSACAG00000015324) CARM1 (ENSACAG00000015347) TMED1 (ENSACAG00000015386) DNM2 (ENSACAG00000015436) ENSACAG00000015590 ENSACAG00000015630 ILF3 (ENSACAG00000015632) SLC44A2 (ENSACAG00000015726) AP1M2 (ENSACAG00000015870) #21 CDKN2D (ENSACAG00000015955) #22 KRI1 (ENSACAG00000015966) ENSACAG00000026255 ATG4D (ENSACAG00000015993) S1PR5 (ENSACAG00000016058) #25 ENSACAG00000016064 ENSACAG00000016096 ENSACAG00000016113 ENSACAG00000016134 ENSACAG00000016313 ENSACAG00000039153 ENSACAG00000043906 ENSACAG00000016354 ENSACAG00000041676 ENSACAG00000016557 RASAL3 (ENSACAG00000016567) Laterata ANCESTRAL SPECIES 7 ENSGT00390000017736.a ENSGT00390000014577.a ENSGT00940000163018 ENSGT00940000163990.a ENSGT00670000098076 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT01030000234575.c.b ENSGT00940000159130 ENSGT00950000183036.b.c ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000161046 ENSGT00940000161012 ENSGT00940000159313 Argentine black and white tegu MODERN SPECIES 45 ENSSMRG00000004557 ENSSMRG00000004560 ENSSMRG00000004573 ENSSMRG00000004601 TIMM29 (ENSSMRG00000004611) YIPF2 (ENSSMRG00000004613) CARM1 (ENSSMRG00000004619) TMED1 (ENSSMRG00000004629) DNM2 (ENSSMRG00000004636) QTRT1 (ENSSMRG00000004655) ENSSMRG00000004662 ENSSMRG00000004663 ILF3 (ENSSMRG00000004665) SLC44A2 (ENSSMRG00000004687) AP1M2 (ENSSMRG00000004709) #21 CDKN2D (ENSSMRG00000004717) #22 KRI1 (ENSSMRG00000004719) ENSSMRG00000004733 ATG4D (ENSSMRG00000004737) S1PR5 (ENSSMRG00000004740) #25 ILVBL (ENSSMRG00000004757) SYDE1 (ENSSMRG00000004759) ENSSMRG00000004761 PNPLA6 (ENSSMRG00000004764) ENSSMRG00000004785 ENSSMRG00000004792 PLA1A (ENSSMRG00000004830) POPDC2 (ENSSMRG00000004843) CFAP91 (ENSSMRG00000004857) GSK3B (ENSSMRG00000004891) ENSSMRG00000004908 Common wall lizard MODERN SPECIES 8 ENSPMRG00000022331 TIMM29 (ENSPMRG00000022338) YIPF2 (ENSPMRG00000022341) ENSPMRG00000022344 CARM1 (ENSPMRG00000022349) TMED1 (ENSPMRG00000022360) DNM2 (ENSPMRG00000022363) QTRT1 (ENSPMRG00000022375) ENSPMRG00000022383 ENSPMRG00000022385 ENSPMRG00000022392 ENSPMRG00000022395 ILF3 (ENSPMRG00000022429) SLC44A2 (ENSPMRG00000017149) AP1M2 (ENSPMRG00000017933) #21 CDKN2D (ENSPMRG00000017968) #22 KRI1 (ENSPMRG00000017975) GAL3ST3 (ENSPMRG00000017991) ATG4D (ENSPMRG00000018001) ENSPMRG00000018037 #25 ENSPMRG00000018045 #25 ENSPMRG00000018058 ILVBL (ENSPMRG00000018146) SYDE1 (ENSPMRG00000018494) PNPLA6 (ENSPMRG00000019012) MCOLN1 (ENSPMRG00000022249) CYP4F22 (ENSPMRG00000022362) ENSPMRG00000022591 PGLYRP2 (ENSPMRG00000022596) RASAL3 (ENSPMRG00000022609) ENSPMRG00000022644 tuatara MODERN SPECIES 1327 ENSSPUG00000002943 CDCA5 (ENSSPUG00000002930) ENSSPUG00000002898 SNX15 (ENSSPUG00000002865) ARL2 (ENSSPUG00000002850) ENSSPUG00000002569 SLC44A2 (ENSSPUG00000002524) CDKN2D (ENSSPUG00000002515) #22 ENSSPUG00000002511 #21 KRI1 (ENSSPUG00000002483) ATG4D (ENSSPUG00000002362) S1PR5 (ENSSPUG00000002333) #25 KEAP1 (ENSSPUG00000002322) #24 ENSSPUG00000002307 PDE4A (ENSSPUG00000002280) CDC37 (ENSSPUG00000002268) ENSSPUG00000002258 FDX2 (ENSSPUG00000002158) #26 ENSSPUG00000002138 ENSSPUG00000002134 Archelosauria ANCESTRAL SPECIES 40 ENSGT00940000159313 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00950000182923.A ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Cryptodira ANCESTRAL SPECIES 45 ENSGT00940000159313 ENSGT00940000161012 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 ENSGT00940000172524 Testudinoidea ANCESTRAL SPECIES 38 ENSGT00940000161012.a ENSGT00940000161012.b.b ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178.f ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005.s.a.b ENSGT00940000159005.s.b.b ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 Testudinidae ANCESTRAL SPECIES 59 ENSGT00940000159313 ENSGT00940000161012.a ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178.f ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00940000159005.s.a.b ENSGT00940000159005.s.b.b ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 ENSGT00390000005100 Goode s thornscrub tortoise MODERN SPECIES 152 DOCK6 (ENSGEVG00005013294) KANK2 (ENSGEVG00005013171) LDLR (ENSGEVG00005013119) SMARCA4 (ENSGEVG00005013014) #19 TIMM29 (ENSGEVG00005012977) YIPF2 (ENSGEVG00005012953) CARM1 (ENSGEVG00005012888) ENSGEVG00005012855 TMED1 (ENSGEVG00005012804) DNM2 (ENSGEVG00005012668) QTRT1 (ENSGEVG00005012604) ENSGEVG00005012568 ILF3 (ENSGEVG00005012517) SLC44A2 (ENSGEVG00005012442) AP1M2 (ENSGEVG00005012248) #21 CDKN2D (ENSGEVG00005012225) #22 ENSGEVG00005012156 ENSGEVG00005012135 ATG4D (ENSGEVG00005012059) S1PR5 (ENSGEVG00005011999) #25 KEAP1 (ENSGEVG00005011978) #24 SPC24 (ENSGEVG00005011958) PDE4A (ENSGEVG00005011879) CDC37 (ENSGEVG00005011840) TYK2 (ENSGEVG00005011784) RAVER1 (ENSGEVG00005019864) ENSGEVG00005019859 #26 ENSGEVG00005019771 ENSGEVG00005019702 ENSGEVG00005019695 ENSGEVG00005019679 Abingdon island giant tortoise MODERN SPECIES 727 ENSCABG00000004311 ENSCABG00000004312 LDLR (ENSCABG00000004317) SMARCA4 (ENSCABG00000004334) #19 TIMM29 (ENSCABG00000004350) YIPF2 (ENSCABG00000004351) CARM1 (ENSCABG00000004353) TMED1 (ENSCABG00000004354) DNM2 (ENSCABG00000004356) QTRT1 (ENSCABG00000004363) ENSCABG00000004371 ENSCABG00000004386 ILF3 (ENSCABG00000004393) SLC44A2 (ENSCABG00000004399) AP1M2 (ENSCABG00000004408) #21 CDKN2D (ENSCABG00000004480) #22 KRI1 (ENSCABG00000004483) ENSCABG00000004486 ATG4D (ENSCABG00000004488) S1PR5 (ENSCABG00000004491) #25 KEAP1 (ENSCABG00000004500) #24 SPC24 (ENSCABG00000004502) PDE4A (ENSCABG00000004523) Emydidae ANCESTRAL SPECIES 48 ENSGT00940000161012.b.a ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000156719 ENSGT00940000158178.f ENSGT00940000158178.e ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000159005.s.a.b ENSGT00940000159005.s.a.a ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 painted turtle MODERN SPECIES 992 S1PR5 (ENSCPBG00000004985) #25 KEAP1 (ENSCPBG00000004989) #24 SPC24 (ENSCPBG00000004995) ENSCPBG00000005025 AP1M2 (ENSCPBG00000005150) #21 CDKN2D (ENSCPBG00000005185) #22 ENSCPBG00000005190 ATG4D (ENSCPBG00000005212) ENSCPBG00000005230 ENSCPBG00000005246 CLPP (ENSCPBG00000005251) ALKBH7 (ENSCPBG00000005256) PSPN (ENSCPBG00000005261) GTF2F1 (ENSCPBG00000005268) ENSCPBG00000005277 KHSRP (ENSCPBG00000005286) TSPAN16 (ENSCPBG00000005310) ENSCPBG00000005315 DOCK6 (ENSCPBG00000005854) ENSCPBG00000009985 LDLR (ENSCPBG00000009990) Anura ANCESTRAL SPECIES 67 ENSGT00940000161046 ENSGT00940000156887 #19 ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT00940000158445 ENSGT00940000155764.C ENSGT00530000063679.B ENSGT00940000166551 ENSGT00940000163421 ENSGT00940000155117.e.g ENSGT00940000156719 ENSGT00900000143551 ENSGT00940000158178 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00390000005605 ENSGT00530000063000.a.a.b ENSGT01050000244887.A.a.a.a #25 ENSGT00940000159543 #24 ENSGT00390000005584 ENSGT00940000159788.b ENSGT00390000013443.c ENSGT00940000159869 ENSGT00940000160550 ENSGT00470000042444 #27 ENSGT00940000159005 ENSGT00390000014512 ENSGT01050000244887.A.a.a.b ##25 ENSGT00390000005100 ENSGT00510000047802 Frog MODERN SPECIES 3 kcnt2l (ENSXETG00000002262) ENSXETG00000046082 ENSXETG00000037348 ENSXETG00000002261 ENSXETG00000040811 ENSXETG00000045194 ENSXETG00000039116 ENSXETG00000011652 ENSXETG00000042323 ENSXETG00000037381 ilf3 (ENSXETG00000011651) ENSXETG00000041451 slc44a2 (ENSXETG00000011650) ap1m2 (ENSXETG00000027684) #21 ENSXETG00000049143 cdkn2d (ENSXETG00000011649) #22 kri1 (ENSXETG00000011646) atg4d (ENSXETG00000011644) s1pr5 (ENSXETG00000039621) #25 keap1 (ENSXETG00000011638) #24 spc24 (ENSXETG00000027687) pde4a (ENSXETG00000011637) cdc37 (ENSXETG00000011625) tyk2 (ENSXETG00000011623) raver1 (ENSXETG00000011622) zglp1 (ENSXETG00000039819) #27 icam5 (ENSXETG00000027690) ENSXETG00000034765 ENSXETG00000042034 ENSXETG00000022064 ENSXETG00000035655 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000003908 ENSLLEG00000003918 ENSLLEG00000003922 ENSLLEG00000003925 ENSLLEG00000003930 ENSLLEG00000003934 ENSLLEG00000003939 ENSLLEG00000003943 ENSLLEG00000003949 ENSLLEG00000003952 ENSLLEG00000003959 ILF3 (ENSLLEG00000003992) ENSLLEG00000004048 ENSLLEG00000004081 AP1M2 (ENSLLEG00000004092) #21 CDKN2D (ENSLLEG00000004106) #22 KRI1 (ENSLLEG00000004114) ATG4D (ENSLLEG00000004132) S1PR5 (ENSLLEG00000004135) #25 ENSLLEG00000004138 KEAP1 (ENSLLEG00000004140) #24 ENSLLEG00000004143 ENSLLEG00000004149 PDE4A (ENSLLEG00000004157) CDC37 (ENSLLEG00000004179) TYK2 (ENSLLEG00000004188) RAVER1 (ENSLLEG00000004201) ENSLLEG00000004215 #27 ENSLLEG00000004228 ENSLLEG00000004236 ENSLLEG00000004246 Coelacanth MODERN SPECIES 418 ENSLACG00000017314 ECSIT (ENSLACG00000017226) ZNF653 (ENSLACG00000017182) elavl3 (ENSLACG00000016601) ENSLACG00000016391 PRKCSH (ENSLACG00000016148) ODAD3 (ENSLACG00000016002) ENSLACG00000015250 ENSLACG00000015043 ENSLACG00000014678 PLPPR2 (ENSLACG00000014212) AP1M2 (ENSLACG00000013909) #21 CDKN2D (ENSLACG00000013803) #22 KRI1 (ENSLACG00000013401) ENSLACG00000013249 ATG4D (ENSLACG00000012770) MAST1 (ENSLACG00000011873) rtbdn (ENSLACG00000008516) RNASEH2A (ENSLACG00000007789) HOOK2 (ENSLACG00000006401) JUNB (ENSLACG00000001525) Elephant shark MODERN SPECIES 2585 ENSCMIG00000002429 CDKN2D (ENSCMIG00000002437) #22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000159801.B #22 Lamprey MODERN SPECIES 4119 ENSPMAG00000002351 ENSPMAG00000002352 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Coelacanth MODERN SPECIES 3007 ENSLACG00000001239 ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Amniota ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Sauria ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Episquamata ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Toxicofera ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Lizard MODERN SPECIES 1 ENSACAG00000039290 PLPPR1 (ENSACAG00000017418) MRPL50 (ENSACAG00000039458) ALDOB (ENSACAG00000017436) PGAP4 (ENSACAG00000017458) ENSACAG00000017459 ENSACAG00000045268 IFT74 (ENSACAG00000028763) LRRC19 (ENSACAG00000028864) PLAA (ENSACAG00000017506) CAAP1 (ENSACAG00000017515) ENSACAG00000043694 ELAVL2 (ENSACAG00000017521) ENSACAG00000043252 DMRTA1 (ENSACAG00000017537) ENSACAG00000017544 ##22 MTAP (ENSACAG00000017549) ENSACAG00000027003 ENSACAG00000024853 ENSACAG00000017572 ENSACAG00000025902 ENSACAG00000017580 ENSACAG00000042281 ENSACAG00000043191 ENSACAG00000026778 ENSACAG00000037340 HACD4 (ENSACAG00000028887) FOCAD (ENSACAG00000017585) MLLT3 (ENSACAG00000017614) SLC24A2 (ENSACAG00000017625) ACER2 (ENSACAG00000017629) Actinopterygii ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Osteoglossocephalai ANCESTRAL SPECIES 14 ENSGT00940000159660 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d ENSGT00940000155588.a ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00940000156223 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 108 ENSGT00940000158059 ENSGT00940000159660.h ENSGT00940000159984 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.b.b ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218.k ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003.g ENSGT00940000154108.b.a.a ENSGT00940000159801.A.a ##22 ENSGT00950000182991.B ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120.f P. kingsleyae MODERN SPECIES 6 lef1 (ENSPKIG00000012891) hadh (ENSPKIG00000012813) sgms2a (ENSPKIG00000012756) papss1 (ENSPKIG00000012723) ENSPKIG00000012697 aimp1a (ENSPKIG00000012660) ENSPKIG00000012482 tbck (ENSPKIG00000012287) npnta (ENSPKIG00000012155) gstcd (ENSPKIG00000012085) ints12 (ENSPKIG00000012046) ARHGEF38 (ENSPKIG00000012009) ppa2 (ENSPKIG00000011957) TET2 (ENSPKIG00000011904) CXXC4 (ENSPKIG00000011861) ENSPKIG00000011762 ##22 mtap (ENSPKIG00000011717) ndufb6 (ENSPKIG00000011695) TMEM215 (ENSPKIG00000011679) ENSPKIG00000011653 ENSPKIG00000011632 ENSPKIG00000011613 pdcd4a (ENSPKIG00000011507) mogs (ENSPKIG00000011420) ENSPKIG00000011393 FBXO41 (ENSPKIG00000011332) rnf24 (ENSPKIG00000011272) smox (ENSPKIG00000011205) ENSPKIG00000011130 ENSPKIG00000011109 ADRA1D (ENSPKIG00000011098) Asian bonytongue MODERN SPECIES 7 ENSSFOG00015024817 lef1 (ENSSFOG00015018486) hadh (ENSSFOG00015018506) sgms2a (ENSSFOG00015018552) papss1 (ENSSFOG00015025025) ENSSFOG00015018618 aimp1a (ENSSFOG00015018626) tbck (ENSSFOG00015018647) npnta (ENSSFOG00015018747) gstcd (ENSSFOG00015018781) ints12 (ENSSFOG00015018796) ARHGEF38 (ENSSFOG00015018810) ppa2 (ENSSFOG00015018820) TET2 (ENSSFOG00015018838) CXXC4 (ENSSFOG00015018857) ENSSFOG00015032015 ##22 mtap (ENSSFOG00015033003) ndufb6 (ENSSFOG00015018909) TMEM215 (ENSSFOG00015018914) ENSSFOG00015018921 MXD4 (ENSSFOG00015018937) ENSSFOG00015032850 pdcd4a (ENSSFOG00015018958) mogs (ENSSFOG00015018970) ENSSFOG00015025027 FBXO41 (ENSSFOG00015018993) RNF24 (ENSSFOG00015019018) smox (ENSSFOG00015019038) ENSSFOG00015019059 ENSSFOG00015030470 ADRA1D (ENSSFOG00015019108) Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000159801.A.b ##22 P. kingsleyae MODERN SPECIES 374 ENSPKIG00000017156 ##22 RIGI (ENSPKIG00000017174) TOPORS (ENSPKIG00000017196) ENSPKIG00000017221 MXD4 (ENSPKIG00000017270) ENSPKIG00000017313 cyp17a2 (ENSPKIG00000017344) pdcd4a (ENSPKIG00000017390) ENSPKIG00000017439 ENSPKIG00000017452 FBXO41 (ENSPKIG00000017468) CTNNA2 (ENSPKIG00000017496) LRRTM1 (ENSPKIG00000017531) ENSPKIG00000017564 ENSPKIG00000017634 TACR3 (ENSPKIG00000017765) Clupeocephala ANCESTRAL SPECIES 26 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000156796.c.b ENSGT00940000166257 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00950000182934.a.a ENSGT00940000160795 Euteleosteomorpha ANCESTRAL SPECIES 38 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000156796.c.b ENSGT00940000166257 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00940000156223 ENSGT00950000182934.a.a Acanthomorphata ANCESTRAL SPECIES 36 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000156796.c.b ENSGT00940000166257 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000156796.c.b ENSGT00940000166257 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000166257 ENSGT00940000156796.c.b ENSGT00940000161510 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Tiger tail seahorse MODERN SPECIES 518 cyp2u1 (ENSHCOG00000004328) sgms2a (ENSHCOG00000004321) papss1 (ENSHCOG00000004311) dkk2 (ENSHCOG00000004288) aimp1a (ENSHCOG00000004278) tbck (ENSHCOG00000004247) ENSHCOG00000004208 ENSHCOG00000004178 npnta (ENSHCOG00000004139) gstcd (ENSHCOG00000004127) ints12 (ENSHCOG00000004115) ARHGEF38 (ENSHCOG00000004074) ppa2 (ENSHCOG00000003790) TET2 (ENSHCOG00000003746) CXXC4 (ENSHCOG00000003734) ENSHCOG00000003726 ##22 mtap (ENSHCOG00000003721) ENSHCOG00000003671 toporsa (ENSHCOG00000003662) ndufb6 (ENSHCOG00000003650) ENSHCOG00000003638 ENSHCOG00000003623 ncf4 (ENSHCOG00000003589) pvalb7 (ENSHCOG00000003583) baiap2l2b (ENSHCOG00000003572) ENSHCOG00000003557 DNAL4 (ENSHCOG00000003538) ENSHCOG00000003527 pla2g6 (ENSHCOG00000003502) ENSHCOG00000003487 dnaja3b (ENSHCOG00000003463) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000166257 ENSGT00940000161510 ENSGT00940000156796.c.a.e.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Ovalentaria ANCESTRAL SPECIES ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000156796.c.a.e.a ENSGT00940000166257 ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000161510 ENSGT00940000166257 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00950000182969.B.c.a.b ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00950000183029.B.j.c.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000166257 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000159655 ENSGT00950000182969.B.c.a.b ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00950000183029.B.j.c.a ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000161510.u ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Poecilia ANCESTRAL SPECIES 6 ENSGT00940000159655 ENSGT00950000182969.B.c.a.b ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00950000183029.B.j.c.a ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00940000178012 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b NAME_6 ANCESTRAL SPECIES 4 ENSGT00940000160142 ENSGT00940000159655 ENSGT00950000182969.B.c.a.b ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00950000183029.B.j.c.a ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b.c Amazon molly MODERN SPECIES 456 ENSPFOG00000013215 EEF1A1 (ENSPFOG00000013175) tbck (ENSPFOG00000013036) ENSPFOG00000012877 ENSPFOG00000012681 npnta (ENSPFOG00000012587) gstcd (ENSPFOG00000012468) ints12 (ENSPFOG00000012447) ENSPFOG00000023399 TET2 (ENSPFOG00000012090) CXXC4 (ENSPFOG00000012083) ARHGEF38 (ENSPFOG00000012342) ppa2 (ENSPFOG00000012128) TET2 (ENSPFOG00000021899) CXXC4 (ENSPFOG00000012064) ENSPFOG00000012056 ##22 mtap (ENSPFOG00000011997) toporsa (ENSPFOG00000011988) ndufb6 (ENSPFOG00000011987) ENSPFOG00000011962 MXD4 (ENSPFOG00000011915) ENSPFOG00000011899 pdcd4a (ENSPFOG00000011856) mogs (ENSPFOG00000011834) ENSPFOG00000011826 FBXO41 (ENSPFOG00000011684) smox (ENSPFOG00000011634) rnf24 (ENSPFOG00000011626) ccdc86 (ENSPFOG00000011617) glb1 (ENSPFOG00000011420) cldnd1b (ENSPFOG00000011357) Sailfin molly MODERN SPECIES 352 ENSPLAG00000015858 ##22 mtap (ENSPLAG00000015889) toporsa (ENSPLAG00000015891) ndufb6 (ENSPLAG00000015899) ENSPLAG00000015922 MXD4 (ENSPLAG00000015944) ENSPLAG00000015955 pdcd4a (ENSPLAG00000015991) mogs (ENSPLAG00000015994) ENSPLAG00000000602 FBXO41 (ENSPLAG00000016086) smox (ENSPLAG00000016111) rnf24 (ENSPLAG00000016116) ccdc86 (ENSPLAG00000016122) glb1 (ENSPLAG00000016186) cldnd1b (ENSPLAG00000016197) Guppy MODERN SPECIES 439 pax5 (ENSPREG00000006606) melk (ENSPREG00000006562) ENSPREG00000006523 POLQ (ENSPREG00000006445) UBA6 (ENSPREG00000006373) grhprb (ENSPREG00000006318) ZBTB5 (ENSPREG00000006294) ENSPREG00000006272 npnta (ENSPREG00000006200) gstcd (ENSPREG00000006138) ints12 (ENSPREG00000006102) ARHGEF38 (ENSPREG00000006065) ppa2 (ENSPREG00000006039) TET2 (ENSPREG00000006015) CXXC4 (ENSPREG00000005992) ENSPREG00000005931 ##22 mtap (ENSPREG00000005908) ENSPREG00000005897 ndufb6 (ENSPREG00000005786) ENSPREG00000005744 MXD4 (ENSPREG00000005708) ENSPREG00000005666 pdcd4a (ENSPREG00000005622) mogs (ENSPREG00000005610) ENSPREG00000005597 FBXO41 (ENSPREG00000005556) smox (ENSPREG00000005534) rnf24 (ENSPREG00000005496) ccdc86 (ENSPREG00000005478) glb1 (ENSPREG00000005419) cldnd1b (ENSPREG00000005383) Platyfish MODERN SPECIES 19 TNS4 (ENSXMAG00000023115) KRT222 (ENSXMAG00000018192) krt97 (ENSXMAG00000018197) RIMS1 (ENSXMAG00000018211) ENSXMAG00000012035 EEF1A1 (ENSXMAG00000012048) tbck (ENSXMAG00000012060) ENSXMAG00000012085 npnta (ENSXMAG00000012135) gstcd (ENSXMAG00000012151) ints12 (ENSXMAG00000029835) ARHGEF38 (ENSXMAG00000005387) ppa2 (ENSXMAG00000005399) TET2 (ENSXMAG00000005438) CXXC4 (ENSXMAG00000024047) ENSXMAG00000005443 ##22 mtap (ENSXMAG00000005446) ENSXMAG00000025126 ndufb6 (ENSXMAG00000005457) ENSXMAG00000005463 MXD4 (ENSXMAG00000005473) ENSXMAG00000022822 pdcd4a (ENSXMAG00000005480) mogs (ENSXMAG00000021337) ENSXMAG00000026939 FBXO41 (ENSXMAG00000005499) smox (ENSXMAG00000005505) rnf24 (ENSXMAG00000026109) ccdc86 (ENSXMAG00000005529) glb1 (ENSXMAG00000005532) cldnd1b (ENSXMAG00000005570) NAME_4 ANCESTRAL SPECIES 44 ENSGT00940000159655 ENSGT00950000182969.B.c.a.b ENSGT00940000155134.z ENSGT00940000155933.b.b ENSGT00950000183029.B.j.c.a ENSGT00940000158244 ENSGT00940000161510.s ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Sheepshead minnow MODERN SPECIES 689 EEF1A1 (ENSCVAG00000021241) tbck (ENSCVAG00000021423) ENSCVAG00000021468 ENSCVAG00000021488 npnta (ENSCVAG00000021581) gstcd (ENSCVAG00000021643) ints12 (ENSCVAG00000021666) ARHGEF38 (ENSCVAG00000021675) ppa2 (ENSCVAG00000021704) TET2 (ENSCVAG00000021717) CXXC4 (ENSCVAG00000021723) ENSCVAG00000000836 ##22 mtap (ENSCVAG00000021753) toporsa (ENSCVAG00000021760) Mummichog MODERN SPECIES 2490 npnta (ENSFHEG00000022084) gstcd (ENSFHEG00000021983) ints12 (ENSFHEG00000021971) ARHGEF38 (ENSFHEG00000021959) ppa2 (ENSFHEG00000021888) TET2 (ENSFHEG00000021818) CXXC4 (ENSFHEG00000021796) ENSFHEG00000021784 ##22 mtap (ENSFHEG00000021774) toporsa (ENSFHEG00000021727) ndufb6 (ENSFHEG00000021718) ENSFHEG00000021711 MXD4 (ENSFHEG00000021700) ENSFHEG00000021649 pdcd4a (ENSFHEG00000021625) mogs (ENSFHEG00000000528) ENSFHEG00000021579 FBXO41 (ENSFHEG00000021552) smox (ENSFHEG00000021544) rnf24 (ENSFHEG00000021516) ENSFHEG00000021501 glb1 (ENSFHEG00000021496) Oryzias ANCESTRAL SPECIES 15 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000166257.x ENSGT00940000161510.q ENSGT00930000150973.B.e.b ENSGT00390000004446.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c.d ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b.g Oryzias_b ANCESTRAL SPECIES 21 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000166257.x ENSGT00940000161510.q ENSGT00930000150973.B.e.b ENSGT00390000004446.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c.d ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b.g Indian medaka MODERN SPECIES 21 cyp2u1 (ENSOMEG00000006015) sgms2a (ENSOMEG00000006023) papss1 (ENSOMEG00000000132) dkk2 (ENSOMEG00000000755) aimp1a (ENSOMEG00000006090) ENSOMEG00000006113 tbck (ENSOMEG00000006254) ALOX15B (ENSOMEG00000006422) npnta (ENSOMEG00000006485) gstcd (ENSOMEG00000006538) ints12 (ENSOMEG00000006563) ARHGEF38 (ENSOMEG00000006598) ppa2 (ENSOMEG00000006653) TET2 (ENSOMEG00000006676) CXXC4 (ENSOMEG00000006684) ENSOMEG00000006698 ##22 mtap (ENSOMEG00000006729) toporsa (ENSOMEG00000006739) ndufb6 (ENSOMEG00000006749) ENSOMEG00000006788 MXD4 (ENSOMEG00000006816) ENSOMEG00000006836 ENSOMEG00000006852 pdcd4a (ENSOMEG00000006883) mogs (ENSOMEG00000006901) ENSOMEG00000006913 FBXO41 (ENSOMEG00000006954) smox (ENSOMEG00000006997) rnf24 (ENSOMEG00000007042) ccdc86 (ENSOMEG00000007064) glb1 (ENSOMEG00000000166) Javanese ricefish MODERN SPECIES glb1 (ENSOJAG00000003192) sgms2a (ENSOJAG00000003220) papss1 (ENSOJAG00000003251) dkk2 (ENSOJAG00000003491) aimp1a (ENSOJAG00000003494) tbck (ENSOJAG00000003624) ENSOJAG00000004091 npnta (ENSOJAG00000004388) gstcd (ENSOJAG00000004518) ints12 (ENSOJAG00000004828) ENSOJAG00000004849 ppa2 (ENSOJAG00000004874) TET2 (ENSOJAG00000004947) CXXC4 (ENSOJAG00000004968) LRRC18 (ENSOJAG00000004978) ENSOJAG00000005050 ##22 mtap (ENSOJAG00000005086) ENSOJAG00000005229 ndufb6 (ENSOJAG00000005232) ENSOJAG00000005243 MXD4 (ENSOJAG00000005252) ENSOJAG00000005257 pdcd4a (ENSOJAG00000005318) mogs (ENSOJAG00000005652) ENSOJAG00000005713 FBXO41 (ENSOJAG00000005726) smox (ENSOJAG00000005786) rnf24 (ENSOJAG00000005826) ENSOJAG00000005859 glb1 (ENSOJAG00000005942) ENSOJAG00000006637 Oryzias_a ANCESTRAL SPECIES 23 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000166257.x ENSGT00940000178012 ENSGT00930000150973.B.e.b ENSGT00390000004446.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B.c ENSGT00530000064170.c.d ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000178944 ENSGT00390000004554.v ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 Chinese medaka MODERN SPECIES 1094 ENSOSIG00000014031 npnta (ENSOSIG00000014028) GSTCD (ENSOSIG00000014024) ints12 (ENSOSIG00000014020) ARHGEF38 (ENSOSIG00000014015) ppa2 (ENSOSIG00000014014) TET2 (ENSOSIG00000014012) CXXC4 (ENSOSIG00000014011) ENSOSIG00000014008 ##22 ENSOSIG00000014007 toporsa (ENSOSIG00000014005) ndufb6 (ENSOSIG00000014003) ENSOSIG00000013999 ENSOSIG00000013996 ENSOSIG00000013993 MXD4 (ENSOSIG00000013992) ENSOSIG00000013989 pdcd4a (ENSOSIG00000012297) mogs (ENSOSIG00000012288) ENSOSIG00000012286 FBXO41 (ENSOSIG00000012285) smox (ENSOSIG00000012284) rnf24 (ENSOSIG00000012280) ccdc86 (ENSOSIG00000012278) Japanese Medaka HdrR MODERN SPECIES cyp2u1 (ENSORLG00000006861) sgms2a (ENSORLG00000030047) papss1 (ENSORLG00000006836) dkk2 (ENSORLG00000006785) aimp1a (ENSORLG00000006773) tbck (ENSORLG00000006742) ENSORLG00000006725 npnta (ENSORLG00000006656) gstcd (ENSORLG00000006613) ints12 (ENSORLG00000006592) ARHGEF38 (ENSORLG00000006577) ppa2 (ENSORLG00000006564) TET2 (ENSORLG00000022090) CXXC4 (ENSORLG00000006474) ENSORLG00000027879 ENSORLG00000027369 ##22 mtap (ENSORLG00000023618) ENSORLG00000022960 ENSORLG00000006467 ndufb6 (ENSORLG00000006463) ENSORLG00000006456 ENSORLG00000026341 ENSORLG00000023233 MXD4 (ENSORLG00000006439) ENSORLG00000022992 pdcd4a (ENSORLG00000006416) mogs (ENSORLG00000026440) ENSORLG00000028130 FBXO41 (ENSORLG00000006366) smox (ENSORLG00000006356) rnf24 (ENSORLG00000006343) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000166803 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.b ENSGT00940000156796.c.a.e.b.a.b ENSGT00940000166257 ENSGT00940000161510.ab ENSGT00940000156796.c.a.e.b.a.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT01030000234601.o.k.b.a.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.b ENSGT00940000156796.c.a.e.b.a.b ENSGT00940000156796.c.a.e.b.a.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT01030000234601.o.k.b.a.b.b Haplochromini ANCESTRAL SPECIES 3 ENSGT00940000166803 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510.ab ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT01030000234601.o.k.b.a.b.b Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.b ENSGT00940000156796.c.a.e.b.a.b ENSGT00940000156796.c.a.e.b.a.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT01030000234601.o.k.b.a.b.b Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.b ENSGT00940000156796.c.a.e.b.a.b.a ENSGT00940000156796.c.a.e.b.a.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a Zebra mbuna MODERN SPECIES 1109 papss1 (ENSMZEG00005019630) dkk2 (ENSMZEG00005019637) aimp1a (ENSMZEG00005019638) tbck (ENSMZEG00005019651) ENSMZEG00005019669 ENSMZEG00005019673 ENSMZEG00005019686 ENSMZEG00005019690 npnta (ENSMZEG00005019704) gstcd (ENSMZEG00005019714) ints12 (ENSMZEG00005019718) ARHGEF38 (ENSMZEG00005019722) ppa2 (ENSMZEG00005019738) TET2 (ENSMZEG00005019746) CXXC4 (ENSMZEG00005019750) ENSMZEG00005019755 ##22 mtap (ENSMZEG00005019759) toporsa (ENSMZEG00005019763) ndufb6 (ENSMZEG00005019766) ENSMZEG00005019768 MXD4 (ENSMZEG00005019774) ENSMZEG00005019778 pdcd4a (ENSMZEG00005019782) mogs (ENSMZEG00005019789) ENSMZEG00005019793 FBXO41 (ENSMZEG00005019798) smox (ENSMZEG00005019802) rnf24 (ENSMZEG00005019811) ccdc86 (ENSMZEG00005019822) glb1 (ENSMZEG00005019825) ENSMZEG00005019832 P. nyererei MODERN SPECIES 317 papss1 (ENSPNYG00000010023) dkk2 (ENSPNYG00000009981) aimp1a (ENSPNYG00000009958) tbck (ENSPNYG00000009915) ENSPNYG00000009869 ENSPNYG00000009825 ENSPNYG00000009785 npnta (ENSPNYG00000009737) gstcd (ENSPNYG00000009714) ints12 (ENSPNYG00000009692) ARHGEF38 (ENSPNYG00000009674) ppa2 (ENSPNYG00000009619) TET2 (ENSPNYG00000009595) ENSPNYG00000009582 CXXC4 (ENSPNYG00000009577) ENSPNYG00000009537 ##22 mtap (ENSPNYG00000009514) ENSPNYG00000009502 ndufb6 (ENSPNYG00000009497) ENSPNYG00000009476 MXD4 (ENSPNYG00000009456) ENSPNYG00000009413 pdcd4a (ENSPNYG00000009383) mogs (ENSPNYG00000009364) ENSPNYG00000009340 FBXO41 (ENSPNYG00000009254) smox (ENSPNYG00000009223) rnf24 (ENSPNYG00000009186) ENSPNYG00000009153 glb1 (ENSPNYG00000009091) ENSPNYG00000009061 Burton s mouthbrooder MODERN SPECIES 547 cyp2u1 (ENSHBUG00000015834) sgms2a (ENSHBUG00000015820) papss1 (ENSHBUG00000015808) dkk2 (ENSHBUG00000015781) aimp1a (ENSHBUG00000015770) tbck (ENSHBUG00000015730) ENSHBUG00000015611 ENSHBUG00000015592 npnta (ENSHBUG00000015574) gstcd (ENSHBUG00000015455) ints12 (ENSHBUG00000015350) ARHGEF38 (ENSHBUG00000015332) ppa2 (ENSHBUG00000015295) TET2 (ENSHBUG00000015020) CXXC4 (ENSHBUG00000015012) ENSHBUG00000015002 ##22 mtap (ENSHBUG00000014994) Lyretail cichlid MODERN SPECIES 301 papss1 (ENSNBRG00000012609) dkk2 (ENSNBRG00000012636) aimp1a (ENSNBRG00000012670) tbck (ENSNBRG00000012699) ENSNBRG00000012746 ENSNBRG00000012759 ENSNBRG00000012791 ENSNBRG00000012823 npnta (ENSNBRG00000012852) gstcd (ENSNBRG00000012882) ints12 (ENSNBRG00000012937) ARHGEF38 (ENSNBRG00000012944) ppa2 (ENSNBRG00000012976) TET2 (ENSNBRG00000012999) CXXC4 (ENSNBRG00000013019) ENSNBRG00000013026 ##22 mtap (ENSNBRG00000013040) ENSNBRG00000013068 ndufb6 (ENSNBRG00000013078) ENSNBRG00000013086 MXD4 (ENSNBRG00000013109) ENSNBRG00000013134 pdcd4a (ENSNBRG00000013163) mogs (ENSNBRG00000013193) ENSNBRG00000013222 FBXO41 (ENSNBRG00000013240) smox (ENSNBRG00000013280) rnf24 (ENSNBRG00000013295) ccdc86 (ENSNBRG00000013330) glb1 (ENSNBRG00000013350) ENSNBRG00000013390 Nile tilapia MODERN SPECIES 18 sgms2a (ENSONIG00000017507) papss1 (ENSONIG00000017508) dkk2 (ENSONIG00000017511) aimp1a (ENSONIG00000017512) tbck (ENSONIG00000017514) ENSONIG00000017517 ENSONIG00000009404 npnta (ENSONIG00000017524) gstcd (ENSONIG00000017528) ENSONIG00000041364 ints12 (ENSONIG00000017530) ARHGEF38 (ENSONIG00000017531) ppa2 (ENSONIG00000017535) TET2 (ENSONIG00000028706) CXXC4 (ENSONIG00000017539) ENSONIG00000038891 ##22 mtap (ENSONIG00000017542) toporsa (ENSONIG00000040851) ndufb6 (ENSONIG00000017545) ENSONIG00000017547 mxd4 (ENSONIG00000017548) ENSONIG00000034285 pdcd4a (ENSONIG00000017552) mogs (ENSONIG00000017553) ENSONIG00000041519 FBXO41 (ENSONIG00000017557) smox (ENSONIG00000017565) ENSONIG00000031728 rnf24 (ENSONIG00000017567) ccdc86 (ENSONIG00000033689) glb1 (ENSONIG00000017570) Pomacentridae ANCESTRAL SPECIES 8 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Pomacentridae_A ANCESTRAL SPECIES 50 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Amphiprion ANCESTRAL SPECIES ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000155191.a.b.e ENSGT00940000158244 ENSGT00940000155191.a.b.f ENSGT00940000166257 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Orange clownfish MODERN SPECIES 17 cyp2u1 (ENSAPEG00000014152) sgms2a (ENSAPEG00000014163) papss1 (ENSAPEG00000014192) dkk2 (ENSAPEG00000014294) aimp1a (ENSAPEG00000014340) ENSAPEG00000014357 tbck (ENSAPEG00000014390) ENSAPEG00000014507 npnta (ENSAPEG00000014564) gstcd (ENSAPEG00000014596) ints12 (ENSAPEG00000014691) ARHGEF38 (ENSAPEG00000014720) ppa2 (ENSAPEG00000014741) TET2 (ENSAPEG00000014776) CXXC4 (ENSAPEG00000014788) ENSAPEG00000014816 ##22 mtap (ENSAPEG00000014831) ENSAPEG00000014913 ndufb6 (ENSAPEG00000014933) ENSAPEG00000014968 MXD4 (ENSAPEG00000014985) ENSAPEG00000015085 ENSAPEG00000015113 pdcd4a (ENSAPEG00000015119) mogs (ENSAPEG00000015158) ENSAPEG00000015164 ENSAPEG00000015192 FBXO41 (ENSAPEG00000015217) smox (ENSAPEG00000015299) rnf24 (ENSAPEG00000015332) ccdc86 (ENSAPEG00000015364) Clown anemonefish MODERN SPECIES 2272 ENSAOCG00000016182 ##22 mtap (ENSAOCG00000016197) Spiny chromis MODERN SPECIES 165 tbck (ENSAPOG00000017549) ENSAPOG00000017670 npnta (ENSAPOG00000017724) gstcd (ENSAPOG00000017740) ints12 (ENSAPOG00000017789) ARHGEF38 (ENSAPOG00000017853) ppa2 (ENSAPOG00000017862) TET2 (ENSAPOG00000017873) CXXC4 (ENSAPOG00000017882) ENSAPOG00000018007 ##22 mtap (ENSAPOG00000018020) toporsa (ENSAPOG00000018033) ndufb6 (ENSAPOG00000018058) ENSAPOG00000018065 MXD4 (ENSAPOG00000018104) ENSAPOG00000018114 pdcd4a (ENSAPOG00000018171) mogs (ENSAPOG00000018201) ENSAPOG00000018206 Bicolor damselfish MODERN SPECIES 247 hadh (ENSSPAG00000001343) cyp2u1 (ENSSPAG00000001313) sgms2a (ENSSPAG00000001299) papss1 (ENSSPAG00000001237) dkk2 (ENSSPAG00000001202) aimp1a (ENSSPAG00000001190) tbck (ENSSPAG00000001072) ENSSPAG00000001003 npnta (ENSSPAG00000000947) gstcd (ENSSPAG00000000887) ints12 (ENSSPAG00000000842) ARHGEF38 (ENSSPAG00000000823) ppa2 (ENSSPAG00000000769) TET2 (ENSSPAG00000000762) CXXC4 (ENSSPAG00000000755) ENSSPAG00000000749 ##22 mtap (ENSSPAG00000000720) toporsa (ENSSPAG00000000710) ndufb6 (ENSSPAG00000000708) ENSSPAG00000000702 MXD4 (ENSSPAG00000000669) ENSSPAG00000000631 pdcd4a (ENSSPAG00000000564) mogs (ENSSPAG00000000550) ENSSPAG00000000514 FBXO41 (ENSSPAG00000000451) smox (ENSSPAG00000000407) rnf24 (ENSSPAG00000000388) ccdc86 (ENSSPAG00000000367) glb1 (ENSSPAG00000000283) cldnd1b (ENSSPAG00000000273) Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000155191.a.b ENSGT00940000166257.l ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000155191.a.b ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Carangaria ANCESTRAL SPECIES ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Carangaria_A ANCESTRAL SPECIES 14 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Seriola ANCESTRAL SPECIES 18 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Greater amberjack MODERN SPECIES 177 hadh (ENSSDUG00000001972) cyp2u1 (ENSSDUG00000001985) sgms2a (ENSSDUG00000001995) papss1 (ENSSDUG00000002013) dkk2 (ENSSDUG00000002053) aimp1a (ENSSDUG00000002067) tbck (ENSSDUG00000002100) ENSSDUG00000002209 npnta (ENSSDUG00000002246) gstcd (ENSSDUG00000002259) ints12 (ENSSDUG00000002296) ARHGEF38 (ENSSDUG00000002327) ppa2 (ENSSDUG00000002358) TET2 (ENSSDUG00000002400) CXXC4 (ENSSDUG00000002428) ENSSDUG00000002474 ##22 mtap (ENSSDUG00000002444) toporsa (ENSSDUG00000002479) ndufb6 (ENSSDUG00000002492) ENSSDUG00000002503 MXD4 (ENSSDUG00000002525) ENSSDUG00000002559 pdcd4a (ENSSDUG00000002569) mogs (ENSSDUG00000002586) ENSSDUG00000002596 FBXO41 (ENSSDUG00000002624) smox (ENSSDUG00000002647) rnf24 (ENSSDUG00000002677) ccdc86 (ENSSDUG00000002689) glb1 (ENSSDUG00000002705) cldnd1b (ENSSDUG00000002758) Yellowtail amberjack MODERN SPECIES 3148 npnta (ENSSLDG00000015986) gstcd (ENSSLDG00000016058) ints12 (ENSSLDG00000016079) ARHGEF38 (ENSSLDG00000016109) ppa2 (ENSSLDG00000016160) TET2 (ENSSLDG00000016203) CXXC4 (ENSSLDG00000016233) ENSSLDG00000016251 ##22 mtap (ENSSLDG00000016274) toporsa (ENSSLDG00000016304) ndufb6 (ENSSLDG00000016336) ENSSLDG00000016441 MXD4 (ENSSLDG00000016474) ENSSLDG00000016518 pdcd4a (ENSSLDG00000016547) mogs (ENSSLDG00000016577) ENSSLDG00000016589 FBXO41 (ENSSLDG00000016603) smox (ENSSLDG00000016629) rnf24 (ENSSLDG00000016659) ccdc86 (ENSSLDG00000016681) glb1 (ENSSLDG00000016709) cldnd1b (ENSSLDG00000016766) Barramundi perch MODERN SPECIES 108 npnta (ENSLCAG00010003679) gstcd (ENSLCAG00010003667) ints12 (ENSLCAG00010003664) ARHGEF38 (ENSLCAG00010003661) ppa2 (ENSLCAG00010003653) TET2 (ENSLCAG00010003648) CXXC4 (ENSLCAG00010003647) ENSLCAG00010003644 ##22 mtap (ENSLCAG00010003637) toporsa (ENSLCAG00010003631) ndufb6 (ENSLCAG00010003621) ENSLCAG00010003620 MXD4 (ENSLCAG00010003619) ENSLCAG00010003618 pdcd4a (ENSLCAG00010003617) mogs (ENSLCAG00010003611) ENSLCAG00010003608 FBXO41 (ENSLCAG00010003601) smox (ENSLCAG00010003596) rnf24 (ENSLCAG00010003590) ccdc86 (ENSLCAG00010003587) glb1 (ENSLCAG00010003565) cldnd1b (ENSLCAG00010003535) Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000155191.a.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Turbot MODERN SPECIES 20 sgms2a (ENSSMAG00000006951) papss1 (ENSSMAG00000006962) papss1 (ENSSMAG00000037785) dkk2 (ENSSMAG00000021635) aimp1a (ENSSMAG00000007003) tbck (ENSSMAG00000007041) ENSSMAG00000007192 npnta (ENSSMAG00000007216) gstcd (ENSSMAG00000007270) ints12 (ENSSMAG00000037653) ARHGEF38 (ENSSMAG00000007336) ppa2 (ENSSMAG00000007385) TET2 (ENSSMAG00000007440) CXXC4 (ENSSMAG00000007457) MTAP (ENSSMAG00000007466) ENSSMAG00000007513 ##22 toporsa (ENSSMAG00000036294) ndufb6 (ENSSMAG00000027350) ENSSMAG00000021763 ENSSMAG00000021849 ENSSMAG00000035496 pdcd4a (ENSSMAG00000007600) ENSSMAG00000007622 ENSSMAG00000035850 ENSSMAG00000007636 ENSSMAG00000007664 ENSSMAG00000037779 ccdc86 (ENSSMAG00000007686) glb1 (ENSSMAG00000007700) cldnd1b (ENSSMAG00000007739) acy3.2 (ENSSMAG00000007777) Tongue sole MODERN SPECIES 19 lyg (ENSCSEG00000003415) pglyrp2 (ENSCSEG00000003407) mcoln1a (ENSCSEG00000003399) ENSCSEG00000003396 si:ch211-214c7.5 (ENSCSEG00000003389) PKN1 (ENSCSEG00000003377) map2k7 (ENSCSEG00000003367) myh9a (ENSCSEG00000003348) septin9b (ENSCSEG00000002994) ENSCSEG00000002990 jpt1a (ENSCSEG00000002985) ENSCSEG00000002981 gga3a (ENSCSEG00000002975) ENSCSEG00000002972 ENSCSEG00000002952 ENSCSEG00000002949 ##22 mtap (ENSCSEG00000002945) toporsa (ENSCSEG00000002942) ndufb6 (ENSCSEG00000002941) ENSCSEG00000002935 MXD4 (ENSCSEG00000002920) ENSCSEG00000002916 pdcd4a (ENSCSEG00000002907) mogs (ENSCSEG00000002903) ENSCSEG00000002900 FBXO41 (ENSCSEG00000002892) smox (ENSCSEG00000002886) ENSCSEG00000002878 rnf24 (ENSCSEG00000002874) sh3d19 (ENSCSEG00000002865) rps3a (ENSCSEG00000002859) Anabantaria ANCESTRAL SPECIES 1 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000166257.l ENSGT00940000155191.a.b ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Zig-zag eel MODERN SPECIES aimp1a (ENSMAMG00000015765) tbck (ENSMAMG00000015786) ENSMAMG00000015817 ENSMAMG00000015825 ENSMAMG00000015835 ENSMAMG00000015849 ENSMAMG00000015865 ENSMAMG00000026065 npnta (ENSMAMG00000015897) gstcd (ENSMAMG00000015934) ints12 (ENSMAMG00000015954) ARHGEF38 (ENSMAMG00000015977) ppa2 (ENSMAMG00000015994) TET2 (ENSMAMG00000016030) CXXC4 (ENSMAMG00000016055) ENSMAMG00000016061 ##22 mtap (ENSMAMG00000016067) toporsa (ENSMAMG00000027906) ndufb6 (ENSMAMG00000016099) ENSMAMG00000016106 ENSMAMG00000016130 ENSMAMG00000025965 pdcd4a (ENSMAMG00000016154) ENSMAMG00000016228 ENSMAMG00000016247 ENSMAMG00000016263 ENSMAMG00000016302 ENSMAMG00000016362 ccdc86 (ENSMAMG00000016395) glb1 (ENSMAMG00000016412) cldnd1b (ENSMAMG00000025325) Anabantoidei ANCESTRAL SPECIES ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000155191.a.b ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Climbing perch MODERN SPECIES tbck (ENSATEG00000015402) ENSATEG00000015801 ENSATEG00000015678 ENSATEG00000015847 ENSATEG00000026770 ENSATEG00000025691 ENSATEG00000015731 ENSATEG00000015877 npnta (ENSATEG00000015897) gstcd (ENSATEG00000015949) ints12 (ENSATEG00000015968) ARHGEF38 (ENSATEG00000015986) ppa2 (ENSATEG00000016014) TET2 (ENSATEG00000016078) CXXC4 (ENSATEG00000029220) ENSATEG00000026020 ##22 mtap (ENSATEG00000016127) toporsa (ENSATEG00000016155) ndufb6 (ENSATEG00000016167) ENSATEG00000016177 ENSATEG00000025798 ENSATEG00000028239 pdcd4a (ENSATEG00000016227) ENSATEG00000016256 ENSATEG00000025587 ENSATEG00000016294 ENSATEG00000016354 ENSATEG00000028295 ccdc86 (ENSATEG00000016386) glb1 (ENSATEG00000016398) cldnd1b (ENSATEG00000016463) Siamese fighting fish MODERN SPECIES gstcd (ENSBSLG00000000001) ints12 (ENSBSLG00000000002) ARHGEF38 (ENSBSLG00000000003) ppa2 (ENSBSLG00000000004) TET2 (ENSBSLG00000000005) CXXC4 (ENSBSLG00000000006) ENSBSLG00000000007 ##22 mtap (ENSBSLG00000000008) toporsa (ENSBSLG00000000009) ndufb6 (ENSBSLG00000000010) ENSBSLG00000000011 MXD4 (ENSBSLG00000000012) ENSBSLG00000000013 pdcd4a (ENSBSLG00000000014) mogs (ENSBSLG00000000015) ENSBSLG00000000016 FBXO41 (ENSBSLG00000000018) smox (ENSBSLG00000000019) rnf24 (ENSBSLG00000000020) ccdc86 (ENSBSLG00000000021) glb1 (ENSBSLG00000000022) cldnd1b (ENSBSLG00000000023) Eupercaria ANCESTRAL SPECIES 2 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b ENSGT00940000155191.a.b ENSGT00940000166257.l ENSGT00940000161510 ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.c.b ENSGT00940000161510.bb.b.a ENSGT00940000156796.c.a.e.b.c.a ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Perciformes ANCESTRAL SPECIES 2 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Perciformes_a ANCESTRAL SPECIES ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00940000161510.bb.b.b ENSGT00940000166257.l Pike perch MODERN SPECIES 45 hadh (ENSSLUG00000002585) cyp2u1 (ENSSLUG00000002524) sgms2a (ENSSLUG00000002502) papss1 (ENSSLUG00000002199) ENSSLUG00000002143 dkk2 (ENSSLUG00000002133) aimp1a (ENSSLUG00000002129) tbck (ENSSLUG00000002020) npnta (ENSSLUG00000001853) gstcd (ENSSLUG00000001775) ints12 (ENSSLUG00000001767) ARHGEF38 (ENSSLUG00000001753) ppa2 (ENSSLUG00000001711) TET2 (ENSSLUG00000001662) CXXC4 (ENSSLUG00000001615) ENSSLUG00000001607 ##22 mtap (ENSSLUG00000001591) toporsa (ENSSLUG00000001568) ndufb6 (ENSSLUG00000001563) ENSSLUG00000001552 MXD4 (ENSSLUG00000022882) ENSSLUG00000022880 pdcd4a (ENSSLUG00000022461) mogs (ENSSLUG00000022415) ENSSLUG00000022409 FBXO41 (ENSSLUG00000022315) smox (ENSSLUG00000022282) rnf24 (ENSSLUG00000022273) ccdc86 (ENSSLUG00000022261) ENSSLUG00000022234 glb1 (ENSSLUG00000022133) Channel bull blenny MODERN SPECIES ENSCGOG00000013353 cyp2u1 (ENSCGOG00000013287) sgms2a (ENSCGOG00000013284) papss1 (ENSCGOG00000011408) dkk2 (ENSCGOG00000011331) aimp1a (ENSCGOG00000011329) tbck (ENSCGOG00000010212) ENSCGOG00000010181 ENSCGOG00000010068 ENSCGOG00000010061 npnta (ENSCGOG00000010047) gstcd (ENSCGOG00000010034) ints12 (ENSCGOG00000010030) ARHGEF38 (ENSCGOG00000010026) TET2 (ENSCGOG00000010016) ENSCGOG00000010014 ##22 ENSCGOG00000010013 mtap (ENSCGOG00000009991) toporsa (ENSCGOG00000009987) ndufb6 (ENSCGOG00000009974) ENSCGOG00000009962 ENSCGOG00000009938 pin1 (ENSCGOG00000009932) UBL5 (ENSCGOG00000009925) VAV1 (ENSCGOG00000006018) ENSCGOG00000005950 TRIP10 (ENSCGOG00000005926) ENSCGOG00000005793 ENSCGOG00000005785 olfm2b (ENSCGOG00000005782) ENSCGOG00000005777 Cottioidei ANCESTRAL SPECIES 3 ENSGT00940000166803 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000161510.bb.b.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.d ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Lumpfish MODERN SPECIES ENSCLMG00005012061 cyp2u1 (ENSCLMG00005012060) sgms2a (ENSCLMG00005012059) papss1 (ENSCLMG00005011263) dkk2 (ENSCLMG00005011258) aimp1a (ENSCLMG00005011257) tbck (ENSCLMG00005011152) ENSCLMG00005011149 npnta (ENSCLMG00005011142) gstcd (ENSCLMG00005011131) ints12 (ENSCLMG00005011129) ARHGEF38 (ENSCLMG00005011127) ppa2 (ENSCLMG00005011126) TET2 (ENSCLMG00005011122) CXXC4 (ENSCLMG00005011121) ENSCLMG00005011120 ##22 mtap (ENSCLMG00005011119) toporsa (ENSCLMG00005011102) ndufb6 (ENSCLMG00005011099) ENSCLMG00005011096 MXD4 (ENSCLMG00005011094) ENSCLMG00005011090 pdcd4a (ENSCLMG00005010420) mogs (ENSCLMG00005010414) ENSCLMG00005010413 FBXO41 (ENSCLMG00005010412) smox (ENSCLMG00005010410) rnf24 (ENSCLMG00005010409) ccdc86 (ENSCLMG00005010408) ENSCLMG00005010407 glb1 (ENSCLMG00005007796) Stickleback MODERN SPECIES 4 lef1 (ENSGACG00000017458) cyp2u1 (ENSGACG00000017462) sgms2a (ENSGACG00000017492) papss1 (ENSGACG00000017494) dkk2 (ENSGACG00000017496) aimp1a (ENSGACG00000017501) tbck (ENSGACG00000017502) npnta (ENSGACG00000017519) gstcd (ENSGACG00000017529) ints12 (ENSGACG00000017536) ARHGEF38 (ENSGACG00000017541) ENSGACG00000017545 ppa2 (ENSGACG00000017548) ENSGACG00000017550 CXXC4 (ENSGACG00000017555) ENSGACG00000017556 ##22 mtap (ENSGACG00000017558) toporsa (ENSGACG00000017571) ndufb6 (ENSGACG00000017573) ENSGACG00000017579 MXD4 (ENSGACG00000017587) ENSGACG00000017596 pdcd4a (ENSGACG00000017601) mogs (ENSGACG00000017608) ENSGACG00000017610 ENSGACG00000017612 FBXO41 (ENSGACG00000017614) smox (ENSGACG00000017615) rnf24 (ENSGACG00000017626) ccdc86 (ENSGACG00000017630) glb1 (ENSGACG00000017633) Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.c.b ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.e.b.c.b ENSGT00940000161510.bb.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b European seabass MODERN SPECIES 20 HADH (ENSDLAG00005009678) cyp2u1 (ENSDLAG00005009666) papss1 (ENSDLAG00005009340) dkk2 (ENSDLAG00005009325) SGMS2 (ENSDLAG00005009658) aimp1a (ENSDLAG00005009303) tbck (ENSDLAG00005009196) ENSDLAG00005008986 npnta (ENSDLAG00005008770) gstcd (ENSDLAG00005008704) ints12 (ENSDLAG00005008683) ARHGEF38 (ENSDLAG00005008659) ppa2 (ENSDLAG00005008369) TET2 (ENSDLAG00005008342) CXXC4 (ENSDLAG00005029513) ENSDLAG00005030819 ##22 mtap (ENSDLAG00005008314) toporsa (ENSDLAG00005008307) ENSDLAG00005008270 ENSDLAG00005008245 pdcd4a (ENSDLAG00005008050) ENSDLAG00005008019 ENSDLAG00005008012 ENSDLAG00005007927 ENSDLAG00005007908 ENSDLAG00005007892 ccdc86 (ENSDLAG00005007882) ENSDLAG00005007722 glb1 (ENSDLAG00005007299) cldnd1b (ENSDLAG00005007263) acy3.2 (ENSDLAG00005007253) Large yellow croaker MODERN SPECIES 481 papss1 (ENSLCRG00005005706) dkk2 (ENSLCRG00005005694) aimp1a (ENSLCRG00005005691) tbck (ENSLCRG00005005651) ENSLCRG00005005622 ENSLCRG00005005621 ENSLCRG00005005565 npnta (ENSLCRG00005005549) gstcd (ENSLCRG00005005544) ints12 (ENSLCRG00005005541) ARHGEF38 (ENSLCRG00005005538) ppa2 (ENSLCRG00005005537) TET2 (ENSLCRG00005005534) CXXC4 (ENSLCRG00005005531) ENSLCRG00005005525 ENSLCRG00005005522 ##22 toporsa (ENSLCRG00005005521) MTAP (ENSLCRG00005005520) ndufb6 (ENSLCRG00005005518) ENSLCRG00005005514 ndufb6 (ENSLCRG00005005513) ENSLCRG00005005512 MXD4 (ENSLCRG00005005511) ENSLCRG00005005504 pdcd4a (ENSLCRG00005005060) mogs (ENSLCRG00005005058) ENSLCRG00005005057 FBXO41 (ENSLCRG00005005055) smox (ENSLCRG00005005051) rnf24 (ENSLCRG00005005050) ccdc86 (ENSLCRG00005005049) Gilthead seabream MODERN SPECIES papss1 (ENSSAUG00010017671) dkk2 (ENSSAUG00010018482) aimp1a (ENSSAUG00010018483) tbck (ENSSAUG00010018488) ENSSAUG00010018531 ENSSAUG00010018540 ENSSAUG00010018544 npnta (ENSSAUG00010018549) gstcd (ENSSAUG00010018641) ints12 (ENSSAUG00010018684) ARHGEF38 (ENSSAUG00010018687) ppa2 (ENSSAUG00010018692) TET2 (ENSSAUG00010018703) CXXC4 (ENSSAUG00010018707) ENSSAUG00010018710 ENSSAUG00010018712 ##22 mtap (ENSSAUG00010018714) toporsa (ENSSAUG00010018715) NDUFB6 (ENSSAUG00010018717) ENSSAUG00010018719 MXD4 (ENSSAUG00010018724) ENSSAUG00010018725 pdcd4a (ENSSAUG00010018727) mogs (ENSSAUG00010018731) ENSSAUG00010018733 FBXO41 (ENSSAUG00010018737) smox (ENSSAUG00010018768) rnf24 (ENSSAUG00010018772) ENSSAUG00010018774 ENSSAUG00010018775 ENSSAUG00010018778 Tetraodontidae ANCESTRAL SPECIES 16 ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a.c ENSGT00940000158244 ENSGT00940000156796.c.a.f ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000157511 ENSGT00940000159443 ENSGT00390000017281 ENSGT00950000182942.a.a ENSGT00390000002596.b Fugu MODERN SPECIES 8 hadh (ENSTRUG00000025695) cyp2u1 (ENSTRUG00000008392) sgms2a (ENSTRUG00000008227) papss1 (ENSTRUG00000007964) dkk2 (ENSTRUG00000020351) aimp1a (ENSTRUG00000007708) tbck (ENSTRUG00000007131) ALOXE3 (ENSTRUG00000006230) npnta (ENSTRUG00000005796) gstcd (ENSTRUG00000005592) ints12 (ENSTRUG00000005424) ARHGEF38 (ENSTRUG00000021868) ppa2 (ENSTRUG00000004694) TET2 (ENSTRUG00000025759) CXXC4 (ENSTRUG00000004403) ENSTRUG00000029442 ##22 mtap (ENSTRUG00000003933) toporsa (ENSTRUG00000030740) ndufb6 (ENSTRUG00000003741) ENSTRUG00000003472 MXD4 (ENSTRUG00000003046) ENSTRUG00000027358 pdcd4a (ENSTRUG00000002085) mogs (ENSTRUG00000021233) ENSTRUG00000023783 FBXO41 (ENSTRUG00000001696) smox (ENSTRUG00000001507) rnf24 (ENSTRUG00000026769) ccdc86 (ENSTRUG00000024101) glb1 (ENSTRUG00000017533) cldnd1b (ENSTRUG00000017545) Pinecone sodierfish MODERN SPECIES hadh (ENSMMDG00005008710) cyp2u1 (ENSMMDG00005008716) sgms2a (ENSMMDG00005008725) papss1 (ENSMMDG00005008865) dkk2 (ENSMMDG00005009215) aimp1a (ENSMMDG00005009224) tbck (ENSMMDG00005009260) ENSMMDG00005009508 npnta (ENSMMDG00005009661) gstcd (ENSMMDG00005009941) ints12 (ENSMMDG00005009945) ARHGEF38 (ENSMMDG00005009949) ppa2 (ENSMMDG00005009960) TET2 (ENSMMDG00005009989) CXXC4 (ENSMMDG00005009998) ENSMMDG00005010005 ##22 mtap (ENSMMDG00005010028) toporsa (ENSMMDG00005010031) ndufb6 (ENSMMDG00005010032) ENSMMDG00005010033 MXD4 (ENSMMDG00005010036) pdcd4a (ENSMMDG00005010043) mogs (ENSMMDG00005010354) ENSMMDG00005010356 FBXO41 (ENSMMDG00005010359) smox (ENSMMDG00005010364) rnf24 (ENSMMDG00005010369) ccdc86 (ENSMMDG00005010377) glb1 (ENSMMDG00005010412) cldnd1b (ENSMMDG00005010591) acy3.2 (ENSMMDG00005010599) Cod MODERN SPECIES 16 hadh (ENSGMOG00000017363) cyp2u1 (ENSGMOG00000017507) sgms2a (ENSGMOG00000017521) papss1 (ENSGMOG00000017531) dkk2 (ENSGMOG00000032641) aimp1a (ENSGMOG00000017576) tbck (ENSGMOG00000017587) npnta (ENSGMOG00000035197) gstcd (ENSGMOG00000017674) ints12 (ENSGMOG00000017716) ARHGEF38 (ENSGMOG00000017732) ENSGMOG00000017772 ppa2 (ENSGMOG00000017788) TET2 (ENSGMOG00000033378) CXXC4 (ENSGMOG00000019812) ENSGMOG00000035660 ##22 mtap (ENSGMOG00000017834) toporsa (ENSGMOG00000033137) ndufb6 (ENSGMOG00000035222) ENSGMOG00000017872 ENSGMOG00000035845 ENSGMOG00000028743 pdcd4a (ENSGMOG00000017926) ENSGMOG00000036085 ENSGMOG00000033162 ENSGMOG00000017980 ENSGMOG00000018004 ENSGMOG00000025312 ENSGMOG00000016242 ENSGMOG00000035231 ENSGMOG00000016198 Protacanthopterygii ANCESTRAL SPECIES 41 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244 ENSGT00940000161510 ENSGT00940000156796.c.a ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.b ENSGT00940000157146.a.b ENSGT00390000012030.b.b ENSGT00940000158380.b ENSGT00950000183079.A.b.c.a.a ENSGT00950000183012.B.b ENSGT00940000155777.b ENSGT00950000183026.A.a.a.b ENSGT00940000177791 Salmoninae ANCESTRAL SPECIES 112 ENSGT00940000157370.b ENSGT00390000009613.b ENSGT00940000164073.a ENSGT00940000154950.y.a ENSGT00940000158244.d ENSGT00940000161510 ENSGT00940000156796.c.a.a.a ENSGT00940000156796.c.a.a.b.b ENSGT00930000150973.B.e.b ENSGT00390000004446 ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B.i ENSGT00940000163496.a.u.a.b.a.b.b.a ENSGT00940000163496.a.u.b.b.b ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a.a ENSGT00940000160120.g.b ENSGT00970000197267 Salmoninae_a ANCESTRAL SPECIES 125 ENSGT00940000154108.b.a.a.d ENSGT00940000159801.A ##22 ENSGT00950000182991.B.i ENSGT00940000163496.a.u.a.b.a.b.b.a ENSGT00990000210912.b.b ENSGT00940000163496.a.u.a.b.b ENSGT00530000064170.c ENSGT00390000007535.w ENSGT00390000006684 ENSGT00950000182810.B.b.a.a.a ENSGT00940000160120.g.b ENSGT00940000157146.a.b.a.b ENSGT00390000012030.b.b ENSGT00940000158380.b.g ENSGT00950000183079.A.b.c.a.a.d.a ENSGT00950000183012.B.b.s.a.a ENSGT00940000155777.b.i Oncorhynchus ANCESTRAL SPECIES 159 ENSGT00940000154108.b.a.a.d ENSGT00940000159801.A ##22 ENSGT00950000182991.B.i ENSGT00990000210912.b.b ENSGT00940000163496.a.u.a.b.b ENSGT00530000064170.c ENSGT00390000007535.w ENSGT00390000006684 ENSGT00950000182810.B.b.a.a.a.c.a.a ENSGT00950000182810.B.b.a.a.a.d ENSGT00940000160120.g.a Oncorhynchus_a ANCESTRAL SPECIES 651 ENSGT00940000159801.A ##22 ENSGT00950000182991.B.i Coho salmon DUPLICATION Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1091 ENSOKIG00005024208 ##22 Coho salmon MODERN SPECIES 1088 ENSOKIG00005024111 ##22 Coho salmon MODERN SPECIES 36 ENSOKIG00005020268 ENSOKIG00005020221 mtmr7b (ENSOKIG00005020123) vps37a (ENSOKIG00005020041) MICU3 (ENSOKIG00005019975) fgf20a (ENSOKIG00005019962) tusc3 (ENSOKIG00005019816) ENSOKIG00005019802 SGCZ (ENSOKIG00005019783) ENSOKIG00005019780 ENSOKIG00005019744 ENSOKIG00005030535 MXD4 (ENSOKIG00005030515) ENSOKIG00005030468 ENSOKIG00005030441 ENSOKIG00005030413 ##22 mtap (ENSOKIG00005030355) ENSOKIG00005030342 ENSOKIG00005030234 ENSOKIG00005030106 toporsa (ENSOKIG00005030095) ndufb6 (ENSOKIG00005030085) TMEM215 (ENSOKIG00005030080) ENSOKIG00005030064 CXXC4 (ENSOKIG00005030041) TET2 (ENSOKIG00005030025) ppa2 (ENSOKIG00005029716) ARHGEF38 (ENSOKIG00005029680) ints12 (ENSOKIG00005029672) gstcd (ENSOKIG00005029422) npnta (ENSOKIG00005029265) Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 10 sgms2a (ENSOMYG00000037740) papss1 (ENSOMYG00000034731) dkk2 (ENSOMYG00000051355) ENSOMYG00000048001 aimp1a (ENSOMYG00000034432) tbck (ENSOMYG00000034169) ENSOMYG00000033919 npnta (ENSOMYG00000076789) gstcd (ENSOMYG00000033789) ints12 (ENSOMYG00000033775) ARHGEF38 (ENSOMYG00000033852) ppa2 (ENSOMYG00000033655) TET2 (ENSOMYG00000033566) ENSOMYG00000056668 CXXC4 (ENSOMYG00000033524) CDN2B (ENSOMYG00000033506) ##22 mtap (ENSOMYG00000007413) ENSOMYG00000007433 ENSOMYG00000007685 ENSOMYG00000008032 ENSOMYG00000066231 ENSOMYG00000076988 ENSOMYG00000007776 ENSOMYG00000053507 ENSOMYG00000060746 toporsa (ENSOMYG00000048315) ndufb6 (ENSOMYG00000007961) ENSOMYG00000007462 TMEM215 (ENSOMYG00000007856) ENSOMYG00000055435 ENSOMYG00000058437 Rainbow trout MODERN SPECIES 1 dkk2 (ENSOMYG00000054653) ENSOMYG00000072668 aimp1a (ENSOMYG00000009490) tbck (ENSOMYG00000050930) ENSOMYG00000009546 ENSOMYG00000034047 ENSOMYG00000039022 npnta (ENSOMYG00000066555) ENSOMYG00000071531 gstcd (ENSOMYG00000051845) ints12 (ENSOMYG00000051852) ARHGEF38 (ENSOMYG00000073829) ppa2 (ENSOMYG00000065994) TET2 (ENSOMYG00000072150) CXXC4 (ENSOMYG00000070664) CDN2B (ENSOMYG00000025290) ##22 mtap (ENSOMYG00000056424) ENSOMYG00000052378 ENSOMYG00000007751 ENSOMYG00000062713 ENSOMYG00000070070 ENSOMYG00000056740 ENSOMYG00000062005 ENSOMYG00000056033 ENSOMYG00000007995 toporsa (ENSOMYG00000007796) ndufb6 (ENSOMYG00000007802) TMEM215 (ENSOMYG00000053128) ENSOMYG00000056030 ENSOMYG00000009633 ENSOMYG00000009578 Salmo ANCESTRAL SPECIES 139 ENSGT00940000164073.a.c ENSGT00940000154950.y.a.j ENSGT00940000158244.d.b ENSGT00940000161510.jb ENSGT00940000156796.c.a.a.a.b.b ENSGT00940000156796.c.a.a.b.b ENSGT00930000150973.B.e.b.e ENSGT00390000004446.e ENSGT00390000005218.q ENSGT00950000183088.a.b.b.g.a ENSGT00390000017004.a.a.y ENSGT00940000160003.r ENSGT00940000154108.b.a.a.d ENSGT00940000159801.A ##22 ENSGT00950000182991.B.i ENSGT00940000163496.a.u.a.b.a.b.b.a.a ENSGT00940000163496.a.u.b.b.a.b.a ENSGT00990000210912.b.b ENSGT00940000163496.a.u.a.b.b ENSGT00530000064170.c.f ENSGT00390000007535.x ENSGT00390000006684 ENSGT00950000182810.B.b.a.a.b ENSGT00940000160120.g.a ENSGT00950000183109.d.e.b.d River trout DUPLICATION River trout MODERN SPECIES 2 sgms2a (ENSSTUG00000021710) papss1 (ENSSTUG00000021727) dkk2 (ENSSTUG00000022075) aimp1a (ENSSTUG00000022080) tbck (ENSSTUG00000022110) ENSSTUG00000022304 ENSSTUG00000022407 ENSSTUG00000022419 npnta (ENSSTUG00000022472) gstcd (ENSSTUG00000022711) ints12 (ENSSTUG00000022748) ARHGEF38 (ENSSTUG00000011944) ppa2 (ENSSTUG00000011955) TET2 (ENSSTUG00000012007) CXXC4 (ENSSTUG00000012019) ENSSTUG00000012032 ##22 mtap (ENSSTUG00000012045) ENSSTUG00000012125 ENSSTUG00000012135 toporsa (ENSSTUG00000012170) ndufb6 (ENSSTUG00000012184) ENSSTUG00000012202 MXD4 (ENSSTUG00000012211) ENSSTUG00000012230 ENSSTUG00000012236 ENSSTUG00000012252 ENSSTUG00000012260 ENSSTUG00000012280 ENSSTUG00000012284 SGCZ (ENSSTUG00000012294) vps37a (ENSSTUG00000012320) River trout MODERN SPECIES 33 cyp2u1 (ENSSTUG00000001920) sgms2a (ENSSTUG00000001916) papss1 (ENSSTUG00000001733) dkk2 (ENSSTUG00000001701) aimp1a (ENSSTUG00000001679) tbck (ENSSTUG00000001185) ENSSTUG00000001071 ENSSTUG00000000992 npnta (ENSSTUG00000000934) gstcd (ENSSTUG00000000924) ints12 (ENSSTUG00000000919) ARHGEF38 (ENSSTUG00000000914) ppa2 (ENSSTUG00000000900) TET2 (ENSSTUG00000000892) CXXC4 (ENSSTUG00000000886) ENSSTUG00000000880 ##22 mtap (ENSSTUG00000000865) ENSSTUG00000000845 ENSSTUG00000000761 ENSSTUG00000000726 ENSSTUG00000000717 ENSSTUG00000000713 ENSSTUG00000000707 ndufb6 (ENSSTUG00000000706) TMEM215 (ENSSTUG00000000704) ENSSTUG00000000700 MXD4 (ENSSTUG00000000692) ENSSTUG00000000689 ENSSTUG00000000688 ENSSTUG00000000667 ENSSTUG00000000659 Huchen DUPLICATION Huchen MODERN SPECIES 248 hnrnpm (ENSHHUG00000028579) ENSHHUG00000028530 marchf2 (ENSHHUG00000028524) rab11ba (ENSHHUG00000028501) PIP5K1C (ENSHHUG00000028497) GPX4 (ENSHHUG00000028495) POLR2E (ENSHHUG00000028434) ARHGAP45 (ENSHHUG00000028230) tjp3 (ENSHHUG00000028117) SBNO2 (ENSHHUG00000028050) ENSHHUG00000028044 tm6sf2b (ENSHHUG00000028021) hapln4 (ENSHHUG00000028013) ENSHHUG00000027999 ENSHHUG00000027993 ENSHHUG00000027978 ##22 mtap (ENSHHUG00000027929) ENSHHUG00000027927 ENSHHUG00000027926 ENSHHUG00000027917 ENSHHUG00000027906 ENSHHUG00000027904 ENSHHUG00000027900 toporsa (ENSHHUG00000027897) ndufb6 (ENSHHUG00000027885) ENSHHUG00000027880 MXD4 (ENSHHUG00000027877) Huchen MODERN SPECIES 2975 ENSHHUG00000046838 ##22 mtap (ENSHHUG00000046860) ENSHHUG00000046887 ENSHHUG00000046889 ENSHHUG00000046895 toporsa (ENSHHUG00000046952) ndufb6 (ENSHHUG00000046956) ENSHHUG00000046969 MXD4 (ENSHHUG00000046971) ENSHHUG00000046978 Otomorpha ANCESTRAL SPECIES 57 ENSGT00950000182907.a.b.a ENSGT00940000154737.d ENSGT00940000157398.j ENSGT00940000165650 ENSGT01060000249224 ENSGT00390000004643 ENSGT00950000182907.a.b.b.a ENSGT00940000155598.a ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.f ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00950000182934.a.a ENSGT00940000160795 Clupeiformes ANCESTRAL SPECIES 67 ENSGT00940000154706.rb.b ENSGT00390000005708 ENSGT00950000182917.a.a.a.b ENSGT00940000157887 ENSGT00390000008798.c ENSGT00940000155140 ENSGT00940000158059.g ENSGT00940000159660.j ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00390000006684 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.e.a ENSGT00390000015948.a ENSGT00390000017452 ENSGT00940000160184.c.b ENSGT00530000063713.b.a ENSGT00940000159443 ENSGT00940000157511 ENSGT00950000182934.a.a ENSGT00940000160795.h Atlantic herring MODERN SPECIES 14 TTC39B (ENSCHAG00000027842) dnajb14 (ENSCHAG00000027840) pla2g12a (ENSCHAG00000027839) casp6a (ENSCHAG00000027837) MCUB (ENSCHAG00000027836) lef1 (ENSCHAG00000027834) uso1 (ENSCHAG00000027828) g3bp2a (ENSCHAG00000027819) ints12 (ENSCHAG00000027817) ARHGEF38 (ENSCHAG00000027816) ppa2 (ENSCHAG00000027813) TET2 (ENSCHAG00000027812) CXXC4 (ENSCHAG00000027811) ENSCHAG00000027810 ENSCHAG00000027809 ENSCHAG00000027807 ##22 mtap (ENSCHAG00000027806) toporsa (ENSCHAG00000027804) ndufb6 (ENSCHAG00000027802) TMEM215 (ENSCHAG00000027800) ENSCHAG00000027797 MXD4 (ENSCHAG00000027794) ENSCHAG00000027791 pdcd4a (ENSCHAG00000027780) mogs (ENSCHAG00000027770) ENSCHAG00000027769 FBXO41 (ENSCHAG00000027768) rnf24 (ENSCHAG00000027767) smox (ENSCHAG00000027766) ENSCHAG00000027764 ADRA1D (ENSCHAG00000027763) Denticle herring MODERN SPECIES 14 bnc2 (ENSDCDG00000011112) PSIP1 (ENSDCDG00000011122) snapc3 (ENSDCDG00000011135) TTC39B (ENSDCDG00000011186) pla2g12a (ENSDCDG00000011320) casp6a (ENSDCDG00000011336) MCUB (ENSDCDG00000011350) lef1 (ENSDCDG00000011390) uso1 (ENSDCDG00000011611) g3bp2a (ENSDCDG00000011741) ints12 (ENSDCDG00000011750) ARHGEF38 (ENSDCDG00000011752) ppa2 (ENSDCDG00000011763) TET2 (ENSDCDG00000011781) CXXC4 (ENSDCDG00000011791) ENSDCDG00000011797 ##22 mtap (ENSDCDG00000011804) toporsa (ENSDCDG00000011809) ndufb6 (ENSDCDG00000011811) ENSDCDG00000011817 MXD4 (ENSDCDG00000011828) ENSDCDG00000011836 pdcd4a (ENSDCDG00000012023) mogs (ENSDCDG00000014136) ENSDCDG00000014149 FBXO41 (ENSDCDG00000014169) ENSDCDG00000014218 rnf24 (ENSDCDG00000014225) smox (ENSDCDG00000014244) ENSDCDG00000014254 ENSDCDG00000014260 Otophysi ANCESTRAL SPECIES 227 ENSGT00390000005844.a.b ENSGT00440000034932 ENSGT00940000160529 ENSGT00940000165650 ENSGT01060000249224 ENSGT00390000004643 ENSGT00950000182907.a.b.b.a ENSGT00940000155598.a ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.f ENSGT00390000015948.a Cyprinoidei ANCESTRAL SPECIES 147 ENSGT00440000034932 ENSGT00940000160529 ENSGT00940000165650.b ENSGT01060000249224.a ENSGT00390000004643 ENSGT00940000179752 ENSGT00950000182907.a.b.b.a.c ENSGT00940000155598.a ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 ENSGT00950000183088.a.b.b ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a.h ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00940000160120.i ENSGT00390000015948.a.h Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 15 ENSGT00440000034932 ENSGT00940000160529.e.a ENSGT00940000165650.b ENSGT01060000249224.a ENSGT00390000004643 ENSGT00940000179752 ENSGT00950000182907.a.b.b.a.c ENSGT00940000155598.a.a ENSGT00390000017018.b.e ENSGT00390000011365.b.w.a ENSGT00390000005218.u ENSGT00950000183088.a.b.b.c ENSGT00390000017004.a.a.w ENSGT00940000160003.k ENSGT00940000154108.b.a.a.h.a.a ENSGT00940000159801.A.k ##22 ENSGT00950000182991.B.k ENSGT00530000064170.c ENSGT00390000007535 ENSGT00940000160120.i ENSGT00390000015948.a.h ENSGT00940000158985.r.a.a ENSGT00950000183054.a.a.a.b ENSGT00950000183027.b.a.g ENSGT00940000156337.d.g ENSGT00800000124172.j.g ENSGT00940000157483.h ENSGT00940000158285.a ENSGT00730000111184.h ENSGT00940000155973.b.d.c ENSGT00940000165274.b Cyprininae_a ANCESTRAL SPECIES 48 ENSGT00940000165650.b ENSGT00400000022377 ENSGT01060000249224.a ENSGT00390000004643.a ENSGT00940000179752 ENSGT00390000004643.b ENSGT00950000182907.a.b.b.a.c ENSGT00940000155598.a.a ENSGT00390000017018.b.e ENSGT00390000011365.b.w.a ENSGT00390000005218.u ENSGT00950000183088.a.b.b.c ENSGT00390000017004.a.a.w ENSGT00940000160003.k ENSGT00940000154108.b.a.a.h.a.a ENSGT00940000159801.A.k ##22 ENSGT00950000182991.B.k ENSGT00530000064170.c ENSGT00390000007535 ENSGT00940000160120.i ENSGT00390000015948.a.h ENSGT00940000158985.r.a.a ENSGT00950000183054.a.a.a.b ENSGT00950000183027.b.a.g ENSGT00940000156337.d.g ENSGT00800000124172.j.g ENSGT00940000157483.h ENSGT00940000158285.a ENSGT00730000111184.h ENSGT00940000155973.b.d.c ENSGT00940000165274.b Golden-line barbel MODERN SPECIES 195 ENSSGRG00000018414 sh3gl2a (ENSSGRG00000018412) ENSSGRG00000018411 ENSSGRG00000018409 trmo (ENSSGRG00000018407) anp32b (ENSSGRG00000018405) coro2aa (ENSSGRG00000018385) uso1 (ENSSGRG00000017116) g3bp2a (ENSSGRG00000017096) ints12 (ENSSGRG00000017090) ARHGEF38 (ENSSGRG00000017089) ENSSGRG00000017087 ppa2 (ENSSGRG00000017069) TET2 (ENSSGRG00000017068) CXXC4 (ENSSGRG00000017067) ENSSGRG00000017066 ##22 mtap (ENSSGRG00000017064) toporsa (ENSSGRG00000017063) ndufb6 (ENSSGRG00000017062) MXD4 (ENSSGRG00000017061) pdcd4a (ENSSGRG00000016032) Common carp reference MODERN SPECIES 27 CNTLN (ENSCCRG00000071812) sh3gl2a (ENSCCRG00000018054) ENSCCRG00000018048 ENSCCRG00000018046 trmo (ENSCCRG00000018039) ENSCCRG00000058756 anp32b (ENSCCRG00000065775) coro2aa (ENSCCRG00000017420) uso1 (ENSCCRG00000080512) g3bp2a (ENSCCRG00000077865) ints12 (ENSCCRG00000060317) ARHGEF38 (ENSCCRG00000007531) ppa2 (ENSCCRG00000079658) TET2 (ENSCCRG00000032278) CXXC4 (ENSCCRG00000080504) ENSCCRG00000029426 ##22 mtap (ENSCCRG00000064877) toporsa (ENSCCRG00000029428) ndufb6 (ENSCCRG00000029430) ENSCCRG00000049296 pdcd4a (ENSCCRG00000029452) ENSCCRG00000073372 ENSCCRG00000032717 ENSCCRG00000014494 myoz2b (ENSCCRG00000053110) USP53 (ENSCCRG00000062895) fabp2 (ENSCCRG00000022310) gucy1b1 (ENSCCRG00000018176) gucy1a1 (ENSCCRG00000022620) map9 (ENSCCRG00000014516) NPY2R (ENSCCRG00000032091) Goldfish MODERN SPECIES 18 ENSCARG00000015342 ENSCARG00000015345 sh3gl2a (ENSCARG00000015356) ENSCARG00000015387 ENSCARG00000015408 trmo (ENSCARG00000015481) anp32b (ENSCARG00000015489) coro2aa (ENSCARG00000015502) uso1 (ENSCARG00000015730) g3bp2a (ENSCARG00000020059) ints12 (ENSCARG00000020069) ARHGEF38 (ENSCARG00000020086) ppa2 (ENSCARG00000020119) TET2 (ENSCARG00000020143) CXXC4 (ENSCARG00000020194) ENSCARG00000020196 ##22 mtap (ENSCARG00000020223) ENSCARG00000020442 ndufb6 (ENSCARG00000020452) MXD4 (ENSCARG00000020471) pdcd4a (ENSCARG00000020525) ENSCARG00000021825 ENSCARG00000021835 myoz2b (ENSCARG00000021887) USP53 (ENSCARG00000021907) fabp2 (ENSCARG00000021956) gucy1b1 (ENSCARG00000021964) gucy1a1 (ENSCARG00000021972) map9 (ENSCARG00000021999) lrata (ENSCARG00000022009) ZNF827 (ENSCARG00000022014) Cyprininae ANCESTRAL SPECIES 506 ENSGT00940000157358 ENSGT00390000005844.a.b.k ENSGT00940000160529.e.b ENSGT00940000165650.a ENSGT01060000249224.b ENSGT00950000182907.a.b.b.a.d ENSGT00940000155598.a.b ENSGT00390000017018.b.f ENSGT00390000005218.v ENSGT00950000183088.a.b.b.d ENSGT00390000017004.a.a.x ENSGT00940000160003.l ENSGT00940000154108.b.a.a.h.a.b ENSGT00940000159801.A.l ##22 ENSGT00950000182991.B.l ENSGT01030000235206 ENSGT00940000160120.j ENSGT00390000015948.a.g ENSGT00390000003292 ENSGT01030000234601.s ENSGT00940000158985.r.a.b Cyprininae_a ANCESTRAL SPECIES 138 ENSGT00940000157358 ENSGT00390000005844.a.b.k ENSGT00940000160529.e.b ENSGT00940000165650.a ENSGT01060000249224.b ENSGT00950000182907.a.b.b.a.d ENSGT00940000155598.a.b ENSGT00390000017018.b.f ENSGT00390000005218.v ENSGT00950000183088.a.b.b.d ENSGT00390000017004.a.a.x ENSGT00940000160003.l ENSGT00940000154108.b.a.a.h.a.b ENSGT00940000159801.A.l ##22 ENSGT00950000182991.B.l ENSGT00940000160120.j ENSGT00390000015948.a.g ENSGT00390000003292 ENSGT01030000234601.s ENSGT00940000158985.r.a.b ENSGT00950000183027.b.a.h ENSGT00940000156337.d.h ENSGT00800000124172.j.h ENSGT00940000157483.g ENSGT00940000158285.b ENSGT00730000111184.g ENSGT00940000155973.b.d.d ENSGT00510000047351.a.b ENSGT00940000158467.c Common carp reference MODERN SPECIES 22 ENSCCRG00000026082 ENSCCRG00000066728 bnc2 (ENSCCRG00000060278) ENSCCRG00000034912 ENSCCRG00000075811 ENSCCRG00000073510 ENSCCRG00000080685 ENSCCRG00000077314 ENSCCRG00000051556 ARHGEF38 (ENSCCRG00000032295) ppa2 (ENSCCRG00000032282) TET2 (ENSCCRG00000053289) CXXC4 (ENSCCRG00000056778) ENSCCRG00000054048 ##22 mtap (ENSCCRG00000069476) ENSCCRG00000072211 ENSCCRG00000021689 gpank1 (ENSCCRG00000021833) ENSCCRG00000000827 ENSCCRG00000079872 gucy1b1 (ENSCCRG00000022330) gucy1a1 (ENSCCRG00000028759) map9 (ENSCCRG00000028760) NPY2R (ENSCCRG00000014523) lrata (ENSCCRG00000049070) fgg (ENSCCRG00000060370) plrg1 (ENSCCRG00000049078) ENSCCRG00000026707 arfip1 (ENSCCRG00000026709) Golden-line barbel MODERN SPECIES 248 pspc1 (ENSSGRG00000013658) bnc2 (ENSSGRG00000013699) sh3gl2a (ENSSGRG00000013703) ENSSGRG00000013857 ENSSGRG00000013859 ENSSGRG00000013863 uso1 (ENSSGRG00000013866) ints12 (ENSSGRG00000013871) ARHGEF38 (ENSSGRG00000013872) ppa2 (ENSSGRG00000013873) TET2 (ENSSGRG00000013874) ENSSGRG00000013875 ENSSGRG00000013876 ##22 mtap (ENSSGRG00000013878) ENSSGRG00000013891 ENSSGRG00000013892 ENSSGRG00000013893 gpank1 (ENSSGRG00000013894) ENSSGRG00000013895 ENSSGRG00000013896 ENSSGRG00000013897 ENSSGRG00000013898 USP53 (ENSSGRG00000013899) fabp2 (ENSSGRG00000013900) fabp2 (ENSSGRG00000013901) gucy1b1 (ENSSGRG00000013911) gucy1a1 (ENSSGRG00000014282) map9 (ENSSGRG00000014284) Zebrafish MODERN SPECIES sh3gl2a (ENSDARG00000023600) ENSDARG00000079266 ENSDARG00000096554 trmo (ENSDARG00000037245) ENSDARG00000096667 anp32b (ENSDARG00000023330) coro2aa (ENSDARG00000005210) ENSDARG00000096665 uso1 (ENSDARG00000019581) g3bp2a (ENSDARG00000014790) ints12 (ENSDARG00000091678) ARHGEF38 (ENSDARG00000079377) ppa2 (ENSDARG00000009685) TET2 (ENSDARG00000076928) CXXC4 (ENSDARG00000077817) ENSDARG00000037262 ##22 mtap (ENSDARG00000037261) toporsa (ENSDARG00000037260) ndufb6 (ENSDARG00000037259) MXD4 (ENSDARG00000054031) pdcd4a (ENSDARG00000021702) gpank1 (ENSDARG00000053995) ENSDARG00000069998 ENSDARG00000116236 ENSDARG00000037256 ENSDARG00000077157 myoz2b (ENSDARG00000037266) USP53 (ENSDARG00000076499) fabp2 (ENSDARG00000006427) gucy1b1 (ENSDARG00000086790) gucy1a1 (ENSDARG00000013787) Characiphysae ANCESTRAL SPECIES 9 ENSGT00440000034932 ENSGT00940000160529 ENSGT00940000165650 ENSGT01060000249224 ENSGT00400000022377 ENSGT00390000004643 ENSGT00950000182907.a.b.b.a ENSGT00940000155598.a ENSGT00390000017018.b ENSGT00390000011365.b.w.a ENSGT00390000005218 ENSGT00950000183088.a.b.b.a ENSGT00390000017004.a.a ENSGT00940000160003 ENSGT00940000154108.b.a.a ENSGT00940000159801.A ##22 ENSGT00950000182991.B ENSGT00530000064170.c ENSGT00390000007535 ENSGT00950000182810.B.b.a.a ENSGT00940000160120 ENSGT00950000183109.d.f ENSGT00390000015948.a Channel catfish MODERN SPECIES 22 ENSIPUG00000001789 ENSIPUG00000001792 spag5 (ENSIPUG00000001799) trmo (ENSIPUG00000001813) ANP32B (ENSIPUG00000001821) coro2aa (ENSIPUG00000001829) uso1 (ENSIPUG00000001856) ints12 (ENSIPUG00000001904) ARHGEF38 (ENSIPUG00000001917) ENSIPUG00000001941 ENSIPUG00000001942 ENSIPUG00000001952 ppa2 (ENSIPUG00000001962) tet2 (ENSIPUG00000001983) cxxc4 (ENSIPUG00000001990) ENSIPUG00000001996 ##22 mtap (ENSIPUG00000002003) toporsa (ENSIPUG00000002021) ndufb6 (ENSIPUG00000002026) MXD4 (ENSIPUG00000002049) ENSIPUG00000002066 ENSIPUG00000002083 bnc2 (ENSIPUG00000002100) ENSIPUG00000002117 ENSIPUG00000002133 snapc3 (ENSIPUG00000002170) DNAJB14 (ENSIPUG00000002181) Pla2g12a (ENSIPUG00000002213) ENSIPUG00000002225 CASP6 (ENSIPUG00000002234) ZFP91 (ENSIPUG00000002257) Spotted gar MODERN SPECIES 670 ENSLOCG00000013538 ENSLOCG00000013532 sparcl1 (ENSLOCG00000013522) ENSLOCG00000013517 ENSLOCG00000013511 ENSLOCG00000013509 ENSLOCG00000013504 ENSLOCG00000013500 uso1 (ENSLOCG00000013485) g3bp2a (ENSLOCG00000013470) CDKL2 (ENSLOCG00000013464) ENSLOCG00000013461 pkd2 (ENSLOCG00000013447) abcg2a (ENSLOCG00000013438) ppm1kb (ENSLOCG00000013435) ENSLOCG00000013433 ##22 mtap (ENSLOCG00000013426) RIGI (ENSLOCG00000013422) toporsa (ENSLOCG00000017928) ndufb6 (ENSLOCG00000013412) TMEM215 (ENSLOCG00000017926) ENSLOCG00000013396 ptgr1.1 (ENSLOCG00000013391) txn (ENSLOCG00000013388) SVEP1 (ENSLOCG00000013366) ENSLOCG00000013359 ENSLOCG00000013356 ENSLOCG00000013352 ENSLOCG00000013350 smc2 (ENSLOCG00000013338) ecpas (ENSLOCG00000013324) Cyclostomata ANCESTRAL SPECIES ENSGT00940000159801.A ##22 Lamprey MODERN SPECIES 55 ENSPMAG00000000864 ENSPMAG00000000867 ENSPMAG00000000868 ##22 ENSPMAG00000000869 ENSPMAG00000000871 ENSPMAG00000000884 Hagfish MODERN SPECIES 559 cmasa (ENSEBUG00000012166) ENSEBUG00000016488 ENSEBUG00000009286 ENSEBUG00000015461 ##22 ENSEBUG00000007587 ENSEBUG00000004006 ENSEBUG00000014541